aiohappyeyeballs==2.6.1 aiohttp==3.12.15 aiosignal==1.4.0 annotated-types==0.7.0 antlr4-python3-runtime==4.9.3 anyio==4.10.0 argon2-cffi==25.1.0 argon2-cffi-bindings==25.1.0 arrow==1.3.0 asttokens==3.0.0 async-lru==2.0.5 attrs==25.3.0 babel==2.17.0 beautifulsoup4==4.13.5 bio==1.8.0 biopython==1.85 biothings_client==0.4.1 bleach==6.2.0 blosum==2.2.0 certifi==2025.8.3 cffi==2.0.0 charset-normalizer==3.4.3 click==8.3.0 comm==0.2.3 contourpy==1.3.3 cycler==0.12.1 datasets==4.4.2 debugpy==1.8.16 decorator==5.2.1 defusedxml==0.7.1 dill==0.4.0 executing==2.2.1 fastjsonschema==2.21.2 filelock==3.19.1 fonttools==4.61.1 fqdn==1.5.1 frozenlist==1.7.0 fsspec==2025.9.0 gitdb==4.0.12 GitPython==3.1.45 gprofiler-official==1.0.0 h11==0.16.0 hf-xet==1.1.10 httpcore==1.0.9 httpx==0.28.1 huggingface-hub==0.34.4 idna==3.10 ipykernel==6.30.1 ipython==9.5.0 ipython_pygments_lexers==1.1.1 isoduration==20.11.0 jedi==0.19.2 Jinja2==3.1.6 joblib==1.5.2 json5==0.12.1 jsonpointer==3.0.0 jsonschema==4.25.1 jsonschema-specifications==2025.9.1 jupyter_client==8.6.3 jupyter_core==5.8.1 jupyter-events==0.12.0 jupyter-lsp==2.3.0 jupyter_server==2.17.0 jupyter_server_terminals==0.5.3 jupyterlab==4.4.7 jupyterlab_pygments==0.3.0 jupyterlab_server==2.27.3 kiwisolver==1.4.9 lark==1.2.2 lightning==2.5.5 lightning-utilities==0.15.2 MarkupSafe==3.0.2 matplotlib==3.10.8 matplotlib-inline==0.1.7 MeMDLM_v2==1.0 mistune==3.1.4 mpmath==1.3.0 multidict==6.6.4 multiprocess==0.70.18 mygene==3.2.2 nbclient==0.10.2 nbconvert==7.16.6 nbformat==5.10.4 nest-asyncio==1.6.0 networkx==3.5 notebook==7.4.5 notebook_shim==0.2.4 numpy==2.3.3 nvidia-cublas-cu12==12.8.4.1 nvidia-cuda-cupti-cu12==12.8.90 nvidia-cuda-nvrtc-cu12==12.8.93 nvidia-cuda-runtime-cu12==12.8.90 nvidia-cudnn-cu12==9.10.2.21 nvidia-cufft-cu12==11.3.3.83 nvidia-cufile-cu12==1.13.1.3 nvidia-curand-cu12==10.3.9.90 nvidia-cusolver-cu12==11.7.3.90 nvidia-cusparse-cu12==12.5.8.93 nvidia-cusparselt-cu12==0.7.1 nvidia-nccl-cu12==2.27.3 nvidia-nvjitlink-cu12==12.8.93 nvidia-nvtx-cu12==12.8.90 omegaconf==2.3.0 packaging==25.0 pandas==2.3.2 pandocfilters==1.5.1 parso==0.8.5 pexpect==4.9.0 pillow==12.1.0 pip==25.2 platformdirs==4.4.0 pooch==1.8.2 prometheus_client==0.22.1 prompt_toolkit==3.0.52 propcache==0.3.2 protobuf==6.32.1 psutil==7.0.0 ptyprocess==0.7.0 pure_eval==0.2.3 pyarrow==22.0.0 pycparser==2.23 pydantic==2.11.9 pydantic_core==2.33.2 Pygments==2.19.2 pyparsing==3.3.2 python-dateutil==2.9.0.post0 python-json-logger==3.3.0 pytorch-lightning==2.5.5 pytz==2025.2 PyYAML==6.0.2 pyzmq==27.1.0 referencing==0.36.2 regex==2025.9.1 requests==2.32.5 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rfc3987-syntax==1.1.0 rpds-py==0.27.1 safetensors==0.6.2 scikit-learn==1.7.2 scipy==1.16.2 seaborn==0.13.2 Send2Trash==1.8.3 sentry-sdk==2.38.0 setuptools==78.1.1 six==1.17.0 smmap==5.0.2 sniffio==1.3.1 soupsieve==2.8 stack-data==0.6.3 sympy==1.14.0 terminado==0.18.1 threadpoolctl==3.6.0 tinycss2==1.4.0 tokenizers==0.20.3 torch==2.8.0 torchmetrics==1.8.2 tornado==6.5.2 tqdm==4.67.1 traitlets==5.14.3 transformers==4.46.0 triton==3.4.0 types-python-dateutil==2.9.0.20250822 typing_extensions==4.15.0 typing-inspection==0.4.1 tzdata==2025.2 uri-template==1.3.0 urllib3==2.5.0 wandb==0.22.0 wcwidth==0.2.13 webcolors==24.11.1 webencodings==0.5.1 websocket-client==1.8.0 wheel==0.45.1 xxhash==3.6.0 yarl==1.20.1