diff --git a/.gitattributes b/.gitattributes index 0d7528800dbc4fb14becc948178654997b93e3ad..af2f8fa9f2c8706f3a8367ded246dd6a7f888ac2 100644 --- a/.gitattributes +++ b/.gitattributes @@ -74,3 +74,14 @@ venv/lib/python3.12/site-packages/numpy/_core/__pycache__/fromnumeric.cpython-31 venv/lib/python3.12/site-packages/numpy/_core/_multiarray_tests.cpython-312-x86_64-linux-gnu.so filter=lfs diff=lfs merge=lfs -text venv/lib/python3.12/site-packages/numpy/_core/_multiarray_umath.cpython-312-x86_64-linux-gnu.so filter=lfs diff=lfs merge=lfs -text venv/lib/python3.12/site-packages/numpy/_core/_simd.cpython-312-x86_64-linux-gnu.so filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/_core/tests/__pycache__/test_datetime.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/_core/tests/__pycache__/test_dtype.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/_core/tests/__pycache__/test_multiarray.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/_core/tests/__pycache__/test_nditer.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/_core/tests/__pycache__/test_numeric.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/_core/tests/__pycache__/test_regression.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/_core/tests/__pycache__/test_ufunc.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/_core/tests/__pycache__/test_umath.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/f2py/__pycache__/crackfortran.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/fft/_pocketfft_umath.cpython-312-x86_64-linux-gnu.so filter=lfs diff=lfs merge=lfs -text +venv/lib/python3.12/site-packages/numpy/lib/__pycache__/_function_base_impl.cpython-312.pyc filter=lfs diff=lfs merge=lfs -text diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/_public_dtype_api_table.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/_public_dtype_api_table.h new file mode 100644 index 0000000000000000000000000000000000000000..51f39054062762c39b3df4f689b74060e97036c0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/_public_dtype_api_table.h @@ -0,0 +1,86 @@ +/* + * Public exposure of the DType Classes. These are tricky to expose + * via the Python API, so they are exposed through this header for now. + * + * These definitions are only relevant for the public API and we reserve + * the slots 320-360 in the API table generation for this (currently). + * + * TODO: This file should be consolidated with the API table generation + * (although not sure the current generation is worth preserving). + */ +#ifndef NUMPY_CORE_INCLUDE_NUMPY__PUBLIC_DTYPE_API_TABLE_H_ +#define NUMPY_CORE_INCLUDE_NUMPY__PUBLIC_DTYPE_API_TABLE_H_ + +#if !(defined(NPY_INTERNAL_BUILD) && NPY_INTERNAL_BUILD) + +/* All of these require NumPy 2.0 support */ +#if NPY_FEATURE_VERSION >= NPY_2_0_API_VERSION + +/* + * The type of the DType metaclass + */ +#define PyArrayDTypeMeta_Type (*(PyTypeObject *)(PyArray_API + 320)[0]) +/* + * NumPy's builtin DTypes: + */ +#define PyArray_BoolDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[1]) +/* Integers */ +#define PyArray_ByteDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[2]) +#define PyArray_UByteDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[3]) +#define PyArray_ShortDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[4]) +#define PyArray_UShortDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[5]) +#define PyArray_IntDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[6]) +#define PyArray_UIntDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[7]) +#define PyArray_LongDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[8]) +#define PyArray_ULongDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[9]) +#define PyArray_LongLongDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[10]) +#define PyArray_ULongLongDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[11]) +/* Integer aliases */ +#define PyArray_Int8DType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[12]) +#define PyArray_UInt8DType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[13]) +#define PyArray_Int16DType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[14]) +#define PyArray_UInt16DType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[15]) +#define PyArray_Int32DType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[16]) +#define PyArray_UInt32DType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[17]) +#define PyArray_Int64DType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[18]) +#define PyArray_UInt64DType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[19]) +#define PyArray_IntpDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[20]) +#define PyArray_UIntpDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[21]) +/* Floats */ +#define PyArray_HalfDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[22]) +#define PyArray_FloatDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[23]) +#define PyArray_DoubleDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[24]) +#define PyArray_LongDoubleDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[25]) +/* Complex */ +#define PyArray_CFloatDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[26]) +#define PyArray_CDoubleDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[27]) +#define PyArray_CLongDoubleDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[28]) +/* String/Bytes */ +#define PyArray_BytesDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[29]) +#define PyArray_UnicodeDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[30]) +/* Datetime/Timedelta */ +#define PyArray_DatetimeDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[31]) +#define PyArray_TimedeltaDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[32]) +/* Object/Void */ +#define PyArray_ObjectDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[33]) +#define PyArray_VoidDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[34]) +/* Python types (used as markers for scalars) */ +#define PyArray_PyLongDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[35]) +#define PyArray_PyFloatDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[36]) +#define PyArray_PyComplexDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[37]) +/* Default integer type */ +#define PyArray_DefaultIntDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[38]) +/* New non-legacy DTypes follow in the order they were added */ +#define PyArray_StringDType (*(PyArray_DTypeMeta *)(PyArray_API + 320)[39]) + +/* NOTE: offset 40 is free */ + +/* Need to start with a larger offset again for the abstract classes: */ +#define PyArray_IntAbstractDType (*(PyArray_DTypeMeta *)PyArray_API[366]) +#define PyArray_FloatAbstractDType (*(PyArray_DTypeMeta *)PyArray_API[367]) +#define PyArray_ComplexAbstractDType (*(PyArray_DTypeMeta *)PyArray_API[368]) + +#endif /* NPY_FEATURE_VERSION >= NPY_2_0_API_VERSION */ + +#endif /* NPY_INTERNAL_BUILD */ +#endif /* NUMPY_CORE_INCLUDE_NUMPY__PUBLIC_DTYPE_API_TABLE_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/arrayobject.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/arrayobject.h new file mode 100644 index 0000000000000000000000000000000000000000..97d93590e401fc878b72281d938170623f01da97 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/arrayobject.h @@ -0,0 +1,7 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_ARRAYOBJECT_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_ARRAYOBJECT_H_ +#define Py_ARRAYOBJECT_H + +#include "ndarrayobject.h" + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_ARRAYOBJECT_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/arrayscalars.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/arrayscalars.h new file mode 100644 index 0000000000000000000000000000000000000000..ff048061f70abda097606b6247e32234d4eacf29 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/arrayscalars.h @@ -0,0 +1,196 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_ARRAYSCALARS_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_ARRAYSCALARS_H_ + +#ifndef _MULTIARRAYMODULE +typedef struct { + PyObject_HEAD + npy_bool obval; +} PyBoolScalarObject; +#endif + + +typedef struct { + PyObject_HEAD + signed char obval; +} PyByteScalarObject; + + +typedef struct { + PyObject_HEAD + short obval; +} PyShortScalarObject; + + +typedef struct { + PyObject_HEAD + int obval; +} PyIntScalarObject; + + +typedef struct { + PyObject_HEAD + long obval; +} PyLongScalarObject; + + +typedef struct { + PyObject_HEAD + npy_longlong obval; +} PyLongLongScalarObject; + + +typedef struct { + PyObject_HEAD + unsigned char obval; +} PyUByteScalarObject; + + +typedef struct { + PyObject_HEAD + unsigned short obval; +} PyUShortScalarObject; + + +typedef struct { + PyObject_HEAD + unsigned int obval; +} PyUIntScalarObject; + + +typedef struct { + PyObject_HEAD + unsigned long obval; +} PyULongScalarObject; + + +typedef struct { + PyObject_HEAD + npy_ulonglong obval; +} PyULongLongScalarObject; + + +typedef struct { + PyObject_HEAD + npy_half obval; +} PyHalfScalarObject; + + +typedef struct { + PyObject_HEAD + float obval; +} PyFloatScalarObject; + + +typedef struct { + PyObject_HEAD + double obval; +} PyDoubleScalarObject; + + +typedef struct { + PyObject_HEAD + npy_longdouble obval; +} PyLongDoubleScalarObject; + + +typedef struct { + PyObject_HEAD + npy_cfloat obval; +} PyCFloatScalarObject; + + +typedef struct { + PyObject_HEAD + npy_cdouble obval; +} PyCDoubleScalarObject; + + +typedef struct { + PyObject_HEAD + npy_clongdouble obval; +} PyCLongDoubleScalarObject; + + +typedef struct { + PyObject_HEAD + PyObject * obval; +} PyObjectScalarObject; + +typedef struct { + PyObject_HEAD + npy_datetime obval; + PyArray_DatetimeMetaData obmeta; +} PyDatetimeScalarObject; + +typedef struct { + PyObject_HEAD + npy_timedelta obval; + PyArray_DatetimeMetaData obmeta; +} PyTimedeltaScalarObject; + + +typedef struct { + PyObject_HEAD + char obval; +} PyScalarObject; + +#define PyStringScalarObject PyBytesObject +#ifndef Py_LIMITED_API +typedef struct { + /* note that the PyObject_HEAD macro lives right here */ + PyUnicodeObject base; + Py_UCS4 *obval; + #if NPY_FEATURE_VERSION >= NPY_1_20_API_VERSION + char *buffer_fmt; + #endif +} PyUnicodeScalarObject; +#endif + + +typedef struct { + PyObject_VAR_HEAD + char *obval; +#if defined(NPY_INTERNAL_BUILD) && NPY_INTERNAL_BUILD + /* Internally use the subclass to allow accessing names/fields */ + _PyArray_LegacyDescr *descr; +#else + PyArray_Descr *descr; +#endif + int flags; + PyObject *base; + #if NPY_FEATURE_VERSION >= NPY_1_20_API_VERSION + void *_buffer_info; /* private buffer info, tagged to allow warning */ + #endif +} PyVoidScalarObject; + +/* Macros + PyScalarObject + PyArrType_Type + are defined in ndarrayobject.h +*/ + +#define PyArrayScalar_False ((PyObject *)(&(_PyArrayScalar_BoolValues[0]))) +#define PyArrayScalar_True ((PyObject *)(&(_PyArrayScalar_BoolValues[1]))) +#define PyArrayScalar_FromLong(i) \ + ((PyObject *)(&(_PyArrayScalar_BoolValues[((i)!=0)]))) +#define PyArrayScalar_RETURN_BOOL_FROM_LONG(i) \ + return Py_INCREF(PyArrayScalar_FromLong(i)), \ + PyArrayScalar_FromLong(i) +#define PyArrayScalar_RETURN_FALSE \ + return Py_INCREF(PyArrayScalar_False), \ + PyArrayScalar_False +#define PyArrayScalar_RETURN_TRUE \ + return Py_INCREF(PyArrayScalar_True), \ + PyArrayScalar_True + +#define PyArrayScalar_New(cls) \ + Py##cls##ArrType_Type.tp_alloc(&Py##cls##ArrType_Type, 0) +#ifndef Py_LIMITED_API +/* For the limited API, use PyArray_ScalarAsCtype instead */ +#define PyArrayScalar_VAL(obj, cls) \ + ((Py##cls##ScalarObject *)obj)->obval +#define PyArrayScalar_ASSIGN(obj, cls, val) \ + PyArrayScalar_VAL(obj, cls) = val +#endif + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_ARRAYSCALARS_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/dtype_api.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/dtype_api.h new file mode 100644 index 0000000000000000000000000000000000000000..9dd3effa3a803301695af949fd9881785c010fca --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/dtype_api.h @@ -0,0 +1,479 @@ +/* + * The public DType API + */ + +#ifndef NUMPY_CORE_INCLUDE_NUMPY___DTYPE_API_H_ +#define NUMPY_CORE_INCLUDE_NUMPY___DTYPE_API_H_ + +struct PyArrayMethodObject_tag; + +/* + * Largely opaque struct for DType classes (i.e. metaclass instances). + * The internal definition is currently in `ndarraytypes.h` (export is a bit + * more complex because `PyArray_Descr` is a DTypeMeta internally but not + * externally). + */ +#if !(defined(NPY_INTERNAL_BUILD) && NPY_INTERNAL_BUILD) + +#ifndef Py_LIMITED_API + + typedef struct PyArray_DTypeMeta_tag { + PyHeapTypeObject super; + + /* + * Most DTypes will have a singleton default instance, for the + * parametric legacy DTypes (bytes, string, void, datetime) this + * may be a pointer to the *prototype* instance? + */ + PyArray_Descr *singleton; + /* Copy of the legacy DTypes type number, usually invalid. */ + int type_num; + + /* The type object of the scalar instances (may be NULL?) */ + PyTypeObject *scalar_type; + /* + * DType flags to signal legacy, parametric, or + * abstract. But plenty of space for additional information/flags. + */ + npy_uint64 flags; + + /* + * Use indirection in order to allow a fixed size for this struct. + * A stable ABI size makes creating a static DType less painful + * while also ensuring flexibility for all opaque API (with one + * indirection due the pointer lookup). + */ + void *dt_slots; + /* Allow growing (at the moment also beyond this) */ + void *reserved[3]; + } PyArray_DTypeMeta; + +#else + +typedef PyTypeObject PyArray_DTypeMeta; + +#endif /* Py_LIMITED_API */ + +#endif /* not internal build */ + +/* + * ****************************************************** + * ArrayMethod API (Casting and UFuncs) + * ****************************************************** + */ + + +typedef enum { + /* Flag for whether the GIL is required */ + NPY_METH_REQUIRES_PYAPI = 1 << 0, + /* + * Some functions cannot set floating point error flags, this flag + * gives us the option (not requirement) to skip floating point error + * setup/check. No function should set error flags and ignore them + * since it would interfere with chaining operations (e.g. casting). + */ + NPY_METH_NO_FLOATINGPOINT_ERRORS = 1 << 1, + /* Whether the method supports unaligned access (not runtime) */ + NPY_METH_SUPPORTS_UNALIGNED = 1 << 2, + /* + * Used for reductions to allow reordering the operation. At this point + * assume that if set, it also applies to normal operations though! + */ + NPY_METH_IS_REORDERABLE = 1 << 3, + /* + * Private flag for now for *logic* functions. The logical functions + * `logical_or` and `logical_and` can always cast the inputs to booleans + * "safely" (because that is how the cast to bool is defined). + * @seberg: I am not sure this is the best way to handle this, so its + * private for now (also it is very limited anyway). + * There is one "exception". NA aware dtypes cannot cast to bool + * (hopefully), so the `??->?` loop should error even with this flag. + * But a second NA fallback loop will be necessary. + */ + _NPY_METH_FORCE_CAST_INPUTS = 1 << 17, + + /* All flags which can change at runtime */ + NPY_METH_RUNTIME_FLAGS = ( + NPY_METH_REQUIRES_PYAPI | + NPY_METH_NO_FLOATINGPOINT_ERRORS), +} NPY_ARRAYMETHOD_FLAGS; + + +typedef struct PyArrayMethod_Context_tag { + /* The caller, which is typically the original ufunc. May be NULL */ + PyObject *caller; + /* The method "self". Currently an opaque object. */ + struct PyArrayMethodObject_tag *method; + + /* Operand descriptors, filled in by resolve_descriptors */ + PyArray_Descr *const *descriptors; + /* Structure may grow (this is harmless for DType authors) */ +} PyArrayMethod_Context; + + +/* + * The main object for creating a new ArrayMethod. We use the typical `slots` + * mechanism used by the Python limited API (see below for the slot defs). + */ +typedef struct { + const char *name; + int nin, nout; + NPY_CASTING casting; + NPY_ARRAYMETHOD_FLAGS flags; + PyArray_DTypeMeta **dtypes; + PyType_Slot *slots; +} PyArrayMethod_Spec; + + +/* + * ArrayMethod slots + * ----------------- + * + * SLOTS IDs For the ArrayMethod creation, once fully public, IDs are fixed + * but can be deprecated and arbitrarily extended. + */ +#define _NPY_METH_resolve_descriptors_with_scalars 1 +#define NPY_METH_resolve_descriptors 2 +#define NPY_METH_get_loop 3 +#define NPY_METH_get_reduction_initial 4 +/* specific loops for constructions/default get_loop: */ +#define NPY_METH_strided_loop 5 +#define NPY_METH_contiguous_loop 6 +#define NPY_METH_unaligned_strided_loop 7 +#define NPY_METH_unaligned_contiguous_loop 8 +#define NPY_METH_contiguous_indexed_loop 9 +#define _NPY_METH_static_data 10 + + +/* + * The resolve descriptors function, must be able to handle NULL values for + * all output (but not input) `given_descrs` and fill `loop_descrs`. + * Return -1 on error or 0 if the operation is not possible without an error + * set. (This may still be in flux.) + * Otherwise must return the "casting safety", for normal functions, this is + * almost always "safe" (or even "equivalent"?). + * + * `resolve_descriptors` is optional if all output DTypes are non-parametric. + */ +typedef NPY_CASTING (PyArrayMethod_ResolveDescriptors)( + /* "method" is currently opaque (necessary e.g. to wrap Python) */ + struct PyArrayMethodObject_tag *method, + /* DTypes the method was created for */ + PyArray_DTypeMeta *const *dtypes, + /* Input descriptors (instances). Outputs may be NULL. */ + PyArray_Descr *const *given_descrs, + /* Exact loop descriptors to use, must not hold references on error */ + PyArray_Descr **loop_descrs, + npy_intp *view_offset); + + +/* + * Rarely needed, slightly more powerful version of `resolve_descriptors`. + * See also `PyArrayMethod_ResolveDescriptors` for details on shared arguments. + * + * NOTE: This function is private now as it is unclear how and what to pass + * exactly as additional information to allow dealing with the scalars. + * See also gh-24915. + */ +typedef NPY_CASTING (PyArrayMethod_ResolveDescriptorsWithScalar)( + struct PyArrayMethodObject_tag *method, + PyArray_DTypeMeta *const *dtypes, + /* Unlike above, these can have any DType and we may allow NULL. */ + PyArray_Descr *const *given_descrs, + /* + * Input scalars or NULL. Only ever passed for python scalars. + * WARNING: In some cases, a loop may be explicitly selected and the + * value passed is not available (NULL) or does not have the + * expected type. + */ + PyObject *const *input_scalars, + PyArray_Descr **loop_descrs, + npy_intp *view_offset); + + + +typedef int (PyArrayMethod_StridedLoop)(PyArrayMethod_Context *context, + char *const *data, const npy_intp *dimensions, const npy_intp *strides, + NpyAuxData *transferdata); + + +typedef int (PyArrayMethod_GetLoop)( + PyArrayMethod_Context *context, + int aligned, int move_references, + const npy_intp *strides, + PyArrayMethod_StridedLoop **out_loop, + NpyAuxData **out_transferdata, + NPY_ARRAYMETHOD_FLAGS *flags); + +/** + * Query an ArrayMethod for the initial value for use in reduction. + * + * @param context The arraymethod context, mainly to access the descriptors. + * @param reduction_is_empty Whether the reduction is empty. When it is, the + * value returned may differ. In this case it is a "default" value that + * may differ from the "identity" value normally used. For example: + * - `0.0` is the default for `sum([])`. But `-0.0` is the correct + * identity otherwise as it preserves the sign for `sum([-0.0])`. + * - We use no identity for object, but return the default of `0` and `1` + * for the empty `sum([], dtype=object)` and `prod([], dtype=object)`. + * This allows `np.sum(np.array(["a", "b"], dtype=object))` to work. + * - `-inf` or `INT_MIN` for `max` is an identity, but at least `INT_MIN` + * not a good *default* when there are no items. + * @param initial Pointer to initial data to be filled (if possible) + * + * @returns -1, 0, or 1 indicating error, no initial value, and initial being + * successfully filled. Errors must not be given where 0 is correct, NumPy + * may call this even when not strictly necessary. + */ +typedef int (PyArrayMethod_GetReductionInitial)( + PyArrayMethod_Context *context, npy_bool reduction_is_empty, + void *initial); + +/* + * The following functions are only used by the wrapping array method defined + * in umath/wrapping_array_method.c + */ + + +/* + * The function to convert the given descriptors (passed in to + * `resolve_descriptors`) and translates them for the wrapped loop. + * The new descriptors MUST be viewable with the old ones, `NULL` must be + * supported (for outputs) and should normally be forwarded. + * + * The function must clean up on error. + * + * NOTE: We currently assume that this translation gives "viewable" results. + * I.e. there is no additional casting related to the wrapping process. + * In principle that could be supported, but not sure it is useful. + * This currently also means that e.g. alignment must apply identically + * to the new dtypes. + * + * TODO: Due to the fact that `resolve_descriptors` is also used for `can_cast` + * there is no way to "pass out" the result of this function. This means + * it will be called twice for every ufunc call. + * (I am considering including `auxdata` as an "optional" parameter to + * `resolve_descriptors`, so that it can be filled there if not NULL.) + */ +typedef int (PyArrayMethod_TranslateGivenDescriptors)(int nin, int nout, + PyArray_DTypeMeta *const wrapped_dtypes[], + PyArray_Descr *const given_descrs[], PyArray_Descr *new_descrs[]); + +/** + * The function to convert the actual loop descriptors (as returned by the + * original `resolve_descriptors` function) to the ones the output array + * should use. + * This function must return "viewable" types, it must not mutate them in any + * form that would break the inner-loop logic. Does not need to support NULL. + * + * The function must clean up on error. + * + * @param nargs Number of arguments + * @param new_dtypes The DTypes of the output (usually probably not needed) + * @param given_descrs Original given_descrs to the resolver, necessary to + * fetch any information related to the new dtypes from the original. + * @param original_descrs The `loop_descrs` returned by the wrapped loop. + * @param loop_descrs The output descriptors, compatible to `original_descrs`. + * + * @returns 0 on success, -1 on failure. + */ +typedef int (PyArrayMethod_TranslateLoopDescriptors)(int nin, int nout, + PyArray_DTypeMeta *const new_dtypes[], PyArray_Descr *const given_descrs[], + PyArray_Descr *original_descrs[], PyArray_Descr *loop_descrs[]); + + + +/* + * A traverse loop working on a single array. This is similar to the general + * strided-loop function. This is designed for loops that need to visit every + * element of a single array. + * + * Currently this is used for array clearing, via the NPY_DT_get_clear_loop + * API hook, and zero-filling, via the NPY_DT_get_fill_zero_loop API hook. + * These are most useful for handling arrays storing embedded references to + * python objects or heap-allocated data. + * + * The `void *traverse_context` is passed in because we may need to pass in + * Interpreter state or similar in the future, but we don't want to pass in + * a full context (with pointers to dtypes, method, caller which all make + * no sense for a traverse function). + * + * We assume for now that this context can be just passed through in the + * the future (for structured dtypes). + * + */ +typedef int (PyArrayMethod_TraverseLoop)( + void *traverse_context, const PyArray_Descr *descr, char *data, + npy_intp size, npy_intp stride, NpyAuxData *auxdata); + + +/* + * Simplified get_loop function specific to dtype traversal + * + * It should set the flags needed for the traversal loop and set out_loop to the + * loop function, which must be a valid PyArrayMethod_TraverseLoop + * pointer. Currently this is used for zero-filling and clearing arrays storing + * embedded references. + * + */ +typedef int (PyArrayMethod_GetTraverseLoop)( + void *traverse_context, const PyArray_Descr *descr, + int aligned, npy_intp fixed_stride, + PyArrayMethod_TraverseLoop **out_loop, NpyAuxData **out_auxdata, + NPY_ARRAYMETHOD_FLAGS *flags); + + +/* + * Type of the C promoter function, which must be wrapped into a + * PyCapsule with name "numpy._ufunc_promoter". + * + * Note that currently the output dtypes are always NULL unless they are + * also part of the signature. This is an implementation detail and could + * change in the future. However, in general promoters should not have a + * need for output dtypes. + * (There are potential use-cases, these are currently unsupported.) + */ +typedef int (PyArrayMethod_PromoterFunction)(PyObject *ufunc, + PyArray_DTypeMeta *const op_dtypes[], PyArray_DTypeMeta *const signature[], + PyArray_DTypeMeta *new_op_dtypes[]); + +/* + * **************************** + * DTYPE API + * **************************** + */ + +#define NPY_DT_ABSTRACT 1 << 1 +#define NPY_DT_PARAMETRIC 1 << 2 +#define NPY_DT_NUMERIC 1 << 3 + +/* + * These correspond to slots in the NPY_DType_Slots struct and must + * be in the same order as the members of that struct. If new slots + * get added or old slots get removed NPY_NUM_DTYPE_SLOTS must also + * be updated + */ + +#define NPY_DT_discover_descr_from_pyobject 1 +// this slot is considered private because its API hasn't been decided +#define _NPY_DT_is_known_scalar_type 2 +#define NPY_DT_default_descr 3 +#define NPY_DT_common_dtype 4 +#define NPY_DT_common_instance 5 +#define NPY_DT_ensure_canonical 6 +#define NPY_DT_setitem 7 +#define NPY_DT_getitem 8 +#define NPY_DT_get_clear_loop 9 +#define NPY_DT_get_fill_zero_loop 10 +#define NPY_DT_finalize_descr 11 + +// These PyArray_ArrFunc slots will be deprecated and replaced eventually +// getitem and setitem can be defined as a performance optimization; +// by default the user dtypes call `legacy_getitem_using_DType` and +// `legacy_setitem_using_DType`, respectively. This functionality is +// only supported for basic NumPy DTypes. + + +// used to separate dtype slots from arrfuncs slots +// intended only for internal use but defined here for clarity +#define _NPY_DT_ARRFUNCS_OFFSET (1 << 10) + +// Cast is disabled +// #define NPY_DT_PyArray_ArrFuncs_cast 0 + _NPY_DT_ARRFUNCS_OFFSET + +#define NPY_DT_PyArray_ArrFuncs_getitem 1 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_setitem 2 + _NPY_DT_ARRFUNCS_OFFSET + +// Copyswap is disabled +// #define NPY_DT_PyArray_ArrFuncs_copyswapn 3 + _NPY_DT_ARRFUNCS_OFFSET +// #define NPY_DT_PyArray_ArrFuncs_copyswap 4 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_compare 5 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_argmax 6 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_dotfunc 7 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_scanfunc 8 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_fromstr 9 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_nonzero 10 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_fill 11 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_fillwithscalar 12 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_sort 13 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_argsort 14 + _NPY_DT_ARRFUNCS_OFFSET + +// Casting related slots are disabled. See +// https://github.com/numpy/numpy/pull/23173#discussion_r1101098163 +// #define NPY_DT_PyArray_ArrFuncs_castdict 15 + _NPY_DT_ARRFUNCS_OFFSET +// #define NPY_DT_PyArray_ArrFuncs_scalarkind 16 + _NPY_DT_ARRFUNCS_OFFSET +// #define NPY_DT_PyArray_ArrFuncs_cancastscalarkindto 17 + _NPY_DT_ARRFUNCS_OFFSET +// #define NPY_DT_PyArray_ArrFuncs_cancastto 18 + _NPY_DT_ARRFUNCS_OFFSET + +// These are deprecated in NumPy 1.19, so are disabled here. +// #define NPY_DT_PyArray_ArrFuncs_fastclip 19 + _NPY_DT_ARRFUNCS_OFFSET +// #define NPY_DT_PyArray_ArrFuncs_fastputmask 20 + _NPY_DT_ARRFUNCS_OFFSET +// #define NPY_DT_PyArray_ArrFuncs_fasttake 21 + _NPY_DT_ARRFUNCS_OFFSET +#define NPY_DT_PyArray_ArrFuncs_argmin 22 + _NPY_DT_ARRFUNCS_OFFSET + + +// TODO: These slots probably still need some thought, and/or a way to "grow"? +typedef struct { + PyTypeObject *typeobj; /* type of python scalar or NULL */ + int flags; /* flags, including parametric and abstract */ + /* NULL terminated cast definitions. Use NULL for the newly created DType */ + PyArrayMethod_Spec **casts; + PyType_Slot *slots; + /* Baseclass or NULL (will always subclass `np.dtype`) */ + PyTypeObject *baseclass; +} PyArrayDTypeMeta_Spec; + + +typedef PyArray_Descr *(PyArrayDTypeMeta_DiscoverDescrFromPyobject)( + PyArray_DTypeMeta *cls, PyObject *obj); + +/* + * Before making this public, we should decide whether it should pass + * the type, or allow looking at the object. A possible use-case: + * `np.array(np.array([0]), dtype=np.ndarray)` + * Could consider arrays that are not `dtype=ndarray` "scalars". + */ +typedef int (PyArrayDTypeMeta_IsKnownScalarType)( + PyArray_DTypeMeta *cls, PyTypeObject *obj); + +typedef PyArray_Descr *(PyArrayDTypeMeta_DefaultDescriptor)(PyArray_DTypeMeta *cls); +typedef PyArray_DTypeMeta *(PyArrayDTypeMeta_CommonDType)( + PyArray_DTypeMeta *dtype1, PyArray_DTypeMeta *dtype2); + + +/* + * Convenience utility for getting a reference to the DType metaclass associated + * with a dtype instance. + */ +#define NPY_DTYPE(descr) ((PyArray_DTypeMeta *)Py_TYPE(descr)) + +static inline PyArray_DTypeMeta * +NPY_DT_NewRef(PyArray_DTypeMeta *o) { + Py_INCREF((PyObject *)o); + return o; +} + + +typedef PyArray_Descr *(PyArrayDTypeMeta_CommonInstance)( + PyArray_Descr *dtype1, PyArray_Descr *dtype2); +typedef PyArray_Descr *(PyArrayDTypeMeta_EnsureCanonical)(PyArray_Descr *dtype); +/* + * Returns either a new reference to *dtype* or a new descriptor instance + * initialized with the same parameters as *dtype*. The caller cannot know + * which choice a dtype will make. This function is called just before the + * array buffer is created for a newly created array, it is not called for + * views and the descriptor returned by this function is attached to the array. + */ +typedef PyArray_Descr *(PyArrayDTypeMeta_FinalizeDescriptor)(PyArray_Descr *dtype); + +/* + * TODO: These two functions are currently only used for experimental DType + * API support. Their relation should be "reversed": NumPy should + * always use them internally. + * There are open points about "casting safety" though, e.g. setting + * elements is currently always unsafe. + */ +typedef int(PyArrayDTypeMeta_SetItem)(PyArray_Descr *, PyObject *, char *); +typedef PyObject *(PyArrayDTypeMeta_GetItem)(PyArray_Descr *, char *); + +#endif /* NUMPY_CORE_INCLUDE_NUMPY___DTYPE_API_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/halffloat.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/halffloat.h new file mode 100644 index 0000000000000000000000000000000000000000..950401664e101d17ce5461ecb21c7d3bdf824f42 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/halffloat.h @@ -0,0 +1,70 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_HALFFLOAT_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_HALFFLOAT_H_ + +#include +#include + +#ifdef __cplusplus +extern "C" { +#endif + +/* + * Half-precision routines + */ + +/* Conversions */ +float npy_half_to_float(npy_half h); +double npy_half_to_double(npy_half h); +npy_half npy_float_to_half(float f); +npy_half npy_double_to_half(double d); +/* Comparisons */ +int npy_half_eq(npy_half h1, npy_half h2); +int npy_half_ne(npy_half h1, npy_half h2); +int npy_half_le(npy_half h1, npy_half h2); +int npy_half_lt(npy_half h1, npy_half h2); +int npy_half_ge(npy_half h1, npy_half h2); +int npy_half_gt(npy_half h1, npy_half h2); +/* faster *_nonan variants for when you know h1 and h2 are not NaN */ +int npy_half_eq_nonan(npy_half h1, npy_half h2); +int npy_half_lt_nonan(npy_half h1, npy_half h2); +int npy_half_le_nonan(npy_half h1, npy_half h2); +/* Miscellaneous functions */ +int npy_half_iszero(npy_half h); +int npy_half_isnan(npy_half h); +int npy_half_isinf(npy_half h); +int npy_half_isfinite(npy_half h); +int npy_half_signbit(npy_half h); +npy_half npy_half_copysign(npy_half x, npy_half y); +npy_half npy_half_spacing(npy_half h); +npy_half npy_half_nextafter(npy_half x, npy_half y); +npy_half npy_half_divmod(npy_half x, npy_half y, npy_half *modulus); + +/* + * Half-precision constants + */ + +#define NPY_HALF_ZERO (0x0000u) +#define NPY_HALF_PZERO (0x0000u) +#define NPY_HALF_NZERO (0x8000u) +#define NPY_HALF_ONE (0x3c00u) +#define NPY_HALF_NEGONE (0xbc00u) +#define NPY_HALF_PINF (0x7c00u) +#define NPY_HALF_NINF (0xfc00u) +#define NPY_HALF_NAN (0x7e00u) + +#define NPY_MAX_HALF (0x7bffu) + +/* + * Bit-level conversions + */ + +npy_uint16 npy_floatbits_to_halfbits(npy_uint32 f); +npy_uint16 npy_doublebits_to_halfbits(npy_uint64 d); +npy_uint32 npy_halfbits_to_floatbits(npy_uint16 h); +npy_uint64 npy_halfbits_to_doublebits(npy_uint16 h); + +#ifdef __cplusplus +} +#endif + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_HALFFLOAT_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/ndarrayobject.