""" Various utilities for neural networks. """ import math import torch import torch as th import torch.nn as nn # PyTorch 1.7 has SiLU, but we support PyTorch 1.5. class SiLU(nn.Module): def forward(self, x): return x * th.sigmoid(x) class GroupNorm32(nn.GroupNorm): def forward(self, x): return super().forward(x.float()).type(x.dtype) def linear(*args, **kwargs): """ Create a linear module. """ return nn.Linear(*args, **kwargs) def avg_pool_nd(dims, *args, **kwargs): """ Create a 1D, 2D, or 3D average pooling module. """ if dims == 1: return nn.AvgPool1d(*args, **kwargs) elif dims == 2: return nn.AvgPool2d(*args, **kwargs) elif dims == 3: return nn.AvgPool3d(*args, **kwargs) raise ValueError(f"unsupported dimensions: {dims}") def update_ema(target_params, source_params, rate=0.99): """ Update target parameters to be closer to those of source parameters using an exponential moving average. :param target_params: the target parameter sequence. :param source_params: the source parameter sequence. :param rate: the EMA rate (closer to 1 means slower). """ for targ, src in zip(target_params, source_params): targ.detach().mul_(rate).add_(src, alpha=1 - rate) def zero_module(module): """ Zero out the parameters of a module and return it. """ for p in module.parameters(): p.detach().zero_() return module def scale_module(module, scale): """ Scale the parameters of a module and return it. """ for p in module.parameters(): p.detach().mul_(scale) return module def mean_flat(tensor): """ Take the mean over all non-batch dimensions. """ return tensor.mean(dim=list(range(1, len(tensor.shape)))) def normalization(channels): """ Make a standard normalization layer. :param channels: number of input channels. :return: an nn.Module for normalization. """ return GroupNorm32(32, channels) def timestep_embedding(timesteps, dim, max_period=10000): """ Create sinusoidal timestep embeddings. :param timesteps: a 1-D Tensor of N indices, one per batch element. These may be fractional. :param dim: the dimension of the output. :param max_period: controls the minimum frequency of the embeddings. :return: an [N x dim] Tensor of positional embeddings. """ half = dim // 2 freqs = th.exp( -math.log(max_period) * th.arange(start=0, end=half, dtype=th.float32) / half ).to(device=timesteps.device) args = timesteps[:, None].float() * freqs[None] embedding = th.cat([th.cos(args), th.sin(args)], dim=-1) if dim % 2: embedding = th.cat([embedding, th.zeros_like(embedding[:, :1])], dim=-1) return embedding def concatenate_sn_sp(sn_repr_emb, sp_repr_emb, sn_repr_len): # Create an empty tensor to store the concatenated embeddings concat_emb = torch.empty_like(sn_repr_emb) # Iterate over the batch size for i in range(sn_repr_emb.size(0)): # Get the true sequence length for the sn embedding seq_len = sn_repr_len[i] # get the true sequence length for the sp embedding sp_idx = sp_repr_emb.size(1) - seq_len # Cut off the extra dimensions in sn_repr_emb and sp_repr_emb sn_emb = sn_repr_emb[i, :seq_len] sp_emb = sp_repr_emb[i, :sp_idx] # Concatenate the embeddings along the sequence length dimension concat_emb[i] = torch.cat([sn_emb, sp_emb], dim=0) return concat_emb def split_into_sn_and_sp(model_output, sn_repr_len): # create an empty tensor to store the split sn_repr model_output_sn = torch.empty_like(model_output) model_output_sp = torch.empty_like(model_output) microbatch_size, seq_len, emb_dim = model_output.shape model_output_sn_mask = torch.empty((microbatch_size, seq_len)) model_output_sp_mask = torch.empty((microbatch_size, seq_len)) # iterate over the batc size for i in range(microbatch_size): # the start index of the sp output is the length of the sn orig_sn_len = sn_repr_len[i] # the SP # split the sp_repr of the current instance off from the model output sp_repr_out = model_output[i, orig_sn_len:] # TODO change this to more sensible padding # pad the sp representation model output until it is again args.seq_len long sp_padding = sp_repr_out[-1].repeat(orig_sn_len, 1) # concatenate the embeddings along the model_output_sp[i] = torch.cat([sp_repr_out, sp_padding], dim=0) # the SN # split the sn_repr of the current instance off from the model output sn_repr_out = model_output[i, :orig_sn_len] sn_padding = sn_repr_out[-1].repeat(seq_len - orig_sn_len, 1) model_output_sn[i] = torch.cat([sn_repr_out, sn_padding], dim=0) # the masks: they only mask the additional padding added now, not the original padding added after the sp sp_mask = torch.ones(seq_len).to(model_output.device) sp_mask[-orig_sn_len:] = 0 model_output_sp_mask[i] = sp_mask sn_mask = torch.ones(seq_len).to(model_output.device) sn_mask[orig_sn_len:] = 0 model_output_sn_mask[i] = sn_mask model_output_sn_mask = model_output_sn_mask.to(model_output.device) model_output_sp_mask = model_output_sp_mask.to(model_output.device) return model_output_sn, model_output_sp, model_output_sn_mask, model_output_sp_mask