{
  "$defs": {
    "Candidate": {
      "additionalProperties": false,
      "properties": {
        "molecule": {
          "$ref": "#/$defs/Molecule"
        },
        "parent_ids": {
          "items": {
            "type": "string"
          },
          "title": "Parent Ids",
          "type": "array"
        },
        "generator": {
          "title": "Generator",
          "type": "string"
        },
        "revision": {
          "title": "Revision",
          "type": "string"
        }
      },
      "required": [
        "molecule",
        "generator",
        "revision"
      ],
      "title": "Candidate",
      "type": "object"
    },
    "Evidence": {
      "additionalProperties": false,
      "properties": {
        "id": {
          "title": "Id",
          "type": "string"
        },
        "source_url": {
          "title": "Source Url",
          "type": "string"
        },
        "source_version": {
          "title": "Source Version",
          "type": "string"
        },
        "retrieved_at": {
          "title": "Retrieved At",
          "type": "string"
        },
        "passage": {
          "title": "Passage",
          "type": "string"
        },
        "claim": {
          "title": "Claim",
          "type": "string"
        },
        "target_ids": {
          "items": {
            "type": "string"
          },
          "title": "Target Ids",
          "type": "array"
        },
        "species": {
          "title": "Species",
          "type": "string"
        },
        "assay": {
          "title": "Assay",
          "type": "string"
        },
        "molecular_format": {
          "title": "Molecular Format",
          "type": "string"
        },
        "direction": {
          "enum": [
            "supports",
            "opposes",
            "unresolved"
          ],
          "title": "Direction",
          "type": "string"
        },
        "evidence_type": {
          "enum": [
            "experimental",
            "computational",
            "review"
          ],
          "title": "Evidence Type",
          "type": "string"
        }
      },
      "required": [
        "id",
        "source_url",
        "source_version",
        "retrieved_at",
        "passage",
        "claim",
        "target_ids",
        "species",
        "assay",
        "molecular_format",
        "direction",
        "evidence_type"
      ],
      "title": "Evidence",
      "type": "object"
    },
    "Measurement": {
      "additionalProperties": false,
      "properties": {
        "candidate_id": {
          "title": "Candidate Id",
          "type": "string"
        },
        "endpoint": {
          "title": "Endpoint",
          "type": "string"
        },
        "value": {
          "title": "Value",
          "type": "number"
        },
        "unit": {
          "title": "Unit",
          "type": "string"
        },
        "source_id": {
          "title": "Source Id",
          "type": "string"
        },
        "kind": {
          "enum": [
            "prediction",
            "experiment"
          ],
          "title": "Kind",
          "type": "string"
        },
        "lower": {
          "anyOf": [
            {
              "type": "number"
            },
            {
              "type": "null"
            }
          ],
          "default": null,
          "title": "Lower"
        },
        "upper": {
          "anyOf": [
            {
              "type": "number"
            },
            {
              "type": "null"
            }
          ],
          "default": null,
          "title": "Upper"
        },
        "assay": {
          "title": "Assay",
          "type": "string"
        },
        "replicate_id": {
          "anyOf": [
            {
              "type": "string"
            },
            {
              "type": "null"
            }
          ],
          "default": null,
          "title": "Replicate Id"
        },
        "censor": {
          "default": "none",
          "enum": [
            "none",
            "left",
            "right"
          ],
          "title": "Censor",
          "type": "string"
        }
      },
      "required": [
        "candidate_id",
        "endpoint",
        "value",
        "unit",
        "source_id",
        "kind",
        "assay"
      ],
      "title": "Measurement",
      "type": "object"
    },
    "Modification": {
      "additionalProperties": false,
      "properties": {
        "position": {
          "minimum": 1,
          "title": "Position",
          "type": "integer"
        },
        "residue": {
          "maxLength": 1,
          "minLength": 1,
          "title": "Residue",
          "type": "string"
        },
        "ccd": {
          "minLength": 1,
          "title": "Ccd",
          "type": "string"
        }
      },
      "required": [
        "position",
        "residue",
        "ccd"
      ],
      "title": "Modification",
      "type": "object"
    },
    "Molecule": {
      "additionalProperties": false,
      "properties": {
        "sequence": {
          "title": "Sequence",
          "type": "string"
        },
        "modifications": {
          "items": {
            "$ref": "#/$defs/Modification"
          },
          "title": "Modifications",
          "type": "array"
        },
        "bonds": {
          "items": {
            "maxItems": 4,
            "minItems": 4,
            "prefixItems": [
              {
                "type": "integer"
              },
              {
                "type": "string"
              },
              {
                "type": "integer"
              },
              {
                "type": "string"
              }
            ],
            "type": "array"
          },
          "title": "Bonds",
          "type": "array"
        },
        "n_terminus": {
          "default": "free",
          "title": "N Terminus",
          "type": "string"
        },
        "c_terminus": {
          "default": "free",
          "title": "C Terminus",
          "type": "string"
        },
        "smiles": {
          "anyOf": [
            {
              "type": "string"
            },
            {
              "type": "null"
            }
          ],
          "default": null,
          "title": "Smiles"
        }
      },
      "required": [
        "sequence"
      ],
      "title": "Molecule",
      "type": "object"
    }
  },
  "additionalProperties": false,
  "properties": {
    "candidates": {
      "items": {
        "$ref": "#/$defs/Candidate"
      },
      "title": "Candidates",
      "type": "array"
    },
    "measurements": {
      "items": {
        "$ref": "#/$defs/Measurement"
      },
      "title": "Measurements",
      "type": "array"
    },
    "evidence": {
      "items": {
        "$ref": "#/$defs/Evidence"
      },
      "title": "Evidence",
      "type": "array"
    },
    "artifacts": {
      "additionalProperties": {
        "type": "string"
      },
      "title": "Artifacts",
      "type": "object"
    },
    "message": {
      "default": "",
      "title": "Message",
      "type": "string"
    }
  },
  "title": "ToolResult",
  "type": "object"
}