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/ndarrayobject.h new file mode 100644 index 0000000000000000000000000000000000000000..f06bafe5b52a4ab930c2aad0c45d95d0b6d8104b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/ndarrayobject.h @@ -0,0 +1,304 @@ +/* + * DON'T INCLUDE THIS DIRECTLY. + */ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NDARRAYOBJECT_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NDARRAYOBJECT_H_ + +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include "ndarraytypes.h" +#include "dtype_api.h" + +/* Includes the "function" C-API -- these are all stored in a + list of pointers --- one for each file + The two lists are concatenated into one in multiarray. + + They are available as import_array() +*/ + +#include "__multiarray_api.h" + +/* + * Include any definitions which are defined differently for 1.x and 2.x + * (Symbols only available on 2.x are not there, but rather guarded.) + */ +#include "npy_2_compat.h" + +/* C-API that requires previous API to be defined */ + +#define PyArray_DescrCheck(op) PyObject_TypeCheck(op, &PyArrayDescr_Type) + +#define PyArray_Check(op) PyObject_TypeCheck(op, &PyArray_Type) +#define PyArray_CheckExact(op) (((PyObject*)(op))->ob_type == &PyArray_Type) + +#define PyArray_HasArrayInterfaceType(op, type, context, out) \ + ((((out)=PyArray_FromStructInterface(op)) != Py_NotImplemented) || \ + (((out)=PyArray_FromInterface(op)) != Py_NotImplemented) || \ + (((out)=PyArray_FromArrayAttr(op, type, context)) != \ + Py_NotImplemented)) + +#define PyArray_HasArrayInterface(op, out) \ + PyArray_HasArrayInterfaceType(op, NULL, NULL, out) + +#define PyArray_IsZeroDim(op) (PyArray_Check(op) && \ + (PyArray_NDIM((PyArrayObject *)op) == 0)) + +#define PyArray_IsScalar(obj, cls) \ + (PyObject_TypeCheck(obj, &Py##cls##ArrType_Type)) + +#define PyArray_CheckScalar(m) (PyArray_IsScalar(m, Generic) || \ + PyArray_IsZeroDim(m)) +#define PyArray_IsPythonNumber(obj) \ + (PyFloat_Check(obj) || PyComplex_Check(obj) || \ + PyLong_Check(obj) || PyBool_Check(obj)) +#define PyArray_IsIntegerScalar(obj) (PyLong_Check(obj) \ + || PyArray_IsScalar((obj), Integer)) +#define PyArray_IsPythonScalar(obj) \ + (PyArray_IsPythonNumber(obj) || PyBytes_Check(obj) || \ + PyUnicode_Check(obj)) + +#define PyArray_IsAnyScalar(obj) \ + (PyArray_IsScalar(obj, Generic) || PyArray_IsPythonScalar(obj)) + +#define PyArray_CheckAnyScalar(obj) (PyArray_IsPythonScalar(obj) || \ + PyArray_CheckScalar(obj)) + + +#define PyArray_GETCONTIGUOUS(m) (PyArray_ISCONTIGUOUS(m) ? \ + Py_INCREF(m), (m) : \ + (PyArrayObject *)(PyArray_Copy(m))) + +#define PyArray_SAMESHAPE(a1,a2) ((PyArray_NDIM(a1) == PyArray_NDIM(a2)) && \ + PyArray_CompareLists(PyArray_DIMS(a1), \ + PyArray_DIMS(a2), \ + PyArray_NDIM(a1))) + +#define PyArray_SIZE(m) PyArray_MultiplyList(PyArray_DIMS(m), PyArray_NDIM(m)) +#define PyArray_NBYTES(m) (PyArray_ITEMSIZE(m) * PyArray_SIZE(m)) +#define PyArray_FROM_O(m) PyArray_FromAny(m, NULL, 0, 0, 0, NULL) + +#define PyArray_FROM_OF(m,flags) PyArray_CheckFromAny(m, NULL, 0, 0, flags, \ + NULL) + +#define PyArray_FROM_OT(m,type) PyArray_FromAny(m, \ + PyArray_DescrFromType(type), 0, 0, 0, NULL) + +#define PyArray_FROM_OTF(m, type, flags) \ + PyArray_FromAny(m, PyArray_DescrFromType(type), 0, 0, \ + (((flags) & NPY_ARRAY_ENSURECOPY) ? \ + ((flags) | NPY_ARRAY_DEFAULT) : (flags)), NULL) + +#define PyArray_FROMANY(m, type, min, max, flags) \ + PyArray_FromAny(m, PyArray_DescrFromType(type), min, max, \ + (((flags) & NPY_ARRAY_ENSURECOPY) ? \ + (flags) | NPY_ARRAY_DEFAULT : (flags)), NULL) + +#define PyArray_ZEROS(m, dims, type, is_f_order) \ + PyArray_Zeros(m, dims, PyArray_DescrFromType(type), is_f_order) + +#define PyArray_EMPTY(m, dims, type, is_f_order) \ + PyArray_Empty(m, dims, PyArray_DescrFromType(type), is_f_order) + +#define PyArray_FILLWBYTE(obj, val) memset(PyArray_DATA(obj), val, \ + PyArray_NBYTES(obj)) + +#define PyArray_ContiguousFromAny(op, type, min_depth, max_depth) \ + PyArray_FromAny(op, PyArray_DescrFromType(type), min_depth, \ + max_depth, NPY_ARRAY_DEFAULT, NULL) + +#define PyArray_EquivArrTypes(a1, a2) \ + PyArray_EquivTypes(PyArray_DESCR(a1), PyArray_DESCR(a2)) + +#define PyArray_EquivByteorders(b1, b2) \ + (((b1) == (b2)) || (PyArray_ISNBO(b1) == PyArray_ISNBO(b2))) + +#define PyArray_SimpleNew(nd, dims, typenum) \ + PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, NULL, 0, 0, NULL) + +#define PyArray_SimpleNewFromData(nd, dims, typenum, data) \ + PyArray_New(&PyArray_Type, nd, dims, typenum, NULL, \ + data, 0, NPY_ARRAY_CARRAY, NULL) + +#define PyArray_SimpleNewFromDescr(nd, dims, descr) \ + PyArray_NewFromDescr(&PyArray_Type, descr, nd, dims, \ + NULL, NULL, 0, NULL) + +#define PyArray_ToScalar(data, arr) \ + PyArray_Scalar(data, PyArray_DESCR(arr), (PyObject *)arr) + + +/* These might be faster without the dereferencing of obj + going on inside -- of course an optimizing compiler should + inline the constants inside a for loop making it a moot point +*/ + +#define PyArray_GETPTR1(obj, i) ((void *)(PyArray_BYTES(obj) + \ + (i)*PyArray_STRIDES(obj)[0])) + +#define PyArray_GETPTR2(obj, i, j) ((void *)(PyArray_BYTES(obj) + \ + (i)*PyArray_STRIDES(obj)[0] + \ + (j)*PyArray_STRIDES(obj)[1])) + +#define PyArray_GETPTR3(obj, i, j, k) ((void *)(PyArray_BYTES(obj) + \ + (i)*PyArray_STRIDES(obj)[0] + \ + (j)*PyArray_STRIDES(obj)[1] + \ + (k)*PyArray_STRIDES(obj)[2])) + +#define PyArray_GETPTR4(obj, i, j, k, l) ((void *)(PyArray_BYTES(obj) + \ + (i)*PyArray_STRIDES(obj)[0] + \ + (j)*PyArray_STRIDES(obj)[1] + \ + (k)*PyArray_STRIDES(obj)[2] + \ + (l)*PyArray_STRIDES(obj)[3])) + +static inline void +PyArray_DiscardWritebackIfCopy(PyArrayObject *arr) +{ + PyArrayObject_fields *fa = (PyArrayObject_fields *)arr; + if (fa && fa->base) { + if (fa->flags & NPY_ARRAY_WRITEBACKIFCOPY) { + PyArray_ENABLEFLAGS((PyArrayObject*)fa->base, NPY_ARRAY_WRITEABLE); + Py_DECREF(fa->base); + fa->base = NULL; + PyArray_CLEARFLAGS(arr, NPY_ARRAY_WRITEBACKIFCOPY); + } + } +} + +#define PyArray_DESCR_REPLACE(descr) do { \ + PyArray_Descr *_new_; \ + _new_ = PyArray_DescrNew(descr); \ + Py_XDECREF(descr); \ + descr = _new_; \ + } while(0) + +/* Copy should always return contiguous array */ +#define PyArray_Copy(obj) PyArray_NewCopy(obj, NPY_CORDER) + +#define PyArray_FromObject(op, type, min_depth, max_depth) \ + PyArray_FromAny(op, PyArray_DescrFromType(type), min_depth, \ + max_depth, NPY_ARRAY_BEHAVED | \ + NPY_ARRAY_ENSUREARRAY, NULL) + +#define PyArray_ContiguousFromObject(op, type, min_depth, max_depth) \ + PyArray_FromAny(op, PyArray_DescrFromType(type), min_depth, \ + max_depth, NPY_ARRAY_DEFAULT | \ + NPY_ARRAY_ENSUREARRAY, NULL) + +#define PyArray_CopyFromObject(op, type, min_depth, max_depth) \ + PyArray_FromAny(op, PyArray_DescrFromType(type), min_depth, \ + max_depth, NPY_ARRAY_ENSURECOPY | \ + NPY_ARRAY_DEFAULT | \ + NPY_ARRAY_ENSUREARRAY, NULL) + +#define PyArray_Cast(mp, type_num) \ + PyArray_CastToType(mp, PyArray_DescrFromType(type_num), 0) + +#define PyArray_Take(ap, items, axis) \ + PyArray_TakeFrom(ap, items, axis, NULL, NPY_RAISE) + +#define PyArray_Put(ap, items, values) \ + PyArray_PutTo(ap, items, values, NPY_RAISE) + + +/* + Check to see if this key in the dictionary is the "title" + entry of the tuple (i.e. a duplicate dictionary entry in the fields + dict). +*/ + +static inline int +NPY_TITLE_KEY_check(PyObject *key, PyObject *value) +{ + PyObject *title; + if (PyTuple_Size(value) != 3) { + return 0; + } + title = PyTuple_GetItem(value, 2); + if (key == title) { + return 1; + } +#ifdef PYPY_VERSION + /* + * On PyPy, dictionary keys do not always preserve object identity. + * Fall back to comparison by value. + */ + if (PyUnicode_Check(title) && PyUnicode_Check(key)) { + return PyUnicode_Compare(title, key) == 0 ? 1 : 0; + } +#endif + return 0; +} + +/* Macro, for backward compat with "if NPY_TITLE_KEY(key, value) { ..." */ +#define NPY_TITLE_KEY(key, value) (NPY_TITLE_KEY_check((key), (value))) + +#define DEPRECATE(msg) PyErr_WarnEx(PyExc_DeprecationWarning,msg,1) +#define DEPRECATE_FUTUREWARNING(msg) PyErr_WarnEx(PyExc_FutureWarning,msg,1) + + +/* + * These macros and functions unfortunately require runtime version checks + * that are only defined in `npy_2_compat.h`. For that reasons they cannot be + * part of `ndarraytypes.h` which tries to be self contained. + */ + +static inline npy_intp +PyArray_ITEMSIZE(const PyArrayObject *arr) +{ + return PyDataType_ELSIZE(((PyArrayObject_fields *)arr)->descr); +} + +#define PyDataType_HASFIELDS(obj) (PyDataType_ISLEGACY((PyArray_Descr*)(obj)) && PyDataType_NAMES((PyArray_Descr*)(obj)) != NULL) +#define PyDataType_HASSUBARRAY(dtype) (PyDataType_ISLEGACY(dtype) && PyDataType_SUBARRAY(dtype) != NULL) +#define PyDataType_ISUNSIZED(dtype) ((dtype)->elsize == 0 && \ + !PyDataType_HASFIELDS(dtype)) + +#define PyDataType_FLAGCHK(dtype, flag) \ + ((PyDataType_FLAGS(dtype) & (flag)) == (flag)) + +#define PyDataType_REFCHK(dtype) \ + PyDataType_FLAGCHK(dtype, NPY_ITEM_REFCOUNT) + +#define NPY_BEGIN_THREADS_DESCR(dtype) \ + do {if (!(PyDataType_FLAGCHK((dtype), NPY_NEEDS_PYAPI))) \ + NPY_BEGIN_THREADS;} while (0); + +#define NPY_END_THREADS_DESCR(dtype) \ + do {if (!(PyDataType_FLAGCHK((dtype), NPY_NEEDS_PYAPI))) \ + NPY_END_THREADS; } while (0); + +#if !(defined(NPY_INTERNAL_BUILD) && NPY_INTERNAL_BUILD) +/* The internal copy of this is now defined in `dtypemeta.h` */ +/* + * `PyArray_Scalar` is the same as this function but converts will convert + * most NumPy types to Python scalars. + */ +static inline PyObject * +PyArray_GETITEM(const PyArrayObject *arr, const char *itemptr) +{ + return PyDataType_GetArrFuncs(((PyArrayObject_fields *)arr)->descr)->getitem( + (void *)itemptr, (PyArrayObject *)arr); +} + +/* + * SETITEM should only be used if it is known that the value is a scalar + * and of a type understood by the arrays dtype. + * Use `PyArray_Pack` if the value may be of a different dtype. + */ +static inline int +PyArray_SETITEM(PyArrayObject *arr, char *itemptr, PyObject *v) +{ + return PyDataType_GetArrFuncs(((PyArrayObject_fields *)arr)->descr)->setitem(v, itemptr, arr); +} +#endif /* not internal */ + + +#ifdef __cplusplus +} +#endif + + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NDARRAYOBJECT_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/ndarraytypes.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/ndarraytypes.h new file mode 100644 index 0000000000000000000000000000000000000000..95821b0baff20eb8e7e389a2acbf2167c34b0174 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/ndarraytypes.h @@ -0,0 +1,1925 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NDARRAYTYPES_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NDARRAYTYPES_H_ + +#include "npy_common.h" +#include "npy_endian.h" +#include "npy_cpu.h" +#include "utils.h" + +#define NPY_NO_EXPORT NPY_VISIBILITY_HIDDEN + +/* Always allow threading unless it was explicitly disabled at build time */ +#if !NPY_NO_SMP + #define NPY_ALLOW_THREADS 1 +#else + #define NPY_ALLOW_THREADS 0 +#endif + +#ifndef __has_extension +#define __has_extension(x) 0 +#endif + +/* + * There are several places in the code where an array of dimensions + * is allocated statically. This is the size of that static + * allocation. + * + * The array creation itself could have arbitrary dimensions but all + * the places where static allocation is used would need to be changed + * to dynamic (including inside of several structures) + * + * As of NumPy 2.0, we strongly discourage the downstream use of NPY_MAXDIMS, + * but since auditing everything seems a big ask, define it as 64. + * A future version could: + * - Increase or remove the limit and require recompilation (like 2.0 did) + * - Deprecate or remove the macro but keep the limit (at basically any time) + */ +#define NPY_MAXDIMS 64 +/* We cannot change this as it would break ABI: */ +#define NPY_MAXDIMS_LEGACY_ITERS 32 +/* NPY_MAXARGS is version dependent and defined in npy_2_compat.h */ + +/* Used for Converter Functions "O&" code in ParseTuple */ +#define NPY_FAIL 0 +#define NPY_SUCCEED 1 + + +enum NPY_TYPES { NPY_BOOL=0, + NPY_BYTE, NPY_UBYTE, + NPY_SHORT, NPY_USHORT, + NPY_INT, NPY_UINT, + NPY_LONG, NPY_ULONG, + NPY_LONGLONG, NPY_ULONGLONG, + NPY_FLOAT, NPY_DOUBLE, NPY_LONGDOUBLE, + NPY_CFLOAT, NPY_CDOUBLE, NPY_CLONGDOUBLE, + NPY_OBJECT=17, + NPY_STRING, NPY_UNICODE, + NPY_VOID, + /* + * New 1.6 types appended, may be integrated + * into the above in 2.0. + */ + NPY_DATETIME, NPY_TIMEDELTA, NPY_HALF, + + NPY_CHAR, /* Deprecated, will raise if used */ + + /* The number of *legacy* dtypes */ + NPY_NTYPES_LEGACY=24, + + /* assign a high value to avoid changing this in the + future when new dtypes are added */ + NPY_NOTYPE=25, + + NPY_USERDEF=256, /* leave room for characters */ + + /* The number of types not including the new 1.6 types */ + NPY_NTYPES_ABI_COMPATIBLE=21, + + /* + * New DTypes which do not share the legacy layout + * (added after NumPy 2.0). VSTRING is the first of these + * we may open up a block for user-defined dtypes in the + * future. + */ + NPY_VSTRING=2056, +}; + + +/* basetype array priority */ +#define NPY_PRIORITY 0.0 + +/* default subtype priority */ +#define NPY_SUBTYPE_PRIORITY 1.0 + +/* default scalar priority */ +#define NPY_SCALAR_PRIORITY -1000000.0 + +/* How many floating point types are there (excluding half) */ +#define NPY_NUM_FLOATTYPE 3 + +/* + * These characters correspond to the array type and the struct + * module + */ + +enum NPY_TYPECHAR { + NPY_BOOLLTR = '?', + NPY_BYTELTR = 'b', + NPY_UBYTELTR = 'B', + NPY_SHORTLTR = 'h', + NPY_USHORTLTR = 'H', + NPY_INTLTR = 'i', + NPY_UINTLTR = 'I', + NPY_LONGLTR = 'l', + NPY_ULONGLTR = 'L', + NPY_LONGLONGLTR = 'q', + NPY_ULONGLONGLTR = 'Q', + NPY_HALFLTR = 'e', + NPY_FLOATLTR = 'f', + NPY_DOUBLELTR = 'd', + NPY_LONGDOUBLELTR = 'g', + NPY_CFLOATLTR = 'F', + NPY_CDOUBLELTR = 'D', + NPY_CLONGDOUBLELTR = 'G', + NPY_OBJECTLTR = 'O', + NPY_STRINGLTR = 'S', + NPY_DEPRECATED_STRINGLTR2 = 'a', + NPY_UNICODELTR = 'U', + NPY_VOIDLTR = 'V', + NPY_DATETIMELTR = 'M', + NPY_TIMEDELTALTR = 'm', + NPY_CHARLTR = 'c', + + /* + * New non-legacy DTypes + */ + NPY_VSTRINGLTR = 'T', + + /* + * Note, we removed `NPY_INTPLTR` due to changing its definition + * to 'n', rather than 'p'. On any typical platform this is the + * same integer. 'n' should be used for the `np.intp` with the same + * size as `size_t` while 'p' remains pointer sized. + * + * 'p', 'P', 'n', and 'N' are valid and defined explicitly + * in `arraytypes.c.src`. + */ + + /* + * These are for dtype 'kinds', not dtype 'typecodes' + * as the above are for. + */ + NPY_GENBOOLLTR ='b', + NPY_SIGNEDLTR = 'i', + NPY_UNSIGNEDLTR = 'u', + NPY_FLOATINGLTR = 'f', + NPY_COMPLEXLTR = 'c', + +}; + +/* + * Changing this may break Numpy API compatibility + * due to changing offsets in PyArray_ArrFuncs, so be + * careful. Here we have reused the mergesort slot for + * any kind of stable sort, the actual implementation will + * depend on the data type. + */ +typedef enum { + _NPY_SORT_UNDEFINED=-1, + NPY_QUICKSORT=0, + NPY_HEAPSORT=1, + NPY_MERGESORT=2, + NPY_STABLESORT=2, +} NPY_SORTKIND; +#define NPY_NSORTS (NPY_STABLESORT + 1) + + +typedef enum { + NPY_INTROSELECT=0 +} NPY_SELECTKIND; +#define NPY_NSELECTS (NPY_INTROSELECT + 1) + + +typedef enum { + NPY_SEARCHLEFT=0, + NPY_SEARCHRIGHT=1 +} NPY_SEARCHSIDE; +#define NPY_NSEARCHSIDES (NPY_SEARCHRIGHT + 1) + + +typedef enum { + NPY_NOSCALAR=-1, + NPY_BOOL_SCALAR, + NPY_INTPOS_SCALAR, + NPY_INTNEG_SCALAR, + NPY_FLOAT_SCALAR, + NPY_COMPLEX_SCALAR, + NPY_OBJECT_SCALAR +} NPY_SCALARKIND; +#define NPY_NSCALARKINDS (NPY_OBJECT_SCALAR + 1) + +/* For specifying array memory layout or iteration order */ +typedef enum { + /* Fortran order if inputs are all Fortran, C otherwise */ + NPY_ANYORDER=-1, + /* C order */ + NPY_CORDER=0, + /* Fortran order */ + NPY_FORTRANORDER=1, + /* An order as close to the inputs as possible */ + NPY_KEEPORDER=2 +} NPY_ORDER; + +/* For specifying allowed casting in operations which support it */ +typedef enum { + _NPY_ERROR_OCCURRED_IN_CAST = -1, + /* Only allow identical types */ + NPY_NO_CASTING=0, + /* Allow identical and byte swapped types */ + NPY_EQUIV_CASTING=1, + /* Only allow safe casts */ + NPY_SAFE_CASTING=2, + /* Allow safe casts or casts within the same kind */ + NPY_SAME_KIND_CASTING=3, + /* Allow any casts */ + NPY_UNSAFE_CASTING=4, +} NPY_CASTING; + +typedef enum { + NPY_CLIP=0, + NPY_WRAP=1, + NPY_RAISE=2 +} NPY_CLIPMODE; + +typedef enum { + NPY_VALID=0, + NPY_SAME=1, + NPY_FULL=2 +} NPY_CORRELATEMODE; + +/* The special not-a-time (NaT) value */ +#define NPY_DATETIME_NAT NPY_MIN_INT64 + +/* + * Upper bound on the length of a DATETIME ISO 8601 string + * YEAR: 21 (64-bit year) + * MONTH: 3 + * DAY: 3 + * HOURS: 3 + * MINUTES: 3 + * SECONDS: 3 + * ATTOSECONDS: 1 + 3*6 + * TIMEZONE: 5 + * NULL TERMINATOR: 1 + */ +#define NPY_DATETIME_MAX_ISO8601_STRLEN (21 + 3*5 + 1 + 3*6 + 6 + 1) + +/* The FR in the unit names stands for frequency */ +typedef enum { + /* Force signed enum type, must be -1 for code compatibility */ + NPY_FR_ERROR = -1, /* error or undetermined */ + + /* Start of valid units */ + NPY_FR_Y = 0, /* Years */ + NPY_FR_M = 1, /* Months */ + NPY_FR_W = 2, /* Weeks */ + /* Gap where 1.6 NPY_FR_B (value 3) was */ + NPY_FR_D = 4, /* Days */ + NPY_FR_h = 5, /* hours */ + NPY_FR_m = 6, /* minutes */ + NPY_FR_s = 7, /* seconds */ + NPY_FR_ms = 8, /* milliseconds */ + NPY_FR_us = 9, /* microseconds */ + NPY_FR_ns = 10, /* nanoseconds */ + NPY_FR_ps = 11, /* picoseconds */ + NPY_FR_fs = 12, /* femtoseconds */ + NPY_FR_as = 13, /* attoseconds */ + NPY_FR_GENERIC = 14 /* unbound units, can convert to anything */ +} NPY_DATETIMEUNIT; + +/* + * NOTE: With the NPY_FR_B gap for 1.6 ABI compatibility, NPY_DATETIME_NUMUNITS + * is technically one more than the actual number of units. + */ +#define NPY_DATETIME_NUMUNITS (NPY_FR_GENERIC + 1) +#define NPY_DATETIME_DEFAULTUNIT NPY_FR_GENERIC + +/* + * Business day conventions for mapping invalid business + * days to valid business days. + */ +typedef enum { + /* Go forward in time to the following business day. */ + NPY_BUSDAY_FORWARD, + NPY_BUSDAY_FOLLOWING = NPY_BUSDAY_FORWARD, + /* Go backward in time to the preceding business day. */ + NPY_BUSDAY_BACKWARD, + NPY_BUSDAY_PRECEDING = NPY_BUSDAY_BACKWARD, + /* + * Go forward in time to the following business day, unless it + * crosses a month boundary, in which case go backward + */ + NPY_BUSDAY_MODIFIEDFOLLOWING, + /* + * Go backward in time to the preceding business day, unless it + * crosses a month boundary, in which case go forward. + */ + NPY_BUSDAY_MODIFIEDPRECEDING, + /* Produce a NaT for non-business days. */ + NPY_BUSDAY_NAT, + /* Raise an exception for non-business days. */ + NPY_BUSDAY_RAISE +} NPY_BUSDAY_ROLL; + + +/************************************************************ + * NumPy Auxiliary Data for inner loops, sort functions, etc. + ************************************************************/ + +/* + * When creating an auxiliary data struct, this should always appear + * as the first member, like this: + * + * typedef struct { + * NpyAuxData base; + * double constant; + * } constant_multiplier_aux_data; + */ +typedef struct NpyAuxData_tag NpyAuxData; + +/* Function pointers for freeing or cloning auxiliary data */ +typedef void (NpyAuxData_FreeFunc) (NpyAuxData *); +typedef NpyAuxData *(NpyAuxData_CloneFunc) (NpyAuxData *); + +struct NpyAuxData_tag { + NpyAuxData_FreeFunc *free; + NpyAuxData_CloneFunc *clone; + /* To allow for a bit of expansion without breaking the ABI */ + void *reserved[2]; +}; + +/* Macros to use for freeing and cloning auxiliary data */ +#define NPY_AUXDATA_FREE(auxdata) \ + do { \ + if ((auxdata) != NULL) { \ + (auxdata)->free(auxdata); \ + } \ + } while(0) +#define NPY_AUXDATA_CLONE(auxdata) \ + ((auxdata)->clone(auxdata)) + +#define NPY_ERR(str) fprintf(stderr, #str); fflush(stderr); +#define NPY_ERR2(str) fprintf(stderr, str); fflush(stderr); + +/* +* Macros to define how array, and dimension/strides data is +* allocated. These should be made private +*/ + +#define NPY_USE_PYMEM 1 + + +#if NPY_USE_PYMEM == 1 +/* use the Raw versions which are safe to call with the GIL released */ +#define PyArray_malloc PyMem_RawMalloc +#define PyArray_free PyMem_RawFree +#define PyArray_realloc PyMem_RawRealloc +#else +#define PyArray_malloc malloc +#define PyArray_free free +#define PyArray_realloc realloc +#endif + +/* Dimensions and strides */ +#define PyDimMem_NEW(size) \ + ((npy_intp *)PyArray_malloc(size*sizeof(npy_intp))) + +#define PyDimMem_FREE(ptr) PyArray_free(ptr) + +#define PyDimMem_RENEW(ptr,size) \ + ((npy_intp *)PyArray_realloc(ptr,size*sizeof(npy_intp))) + +/* forward declaration */ +struct _PyArray_Descr; + +/* These must deal with unaligned and swapped data if necessary */ +typedef PyObject * (PyArray_GetItemFunc) (void *, void *); +typedef int (PyArray_SetItemFunc)(PyObject *, void *, void *); + +typedef void (PyArray_CopySwapNFunc)(void *, npy_intp, void *, npy_intp, + npy_intp, int, void *); + +typedef void (PyArray_CopySwapFunc)(void *, void *, int, void *); +typedef npy_bool (PyArray_NonzeroFunc)(void *, void *); + + +/* + * These assume aligned and notswapped data -- a buffer will be used + * before or contiguous data will be obtained + */ + +typedef int (PyArray_CompareFunc)(const void *, const void *, void *); +typedef int (PyArray_ArgFunc)(void*, npy_intp, npy_intp*, void *); + +typedef void (PyArray_DotFunc)(void *, npy_intp, void *, npy_intp, void *, + npy_intp, void *); + +typedef void (PyArray_VectorUnaryFunc)(void *, void *, npy_intp, void *, + void *); + +/* + * XXX the ignore argument should be removed next time the API version + * is bumped. It used to be the separator. + */ +typedef int (PyArray_ScanFunc)(FILE *fp, void *dptr, + char *ignore, struct _PyArray_Descr *); +typedef int (PyArray_FromStrFunc)(char *s, void *dptr, char **endptr, + struct _PyArray_Descr *); + +typedef int (PyArray_FillFunc)(void *, npy_intp, void *); + +typedef int (PyArray_SortFunc)(void *, npy_intp, void *); +typedef int (PyArray_ArgSortFunc)(void *, npy_intp *, npy_intp, void *); + +typedef int (PyArray_FillWithScalarFunc)(void *, npy_intp, void *, void *); + +typedef int (PyArray_ScalarKindFunc)(void *); + +typedef struct { + npy_intp *ptr; + int len; +} PyArray_Dims; + +typedef struct { + /* + * Functions to cast to most other standard types + * Can have some NULL entries. The types + * DATETIME, TIMEDELTA, and HALF go into the castdict + * even though they are built-in. + */ + PyArray_VectorUnaryFunc *cast[NPY_NTYPES_ABI_COMPATIBLE]; + + /* The next four functions *cannot* be NULL */ + + /* + * Functions to get and set items with standard Python types + * -- not array scalars + */ + PyArray_GetItemFunc *getitem; + PyArray_SetItemFunc *setitem; + + /* + * Copy and/or swap data. Memory areas may not overlap + * Use memmove first if they might + */ + PyArray_CopySwapNFunc *copyswapn; + PyArray_CopySwapFunc *copyswap; + + /* + * Function to compare items + * Can be NULL + */ + PyArray_CompareFunc *compare; + + /* + * Function to select largest + * Can be NULL + */ + PyArray_ArgFunc *argmax; + + /* + * Function to compute dot product + * Can be NULL + */ + PyArray_DotFunc *dotfunc; + + /* + * Function to scan an ASCII file and + * place a single value plus possible separator + * Can be NULL + */ + PyArray_ScanFunc *scanfunc; + + /* + * Function to read a single value from a string + * and adjust the pointer; Can be NULL + */ + PyArray_FromStrFunc *fromstr; + + /* + * Function to determine if data is zero or not + * If NULL a default version is + * used at Registration time. + */ + PyArray_NonzeroFunc *nonzero; + + /* + * Used for arange. Should return 0 on success + * and -1 on failure. + * Can be NULL. + */ + PyArray_FillFunc *fill; + + /* + * Function to fill arrays with scalar values + * Can be NULL + */ + PyArray_FillWithScalarFunc *fillwithscalar; + + /* + * Sorting functions + * Can be NULL + */ + PyArray_SortFunc *sort[NPY_NSORTS]; + PyArray_ArgSortFunc *argsort[NPY_NSORTS]; + + /* + * Dictionary of additional casting functions + * PyArray_VectorUnaryFuncs + * which can be populated to support casting + * to other registered types. Can be NULL + */ + PyObject *castdict; + + /* + * Functions useful for generalizing + * the casting rules. + * Can be NULL; + */ + PyArray_ScalarKindFunc *scalarkind; + int **cancastscalarkindto; + int *cancastto; + + void *_unused1; + void *_unused2; + void *_unused3; + + /* + * Function to select smallest + * Can be NULL + */ + PyArray_ArgFunc *argmin; + +} PyArray_ArrFuncs; + + +/* The item must be reference counted when it is inserted or extracted. */ +#define NPY_ITEM_REFCOUNT 0x01 +/* Same as needing REFCOUNT */ +#define NPY_ITEM_HASOBJECT 0x01 +/* Convert to list for pickling */ +#define NPY_LIST_PICKLE 0x02 +/* The item is a POINTER */ +#define NPY_ITEM_IS_POINTER 0x04 +/* memory needs to be initialized for this data-type */ +#define NPY_NEEDS_INIT 0x08 +/* operations need Python C-API so don't give-up thread. */ +#define NPY_NEEDS_PYAPI 0x10 +/* Use f.getitem when extracting elements of this data-type */ +#define NPY_USE_GETITEM 0x20 +/* Use f.setitem when setting creating 0-d array from this data-type.*/ +#define NPY_USE_SETITEM 0x40 +/* A sticky flag specifically for structured arrays */ +#define NPY_ALIGNED_STRUCT 0x80 + +/* + *These are inherited for global data-type if any data-types in the + * field have them + */ +#define NPY_FROM_FIELDS (NPY_NEEDS_INIT | NPY_LIST_PICKLE | \ + NPY_ITEM_REFCOUNT | NPY_NEEDS_PYAPI) + +#define NPY_OBJECT_DTYPE_FLAGS (NPY_LIST_PICKLE | NPY_USE_GETITEM | \ + NPY_ITEM_IS_POINTER | NPY_ITEM_REFCOUNT | \ + NPY_NEEDS_INIT | NPY_NEEDS_PYAPI) + +#if NPY_FEATURE_VERSION >= NPY_2_0_API_VERSION +/* + * Public version of the Descriptor struct as of 2.x + */ +typedef struct _PyArray_Descr { + PyObject_HEAD + /* + * the type object representing an + * instance of this type -- should not + * be two type_numbers with the same type + * object. + */ + PyTypeObject *typeobj; + /* kind for this type */ + char kind; + /* unique-character representing this type */ + char type; + /* + * '>' (big), '<' (little), '|' + * (not-applicable), or '=' (native). + */ + char byteorder; + /* Former flags flags space (unused) to ensure type_num is stable. */ + char _former_flags; + /* number representing this type */ + int type_num; + /* Space for dtype instance specific flags. */ + npy_uint64 flags; + /* element size (itemsize) for this type */ + npy_intp elsize; + /* alignment needed for this type */ + npy_intp alignment; + /* metadata dict or NULL */ + PyObject *metadata; + /* Cached hash value (-1 if not yet computed). */ + npy_hash_t hash; + /* Unused slot (must be initialized to NULL) for future use */ + void *reserved_null[2]; +} PyArray_Descr; + +#else /* 1.x and 2.x compatible version (only shared fields): */ + +typedef struct _PyArray_Descr { + PyObject_HEAD + PyTypeObject *typeobj; + char kind; + char type; + char byteorder; + char _former_flags; + int type_num; +} PyArray_Descr; + +/* To access modified fields, define the full 2.0 struct: */ +typedef struct { + PyObject_HEAD + PyTypeObject *typeobj; + char kind; + char type; + char byteorder; + char _former_flags; + int type_num; + npy_uint64 flags; + npy_intp elsize; + npy_intp alignment; + PyObject *metadata; + npy_hash_t hash; + void *reserved_null[2]; +} _PyArray_DescrNumPy2; + +#endif /* 1.x and 2.x compatible version */ + +/* + * Semi-private struct with additional field of legacy descriptors (must + * check NPY_DT_is_legacy before casting/accessing). The struct is also not + * valid when running on 1.x (i.e. in public API use). + */ +typedef struct { + PyObject_HEAD + PyTypeObject *typeobj; + char kind; + char type; + char byteorder; + char _former_flags; + int type_num; + npy_uint64 flags; + npy_intp elsize; + npy_intp alignment; + PyObject *metadata; + npy_hash_t hash; + void *reserved_null[2]; + struct _arr_descr *subarray; + PyObject *fields; + PyObject *names; + NpyAuxData *c_metadata; +} _PyArray_LegacyDescr; + + +/* + * Umodified PyArray_Descr struct identical to NumPy 1.x. This struct is + * used as a prototype for registering a new legacy DType. + * It is also used to access the fields in user code running on 1.x. + */ +typedef struct { + PyObject_HEAD + PyTypeObject *typeobj; + char kind; + char type; + char byteorder; + char flags; + int type_num; + int elsize; + int alignment; + struct _arr_descr *subarray; + PyObject *fields; + PyObject *names; + PyArray_ArrFuncs *f; + PyObject *metadata; + NpyAuxData *c_metadata; + npy_hash_t hash; +} PyArray_DescrProto; + + +typedef struct _arr_descr { + PyArray_Descr *base; + PyObject *shape; /* a tuple */ +} PyArray_ArrayDescr; + +/* + * Memory handler structure for array data. + */ +/* The declaration of free differs from PyMemAllocatorEx */ +typedef struct { + void *ctx; + void* (*malloc) (void *ctx, size_t size); + void* (*calloc) (void *ctx, size_t nelem, size_t elsize); + void* (*realloc) (void *ctx, void *ptr, size_t new_size); + void (*free) (void *ctx, void *ptr, size_t size); + /* + * This is the end of the version=1 struct. Only add new fields after + * this line + */ +} PyDataMemAllocator; + +typedef struct { + char name[127]; /* multiple of 64 to keep the struct aligned */ + uint8_t version; /* currently 1 */ + PyDataMemAllocator allocator; +} PyDataMem_Handler; + + +/* + * The main array object structure. + * + * It has been recommended to use the inline functions defined below + * (PyArray_DATA and friends) to access fields here for a number of + * releases. Direct access to the members themselves is deprecated. + * To ensure that your code does not use deprecated access, + * #define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION + * (or NPY_1_8_API_VERSION or higher as required). + */ +/* This struct will be moved to a private header in a future release */ +typedef struct tagPyArrayObject_fields { + PyObject_HEAD + /* Pointer to the raw data buffer */ + char *data; + /* The number of dimensions, also called 'ndim' */ + int nd; + /* The size in each dimension, also called 'shape' */ + npy_intp *dimensions; + /* + * Number of bytes to jump to get to the + * next element in each dimension + */ + npy_intp *strides; + /* + * This object is decref'd upon + * deletion of array. Except in the + * case of WRITEBACKIFCOPY which has + * special handling. + * + * For views it points to the original + * array, collapsed so no chains of + * views occur. + * + * For creation from buffer object it + * points to an object that should be + * decref'd on deletion + * + * For WRITEBACKIFCOPY flag this is an + * array to-be-updated upon calling + * PyArray_ResolveWritebackIfCopy + */ + PyObject *base; + /* Pointer to type structure */ + PyArray_Descr *descr; + /* Flags describing array -- see below */ + int flags; + /* For weak references */ + PyObject *weakreflist; +#if NPY_FEATURE_VERSION >= NPY_1_20_API_VERSION + void *_buffer_info; /* private buffer info, tagged to allow warning */ +#endif + /* + * For malloc/calloc/realloc/free per object + */ +#if NPY_FEATURE_VERSION >= NPY_1_22_API_VERSION + PyObject *mem_handler; +#endif +} PyArrayObject_fields; + +/* + * To hide the implementation details, we only expose + * the Python struct HEAD. + */ +#if !defined(NPY_NO_DEPRECATED_API) || \ + (NPY_NO_DEPRECATED_API < NPY_1_7_API_VERSION) +/* + * Can't put this in npy_deprecated_api.h like the others. + * PyArrayObject field access is deprecated as of NumPy 1.7. + */ +typedef PyArrayObject_fields PyArrayObject; +#else +typedef struct tagPyArrayObject { + PyObject_HEAD +} PyArrayObject; +#endif + +/* + * Removed 2020-Nov-25, NumPy 1.20 + * #define NPY_SIZEOF_PYARRAYOBJECT (sizeof(PyArrayObject_fields)) + * + * The above macro was removed as it gave a false sense of a stable ABI + * with respect to the structures size. If you require a runtime constant, + * you can use `PyArray_Type.tp_basicsize` instead. Otherwise, please + * see the PyArrayObject documentation or ask the NumPy developers for + * information on how to correctly replace the macro in a way that is + * compatible with multiple NumPy versions. + */ + +/* Mirrors buffer object to ptr */ + +typedef struct { + PyObject_HEAD + PyObject *base; + void *ptr; + npy_intp len; + int flags; +} PyArray_Chunk; + +typedef struct { + NPY_DATETIMEUNIT base; + int num; +} PyArray_DatetimeMetaData; + +typedef struct { + NpyAuxData base; + PyArray_DatetimeMetaData meta; +} PyArray_DatetimeDTypeMetaData; + +/* + * This structure contains an exploded view of a date-time value. + * NaT is represented by year == NPY_DATETIME_NAT. + */ +typedef struct { + npy_int64 year; + npy_int32 month, day, hour, min, sec, us, ps, as; +} npy_datetimestruct; + +/* This is not used internally. */ +typedef struct { + npy_int64 day; + npy_int32 sec, us, ps, as; +} npy_timedeltastruct; + +typedef int (PyArray_FinalizeFunc)(PyArrayObject *, PyObject *); + +/* + * Means c-style contiguous (last index varies the fastest). The data + * elements right after each other. + * + * This flag may be requested in constructor functions. + * This flag may be tested for in PyArray_FLAGS(arr). + */ +#define NPY_ARRAY_C_CONTIGUOUS 0x0001 + +/* + * Set if array is a contiguous Fortran array: the first index varies + * the fastest in memory (strides array is reverse of C-contiguous + * array) + * + * This flag may be requested in constructor functions. + * This flag may be tested for in PyArray_FLAGS(arr). + */ +#define NPY_ARRAY_F_CONTIGUOUS 0x0002 + +/* + * Note: all 0-d arrays are C_CONTIGUOUS and F_CONTIGUOUS. If a + * 1-d array is C_CONTIGUOUS it is also F_CONTIGUOUS. Arrays with + * more then one dimension can be C_CONTIGUOUS and F_CONTIGUOUS + * at the same time if they have either zero or one element. + * A higher dimensional array always has the same contiguity flags as + * `array.squeeze()`; dimensions with `array.shape[dimension] == 1` are + * effectively ignored when checking for contiguity. + */ + +/* + * If set, the array owns the data: it will be free'd when the array + * is deleted. + * + * This flag may be tested for in PyArray_FLAGS(arr). + */ +#define NPY_ARRAY_OWNDATA 0x0004 + +/* + * An array never has the next four set; they're only used as parameter + * flags to the various FromAny functions + * + * This flag may be requested in constructor functions. + */ + +/* Cause a cast to occur regardless of whether or not it is safe. */ +#define NPY_ARRAY_FORCECAST 0x0010 + +/* + * Always copy the array. Returned arrays are always CONTIGUOUS, + * ALIGNED, and WRITEABLE. See also: NPY_ARRAY_ENSURENOCOPY = 0x4000. + * + * This flag may be requested in constructor functions. + */ +#define NPY_ARRAY_ENSURECOPY 0x0020 + +/* + * Make sure the returned array is a base-class ndarray + * + * This flag may be requested in constructor functions. + */ +#define NPY_ARRAY_ENSUREARRAY 0x0040 + +/* + * Make sure that the strides are in units of the element size Needed + * for some operations with record-arrays. + * + * This flag may be requested in constructor functions. + */ +#define NPY_ARRAY_ELEMENTSTRIDES 0x0080 + +/* + * Array data is aligned on the appropriate memory address for the type + * stored according to how the compiler would align things (e.g., an + * array of integers (4 bytes each) starts on a memory address that's + * a multiple of 4) + * + * This flag may be requested in constructor functions. + * This flag may be tested for in PyArray_FLAGS(arr). + */ +#define NPY_ARRAY_ALIGNED 0x0100 + +/* + * Array data has the native endianness + * + * This flag may be requested in constructor functions. + */ +#define NPY_ARRAY_NOTSWAPPED 0x0200 + +/* + * Array data is writeable + * + * This flag may be requested in constructor functions. + * This flag may be tested for in PyArray_FLAGS(arr). + */ +#define NPY_ARRAY_WRITEABLE 0x0400 + +/* + * If this flag is set, then base contains a pointer to an array of + * the same size that should be updated with the current contents of + * this array when PyArray_ResolveWritebackIfCopy is called. + * + * This flag may be requested in constructor functions. + * This flag may be tested for in PyArray_FLAGS(arr). + */ +#define NPY_ARRAY_WRITEBACKIFCOPY 0x2000 + +/* + * No copy may be made while converting from an object/array (result is a view) + * + * This flag may be requested in constructor functions. + */ +#define NPY_ARRAY_ENSURENOCOPY 0x4000 + +/* + * NOTE: there are also internal flags defined in multiarray/arrayobject.h, + * which start at bit 31 and work down. + */ + +#define NPY_ARRAY_BEHAVED (NPY_ARRAY_ALIGNED | \ + NPY_ARRAY_WRITEABLE) +#define NPY_ARRAY_BEHAVED_NS (NPY_ARRAY_ALIGNED | \ + NPY_ARRAY_WRITEABLE | \ + NPY_ARRAY_NOTSWAPPED) +#define NPY_ARRAY_CARRAY (NPY_ARRAY_C_CONTIGUOUS | \ + NPY_ARRAY_BEHAVED) +#define NPY_ARRAY_CARRAY_RO (NPY_ARRAY_C_CONTIGUOUS | \ + NPY_ARRAY_ALIGNED) +#define NPY_ARRAY_FARRAY (NPY_ARRAY_F_CONTIGUOUS | \ + NPY_ARRAY_BEHAVED) +#define NPY_ARRAY_FARRAY_RO (NPY_ARRAY_F_CONTIGUOUS | \ + NPY_ARRAY_ALIGNED) +#define NPY_ARRAY_DEFAULT (NPY_ARRAY_CARRAY) +#define NPY_ARRAY_IN_ARRAY (NPY_ARRAY_CARRAY_RO) +#define NPY_ARRAY_OUT_ARRAY (NPY_ARRAY_CARRAY) +#define NPY_ARRAY_INOUT_ARRAY (NPY_ARRAY_CARRAY) +#define NPY_ARRAY_INOUT_ARRAY2 (NPY_ARRAY_CARRAY | \ + NPY_ARRAY_WRITEBACKIFCOPY) +#define NPY_ARRAY_IN_FARRAY (NPY_ARRAY_FARRAY_RO) +#define NPY_ARRAY_OUT_FARRAY (NPY_ARRAY_FARRAY) +#define NPY_ARRAY_INOUT_FARRAY (NPY_ARRAY_FARRAY) +#define NPY_ARRAY_INOUT_FARRAY2 (NPY_ARRAY_FARRAY | \ + NPY_ARRAY_WRITEBACKIFCOPY) + +#define NPY_ARRAY_UPDATE_ALL (NPY_ARRAY_C_CONTIGUOUS | \ + NPY_ARRAY_F_CONTIGUOUS | \ + NPY_ARRAY_ALIGNED) + +/* This flag is for the array interface, not PyArrayObject */ +#define NPY_ARR_HAS_DESCR 0x0800 + + + + +/* + * Size of internal buffers used for alignment Make BUFSIZE a multiple + * of sizeof(npy_cdouble) -- usually 16 so that ufunc buffers are aligned + */ +#define NPY_MIN_BUFSIZE ((int)sizeof(npy_cdouble)) +#define NPY_MAX_BUFSIZE (((int)sizeof(npy_cdouble))*1000000) +#define NPY_BUFSIZE 8192 +/* buffer stress test size: */ +/*#define NPY_BUFSIZE 17*/ + +/* + * C API: consists of Macros and functions. The MACROS are defined + * here. + */ + + +#define PyArray_ISCONTIGUOUS(m) PyArray_CHKFLAGS((m), NPY_ARRAY_C_CONTIGUOUS) +#define PyArray_ISWRITEABLE(m) PyArray_CHKFLAGS((m), NPY_ARRAY_WRITEABLE) +#define PyArray_ISALIGNED(m) PyArray_CHKFLAGS((m), NPY_ARRAY_ALIGNED) + +#define PyArray_IS_C_CONTIGUOUS(m) PyArray_CHKFLAGS((m), NPY_ARRAY_C_CONTIGUOUS) +#define PyArray_IS_F_CONTIGUOUS(m) PyArray_CHKFLAGS((m), NPY_ARRAY_F_CONTIGUOUS) + +/* the variable is used in some places, so always define it */ +#define NPY_BEGIN_THREADS_DEF PyThreadState *_save=NULL; +#if NPY_ALLOW_THREADS +#define NPY_BEGIN_ALLOW_THREADS Py_BEGIN_ALLOW_THREADS +#define NPY_END_ALLOW_THREADS Py_END_ALLOW_THREADS +#define NPY_BEGIN_THREADS do {_save = PyEval_SaveThread();} while (0); +#define NPY_END_THREADS do { if (_save) \ + { PyEval_RestoreThread(_save); _save = NULL;} } while (0); +#define NPY_BEGIN_THREADS_THRESHOLDED(loop_size) do { if ((loop_size) > 500) \ + { _save = PyEval_SaveThread();} } while (0); + + +#define NPY_ALLOW_C_API_DEF PyGILState_STATE __save__; +#define NPY_ALLOW_C_API do {__save__ = PyGILState_Ensure();} while (0); +#define NPY_DISABLE_C_API do {PyGILState_Release(__save__);} while (0); +#else +#define NPY_BEGIN_ALLOW_THREADS +#define NPY_END_ALLOW_THREADS +#define NPY_BEGIN_THREADS +#define NPY_END_THREADS +#define NPY_BEGIN_THREADS_THRESHOLDED(loop_size) +#define NPY_BEGIN_THREADS_DESCR(dtype) +#define NPY_END_THREADS_DESCR(dtype) +#define NPY_ALLOW_C_API_DEF +#define NPY_ALLOW_C_API +#define NPY_DISABLE_C_API +#endif + +/********************************** + * The nditer object, added in 1.6 + **********************************/ + +/* The actual structure of the iterator is an internal detail */ +typedef struct NpyIter_InternalOnly NpyIter; + +/* Iterator function pointers that may be specialized */ +typedef int (NpyIter_IterNextFunc)(NpyIter *iter); +typedef void (NpyIter_GetMultiIndexFunc)(NpyIter *iter, + npy_intp *outcoords); + +/*** Global flags that may be passed to the iterator constructors ***/ + +/* Track an index representing C order */ +#define NPY_ITER_C_INDEX 0x00000001 +/* Track an index representing Fortran order */ +#define NPY_ITER_F_INDEX 0x00000002 +/* Track a multi-index */ +#define NPY_ITER_MULTI_INDEX 0x00000004 +/* User code external to the iterator does the 1-dimensional innermost loop */ +#define NPY_ITER_EXTERNAL_LOOP 0x00000008 +/* Convert all the operands to a common data type */ +#define NPY_ITER_COMMON_DTYPE 0x00000010 +/* Operands may hold references, requiring API access during iteration */ +#define NPY_ITER_REFS_OK 0x00000020 +/* Zero-sized operands should be permitted, iteration checks IterSize for 0 */ +#define NPY_ITER_ZEROSIZE_OK 0x00000040 +/* Permits reductions (size-0 stride with dimension size > 1) */ +#define NPY_ITER_REDUCE_OK 0x00000080 +/* Enables sub-range iteration */ +#define NPY_ITER_RANGED 0x00000100 +/* Enables buffering */ +#define NPY_ITER_BUFFERED 0x00000200 +/* When buffering is enabled, grows the inner loop if possible */ +#define NPY_ITER_GROWINNER 0x00000400 +/* Delay allocation of buffers until first Reset* call */ +#define NPY_ITER_DELAY_BUFALLOC 0x00000800 +/* When NPY_KEEPORDER is specified, disable reversing negative-stride axes */ +#define NPY_ITER_DONT_NEGATE_STRIDES 0x00001000 +/* + * If output operands overlap with other operands (based on heuristics that + * has false positives but no false negatives), make temporary copies to + * eliminate overlap. + */ +#define NPY_ITER_COPY_IF_OVERLAP 0x00002000 + +/*** Per-operand flags that may be passed to the iterator constructors ***/ + +/* The operand will be read from and written to */ +#define NPY_ITER_READWRITE 0x00010000 +/* The operand will only be read from */ +#define NPY_ITER_READONLY 0x00020000 +/* The operand will only be written to */ +#define NPY_ITER_WRITEONLY 0x00040000 +/* The operand's data must be in native byte order */ +#define NPY_ITER_NBO 0x00080000 +/* The operand's data must be aligned */ +#define NPY_ITER_ALIGNED 0x00100000 +/* The operand's data must be contiguous (within the inner loop) */ +#define NPY_ITER_CONTIG 0x00200000 +/* The operand may be copied to satisfy requirements */ +#define NPY_ITER_COPY 0x00400000 +/* The operand may be copied with WRITEBACKIFCOPY to satisfy requirements */ +#define NPY_ITER_UPDATEIFCOPY 0x00800000 +/* Allocate the operand if it is NULL */ +#define NPY_ITER_ALLOCATE 0x01000000 +/* If an operand is allocated, don't use any subtype */ +#define NPY_ITER_NO_SUBTYPE 0x02000000 +/* This is a virtual array slot, operand is NULL but temporary data is there */ +#define NPY_ITER_VIRTUAL 0x04000000 +/* Require that the dimension match the iterator dimensions exactly */ +#define NPY_ITER_NO_BROADCAST 0x08000000 +/* A mask is being used on this array, affects buffer -> array copy */ +#define NPY_ITER_WRITEMASKED 0x10000000 +/* This array is the mask for all WRITEMASKED operands */ +#define NPY_ITER_ARRAYMASK 0x20000000 +/* Assume iterator order data access for COPY_IF_OVERLAP */ +#define NPY_ITER_OVERLAP_ASSUME_ELEMENTWISE 0x40000000 + +#define NPY_ITER_GLOBAL_FLAGS 0x0000ffff +#define NPY_ITER_PER_OP_FLAGS 0xffff0000 + + +/***************************** + * Basic iterator object + *****************************/ + +/* FWD declaration */ +typedef struct PyArrayIterObject_tag PyArrayIterObject; + +/* + * type of the function which translates a set of coordinates to a + * pointer to the data + */ +typedef char* (*npy_iter_get_dataptr_t)( + PyArrayIterObject* iter, const npy_intp*); + +struct PyArrayIterObject_tag { + PyObject_HEAD + int nd_m1; /* number of dimensions - 1 */ + npy_intp index, size; + npy_intp coordinates[NPY_MAXDIMS_LEGACY_ITERS];/* N-dimensional loop */ + npy_intp dims_m1[NPY_MAXDIMS_LEGACY_ITERS]; /* ao->dimensions - 1 */ + npy_intp strides[NPY_MAXDIMS_LEGACY_ITERS]; /* ao->strides or fake */ + npy_intp backstrides[NPY_MAXDIMS_LEGACY_ITERS];/* how far to jump back */ + npy_intp factors[NPY_MAXDIMS_LEGACY_ITERS]; /* shape factors */ + PyArrayObject *ao; + char *dataptr; /* pointer to current item*/ + npy_bool contiguous; + + npy_intp bounds[NPY_MAXDIMS_LEGACY_ITERS][2]; + npy_intp limits[NPY_MAXDIMS_LEGACY_ITERS][2]; + npy_intp limits_sizes[NPY_MAXDIMS_LEGACY_ITERS]; + npy_iter_get_dataptr_t translate; +} ; + + +/* Iterator API */ +#define PyArrayIter_Check(op) PyObject_TypeCheck((op), &PyArrayIter_Type) + +#define _PyAIT(it) ((PyArrayIterObject *)(it)) +#define PyArray_ITER_RESET(it) do { \ + _PyAIT(it)->index = 0; \ + _PyAIT(it)->dataptr = PyArray_BYTES(_PyAIT(it)->ao); \ + memset(_PyAIT(it)->coordinates, 0, \ + (_PyAIT(it)->nd_m1+1)*sizeof(npy_intp)); \ +} while (0) + +#define _PyArray_ITER_NEXT1(it) do { \ + (it)->dataptr += _PyAIT(it)->strides[0]; \ + (it)->coordinates[0]++; \ +} while (0) + +#define _PyArray_ITER_NEXT2(it) do { \ + if ((it)->coordinates[1] < (it)->dims_m1[1]) { \ + (it)->coordinates[1]++; \ + (it)->dataptr += (it)->strides[1]; \ + } \ + else { \ + (it)->coordinates[1] = 0; \ + (it)->coordinates[0]++; \ + (it)->dataptr += (it)->strides[0] - \ + (it)->backstrides[1]; \ + } \ +} while (0) + +#define PyArray_ITER_NEXT(it) do { \ + _PyAIT(it)->index++; \ + if (_PyAIT(it)->nd_m1 == 0) { \ + _PyArray_ITER_NEXT1(_PyAIT(it)); \ + } \ + else if (_PyAIT(it)->contiguous) \ + _PyAIT(it)->dataptr += PyArray_ITEMSIZE(_PyAIT(it)->ao); \ + else if (_PyAIT(it)->nd_m1 == 1) { \ + _PyArray_ITER_NEXT2(_PyAIT(it)); \ + } \ + else { \ + int __npy_i; \ + for (__npy_i=_PyAIT(it)->nd_m1; __npy_i >= 0; __npy_i--) { \ + if (_PyAIT(it)->coordinates[__npy_i] < \ + _PyAIT(it)->dims_m1[__npy_i]) { \ + _PyAIT(it)->coordinates[__npy_i]++; \ + _PyAIT(it)->dataptr += \ + _PyAIT(it)->strides[__npy_i]; \ + break; \ + } \ + else { \ + _PyAIT(it)->coordinates[__npy_i] = 0; \ + _PyAIT(it)->dataptr -= \ + _PyAIT(it)->backstrides[__npy_i]; \ + } \ + } \ + } \ +} while (0) + +#define PyArray_ITER_GOTO(it, destination) do { \ + int __npy_i; \ + _PyAIT(it)->index = 0; \ + _PyAIT(it)->dataptr = PyArray_BYTES(_PyAIT(it)->ao); \ + for (__npy_i = _PyAIT(it)->nd_m1; __npy_i>=0; __npy_i--) { \ + if (destination[__npy_i] < 0) { \ + destination[__npy_i] += \ + _PyAIT(it)->dims_m1[__npy_i]+1; \ + } \ + _PyAIT(it)->dataptr += destination[__npy_i] * \ + _PyAIT(it)->strides[__npy_i]; \ + _PyAIT(it)->coordinates[__npy_i] = \ + destination[__npy_i]; \ + _PyAIT(it)->index += destination[__npy_i] * \ + ( __npy_i==_PyAIT(it)->nd_m1 ? 1 : \ + _PyAIT(it)->dims_m1[__npy_i+1]+1) ; \ + } \ +} while (0) + +#define PyArray_ITER_GOTO1D(it, ind) do { \ + int __npy_i; \ + npy_intp __npy_ind = (npy_intp)(ind); \ + if (__npy_ind < 0) __npy_ind += _PyAIT(it)->size; \ + _PyAIT(it)->index = __npy_ind; \ + if (_PyAIT(it)->nd_m1 == 0) { \ + _PyAIT(it)->dataptr = PyArray_BYTES(_PyAIT(it)->ao) + \ + __npy_ind * _PyAIT(it)->strides[0]; \ + } \ + else if (_PyAIT(it)->contiguous) \ + _PyAIT(it)->dataptr = PyArray_BYTES(_PyAIT(it)->ao) + \ + __npy_ind * PyArray_ITEMSIZE(_PyAIT(it)->ao); \ + else { \ + _PyAIT(it)->dataptr = PyArray_BYTES(_PyAIT(it)->ao); \ + for (__npy_i = 0; __npy_i<=_PyAIT(it)->nd_m1; \ + __npy_i++) { \ + _PyAIT(it)->coordinates[__npy_i] = \ + (__npy_ind / _PyAIT(it)->factors[__npy_i]); \ + _PyAIT(it)->dataptr += \ + (__npy_ind / _PyAIT(it)->factors[__npy_i]) \ + * _PyAIT(it)->strides[__npy_i]; \ + __npy_ind %= _PyAIT(it)->factors[__npy_i]; \ + } \ + } \ +} while (0) + +#define PyArray_ITER_DATA(it) ((void *)(_PyAIT(it)->dataptr)) + +#define PyArray_ITER_NOTDONE(it) (_PyAIT(it)->index < _PyAIT(it)->size) + + +/* + * Any object passed to PyArray_Broadcast must be binary compatible + * with this structure. + */ + +typedef struct { + PyObject_HEAD + int numiter; /* number of iters */ + npy_intp size; /* broadcasted size */ + npy_intp index; /* current index */ + int nd; /* number of dims */ + npy_intp dimensions[NPY_MAXDIMS_LEGACY_ITERS]; /* dimensions */ + /* + * Space for the individual iterators, do not specify size publicly + * to allow changing it more easily. + * One reason is that Cython uses this for checks and only allows + * growing structs (as of Cython 3.0.6). It also allows NPY_MAXARGS + * to be runtime dependent. + */ +#if (defined(NPY_INTERNAL_BUILD) && NPY_INTERNAL_BUILD) + PyArrayIterObject *iters[64]; +#elif defined(__cplusplus) + /* + * C++ doesn't stricly support flexible members and gives compilers + * warnings (pedantic only), so we lie. We can't make it 64 because + * then Cython is unhappy (larger struct at runtime is OK smaller not). + */ + PyArrayIterObject *iters[32]; +#else + PyArrayIterObject *iters[]; +#endif +} PyArrayMultiIterObject; + +#define _PyMIT(m) ((PyArrayMultiIterObject *)(m)) +#define PyArray_MultiIter_RESET(multi) do { \ + int __npy_mi; \ + _PyMIT(multi)->index = 0; \ + for (__npy_mi=0; __npy_mi < _PyMIT(multi)->numiter; __npy_mi++) { \ + PyArray_ITER_RESET(_PyMIT(multi)->iters[__npy_mi]); \ + } \ +} while (0) + +#define PyArray_MultiIter_NEXT(multi) do { \ + int __npy_mi; \ + _PyMIT(multi)->index++; \ + for (__npy_mi=0; __npy_mi < _PyMIT(multi)->numiter; __npy_mi++) { \ + PyArray_ITER_NEXT(_PyMIT(multi)->iters[__npy_mi]); \ + } \ +} while (0) + +#define PyArray_MultiIter_GOTO(multi, dest) do { \ + int __npy_mi; \ + for (__npy_mi=0; __npy_mi < _PyMIT(multi)->numiter; __npy_mi++) { \ + PyArray_ITER_GOTO(_PyMIT(multi)->iters[__npy_mi], dest); \ + } \ + _PyMIT(multi)->index = _PyMIT(multi)->iters[0]->index; \ +} while (0) + +#define PyArray_MultiIter_GOTO1D(multi, ind) do { \ + int __npy_mi; \ + for (__npy_mi=0; __npy_mi < _PyMIT(multi)->numiter; __npy_mi++) { \ + PyArray_ITER_GOTO1D(_PyMIT(multi)->iters[__npy_mi], ind); \ + } \ + _PyMIT(multi)->index = _PyMIT(multi)->iters[0]->index; \ +} while (0) + +#define PyArray_MultiIter_DATA(multi, i) \ + ((void *)(_PyMIT(multi)->iters[i]->dataptr)) + +#define PyArray_MultiIter_NEXTi(multi, i) \ + PyArray_ITER_NEXT(_PyMIT(multi)->iters[i]) + +#define PyArray_MultiIter_NOTDONE(multi) \ + (_PyMIT(multi)->index < _PyMIT(multi)->size) + + +static NPY_INLINE int +PyArray_MultiIter_NUMITER(PyArrayMultiIterObject *multi) +{ + return multi->numiter; +} + + +static NPY_INLINE npy_intp +PyArray_MultiIter_SIZE(PyArrayMultiIterObject *multi) +{ + return multi->size; +} + + +static NPY_INLINE npy_intp +PyArray_MultiIter_INDEX(PyArrayMultiIterObject *multi) +{ + return multi->index; +} + + +static NPY_INLINE int +PyArray_MultiIter_NDIM(PyArrayMultiIterObject *multi) +{ + return multi->nd; +} + + +static NPY_INLINE npy_intp * +PyArray_MultiIter_DIMS(PyArrayMultiIterObject *multi) +{ + return multi->dimensions; +} + + +static NPY_INLINE void ** +PyArray_MultiIter_ITERS(PyArrayMultiIterObject *multi) +{ + return (void**)multi->iters; +} + + +enum { + NPY_NEIGHBORHOOD_ITER_ZERO_PADDING, + NPY_NEIGHBORHOOD_ITER_ONE_PADDING, + NPY_NEIGHBORHOOD_ITER_CONSTANT_PADDING, + NPY_NEIGHBORHOOD_ITER_CIRCULAR_PADDING, + NPY_NEIGHBORHOOD_ITER_MIRROR_PADDING +}; + +typedef struct { + PyObject_HEAD + + /* + * PyArrayIterObject part: keep this in this exact order + */ + int nd_m1; /* number of dimensions - 1 */ + npy_intp index, size; + npy_intp coordinates[NPY_MAXDIMS_LEGACY_ITERS];/* N-dimensional loop */ + npy_intp dims_m1[NPY_MAXDIMS_LEGACY_ITERS]; /* ao->dimensions - 1 */ + npy_intp strides[NPY_MAXDIMS_LEGACY_ITERS]; /* ao->strides or fake */ + npy_intp backstrides[NPY_MAXDIMS_LEGACY_ITERS];/* how far to jump back */ + npy_intp factors[NPY_MAXDIMS_LEGACY_ITERS]; /* shape factors */ + PyArrayObject *ao; + char *dataptr; /* pointer to current item*/ + npy_bool contiguous; + + npy_intp bounds[NPY_MAXDIMS_LEGACY_ITERS][2]; + npy_intp limits[NPY_MAXDIMS_LEGACY_ITERS][2]; + npy_intp limits_sizes[NPY_MAXDIMS_LEGACY_ITERS]; + npy_iter_get_dataptr_t translate; + + /* + * New members + */ + npy_intp nd; + + /* Dimensions is the dimension of the array */ + npy_intp dimensions[NPY_MAXDIMS_LEGACY_ITERS]; + + /* + * Neighborhood points coordinates are computed relatively to the + * point pointed by _internal_iter + */ + PyArrayIterObject* _internal_iter; + /* + * To keep a reference to the representation of the constant value + * for constant padding + */ + char* constant; + + int mode; +} PyArrayNeighborhoodIterObject; + +/* + * Neighborhood iterator API + */ + +/* General: those work for any mode */ +static inline int +PyArrayNeighborhoodIter_Reset(PyArrayNeighborhoodIterObject* iter); +static inline int +PyArrayNeighborhoodIter_Next(PyArrayNeighborhoodIterObject* iter); +#if 0 +static inline int +PyArrayNeighborhoodIter_Next2D(PyArrayNeighborhoodIterObject* iter); +#endif + +/* + * Include inline implementations - functions defined there are not + * considered public API + */ +#define NUMPY_CORE_INCLUDE_NUMPY__NEIGHBORHOOD_IMP_H_ +#include "_neighborhood_iterator_imp.h" +#undef NUMPY_CORE_INCLUDE_NUMPY__NEIGHBORHOOD_IMP_H_ + + + +/* The default array type */ +#define NPY_DEFAULT_TYPE NPY_DOUBLE +/* default integer type defined in npy_2_compat header */ + +/* + * All sorts of useful ways to look into a PyArrayObject. It is recommended + * to use PyArrayObject * objects instead of always casting from PyObject *, + * for improved type checking. + * + * In many cases here the macro versions of the accessors are deprecated, + * but can't be immediately changed to inline functions because the + * preexisting macros accept PyObject * and do automatic casts. Inline + * functions accepting PyArrayObject * provides for some compile-time + * checking of correctness when working with these objects in C. + */ + +#define PyArray_ISONESEGMENT(m) (PyArray_CHKFLAGS(m, NPY_ARRAY_C_CONTIGUOUS) || \ + PyArray_CHKFLAGS(m, NPY_ARRAY_F_CONTIGUOUS)) + +#define PyArray_ISFORTRAN(m) (PyArray_CHKFLAGS(m, NPY_ARRAY_F_CONTIGUOUS) && \ + (!PyArray_CHKFLAGS(m, NPY_ARRAY_C_CONTIGUOUS))) + +#define PyArray_FORTRAN_IF(m) ((PyArray_CHKFLAGS(m, NPY_ARRAY_F_CONTIGUOUS) ? \ + NPY_ARRAY_F_CONTIGUOUS : 0)) + +static inline int +PyArray_NDIM(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->nd; +} + +static inline void * +PyArray_DATA(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->data; +} + +static inline char * +PyArray_BYTES(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->data; +} + +static inline npy_intp * +PyArray_DIMS(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->dimensions; +} + +static inline npy_intp * +PyArray_STRIDES(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->strides; +} + +static inline npy_intp +PyArray_DIM(const PyArrayObject *arr, int idim) +{ + return ((PyArrayObject_fields *)arr)->dimensions[idim]; +} + +static inline npy_intp +PyArray_STRIDE(const PyArrayObject *arr, int istride) +{ + return ((PyArrayObject_fields *)arr)->strides[istride]; +} + +static inline NPY_RETURNS_BORROWED_REF PyObject * +PyArray_BASE(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->base; +} + +static inline NPY_RETURNS_BORROWED_REF PyArray_Descr * +PyArray_DESCR(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->descr; +} + +static inline int +PyArray_FLAGS(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->flags; +} + + +static inline int +PyArray_TYPE(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->descr->type_num; +} + +static inline int +PyArray_CHKFLAGS(const PyArrayObject *arr, int flags) +{ + return (PyArray_FLAGS(arr) & flags) == flags; +} + +static inline PyArray_Descr * +PyArray_DTYPE(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->descr; +} + +static inline npy_intp * +PyArray_SHAPE(const PyArrayObject *arr) +{ + return ((PyArrayObject_fields *)arr)->dimensions; +} + +/* + * Enables the specified array flags. Does no checking, + * assumes you know what you're doing. + */ +static inline void +PyArray_ENABLEFLAGS(PyArrayObject *arr, int flags) +{ + ((PyArrayObject_fields *)arr)->flags |= flags; +} + +/* + * Clears the specified array flags. Does no checking, + * assumes you know what you're doing. + */ +static inline void +PyArray_CLEARFLAGS(PyArrayObject *arr, int flags) +{ + ((PyArrayObject_fields *)arr)->flags &= ~flags; +} + +#if NPY_FEATURE_VERSION >= NPY_1_22_API_VERSION + static inline NPY_RETURNS_BORROWED_REF PyObject * + PyArray_HANDLER(PyArrayObject *arr) + { + return ((PyArrayObject_fields *)arr)->mem_handler; + } +#endif + +#define PyTypeNum_ISBOOL(type) ((type) == NPY_BOOL) + +#define PyTypeNum_ISUNSIGNED(type) (((type) == NPY_UBYTE) || \ + ((type) == NPY_USHORT) || \ + ((type) == NPY_UINT) || \ + ((type) == NPY_ULONG) || \ + ((type) == NPY_ULONGLONG)) + +#define PyTypeNum_ISSIGNED(type) (((type) == NPY_BYTE) || \ + ((type) == NPY_SHORT) || \ + ((type) == NPY_INT) || \ + ((type) == NPY_LONG) || \ + ((type) == NPY_LONGLONG)) + +#define PyTypeNum_ISINTEGER(type) (((type) >= NPY_BYTE) && \ + ((type) <= NPY_ULONGLONG)) + +#define PyTypeNum_ISFLOAT(type) ((((type) >= NPY_FLOAT) && \ + ((type) <= NPY_LONGDOUBLE)) || \ + ((type) == NPY_HALF)) + +#define PyTypeNum_ISNUMBER(type) (((type) <= NPY_CLONGDOUBLE) || \ + ((type) == NPY_HALF)) + +#define PyTypeNum_ISSTRING(type) (((type) == NPY_STRING) || \ + ((type) == NPY_UNICODE)) + +#define PyTypeNum_ISCOMPLEX(type) (((type) >= NPY_CFLOAT) && \ + ((type) <= NPY_CLONGDOUBLE)) + +#define PyTypeNum_ISFLEXIBLE(type) (((type) >=NPY_STRING) && \ + ((type) <=NPY_VOID)) + +#define PyTypeNum_ISDATETIME(type) (((type) >=NPY_DATETIME) && \ + ((type) <=NPY_TIMEDELTA)) + +#define PyTypeNum_ISUSERDEF(type) (((type) >= NPY_USERDEF) && \ + ((type) < NPY_USERDEF+ \ + NPY_NUMUSERTYPES)) + +#define PyTypeNum_ISEXTENDED(type) (PyTypeNum_ISFLEXIBLE(type) || \ + PyTypeNum_ISUSERDEF(type)) + +#define PyTypeNum_ISOBJECT(type) ((type) == NPY_OBJECT) + + +#define PyDataType_ISLEGACY(dtype) ((dtype)->type_num < NPY_VSTRING && ((dtype)->type_num >= 0)) +#define PyDataType_ISBOOL(obj) PyTypeNum_ISBOOL(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISUNSIGNED(obj) PyTypeNum_ISUNSIGNED(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISSIGNED(obj) PyTypeNum_ISSIGNED(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISINTEGER(obj) PyTypeNum_ISINTEGER(((PyArray_Descr*)(obj))->type_num ) +#define PyDataType_ISFLOAT(obj) PyTypeNum_ISFLOAT(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISNUMBER(obj) PyTypeNum_ISNUMBER(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISSTRING(obj) PyTypeNum_ISSTRING(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISCOMPLEX(obj) PyTypeNum_ISCOMPLEX(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISFLEXIBLE(obj) PyTypeNum_ISFLEXIBLE(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISDATETIME(obj) PyTypeNum_ISDATETIME(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISUSERDEF(obj) PyTypeNum_ISUSERDEF(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISEXTENDED(obj) PyTypeNum_ISEXTENDED(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_ISOBJECT(obj) PyTypeNum_ISOBJECT(((PyArray_Descr*)(obj))->type_num) +#define PyDataType_MAKEUNSIZED(dtype) ((dtype)->elsize = 0) +/* + * PyDataType_* FLAGS, FLACHK, REFCHK, HASFIELDS, HASSUBARRAY, UNSIZED, + * SUBARRAY, NAMES, FIELDS, C_METADATA, and METADATA require version specific + * lookup and are defined in npy_2_compat.h. + */ + + +#define PyArray_ISBOOL(obj) PyTypeNum_ISBOOL(PyArray_TYPE(obj)) +#define PyArray_ISUNSIGNED(obj) PyTypeNum_ISUNSIGNED(PyArray_TYPE(obj)) +#define PyArray_ISSIGNED(obj) PyTypeNum_ISSIGNED(PyArray_TYPE(obj)) +#define PyArray_ISINTEGER(obj) PyTypeNum_ISINTEGER(PyArray_TYPE(obj)) +#define PyArray_ISFLOAT(obj) PyTypeNum_ISFLOAT(PyArray_TYPE(obj)) +#define PyArray_ISNUMBER(obj) PyTypeNum_ISNUMBER(PyArray_TYPE(obj)) +#define PyArray_ISSTRING(obj) PyTypeNum_ISSTRING(PyArray_TYPE(obj)) +#define PyArray_ISCOMPLEX(obj) PyTypeNum_ISCOMPLEX(PyArray_TYPE(obj)) +#define PyArray_ISFLEXIBLE(obj) PyTypeNum_ISFLEXIBLE(PyArray_TYPE(obj)) +#define PyArray_ISDATETIME(obj) PyTypeNum_ISDATETIME(PyArray_TYPE(obj)) +#define PyArray_ISUSERDEF(obj) PyTypeNum_ISUSERDEF(PyArray_TYPE(obj)) +#define PyArray_ISEXTENDED(obj) PyTypeNum_ISEXTENDED(PyArray_TYPE(obj)) +#define PyArray_ISOBJECT(obj) PyTypeNum_ISOBJECT(PyArray_TYPE(obj)) +#define PyArray_HASFIELDS(obj) PyDataType_HASFIELDS(PyArray_DESCR(obj)) + + /* + * FIXME: This should check for a flag on the data-type that + * states whether or not it is variable length. Because the + * ISFLEXIBLE check is hard-coded to the built-in data-types. + */ +#define PyArray_ISVARIABLE(obj) PyTypeNum_ISFLEXIBLE(PyArray_TYPE(obj)) + +#define PyArray_SAFEALIGNEDCOPY(obj) (PyArray_ISALIGNED(obj) && !PyArray_ISVARIABLE(obj)) + + +#define NPY_LITTLE '<' +#define NPY_BIG '>' +#define NPY_NATIVE '=' +#define NPY_SWAP 's' +#define NPY_IGNORE '|' + +#if NPY_BYTE_ORDER == NPY_BIG_ENDIAN +#define NPY_NATBYTE NPY_BIG +#define NPY_OPPBYTE NPY_LITTLE +#else +#define NPY_NATBYTE NPY_LITTLE +#define NPY_OPPBYTE NPY_BIG +#endif + +#define PyArray_ISNBO(arg) ((arg) != NPY_OPPBYTE) +#define PyArray_IsNativeByteOrder PyArray_ISNBO +#define PyArray_ISNOTSWAPPED(m) PyArray_ISNBO(PyArray_DESCR(m)->byteorder) +#define PyArray_ISBYTESWAPPED(m) (!PyArray_ISNOTSWAPPED(m)) + +#define PyArray_FLAGSWAP(m, flags) (PyArray_CHKFLAGS(m, flags) && \ + PyArray_ISNOTSWAPPED(m)) + +#define PyArray_ISCARRAY(m) PyArray_FLAGSWAP(m, NPY_ARRAY_CARRAY) +#define PyArray_ISCARRAY_RO(m) PyArray_FLAGSWAP(m, NPY_ARRAY_CARRAY_RO) +#define PyArray_ISFARRAY(m) PyArray_FLAGSWAP(m, NPY_ARRAY_FARRAY) +#define PyArray_ISFARRAY_RO(m) PyArray_FLAGSWAP(m, NPY_ARRAY_FARRAY_RO) +#define PyArray_ISBEHAVED(m) PyArray_FLAGSWAP(m, NPY_ARRAY_BEHAVED) +#define PyArray_ISBEHAVED_RO(m) PyArray_FLAGSWAP(m, NPY_ARRAY_ALIGNED) + + +#define PyDataType_ISNOTSWAPPED(d) PyArray_ISNBO(((PyArray_Descr *)(d))->byteorder) +#define PyDataType_ISBYTESWAPPED(d) (!PyDataType_ISNOTSWAPPED(d)) + +/************************************************************ + * A struct used by PyArray_CreateSortedStridePerm, new in 1.7. + ************************************************************/ + +typedef struct { + npy_intp perm, stride; +} npy_stride_sort_item; + +/************************************************************ + * This is the form of the struct that's stored in the + * PyCapsule returned by an array's __array_struct__ attribute. See + * https://docs.scipy.org/doc/numpy/reference/arrays.interface.html for the full + * documentation. + ************************************************************/ +typedef struct { + int two; /* + * contains the integer 2 as a sanity + * check + */ + + int nd; /* number of dimensions */ + + char typekind; /* + * kind in array --- character code of + * typestr + */ + + int itemsize; /* size of each element */ + + int flags; /* + * how should be data interpreted. Valid + * flags are CONTIGUOUS (1), F_CONTIGUOUS (2), + * ALIGNED (0x100), NOTSWAPPED (0x200), and + * WRITEABLE (0x400). ARR_HAS_DESCR (0x800) + * states that arrdescr field is present in + * structure + */ + + npy_intp *shape; /* + * A length-nd array of shape + * information + */ + + npy_intp *strides; /* A length-nd array of stride information */ + + void *data; /* A pointer to the first element of the array */ + + PyObject *descr; /* + * A list of fields or NULL (ignored if flags + * does not have ARR_HAS_DESCR flag set) + */ +} PyArrayInterface; + + +/**************************************** + * NpyString + * + * Types used by the NpyString API. + ****************************************/ + +/* + * A "packed" encoded string. The string data must be accessed by first unpacking the string. + */ +typedef struct npy_packed_static_string npy_packed_static_string; + +/* + * An unpacked read-only view onto the data in a packed string + */ +typedef struct npy_unpacked_static_string { + size_t size; + const char *buf; +} npy_static_string; + +/* + * Handles heap allocations for static strings. + */ +typedef struct npy_string_allocator npy_string_allocator; + +typedef struct { + PyArray_Descr base; + // The object representing a null value + PyObject *na_object; + // Flag indicating whether or not to coerce arbitrary objects to strings + char coerce; + // Flag indicating the na object is NaN-like + char has_nan_na; + // Flag indicating the na object is a string + char has_string_na; + // If nonzero, indicates that this instance is owned by an array already + char array_owned; + // The string data to use when a default string is needed + npy_static_string default_string; + // The name of the missing data object, if any + npy_static_string na_name; + // the allocator should only be directly accessed after + // acquiring the allocator_lock and the lock should + // be released immediately after the allocator is + // no longer needed + npy_string_allocator *allocator; +} PyArray_StringDTypeObject; + +/* + * PyArray_DTypeMeta related definitions. + * + * As of now, this API is preliminary and will be extended as necessary. + */ +#if defined(NPY_INTERNAL_BUILD) && NPY_INTERNAL_BUILD + /* + * The Structures defined in this block are currently considered + * private API and may change without warning! + * Part of this (at least the size) is expected to be public API without + * further modifications. + */ + /* TODO: Make this definition public in the API, as soon as its settled */ + NPY_NO_EXPORT extern PyTypeObject PyArrayDTypeMeta_Type; + + /* + * While NumPy DTypes would not need to be heap types the plan is to + * make DTypes available in Python at which point they will be heap types. + * Since we also wish to add fields to the DType class, this looks like + * a typical instance definition, but with PyHeapTypeObject instead of + * only the PyObject_HEAD. + * This must only be exposed very extremely careful consideration, since + * it is a fairly complex construct which may be better to allow + * refactoring of. + */ + typedef struct { + PyHeapTypeObject super; + + /* + * Most DTypes will have a singleton default instance, for the + * parametric legacy DTypes (bytes, string, void, datetime) this + * may be a pointer to the *prototype* instance? + */ + PyArray_Descr *singleton; + /* Copy of the legacy DTypes type number, usually invalid. */ + int type_num; + + /* The type object of the scalar instances (may be NULL?) */ + PyTypeObject *scalar_type; + /* + * DType flags to signal legacy, parametric, or + * abstract. But plenty of space for additional information/flags. + */ + npy_uint64 flags; + + /* + * Use indirection in order to allow a fixed size for this struct. + * A stable ABI size makes creating a static DType less painful + * while also ensuring flexibility for all opaque API (with one + * indirection due the pointer lookup). + */ + void *dt_slots; + void *reserved[3]; + } PyArray_DTypeMeta; + +#endif /* NPY_INTERNAL_BUILD */ + + +/* + * Use the keyword NPY_DEPRECATED_INCLUDES to ensure that the header files + * npy_*_*_deprecated_api.h are only included from here and nowhere else. + */ +#ifdef NPY_DEPRECATED_INCLUDES +#error "Do not use the reserved keyword NPY_DEPRECATED_INCLUDES." +#endif +#define NPY_DEPRECATED_INCLUDES +#if !defined(NPY_NO_DEPRECATED_API) || \ + (NPY_NO_DEPRECATED_API < NPY_1_7_API_VERSION) +#include "npy_1_7_deprecated_api.h" +#endif +/* + * There is no file npy_1_8_deprecated_api.h since there are no additional + * deprecated API features in NumPy 1.8. + * + * Note to maintainers: insert code like the following in future NumPy + * versions. + * + * #if !defined(NPY_NO_DEPRECATED_API) || \ + * (NPY_NO_DEPRECATED_API < NPY_1_9_API_VERSION) + * #include "npy_1_9_deprecated_api.h" + * #endif + */ +#undef NPY_DEPRECATED_INCLUDES + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NDARRAYTYPES_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h new file mode 100644 index 0000000000000000000000000000000000000000..be53cded488dd373072ab798fd7c25a5041e20ad --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_1_7_deprecated_api.h @@ -0,0 +1,112 @@ +#ifndef NPY_DEPRECATED_INCLUDES +#error "Should never include npy_*_*_deprecated_api directly." +#endif + +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_1_7_DEPRECATED_API_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_1_7_DEPRECATED_API_H_ + +/* Emit a warning if the user did not specifically request the old API */ +#ifndef NPY_NO_DEPRECATED_API +#if defined(_WIN32) +#define _WARN___STR2__(x) #x +#define _WARN___STR1__(x) _WARN___STR2__(x) +#define _WARN___LOC__ __FILE__ "(" _WARN___STR1__(__LINE__) ") : Warning Msg: " +#pragma message(_WARN___LOC__"Using deprecated NumPy API, disable it with " \ + "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION") +#else +#warning "Using deprecated NumPy API, disable it with " \ + "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" +#endif +#endif + +/* + * This header exists to collect all dangerous/deprecated NumPy API + * as of NumPy 1.7. + * + * This is an attempt to remove bad API, the proliferation of macros, + * and namespace pollution currently produced by the NumPy headers. + */ + +/* These array flags are deprecated as of NumPy 1.7 */ +#define NPY_CONTIGUOUS NPY_ARRAY_C_CONTIGUOUS +#define NPY_FORTRAN NPY_ARRAY_F_CONTIGUOUS + +/* + * The consistent NPY_ARRAY_* names which don't pollute the NPY_* + * namespace were added in NumPy 1.7. + * + * These versions of the carray flags are deprecated, but + * probably should only be removed after two releases instead of one. + */ +#define NPY_C_CONTIGUOUS NPY_ARRAY_C_CONTIGUOUS +#define NPY_F_CONTIGUOUS NPY_ARRAY_F_CONTIGUOUS +#define NPY_OWNDATA NPY_ARRAY_OWNDATA +#define NPY_FORCECAST NPY_ARRAY_FORCECAST +#define NPY_ENSURECOPY NPY_ARRAY_ENSURECOPY +#define NPY_ENSUREARRAY NPY_ARRAY_ENSUREARRAY +#define NPY_ELEMENTSTRIDES NPY_ARRAY_ELEMENTSTRIDES +#define NPY_ALIGNED NPY_ARRAY_ALIGNED +#define NPY_NOTSWAPPED NPY_ARRAY_NOTSWAPPED +#define NPY_WRITEABLE NPY_ARRAY_WRITEABLE +#define NPY_BEHAVED NPY_ARRAY_BEHAVED +#define NPY_BEHAVED_NS NPY_ARRAY_BEHAVED_NS +#define NPY_CARRAY NPY_ARRAY_CARRAY +#define NPY_CARRAY_RO NPY_ARRAY_CARRAY_RO +#define NPY_FARRAY NPY_ARRAY_FARRAY +#define NPY_FARRAY_RO NPY_ARRAY_FARRAY_RO +#define NPY_DEFAULT NPY_ARRAY_DEFAULT +#define NPY_IN_ARRAY NPY_ARRAY_IN_ARRAY +#define NPY_OUT_ARRAY NPY_ARRAY_OUT_ARRAY +#define NPY_INOUT_ARRAY NPY_ARRAY_INOUT_ARRAY +#define NPY_IN_FARRAY NPY_ARRAY_IN_FARRAY +#define NPY_OUT_FARRAY NPY_ARRAY_OUT_FARRAY +#define NPY_INOUT_FARRAY NPY_ARRAY_INOUT_FARRAY +#define NPY_UPDATE_ALL NPY_ARRAY_UPDATE_ALL + +/* This way of accessing the default type is deprecated as of NumPy 1.7 */ +#define PyArray_DEFAULT NPY_DEFAULT_TYPE + +/* + * Deprecated as of NumPy 1.7, this kind of shortcut doesn't + * belong in the public API. + */ +#define NPY_AO PyArrayObject + +/* + * Deprecated as of NumPy 1.7, an all-lowercase macro doesn't + * belong in the public API. + */ +#define fortran fortran_ + +/* + * Deprecated as of NumPy 1.7, as it is a namespace-polluting + * macro. + */ +#define FORTRAN_IF PyArray_FORTRAN_IF + +/* Deprecated as of NumPy 1.7, datetime64 uses c_metadata instead */ +#define NPY_METADATA_DTSTR "__timeunit__" + +/* + * Deprecated as of NumPy 1.7. + * The reasoning: + * - These are for datetime, but there's no datetime "namespace". + * - They just turn NPY_STR_ into "", which is just + * making something simple be indirected. + */ +#define NPY_STR_Y "Y" +#define NPY_STR_M "M" +#define NPY_STR_W "W" +#define NPY_STR_D "D" +#define NPY_STR_h "h" +#define NPY_STR_m "m" +#define NPY_STR_s "s" +#define NPY_STR_ms "ms" +#define NPY_STR_us "us" +#define NPY_STR_ns "ns" +#define NPY_STR_ps "ps" +#define NPY_STR_fs "fs" +#define NPY_STR_as "as" + + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NPY_1_7_DEPRECATED_API_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_2_compat.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_2_compat.h new file mode 100644 index 0000000000000000000000000000000000000000..2f1555397faf1fa48cf6c9d34c14ebd91e783602 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_2_compat.h @@ -0,0 +1,249 @@ +/* + * This header file defines relevant features which: + * - Require runtime inspection depending on the NumPy version. + * - May be needed when compiling with an older version of NumPy to allow + * a smooth transition. + * + * As such, it is shipped with NumPy 2.0, but designed to be vendored in full + * or parts by downstream projects. + * + * It must be included after any other includes. `import_array()` must have + * been called in the scope or version dependency will misbehave, even when + * only `PyUFunc_` API is used. + * + * If required complicated defs (with inline functions) should be written as: + * + * #if NPY_FEATURE_VERSION >= NPY_2_0_API_VERSION + * Simple definition when NumPy 2.0 API is guaranteed. + * #else + * static inline definition of a 1.x compatibility shim + * #if NPY_ABI_VERSION < 0x02000000 + * Make 1.x compatibility shim the public API (1.x only branch) + * #else + * Runtime dispatched version (1.x or 2.x) + * #endif + * #endif + * + * An internal build always passes NPY_FEATURE_VERSION >= NPY_2_0_API_VERSION + */ + +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_2_COMPAT_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_2_COMPAT_H_ + +/* + * New macros for accessing real and complex part of a complex number can be + * found in "npy_2_complexcompat.h". + */ + + +/* + * This header is meant to be included by downstream directly for 1.x compat. + * In that case we need to ensure that users first included the full headers + * and not just `ndarraytypes.h`. + */ + +#ifndef NPY_FEATURE_VERSION + #error "The NumPy 2 compat header requires `import_array()` for which " \ + "the `ndarraytypes.h` header include is not sufficient. Please " \ + "include it after `numpy/ndarrayobject.h` or similar.\n" \ + "To simplify inclusion, you may use `PyArray_ImportNumPy()` " \ + "which is defined in the compat header and is lightweight (can be)." +#endif + +#if NPY_ABI_VERSION < 0x02000000 + /* + * Define 2.0 feature version as it is needed below to decide whether we + * compile for both 1.x and 2.x (defining it gaurantees 1.x only). + */ + #define NPY_2_0_API_VERSION 0x00000012 + /* + * If we are compiling with NumPy 1.x, PyArray_RUNTIME_VERSION so we + * pretend the `PyArray_RUNTIME_VERSION` is `NPY_FEATURE_VERSION`. + * This allows downstream to use `PyArray_RUNTIME_VERSION` if they need to. + */ + #define PyArray_RUNTIME_VERSION NPY_FEATURE_VERSION + /* Compiling on NumPy 1.x where these are the same: */ + #define PyArray_DescrProto PyArray_Descr +#endif + + +/* + * Define a better way to call `_import_array()` to simplify backporting as + * we now require imports more often (necessary to make ABI flexible). + */ +#ifdef import_array1 + +static inline int +PyArray_ImportNumPyAPI(void) +{ + if (NPY_UNLIKELY(PyArray_API == NULL)) { + import_array1(-1); + } + return 0; +} + +#endif /* import_array1 */ + + +/* + * NPY_DEFAULT_INT + * + * The default integer has changed, `NPY_DEFAULT_INT` is available at runtime + * for use as type number, e.g. `PyArray_DescrFromType(NPY_DEFAULT_INT)`. + * + * NPY_RAVEL_AXIS + * + * This was introduced in NumPy 2.0 to allow indicating that an axis should be + * raveled in an operation. Before NumPy 2.0, NPY_MAXDIMS was used for this purpose. + * + * NPY_MAXDIMS + * + * A constant indicating the maximum number dimensions allowed when creating + * an ndarray. + * + * NPY_NTYPES_LEGACY + * + * The number of built-in NumPy dtypes. + */ +#if NPY_FEATURE_VERSION >= NPY_2_0_API_VERSION + #define NPY_DEFAULT_INT NPY_INTP + #define NPY_RAVEL_AXIS NPY_MIN_INT + #define NPY_MAXARGS 64 + +#elif NPY_ABI_VERSION < 0x02000000 + #define NPY_DEFAULT_INT NPY_LONG + #define NPY_RAVEL_AXIS 32 + #define NPY_MAXARGS 32 + + /* Aliases of 2.x names to 1.x only equivalent names */ + #define NPY_NTYPES NPY_NTYPES_LEGACY + #define PyArray_DescrProto PyArray_Descr + #define _PyArray_LegacyDescr PyArray_Descr + /* NumPy 2 definition always works, but add it for 1.x only */ + #define PyDataType_ISLEGACY(dtype) (1) +#else + #define NPY_DEFAULT_INT \ + (PyArray_RUNTIME_VERSION >= NPY_2_0_API_VERSION ? NPY_INTP : NPY_LONG) + #define NPY_RAVEL_AXIS \ + (PyArray_RUNTIME_VERSION >= NPY_2_0_API_VERSION ? NPY_MIN_INT : 32) + #define NPY_MAXARGS \ + (PyArray_RUNTIME_VERSION >= NPY_2_0_API_VERSION ? 