{
 "encoder": "saprot",
 "family": "patched",
 "target": "saprot_hf",
 "weights": "pretrained",
 "rule": "final hidden states at the L residue positions of AA+3Di tokens",
 "env": "base",
 "checkpoint": "westlake-repl/SaProt_650M_AF2",
 "checkpoint_revision": "d9b9ad00ef61c0990e611b2b43f2231c7de24b38",
 "n_parameters": 651242901,
 "inputs_passed": "amino-acid track: real sequence; 3Di track: real tokens from mini3di on the structure; no pLDDT masking",
 "patch": "patched/saprot_hf.py",
 "task": "ec_classification",
 "date": "2026-09-20 12:22",
 "seconds": 386.3,
 "pooling": "masked mean over all residues of the chain",
 "manifest": "manifest/ec_classification.csv",
 "rows": "stage1 == 1",
 "structure_coverage": "every row has a structure file whose sequence equals the task sequence (see manifest/coverage.csv)",
 "n_per_split": {
  "test": 3000,
  "train": 6000,
  "valid": 1500
 },
 "health": {
  "n_rows": 10500,
  "dim": 1280,
  "nan_values": 0,
  "all_zero_rows": 0,
  "distinct_rows": 10460,
  "numerical_rank": 1279,
  "max_abs": 1.4501705169677734
 },
 "input_audit": {
  "rel_change_jitter_1A": 0.8705030813272382,
  "rel_change_coord_swap": 0.4102216970171252,
  "rel_change_seq_shuffle": 0.8413755808217256,
  "rel_change_rigid_motion": 0.0,
  "verdict": "pass"
 }
}