"""CPU batch inference contract for organizer-run model evaluation.""" import argparse import numpy as np import pandas as pd from model import Model, validate_rows def predict_file(input_path, output_path): frame = pd.read_parquet(input_path) if list(frame.columns) != ['id', 'smiles', 'sequence']: raise ValueError('Expected input columns: id, smiles, sequence') model = Model() predictions = [] for start in range(0, len(frame), 128): rows = validate_rows(frame.iloc[start:start + 128].to_dict('records')) predictions.extend(model.predict(rows)) if not np.isfinite(predictions).all(): raise ValueError('Model returned non-finite predictions') pd.DataFrame({'id': frame.id, 'prediction': predictions}).to_csv(output_path, index=False) if __name__ == '__main__': parser = argparse.ArgumentParser() parser.add_argument('--input', required=True) parser.add_argument('--output', required=True) args = parser.parse_args() predict_file(args.input, args.output)