64 : 32) +#endif + + +/* + * Access inline functions for descriptor fields. Except for the first + * few fields, these needed to be moved (elsize, alignment) for + * additional space. Or they are descriptor specific and are not generally + * available anymore (metadata, c_metadata, subarray, names, fields). + * + * Most of these are defined via the `DESCR_ACCESSOR` macro helper. + */ +#if NPY_FEATURE_VERSION >= NPY_2_0_API_VERSION || NPY_ABI_VERSION < 0x02000000 + /* Compiling for 1.x or 2.x only, direct field access is OK: */ + + static inline void + PyDataType_SET_ELSIZE(PyArray_Descr *dtype, npy_intp size) + { + dtype->elsize = size; + } + + static inline npy_uint64 + PyDataType_FLAGS(const PyArray_Descr *dtype) + { + #if NPY_FEATURE_VERSION >= NPY_2_0_API_VERSION + return dtype->flags; + #else + return (unsigned char)dtype->flags; /* Need unsigned cast on 1.x */ + #endif + } + + #define DESCR_ACCESSOR(FIELD, field, type, legacy_only) \ + static inline type \ + PyDataType_##FIELD(const PyArray_Descr *dtype) { \ + if (legacy_only && !PyDataType_ISLEGACY(dtype)) { \ + return (type)0; \ + } \ + return ((_PyArray_LegacyDescr *)dtype)->field; \ + } +#else /* compiling for both 1.x and 2.x */ + + static inline void + PyDataType_SET_ELSIZE(PyArray_Descr *dtype, npy_intp size) + { + if (PyArray_RUNTIME_VERSION >= NPY_2_0_API_VERSION) { + ((_PyArray_DescrNumPy2 *)dtype)->elsize = size; + } + else { + ((PyArray_DescrProto *)dtype)->elsize = (int)size; + } + } + + static inline npy_uint64 + PyDataType_FLAGS(const PyArray_Descr *dtype) + { + if (PyArray_RUNTIME_VERSION >= NPY_2_0_API_VERSION) { + return ((_PyArray_DescrNumPy2 *)dtype)->flags; + } + else { + return (unsigned char)((PyArray_DescrProto *)dtype)->flags; + } + } + + /* Cast to LegacyDescr always fine but needed when `legacy_only` */ + #define DESCR_ACCESSOR(FIELD, field, type, legacy_only) \ + static inline type \ + PyDataType_##FIELD(const PyArray_Descr *dtype) { \ + if (legacy_only && !PyDataType_ISLEGACY(dtype)) { \ + return (type)0; \ + } \ + if (PyArray_RUNTIME_VERSION >= NPY_2_0_API_VERSION) { \ + return ((_PyArray_LegacyDescr *)dtype)->field; \ + } \ + else { \ + return ((PyArray_DescrProto *)dtype)->field; \ + } \ + } +#endif + +DESCR_ACCESSOR(ELSIZE, elsize, npy_intp, 0) +DESCR_ACCESSOR(ALIGNMENT, alignment, npy_intp, 0) +DESCR_ACCESSOR(METADATA, metadata, PyObject *, 1) +DESCR_ACCESSOR(SUBARRAY, subarray, PyArray_ArrayDescr *, 1) +DESCR_ACCESSOR(NAMES, names, PyObject *, 1) +DESCR_ACCESSOR(FIELDS, fields, PyObject *, 1) +DESCR_ACCESSOR(C_METADATA, c_metadata, NpyAuxData *, 1) + +#undef DESCR_ACCESSOR + + +#if !(defined(NPY_INTERNAL_BUILD) && NPY_INTERNAL_BUILD) +#if NPY_FEATURE_VERSION >= NPY_2_0_API_VERSION + static inline PyArray_ArrFuncs * + PyDataType_GetArrFuncs(const PyArray_Descr *descr) + { + return _PyDataType_GetArrFuncs(descr); + } +#elif NPY_ABI_VERSION < 0x02000000 + static inline PyArray_ArrFuncs * + PyDataType_GetArrFuncs(const PyArray_Descr *descr) + { + return descr->f; + } +#else + static inline PyArray_ArrFuncs * + PyDataType_GetArrFuncs(const PyArray_Descr *descr) + { + if (PyArray_RUNTIME_VERSION >= NPY_2_0_API_VERSION) { + return _PyDataType_GetArrFuncs(descr); + } + else { + return ((PyArray_DescrProto *)descr)->f; + } + } +#endif + + +#endif /* not internal build */ + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NPY_2_COMPAT_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_2_complexcompat.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_2_complexcompat.h new file mode 100644 index 0000000000000000000000000000000000000000..0b509011b2803b978bd913191816a9bbd6635d35 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_2_complexcompat.h @@ -0,0 +1,28 @@ +/* This header is designed to be copy-pasted into downstream packages, since it provides + a compatibility layer between the old C struct complex types and the new native C99 + complex types. The new macros are in numpy/npy_math.h, which is why it is included here. */ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_2_COMPLEXCOMPAT_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_2_COMPLEXCOMPAT_H_ + +#include + +#ifndef NPY_CSETREALF +#define NPY_CSETREALF(c, r) (c)->real = (r) +#endif +#ifndef NPY_CSETIMAGF +#define NPY_CSETIMAGF(c, i) (c)->imag = (i) +#endif +#ifndef NPY_CSETREAL +#define NPY_CSETREAL(c, r) (c)->real = (r) +#endif +#ifndef NPY_CSETIMAG +#define NPY_CSETIMAG(c, i) (c)->imag = (i) +#endif +#ifndef NPY_CSETREALL +#define NPY_CSETREALL(c, r) (c)->real = (r) +#endif +#ifndef NPY_CSETIMAGL +#define NPY_CSETIMAGL(c, i) (c)->imag = (i) +#endif + +#endif diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_3kcompat.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_3kcompat.h new file mode 100644 index 0000000000000000000000000000000000000000..62fde943aacc4ad117712182846a94faf69a767b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_3kcompat.h @@ -0,0 +1,595 @@ +/* + * This is a convenience header file providing compatibility utilities + * for supporting different minor versions of Python 3. + * It was originally used to support the transition from Python 2, + * hence the "3k" naming. + * + * If you want to use this for your own projects, it's recommended to make a + * copy of it. Although the stuff below is unlikely to change, we don't provide + * strong backwards compatibility guarantees at the moment. + */ + +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_3KCOMPAT_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_3KCOMPAT_H_ + +#include +#include + +#ifndef NPY_PY3K +#define NPY_PY3K 1 +#endif + +#include "numpy/npy_common.h" +#include "numpy/ndarrayobject.h" + +#ifdef __cplusplus +extern "C" { +#endif + +/* + * PyInt -> PyLong + */ + + +/* + * This is a renamed copy of the Python non-limited API function _PyLong_AsInt. It is + * included here because it is missing from the PyPy API. It completes the PyLong_As* + * group of functions and can be useful in replacing PyInt_Check. + */ +static inline int +Npy__PyLong_AsInt(PyObject *obj) +{ + int overflow; + long result = PyLong_AsLongAndOverflow(obj, &overflow); + + /* INT_MAX and INT_MIN are defined in Python.h */ + if (overflow || result > INT_MAX || result < INT_MIN) { + /* XXX: could be cute and give a different + message for overflow == -1 */ + PyErr_SetString(PyExc_OverflowError, + "Python int too large to convert to C int"); + return -1; + } + return (int)result; +} + + +#if defined(NPY_PY3K) +/* Return True only if the long fits in a C long */ +static inline int PyInt_Check(PyObject *op) { + int overflow = 0; + if (!PyLong_Check(op)) { + return 0; + } + PyLong_AsLongAndOverflow(op, &overflow); + return (overflow == 0); +} + + +#define PyInt_FromLong PyLong_FromLong +#define PyInt_AsLong PyLong_AsLong +#define PyInt_AS_LONG PyLong_AsLong +#define PyInt_AsSsize_t PyLong_AsSsize_t +#define PyNumber_Int PyNumber_Long + +/* NOTE: + * + * Since the PyLong type is very different from the fixed-range PyInt, + * we don't define PyInt_Type -> PyLong_Type. + */ +#endif /* NPY_PY3K */ + +/* Py3 changes PySlice_GetIndicesEx' first argument's type to PyObject* */ +#ifdef NPY_PY3K +# define NpySlice_GetIndicesEx PySlice_GetIndicesEx +#else +# define NpySlice_GetIndicesEx(op, nop, start, end, step, slicelength) \ + PySlice_GetIndicesEx((PySliceObject *)op, nop, start, end, step, slicelength) +#endif + +#if PY_VERSION_HEX < 0x030900a4 + /* Introduced in https://github.com/python/cpython/commit/d2ec81a8c99796b51fb8c49b77a7fe369863226f */ + #define Py_SET_TYPE(obj, type) ((Py_TYPE(obj) = (type)), (void)0) + /* Introduced in https://github.com/python/cpython/commit/b10dc3e7a11fcdb97e285882eba6da92594f90f9 */ + #define Py_SET_SIZE(obj, size) ((Py_SIZE(obj) = (size)), (void)0) + /* Introduced in https://github.com/python/cpython/commit/c86a11221df7e37da389f9c6ce6e47ea22dc44ff */ + #define Py_SET_REFCNT(obj, refcnt) ((Py_REFCNT(obj) = (refcnt)), (void)0) +#endif + + +#define Npy_EnterRecursiveCall(x) Py_EnterRecursiveCall(x) + +/* + * PyString -> PyBytes + */ + +#if defined(NPY_PY3K) + +#define PyString_Type PyBytes_Type +#define PyString_Check PyBytes_Check +#define PyStringObject PyBytesObject +#define PyString_FromString PyBytes_FromString +#define PyString_FromStringAndSize PyBytes_FromStringAndSize +#define PyString_AS_STRING PyBytes_AS_STRING +#define PyString_AsStringAndSize PyBytes_AsStringAndSize +#define PyString_FromFormat PyBytes_FromFormat +#define PyString_Concat PyBytes_Concat +#define PyString_ConcatAndDel PyBytes_ConcatAndDel +#define PyString_AsString PyBytes_AsString +#define PyString_GET_SIZE PyBytes_GET_SIZE +#define PyString_Size PyBytes_Size + +#define PyUString_Type PyUnicode_Type +#define PyUString_Check PyUnicode_Check +#define PyUStringObject PyUnicodeObject +#define PyUString_FromString PyUnicode_FromString +#define PyUString_FromStringAndSize PyUnicode_FromStringAndSize +#define PyUString_FromFormat PyUnicode_FromFormat +#define PyUString_Concat PyUnicode_Concat2 +#define PyUString_ConcatAndDel PyUnicode_ConcatAndDel +#define PyUString_GET_SIZE PyUnicode_GET_SIZE +#define PyUString_Size PyUnicode_Size +#define PyUString_InternFromString PyUnicode_InternFromString +#define PyUString_Format PyUnicode_Format + +#define PyBaseString_Check(obj) (PyUnicode_Check(obj)) + +#else + +#define PyBytes_Type PyString_Type +#define PyBytes_Check PyString_Check +#define PyBytesObject PyStringObject +#define PyBytes_FromString PyString_FromString +#define PyBytes_FromStringAndSize PyString_FromStringAndSize +#define PyBytes_AS_STRING PyString_AS_STRING +#define PyBytes_AsStringAndSize PyString_AsStringAndSize +#define PyBytes_FromFormat PyString_FromFormat +#define PyBytes_Concat PyString_Concat +#define PyBytes_ConcatAndDel PyString_ConcatAndDel +#define PyBytes_AsString PyString_AsString +#define PyBytes_GET_SIZE PyString_GET_SIZE +#define PyBytes_Size PyString_Size + +#define PyUString_Type PyString_Type +#define PyUString_Check PyString_Check +#define PyUStringObject PyStringObject +#define PyUString_FromString PyString_FromString +#define PyUString_FromStringAndSize PyString_FromStringAndSize +#define PyUString_FromFormat PyString_FromFormat +#define PyUString_Concat PyString_Concat +#define PyUString_ConcatAndDel PyString_ConcatAndDel +#define PyUString_GET_SIZE PyString_GET_SIZE +#define PyUString_Size PyString_Size +#define PyUString_InternFromString PyString_InternFromString +#define PyUString_Format PyString_Format + +#define PyBaseString_Check(obj) (PyBytes_Check(obj) || PyUnicode_Check(obj)) + +#endif /* NPY_PY3K */ + +/* + * Macros to protect CRT calls against instant termination when passed an + * invalid parameter (https://bugs.python.org/issue23524). + */ +#if defined _MSC_VER && _MSC_VER >= 1900 + +#include + +extern _invalid_parameter_handler _Py_silent_invalid_parameter_handler; +#define NPY_BEGIN_SUPPRESS_IPH { _invalid_parameter_handler _Py_old_handler = \ + _set_thread_local_invalid_parameter_handler(_Py_silent_invalid_parameter_handler); +#define NPY_END_SUPPRESS_IPH _set_thread_local_invalid_parameter_handler(_Py_old_handler); } + +#else + +#define NPY_BEGIN_SUPPRESS_IPH +#define NPY_END_SUPPRESS_IPH + +#endif /* _MSC_VER >= 1900 */ + + +static inline void +PyUnicode_ConcatAndDel(PyObject **left, PyObject *right) +{ + Py_SETREF(*left, PyUnicode_Concat(*left, right)); + Py_DECREF(right); +} + +static inline void +PyUnicode_Concat2(PyObject **left, PyObject *right) +{ + Py_SETREF(*left, PyUnicode_Concat(*left, right)); +} + +/* + * PyFile_* compatibility + */ + +/* + * Get a FILE* handle to the file represented by the Python object + */ +static inline FILE* +npy_PyFile_Dup2(PyObject *file, char *mode, npy_off_t *orig_pos) +{ + int fd, fd2, unbuf; + Py_ssize_t fd2_tmp; + PyObject *ret, *os, *io, *io_raw; + npy_off_t pos; + FILE *handle; + + /* For Python 2 PyFileObject, use PyFile_AsFile */ +#if !defined(NPY_PY3K) + if (PyFile_Check(file)) { + return PyFile_AsFile(file); + } +#endif + + /* Flush first to ensure things end up in the file in the correct order */ + ret = PyObject_CallMethod(file, "flush", ""); + if (ret == NULL) { + return NULL; + } + Py_DECREF(ret); + fd = PyObject_AsFileDescriptor(file); + if (fd == -1) { + return NULL; + } + + /* + * The handle needs to be dup'd because we have to call fclose + * at the end + */ + os = PyImport_ImportModule("os"); + if (os == NULL) { + return NULL; + } + ret = PyObject_CallMethod(os, "dup", "i", fd); + Py_DECREF(os); + if (ret == NULL) { + return NULL; + } + fd2_tmp = PyNumber_AsSsize_t(ret, PyExc_IOError); + Py_DECREF(ret); + if (fd2_tmp == -1 && PyErr_Occurred()) { + return NULL; + } + if (fd2_tmp < INT_MIN || fd2_tmp > INT_MAX) { + PyErr_SetString(PyExc_IOError, + "Getting an 'int' from os.dup() failed"); + return NULL; + } + fd2 = (int)fd2_tmp; + + /* Convert to FILE* handle */ +#ifdef _WIN32 + NPY_BEGIN_SUPPRESS_IPH + handle = _fdopen(fd2, mode); + NPY_END_SUPPRESS_IPH +#else + handle = fdopen(fd2, mode); +#endif + if (handle == NULL) { + PyErr_SetString(PyExc_IOError, + "Getting a FILE* from a Python file object via " + "_fdopen failed. If you built NumPy, you probably " + "linked with the wrong debug/release runtime"); + return NULL; + } + + /* Record the original raw file handle position */ + *orig_pos = npy_ftell(handle); + if (*orig_pos == -1) { + /* The io module is needed to determine if buffering is used */ + io = PyImport_ImportModule("io"); + if (io == NULL) { + fclose(handle); + return NULL; + } + /* File object instances of RawIOBase are unbuffered */ + io_raw = PyObject_GetAttrString(io, "RawIOBase"); + Py_DECREF(io); + if (io_raw == NULL) { + fclose(handle); + return NULL; + } + unbuf = PyObject_IsInstance(file, io_raw); + Py_DECREF(io_raw); + if (unbuf == 1) { + /* Succeed if the IO is unbuffered */ + return handle; + } + else { + PyErr_SetString(PyExc_IOError, "obtaining file position failed"); + fclose(handle); + return NULL; + } + } + + /* Seek raw handle to the Python-side position */ + ret = PyObject_CallMethod(file, "tell", ""); + if (ret == NULL) { + fclose(handle); + return NULL; + } + pos = PyLong_AsLongLong(ret); + Py_DECREF(ret); + if (PyErr_Occurred()) { + fclose(handle); + return NULL; + } + if (npy_fseek(handle, pos, SEEK_SET) == -1) { + PyErr_SetString(PyExc_IOError, "seeking file failed"); + fclose(handle); + return NULL; + } + return handle; +} + +/* + * Close the dup-ed file handle, and seek the Python one to the current position + */ +static inline int +npy_PyFile_DupClose2(PyObject *file, FILE* handle, npy_off_t orig_pos) +{ + int fd, unbuf; + PyObject *ret, *io, *io_raw; + npy_off_t position; + + /* For Python 2 PyFileObject, do nothing */ +#if !defined(NPY_PY3K) + if (PyFile_Check(file)) { + return 0; + } +#endif + + position = npy_ftell(handle); + + /* Close the FILE* handle */ + fclose(handle); + + /* + * Restore original file handle position, in order to not confuse + * Python-side data structures + */ + fd = PyObject_AsFileDescriptor(file); + if (fd == -1) { + return -1; + } + + if (npy_lseek(fd, orig_pos, SEEK_SET) == -1) { + + /* The io module is needed to determine if buffering is used */ + io = PyImport_ImportModule("io"); + if (io == NULL) { + return -1; + } + /* File object instances of RawIOBase are unbuffered */ + io_raw = PyObject_GetAttrString(io, "RawIOBase"); + Py_DECREF(io); + if (io_raw == NULL) { + return -1; + } + unbuf = PyObject_IsInstance(file, io_raw); + Py_DECREF(io_raw); + if (unbuf == 1) { + /* Succeed if the IO is unbuffered */ + return 0; + } + else { + PyErr_SetString(PyExc_IOError, "seeking file failed"); + return -1; + } + } + + if (position == -1) { + PyErr_SetString(PyExc_IOError, "obtaining file position failed"); + return -1; + } + + /* Seek Python-side handle to the FILE* handle position */ + ret = PyObject_CallMethod(file, "seek", NPY_OFF_T_PYFMT "i", position, 0); + if (ret == NULL) { + return -1; + } + Py_DECREF(ret); + return 0; +} + +static inline int +npy_PyFile_Check(PyObject *file) +{ + int fd; + /* For Python 2, check if it is a PyFileObject */ +#if !defined(NPY_PY3K) + if (PyFile_Check(file)) { + return 1; + } +#endif + fd = PyObject_AsFileDescriptor(file); + if (fd == -1) { + PyErr_Clear(); + return 0; + } + return 1; +} + +static inline PyObject* +npy_PyFile_OpenFile(PyObject *filename, const char *mode) +{ + PyObject *open; + open = PyDict_GetItemString(PyEval_GetBuiltins(), "open"); + if (open == NULL) { + return NULL; + } + return PyObject_CallFunction(open, "Os", filename, mode); +} + +static inline int +npy_PyFile_CloseFile(PyObject *file) +{ + PyObject *ret; + + ret = PyObject_CallMethod(file, "close", NULL); + if (ret == NULL) { + return -1; + } + Py_DECREF(ret); + return 0; +} + + +/* This is a copy of _PyErr_ChainExceptions + */ +static inline void +npy_PyErr_ChainExceptions(PyObject *exc, PyObject *val, PyObject *tb) +{ + if (exc == NULL) + return; + + if (PyErr_Occurred()) { + /* only py3 supports this anyway */ + #ifdef NPY_PY3K + PyObject *exc2, *val2, *tb2; + PyErr_Fetch(&exc2, &val2, &tb2); + PyErr_NormalizeException(&exc, &val, &tb); + if (tb != NULL) { + PyException_SetTraceback(val, tb); + Py_DECREF(tb); + } + Py_DECREF(exc); + PyErr_NormalizeException(&exc2, &val2, &tb2); + PyException_SetContext(val2, val); + PyErr_Restore(exc2, val2, tb2); + #endif + } + else { + PyErr_Restore(exc, val, tb); + } +} + + +/* This is a copy of _PyErr_ChainExceptions, with: + * - a minimal implementation for python 2 + * - __cause__ used instead of __context__ + */ +static inline void +npy_PyErr_ChainExceptionsCause(PyObject *exc, PyObject *val, PyObject *tb) +{ + if (exc == NULL) + return; + + if (PyErr_Occurred()) { + /* only py3 supports this anyway */ + #ifdef NPY_PY3K + PyObject *exc2, *val2, *tb2; + PyErr_Fetch(&exc2, &val2, &tb2); + PyErr_NormalizeException(&exc, &val, &tb); + if (tb != NULL) { + PyException_SetTraceback(val, tb); + Py_DECREF(tb); + } + Py_DECREF(exc); + PyErr_NormalizeException(&exc2, &val2, &tb2); + PyException_SetCause(val2, val); + PyErr_Restore(exc2, val2, tb2); + #endif + } + else { + PyErr_Restore(exc, val, tb); + } +} + +/* + * PyObject_Cmp + */ +#if defined(NPY_PY3K) +static inline int +PyObject_Cmp(PyObject *i1, PyObject *i2, int *cmp) +{ + int v; + v = PyObject_RichCompareBool(i1, i2, Py_LT); + if (v == 1) { + *cmp = -1; + return 1; + } + else if (v == -1) { + return -1; + } + + v = PyObject_RichCompareBool(i1, i2, Py_GT); + if (v == 1) { + *cmp = 1; + return 1; + } + else if (v == -1) { + return -1; + } + + v = PyObject_RichCompareBool(i1, i2, Py_EQ); + if (v == 1) { + *cmp = 0; + return 1; + } + else { + *cmp = 0; + return -1; + } +} +#endif + +/* + * PyCObject functions adapted to PyCapsules. + * + * The main job here is to get rid of the improved error handling + * of PyCapsules. It's a shame... + */ +static inline PyObject * +NpyCapsule_FromVoidPtr(void *ptr, void (*dtor)(PyObject *)) +{ + PyObject *ret = PyCapsule_New(ptr, NULL, dtor); + if (ret == NULL) { + PyErr_Clear(); + } + return ret; +} + +static inline PyObject * +NpyCapsule_FromVoidPtrAndDesc(void *ptr, void* context, void (*dtor)(PyObject *)) +{ + PyObject *ret = NpyCapsule_FromVoidPtr(ptr, dtor); + if (ret != NULL && PyCapsule_SetContext(ret, context) != 0) { + PyErr_Clear(); + Py_DECREF(ret); + ret = NULL; + } + return ret; +} + +static inline void * +NpyCapsule_AsVoidPtr(PyObject *obj) +{ + void *ret = PyCapsule_GetPointer(obj, NULL); + if (ret == NULL) { + PyErr_Clear(); + } + return ret; +} + +static inline void * +NpyCapsule_GetDesc(PyObject *obj) +{ + return PyCapsule_GetContext(obj); +} + +static inline int +NpyCapsule_Check(PyObject *ptr) +{ + return PyCapsule_CheckExact(ptr); +} + +#ifdef __cplusplus +} +#endif + + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NPY_3KCOMPAT_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_common.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_common.h new file mode 100644 index 0000000000000000000000000000000000000000..d11bee123286951d4ff822793dadaaceff38f6b4 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_common.h @@ -0,0 +1,1066 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_COMMON_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_COMMON_H_ + +/* need Python.h for npy_intp, npy_uintp */ +#include + +/* numpconfig.h is auto-generated */ +#include "numpyconfig.h" +#ifdef HAVE_NPY_CONFIG_H +#include +#endif + +/* + * using static inline modifiers when defining npy_math functions + * allows the compiler to make optimizations when possible + */ +#ifndef NPY_INLINE_MATH +#if defined(NPY_INTERNAL_BUILD) && NPY_INTERNAL_BUILD + #define NPY_INLINE_MATH 1 +#else + #define NPY_INLINE_MATH 0 +#endif +#endif + +/* + * gcc does not unroll even with -O3 + * use with care, unrolling on modern cpus rarely speeds things up + */ +#ifdef HAVE_ATTRIBUTE_OPTIMIZE_UNROLL_LOOPS +#define NPY_GCC_UNROLL_LOOPS \ + __attribute__((optimize("unroll-loops"))) +#else +#define NPY_GCC_UNROLL_LOOPS +#endif + +/* highest gcc optimization level, enabled autovectorizer */ +#ifdef HAVE_ATTRIBUTE_OPTIMIZE_OPT_3 +#define NPY_GCC_OPT_3 __attribute__((optimize("O3"))) +#else +#define NPY_GCC_OPT_3 +#endif + +/* + * mark an argument (starting from 1) that must not be NULL and is not checked + * DO NOT USE IF FUNCTION CHECKS FOR NULL!! the compiler will remove the check + */ +#ifdef HAVE_ATTRIBUTE_NONNULL +#define NPY_GCC_NONNULL(n) __attribute__((nonnull(n))) +#else +#define NPY_GCC_NONNULL(n) +#endif + +/* + * give a hint to the compiler which branch is more likely or unlikely + * to occur, e.g. rare error cases: + * + * if (NPY_UNLIKELY(failure == 0)) + * return NULL; + * + * the double !! is to cast the expression (e.g. NULL) to a boolean required by + * the intrinsic + */ +#ifdef HAVE___BUILTIN_EXPECT +#define NPY_LIKELY(x) __builtin_expect(!!(x), 1) +#define NPY_UNLIKELY(x) __builtin_expect(!!(x), 0) +#else +#define NPY_LIKELY(x) (x) +#define NPY_UNLIKELY(x) (x) +#endif + +#ifdef HAVE___BUILTIN_PREFETCH +/* unlike _mm_prefetch also works on non-x86 */ +#define NPY_PREFETCH(x, rw, loc) __builtin_prefetch((x), (rw), (loc)) +#else +#ifdef NPY_HAVE_SSE +/* _MM_HINT_ET[01] (rw = 1) unsupported, only available in gcc >= 4.9 */ +#define NPY_PREFETCH(x, rw, loc) _mm_prefetch((x), loc == 0 ? _MM_HINT_NTA : \ + (loc == 1 ? _MM_HINT_T2 : \ + (loc == 2 ? _MM_HINT_T1 : \ + (loc == 3 ? _MM_HINT_T0 : -1)))) +#else +#define NPY_PREFETCH(x, rw,loc) +#endif +#endif + +/* `NPY_INLINE` kept for backwards compatibility; use `inline` instead */ +#if defined(_MSC_VER) && !defined(__clang__) + #define NPY_INLINE __inline +/* clang included here to handle clang-cl on Windows */ +#elif defined(__GNUC__) || defined(__clang__) + #if defined(__STRICT_ANSI__) + #define NPY_INLINE __inline__ + #else + #define NPY_INLINE inline + #endif +#else + #define NPY_INLINE +#endif + +#ifdef _MSC_VER + #define NPY_FINLINE static __forceinline +#elif defined(__GNUC__) + #define NPY_FINLINE static inline __attribute__((always_inline)) +#else + #define NPY_FINLINE static +#endif + +#if defined(_MSC_VER) + #define NPY_NOINLINE static __declspec(noinline) +#elif defined(__GNUC__) || defined(__clang__) + #define NPY_NOINLINE static __attribute__((noinline)) +#else + #define NPY_NOINLINE static +#endif + +#ifdef HAVE___THREAD + #define NPY_TLS __thread +#else + #ifdef HAVE___DECLSPEC_THREAD_ + #define NPY_TLS __declspec(thread) + #else + #define NPY_TLS + #endif +#endif + +#ifdef WITH_CPYCHECKER_RETURNS_BORROWED_REF_ATTRIBUTE + #define NPY_RETURNS_BORROWED_REF \ + __attribute__((cpychecker_returns_borrowed_ref)) +#else + #define NPY_RETURNS_BORROWED_REF +#endif + +#ifdef WITH_CPYCHECKER_STEALS_REFERENCE_TO_ARG_ATTRIBUTE + #define NPY_STEALS_REF_TO_ARG(n) \ + __attribute__((cpychecker_steals_reference_to_arg(n))) +#else + #define NPY_STEALS_REF_TO_ARG(n) +#endif + +/* 64 bit file position support, also on win-amd64. Issue gh-2256 */ +#if defined(_MSC_VER) && defined(_WIN64) && (_MSC_VER > 1400) || \ + defined(__MINGW32__) || defined(__MINGW64__) + #include + + #define npy_fseek _fseeki64 + #define npy_ftell _ftelli64 + #define npy_lseek _lseeki64 + #define npy_off_t npy_int64 + + #if NPY_SIZEOF_INT == 8 + #define NPY_OFF_T_PYFMT "i" + #elif NPY_SIZEOF_LONG == 8 + #define NPY_OFF_T_PYFMT "l" + #elif NPY_SIZEOF_LONGLONG == 8 + #define NPY_OFF_T_PYFMT "L" + #else + #error Unsupported size for type off_t + #endif +#else +#ifdef HAVE_FSEEKO + #define npy_fseek fseeko +#else + #define npy_fseek fseek +#endif +#ifdef HAVE_FTELLO + #define npy_ftell ftello +#else + #define npy_ftell ftell +#endif + #include + #ifndef _WIN32 + #include + #endif + #define npy_lseek lseek + #define npy_off_t off_t + + #if NPY_SIZEOF_OFF_T == NPY_SIZEOF_SHORT + #define NPY_OFF_T_PYFMT "h" + #elif NPY_SIZEOF_OFF_T == NPY_SIZEOF_INT + #define NPY_OFF_T_PYFMT "i" + #elif NPY_SIZEOF_OFF_T == NPY_SIZEOF_LONG + #define NPY_OFF_T_PYFMT "l" + #elif NPY_SIZEOF_OFF_T == NPY_SIZEOF_LONGLONG + #define NPY_OFF_T_PYFMT "L" + #else + #error Unsupported size for type off_t + #endif +#endif + +/* enums for detected endianness */ +enum { + NPY_CPU_UNKNOWN_ENDIAN, + NPY_CPU_LITTLE, + NPY_CPU_BIG +}; + +/* + * This is to typedef npy_intp to the appropriate size for Py_ssize_t. + * (Before NumPy 2.0 we used Py_intptr_t and Py_uintptr_t from `pyport.h`.) + */ +typedef Py_ssize_t npy_intp; +typedef size_t npy_uintp; + +/* + * Define sizes that were not defined in numpyconfig.h. + */ +#define NPY_SIZEOF_CHAR 1 +#define NPY_SIZEOF_BYTE 1 +#define NPY_SIZEOF_DATETIME 8 +#define NPY_SIZEOF_TIMEDELTA 8 +#define NPY_SIZEOF_HALF 2 +#define NPY_SIZEOF_CFLOAT NPY_SIZEOF_COMPLEX_FLOAT +#define NPY_SIZEOF_CDOUBLE NPY_SIZEOF_COMPLEX_DOUBLE +#define NPY_SIZEOF_CLONGDOUBLE NPY_SIZEOF_COMPLEX_LONGDOUBLE + +#ifdef constchar +#undef constchar +#endif + +#define NPY_SSIZE_T_PYFMT "n" +#define constchar char + +/* NPY_INTP_FMT Note: + * Unlike the other NPY_*_FMT macros, which are used with PyOS_snprintf, + * NPY_INTP_FMT is used with PyErr_Format and PyUnicode_FromFormat. Those + * functions use different formatting codes that are portably specified + * according to the Python documentation. See issue gh-2388. + */ +#if NPY_SIZEOF_INTP == NPY_SIZEOF_LONG + #define NPY_INTP NPY_LONG + #define NPY_UINTP NPY_ULONG + #define PyIntpArrType_Type PyLongArrType_Type + #define PyUIntpArrType_Type PyULongArrType_Type + #define NPY_MAX_INTP NPY_MAX_LONG + #define NPY_MIN_INTP NPY_MIN_LONG + #define NPY_MAX_UINTP NPY_MAX_ULONG + #define NPY_INTP_FMT "ld" +#elif NPY_SIZEOF_INTP == NPY_SIZEOF_INT + #define NPY_INTP NPY_INT + #define NPY_UINTP NPY_UINT + #define PyIntpArrType_Type PyIntArrType_Type + #define PyUIntpArrType_Type PyUIntArrType_Type + #define NPY_MAX_INTP NPY_MAX_INT + #define NPY_MIN_INTP NPY_MIN_INT + #define NPY_MAX_UINTP NPY_MAX_UINT + #define NPY_INTP_FMT "d" +#elif defined(PY_LONG_LONG) && (NPY_SIZEOF_INTP == NPY_SIZEOF_LONGLONG) + #define NPY_INTP NPY_LONGLONG + #define NPY_UINTP NPY_ULONGLONG + #define PyIntpArrType_Type PyLongLongArrType_Type + #define PyUIntpArrType_Type PyULongLongArrType_Type + #define NPY_MAX_INTP NPY_MAX_LONGLONG + #define NPY_MIN_INTP NPY_MIN_LONGLONG + #define NPY_MAX_UINTP NPY_MAX_ULONGLONG + #define NPY_INTP_FMT "lld" +#else + #error "Failed to correctly define NPY_INTP and NPY_UINTP" +#endif + + +/* + * Some platforms don't define bool, long long, or long double. + * Handle that here. + */ +#define NPY_BYTE_FMT "hhd" +#define NPY_UBYTE_FMT "hhu" +#define NPY_SHORT_FMT "hd" +#define NPY_USHORT_FMT "hu" +#define NPY_INT_FMT "d" +#define NPY_UINT_FMT "u" +#define NPY_LONG_FMT "ld" +#define NPY_ULONG_FMT "lu" +#define NPY_HALF_FMT "g" +#define NPY_FLOAT_FMT "g" +#define NPY_DOUBLE_FMT "g" + + +#ifdef PY_LONG_LONG +typedef PY_LONG_LONG npy_longlong; +typedef unsigned PY_LONG_LONG npy_ulonglong; +# ifdef _MSC_VER +# define NPY_LONGLONG_FMT "I64d" +# define NPY_ULONGLONG_FMT "I64u" +# else +# define NPY_LONGLONG_FMT "lld" +# define NPY_ULONGLONG_FMT "llu" +# endif +# ifdef _MSC_VER +# define NPY_LONGLONG_SUFFIX(x) (x##i64) +# define NPY_ULONGLONG_SUFFIX(x) (x##Ui64) +# else +# define NPY_LONGLONG_SUFFIX(x) (x##LL) +# define NPY_ULONGLONG_SUFFIX(x) (x##ULL) +# endif +#else +typedef long npy_longlong; +typedef unsigned long npy_ulonglong; +# define NPY_LONGLONG_SUFFIX(x) (x##L) +# define NPY_ULONGLONG_SUFFIX(x) (x##UL) +#endif + + +typedef unsigned char npy_bool; +#define NPY_FALSE 0 +#define NPY_TRUE 1 +/* + * `NPY_SIZEOF_LONGDOUBLE` isn't usually equal to sizeof(long double). + * In some certain cases, it may forced to be equal to sizeof(double) + * even against the compiler implementation and the same goes for + * `complex long double`. + * + * Therefore, avoid `long double`, use `npy_longdouble` instead, + * and when it comes to standard math functions make sure of using + * the double version when `NPY_SIZEOF_LONGDOUBLE` == `NPY_SIZEOF_DOUBLE`. + * For example: + * npy_longdouble *ptr, x; + * #if NPY_SIZEOF_LONGDOUBLE == NPY_SIZEOF_DOUBLE + * npy_longdouble r = modf(x, ptr); + * #else + * npy_longdouble r = modfl(x, ptr); + * #endif + * + * See https://github.com/numpy/numpy/issues/20348 + */ +#if NPY_SIZEOF_LONGDOUBLE == NPY_SIZEOF_DOUBLE + #define NPY_LONGDOUBLE_FMT "g" + #define longdouble_t double + typedef double npy_longdouble; +#else + #define NPY_LONGDOUBLE_FMT "Lg" + #define longdouble_t long double + typedef long double npy_longdouble; +#endif + +#ifndef Py_USING_UNICODE +#error Must use Python with unicode enabled. +#endif + + +typedef signed char npy_byte; +typedef unsigned char npy_ubyte; +typedef unsigned short npy_ushort; +typedef unsigned int npy_uint; +typedef unsigned long npy_ulong; + +/* These are for completeness */ +typedef char npy_char; +typedef short npy_short; +typedef int npy_int; +typedef long npy_long; +typedef float npy_float; +typedef double npy_double; + +typedef Py_hash_t npy_hash_t; +#define NPY_SIZEOF_HASH_T NPY_SIZEOF_INTP + +#if defined(__cplusplus) + +typedef struct +{ + double _Val[2]; +} npy_cdouble; + +typedef struct +{ + float _Val[2]; +} npy_cfloat; + +typedef struct +{ + long double _Val[2]; +} npy_clongdouble; + +#else + +#include + + +#if defined(_MSC_VER) && !defined(__INTEL_COMPILER) +typedef _Dcomplex npy_cdouble; +typedef _Fcomplex npy_cfloat; +typedef _Lcomplex npy_clongdouble; +#else /* !defined(_MSC_VER) || defined(__INTEL_COMPILER) */ +typedef double _Complex npy_cdouble; +typedef float _Complex npy_cfloat; +typedef longdouble_t _Complex npy_clongdouble; +#endif + +#endif + +/* + * numarray-style bit-width typedefs + */ +#define NPY_MAX_INT8 127 +#define NPY_MIN_INT8 -128 +#define NPY_MAX_UINT8 255 +#define NPY_MAX_INT16 32767 +#define NPY_MIN_INT16 -32768 +#define NPY_MAX_UINT16 65535 +#define NPY_MAX_INT32 2147483647 +#define NPY_MIN_INT32 (-NPY_MAX_INT32 - 1) +#define NPY_MAX_UINT32 4294967295U +#define NPY_MAX_INT64 NPY_LONGLONG_SUFFIX(9223372036854775807) +#define NPY_MIN_INT64 (-NPY_MAX_INT64 - NPY_LONGLONG_SUFFIX(1)) +#define NPY_MAX_UINT64 NPY_ULONGLONG_SUFFIX(18446744073709551615) +#define NPY_MAX_INT128 NPY_LONGLONG_SUFFIX(85070591730234615865843651857942052864) +#define NPY_MIN_INT128 (-NPY_MAX_INT128 - NPY_LONGLONG_SUFFIX(1)) +#define NPY_MAX_UINT128 NPY_ULONGLONG_SUFFIX(170141183460469231731687303715884105728) +#define NPY_MAX_INT256 NPY_LONGLONG_SUFFIX(57896044618658097711785492504343953926634992332820282019728792003956564819967) +#define NPY_MIN_INT256 (-NPY_MAX_INT256 - NPY_LONGLONG_SUFFIX(1)) +#define NPY_MAX_UINT256 NPY_ULONGLONG_SUFFIX(115792089237316195423570985008687907853269984665640564039457584007913129639935) +#define NPY_MIN_DATETIME NPY_MIN_INT64 +#define NPY_MAX_DATETIME NPY_MAX_INT64 +#define NPY_MIN_TIMEDELTA NPY_MIN_INT64 +#define NPY_MAX_TIMEDELTA NPY_MAX_INT64 + + /* Need to find the number of bits for each type and + make definitions accordingly. + + C states that sizeof(char) == 1 by definition + + So, just using the sizeof keyword won't help. + + It also looks like Python itself uses sizeof(char) quite a + bit, which by definition should be 1 all the time. + + Idea: Make Use of CHAR_BIT which should tell us how many + BITS per CHARACTER + */ + + /* Include platform definitions -- These are in the C89/90 standard */ +#include +#define NPY_MAX_BYTE SCHAR_MAX +#define NPY_MIN_BYTE SCHAR_MIN +#define NPY_MAX_UBYTE UCHAR_MAX +#define NPY_MAX_SHORT SHRT_MAX +#define NPY_MIN_SHORT SHRT_MIN +#define NPY_MAX_USHORT USHRT_MAX +#define NPY_MAX_INT INT_MAX +#ifndef INT_MIN +#define INT_MIN (-INT_MAX - 1) +#endif +#define NPY_MIN_INT INT_MIN +#define NPY_MAX_UINT UINT_MAX +#define NPY_MAX_LONG LONG_MAX +#define NPY_MIN_LONG LONG_MIN +#define NPY_MAX_ULONG ULONG_MAX + +#define NPY_BITSOF_BOOL (sizeof(npy_bool) * CHAR_BIT) +#define NPY_BITSOF_CHAR CHAR_BIT +#define NPY_BITSOF_BYTE (NPY_SIZEOF_BYTE * CHAR_BIT) +#define NPY_BITSOF_SHORT (NPY_SIZEOF_SHORT * CHAR_BIT) +#define NPY_BITSOF_INT (NPY_SIZEOF_INT * CHAR_BIT) +#define NPY_BITSOF_LONG (NPY_SIZEOF_LONG * CHAR_BIT) +#define NPY_BITSOF_LONGLONG (NPY_SIZEOF_LONGLONG * CHAR_BIT) +#define NPY_BITSOF_INTP (NPY_SIZEOF_INTP * CHAR_BIT) +#define NPY_BITSOF_HALF (NPY_SIZEOF_HALF * CHAR_BIT) +#define NPY_BITSOF_FLOAT (NPY_SIZEOF_FLOAT * CHAR_BIT) +#define NPY_BITSOF_DOUBLE (NPY_SIZEOF_DOUBLE * CHAR_BIT) +#define NPY_BITSOF_LONGDOUBLE (NPY_SIZEOF_LONGDOUBLE * CHAR_BIT) +#define NPY_BITSOF_CFLOAT (NPY_SIZEOF_CFLOAT * CHAR_BIT) +#define NPY_BITSOF_CDOUBLE (NPY_SIZEOF_CDOUBLE * CHAR_BIT) +#define NPY_BITSOF_CLONGDOUBLE (NPY_SIZEOF_CLONGDOUBLE * CHAR_BIT) +#define NPY_BITSOF_DATETIME (NPY_SIZEOF_DATETIME * CHAR_BIT) +#define NPY_BITSOF_TIMEDELTA (NPY_SIZEOF_TIMEDELTA * CHAR_BIT) + +#if NPY_BITSOF_LONG == 8 +#define NPY_INT8 NPY_LONG +#define NPY_UINT8 NPY_ULONG + typedef long npy_int8; + typedef unsigned long npy_uint8; +#define PyInt8ScalarObject PyLongScalarObject +#define PyInt8ArrType_Type PyLongArrType_Type +#define PyUInt8ScalarObject PyULongScalarObject +#define PyUInt8ArrType_Type PyULongArrType_Type +#define NPY_INT8_FMT NPY_LONG_FMT +#define NPY_UINT8_FMT NPY_ULONG_FMT +#elif NPY_BITSOF_LONG == 16 +#define NPY_INT16 NPY_LONG +#define NPY_UINT16 NPY_ULONG + typedef long npy_int16; + typedef unsigned long npy_uint16; +#define PyInt16ScalarObject PyLongScalarObject +#define PyInt16ArrType_Type PyLongArrType_Type +#define PyUInt16ScalarObject PyULongScalarObject +#define PyUInt16ArrType_Type PyULongArrType_Type +#define NPY_INT16_FMT NPY_LONG_FMT +#define NPY_UINT16_FMT NPY_ULONG_FMT +#elif NPY_BITSOF_LONG == 32 +#define NPY_INT32 NPY_LONG +#define NPY_UINT32 NPY_ULONG + typedef long npy_int32; + typedef unsigned long npy_uint32; + typedef unsigned long npy_ucs4; +#define PyInt32ScalarObject PyLongScalarObject +#define PyInt32ArrType_Type PyLongArrType_Type +#define PyUInt32ScalarObject PyULongScalarObject +#define PyUInt32ArrType_Type PyULongArrType_Type +#define NPY_INT32_FMT NPY_LONG_FMT +#define NPY_UINT32_FMT NPY_ULONG_FMT +#elif NPY_BITSOF_LONG == 64 +#define NPY_INT64 NPY_LONG +#define NPY_UINT64 NPY_ULONG + typedef long npy_int64; + typedef unsigned long npy_uint64; +#define PyInt64ScalarObject PyLongScalarObject +#define PyInt64ArrType_Type PyLongArrType_Type +#define PyUInt64ScalarObject PyULongScalarObject +#define PyUInt64ArrType_Type PyULongArrType_Type +#define NPY_INT64_FMT NPY_LONG_FMT +#define NPY_UINT64_FMT NPY_ULONG_FMT +#define MyPyLong_FromInt64 PyLong_FromLong +#define MyPyLong_AsInt64 PyLong_AsLong +#elif NPY_BITSOF_LONG == 128 +#define NPY_INT128 NPY_LONG +#define NPY_UINT128 NPY_ULONG + typedef long npy_int128; + typedef unsigned long npy_uint128; +#define PyInt128ScalarObject PyLongScalarObject +#define PyInt128ArrType_Type PyLongArrType_Type +#define PyUInt128ScalarObject PyULongScalarObject +#define PyUInt128ArrType_Type PyULongArrType_Type +#define NPY_INT128_FMT NPY_LONG_FMT +#define NPY_UINT128_FMT NPY_ULONG_FMT +#endif + +#if NPY_BITSOF_LONGLONG == 8 +# ifndef NPY_INT8 +# define NPY_INT8 NPY_LONGLONG +# define NPY_UINT8 NPY_ULONGLONG + typedef npy_longlong npy_int8; + typedef npy_ulonglong npy_uint8; +# define PyInt8ScalarObject PyLongLongScalarObject +# define PyInt8ArrType_Type PyLongLongArrType_Type +# define PyUInt8ScalarObject PyULongLongScalarObject +# define PyUInt8ArrType_Type PyULongLongArrType_Type +#define NPY_INT8_FMT NPY_LONGLONG_FMT +#define NPY_UINT8_FMT NPY_ULONGLONG_FMT +# endif +# define NPY_MAX_LONGLONG NPY_MAX_INT8 +# define NPY_MIN_LONGLONG NPY_MIN_INT8 +# define NPY_MAX_ULONGLONG NPY_MAX_UINT8 +#elif NPY_BITSOF_LONGLONG == 16 +# ifndef NPY_INT16 +# define NPY_INT16 NPY_LONGLONG +# define NPY_UINT16 NPY_ULONGLONG + typedef npy_longlong npy_int16; + typedef npy_ulonglong npy_uint16; +# define PyInt16ScalarObject PyLongLongScalarObject +# define PyInt16ArrType_Type PyLongLongArrType_Type +# define PyUInt16ScalarObject PyULongLongScalarObject +# define PyUInt16ArrType_Type PyULongLongArrType_Type +#define NPY_INT16_FMT NPY_LONGLONG_FMT +#define NPY_UINT16_FMT NPY_ULONGLONG_FMT +# endif +# define NPY_MAX_LONGLONG NPY_MAX_INT16 +# define NPY_MIN_LONGLONG NPY_MIN_INT16 +# define NPY_MAX_ULONGLONG NPY_MAX_UINT16 +#elif NPY_BITSOF_LONGLONG == 32 +# ifndef NPY_INT32 +# define NPY_INT32 NPY_LONGLONG +# define NPY_UINT32 NPY_ULONGLONG + typedef npy_longlong npy_int32; + typedef npy_ulonglong npy_uint32; + typedef npy_ulonglong npy_ucs4; +# define PyInt32ScalarObject PyLongLongScalarObject +# define PyInt32ArrType_Type PyLongLongArrType_Type +# define PyUInt32ScalarObject PyULongLongScalarObject +# define PyUInt32ArrType_Type PyULongLongArrType_Type +#define NPY_INT32_FMT NPY_LONGLONG_FMT +#define NPY_UINT32_FMT NPY_ULONGLONG_FMT +# endif +# define NPY_MAX_LONGLONG NPY_MAX_INT32 +# define NPY_MIN_LONGLONG NPY_MIN_INT32 +# define NPY_MAX_ULONGLONG NPY_MAX_UINT32 +#elif NPY_BITSOF_LONGLONG == 64 +# ifndef NPY_INT64 +# define NPY_INT64 NPY_LONGLONG +# define NPY_UINT64 NPY_ULONGLONG + typedef npy_longlong npy_int64; + typedef npy_ulonglong npy_uint64; +# define PyInt64ScalarObject PyLongLongScalarObject +# define PyInt64ArrType_Type PyLongLongArrType_Type +# define PyUInt64ScalarObject PyULongLongScalarObject +# define PyUInt64ArrType_Type PyULongLongArrType_Type +#define NPY_INT64_FMT NPY_LONGLONG_FMT +#define NPY_UINT64_FMT NPY_ULONGLONG_FMT +# define MyPyLong_FromInt64 PyLong_FromLongLong +# define MyPyLong_AsInt64 PyLong_AsLongLong +# endif +# define NPY_MAX_LONGLONG NPY_MAX_INT64 +# define NPY_MIN_LONGLONG NPY_MIN_INT64 +# define NPY_MAX_ULONGLONG NPY_MAX_UINT64 +#elif NPY_BITSOF_LONGLONG == 128 +# ifndef NPY_INT128 +# define NPY_INT128 NPY_LONGLONG +# define NPY_UINT128 NPY_ULONGLONG + typedef npy_longlong npy_int128; + typedef npy_ulonglong npy_uint128; +# define PyInt128ScalarObject PyLongLongScalarObject +# define PyInt128ArrType_Type PyLongLongArrType_Type +# define PyUInt128ScalarObject PyULongLongScalarObject +# define PyUInt128ArrType_Type PyULongLongArrType_Type +#define NPY_INT128_FMT NPY_LONGLONG_FMT +#define NPY_UINT128_FMT NPY_ULONGLONG_FMT +# endif +# define NPY_MAX_LONGLONG NPY_MAX_INT128 +# define NPY_MIN_LONGLONG NPY_MIN_INT128 +# define NPY_MAX_ULONGLONG NPY_MAX_UINT128 +#elif NPY_BITSOF_LONGLONG == 256 +# define NPY_INT256 NPY_LONGLONG +# define NPY_UINT256 NPY_ULONGLONG + typedef npy_longlong npy_int256; + typedef npy_ulonglong npy_uint256; +# define PyInt256ScalarObject PyLongLongScalarObject +# define PyInt256ArrType_Type PyLongLongArrType_Type +# define PyUInt256ScalarObject PyULongLongScalarObject +# define PyUInt256ArrType_Type PyULongLongArrType_Type +#define NPY_INT256_FMT NPY_LONGLONG_FMT +#define NPY_UINT256_FMT NPY_ULONGLONG_FMT +# define NPY_MAX_LONGLONG NPY_MAX_INT256 +# define NPY_MIN_LONGLONG NPY_MIN_INT256 +# define NPY_MAX_ULONGLONG NPY_MAX_UINT256 +#endif + +#if NPY_BITSOF_INT == 8 +#ifndef NPY_INT8 +#define NPY_INT8 NPY_INT +#define NPY_UINT8 NPY_UINT + typedef int npy_int8; + typedef unsigned int npy_uint8; +# define PyInt8ScalarObject PyIntScalarObject +# define PyInt8ArrType_Type PyIntArrType_Type +# define PyUInt8ScalarObject PyUIntScalarObject +# define PyUInt8ArrType_Type PyUIntArrType_Type +#define NPY_INT8_FMT NPY_INT_FMT +#define NPY_UINT8_FMT NPY_UINT_FMT +#endif +#elif NPY_BITSOF_INT == 16 +#ifndef NPY_INT16 +#define NPY_INT16 NPY_INT +#define NPY_UINT16 NPY_UINT + typedef int npy_int16; + typedef unsigned int npy_uint16; +# define PyInt16ScalarObject PyIntScalarObject +# define PyInt16ArrType_Type PyIntArrType_Type +# define PyUInt16ScalarObject PyIntUScalarObject +# define PyUInt16ArrType_Type PyIntUArrType_Type +#define NPY_INT16_FMT NPY_INT_FMT +#define NPY_UINT16_FMT NPY_UINT_FMT +#endif +#elif NPY_BITSOF_INT == 32 +#ifndef NPY_INT32 +#define NPY_INT32 NPY_INT +#define NPY_UINT32 NPY_UINT + typedef int npy_int32; + typedef unsigned int npy_uint32; + typedef unsigned int npy_ucs4; +# define PyInt32ScalarObject PyIntScalarObject +# define PyInt32ArrType_Type PyIntArrType_Type +# define PyUInt32ScalarObject PyUIntScalarObject +# define PyUInt32ArrType_Type PyUIntArrType_Type +#define NPY_INT32_FMT NPY_INT_FMT +#define NPY_UINT32_FMT NPY_UINT_FMT +#endif +#elif NPY_BITSOF_INT == 64 +#ifndef NPY_INT64 +#define NPY_INT64 NPY_INT +#define NPY_UINT64 NPY_UINT + typedef int npy_int64; + typedef unsigned int npy_uint64; +# define PyInt64ScalarObject PyIntScalarObject +# define PyInt64ArrType_Type PyIntArrType_Type +# define PyUInt64ScalarObject PyUIntScalarObject +# define PyUInt64ArrType_Type PyUIntArrType_Type +#define NPY_INT64_FMT NPY_INT_FMT +#define NPY_UINT64_FMT NPY_UINT_FMT +# define MyPyLong_FromInt64 PyLong_FromLong +# define MyPyLong_AsInt64 PyLong_AsLong +#endif +#elif NPY_BITSOF_INT == 128 +#ifndef NPY_INT128 +#define NPY_INT128 NPY_INT +#define NPY_UINT128 NPY_UINT + typedef int npy_int128; + typedef unsigned int npy_uint128; +# define PyInt128ScalarObject PyIntScalarObject +# define PyInt128ArrType_Type PyIntArrType_Type +# define PyUInt128ScalarObject PyUIntScalarObject +# define PyUInt128ArrType_Type PyUIntArrType_Type +#define NPY_INT128_FMT NPY_INT_FMT +#define NPY_UINT128_FMT NPY_UINT_FMT +#endif +#endif + +#if NPY_BITSOF_SHORT == 8 +#ifndef NPY_INT8 +#define NPY_INT8 NPY_SHORT +#define NPY_UINT8 NPY_USHORT + typedef short npy_int8; + typedef unsigned short npy_uint8; +# define PyInt8ScalarObject PyShortScalarObject +# define PyInt8ArrType_Type PyShortArrType_Type +# define PyUInt8ScalarObject PyUShortScalarObject +# define PyUInt8ArrType_Type PyUShortArrType_Type +#define NPY_INT8_FMT NPY_SHORT_FMT +#define NPY_UINT8_FMT NPY_USHORT_FMT +#endif +#elif NPY_BITSOF_SHORT == 16 +#ifndef NPY_INT16 +#define NPY_INT16 NPY_SHORT +#define NPY_UINT16 NPY_USHORT + typedef short npy_int16; + typedef unsigned short npy_uint16; +# define PyInt16ScalarObject PyShortScalarObject +# define PyInt16ArrType_Type PyShortArrType_Type +# define PyUInt16ScalarObject PyUShortScalarObject +# define PyUInt16ArrType_Type PyUShortArrType_Type +#define NPY_INT16_FMT NPY_SHORT_FMT +#define NPY_UINT16_FMT NPY_USHORT_FMT +#endif +#elif NPY_BITSOF_SHORT == 32 +#ifndef NPY_INT32 +#define NPY_INT32 NPY_SHORT +#define NPY_UINT32 NPY_USHORT + typedef short npy_int32; + typedef unsigned short npy_uint32; + typedef unsigned short npy_ucs4; +# define PyInt32ScalarObject PyShortScalarObject +# define PyInt32ArrType_Type PyShortArrType_Type +# define PyUInt32ScalarObject PyUShortScalarObject +# define PyUInt32ArrType_Type PyUShortArrType_Type +#define NPY_INT32_FMT NPY_SHORT_FMT +#define NPY_UINT32_FMT NPY_USHORT_FMT +#endif +#elif NPY_BITSOF_SHORT == 64 +#ifndef NPY_INT64 +#define NPY_INT64 NPY_SHORT +#define NPY_UINT64 NPY_USHORT + typedef short npy_int64; + typedef unsigned short npy_uint64; +# define PyInt64ScalarObject PyShortScalarObject +# define PyInt64ArrType_Type PyShortArrType_Type +# define PyUInt64ScalarObject PyUShortScalarObject +# define PyUInt64ArrType_Type PyUShortArrType_Type +#define NPY_INT64_FMT NPY_SHORT_FMT +#define NPY_UINT64_FMT NPY_USHORT_FMT +# define MyPyLong_FromInt64 PyLong_FromLong +# define MyPyLong_AsInt64 PyLong_AsLong +#endif +#elif NPY_BITSOF_SHORT == 128 +#ifndef NPY_INT128 +#define NPY_INT128 NPY_SHORT +#define NPY_UINT128 NPY_USHORT + typedef short npy_int128; + typedef unsigned short npy_uint128; +# define PyInt128ScalarObject PyShortScalarObject +# define PyInt128ArrType_Type PyShortArrType_Type +# define PyUInt128ScalarObject PyUShortScalarObject +# define PyUInt128ArrType_Type PyUShortArrType_Type +#define NPY_INT128_FMT NPY_SHORT_FMT +#define NPY_UINT128_FMT NPY_USHORT_FMT +#endif +#endif + + +#if NPY_BITSOF_CHAR == 8 +#ifndef NPY_INT8 +#define NPY_INT8 NPY_BYTE +#define NPY_UINT8 NPY_UBYTE + typedef signed char npy_int8; + typedef unsigned char npy_uint8; +# define PyInt8ScalarObject PyByteScalarObject +# define PyInt8ArrType_Type PyByteArrType_Type +# define PyUInt8ScalarObject PyUByteScalarObject +# define PyUInt8ArrType_Type PyUByteArrType_Type +#define NPY_INT8_FMT NPY_BYTE_FMT +#define NPY_UINT8_FMT NPY_UBYTE_FMT +#endif +#elif NPY_BITSOF_CHAR == 16 +#ifndef NPY_INT16 +#define NPY_INT16 NPY_BYTE +#define NPY_UINT16 NPY_UBYTE + typedef signed char npy_int16; + typedef unsigned char npy_uint16; +# define PyInt16ScalarObject PyByteScalarObject +# define PyInt16ArrType_Type PyByteArrType_Type +# define PyUInt16ScalarObject PyUByteScalarObject +# define PyUInt16ArrType_Type PyUByteArrType_Type +#define NPY_INT16_FMT NPY_BYTE_FMT +#define NPY_UINT16_FMT NPY_UBYTE_FMT +#endif +#elif NPY_BITSOF_CHAR == 32 +#ifndef NPY_INT32 +#define NPY_INT32 NPY_BYTE +#define NPY_UINT32 NPY_UBYTE + typedef signed char npy_int32; + typedef unsigned char npy_uint32; + typedef unsigned char npy_ucs4; +# define PyInt32ScalarObject PyByteScalarObject +# define PyInt32ArrType_Type PyByteArrType_Type +# define PyUInt32ScalarObject PyUByteScalarObject +# define PyUInt32ArrType_Type PyUByteArrType_Type +#define NPY_INT32_FMT NPY_BYTE_FMT +#define NPY_UINT32_FMT NPY_UBYTE_FMT +#endif +#elif NPY_BITSOF_CHAR == 64 +#ifndef NPY_INT64 +#define NPY_INT64 NPY_BYTE +#define NPY_UINT64 NPY_UBYTE + typedef signed char npy_int64; + typedef unsigned char npy_uint64; +# define PyInt64ScalarObject PyByteScalarObject +# define PyInt64ArrType_Type PyByteArrType_Type +# define PyUInt64ScalarObject PyUByteScalarObject +# define PyUInt64ArrType_Type PyUByteArrType_Type +#define NPY_INT64_FMT NPY_BYTE_FMT +#define NPY_UINT64_FMT NPY_UBYTE_FMT +# define MyPyLong_FromInt64 PyLong_FromLong +# define MyPyLong_AsInt64 PyLong_AsLong +#endif +#elif NPY_BITSOF_CHAR == 128 +#ifndef NPY_INT128 +#define NPY_INT128 NPY_BYTE +#define NPY_UINT128 NPY_UBYTE + typedef signed char npy_int128; + typedef unsigned char npy_uint128; +# define PyInt128ScalarObject PyByteScalarObject +# define PyInt128ArrType_Type PyByteArrType_Type +# define PyUInt128ScalarObject PyUByteScalarObject +# define PyUInt128ArrType_Type PyUByteArrType_Type +#define NPY_INT128_FMT NPY_BYTE_FMT +#define NPY_UINT128_FMT NPY_UBYTE_FMT +#endif +#endif + + + +#if NPY_BITSOF_DOUBLE == 32 +#ifndef NPY_FLOAT32 +#define NPY_FLOAT32 NPY_DOUBLE +#define NPY_COMPLEX64 NPY_CDOUBLE + typedef double npy_float32; + typedef npy_cdouble npy_complex64; +# define PyFloat32ScalarObject PyDoubleScalarObject +# define PyComplex64ScalarObject PyCDoubleScalarObject +# define PyFloat32ArrType_Type PyDoubleArrType_Type +# define PyComplex64ArrType_Type PyCDoubleArrType_Type +#define NPY_FLOAT32_FMT NPY_DOUBLE_FMT +#define NPY_COMPLEX64_FMT NPY_CDOUBLE_FMT +#endif +#elif NPY_BITSOF_DOUBLE == 64 +#ifndef NPY_FLOAT64 +#define NPY_FLOAT64 NPY_DOUBLE +#define NPY_COMPLEX128 NPY_CDOUBLE + typedef double npy_float64; + typedef npy_cdouble npy_complex128; +# define PyFloat64ScalarObject PyDoubleScalarObject +# define PyComplex128ScalarObject PyCDoubleScalarObject +# define PyFloat64ArrType_Type PyDoubleArrType_Type +# define PyComplex128ArrType_Type PyCDoubleArrType_Type +#define NPY_FLOAT64_FMT NPY_DOUBLE_FMT +#define NPY_COMPLEX128_FMT NPY_CDOUBLE_FMT +#endif +#elif NPY_BITSOF_DOUBLE == 80 +#ifndef NPY_FLOAT80 +#define NPY_FLOAT80 NPY_DOUBLE +#define NPY_COMPLEX160 NPY_CDOUBLE + typedef double npy_float80; + typedef npy_cdouble npy_complex160; +# define PyFloat80ScalarObject PyDoubleScalarObject +# define PyComplex160ScalarObject PyCDoubleScalarObject +# define PyFloat80ArrType_Type PyDoubleArrType_Type +# define PyComplex160ArrType_Type PyCDoubleArrType_Type +#define NPY_FLOAT80_FMT NPY_DOUBLE_FMT +#define NPY_COMPLEX160_FMT NPY_CDOUBLE_FMT +#endif +#elif NPY_BITSOF_DOUBLE == 96 +#ifndef NPY_FLOAT96 +#define NPY_FLOAT96 NPY_DOUBLE +#define NPY_COMPLEX192 NPY_CDOUBLE + typedef double npy_float96; + typedef npy_cdouble npy_complex192; +# define PyFloat96ScalarObject PyDoubleScalarObject +# define PyComplex192ScalarObject PyCDoubleScalarObject +# define PyFloat96ArrType_Type PyDoubleArrType_Type +# define PyComplex192ArrType_Type PyCDoubleArrType_Type +#define NPY_FLOAT96_FMT NPY_DOUBLE_FMT +#define NPY_COMPLEX192_FMT NPY_CDOUBLE_FMT +#endif +#elif NPY_BITSOF_DOUBLE == 128 +#ifndef NPY_FLOAT128 +#define NPY_FLOAT128 NPY_DOUBLE +#define NPY_COMPLEX256 NPY_CDOUBLE + typedef double npy_float128; + typedef npy_cdouble npy_complex256; +# define PyFloat128ScalarObject PyDoubleScalarObject +# define PyComplex256ScalarObject PyCDoubleScalarObject +# define PyFloat128ArrType_Type PyDoubleArrType_Type +# define PyComplex256ArrType_Type PyCDoubleArrType_Type +#define NPY_FLOAT128_FMT NPY_DOUBLE_FMT +#define NPY_COMPLEX256_FMT NPY_CDOUBLE_FMT +#endif +#endif + + + +#if NPY_BITSOF_FLOAT == 32 +#ifndef NPY_FLOAT32 +#define NPY_FLOAT32 NPY_FLOAT +#define NPY_COMPLEX64 NPY_CFLOAT + typedef float npy_float32; + typedef npy_cfloat npy_complex64; +# define PyFloat32ScalarObject PyFloatScalarObject +# define PyComplex64ScalarObject PyCFloatScalarObject +# define PyFloat32ArrType_Type PyFloatArrType_Type +# define PyComplex64ArrType_Type PyCFloatArrType_Type +#define NPY_FLOAT32_FMT NPY_FLOAT_FMT +#define NPY_COMPLEX64_FMT NPY_CFLOAT_FMT +#endif +#elif NPY_BITSOF_FLOAT == 64 +#ifndef NPY_FLOAT64 +#define NPY_FLOAT64 NPY_FLOAT +#define NPY_COMPLEX128 NPY_CFLOAT + typedef float npy_float64; + typedef npy_cfloat npy_complex128; +# define PyFloat64ScalarObject PyFloatScalarObject +# define PyComplex128ScalarObject PyCFloatScalarObject +# define PyFloat64ArrType_Type PyFloatArrType_Type +# define PyComplex128ArrType_Type PyCFloatArrType_Type +#define NPY_FLOAT64_FMT NPY_FLOAT_FMT +#define NPY_COMPLEX128_FMT NPY_CFLOAT_FMT +#endif +#elif NPY_BITSOF_FLOAT == 80 +#ifndef NPY_FLOAT80 +#define NPY_FLOAT80 NPY_FLOAT +#define NPY_COMPLEX160 NPY_CFLOAT + typedef float npy_float80; + typedef npy_cfloat npy_complex160; +# define PyFloat80ScalarObject PyFloatScalarObject +# define PyComplex160ScalarObject PyCFloatScalarObject +# define PyFloat80ArrType_Type PyFloatArrType_Type +# define PyComplex160ArrType_Type PyCFloatArrType_Type +#define NPY_FLOAT80_FMT NPY_FLOAT_FMT +#define NPY_COMPLEX160_FMT NPY_CFLOAT_FMT +#endif +#elif NPY_BITSOF_FLOAT == 96 +#ifndef NPY_FLOAT96 +#define NPY_FLOAT96 NPY_FLOAT +#define NPY_COMPLEX192 NPY_CFLOAT + typedef float npy_float96; + typedef npy_cfloat npy_complex192; +# define PyFloat96ScalarObject PyFloatScalarObject +# define PyComplex192ScalarObject PyCFloatScalarObject +# define PyFloat96ArrType_Type PyFloatArrType_Type +# define PyComplex192ArrType_Type PyCFloatArrType_Type +#define NPY_FLOAT96_FMT NPY_FLOAT_FMT +#define NPY_COMPLEX192_FMT NPY_CFLOAT_FMT +#endif +#elif NPY_BITSOF_FLOAT == 128 +#ifndef NPY_FLOAT128 +#define NPY_FLOAT128 NPY_FLOAT +#define NPY_COMPLEX256 NPY_CFLOAT + typedef float npy_float128; + typedef npy_cfloat npy_complex256; +# define PyFloat128ScalarObject PyFloatScalarObject +# define PyComplex256ScalarObject PyCFloatScalarObject +# define PyFloat128ArrType_Type PyFloatArrType_Type +# define PyComplex256ArrType_Type PyCFloatArrType_Type +#define NPY_FLOAT128_FMT NPY_FLOAT_FMT +#define NPY_COMPLEX256_FMT NPY_CFLOAT_FMT +#endif +#endif + +/* half/float16 isn't a floating-point type in C */ +#define NPY_FLOAT16 NPY_HALF +typedef npy_uint16 npy_half; +typedef npy_half npy_float16; + +#if NPY_BITSOF_LONGDOUBLE == 32 +#ifndef NPY_FLOAT32 +#define NPY_FLOAT32 NPY_LONGDOUBLE +#define NPY_COMPLEX64 NPY_CLONGDOUBLE + typedef npy_longdouble npy_float32; + typedef npy_clongdouble npy_complex64; +# define PyFloat32ScalarObject PyLongDoubleScalarObject +# define PyComplex64ScalarObject PyCLongDoubleScalarObject +# define PyFloat32ArrType_Type PyLongDoubleArrType_Type +# define PyComplex64ArrType_Type PyCLongDoubleArrType_Type +#define NPY_FLOAT32_FMT NPY_LONGDOUBLE_FMT +#define NPY_COMPLEX64_FMT NPY_CLONGDOUBLE_FMT +#endif +#elif NPY_BITSOF_LONGDOUBLE == 64 +#ifndef NPY_FLOAT64 +#define NPY_FLOAT64 NPY_LONGDOUBLE +#define NPY_COMPLEX128 NPY_CLONGDOUBLE + typedef npy_longdouble npy_float64; + typedef npy_clongdouble npy_complex128; +# define PyFloat64ScalarObject PyLongDoubleScalarObject +# define PyComplex128ScalarObject PyCLongDoubleScalarObject +# define PyFloat64ArrType_Type PyLongDoubleArrType_Type +# define PyComplex128ArrType_Type PyCLongDoubleArrType_Type +#define NPY_FLOAT64_FMT NPY_LONGDOUBLE_FMT +#define NPY_COMPLEX128_FMT NPY_CLONGDOUBLE_FMT +#endif +#elif NPY_BITSOF_LONGDOUBLE == 80 +#ifndef NPY_FLOAT80 +#define NPY_FLOAT80 NPY_LONGDOUBLE +#define NPY_COMPLEX160 NPY_CLONGDOUBLE + typedef npy_longdouble npy_float80; + typedef npy_clongdouble npy_complex160; +# define PyFloat80ScalarObject PyLongDoubleScalarObject +# define PyComplex160ScalarObject PyCLongDoubleScalarObject +# define PyFloat80ArrType_Type PyLongDoubleArrType_Type +# define PyComplex160ArrType_Type PyCLongDoubleArrType_Type +#define NPY_FLOAT80_FMT NPY_LONGDOUBLE_FMT +#define NPY_COMPLEX160_FMT NPY_CLONGDOUBLE_FMT +#endif +#elif NPY_BITSOF_LONGDOUBLE == 96 +#ifndef NPY_FLOAT96 +#define NPY_FLOAT96 NPY_LONGDOUBLE +#define NPY_COMPLEX192 NPY_CLONGDOUBLE + typedef npy_longdouble npy_float96; + typedef npy_clongdouble npy_complex192; +# define PyFloat96ScalarObject PyLongDoubleScalarObject +# define PyComplex192ScalarObject PyCLongDoubleScalarObject +# define PyFloat96ArrType_Type PyLongDoubleArrType_Type +# define PyComplex192ArrType_Type PyCLongDoubleArrType_Type +#define NPY_FLOAT96_FMT NPY_LONGDOUBLE_FMT +#define NPY_COMPLEX192_FMT NPY_CLONGDOUBLE_FMT +#endif +#elif NPY_BITSOF_LONGDOUBLE == 128 +#ifndef NPY_FLOAT128 +#define NPY_FLOAT128 NPY_LONGDOUBLE +#define NPY_COMPLEX256 NPY_CLONGDOUBLE + typedef npy_longdouble npy_float128; + typedef npy_clongdouble npy_complex256; +# define PyFloat128ScalarObject PyLongDoubleScalarObject +# define PyComplex256ScalarObject PyCLongDoubleScalarObject +# define PyFloat128ArrType_Type PyLongDoubleArrType_Type +# define PyComplex256ArrType_Type PyCLongDoubleArrType_Type +#define NPY_FLOAT128_FMT NPY_LONGDOUBLE_FMT +#define NPY_COMPLEX256_FMT NPY_CLONGDOUBLE_FMT +#endif +#elif NPY_BITSOF_LONGDOUBLE == 256 +#define NPY_FLOAT256 NPY_LONGDOUBLE +#define NPY_COMPLEX512 NPY_CLONGDOUBLE + typedef npy_longdouble npy_float256; + typedef npy_clongdouble npy_complex512; +# define PyFloat256ScalarObject PyLongDoubleScalarObject +# define PyComplex512ScalarObject PyCLongDoubleScalarObject +# define PyFloat256ArrType_Type PyLongDoubleArrType_Type +# define PyComplex512ArrType_Type PyCLongDoubleArrType_Type +#define NPY_FLOAT256_FMT NPY_LONGDOUBLE_FMT +#define NPY_COMPLEX512_FMT NPY_CLONGDOUBLE_FMT +#endif + +/* datetime typedefs */ +typedef npy_int64 npy_timedelta; +typedef npy_int64 npy_datetime; +#define NPY_DATETIME_FMT NPY_INT64_FMT +#define NPY_TIMEDELTA_FMT NPY_INT64_FMT + +/* End of typedefs for numarray style bit-width names */ + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NPY_COMMON_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_cpu.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_cpu.h new file mode 100644 index 0000000000000000000000000000000000000000..a19f8e6bbdd90f3b69a1f2b2f8086a356910c8a3 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_cpu.h @@ -0,0 +1,129 @@ +/* + * This set (target) cpu specific macros: + * - Possible values: + * NPY_CPU_X86 + * NPY_CPU_AMD64 + * NPY_CPU_PPC + * NPY_CPU_PPC64 + * NPY_CPU_PPC64LE + * NPY_CPU_SPARC + * NPY_CPU_S390 + * NPY_CPU_IA64 + * NPY_CPU_HPPA + * NPY_CPU_ALPHA + * NPY_CPU_ARMEL + * NPY_CPU_ARMEB + * NPY_CPU_SH_LE + * NPY_CPU_SH_BE + * NPY_CPU_ARCEL + * NPY_CPU_ARCEB + * NPY_CPU_RISCV64 + * NPY_CPU_LOONGARCH + * NPY_CPU_WASM + */ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_CPU_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_CPU_H_ + +#include "numpyconfig.h" + +#if defined( __i386__ ) || defined(i386) || defined(_M_IX86) + /* + * __i386__ is defined by gcc and Intel compiler on Linux, + * _M_IX86 by VS compiler, + * i386 by Sun compilers on opensolaris at least + */ + #define NPY_CPU_X86 +#elif defined(__x86_64__) || defined(__amd64__) || defined(__x86_64) || defined(_M_AMD64) + /* + * both __x86_64__ and __amd64__ are defined by gcc + * __x86_64 defined by sun compiler on opensolaris at least + * _M_AMD64 defined by MS compiler + */ + #define NPY_CPU_AMD64 +#elif defined(__powerpc64__) && defined(__LITTLE_ENDIAN__) + #define NPY_CPU_PPC64LE +#elif defined(__powerpc64__) && defined(__BIG_ENDIAN__) + #define NPY_CPU_PPC64 +#elif defined(__ppc__) || defined(__powerpc__) || defined(_ARCH_PPC) + /* + * __ppc__ is defined by gcc, I remember having seen __powerpc__ once, + * but can't find it ATM + * _ARCH_PPC is used by at least gcc on AIX + * As __powerpc__ and _ARCH_PPC are also defined by PPC64 check + * for those specifically first before defaulting to ppc + */ + #define NPY_CPU_PPC +#elif defined(__sparc__) || defined(__sparc) + /* __sparc__ is defined by gcc and Forte (e.g. Sun) compilers */ + #define NPY_CPU_SPARC +#elif defined(__s390__) + #define NPY_CPU_S390 +#elif defined(__ia64) + #define NPY_CPU_IA64 +#elif defined(__hppa) + #define NPY_CPU_HPPA +#elif defined(__alpha__) + #define NPY_CPU_ALPHA +#elif defined(__arm__) || defined(__aarch64__) || defined(_M_ARM64) + /* _M_ARM64 is defined in MSVC for ARM64 compilation on Windows */ + #if defined(__ARMEB__) || defined(__AARCH64EB__) + #if defined(__ARM_32BIT_STATE) + #define NPY_CPU_ARMEB_AARCH32 + #elif defined(__ARM_64BIT_STATE) + #define NPY_CPU_ARMEB_AARCH64 + #else + #define NPY_CPU_ARMEB + #endif + #elif defined(__ARMEL__) || defined(__AARCH64EL__) || defined(_M_ARM64) + #if defined(__ARM_32BIT_STATE) + #define NPY_CPU_ARMEL_AARCH32 + #elif defined(__ARM_64BIT_STATE) || defined(_M_ARM64) || defined(__AARCH64EL__) + #define NPY_CPU_ARMEL_AARCH64 + #else + #define NPY_CPU_ARMEL + #endif + #else + # error Unknown ARM CPU, please report this to numpy maintainers with \ + information about your platform (OS, CPU and compiler) + #endif +#elif defined(__sh__) && defined(__LITTLE_ENDIAN__) + #define NPY_CPU_SH_LE +#elif defined(__sh__) && defined(__BIG_ENDIAN__) + #define NPY_CPU_SH_BE +#elif defined(__MIPSEL__) + #define NPY_CPU_MIPSEL +#elif defined(__MIPSEB__) + #define NPY_CPU_MIPSEB +#elif defined(__or1k__) + #define NPY_CPU_OR1K +#elif defined(__mc68000__) + #define NPY_CPU_M68K +#elif defined(__arc__) && defined(__LITTLE_ENDIAN__) + #define NPY_CPU_ARCEL +#elif defined(__arc__) && defined(__BIG_ENDIAN__) + #define NPY_CPU_ARCEB +#elif defined(__riscv) && defined(__riscv_xlen) && __riscv_xlen == 64 + #define NPY_CPU_RISCV64 +#elif defined(__loongarch__) + #define NPY_CPU_LOONGARCH +#elif defined(__EMSCRIPTEN__) + /* __EMSCRIPTEN__ is defined by emscripten: an LLVM-to-Web compiler */ + #define NPY_CPU_WASM +#else + #error Unknown CPU, please report this to numpy maintainers with \ + information about your platform (OS, CPU and compiler) +#endif + +/* + * Except for the following architectures, memory access is limited to the natural + * alignment of data types otherwise it may lead to bus error or performance regression. + * For more details about unaligned access, see https://www.kernel.org/doc/Documentation/unaligned-memory-access.txt. +*/ +#if defined(NPY_CPU_X86) || defined(NPY_CPU_AMD64) || defined(__aarch64__) || defined(__powerpc64__) + #define NPY_ALIGNMENT_REQUIRED 0 +#endif +#ifndef NPY_ALIGNMENT_REQUIRED + #define NPY_ALIGNMENT_REQUIRED 1 +#endif + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NPY_CPU_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_endian.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_endian.h new file mode 100644 index 0000000000000000000000000000000000000000..5e58a7f52cee2c21e8f3a4bbc535e7c0982f7de0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_endian.h @@ -0,0 +1,77 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_ENDIAN_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_ENDIAN_H_ + +/* + * NPY_BYTE_ORDER is set to the same value as BYTE_ORDER set by glibc in + * endian.h + */ + +#if defined(NPY_HAVE_ENDIAN_H) || defined(NPY_HAVE_SYS_ENDIAN_H) + /* Use endian.h if available */ + + #if defined(NPY_HAVE_ENDIAN_H) + #include + #elif defined(NPY_HAVE_SYS_ENDIAN_H) + #include + #endif + + #if defined(BYTE_ORDER) && defined(BIG_ENDIAN) && defined(LITTLE_ENDIAN) + #define NPY_BYTE_ORDER BYTE_ORDER + #define NPY_LITTLE_ENDIAN LITTLE_ENDIAN + #define NPY_BIG_ENDIAN BIG_ENDIAN + #elif defined(_BYTE_ORDER) && defined(_BIG_ENDIAN) && defined(_LITTLE_ENDIAN) + #define NPY_BYTE_ORDER _BYTE_ORDER + #define NPY_LITTLE_ENDIAN _LITTLE_ENDIAN + #define NPY_BIG_ENDIAN _BIG_ENDIAN + #elif defined(__BYTE_ORDER) && defined(__BIG_ENDIAN) && defined(__LITTLE_ENDIAN) + #define NPY_BYTE_ORDER __BYTE_ORDER + #define NPY_LITTLE_ENDIAN __LITTLE_ENDIAN + #define NPY_BIG_ENDIAN __BIG_ENDIAN + #endif +#endif + +#ifndef NPY_BYTE_ORDER + /* Set endianness info using target CPU */ + #include "npy_cpu.h" + + #define NPY_LITTLE_ENDIAN 1234 + #define NPY_BIG_ENDIAN 4321 + + #if defined(NPY_CPU_X86) \ + || defined(NPY_CPU_AMD64) \ + || defined(NPY_CPU_IA64) \ + || defined(NPY_CPU_ALPHA) \ + || defined(NPY_CPU_ARMEL) \ + || defined(NPY_CPU_ARMEL_AARCH32) \ + || defined(NPY_CPU_ARMEL_AARCH64) \ + || defined(NPY_CPU_SH_LE) \ + || defined(NPY_CPU_MIPSEL) \ + || defined(NPY_CPU_PPC64LE) \ + || defined(NPY_CPU_ARCEL) \ + || defined(NPY_CPU_RISCV64) \ + || defined(NPY_CPU_LOONGARCH) \ + || defined(NPY_CPU_WASM) + #define NPY_BYTE_ORDER NPY_LITTLE_ENDIAN + + #elif defined(NPY_CPU_PPC) \ + || defined(NPY_CPU_SPARC) \ + || defined(NPY_CPU_S390) \ + || defined(NPY_CPU_HPPA) \ + || defined(NPY_CPU_PPC64) \ + || defined(NPY_CPU_ARMEB) \ + || defined(NPY_CPU_ARMEB_AARCH32) \ + || defined(NPY_CPU_ARMEB_AARCH64) \ + || defined(NPY_CPU_SH_BE) \ + || defined(NPY_CPU_MIPSEB) \ + || defined(NPY_CPU_OR1K) \ + || defined(NPY_CPU_M68K) \ + || defined(NPY_CPU_ARCEB) + #define NPY_BYTE_ORDER NPY_BIG_ENDIAN + + #else + #error Unknown CPU: can not set endianness + #endif + +#endif + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NPY_ENDIAN_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_math.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_math.h new file mode 100644 index 0000000000000000000000000000000000000000..216b173fde58a06d46600eaa597241c1b511d9ad --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_math.h @@ -0,0 +1,578 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_MATH_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_MATH_H_ + +#include + +#include + +/* By adding static inline specifiers to npy_math function definitions when + appropriate, compiler is given the opportunity to optimize */ +#if NPY_INLINE_MATH +#define NPY_INPLACE static inline +#else +#define NPY_INPLACE +#endif + + +#ifdef __cplusplus +extern "C" { +#endif + +#define PyArray_MAX(a,b) (((a)>(b))?(a):(b)) +#define PyArray_MIN(a,b) (((a)<(b))?(a):(b)) + +/* + * NAN and INFINITY like macros (same behavior as glibc for NAN, same as C99 + * for INFINITY) + * + * XXX: I should test whether INFINITY and NAN are available on the platform + */ +static inline float __npy_inff(void) +{ + const union { npy_uint32 __i; float __f;} __bint = {0x7f800000UL}; + return __bint.__f; +} + +static inline float __npy_nanf(void) +{ + const union { npy_uint32 __i; float __f;} __bint = {0x7fc00000UL}; + return __bint.__f; +} + +static inline float __npy_pzerof(void) +{ + const union { npy_uint32 __i; float __f;} __bint = {0x00000000UL}; + return __bint.__f; +} + +static inline float __npy_nzerof(void) +{ + const union { npy_uint32 __i; float __f;} __bint = {0x80000000UL}; + return __bint.__f; +} + +#define NPY_INFINITYF __npy_inff() +#define NPY_NANF __npy_nanf() +#define NPY_PZEROF __npy_pzerof() +#define NPY_NZEROF __npy_nzerof() + +#define NPY_INFINITY ((npy_double)NPY_INFINITYF) +#define NPY_NAN ((npy_double)NPY_NANF) +#define NPY_PZERO ((npy_double)NPY_PZEROF) +#define NPY_NZERO ((npy_double)NPY_NZEROF) + +#define NPY_INFINITYL ((npy_longdouble)NPY_INFINITYF) +#define NPY_NANL ((npy_longdouble)NPY_NANF) +#define NPY_PZEROL ((npy_longdouble)NPY_PZEROF) +#define NPY_NZEROL ((npy_longdouble)NPY_NZEROF) + +/* + * Useful constants + */ +#define NPY_E 2.718281828459045235360287471352662498 /* e */ +#define NPY_LOG2E 1.442695040888963407359924681001892137 /* log_2 e */ +#define NPY_LOG10E 0.434294481903251827651128918916605082 /* log_10 e */ +#define NPY_LOGE2 0.693147180559945309417232121458176568 /* log_e 2 */ +#define NPY_LOGE10 2.302585092994045684017991454684364208 /* log_e 10 */ +#define NPY_PI 3.141592653589793238462643383279502884 /* pi */ +#define NPY_PI_2 1.570796326794896619231321691639751442 /* pi/2 */ +#define NPY_PI_4 0.785398163397448309615660845819875721 /* pi/4 */ +#define NPY_1_PI 0.318309886183790671537767526745028724 /* 1/pi */ +#define NPY_2_PI 0.636619772367581343075535053490057448 /* 2/pi */ +#define NPY_EULER 0.577215664901532860606512090082402431 /* Euler constant */ +#define NPY_SQRT2 1.414213562373095048801688724209698079 /* sqrt(2) */ +#define NPY_SQRT1_2 0.707106781186547524400844362104849039 /* 1/sqrt(2) */ + +#define NPY_Ef 2.718281828459045235360287471352662498F /* e */ +#define NPY_LOG2Ef 1.442695040888963407359924681001892137F /* log_2 e */ +#define NPY_LOG10Ef 0.434294481903251827651128918916605082F /* log_10 e */ +#define NPY_LOGE2f 0.693147180559945309417232121458176568F /* log_e 2 */ +#define NPY_LOGE10f 2.302585092994045684017991454684364208F /* log_e 10 */ +#define NPY_PIf 3.141592653589793238462643383279502884F /* pi */ +#define NPY_PI_2f 1.570796326794896619231321691639751442F /* pi/2 */ +#define NPY_PI_4f 0.785398163397448309615660845819875721F /* pi/4 */ +#define NPY_1_PIf 0.318309886183790671537767526745028724F /* 1/pi */ +#define NPY_2_PIf 0.636619772367581343075535053490057448F /* 2/pi */ +#define NPY_EULERf 0.577215664901532860606512090082402431F /* Euler constant */ +#define NPY_SQRT2f 1.414213562373095048801688724209698079F /* sqrt(2) */ +#define NPY_SQRT1_2f 0.707106781186547524400844362104849039F /* 1/sqrt(2) */ + +#define NPY_El 2.718281828459045235360287471352662498L /* e */ +#define NPY_LOG2El 1.442695040888963407359924681001892137L /* log_2 e */ +#define NPY_LOG10El 0.434294481903251827651128918916605082L /* log_10 e */ +#define NPY_LOGE2l 0.693147180559945309417232121458176568L /* log_e 2 */ +#define NPY_LOGE10l 2.302585092994045684017991454684364208L /* log_e 10 */ +#define NPY_PIl 3.141592653589793238462643383279502884L /* pi */ +#define NPY_PI_2l 1.570796326794896619231321691639751442L /* pi/2 */ +#define NPY_PI_4l 0.785398163397448309615660845819875721L /* pi/4 */ +#define NPY_1_PIl 0.318309886183790671537767526745028724L /* 1/pi */ +#define NPY_2_PIl 0.636619772367581343075535053490057448L /* 2/pi */ +#define NPY_EULERl 0.577215664901532860606512090082402431L /* Euler constant */ +#define NPY_SQRT2l 1.414213562373095048801688724209698079L /* sqrt(2) */ +#define NPY_SQRT1_2l 0.707106781186547524400844362104849039L /* 1/sqrt(2) */ + +/* + * Integer functions. + */ +NPY_INPLACE npy_uint npy_gcdu(npy_uint a, npy_uint b); +NPY_INPLACE npy_uint npy_lcmu(npy_uint a, npy_uint b); +NPY_INPLACE npy_ulong npy_gcdul(npy_ulong a, npy_ulong b); +NPY_INPLACE npy_ulong npy_lcmul(npy_ulong a, npy_ulong b); +NPY_INPLACE npy_ulonglong npy_gcdull(npy_ulonglong a, npy_ulonglong b); +NPY_INPLACE npy_ulonglong npy_lcmull(npy_ulonglong a, npy_ulonglong b); + +NPY_INPLACE npy_int npy_gcd(npy_int a, npy_int b); +NPY_INPLACE npy_int npy_lcm(npy_int a, npy_int b); +NPY_INPLACE npy_long npy_gcdl(npy_long a, npy_long b); +NPY_INPLACE npy_long npy_lcml(npy_long a, npy_long b); +NPY_INPLACE npy_longlong npy_gcdll(npy_longlong a, npy_longlong b); +NPY_INPLACE npy_longlong npy_lcmll(npy_longlong a, npy_longlong b); + +NPY_INPLACE npy_ubyte npy_rshiftuhh(npy_ubyte a, npy_ubyte b); +NPY_INPLACE npy_ubyte npy_lshiftuhh(npy_ubyte a, npy_ubyte b); +NPY_INPLACE npy_ushort npy_rshiftuh(npy_ushort a, npy_ushort b); +NPY_INPLACE npy_ushort npy_lshiftuh(npy_ushort a, npy_ushort b); +NPY_INPLACE npy_uint npy_rshiftu(npy_uint a, npy_uint b); +NPY_INPLACE npy_uint npy_lshiftu(npy_uint a, npy_uint b); +NPY_INPLACE npy_ulong npy_rshiftul(npy_ulong a, npy_ulong b); +NPY_INPLACE npy_ulong npy_lshiftul(npy_ulong a, npy_ulong b); +NPY_INPLACE npy_ulonglong npy_rshiftull(npy_ulonglong a, npy_ulonglong b); +NPY_INPLACE npy_ulonglong npy_lshiftull(npy_ulonglong a, npy_ulonglong b); + +NPY_INPLACE npy_byte npy_rshifthh(npy_byte a, npy_byte b); +NPY_INPLACE npy_byte npy_lshifthh(npy_byte a, npy_byte b); +NPY_INPLACE npy_short npy_rshifth(npy_short a, npy_short b); +NPY_INPLACE npy_short npy_lshifth(npy_short a, npy_short b); +NPY_INPLACE npy_int npy_rshift(npy_int a, npy_int b); +NPY_INPLACE npy_int npy_lshift(npy_int a, npy_int b); +NPY_INPLACE npy_long npy_rshiftl(npy_long a, npy_long b); +NPY_INPLACE npy_long npy_lshiftl(npy_long a, npy_long b); +NPY_INPLACE npy_longlong npy_rshiftll(npy_longlong a, npy_longlong b); +NPY_INPLACE npy_longlong npy_lshiftll(npy_longlong a, npy_longlong b); + +NPY_INPLACE uint8_t npy_popcountuhh(npy_ubyte a); +NPY_INPLACE uint8_t npy_popcountuh(npy_ushort a); +NPY_INPLACE uint8_t npy_popcountu(npy_uint a); +NPY_INPLACE uint8_t npy_popcountul(npy_ulong a); +NPY_INPLACE uint8_t npy_popcountull(npy_ulonglong a); +NPY_INPLACE uint8_t npy_popcounthh(npy_byte a); +NPY_INPLACE uint8_t npy_popcounth(npy_short a); +NPY_INPLACE uint8_t npy_popcount(npy_int a); +NPY_INPLACE uint8_t npy_popcountl(npy_long a); +NPY_INPLACE uint8_t npy_popcountll(npy_longlong a); + +/* + * C99 double math funcs that need fixups or are blocklist-able + */ +NPY_INPLACE double npy_sin(double x); +NPY_INPLACE double npy_cos(double x); +NPY_INPLACE double npy_tan(double x); +NPY_INPLACE double npy_hypot(double x, double y); +NPY_INPLACE double npy_log2(double x); +NPY_INPLACE double npy_atan2(double x, double y); + +/* Mandatory C99 double math funcs, no blocklisting or fixups */ +/* defined for legacy reasons, should be deprecated at some point */ +#define npy_sinh sinh +#define npy_cosh cosh +#define npy_tanh tanh +#define npy_asin asin +#define npy_acos acos +#define npy_atan atan +#define npy_log log +#define npy_log10 log10 +#define npy_cbrt cbrt +#define npy_fabs fabs +#define npy_ceil ceil +#define npy_fmod fmod +#define npy_floor floor +#define npy_expm1 expm1 +#define npy_log1p log1p +#define npy_acosh acosh +#define npy_asinh asinh +#define npy_atanh atanh +#define npy_rint rint +#define npy_trunc trunc +#define npy_exp2 exp2 +#define npy_frexp frexp +#define npy_ldexp ldexp +#define npy_copysign copysign +#define npy_exp exp +#define npy_sqrt sqrt +#define npy_pow pow +#define npy_modf modf +#define npy_nextafter nextafter + +double npy_spacing(double x); + +/* + * IEEE 754 fpu handling + */ + +/* use builtins to avoid function calls in tight loops + * only available if npy_config.h is available (= numpys own build) */ +#ifdef HAVE___BUILTIN_ISNAN + #define npy_isnan(x) __builtin_isnan(x) +#else + #define npy_isnan(x) isnan(x) +#endif + + +/* only available if npy_config.h is available (= numpys own build) */ +#ifdef HAVE___BUILTIN_ISFINITE + #define npy_isfinite(x) __builtin_isfinite(x) +#else + #define npy_isfinite(x) isfinite((x)) +#endif + +/* only available if npy_config.h is available (= numpys own build) */ +#ifdef HAVE___BUILTIN_ISINF + #define npy_isinf(x) __builtin_isinf(x) +#else + #define npy_isinf(x) isinf((x)) +#endif + +#define npy_signbit(x) signbit((x)) + +/* + * float C99 math funcs that need fixups or are blocklist-able + */ +NPY_INPLACE float npy_sinf(float x); +NPY_INPLACE float npy_cosf(float x); +NPY_INPLACE float npy_tanf(float x); +NPY_INPLACE float npy_expf(float x); +NPY_INPLACE float npy_sqrtf(float x); +NPY_INPLACE float npy_hypotf(float x, float y); +NPY_INPLACE float npy_log2f(float x); +NPY_INPLACE float npy_atan2f(float x, float y); +NPY_INPLACE float npy_powf(float x, float y); +NPY_INPLACE float npy_modff(float x, float* y); + +/* Mandatory C99 float math funcs, no blocklisting or fixups */ +/* defined for legacy reasons, should be deprecated at some point */ + +#define npy_sinhf sinhf +#define npy_coshf coshf +#define npy_tanhf tanhf +#define npy_asinf asinf +#define npy_acosf acosf +#define npy_atanf atanf +#define npy_logf logf +#define npy_log10f log10f +#define npy_cbrtf cbrtf +#define npy_fabsf fabsf +#define npy_ceilf ceilf +#define npy_fmodf fmodf +#define npy_floorf floorf +#define npy_expm1f expm1f +#define npy_log1pf log1pf +#define npy_asinhf asinhf +#define npy_acoshf acoshf +#define npy_atanhf atanhf +#define npy_rintf rintf +#define npy_truncf truncf +#define npy_exp2f exp2f +#define npy_frexpf frexpf +#define npy_ldexpf ldexpf +#define npy_copysignf copysignf +#define npy_nextafterf nextafterf + +float npy_spacingf(float x); + +/* + * long double C99 double math funcs that need fixups or are blocklist-able + */ +NPY_INPLACE npy_longdouble npy_sinl(npy_longdouble x); +NPY_INPLACE npy_longdouble npy_cosl(npy_longdouble x); +NPY_INPLACE npy_longdouble npy_tanl(npy_longdouble x); +NPY_INPLACE npy_longdouble npy_expl(npy_longdouble x); +NPY_INPLACE npy_longdouble npy_sqrtl(npy_longdouble x); +NPY_INPLACE npy_longdouble npy_hypotl(npy_longdouble x, npy_longdouble y); +NPY_INPLACE npy_longdouble npy_log2l(npy_longdouble x); +NPY_INPLACE npy_longdouble npy_atan2l(npy_longdouble x, npy_longdouble y); +NPY_INPLACE npy_longdouble npy_powl(npy_longdouble x, npy_longdouble y); +NPY_INPLACE npy_longdouble npy_modfl(npy_longdouble x, npy_longdouble* y); + +/* Mandatory C99 double math funcs, no blocklisting or fixups */ +/* defined for legacy reasons, should be deprecated at some point */ +#define npy_sinhl sinhl +#define npy_coshl coshl +#define npy_tanhl tanhl +#define npy_fabsl fabsl +#define npy_floorl floorl +#define npy_ceill ceill +#define npy_rintl rintl +#define npy_truncl truncl +#define npy_cbrtl cbrtl +#define npy_log10l log10l +#define npy_logl logl +#define npy_expm1l expm1l +#define npy_asinl asinl +#define npy_acosl acosl +#define npy_atanl atanl +#define npy_asinhl asinhl +#define npy_acoshl acoshl +#define npy_atanhl atanhl +#define npy_log1pl log1pl +#define npy_exp2l exp2l +#define npy_fmodl fmodl +#define npy_frexpl frexpl +#define npy_ldexpl ldexpl +#define npy_copysignl copysignl +#define npy_nextafterl nextafterl + +npy_longdouble npy_spacingl(npy_longdouble x); + +/* + * Non standard functions + */ +NPY_INPLACE double npy_deg2rad(double x); +NPY_INPLACE double npy_rad2deg(double x); +NPY_INPLACE double npy_logaddexp(double x, double y); +NPY_INPLACE double npy_logaddexp2(double x, double y); +NPY_INPLACE double npy_divmod(double x, double y, double *modulus); +NPY_INPLACE double npy_heaviside(double x, double h0); + +NPY_INPLACE float npy_deg2radf(float x); +NPY_INPLACE float npy_rad2degf(float x); +NPY_INPLACE float npy_logaddexpf(float x, float y); +NPY_INPLACE float npy_logaddexp2f(float x, float y); +NPY_INPLACE float npy_divmodf(float x, float y, float *modulus); +NPY_INPLACE float npy_heavisidef(float x, float h0); + +NPY_INPLACE npy_longdouble npy_deg2radl(npy_longdouble x); +NPY_INPLACE npy_longdouble npy_rad2degl(npy_longdouble x); +NPY_INPLACE npy_longdouble npy_logaddexpl(npy_longdouble x, npy_longdouble y); +NPY_INPLACE npy_longdouble npy_logaddexp2l(npy_longdouble x, npy_longdouble y); +NPY_INPLACE npy_longdouble npy_divmodl(npy_longdouble x, npy_longdouble y, + npy_longdouble *modulus); +NPY_INPLACE npy_longdouble npy_heavisidel(npy_longdouble x, npy_longdouble h0); + +#define npy_degrees npy_rad2deg +#define npy_degreesf npy_rad2degf +#define npy_degreesl npy_rad2degl + +#define npy_radians npy_deg2rad +#define npy_radiansf npy_deg2radf +#define npy_radiansl npy_deg2radl + +/* + * Complex declarations + */ + +static inline double npy_creal(const npy_cdouble z) +{ + return ((double *) &z)[0]; +} + +static inline void npy_csetreal(npy_cdouble *z, const double r) +{ + ((double *) z)[0] = r; +} + +static inline double npy_cimag(const npy_cdouble z) +{ + return ((double *) &z)[1]; +} + +static inline void npy_csetimag(npy_cdouble *z, const double i) +{ + ((double *) z)[1] = i; +} + +static inline float npy_crealf(const npy_cfloat z) +{ + return ((float *) &z)[0]; +} + +static inline void npy_csetrealf(npy_cfloat *z, const float r) +{ + ((float *) z)[0] = r; +} + +static inline float npy_cimagf(const npy_cfloat z) +{ + return ((float *) &z)[1]; +} + +static inline void npy_csetimagf(npy_cfloat *z, const float i) +{ + ((float *) z)[1] = i; +} + +static inline npy_longdouble npy_creall(const npy_clongdouble z) +{ + return ((longdouble_t *) &z)[0]; +} + +static inline void npy_csetreall(npy_clongdouble *z, const longdouble_t r) +{ + ((longdouble_t *) z)[0] = r; +} + +static inline npy_longdouble npy_cimagl(const npy_clongdouble z) +{ + return ((longdouble_t *) &z)[1]; +} + +static inline void npy_csetimagl(npy_clongdouble *z, const longdouble_t i) +{ + ((longdouble_t *) z)[1] = i; +} + +#define NPY_CSETREAL(z, r) npy_csetreal(z, r) +#define NPY_CSETIMAG(z, i) npy_csetimag(z, i) +#define NPY_CSETREALF(z, r) npy_csetrealf(z, r) +#define NPY_CSETIMAGF(z, i) npy_csetimagf(z, i) +#define NPY_CSETREALL(z, r) npy_csetreall(z, r) +#define NPY_CSETIMAGL(z, i) npy_csetimagl(z, i) + +static inline npy_cdouble npy_cpack(double x, double y) +{ + npy_cdouble z; + npy_csetreal(&z, x); + npy_csetimag(&z, y); + return z; +} + +static inline npy_cfloat npy_cpackf(float x, float y) +{ + npy_cfloat z; + npy_csetrealf(&z, x); + npy_csetimagf(&z, y); + return z; +} + +static inline npy_clongdouble npy_cpackl(npy_longdouble x, npy_longdouble y) +{ + npy_clongdouble z; + npy_csetreall(&z, x); + npy_csetimagl(&z, y); + return z; +} + +/* + * Double precision complex functions + */ +double npy_cabs(npy_cdouble z); +double npy_carg(npy_cdouble z); + +npy_cdouble npy_cexp(npy_cdouble z); +npy_cdouble npy_clog(npy_cdouble z); +npy_cdouble npy_cpow(npy_cdouble x, npy_cdouble y); + +npy_cdouble npy_csqrt(npy_cdouble z); + +npy_cdouble npy_ccos(npy_cdouble z); +npy_cdouble npy_csin(npy_cdouble z); +npy_cdouble npy_ctan(npy_cdouble z); + +npy_cdouble npy_ccosh(npy_cdouble z); +npy_cdouble npy_csinh(npy_cdouble z); +npy_cdouble npy_ctanh(npy_cdouble z); + +npy_cdouble npy_cacos(npy_cdouble z); +npy_cdouble npy_casin(npy_cdouble z); +npy_cdouble npy_catan(npy_cdouble z); + +npy_cdouble npy_cacosh(npy_cdouble z); +npy_cdouble npy_casinh(npy_cdouble z); +npy_cdouble npy_catanh(npy_cdouble z); + +/* + * Single precision complex functions + */ +float npy_cabsf(npy_cfloat z); +float npy_cargf(npy_cfloat z); + +npy_cfloat npy_cexpf(npy_cfloat z); +npy_cfloat npy_clogf(npy_cfloat z); +npy_cfloat npy_cpowf(npy_cfloat x, npy_cfloat y); + +npy_cfloat npy_csqrtf(npy_cfloat z); + +npy_cfloat npy_ccosf(npy_cfloat z); +npy_cfloat npy_csinf(npy_cfloat z); +npy_cfloat npy_ctanf(npy_cfloat z); + +npy_cfloat npy_ccoshf(npy_cfloat z); +npy_cfloat npy_csinhf(npy_cfloat z); +npy_cfloat npy_ctanhf(npy_cfloat z); + +npy_cfloat npy_cacosf(npy_cfloat z); +npy_cfloat npy_casinf(npy_cfloat z); +npy_cfloat npy_catanf(npy_cfloat z); + +npy_cfloat npy_cacoshf(npy_cfloat z); +npy_cfloat npy_casinhf(npy_cfloat z); +npy_cfloat npy_catanhf(npy_cfloat z); + + +/* + * Extended precision complex functions + */ +npy_longdouble npy_cabsl(npy_clongdouble z); +npy_longdouble npy_cargl(npy_clongdouble z); + +npy_clongdouble npy_cexpl(npy_clongdouble z); +npy_clongdouble npy_clogl(npy_clongdouble z); +npy_clongdouble npy_cpowl(npy_clongdouble x, npy_clongdouble y); + +npy_clongdouble npy_csqrtl(npy_clongdouble z); + +npy_clongdouble npy_ccosl(npy_clongdouble z); +npy_clongdouble npy_csinl(npy_clongdouble z); +npy_clongdouble npy_ctanl(npy_clongdouble z); + +npy_clongdouble npy_ccoshl(npy_clongdouble z); +npy_clongdouble npy_csinhl(npy_clongdouble z); +npy_clongdouble npy_ctanhl(npy_clongdouble z); + +npy_clongdouble npy_cacosl(npy_clongdouble z); +npy_clongdouble npy_casinl(npy_clongdouble z); +npy_clongdouble npy_catanl(npy_clongdouble z); + +npy_clongdouble npy_cacoshl(npy_clongdouble z); +npy_clongdouble npy_casinhl(npy_clongdouble z); +npy_clongdouble npy_catanhl(npy_clongdouble z); + + +/* + * Functions that set the floating point error + * status word. + */ + +/* + * platform-dependent code translates floating point + * status to an integer sum of these values + */ +#define NPY_FPE_DIVIDEBYZERO 1 +#define NPY_FPE_OVERFLOW 2 +#define NPY_FPE_UNDERFLOW 4 +#define NPY_FPE_INVALID 8 + +int npy_clear_floatstatus_barrier(char*); +int npy_get_floatstatus_barrier(char*); +/* + * use caution with these - clang and gcc8.1 are known to reorder calls + * to this form of the function which can defeat the check. The _barrier + * form of the call is preferable, where the argument is + * (char*)&local_variable + */ +int npy_clear_floatstatus(void); +int npy_get_floatstatus(void); + +void npy_set_floatstatus_divbyzero(void); +void npy_set_floatstatus_overflow(void); +void npy_set_floatstatus_underflow(void); +void npy_set_floatstatus_invalid(void); + +#ifdef __cplusplus +} +#endif + +#if NPY_INLINE_MATH +#include "npy_math_internal.h" +#endif + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NPY_MATH_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_no_deprecated_api.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_no_deprecated_api.h new file mode 100644 index 0000000000000000000000000000000000000000..39658c0bd2d61aacd25f75439e81ea16c3e33db8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_no_deprecated_api.h @@ -0,0 +1,20 @@ +/* + * This include file is provided for inclusion in Cython *.pyd files where + * one would like to define the NPY_NO_DEPRECATED_API macro. It can be + * included by + * + * cdef extern from "npy_no_deprecated_api.h": pass + * + */ +#ifndef NPY_NO_DEPRECATED_API + +/* put this check here since there may be multiple includes in C extensions. */ +#if defined(NUMPY_CORE_INCLUDE_NUMPY_NDARRAYTYPES_H_) || \ + defined(NUMPY_CORE_INCLUDE_NUMPY_NPY_DEPRECATED_API_H) || \ + defined(NUMPY_CORE_INCLUDE_NUMPY_OLD_DEFINES_H_) +#error "npy_no_deprecated_api.h" must be first among numpy includes. +#else +#define NPY_NO_DEPRECATED_API NPY_API_VERSION +#endif + +#endif /* NPY_NO_DEPRECATED_API */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_os.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_os.h new file mode 100644 index 0000000000000000000000000000000000000000..0ce5d78b42c0e53c660654e297446d7811901aa2 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/npy_os.h @@ -0,0 +1,42 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_OS_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_OS_H_ + +#if defined(linux) || defined(__linux) || defined(__linux__) + #define NPY_OS_LINUX +#elif defined(__FreeBSD__) || defined(__NetBSD__) || \ + defined(__OpenBSD__) || defined(__DragonFly__) + #define NPY_OS_BSD + #ifdef __FreeBSD__ + #define NPY_OS_FREEBSD + #elif defined(__NetBSD__) + #define NPY_OS_NETBSD + #elif defined(__OpenBSD__) + #define NPY_OS_OPENBSD + #elif defined(__DragonFly__) + #define NPY_OS_DRAGONFLY + #endif +#elif defined(sun) || defined(__sun) + #define NPY_OS_SOLARIS +#elif defined(__CYGWIN__) + #define NPY_OS_CYGWIN +/* We are on Windows.*/ +#elif defined(_WIN32) + /* We are using MinGW (64-bit or 32-bit)*/ + #if defined(__MINGW32__) || defined(__MINGW64__) + #define NPY_OS_MINGW + /* Otherwise, if _WIN64 is defined, we are targeting 64-bit Windows*/ + #elif defined(_WIN64) + #define NPY_OS_WIN64 + /* Otherwise assume we are targeting 32-bit Windows*/ + #else + #define NPY_OS_WIN32 + #endif +#elif defined(__APPLE__) + #define NPY_OS_DARWIN +#elif defined(__HAIKU__) + #define NPY_OS_HAIKU +#else + #define NPY_OS_UNKNOWN +#endif + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NPY_OS_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/numpyconfig.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/numpyconfig.h new file mode 100644 index 0000000000000000000000000000000000000000..0b6b2dda4290407906fa2e26dc62a3ad2e109268 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/numpyconfig.h @@ -0,0 +1,168 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_NPY_NUMPYCONFIG_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_NPY_NUMPYCONFIG_H_ + +#include "_numpyconfig.h" + +/* + * On Mac OS X, because there is only one configuration stage for all the archs + * in universal builds, any macro which depends on the arch needs to be + * hardcoded. + * + * Note that distutils/pip will attempt a universal2 build when Python itself + * is built as universal2, hence this hardcoding is needed even if we do not + * support universal2 wheels anymore (see gh-22796). + * This code block can be removed after we have dropped the setup.py based + * build completely. + */ +#ifdef __APPLE__ + #undef NPY_SIZEOF_LONG + + #ifdef __LP64__ + #define NPY_SIZEOF_LONG 8 + #else + #define NPY_SIZEOF_LONG 4 + #endif + + #undef NPY_SIZEOF_LONGDOUBLE + #undef NPY_SIZEOF_COMPLEX_LONGDOUBLE + #ifdef HAVE_LDOUBLE_IEEE_DOUBLE_LE + #undef HAVE_LDOUBLE_IEEE_DOUBLE_LE + #endif + #ifdef HAVE_LDOUBLE_INTEL_EXTENDED_16_BYTES_LE + #undef HAVE_LDOUBLE_INTEL_EXTENDED_16_BYTES_LE + #endif + + #if defined(__arm64__) + #define NPY_SIZEOF_LONGDOUBLE 8 + #define NPY_SIZEOF_COMPLEX_LONGDOUBLE 16 + #define HAVE_LDOUBLE_IEEE_DOUBLE_LE 1 + #elif defined(__x86_64) + #define NPY_SIZEOF_LONGDOUBLE 16 + #define NPY_SIZEOF_COMPLEX_LONGDOUBLE 32 + #define HAVE_LDOUBLE_INTEL_EXTENDED_16_BYTES_LE 1 + #elif defined (__i386) + #define NPY_SIZEOF_LONGDOUBLE 12 + #define NPY_SIZEOF_COMPLEX_LONGDOUBLE 24 + #elif defined(__ppc__) || defined (__ppc64__) + #define NPY_SIZEOF_LONGDOUBLE 16 + #define NPY_SIZEOF_COMPLEX_LONGDOUBLE 32 + #else + #error "unknown architecture" + #endif +#endif + + +/** + * To help with both NPY_TARGET_VERSION and the NPY_NO_DEPRECATED_API macro, + * we include API version numbers for specific versions of NumPy. + * To exclude all API that was deprecated as of 1.7, add the following before + * #including any NumPy headers: + * #define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION + * The same is true for NPY_TARGET_VERSION, although NumPy will default to + * a backwards compatible build anyway. + */ +#define NPY_1_7_API_VERSION 0x00000007 +#define NPY_1_8_API_VERSION 0x00000008 +#define NPY_1_9_API_VERSION 0x00000009 +#define NPY_1_10_API_VERSION 0x0000000a +#define NPY_1_11_API_VERSION 0x0000000a +#define NPY_1_12_API_VERSION 0x0000000a +#define NPY_1_13_API_VERSION 0x0000000b +#define NPY_1_14_API_VERSION 0x0000000c +#define NPY_1_15_API_VERSION 0x0000000c +#define NPY_1_16_API_VERSION 0x0000000d +#define NPY_1_17_API_VERSION 0x0000000d +#define NPY_1_18_API_VERSION 0x0000000d +#define NPY_1_19_API_VERSION 0x0000000d +#define NPY_1_20_API_VERSION 0x0000000e +#define NPY_1_21_API_VERSION 0x0000000e +#define NPY_1_22_API_VERSION 0x0000000f +#define NPY_1_23_API_VERSION 0x00000010 +#define NPY_1_24_API_VERSION 0x00000010 +#define NPY_1_25_API_VERSION 0x00000011 +#define NPY_2_0_API_VERSION 0x00000012 + + +/* + * Binary compatibility version number. This number is increased + * whenever the C-API is changed such that binary compatibility is + * broken, i.e. whenever a recompile of extension modules is needed. + */ +#define NPY_VERSION NPY_ABI_VERSION + +/* + * Minor API version we are compiling to be compatible with. The version + * Number is always increased when the API changes via: `NPY_API_VERSION` + * (and should maybe just track the NumPy version). + * + * If we have an internal build, we always target the current version of + * course. + * + * For downstream users, we default to an older version to provide them with + * maximum compatibility by default. Downstream can choose to extend that + * default, or narrow it down if they wish to use newer API. If you adjust + * this, consider the Python version support (example for 1.25.x): + * + * NumPy 1.25.x supports Python: 3.9 3.10 3.11 (3.12) + * NumPy 1.19.x supports Python: 3.6 3.7 3.8 3.9 + * NumPy 1.17.x supports Python: 3.5 3.6 3.7 3.8 + * NumPy 1.15.x supports Python: ... 3.6 3.7 + * + * Users of the stable ABI may wish to target the last Python that is not + * end of life. This would be 3.8 at NumPy 1.25 release time. + * 1.17 as default was the choice of oldest-support-numpy at the time and + * has in practice no limit (compared to 1.19). Even earlier becomes legacy. + */ +#if defined(NPY_INTERNAL_BUILD) && NPY_INTERNAL_BUILD + /* NumPy internal build, always use current version. */ + #define NPY_FEATURE_VERSION NPY_API_VERSION +#elif defined(NPY_TARGET_VERSION) && NPY_TARGET_VERSION + /* user provided a target version, use it */ + #define NPY_FEATURE_VERSION NPY_TARGET_VERSION +#else + /* Use the default (increase when dropping Python 3.9 support) */ + #define NPY_FEATURE_VERSION NPY_1_19_API_VERSION +#endif + +/* Sanity check the (requested) feature version */ +#if NPY_FEATURE_VERSION > NPY_API_VERSION + #error "NPY_TARGET_VERSION higher than NumPy headers!" +#elif NPY_FEATURE_VERSION < NPY_1_15_API_VERSION + /* No support for irrelevant old targets, no need for error, but warn. */ + #warning "Requested NumPy target lower than supported NumPy 1.15." +#endif + +/* + * We define a human readable translation to the Python version of NumPy + * for error messages (and also to allow grepping the binaries for conda). + */ +#if NPY_FEATURE_VERSION == NPY_1_7_API_VERSION + #define NPY_FEATURE_VERSION_STRING "1.7" +#elif NPY_FEATURE_VERSION == NPY_1_8_API_VERSION + #define NPY_FEATURE_VERSION_STRING "1.8" +#elif NPY_FEATURE_VERSION == NPY_1_9_API_VERSION + #define NPY_FEATURE_VERSION_STRING "1.9" +#elif NPY_FEATURE_VERSION == NPY_1_10_API_VERSION /* also 1.11, 1.12 */ + #define NPY_FEATURE_VERSION_STRING "1.10" +#elif NPY_FEATURE_VERSION == NPY_1_13_API_VERSION + #define NPY_FEATURE_VERSION_STRING "1.13" +#elif NPY_FEATURE_VERSION == NPY_1_14_API_VERSION /* also 1.15 */ + #define NPY_FEATURE_VERSION_STRING "1.14" +#elif NPY_FEATURE_VERSION == NPY_1_16_API_VERSION /* also 1.17, 1.18, 1.19 */ + #define NPY_FEATURE_VERSION_STRING "1.16" +#elif NPY_FEATURE_VERSION == NPY_1_20_API_VERSION /* also 1.21 */ + #define NPY_FEATURE_VERSION_STRING "1.20" +#elif NPY_FEATURE_VERSION == NPY_1_22_API_VERSION + #define NPY_FEATURE_VERSION_STRING "1.22" +#elif NPY_FEATURE_VERSION == NPY_1_23_API_VERSION /* also 1.24 */ + #define NPY_FEATURE_VERSION_STRING "1.23" +#elif NPY_FEATURE_VERSION == NPY_1_25_API_VERSION + #define NPY_FEATURE_VERSION_STRING "1.25" +#elif NPY_FEATURE_VERSION == NPY_2_0_API_VERSION + #define NPY_FEATURE_VERSION_STRING "2.0" +#else + #error "Missing version string define for new NumPy version." +#endif + + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_NPY_NUMPYCONFIG_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/LICENSE.txt b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/LICENSE.txt new file mode 100644 index 0000000000000000000000000000000000000000..d72a7c388d406191f2b3113efa5f89916a39d9b2 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/LICENSE.txt @@ -0,0 +1,21 @@ + zlib License + ------------ + + Copyright (C) 2010 - 2019 ridiculous_fish, + Copyright (C) 2016 - 2019 Kim Walisch, + + This software is provided 'as-is', without any express or implied + warranty. In no event will the authors be held liable for any damages + arising from the use of this software. + + Permission is granted to anyone to use this software for any purpose, + including commercial applications, and to alter it and redistribute it + freely, subject to the following restrictions: + + 1. The origin of this software must not be misrepresented; you must not + claim that you wrote the original software. If you use this software + in a product, an acknowledgment in the product documentation would be + appreciated but is not required. + 2. Altered source versions must be plainly marked as such, and must not be + misrepresented as being the original software. + 3. This notice may not be removed or altered from any source distribution. diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/bitgen.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/bitgen.h new file mode 100644 index 0000000000000000000000000000000000000000..162dd5c5753079eb1d76efa7fc8a3847c2ad6602 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/bitgen.h @@ -0,0 +1,20 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_RANDOM_BITGEN_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_RANDOM_BITGEN_H_ + +#pragma once +#include +#include +#include + +/* Must match the declaration in numpy/random/.pxd */ + +typedef struct bitgen { + void *state; + uint64_t (*next_uint64)(void *st); + uint32_t (*next_uint32)(void *st); + double (*next_double)(void *st); + uint64_t (*next_raw)(void *st); +} bitgen_t; + + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_RANDOM_BITGEN_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/distributions.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/distributions.h new file mode 100644 index 0000000000000000000000000000000000000000..e7fa4bd00d43430eb1da23bd577688d8733bb6e8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/distributions.h @@ -0,0 +1,209 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_RANDOM_DISTRIBUTIONS_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_RANDOM_DISTRIBUTIONS_H_ + +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include "numpy/npy_common.h" +#include +#include +#include + +#include "numpy/npy_math.h" +#include "numpy/random/bitgen.h" + +/* + * RAND_INT_TYPE is used to share integer generators with RandomState which + * used long in place of int64_t. If changing a distribution that uses + * RAND_INT_TYPE, then the original unmodified copy must be retained for + * use in RandomState by copying to the legacy distributions source file. + */ +#ifdef NP_RANDOM_LEGACY +#define RAND_INT_TYPE long +#define RAND_INT_MAX LONG_MAX +#else +#define RAND_INT_TYPE int64_t +#define RAND_INT_MAX INT64_MAX +#endif + +#ifdef _MSC_VER +#define DECLDIR __declspec(dllexport) +#else +#define DECLDIR extern +#endif + +#ifndef MIN +#define MIN(x, y) (((x) < (y)) ? x : y) +#define MAX(x, y) (((x) > (y)) ? x : y) +#endif + +#ifndef M_PI +#define M_PI 3.14159265358979323846264338328 +#endif + +typedef struct s_binomial_t { + int has_binomial; /* !=0: following parameters initialized for binomial */ + double psave; + RAND_INT_TYPE nsave; + double r; + double q; + double fm; + RAND_INT_TYPE m; + double p1; + double xm; + double xl; + double xr; + double c; + double laml; + double lamr; + double p2; + double p3; + double p4; +} binomial_t; + +DECLDIR float random_standard_uniform_f(bitgen_t *bitgen_state); +DECLDIR double random_standard_uniform(bitgen_t *bitgen_state); +DECLDIR void random_standard_uniform_fill(bitgen_t *, npy_intp, double *); +DECLDIR void random_standard_uniform_fill_f(bitgen_t *, npy_intp, float *); + +DECLDIR int64_t random_positive_int64(bitgen_t *bitgen_state); +DECLDIR int32_t random_positive_int32(bitgen_t *bitgen_state); +DECLDIR int64_t random_positive_int(bitgen_t *bitgen_state); +DECLDIR uint64_t random_uint(bitgen_t *bitgen_state); + +DECLDIR double random_standard_exponential(bitgen_t *bitgen_state); +DECLDIR float random_standard_exponential_f(bitgen_t *bitgen_state); +DECLDIR void random_standard_exponential_fill(bitgen_t *, npy_intp, double *); +DECLDIR void random_standard_exponential_fill_f(bitgen_t *, npy_intp, float *); +DECLDIR void random_standard_exponential_inv_fill(bitgen_t *, npy_intp, double *); +DECLDIR void random_standard_exponential_inv_fill_f(bitgen_t *, npy_intp, float *); + +DECLDIR double random_standard_normal(bitgen_t *bitgen_state); +DECLDIR float random_standard_normal_f(bitgen_t *bitgen_state); +DECLDIR void random_standard_normal_fill(bitgen_t *, npy_intp, double *); +DECLDIR void random_standard_normal_fill_f(bitgen_t *, npy_intp, float *); +DECLDIR double random_standard_gamma(bitgen_t *bitgen_state, double shape); +DECLDIR float random_standard_gamma_f(bitgen_t *bitgen_state, float shape); + +DECLDIR double random_normal(bitgen_t *bitgen_state, double loc, double scale); + +DECLDIR double random_gamma(bitgen_t *bitgen_state, double shape, double scale); +DECLDIR float random_gamma_f(bitgen_t *bitgen_state, float shape, float scale); + +DECLDIR double random_exponential(bitgen_t *bitgen_state, double scale); +DECLDIR double random_uniform(bitgen_t *bitgen_state, double lower, double range); +DECLDIR double random_beta(bitgen_t *bitgen_state, double a, double b); +DECLDIR double random_chisquare(bitgen_t *bitgen_state, double df); +DECLDIR double random_f(bitgen_t *bitgen_state, double dfnum, double dfden); +DECLDIR double random_standard_cauchy(bitgen_t *bitgen_state); +DECLDIR double random_pareto(bitgen_t *bitgen_state, double a); +DECLDIR double random_weibull(bitgen_t *bitgen_state, double a); +DECLDIR double random_power(bitgen_t *bitgen_state, double a); +DECLDIR double random_laplace(bitgen_t *bitgen_state, double loc, double scale); +DECLDIR double random_gumbel(bitgen_t *bitgen_state, double loc, double scale); +DECLDIR double random_logistic(bitgen_t *bitgen_state, double loc, double scale); +DECLDIR double random_lognormal(bitgen_t *bitgen_state, double mean, double sigma); +DECLDIR double random_rayleigh(bitgen_t *bitgen_state, double mode); +DECLDIR double random_standard_t(bitgen_t *bitgen_state, double df); +DECLDIR double random_noncentral_chisquare(bitgen_t *bitgen_state, double df, + double nonc); +DECLDIR double random_noncentral_f(bitgen_t *bitgen_state, double dfnum, + double dfden, double nonc); +DECLDIR double random_wald(bitgen_t *bitgen_state, double mean, double scale); +DECLDIR double random_vonmises(bitgen_t *bitgen_state, double mu, double kappa); +DECLDIR double random_triangular(bitgen_t *bitgen_state, double left, double mode, + double right); + +DECLDIR RAND_INT_TYPE random_poisson(bitgen_t *bitgen_state, double lam); +DECLDIR RAND_INT_TYPE random_negative_binomial(bitgen_t *bitgen_state, double n, + double p); + +DECLDIR int64_t random_binomial(bitgen_t *bitgen_state, double p, + int64_t n, binomial_t *binomial); + +DECLDIR int64_t random_logseries(bitgen_t *bitgen_state, double p); +DECLDIR int64_t random_geometric(bitgen_t *bitgen_state, double p); +DECLDIR RAND_INT_TYPE random_geometric_search(bitgen_t *bitgen_state, double p); +DECLDIR RAND_INT_TYPE random_zipf(bitgen_t *bitgen_state, double a); +DECLDIR int64_t random_hypergeometric(bitgen_t *bitgen_state, + int64_t good, int64_t bad, int64_t sample); +DECLDIR uint64_t random_interval(bitgen_t *bitgen_state, uint64_t max); + +/* Generate random uint64 numbers in closed interval [off, off + rng]. */ +DECLDIR uint64_t random_bounded_uint64(bitgen_t *bitgen_state, uint64_t off, + uint64_t rng, uint64_t mask, + bool use_masked); + +/* Generate random uint32 numbers in closed interval [off, off + rng]. */ +DECLDIR uint32_t random_buffered_bounded_uint32(bitgen_t *bitgen_state, + uint32_t off, uint32_t rng, + uint32_t mask, bool use_masked, + int *bcnt, uint32_t *buf); +DECLDIR uint16_t random_buffered_bounded_uint16(bitgen_t *bitgen_state, + uint16_t off, uint16_t rng, + uint16_t mask, bool use_masked, + int *bcnt, uint32_t *buf); +DECLDIR uint8_t random_buffered_bounded_uint8(bitgen_t *bitgen_state, uint8_t off, + uint8_t rng, uint8_t mask, + bool use_masked, int *bcnt, + uint32_t *buf); +DECLDIR npy_bool random_buffered_bounded_bool(bitgen_t *bitgen_state, npy_bool off, + npy_bool rng, npy_bool mask, + bool use_masked, int *bcnt, + uint32_t *buf); + +DECLDIR void random_bounded_uint64_fill(bitgen_t *bitgen_state, uint64_t off, + uint64_t rng, npy_intp cnt, + bool use_masked, uint64_t *out); +DECLDIR void random_bounded_uint32_fill(bitgen_t *bitgen_state, uint32_t off, + uint32_t rng, npy_intp cnt, + bool use_masked, uint32_t *out); +DECLDIR void random_bounded_uint16_fill(bitgen_t *bitgen_state, uint16_t off, + uint16_t rng, npy_intp cnt, + bool use_masked, uint16_t *out); +DECLDIR void random_bounded_uint8_fill(bitgen_t *bitgen_state, uint8_t off, + uint8_t rng, npy_intp cnt, + bool use_masked, uint8_t *out); +DECLDIR void random_bounded_bool_fill(bitgen_t *bitgen_state, npy_bool off, + npy_bool rng, npy_intp cnt, + bool use_masked, npy_bool *out); + +DECLDIR void random_multinomial(bitgen_t *bitgen_state, RAND_INT_TYPE n, RAND_INT_TYPE *mnix, + double *pix, npy_intp d, binomial_t *binomial); + +/* multivariate hypergeometric, "count" method */ +DECLDIR int random_multivariate_hypergeometric_count(bitgen_t *bitgen_state, + int64_t total, + size_t num_colors, int64_t *colors, + int64_t nsample, + size_t num_variates, int64_t *variates); + +/* multivariate hypergeometric, "marginals" method */ +DECLDIR void random_multivariate_hypergeometric_marginals(bitgen_t *bitgen_state, + int64_t total, + size_t num_colors, int64_t *colors, + int64_t nsample, + size_t num_variates, int64_t *variates); + +/* Common to legacy-distributions.c and distributions.c but not exported */ + +RAND_INT_TYPE random_binomial_btpe(bitgen_t *bitgen_state, + RAND_INT_TYPE n, + double p, + binomial_t *binomial); +RAND_INT_TYPE random_binomial_inversion(bitgen_t *bitgen_state, + RAND_INT_TYPE n, + double p, + binomial_t *binomial); +double random_loggam(double x); +static inline double next_double(bitgen_t *bitgen_state) { + return bitgen_state->next_double(bitgen_state->state); +} + +#ifdef __cplusplus +} +#endif + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_RANDOM_DISTRIBUTIONS_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/libdivide.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/libdivide.h new file mode 100644 index 0000000000000000000000000000000000000000..f4eb8039b50c21c0977a38ee5f47c8f89307d482 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/random/libdivide.h @@ -0,0 +1,2079 @@ +// libdivide.h - Optimized integer division +// https://libdivide.com +// +// Copyright (C) 2010 - 2019 ridiculous_fish, +// Copyright (C) 2016 - 2019 Kim Walisch, +// +// libdivide is dual-licensed under the Boost or zlib licenses. +// You may use libdivide under the terms of either of these. +// See LICENSE.txt for more details. + +#ifndef NUMPY_CORE_INCLUDE_NUMPY_LIBDIVIDE_LIBDIVIDE_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_LIBDIVIDE_LIBDIVIDE_H_ + +#define LIBDIVIDE_VERSION "3.0" +#define LIBDIVIDE_VERSION_MAJOR 3 +#define LIBDIVIDE_VERSION_MINOR 0 + +#include + +#if defined(__cplusplus) + #include + #include + #include +#else + #include + #include +#endif + +#if defined(LIBDIVIDE_AVX512) + #include +#elif defined(LIBDIVIDE_AVX2) + #include +#elif defined(LIBDIVIDE_SSE2) + #include +#endif + +#if defined(_MSC_VER) + #include + // disable warning C4146: unary minus operator applied + // to unsigned type, result still unsigned + #pragma warning(disable: 4146) + #define LIBDIVIDE_VC +#endif + +#if !defined(__has_builtin) + #define __has_builtin(x) 0 +#endif + +#if defined(__SIZEOF_INT128__) + #define HAS_INT128_T + // clang-cl on Windows does not yet support 128-bit division + #if !(defined(__clang__) && defined(LIBDIVIDE_VC)) + #define HAS_INT128_DIV + #endif +#endif + +#if defined(__x86_64__) || defined(_M_X64) + #define LIBDIVIDE_X86_64 +#endif + +#if defined(__i386__) + #define LIBDIVIDE_i386 +#endif + +#if defined(__GNUC__) || defined(__clang__) + #define LIBDIVIDE_GCC_STYLE_ASM +#endif + +#if defined(__cplusplus) || defined(LIBDIVIDE_VC) + #define LIBDIVIDE_FUNCTION __FUNCTION__ +#else + #define LIBDIVIDE_FUNCTION __func__ +#endif + +#define LIBDIVIDE_ERROR(msg) \ + do { \ + fprintf(stderr, "libdivide.h:%d: %s(): Error: %s\n", \ + __LINE__, LIBDIVIDE_FUNCTION, msg); \ + abort(); \ + } while (0) + +#if defined(LIBDIVIDE_ASSERTIONS_ON) + #define LIBDIVIDE_ASSERT(x) \ + do { \ + if (!(x)) { \ + fprintf(stderr, "libdivide.h:%d: %s(): Assertion failed: %s\n", \ + __LINE__, LIBDIVIDE_FUNCTION, #x); \ + abort(); \ + } \ + } while (0) +#else + #define LIBDIVIDE_ASSERT(x) +#endif + +#ifdef __cplusplus +namespace libdivide { +#endif + +// pack divider structs to prevent compilers from padding. +// This reduces memory usage by up to 43% when using a large +// array of libdivide dividers and improves performance +// by up to 10% because of reduced memory bandwidth. +#pragma pack(push, 1) + +struct libdivide_u32_t { + uint32_t magic; + uint8_t more; +}; + +struct libdivide_s32_t { + int32_t magic; + uint8_t more; +}; + +struct libdivide_u64_t { + uint64_t magic; + uint8_t more; +}; + +struct libdivide_s64_t { + int64_t magic; + uint8_t more; +}; + +struct libdivide_u32_branchfree_t { + uint32_t magic; + uint8_t more; +}; + +struct libdivide_s32_branchfree_t { + int32_t magic; + uint8_t more; +}; + +struct libdivide_u64_branchfree_t { + uint64_t magic; + uint8_t more; +}; + +struct libdivide_s64_branchfree_t { + int64_t magic; + uint8_t more; +}; + +#pragma pack(pop) + +// Explanation of the "more" field: +// +// * Bits 0-5 is the shift value (for shift path or mult path). +// * Bit 6 is the add indicator for mult path. +// * Bit 7 is set if the divisor is negative. We use bit 7 as the negative +// divisor indicator so that we can efficiently use sign extension to +// create a bitmask with all bits set to 1 (if the divisor is negative) +// or 0 (if the divisor is positive). +// +// u32: [0-4] shift value +// [5] ignored +// [6] add indicator +// magic number of 0 indicates shift path +// +// s32: [0-4] shift value +// [5] ignored +// [6] add indicator +// [7] indicates negative divisor +// magic number of 0 indicates shift path +// +// u64: [0-5] shift value +// [6] add indicator +// magic number of 0 indicates shift path +// +// s64: [0-5] shift value +// [6] add indicator +// [7] indicates negative divisor +// magic number of 0 indicates shift path +// +// In s32 and s64 branchfree modes, the magic number is negated according to +// whether the divisor is negated. In branchfree strategy, it is not negated. + +enum { + LIBDIVIDE_32_SHIFT_MASK = 0x1F, + LIBDIVIDE_64_SHIFT_MASK = 0x3F, + LIBDIVIDE_ADD_MARKER = 0x40, + LIBDIVIDE_NEGATIVE_DIVISOR = 0x80 +}; + +static inline struct libdivide_s32_t libdivide_s32_gen(int32_t d); +static inline struct libdivide_u32_t libdivide_u32_gen(uint32_t d); +static inline struct libdivide_s64_t libdivide_s64_gen(int64_t d); +static inline struct libdivide_u64_t libdivide_u64_gen(uint64_t d); + +static inline struct libdivide_s32_branchfree_t libdivide_s32_branchfree_gen(int32_t d); +static inline struct libdivide_u32_branchfree_t libdivide_u32_branchfree_gen(uint32_t d); +static inline struct libdivide_s64_branchfree_t libdivide_s64_branchfree_gen(int64_t d); +static inline struct libdivide_u64_branchfree_t libdivide_u64_branchfree_gen(uint64_t d); + +static inline int32_t libdivide_s32_do(int32_t numer, const struct libdivide_s32_t *denom); +static inline uint32_t libdivide_u32_do(uint32_t numer, const struct libdivide_u32_t *denom); +static inline int64_t libdivide_s64_do(int64_t numer, const struct libdivide_s64_t *denom); +static inline uint64_t libdivide_u64_do(uint64_t numer, const struct libdivide_u64_t *denom); + +static inline int32_t libdivide_s32_branchfree_do(int32_t numer, const struct libdivide_s32_branchfree_t *denom); +static inline uint32_t libdivide_u32_branchfree_do(uint32_t numer, const struct libdivide_u32_branchfree_t *denom); +static inline int64_t libdivide_s64_branchfree_do(int64_t numer, const struct libdivide_s64_branchfree_t *denom); +static inline uint64_t libdivide_u64_branchfree_do(uint64_t numer, const struct libdivide_u64_branchfree_t *denom); + +static inline int32_t libdivide_s32_recover(const struct libdivide_s32_t *denom); +static inline uint32_t libdivide_u32_recover(const struct libdivide_u32_t *denom); +static inline int64_t libdivide_s64_recover(const struct libdivide_s64_t *denom); +static inline uint64_t libdivide_u64_recover(const struct libdivide_u64_t *denom); + +static inline int32_t libdivide_s32_branchfree_recover(const struct libdivide_s32_branchfree_t *denom); +static inline uint32_t libdivide_u32_branchfree_recover(const struct libdivide_u32_branchfree_t *denom); +static inline int64_t libdivide_s64_branchfree_recover(const struct libdivide_s64_branchfree_t *denom); +static inline uint64_t libdivide_u64_branchfree_recover(const struct libdivide_u64_branchfree_t *denom); + +//////// Internal Utility Functions + +static inline uint32_t libdivide_mullhi_u32(uint32_t x, uint32_t y) { + uint64_t xl = x, yl = y; + uint64_t rl = xl * yl; + return (uint32_t)(rl >> 32); +} + +static inline int32_t libdivide_mullhi_s32(int32_t x, int32_t y) { + int64_t xl = x, yl = y; + int64_t rl = xl * yl; + // needs to be arithmetic shift + return (int32_t)(rl >> 32); +} + +static inline uint64_t libdivide_mullhi_u64(uint64_t x, uint64_t y) { +#if defined(LIBDIVIDE_VC) && \ + defined(LIBDIVIDE_X86_64) + return __umulh(x, y); +#elif defined(HAS_INT128_T) + __uint128_t xl = x, yl = y; + __uint128_t rl = xl * yl; + return (uint64_t)(rl >> 64); +#else + // full 128 bits are x0 * y0 + (x0 * y1 << 32) + (x1 * y0 << 32) + (x1 * y1 << 64) + uint32_t mask = 0xFFFFFFFF; + uint32_t x0 = (uint32_t)(x & mask); + uint32_t x1 = (uint32_t)(x >> 32); + uint32_t y0 = (uint32_t)(y & mask); + uint32_t y1 = (uint32_t)(y >> 32); + uint32_t x0y0_hi = libdivide_mullhi_u32(x0, y0); + uint64_t x0y1 = x0 * (uint64_t)y1; + uint64_t x1y0 = x1 * (uint64_t)y0; + uint64_t x1y1 = x1 * (uint64_t)y1; + uint64_t temp = x1y0 + x0y0_hi; + uint64_t temp_lo = temp & mask; + uint64_t temp_hi = temp >> 32; + + return x1y1 + temp_hi + ((temp_lo + x0y1) >> 32); +#endif +} + +static inline int64_t libdivide_mullhi_s64(int64_t x, int64_t y) { +#if defined(LIBDIVIDE_VC) && \ + defined(LIBDIVIDE_X86_64) + return __mulh(x, y); +#elif defined(HAS_INT128_T) + __int128_t xl = x, yl = y; + __int128_t rl = xl * yl; + return (int64_t)(rl >> 64); +#else + // full 128 bits are x0 * y0 + (x0 * y1 << 32) + (x1 * y0 << 32) + (x1 * y1 << 64) + uint32_t mask = 0xFFFFFFFF; + uint32_t x0 = (uint32_t)(x & mask); + uint32_t y0 = (uint32_t)(y & mask); + int32_t x1 = (int32_t)(x >> 32); + int32_t y1 = (int32_t)(y >> 32); + uint32_t x0y0_hi = libdivide_mullhi_u32(x0, y0); + int64_t t = x1 * (int64_t)y0 + x0y0_hi; + int64_t w1 = x0 * (int64_t)y1 + (t & mask); + + return x1 * (int64_t)y1 + (t >> 32) + (w1 >> 32); +#endif +} + +static inline int32_t libdivide_count_leading_zeros32(uint32_t val) { +#if defined(__GNUC__) || \ + __has_builtin(__builtin_clz) + // Fast way to count leading zeros + return __builtin_clz(val); +#elif defined(LIBDIVIDE_VC) + unsigned long result; + if (_BitScanReverse(&result, val)) { + return 31 - result; + } + return 0; +#else + if (val == 0) + return 32; + int32_t result = 8; + uint32_t hi = 0xFFU << 24; + while ((val & hi) == 0) { + hi >>= 8; + result += 8; + } + while (val & hi) { + result -= 1; + hi <<= 1; + } + return result; +#endif +} + +static inline int32_t libdivide_count_leading_zeros64(uint64_t val) { +#if defined(__GNUC__) || \ + __has_builtin(__builtin_clzll) + // Fast way to count leading zeros + return __builtin_clzll(val); +#elif defined(LIBDIVIDE_VC) && defined(_WIN64) + unsigned long result; + if (_BitScanReverse64(&result, val)) { + return 63 - result; + } + return 0; +#else + uint32_t hi = val >> 32; + uint32_t lo = val & 0xFFFFFFFF; + if (hi != 0) return libdivide_count_leading_zeros32(hi); + return 32 + libdivide_count_leading_zeros32(lo); +#endif +} + +// libdivide_64_div_32_to_32: divides a 64-bit uint {u1, u0} by a 32-bit +// uint {v}. The result must fit in 32 bits. +// Returns the quotient directly and the remainder in *r +static inline uint32_t libdivide_64_div_32_to_32(uint32_t u1, uint32_t u0, uint32_t v, uint32_t *r) { +#if (defined(LIBDIVIDE_i386) || defined(LIBDIVIDE_X86_64)) && \ + defined(LIBDIVIDE_GCC_STYLE_ASM) + uint32_t result; + __asm__("divl %[v]" + : "=a"(result), "=d"(*r) + : [v] "r"(v), "a"(u0), "d"(u1) + ); + return result; +#else + uint64_t n = ((uint64_t)u1 << 32) | u0; + uint32_t result = (uint32_t)(n / v); + *r = (uint32_t)(n - result * (uint64_t)v); + return result; +#endif +} + +// libdivide_128_div_64_to_64: divides a 128-bit uint {u1, u0} by a 64-bit +// uint {v}. The result must fit in 64 bits. +// Returns the quotient directly and the remainder in *r +static uint64_t libdivide_128_div_64_to_64(uint64_t u1, uint64_t u0, uint64_t v, uint64_t *r) { +#if defined(LIBDIVIDE_X86_64) && \ + defined(LIBDIVIDE_GCC_STYLE_ASM) + uint64_t result; + __asm__("divq %[v]" + : "=a"(result), "=d"(*r) + : [v] "r"(v), "a"(u0), "d"(u1) + ); + return result; +#elif defined(HAS_INT128_T) && \ + defined(HAS_INT128_DIV) + __uint128_t n = ((__uint128_t)u1 << 64) | u0; + uint64_t result = (uint64_t)(n / v); + *r = (uint64_t)(n - result * (__uint128_t)v); + return result; +#else + // Code taken from Hacker's Delight: + // http://www.hackersdelight.org/HDcode/divlu.c. + // License permits inclusion here per: + // http://www.hackersdelight.org/permissions.htm + + const uint64_t b = (1ULL << 32); // Number base (32 bits) + uint64_t un1, un0; // Norm. dividend LSD's + uint64_t vn1, vn0; // Norm. divisor digits + uint64_t q1, q0; // Quotient digits + uint64_t un64, un21, un10; // Dividend digit pairs + uint64_t rhat; // A remainder + int32_t s; // Shift amount for norm + + // If overflow, set rem. to an impossible value, + // and return the largest possible quotient + if (u1 >= v) { + *r = (uint64_t) -1; + return (uint64_t) -1; + } + + // count leading zeros + s = libdivide_count_leading_zeros64(v); + if (s > 0) { + // Normalize divisor + v = v << s; + un64 = (u1 << s) | (u0 >> (64 - s)); + un10 = u0 << s; // Shift dividend left + } else { + // Avoid undefined behavior of (u0 >> 64). + // The behavior is undefined if the right operand is + // negative, or greater than or equal to the length + // in bits of the promoted left operand. + un64 = u1; + un10 = u0; + } + + // Break divisor up into two 32-bit digits + vn1 = v >> 32; + vn0 = v & 0xFFFFFFFF; + + // Break right half of dividend into two digits + un1 = un10 >> 32; + un0 = un10 & 0xFFFFFFFF; + + // Compute the first quotient digit, q1 + q1 = un64 / vn1; + rhat = un64 - q1 * vn1; + + while (q1 >= b || q1 * vn0 > b * rhat + un1) { + q1 = q1 - 1; + rhat = rhat + vn1; + if (rhat >= b) + break; + } + + // Multiply and subtract + un21 = un64 * b + un1 - q1 * v; + + // Compute the second quotient digit + q0 = un21 / vn1; + rhat = un21 - q0 * vn1; + + while (q0 >= b || q0 * vn0 > b * rhat + un0) { + q0 = q0 - 1; + rhat = rhat + vn1; + if (rhat >= b) + break; + } + + *r = (un21 * b + un0 - q0 * v) >> s; + return q1 * b + q0; +#endif +} + +// Bitshift a u128 in place, left (signed_shift > 0) or right (signed_shift < 0) +static inline void libdivide_u128_shift(uint64_t *u1, uint64_t *u0, int32_t signed_shift) { + if (signed_shift > 0) { + uint32_t shift = signed_shift; + *u1 <<= shift; + *u1 |= *u0 >> (64 - shift); + *u0 <<= shift; + } + else if (signed_shift < 0) { + uint32_t shift = -signed_shift; + *u0 >>= shift; + *u0 |= *u1 << (64 - shift); + *u1 >>= shift; + } +} + +// Computes a 128 / 128 -> 64 bit division, with a 128 bit remainder. +static uint64_t libdivide_128_div_128_to_64(uint64_t u_hi, uint64_t u_lo, uint64_t v_hi, uint64_t v_lo, uint64_t *r_hi, uint64_t *r_lo) { +#if defined(HAS_INT128_T) && \ + defined(HAS_INT128_DIV) + __uint128_t ufull = u_hi; + __uint128_t vfull = v_hi; + ufull = (ufull << 64) | u_lo; + vfull = (vfull << 64) | v_lo; + uint64_t res = (uint64_t)(ufull / vfull); + __uint128_t remainder = ufull - (vfull * res); + *r_lo = (uint64_t)remainder; + *r_hi = (uint64_t)(remainder >> 64); + return res; +#else + // Adapted from "Unsigned Doubleword Division" in Hacker's Delight + // We want to compute u / v + typedef struct { uint64_t hi; uint64_t lo; } u128_t; + u128_t u = {u_hi, u_lo}; + u128_t v = {v_hi, v_lo}; + + if (v.hi == 0) { + // divisor v is a 64 bit value, so we just need one 128/64 division + // Note that we are simpler than Hacker's Delight here, because we know + // the quotient fits in 64 bits whereas Hacker's Delight demands a full + // 128 bit quotient + *r_hi = 0; + return libdivide_128_div_64_to_64(u.hi, u.lo, v.lo, r_lo); + } + // Here v >= 2**64 + // We know that v.hi != 0, so count leading zeros is OK + // We have 0 <= n <= 63 + uint32_t n = libdivide_count_leading_zeros64(v.hi); + + // Normalize the divisor so its MSB is 1 + u128_t v1t = v; + libdivide_u128_shift(&v1t.hi, &v1t.lo, n); + uint64_t v1 = v1t.hi; // i.e. v1 = v1t >> 64 + + // To ensure no overflow + u128_t u1 = u; + libdivide_u128_shift(&u1.hi, &u1.lo, -1); + + // Get quotient from divide unsigned insn. + uint64_t rem_ignored; + uint64_t q1 = libdivide_128_div_64_to_64(u1.hi, u1.lo, v1, &rem_ignored); + + // Undo normalization and division of u by 2. + u128_t q0 = {0, q1}; + libdivide_u128_shift(&q0.hi, &q0.lo, n); + libdivide_u128_shift(&q0.hi, &q0.lo, -63); + + // Make q0 correct or too small by 1 + // Equivalent to `if (q0 != 0) q0 = q0 - 1;` + if (q0.hi != 0 || q0.lo != 0) { + q0.hi -= (q0.lo == 0); // borrow + q0.lo -= 1; + } + + // Now q0 is correct. + // Compute q0 * v as q0v + // = (q0.hi << 64 + q0.lo) * (v.hi << 64 + v.lo) + // = (q0.hi * v.hi << 128) + (q0.hi * v.lo << 64) + + // (q0.lo * v.hi << 64) + q0.lo * v.lo) + // Each term is 128 bit + // High half of full product (upper 128 bits!) are dropped + u128_t q0v = {0, 0}; + q0v.hi = q0.hi*v.lo + q0.lo*v.hi + libdivide_mullhi_u64(q0.lo, v.lo); + q0v.lo = q0.lo*v.lo; + + // Compute u - q0v as u_q0v + // This is the remainder + u128_t u_q0v = u; + u_q0v.hi -= q0v.hi + (u.lo < q0v.lo); // second term is borrow + u_q0v.lo -= q0v.lo; + + // Check if u_q0v >= v + // This checks if our remainder is larger than the divisor + if ((u_q0v.hi > v.hi) || + (u_q0v.hi == v.hi && u_q0v.lo >= v.lo)) { + // Increment q0 + q0.lo += 1; + q0.hi += (q0.lo == 0); // carry + + // Subtract v from remainder + u_q0v.hi -= v.hi + (u_q0v.lo < v.lo); + u_q0v.lo -= v.lo; + } + + *r_hi = u_q0v.hi; + *r_lo = u_q0v.lo; + + LIBDIVIDE_ASSERT(q0.hi == 0); + return q0.lo; +#endif +} + +////////// UINT32 + +static inline struct libdivide_u32_t libdivide_internal_u32_gen(uint32_t d, int branchfree) { + if (d == 0) { + LIBDIVIDE_ERROR("divider must be != 0"); + } + + struct libdivide_u32_t result; + uint32_t floor_log_2_d = 31 - libdivide_count_leading_zeros32(d); + + // Power of 2 + if ((d & (d - 1)) == 0) { + // We need to subtract 1 from the shift value in case of an unsigned + // branchfree divider because there is a hardcoded right shift by 1 + // in its division algorithm. Because of this we also need to add back + // 1 in its recovery algorithm. + result.magic = 0; + result.more = (uint8_t)(floor_log_2_d - (branchfree != 0)); + } else { + uint8_t more; + uint32_t rem, proposed_m; + proposed_m = libdivide_64_div_32_to_32(1U << floor_log_2_d, 0, d, &rem); + + LIBDIVIDE_ASSERT(rem > 0 && rem < d); + const uint32_t e = d - rem; + + // This power works if e < 2**floor_log_2_d. + if (!branchfree && (e < (1U << floor_log_2_d))) { + // This power works + more = floor_log_2_d; + } else { + // We have to use the general 33-bit algorithm. We need to compute + // (2**power) / d. However, we already have (2**(power-1))/d and + // its remainder. By doubling both, and then correcting the + // remainder, we can compute the larger division. + // don't care about overflow here - in fact, we expect it + proposed_m += proposed_m; + const uint32_t twice_rem = rem + rem; + if (twice_rem >= d || twice_rem < rem) proposed_m += 1; + more = floor_log_2_d | LIBDIVIDE_ADD_MARKER; + } + result.magic = 1 + proposed_m; + result.more = more; + // result.more's shift should in general be ceil_log_2_d. But if we + // used the smaller power, we subtract one from the shift because we're + // using the smaller power. If we're using the larger power, we + // subtract one from the shift because it's taken care of by the add + // indicator. So floor_log_2_d happens to be correct in both cases. + } + return result; +} + +struct libdivide_u32_t libdivide_u32_gen(uint32_t d) { + return libdivide_internal_u32_gen(d, 0); +} + +struct libdivide_u32_branchfree_t libdivide_u32_branchfree_gen(uint32_t d) { + if (d == 1) { + LIBDIVIDE_ERROR("branchfree divider must be != 1"); + } + struct libdivide_u32_t tmp = libdivide_internal_u32_gen(d, 1); + struct libdivide_u32_branchfree_t ret = {tmp.magic, (uint8_t)(tmp.more & LIBDIVIDE_32_SHIFT_MASK)}; + return ret; +} + +uint32_t libdivide_u32_do(uint32_t numer, const struct libdivide_u32_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + return numer >> more; + } + else { + uint32_t q = libdivide_mullhi_u32(denom->magic, numer); + if (more & LIBDIVIDE_ADD_MARKER) { + uint32_t t = ((numer - q) >> 1) + q; + return t >> (more & LIBDIVIDE_32_SHIFT_MASK); + } + else { + // All upper bits are 0, + // don't need to mask them off. + return q >> more; + } + } +} + +uint32_t libdivide_u32_branchfree_do(uint32_t numer, const struct libdivide_u32_branchfree_t *denom) { + uint32_t q = libdivide_mullhi_u32(denom->magic, numer); + uint32_t t = ((numer - q) >> 1) + q; + return t >> denom->more; +} + +uint32_t libdivide_u32_recover(const struct libdivide_u32_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + + if (!denom->magic) { + return 1U << shift; + } else if (!(more & LIBDIVIDE_ADD_MARKER)) { + // We compute q = n/d = n*m / 2^(32 + shift) + // Therefore we have d = 2^(32 + shift) / m + // We need to ceil it. + // We know d is not a power of 2, so m is not a power of 2, + // so we can just add 1 to the floor + uint32_t hi_dividend = 1U << shift; + uint32_t rem_ignored; + return 1 + libdivide_64_div_32_to_32(hi_dividend, 0, denom->magic, &rem_ignored); + } else { + // Here we wish to compute d = 2^(32+shift+1)/(m+2^32). + // Notice (m + 2^32) is a 33 bit number. Use 64 bit division for now + // Also note that shift may be as high as 31, so shift + 1 will + // overflow. So we have to compute it as 2^(32+shift)/(m+2^32), and + // then double the quotient and remainder. + uint64_t half_n = 1ULL << (32 + shift); + uint64_t d = (1ULL << 32) | denom->magic; + // Note that the quotient is guaranteed <= 32 bits, but the remainder + // may need 33! + uint32_t half_q = (uint32_t)(half_n / d); + uint64_t rem = half_n % d; + // We computed 2^(32+shift)/(m+2^32) + // Need to double it, and then add 1 to the quotient if doubling th + // remainder would increase the quotient. + // Note that rem<<1 cannot overflow, since rem < d and d is 33 bits + uint32_t full_q = half_q + half_q + ((rem<<1) >= d); + + // We rounded down in gen (hence +1) + return full_q + 1; + } +} + +uint32_t libdivide_u32_branchfree_recover(const struct libdivide_u32_branchfree_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + + if (!denom->magic) { + return 1U << (shift + 1); + } else { + // Here we wish to compute d = 2^(32+shift+1)/(m+2^32). + // Notice (m + 2^32) is a 33 bit number. Use 64 bit division for now + // Also note that shift may be as high as 31, so shift + 1 will + // overflow. So we have to compute it as 2^(32+shift)/(m+2^32), and + // then double the quotient and remainder. + uint64_t half_n = 1ULL << (32 + shift); + uint64_t d = (1ULL << 32) | denom->magic; + // Note that the quotient is guaranteed <= 32 bits, but the remainder + // may need 33! + uint32_t half_q = (uint32_t)(half_n / d); + uint64_t rem = half_n % d; + // We computed 2^(32+shift)/(m+2^32) + // Need to double it, and then add 1 to the quotient if doubling th + // remainder would increase the quotient. + // Note that rem<<1 cannot overflow, since rem < d and d is 33 bits + uint32_t full_q = half_q + half_q + ((rem<<1) >= d); + + // We rounded down in gen (hence +1) + return full_q + 1; + } +} + +/////////// UINT64 + +static inline struct libdivide_u64_t libdivide_internal_u64_gen(uint64_t d, int branchfree) { + if (d == 0) { + LIBDIVIDE_ERROR("divider must be != 0"); + } + + struct libdivide_u64_t result; + uint32_t floor_log_2_d = 63 - libdivide_count_leading_zeros64(d); + + // Power of 2 + if ((d & (d - 1)) == 0) { + // We need to subtract 1 from the shift value in case of an unsigned + // branchfree divider because there is a hardcoded right shift by 1 + // in its division algorithm. Because of this we also need to add back + // 1 in its recovery algorithm. + result.magic = 0; + result.more = (uint8_t)(floor_log_2_d - (branchfree != 0)); + } else { + uint64_t proposed_m, rem; + uint8_t more; + // (1 << (64 + floor_log_2_d)) / d + proposed_m = libdivide_128_div_64_to_64(1ULL << floor_log_2_d, 0, d, &rem); + + LIBDIVIDE_ASSERT(rem > 0 && rem < d); + const uint64_t e = d - rem; + + // This power works if e < 2**floor_log_2_d. + if (!branchfree && e < (1ULL << floor_log_2_d)) { + // This power works + more = floor_log_2_d; + } else { + // We have to use the general 65-bit algorithm. We need to compute + // (2**power) / d. However, we already have (2**(power-1))/d and + // its remainder. By doubling both, and then correcting the + // remainder, we can compute the larger division. + // don't care about overflow here - in fact, we expect it + proposed_m += proposed_m; + const uint64_t twice_rem = rem + rem; + if (twice_rem >= d || twice_rem < rem) proposed_m += 1; + more = floor_log_2_d | LIBDIVIDE_ADD_MARKER; + } + result.magic = 1 + proposed_m; + result.more = more; + // result.more's shift should in general be ceil_log_2_d. But if we + // used the smaller power, we subtract one from the shift because we're + // using the smaller power. If we're using the larger power, we + // subtract one from the shift because it's taken care of by the add + // indicator. So floor_log_2_d happens to be correct in both cases, + // which is why we do it outside of the if statement. + } + return result; +} + +struct libdivide_u64_t libdivide_u64_gen(uint64_t d) { + return libdivide_internal_u64_gen(d, 0); +} + +struct libdivide_u64_branchfree_t libdivide_u64_branchfree_gen(uint64_t d) { + if (d == 1) { + LIBDIVIDE_ERROR("branchfree divider must be != 1"); + } + struct libdivide_u64_t tmp = libdivide_internal_u64_gen(d, 1); + struct libdivide_u64_branchfree_t ret = {tmp.magic, (uint8_t)(tmp.more & LIBDIVIDE_64_SHIFT_MASK)}; + return ret; +} + +uint64_t libdivide_u64_do(uint64_t numer, const struct libdivide_u64_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + return numer >> more; + } + else { + uint64_t q = libdivide_mullhi_u64(denom->magic, numer); + if (more & LIBDIVIDE_ADD_MARKER) { + uint64_t t = ((numer - q) >> 1) + q; + return t >> (more & LIBDIVIDE_64_SHIFT_MASK); + } + else { + // All upper bits are 0, + // don't need to mask them off. + return q >> more; + } + } +} + +uint64_t libdivide_u64_branchfree_do(uint64_t numer, const struct libdivide_u64_branchfree_t *denom) { + uint64_t q = libdivide_mullhi_u64(denom->magic, numer); + uint64_t t = ((numer - q) >> 1) + q; + return t >> denom->more; +} + +uint64_t libdivide_u64_recover(const struct libdivide_u64_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + + if (!denom->magic) { + return 1ULL << shift; + } else if (!(more & LIBDIVIDE_ADD_MARKER)) { + // We compute q = n/d = n*m / 2^(64 + shift) + // Therefore we have d = 2^(64 + shift) / m + // We need to ceil it. + // We know d is not a power of 2, so m is not a power of 2, + // so we can just add 1 to the floor + uint64_t hi_dividend = 1ULL << shift; + uint64_t rem_ignored; + return 1 + libdivide_128_div_64_to_64(hi_dividend, 0, denom->magic, &rem_ignored); + } else { + // Here we wish to compute d = 2^(64+shift+1)/(m+2^64). + // Notice (m + 2^64) is a 65 bit number. This gets hairy. See + // libdivide_u32_recover for more on what we do here. + // TODO: do something better than 128 bit math + + // Full n is a (potentially) 129 bit value + // half_n is a 128 bit value + // Compute the hi half of half_n. Low half is 0. + uint64_t half_n_hi = 1ULL << shift, half_n_lo = 0; + // d is a 65 bit value. The high bit is always set to 1. + const uint64_t d_hi = 1, d_lo = denom->magic; + // Note that the quotient is guaranteed <= 64 bits, + // but the remainder may need 65! + uint64_t r_hi, r_lo; + uint64_t half_q = libdivide_128_div_128_to_64(half_n_hi, half_n_lo, d_hi, d_lo, &r_hi, &r_lo); + // We computed 2^(64+shift)/(m+2^64) + // Double the remainder ('dr') and check if that is larger than d + // Note that d is a 65 bit value, so r1 is small and so r1 + r1 + // cannot overflow + uint64_t dr_lo = r_lo + r_lo; + uint64_t dr_hi = r_hi + r_hi + (dr_lo < r_lo); // last term is carry + int dr_exceeds_d = (dr_hi > d_hi) || (dr_hi == d_hi && dr_lo >= d_lo); + uint64_t full_q = half_q + half_q + (dr_exceeds_d ? 1 : 0); + return full_q + 1; + } +} + +uint64_t libdivide_u64_branchfree_recover(const struct libdivide_u64_branchfree_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + + if (!denom->magic) { + return 1ULL << (shift + 1); + } else { + // Here we wish to compute d = 2^(64+shift+1)/(m+2^64). + // Notice (m + 2^64) is a 65 bit number. This gets hairy. See + // libdivide_u32_recover for more on what we do here. + // TODO: do something better than 128 bit math + + // Full n is a (potentially) 129 bit value + // half_n is a 128 bit value + // Compute the hi half of half_n. Low half is 0. + uint64_t half_n_hi = 1ULL << shift, half_n_lo = 0; + // d is a 65 bit value. The high bit is always set to 1. + const uint64_t d_hi = 1, d_lo = denom->magic; + // Note that the quotient is guaranteed <= 64 bits, + // but the remainder may need 65! + uint64_t r_hi, r_lo; + uint64_t half_q = libdivide_128_div_128_to_64(half_n_hi, half_n_lo, d_hi, d_lo, &r_hi, &r_lo); + // We computed 2^(64+shift)/(m+2^64) + // Double the remainder ('dr') and check if that is larger than d + // Note that d is a 65 bit value, so r1 is small and so r1 + r1 + // cannot overflow + uint64_t dr_lo = r_lo + r_lo; + uint64_t dr_hi = r_hi + r_hi + (dr_lo < r_lo); // last term is carry + int dr_exceeds_d = (dr_hi > d_hi) || (dr_hi == d_hi && dr_lo >= d_lo); + uint64_t full_q = half_q + half_q + (dr_exceeds_d ? 1 : 0); + return full_q + 1; + } +} + +/////////// SINT32 + +static inline struct libdivide_s32_t libdivide_internal_s32_gen(int32_t d, int branchfree) { + if (d == 0) { + LIBDIVIDE_ERROR("divider must be != 0"); + } + + struct libdivide_s32_t result; + + // If d is a power of 2, or negative a power of 2, we have to use a shift. + // This is especially important because the magic algorithm fails for -1. + // To check if d is a power of 2 or its inverse, it suffices to check + // whether its absolute value has exactly one bit set. This works even for + // INT_MIN, because abs(INT_MIN) == INT_MIN, and INT_MIN has one bit set + // and is a power of 2. + uint32_t ud = (uint32_t)d; + uint32_t absD = (d < 0) ? -ud : ud; + uint32_t floor_log_2_d = 31 - libdivide_count_leading_zeros32(absD); + // check if exactly one bit is set, + // don't care if absD is 0 since that's divide by zero + if ((absD & (absD - 1)) == 0) { + // Branchfree and normal paths are exactly the same + result.magic = 0; + result.more = floor_log_2_d | (d < 0 ? LIBDIVIDE_NEGATIVE_DIVISOR : 0); + } else { + LIBDIVIDE_ASSERT(floor_log_2_d >= 1); + + uint8_t more; + // the dividend here is 2**(floor_log_2_d + 31), so the low 32 bit word + // is 0 and the high word is floor_log_2_d - 1 + uint32_t rem, proposed_m; + proposed_m = libdivide_64_div_32_to_32(1U << (floor_log_2_d - 1), 0, absD, &rem); + const uint32_t e = absD - rem; + + // We are going to start with a power of floor_log_2_d - 1. + // This works if works if e < 2**floor_log_2_d. + if (!branchfree && e < (1U << floor_log_2_d)) { + // This power works + more = floor_log_2_d - 1; + } else { + // We need to go one higher. This should not make proposed_m + // overflow, but it will make it negative when interpreted as an + // int32_t. + proposed_m += proposed_m; + const uint32_t twice_rem = rem + rem; + if (twice_rem >= absD || twice_rem < rem) proposed_m += 1; + more = floor_log_2_d | LIBDIVIDE_ADD_MARKER; + } + + proposed_m += 1; + int32_t magic = (int32_t)proposed_m; + + // Mark if we are negative. Note we only negate the magic number in the + // branchfull case. + if (d < 0) { + more |= LIBDIVIDE_NEGATIVE_DIVISOR; + if (!branchfree) { + magic = -magic; + } + } + + result.more = more; + result.magic = magic; + } + return result; +} + +struct libdivide_s32_t libdivide_s32_gen(int32_t d) { + return libdivide_internal_s32_gen(d, 0); +} + +struct libdivide_s32_branchfree_t libdivide_s32_branchfree_gen(int32_t d) { + struct libdivide_s32_t tmp = libdivide_internal_s32_gen(d, 1); + struct libdivide_s32_branchfree_t result = {tmp.magic, tmp.more}; + return result; +} + +int32_t libdivide_s32_do(int32_t numer, const struct libdivide_s32_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + + if (!denom->magic) { + uint32_t sign = (int8_t)more >> 7; + uint32_t mask = (1U << shift) - 1; + uint32_t uq = numer + ((numer >> 31) & mask); + int32_t q = (int32_t)uq; + q >>= shift; + q = (q ^ sign) - sign; + return q; + } else { + uint32_t uq = (uint32_t)libdivide_mullhi_s32(denom->magic, numer); + if (more & LIBDIVIDE_ADD_MARKER) { + // must be arithmetic shift and then sign extend + int32_t sign = (int8_t)more >> 7; + // q += (more < 0 ? -numer : numer) + // cast required to avoid UB + uq += ((uint32_t)numer ^ sign) - sign; + } + int32_t q = (int32_t)uq; + q >>= shift; + q += (q < 0); + return q; + } +} + +int32_t libdivide_s32_branchfree_do(int32_t numer, const struct libdivide_s32_branchfree_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + // must be arithmetic shift and then sign extend + int32_t sign = (int8_t)more >> 7; + int32_t magic = denom->magic; + int32_t q = libdivide_mullhi_s32(magic, numer); + q += numer; + + // If q is non-negative, we have nothing to do + // If q is negative, we want to add either (2**shift)-1 if d is a power of + // 2, or (2**shift) if it is not a power of 2 + uint32_t is_power_of_2 = (magic == 0); + uint32_t q_sign = (uint32_t)(q >> 31); + q += q_sign & ((1U << shift) - is_power_of_2); + + // Now arithmetic right shift + q >>= shift; + // Negate if needed + q = (q ^ sign) - sign; + + return q; +} + +int32_t libdivide_s32_recover(const struct libdivide_s32_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + if (!denom->magic) { + uint32_t absD = 1U << shift; + if (more & LIBDIVIDE_NEGATIVE_DIVISOR) { + absD = -absD; + } + return (int32_t)absD; + } else { + // Unsigned math is much easier + // We negate the magic number only in the branchfull case, and we don't + // know which case we're in. However we have enough information to + // determine the correct sign of the magic number. The divisor was + // negative if LIBDIVIDE_NEGATIVE_DIVISOR is set. If ADD_MARKER is set, + // the magic number's sign is opposite that of the divisor. + // We want to compute the positive magic number. + int negative_divisor = (more & LIBDIVIDE_NEGATIVE_DIVISOR); + int magic_was_negated = (more & LIBDIVIDE_ADD_MARKER) + ? denom->magic > 0 : denom->magic < 0; + + // Handle the power of 2 case (including branchfree) + if (denom->magic == 0) { + int32_t result = 1U << shift; + return negative_divisor ? -result : result; + } + + uint32_t d = (uint32_t)(magic_was_negated ? -denom->magic : denom->magic); + uint64_t n = 1ULL << (32 + shift); // this shift cannot exceed 30 + uint32_t q = (uint32_t)(n / d); + int32_t result = (int32_t)q; + result += 1; + return negative_divisor ? -result : result; + } +} + +int32_t libdivide_s32_branchfree_recover(const struct libdivide_s32_branchfree_t *denom) { + return libdivide_s32_recover((const struct libdivide_s32_t *)denom); +} + +///////////// SINT64 + +static inline struct libdivide_s64_t libdivide_internal_s64_gen(int64_t d, int branchfree) { + if (d == 0) { + LIBDIVIDE_ERROR("divider must be != 0"); + } + + struct libdivide_s64_t result; + + // If d is a power of 2, or negative a power of 2, we have to use a shift. + // This is especially important because the magic algorithm fails for -1. + // To check if d is a power of 2 or its inverse, it suffices to check + // whether its absolute value has exactly one bit set. This works even for + // INT_MIN, because abs(INT_MIN) == INT_MIN, and INT_MIN has one bit set + // and is a power of 2. + uint64_t ud = (uint64_t)d; + uint64_t absD = (d < 0) ? -ud : ud; + uint32_t floor_log_2_d = 63 - libdivide_count_leading_zeros64(absD); + // check if exactly one bit is set, + // don't care if absD is 0 since that's divide by zero + if ((absD & (absD - 1)) == 0) { + // Branchfree and non-branchfree cases are the same + result.magic = 0; + result.more = floor_log_2_d | (d < 0 ? LIBDIVIDE_NEGATIVE_DIVISOR : 0); + } else { + // the dividend here is 2**(floor_log_2_d + 63), so the low 64 bit word + // is 0 and the high word is floor_log_2_d - 1 + uint8_t more; + uint64_t rem, proposed_m; + proposed_m = libdivide_128_div_64_to_64(1ULL << (floor_log_2_d - 1), 0, absD, &rem); + const uint64_t e = absD - rem; + + // We are going to start with a power of floor_log_2_d - 1. + // This works if works if e < 2**floor_log_2_d. + if (!branchfree && e < (1ULL << floor_log_2_d)) { + // This power works + more = floor_log_2_d - 1; + } else { + // We need to go one higher. This should not make proposed_m + // overflow, but it will make it negative when interpreted as an + // int32_t. + proposed_m += proposed_m; + const uint64_t twice_rem = rem + rem; + if (twice_rem >= absD || twice_rem < rem) proposed_m += 1; + // note that we only set the LIBDIVIDE_NEGATIVE_DIVISOR bit if we + // also set ADD_MARKER this is an annoying optimization that + // enables algorithm #4 to avoid the mask. However we always set it + // in the branchfree case + more = floor_log_2_d | LIBDIVIDE_ADD_MARKER; + } + proposed_m += 1; + int64_t magic = (int64_t)proposed_m; + + // Mark if we are negative + if (d < 0) { + more |= LIBDIVIDE_NEGATIVE_DIVISOR; + if (!branchfree) { + magic = -magic; + } + } + + result.more = more; + result.magic = magic; + } + return result; +} + +struct libdivide_s64_t libdivide_s64_gen(int64_t d) { + return libdivide_internal_s64_gen(d, 0); +} + +struct libdivide_s64_branchfree_t libdivide_s64_branchfree_gen(int64_t d) { + struct libdivide_s64_t tmp = libdivide_internal_s64_gen(d, 1); + struct libdivide_s64_branchfree_t ret = {tmp.magic, tmp.more}; + return ret; +} + +int64_t libdivide_s64_do(int64_t numer, const struct libdivide_s64_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + + if (!denom->magic) { // shift path + uint64_t mask = (1ULL << shift) - 1; + uint64_t uq = numer + ((numer >> 63) & mask); + int64_t q = (int64_t)uq; + q >>= shift; + // must be arithmetic shift and then sign-extend + int64_t sign = (int8_t)more >> 7; + q = (q ^ sign) - sign; + return q; + } else { + uint64_t uq = (uint64_t)libdivide_mullhi_s64(denom->magic, numer); + if (more & LIBDIVIDE_ADD_MARKER) { + // must be arithmetic shift and then sign extend + int64_t sign = (int8_t)more >> 7; + // q += (more < 0 ? -numer : numer) + // cast required to avoid UB + uq += ((uint64_t)numer ^ sign) - sign; + } + int64_t q = (int64_t)uq; + q >>= shift; + q += (q < 0); + return q; + } +} + +int64_t libdivide_s64_branchfree_do(int64_t numer, const struct libdivide_s64_branchfree_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + // must be arithmetic shift and then sign extend + int64_t sign = (int8_t)more >> 7; + int64_t magic = denom->magic; + int64_t q = libdivide_mullhi_s64(magic, numer); + q += numer; + + // If q is non-negative, we have nothing to do. + // If q is negative, we want to add either (2**shift)-1 if d is a power of + // 2, or (2**shift) if it is not a power of 2. + uint64_t is_power_of_2 = (magic == 0); + uint64_t q_sign = (uint64_t)(q >> 63); + q += q_sign & ((1ULL << shift) - is_power_of_2); + + // Arithmetic right shift + q >>= shift; + // Negate if needed + q = (q ^ sign) - sign; + + return q; +} + +int64_t libdivide_s64_recover(const struct libdivide_s64_t *denom) { + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + if (denom->magic == 0) { // shift path + uint64_t absD = 1ULL << shift; + if (more & LIBDIVIDE_NEGATIVE_DIVISOR) { + absD = -absD; + } + return (int64_t)absD; + } else { + // Unsigned math is much easier + int negative_divisor = (more & LIBDIVIDE_NEGATIVE_DIVISOR); + int magic_was_negated = (more & LIBDIVIDE_ADD_MARKER) + ? denom->magic > 0 : denom->magic < 0; + + uint64_t d = (uint64_t)(magic_was_negated ? -denom->magic : denom->magic); + uint64_t n_hi = 1ULL << shift, n_lo = 0; + uint64_t rem_ignored; + uint64_t q = libdivide_128_div_64_to_64(n_hi, n_lo, d, &rem_ignored); + int64_t result = (int64_t)(q + 1); + if (negative_divisor) { + result = -result; + } + return result; + } +} + +int64_t libdivide_s64_branchfree_recover(const struct libdivide_s64_branchfree_t *denom) { + return libdivide_s64_recover((const struct libdivide_s64_t *)denom); +} + +#if defined(LIBDIVIDE_AVX512) + +static inline __m512i libdivide_u32_do_vector(__m512i numers, const struct libdivide_u32_t *denom); +static inline __m512i libdivide_s32_do_vector(__m512i numers, const struct libdivide_s32_t *denom); +static inline __m512i libdivide_u64_do_vector(__m512i numers, const struct libdivide_u64_t *denom); +static inline __m512i libdivide_s64_do_vector(__m512i numers, const struct libdivide_s64_t *denom); + +static inline __m512i libdivide_u32_branchfree_do_vector(__m512i numers, const struct libdivide_u32_branchfree_t *denom); +static inline __m512i libdivide_s32_branchfree_do_vector(__m512i numers, const struct libdivide_s32_branchfree_t *denom); +static inline __m512i libdivide_u64_branchfree_do_vector(__m512i numers, const struct libdivide_u64_branchfree_t *denom); +static inline __m512i libdivide_s64_branchfree_do_vector(__m512i numers, const struct libdivide_s64_branchfree_t *denom); + +//////// Internal Utility Functions + +static inline __m512i libdivide_s64_signbits(__m512i v) {; + return _mm512_srai_epi64(v, 63); +} + +static inline __m512i libdivide_s64_shift_right_vector(__m512i v, int amt) { + return _mm512_srai_epi64(v, amt); +} + +// Here, b is assumed to contain one 32-bit value repeated. +static inline __m512i libdivide_mullhi_u32_vector(__m512i a, __m512i b) { + __m512i hi_product_0Z2Z = _mm512_srli_epi64(_mm512_mul_epu32(a, b), 32); + __m512i a1X3X = _mm512_srli_epi64(a, 32); + __m512i mask = _mm512_set_epi32(-1, 0, -1, 0, -1, 0, -1, 0, -1, 0, -1, 0, -1, 0, -1, 0); + __m512i hi_product_Z1Z3 = _mm512_and_si512(_mm512_mul_epu32(a1X3X, b), mask); + return _mm512_or_si512(hi_product_0Z2Z, hi_product_Z1Z3); +} + +// b is one 32-bit value repeated. +static inline __m512i libdivide_mullhi_s32_vector(__m512i a, __m512i b) { + __m512i hi_product_0Z2Z = _mm512_srli_epi64(_mm512_mul_epi32(a, b), 32); + __m512i a1X3X = _mm512_srli_epi64(a, 32); + __m512i mask = _mm512_set_epi32(-1, 0, -1, 0, -1, 0, -1, 0, -1, 0, -1, 0, -1, 0, -1, 0); + __m512i hi_product_Z1Z3 = _mm512_and_si512(_mm512_mul_epi32(a1X3X, b), mask); + return _mm512_or_si512(hi_product_0Z2Z, hi_product_Z1Z3); +} + +// Here, y is assumed to contain one 64-bit value repeated. +// https://stackoverflow.com/a/28827013 +static inline __m512i libdivide_mullhi_u64_vector(__m512i x, __m512i y) { + __m512i lomask = _mm512_set1_epi64(0xffffffff); + __m512i xh = _mm512_shuffle_epi32(x, (_MM_PERM_ENUM) 0xB1); + __m512i yh = _mm512_shuffle_epi32(y, (_MM_PERM_ENUM) 0xB1); + __m512i w0 = _mm512_mul_epu32(x, y); + __m512i w1 = _mm512_mul_epu32(x, yh); + __m512i w2 = _mm512_mul_epu32(xh, y); + __m512i w3 = _mm512_mul_epu32(xh, yh); + __m512i w0h = _mm512_srli_epi64(w0, 32); + __m512i s1 = _mm512_add_epi64(w1, w0h); + __m512i s1l = _mm512_and_si512(s1, lomask); + __m512i s1h = _mm512_srli_epi64(s1, 32); + __m512i s2 = _mm512_add_epi64(w2, s1l); + __m512i s2h = _mm512_srli_epi64(s2, 32); + __m512i hi = _mm512_add_epi64(w3, s1h); + hi = _mm512_add_epi64(hi, s2h); + + return hi; +} + +// y is one 64-bit value repeated. +static inline __m512i libdivide_mullhi_s64_vector(__m512i x, __m512i y) { + __m512i p = libdivide_mullhi_u64_vector(x, y); + __m512i t1 = _mm512_and_si512(libdivide_s64_signbits(x), y); + __m512i t2 = _mm512_and_si512(libdivide_s64_signbits(y), x); + p = _mm512_sub_epi64(p, t1); + p = _mm512_sub_epi64(p, t2); + return p; +} + +////////// UINT32 + +__m512i libdivide_u32_do_vector(__m512i numers, const struct libdivide_u32_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + return _mm512_srli_epi32(numers, more); + } + else { + __m512i q = libdivide_mullhi_u32_vector(numers, _mm512_set1_epi32(denom->magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // uint32_t t = ((numer - q) >> 1) + q; + // return t >> denom->shift; + uint32_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + __m512i t = _mm512_add_epi32(_mm512_srli_epi32(_mm512_sub_epi32(numers, q), 1), q); + return _mm512_srli_epi32(t, shift); + } + else { + return _mm512_srli_epi32(q, more); + } + } +} + +__m512i libdivide_u32_branchfree_do_vector(__m512i numers, const struct libdivide_u32_branchfree_t *denom) { + __m512i q = libdivide_mullhi_u32_vector(numers, _mm512_set1_epi32(denom->magic)); + __m512i t = _mm512_add_epi32(_mm512_srli_epi32(_mm512_sub_epi32(numers, q), 1), q); + return _mm512_srli_epi32(t, denom->more); +} + +////////// UINT64 + +__m512i libdivide_u64_do_vector(__m512i numers, const struct libdivide_u64_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + return _mm512_srli_epi64(numers, more); + } + else { + __m512i q = libdivide_mullhi_u64_vector(numers, _mm512_set1_epi64(denom->magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // uint32_t t = ((numer - q) >> 1) + q; + // return t >> denom->shift; + uint32_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + __m512i t = _mm512_add_epi64(_mm512_srli_epi64(_mm512_sub_epi64(numers, q), 1), q); + return _mm512_srli_epi64(t, shift); + } + else { + return _mm512_srli_epi64(q, more); + } + } +} + +__m512i libdivide_u64_branchfree_do_vector(__m512i numers, const struct libdivide_u64_branchfree_t *denom) { + __m512i q = libdivide_mullhi_u64_vector(numers, _mm512_set1_epi64(denom->magic)); + __m512i t = _mm512_add_epi64(_mm512_srli_epi64(_mm512_sub_epi64(numers, q), 1), q); + return _mm512_srli_epi64(t, denom->more); +} + +////////// SINT32 + +__m512i libdivide_s32_do_vector(__m512i numers, const struct libdivide_s32_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + uint32_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + uint32_t mask = (1U << shift) - 1; + __m512i roundToZeroTweak = _mm512_set1_epi32(mask); + // q = numer + ((numer >> 31) & roundToZeroTweak); + __m512i q = _mm512_add_epi32(numers, _mm512_and_si512(_mm512_srai_epi32(numers, 31), roundToZeroTweak)); + q = _mm512_srai_epi32(q, shift); + __m512i sign = _mm512_set1_epi32((int8_t)more >> 7); + // q = (q ^ sign) - sign; + q = _mm512_sub_epi32(_mm512_xor_si512(q, sign), sign); + return q; + } + else { + __m512i q = libdivide_mullhi_s32_vector(numers, _mm512_set1_epi32(denom->magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // must be arithmetic shift + __m512i sign = _mm512_set1_epi32((int8_t)more >> 7); + // q += ((numer ^ sign) - sign); + q = _mm512_add_epi32(q, _mm512_sub_epi32(_mm512_xor_si512(numers, sign), sign)); + } + // q >>= shift + q = _mm512_srai_epi32(q, more & LIBDIVIDE_32_SHIFT_MASK); + q = _mm512_add_epi32(q, _mm512_srli_epi32(q, 31)); // q += (q < 0) + return q; + } +} + +__m512i libdivide_s32_branchfree_do_vector(__m512i numers, const struct libdivide_s32_branchfree_t *denom) { + int32_t magic = denom->magic; + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + // must be arithmetic shift + __m512i sign = _mm512_set1_epi32((int8_t)more >> 7); + __m512i q = libdivide_mullhi_s32_vector(numers, _mm512_set1_epi32(magic)); + q = _mm512_add_epi32(q, numers); // q += numers + + // If q is non-negative, we have nothing to do + // If q is negative, we want to add either (2**shift)-1 if d is + // a power of 2, or (2**shift) if it is not a power of 2 + uint32_t is_power_of_2 = (magic == 0); + __m512i q_sign = _mm512_srai_epi32(q, 31); // q_sign = q >> 31 + __m512i mask = _mm512_set1_epi32((1U << shift) - is_power_of_2); + q = _mm512_add_epi32(q, _mm512_and_si512(q_sign, mask)); // q = q + (q_sign & mask) + q = _mm512_srai_epi32(q, shift); // q >>= shift + q = _mm512_sub_epi32(_mm512_xor_si512(q, sign), sign); // q = (q ^ sign) - sign + return q; +} + +////////// SINT64 + +__m512i libdivide_s64_do_vector(__m512i numers, const struct libdivide_s64_t *denom) { + uint8_t more = denom->more; + int64_t magic = denom->magic; + if (magic == 0) { // shift path + uint32_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + uint64_t mask = (1ULL << shift) - 1; + __m512i roundToZeroTweak = _mm512_set1_epi64(mask); + // q = numer + ((numer >> 63) & roundToZeroTweak); + __m512i q = _mm512_add_epi64(numers, _mm512_and_si512(libdivide_s64_signbits(numers), roundToZeroTweak)); + q = libdivide_s64_shift_right_vector(q, shift); + __m512i sign = _mm512_set1_epi32((int8_t)more >> 7); + // q = (q ^ sign) - sign; + q = _mm512_sub_epi64(_mm512_xor_si512(q, sign), sign); + return q; + } + else { + __m512i q = libdivide_mullhi_s64_vector(numers, _mm512_set1_epi64(magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // must be arithmetic shift + __m512i sign = _mm512_set1_epi32((int8_t)more >> 7); + // q += ((numer ^ sign) - sign); + q = _mm512_add_epi64(q, _mm512_sub_epi64(_mm512_xor_si512(numers, sign), sign)); + } + // q >>= denom->mult_path.shift + q = libdivide_s64_shift_right_vector(q, more & LIBDIVIDE_64_SHIFT_MASK); + q = _mm512_add_epi64(q, _mm512_srli_epi64(q, 63)); // q += (q < 0) + return q; + } +} + +__m512i libdivide_s64_branchfree_do_vector(__m512i numers, const struct libdivide_s64_branchfree_t *denom) { + int64_t magic = denom->magic; + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + // must be arithmetic shift + __m512i sign = _mm512_set1_epi32((int8_t)more >> 7); + + // libdivide_mullhi_s64(numers, magic); + __m512i q = libdivide_mullhi_s64_vector(numers, _mm512_set1_epi64(magic)); + q = _mm512_add_epi64(q, numers); // q += numers + + // If q is non-negative, we have nothing to do. + // If q is negative, we want to add either (2**shift)-1 if d is + // a power of 2, or (2**shift) if it is not a power of 2. + uint32_t is_power_of_2 = (magic == 0); + __m512i q_sign = libdivide_s64_signbits(q); // q_sign = q >> 63 + __m512i mask = _mm512_set1_epi64((1ULL << shift) - is_power_of_2); + q = _mm512_add_epi64(q, _mm512_and_si512(q_sign, mask)); // q = q + (q_sign & mask) + q = libdivide_s64_shift_right_vector(q, shift); // q >>= shift + q = _mm512_sub_epi64(_mm512_xor_si512(q, sign), sign); // q = (q ^ sign) - sign + return q; +} + +#elif defined(LIBDIVIDE_AVX2) + +static inline __m256i libdivide_u32_do_vector(__m256i numers, const struct libdivide_u32_t *denom); +static inline __m256i libdivide_s32_do_vector(__m256i numers, const struct libdivide_s32_t *denom); +static inline __m256i libdivide_u64_do_vector(__m256i numers, const struct libdivide_u64_t *denom); +static inline __m256i libdivide_s64_do_vector(__m256i numers, const struct libdivide_s64_t *denom); + +static inline __m256i libdivide_u32_branchfree_do_vector(__m256i numers, const struct libdivide_u32_branchfree_t *denom); +static inline __m256i libdivide_s32_branchfree_do_vector(__m256i numers, const struct libdivide_s32_branchfree_t *denom); +static inline __m256i libdivide_u64_branchfree_do_vector(__m256i numers, const struct libdivide_u64_branchfree_t *denom); +static inline __m256i libdivide_s64_branchfree_do_vector(__m256i numers, const struct libdivide_s64_branchfree_t *denom); + +//////// Internal Utility Functions + +// Implementation of _mm256_srai_epi64(v, 63) (from AVX512). +static inline __m256i libdivide_s64_signbits(__m256i v) { + __m256i hiBitsDuped = _mm256_shuffle_epi32(v, _MM_SHUFFLE(3, 3, 1, 1)); + __m256i signBits = _mm256_srai_epi32(hiBitsDuped, 31); + return signBits; +} + +// Implementation of _mm256_srai_epi64 (from AVX512). +static inline __m256i libdivide_s64_shift_right_vector(__m256i v, int amt) { + const int b = 64 - amt; + __m256i m = _mm256_set1_epi64x(1ULL << (b - 1)); + __m256i x = _mm256_srli_epi64(v, amt); + __m256i result = _mm256_sub_epi64(_mm256_xor_si256(x, m), m); + return result; +} + +// Here, b is assumed to contain one 32-bit value repeated. +static inline __m256i libdivide_mullhi_u32_vector(__m256i a, __m256i b) { + __m256i hi_product_0Z2Z = _mm256_srli_epi64(_mm256_mul_epu32(a, b), 32); + __m256i a1X3X = _mm256_srli_epi64(a, 32); + __m256i mask = _mm256_set_epi32(-1, 0, -1, 0, -1, 0, -1, 0); + __m256i hi_product_Z1Z3 = _mm256_and_si256(_mm256_mul_epu32(a1X3X, b), mask); + return _mm256_or_si256(hi_product_0Z2Z, hi_product_Z1Z3); +} + +// b is one 32-bit value repeated. +static inline __m256i libdivide_mullhi_s32_vector(__m256i a, __m256i b) { + __m256i hi_product_0Z2Z = _mm256_srli_epi64(_mm256_mul_epi32(a, b), 32); + __m256i a1X3X = _mm256_srli_epi64(a, 32); + __m256i mask = _mm256_set_epi32(-1, 0, -1, 0, -1, 0, -1, 0); + __m256i hi_product_Z1Z3 = _mm256_and_si256(_mm256_mul_epi32(a1X3X, b), mask); + return _mm256_or_si256(hi_product_0Z2Z, hi_product_Z1Z3); +} + +// Here, y is assumed to contain one 64-bit value repeated. +// https://stackoverflow.com/a/28827013 +static inline __m256i libdivide_mullhi_u64_vector(__m256i x, __m256i y) { + __m256i lomask = _mm256_set1_epi64x(0xffffffff); + __m256i xh = _mm256_shuffle_epi32(x, 0xB1); // x0l, x0h, x1l, x1h + __m256i yh = _mm256_shuffle_epi32(y, 0xB1); // y0l, y0h, y1l, y1h + __m256i w0 = _mm256_mul_epu32(x, y); // x0l*y0l, x1l*y1l + __m256i w1 = _mm256_mul_epu32(x, yh); // x0l*y0h, x1l*y1h + __m256i w2 = _mm256_mul_epu32(xh, y); // x0h*y0l, x1h*y0l + __m256i w3 = _mm256_mul_epu32(xh, yh); // x0h*y0h, x1h*y1h + __m256i w0h = _mm256_srli_epi64(w0, 32); + __m256i s1 = _mm256_add_epi64(w1, w0h); + __m256i s1l = _mm256_and_si256(s1, lomask); + __m256i s1h = _mm256_srli_epi64(s1, 32); + __m256i s2 = _mm256_add_epi64(w2, s1l); + __m256i s2h = _mm256_srli_epi64(s2, 32); + __m256i hi = _mm256_add_epi64(w3, s1h); + hi = _mm256_add_epi64(hi, s2h); + + return hi; +} + +// y is one 64-bit value repeated. +static inline __m256i libdivide_mullhi_s64_vector(__m256i x, __m256i y) { + __m256i p = libdivide_mullhi_u64_vector(x, y); + __m256i t1 = _mm256_and_si256(libdivide_s64_signbits(x), y); + __m256i t2 = _mm256_and_si256(libdivide_s64_signbits(y), x); + p = _mm256_sub_epi64(p, t1); + p = _mm256_sub_epi64(p, t2); + return p; +} + +////////// UINT32 + +__m256i libdivide_u32_do_vector(__m256i numers, const struct libdivide_u32_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + return _mm256_srli_epi32(numers, more); + } + else { + __m256i q = libdivide_mullhi_u32_vector(numers, _mm256_set1_epi32(denom->magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // uint32_t t = ((numer - q) >> 1) + q; + // return t >> denom->shift; + uint32_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + __m256i t = _mm256_add_epi32(_mm256_srli_epi32(_mm256_sub_epi32(numers, q), 1), q); + return _mm256_srli_epi32(t, shift); + } + else { + return _mm256_srli_epi32(q, more); + } + } +} + +__m256i libdivide_u32_branchfree_do_vector(__m256i numers, const struct libdivide_u32_branchfree_t *denom) { + __m256i q = libdivide_mullhi_u32_vector(numers, _mm256_set1_epi32(denom->magic)); + __m256i t = _mm256_add_epi32(_mm256_srli_epi32(_mm256_sub_epi32(numers, q), 1), q); + return _mm256_srli_epi32(t, denom->more); +} + +////////// UINT64 + +__m256i libdivide_u64_do_vector(__m256i numers, const struct libdivide_u64_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + return _mm256_srli_epi64(numers, more); + } + else { + __m256i q = libdivide_mullhi_u64_vector(numers, _mm256_set1_epi64x(denom->magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // uint32_t t = ((numer - q) >> 1) + q; + // return t >> denom->shift; + uint32_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + __m256i t = _mm256_add_epi64(_mm256_srli_epi64(_mm256_sub_epi64(numers, q), 1), q); + return _mm256_srli_epi64(t, shift); + } + else { + return _mm256_srli_epi64(q, more); + } + } +} + +__m256i libdivide_u64_branchfree_do_vector(__m256i numers, const struct libdivide_u64_branchfree_t *denom) { + __m256i q = libdivide_mullhi_u64_vector(numers, _mm256_set1_epi64x(denom->magic)); + __m256i t = _mm256_add_epi64(_mm256_srli_epi64(_mm256_sub_epi64(numers, q), 1), q); + return _mm256_srli_epi64(t, denom->more); +} + +////////// SINT32 + +__m256i libdivide_s32_do_vector(__m256i numers, const struct libdivide_s32_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + uint32_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + uint32_t mask = (1U << shift) - 1; + __m256i roundToZeroTweak = _mm256_set1_epi32(mask); + // q = numer + ((numer >> 31) & roundToZeroTweak); + __m256i q = _mm256_add_epi32(numers, _mm256_and_si256(_mm256_srai_epi32(numers, 31), roundToZeroTweak)); + q = _mm256_srai_epi32(q, shift); + __m256i sign = _mm256_set1_epi32((int8_t)more >> 7); + // q = (q ^ sign) - sign; + q = _mm256_sub_epi32(_mm256_xor_si256(q, sign), sign); + return q; + } + else { + __m256i q = libdivide_mullhi_s32_vector(numers, _mm256_set1_epi32(denom->magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // must be arithmetic shift + __m256i sign = _mm256_set1_epi32((int8_t)more >> 7); + // q += ((numer ^ sign) - sign); + q = _mm256_add_epi32(q, _mm256_sub_epi32(_mm256_xor_si256(numers, sign), sign)); + } + // q >>= shift + q = _mm256_srai_epi32(q, more & LIBDIVIDE_32_SHIFT_MASK); + q = _mm256_add_epi32(q, _mm256_srli_epi32(q, 31)); // q += (q < 0) + return q; + } +} + +__m256i libdivide_s32_branchfree_do_vector(__m256i numers, const struct libdivide_s32_branchfree_t *denom) { + int32_t magic = denom->magic; + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + // must be arithmetic shift + __m256i sign = _mm256_set1_epi32((int8_t)more >> 7); + __m256i q = libdivide_mullhi_s32_vector(numers, _mm256_set1_epi32(magic)); + q = _mm256_add_epi32(q, numers); // q += numers + + // If q is non-negative, we have nothing to do + // If q is negative, we want to add either (2**shift)-1 if d is + // a power of 2, or (2**shift) if it is not a power of 2 + uint32_t is_power_of_2 = (magic == 0); + __m256i q_sign = _mm256_srai_epi32(q, 31); // q_sign = q >> 31 + __m256i mask = _mm256_set1_epi32((1U << shift) - is_power_of_2); + q = _mm256_add_epi32(q, _mm256_and_si256(q_sign, mask)); // q = q + (q_sign & mask) + q = _mm256_srai_epi32(q, shift); // q >>= shift + q = _mm256_sub_epi32(_mm256_xor_si256(q, sign), sign); // q = (q ^ sign) - sign + return q; +} + +////////// SINT64 + +__m256i libdivide_s64_do_vector(__m256i numers, const struct libdivide_s64_t *denom) { + uint8_t more = denom->more; + int64_t magic = denom->magic; + if (magic == 0) { // shift path + uint32_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + uint64_t mask = (1ULL << shift) - 1; + __m256i roundToZeroTweak = _mm256_set1_epi64x(mask); + // q = numer + ((numer >> 63) & roundToZeroTweak); + __m256i q = _mm256_add_epi64(numers, _mm256_and_si256(libdivide_s64_signbits(numers), roundToZeroTweak)); + q = libdivide_s64_shift_right_vector(q, shift); + __m256i sign = _mm256_set1_epi32((int8_t)more >> 7); + // q = (q ^ sign) - sign; + q = _mm256_sub_epi64(_mm256_xor_si256(q, sign), sign); + return q; + } + else { + __m256i q = libdivide_mullhi_s64_vector(numers, _mm256_set1_epi64x(magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // must be arithmetic shift + __m256i sign = _mm256_set1_epi32((int8_t)more >> 7); + // q += ((numer ^ sign) - sign); + q = _mm256_add_epi64(q, _mm256_sub_epi64(_mm256_xor_si256(numers, sign), sign)); + } + // q >>= denom->mult_path.shift + q = libdivide_s64_shift_right_vector(q, more & LIBDIVIDE_64_SHIFT_MASK); + q = _mm256_add_epi64(q, _mm256_srli_epi64(q, 63)); // q += (q < 0) + return q; + } +} + +__m256i libdivide_s64_branchfree_do_vector(__m256i numers, const struct libdivide_s64_branchfree_t *denom) { + int64_t magic = denom->magic; + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + // must be arithmetic shift + __m256i sign = _mm256_set1_epi32((int8_t)more >> 7); + + // libdivide_mullhi_s64(numers, magic); + __m256i q = libdivide_mullhi_s64_vector(numers, _mm256_set1_epi64x(magic)); + q = _mm256_add_epi64(q, numers); // q += numers + + // If q is non-negative, we have nothing to do. + // If q is negative, we want to add either (2**shift)-1 if d is + // a power of 2, or (2**shift) if it is not a power of 2. + uint32_t is_power_of_2 = (magic == 0); + __m256i q_sign = libdivide_s64_signbits(q); // q_sign = q >> 63 + __m256i mask = _mm256_set1_epi64x((1ULL << shift) - is_power_of_2); + q = _mm256_add_epi64(q, _mm256_and_si256(q_sign, mask)); // q = q + (q_sign & mask) + q = libdivide_s64_shift_right_vector(q, shift); // q >>= shift + q = _mm256_sub_epi64(_mm256_xor_si256(q, sign), sign); // q = (q ^ sign) - sign + return q; +} + +#elif defined(LIBDIVIDE_SSE2) + +static inline __m128i libdivide_u32_do_vector(__m128i numers, const struct libdivide_u32_t *denom); +static inline __m128i libdivide_s32_do_vector(__m128i numers, const struct libdivide_s32_t *denom); +static inline __m128i libdivide_u64_do_vector(__m128i numers, const struct libdivide_u64_t *denom); +static inline __m128i libdivide_s64_do_vector(__m128i numers, const struct libdivide_s64_t *denom); + +static inline __m128i libdivide_u32_branchfree_do_vector(__m128i numers, const struct libdivide_u32_branchfree_t *denom); +static inline __m128i libdivide_s32_branchfree_do_vector(__m128i numers, const struct libdivide_s32_branchfree_t *denom); +static inline __m128i libdivide_u64_branchfree_do_vector(__m128i numers, const struct libdivide_u64_branchfree_t *denom); +static inline __m128i libdivide_s64_branchfree_do_vector(__m128i numers, const struct libdivide_s64_branchfree_t *denom); + +//////// Internal Utility Functions + +// Implementation of _mm_srai_epi64(v, 63) (from AVX512). +static inline __m128i libdivide_s64_signbits(__m128i v) { + __m128i hiBitsDuped = _mm_shuffle_epi32(v, _MM_SHUFFLE(3, 3, 1, 1)); + __m128i signBits = _mm_srai_epi32(hiBitsDuped, 31); + return signBits; +} + +// Implementation of _mm_srai_epi64 (from AVX512). +static inline __m128i libdivide_s64_shift_right_vector(__m128i v, int amt) { + const int b = 64 - amt; + __m128i m = _mm_set1_epi64x(1ULL << (b - 1)); + __m128i x = _mm_srli_epi64(v, amt); + __m128i result = _mm_sub_epi64(_mm_xor_si128(x, m), m); + return result; +} + +// Here, b is assumed to contain one 32-bit value repeated. +static inline __m128i libdivide_mullhi_u32_vector(__m128i a, __m128i b) { + __m128i hi_product_0Z2Z = _mm_srli_epi64(_mm_mul_epu32(a, b), 32); + __m128i a1X3X = _mm_srli_epi64(a, 32); + __m128i mask = _mm_set_epi32(-1, 0, -1, 0); + __m128i hi_product_Z1Z3 = _mm_and_si128(_mm_mul_epu32(a1X3X, b), mask); + return _mm_or_si128(hi_product_0Z2Z, hi_product_Z1Z3); +} + +// SSE2 does not have a signed multiplication instruction, but we can convert +// unsigned to signed pretty efficiently. Again, b is just a 32 bit value +// repeated four times. +static inline __m128i libdivide_mullhi_s32_vector(__m128i a, __m128i b) { + __m128i p = libdivide_mullhi_u32_vector(a, b); + // t1 = (a >> 31) & y, arithmetic shift + __m128i t1 = _mm_and_si128(_mm_srai_epi32(a, 31), b); + __m128i t2 = _mm_and_si128(_mm_srai_epi32(b, 31), a); + p = _mm_sub_epi32(p, t1); + p = _mm_sub_epi32(p, t2); + return p; +} + +// Here, y is assumed to contain one 64-bit value repeated. +// https://stackoverflow.com/a/28827013 +static inline __m128i libdivide_mullhi_u64_vector(__m128i x, __m128i y) { + __m128i lomask = _mm_set1_epi64x(0xffffffff); + __m128i xh = _mm_shuffle_epi32(x, 0xB1); // x0l, x0h, x1l, x1h + __m128i yh = _mm_shuffle_epi32(y, 0xB1); // y0l, y0h, y1l, y1h + __m128i w0 = _mm_mul_epu32(x, y); // x0l*y0l, x1l*y1l + __m128i w1 = _mm_mul_epu32(x, yh); // x0l*y0h, x1l*y1h + __m128i w2 = _mm_mul_epu32(xh, y); // x0h*y0l, x1h*y0l + __m128i w3 = _mm_mul_epu32(xh, yh); // x0h*y0h, x1h*y1h + __m128i w0h = _mm_srli_epi64(w0, 32); + __m128i s1 = _mm_add_epi64(w1, w0h); + __m128i s1l = _mm_and_si128(s1, lomask); + __m128i s1h = _mm_srli_epi64(s1, 32); + __m128i s2 = _mm_add_epi64(w2, s1l); + __m128i s2h = _mm_srli_epi64(s2, 32); + __m128i hi = _mm_add_epi64(w3, s1h); + hi = _mm_add_epi64(hi, s2h); + + return hi; +} + +// y is one 64-bit value repeated. +static inline __m128i libdivide_mullhi_s64_vector(__m128i x, __m128i y) { + __m128i p = libdivide_mullhi_u64_vector(x, y); + __m128i t1 = _mm_and_si128(libdivide_s64_signbits(x), y); + __m128i t2 = _mm_and_si128(libdivide_s64_signbits(y), x); + p = _mm_sub_epi64(p, t1); + p = _mm_sub_epi64(p, t2); + return p; +} + +////////// UINT32 + +__m128i libdivide_u32_do_vector(__m128i numers, const struct libdivide_u32_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + return _mm_srli_epi32(numers, more); + } + else { + __m128i q = libdivide_mullhi_u32_vector(numers, _mm_set1_epi32(denom->magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // uint32_t t = ((numer - q) >> 1) + q; + // return t >> denom->shift; + uint32_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + __m128i t = _mm_add_epi32(_mm_srli_epi32(_mm_sub_epi32(numers, q), 1), q); + return _mm_srli_epi32(t, shift); + } + else { + return _mm_srli_epi32(q, more); + } + } +} + +__m128i libdivide_u32_branchfree_do_vector(__m128i numers, const struct libdivide_u32_branchfree_t *denom) { + __m128i q = libdivide_mullhi_u32_vector(numers, _mm_set1_epi32(denom->magic)); + __m128i t = _mm_add_epi32(_mm_srli_epi32(_mm_sub_epi32(numers, q), 1), q); + return _mm_srli_epi32(t, denom->more); +} + +////////// UINT64 + +__m128i libdivide_u64_do_vector(__m128i numers, const struct libdivide_u64_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + return _mm_srli_epi64(numers, more); + } + else { + __m128i q = libdivide_mullhi_u64_vector(numers, _mm_set1_epi64x(denom->magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // uint32_t t = ((numer - q) >> 1) + q; + // return t >> denom->shift; + uint32_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + __m128i t = _mm_add_epi64(_mm_srli_epi64(_mm_sub_epi64(numers, q), 1), q); + return _mm_srli_epi64(t, shift); + } + else { + return _mm_srli_epi64(q, more); + } + } +} + +__m128i libdivide_u64_branchfree_do_vector(__m128i numers, const struct libdivide_u64_branchfree_t *denom) { + __m128i q = libdivide_mullhi_u64_vector(numers, _mm_set1_epi64x(denom->magic)); + __m128i t = _mm_add_epi64(_mm_srli_epi64(_mm_sub_epi64(numers, q), 1), q); + return _mm_srli_epi64(t, denom->more); +} + +////////// SINT32 + +__m128i libdivide_s32_do_vector(__m128i numers, const struct libdivide_s32_t *denom) { + uint8_t more = denom->more; + if (!denom->magic) { + uint32_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + uint32_t mask = (1U << shift) - 1; + __m128i roundToZeroTweak = _mm_set1_epi32(mask); + // q = numer + ((numer >> 31) & roundToZeroTweak); + __m128i q = _mm_add_epi32(numers, _mm_and_si128(_mm_srai_epi32(numers, 31), roundToZeroTweak)); + q = _mm_srai_epi32(q, shift); + __m128i sign = _mm_set1_epi32((int8_t)more >> 7); + // q = (q ^ sign) - sign; + q = _mm_sub_epi32(_mm_xor_si128(q, sign), sign); + return q; + } + else { + __m128i q = libdivide_mullhi_s32_vector(numers, _mm_set1_epi32(denom->magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // must be arithmetic shift + __m128i sign = _mm_set1_epi32((int8_t)more >> 7); + // q += ((numer ^ sign) - sign); + q = _mm_add_epi32(q, _mm_sub_epi32(_mm_xor_si128(numers, sign), sign)); + } + // q >>= shift + q = _mm_srai_epi32(q, more & LIBDIVIDE_32_SHIFT_MASK); + q = _mm_add_epi32(q, _mm_srli_epi32(q, 31)); // q += (q < 0) + return q; + } +} + +__m128i libdivide_s32_branchfree_do_vector(__m128i numers, const struct libdivide_s32_branchfree_t *denom) { + int32_t magic = denom->magic; + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_32_SHIFT_MASK; + // must be arithmetic shift + __m128i sign = _mm_set1_epi32((int8_t)more >> 7); + __m128i q = libdivide_mullhi_s32_vector(numers, _mm_set1_epi32(magic)); + q = _mm_add_epi32(q, numers); // q += numers + + // If q is non-negative, we have nothing to do + // If q is negative, we want to add either (2**shift)-1 if d is + // a power of 2, or (2**shift) if it is not a power of 2 + uint32_t is_power_of_2 = (magic == 0); + __m128i q_sign = _mm_srai_epi32(q, 31); // q_sign = q >> 31 + __m128i mask = _mm_set1_epi32((1U << shift) - is_power_of_2); + q = _mm_add_epi32(q, _mm_and_si128(q_sign, mask)); // q = q + (q_sign & mask) + q = _mm_srai_epi32(q, shift); // q >>= shift + q = _mm_sub_epi32(_mm_xor_si128(q, sign), sign); // q = (q ^ sign) - sign + return q; +} + +////////// SINT64 + +__m128i libdivide_s64_do_vector(__m128i numers, const struct libdivide_s64_t *denom) { + uint8_t more = denom->more; + int64_t magic = denom->magic; + if (magic == 0) { // shift path + uint32_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + uint64_t mask = (1ULL << shift) - 1; + __m128i roundToZeroTweak = _mm_set1_epi64x(mask); + // q = numer + ((numer >> 63) & roundToZeroTweak); + __m128i q = _mm_add_epi64(numers, _mm_and_si128(libdivide_s64_signbits(numers), roundToZeroTweak)); + q = libdivide_s64_shift_right_vector(q, shift); + __m128i sign = _mm_set1_epi32((int8_t)more >> 7); + // q = (q ^ sign) - sign; + q = _mm_sub_epi64(_mm_xor_si128(q, sign), sign); + return q; + } + else { + __m128i q = libdivide_mullhi_s64_vector(numers, _mm_set1_epi64x(magic)); + if (more & LIBDIVIDE_ADD_MARKER) { + // must be arithmetic shift + __m128i sign = _mm_set1_epi32((int8_t)more >> 7); + // q += ((numer ^ sign) - sign); + q = _mm_add_epi64(q, _mm_sub_epi64(_mm_xor_si128(numers, sign), sign)); + } + // q >>= denom->mult_path.shift + q = libdivide_s64_shift_right_vector(q, more & LIBDIVIDE_64_SHIFT_MASK); + q = _mm_add_epi64(q, _mm_srli_epi64(q, 63)); // q += (q < 0) + return q; + } +} + +__m128i libdivide_s64_branchfree_do_vector(__m128i numers, const struct libdivide_s64_branchfree_t *denom) { + int64_t magic = denom->magic; + uint8_t more = denom->more; + uint8_t shift = more & LIBDIVIDE_64_SHIFT_MASK; + // must be arithmetic shift + __m128i sign = _mm_set1_epi32((int8_t)more >> 7); + + // libdivide_mullhi_s64(numers, magic); + __m128i q = libdivide_mullhi_s64_vector(numers, _mm_set1_epi64x(magic)); + q = _mm_add_epi64(q, numers); // q += numers + + // If q is non-negative, we have nothing to do. + // If q is negative, we want to add either (2**shift)-1 if d is + // a power of 2, or (2**shift) if it is not a power of 2. + uint32_t is_power_of_2 = (magic == 0); + __m128i q_sign = libdivide_s64_signbits(q); // q_sign = q >> 63 + __m128i mask = _mm_set1_epi64x((1ULL << shift) - is_power_of_2); + q = _mm_add_epi64(q, _mm_and_si128(q_sign, mask)); // q = q + (q_sign & mask) + q = libdivide_s64_shift_right_vector(q, shift); // q >>= shift + q = _mm_sub_epi64(_mm_xor_si128(q, sign), sign); // q = (q ^ sign) - sign + return q; +} + +#endif + +/////////// C++ stuff + +#ifdef __cplusplus + +// The C++ divider class is templated on both an integer type +// (like uint64_t) and an algorithm type. +// * BRANCHFULL is the default algorithm type. +// * BRANCHFREE is the branchfree algorithm type. +enum { + BRANCHFULL, + BRANCHFREE +}; + +#if defined(LIBDIVIDE_AVX512) + #define LIBDIVIDE_VECTOR_TYPE __m512i +#elif defined(LIBDIVIDE_AVX2) + #define LIBDIVIDE_VECTOR_TYPE __m256i +#elif defined(LIBDIVIDE_SSE2) + #define LIBDIVIDE_VECTOR_TYPE __m128i +#endif + +#if !defined(LIBDIVIDE_VECTOR_TYPE) + #define LIBDIVIDE_DIVIDE_VECTOR(ALGO) +#else + #define LIBDIVIDE_DIVIDE_VECTOR(ALGO) \ + LIBDIVIDE_VECTOR_TYPE divide(LIBDIVIDE_VECTOR_TYPE n) const { \ + return libdivide_##ALGO##_do_vector(n, &denom); \ + } +#endif + +// The DISPATCHER_GEN() macro generates C++ methods (for the given integer +// and algorithm types) that redirect to libdivide's C API. +#define DISPATCHER_GEN(T, ALGO) \ + libdivide_##ALGO##_t denom; \ + dispatcher() { } \ + dispatcher(T d) \ + : denom(libdivide_##ALGO##_gen(d)) \ + { } \ + T divide(T n) const { \ + return libdivide_##ALGO##_do(n, &denom); \ + } \ + LIBDIVIDE_DIVIDE_VECTOR(ALGO) \ + T recover() const { \ + return libdivide_##ALGO##_recover(&denom); \ + } + +// The dispatcher selects a specific division algorithm for a given +// type and ALGO using partial template specialization. +template struct dispatcher { }; + +template<> struct dispatcher { DISPATCHER_GEN(int32_t, s32) }; +template<> struct dispatcher { DISPATCHER_GEN(int32_t, s32_branchfree) }; +template<> struct dispatcher { DISPATCHER_GEN(uint32_t, u32) }; +template<> struct dispatcher { DISPATCHER_GEN(uint32_t, u32_branchfree) }; +template<> struct dispatcher { DISPATCHER_GEN(int64_t, s64) }; +template<> struct dispatcher { DISPATCHER_GEN(int64_t, s64_branchfree) }; +template<> struct dispatcher { DISPATCHER_GEN(uint64_t, u64) }; +template<> struct dispatcher { DISPATCHER_GEN(uint64_t, u64_branchfree) }; + +// This is the main divider class for use by the user (C++ API). +// The actual division algorithm is selected using the dispatcher struct +// based on the integer and algorithm template parameters. +template +class divider { +public: + // We leave the default constructor empty so that creating + // an array of dividers and then initializing them + // later doesn't slow us down. + divider() { } + + // Constructor that takes the divisor as a parameter + divider(T d) : div(d) { } + + // Divides n by the divisor + T divide(T n) const { + return div.divide(n); + } + + // Recovers the divisor, returns the value that was + // used to initialize this divider object. + T recover() const { + return div.recover(); + } + + bool operator==(const divider& other) const { + return div.denom.magic == other.denom.magic && + div.denom.more == other.denom.more; + } + + bool operator!=(const divider& other) const { + return !(*this == other); + } + +#if defined(LIBDIVIDE_VECTOR_TYPE) + // Treats the vector as packed integer values with the same type as + // the divider (e.g. s32, u32, s64, u64) and divides each of + // them by the divider, returning the packed quotients. + LIBDIVIDE_VECTOR_TYPE divide(LIBDIVIDE_VECTOR_TYPE n) const { + return div.divide(n); + } +#endif + +private: + // Storage for the actual divisor + dispatcher::value, + std::is_signed::value, sizeof(T), ALGO> div; +}; + +// Overload of operator / for scalar division +template +T operator/(T n, const divider& div) { + return div.divide(n); +} + +// Overload of operator /= for scalar division +template +T& operator/=(T& n, const divider& div) { + n = div.divide(n); + return n; +} + +#if defined(LIBDIVIDE_VECTOR_TYPE) + // Overload of operator / for vector division + template + LIBDIVIDE_VECTOR_TYPE operator/(LIBDIVIDE_VECTOR_TYPE n, const divider& div) { + return div.divide(n); + } + // Overload of operator /= for vector division + template + LIBDIVIDE_VECTOR_TYPE& operator/=(LIBDIVIDE_VECTOR_TYPE& n, const divider& div) { + n = div.divide(n); + return n; + } +#endif + +// libdivdie::branchfree_divider +template +using branchfree_divider = divider; + +} // namespace libdivide + +#endif // __cplusplus + +#endif // NUMPY_CORE_INCLUDE_NUMPY_LIBDIVIDE_LIBDIVIDE_H_ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/ufuncobject.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/ufuncobject.h new file mode 100644 index 0000000000000000000000000000000000000000..dca375b32673396f42d5e6e1d2b30dea07928386 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/ufuncobject.h @@ -0,0 +1,306 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_UFUNCOBJECT_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_UFUNCOBJECT_H_ + +#include +#include + +#ifdef __cplusplus +extern "C" { +#endif + +/* + * The legacy generic inner loop for a standard element-wise or + * generalized ufunc. + */ +typedef void (*PyUFuncGenericFunction) + (char **args, + npy_intp const *dimensions, + npy_intp const *strides, + void *innerloopdata); + +/* + * The most generic one-dimensional inner loop for + * a masked standard element-wise ufunc. "Masked" here means that it skips + * doing calculations on any items for which the maskptr array has a true + * value. + */ +typedef void (PyUFunc_MaskedStridedInnerLoopFunc)( + char **dataptrs, npy_intp *strides, + char *maskptr, npy_intp mask_stride, + npy_intp count, + NpyAuxData *innerloopdata); + +/* Forward declaration for the type resolver and loop selector typedefs */ +struct _tagPyUFuncObject; + +/* + * Given the operands for calling a ufunc, should determine the + * calculation input and output data types and return an inner loop function. + * This function should validate that the casting rule is being followed, + * and fail if it is not. + * + * For backwards compatibility, the regular type resolution function does not + * support auxiliary data with object semantics. The type resolution call + * which returns a masked generic function returns a standard NpyAuxData + * object, for which the NPY_AUXDATA_FREE and NPY_AUXDATA_CLONE macros + * work. + * + * ufunc: The ufunc object. + * casting: The 'casting' parameter provided to the ufunc. + * operands: An array of length (ufunc->nin + ufunc->nout), + * with the output parameters possibly NULL. + * type_tup: Either NULL, or the type_tup passed to the ufunc. + * out_dtypes: An array which should be populated with new + * references to (ufunc->nin + ufunc->nout) new + * dtypes, one for each input and output. These + * dtypes should all be in native-endian format. + * + * Should return 0 on success, -1 on failure (with exception set), + * or -2 if Py_NotImplemented should be returned. + */ +typedef int (PyUFunc_TypeResolutionFunc)( + struct _tagPyUFuncObject *ufunc, + NPY_CASTING casting, + PyArrayObject **operands, + PyObject *type_tup, + PyArray_Descr **out_dtypes); + + +typedef struct _tagPyUFuncObject { + PyObject_HEAD + /* + * nin: Number of inputs + * nout: Number of outputs + * nargs: Always nin + nout (Why is it stored?) + */ + int nin, nout, nargs; + + /* + * Identity for reduction, any of PyUFunc_One, PyUFunc_Zero + * PyUFunc_MinusOne, PyUFunc_None, PyUFunc_ReorderableNone, + * PyUFunc_IdentityValue. + */ + int identity; + + /* Array of one-dimensional core loops */ + PyUFuncGenericFunction *functions; + /* Array of funcdata that gets passed into the functions */ + void *const *data; + /* The number of elements in 'functions' and 'data' */ + int ntypes; + + /* Used to be unused field 'check_return' */ + int reserved1; + + /* The name of the ufunc */ + const char *name; + + /* Array of type numbers, of size ('nargs' * 'ntypes') */ + const char *types; + + /* Documentation string */ + const char *doc; + + void *ptr; + PyObject *obj; + PyObject *userloops; + + /* generalized ufunc parameters */ + + /* 0 for scalar ufunc; 1 for generalized ufunc */ + int core_enabled; + /* number of distinct dimension names in signature */ + int core_num_dim_ix; + + /* + * dimension indices of input/output argument k are stored in + * core_dim_ixs[core_offsets[k]..core_offsets[k]+core_num_dims[k]-1] + */ + + /* numbers of core dimensions of each argument */ + int *core_num_dims; + /* + * dimension indices in a flatted form; indices + * are in the range of [0,core_num_dim_ix) + */ + int *core_dim_ixs; + /* + * positions of 1st core dimensions of each + * argument in core_dim_ixs, equivalent to cumsum(core_num_dims) + */ + int *core_offsets; + /* signature string for printing purpose */ + char *core_signature; + + /* + * A function which resolves the types and fills an array + * with the dtypes for the inputs and outputs. + */ + PyUFunc_TypeResolutionFunc *type_resolver; + /* Was the legacy loop resolver */ + void *reserved2; + /* + * This was blocked off to be the "new" inner loop selector in 1.7, + * but this was never implemented. (This is also why the above + * selector is called the "legacy" selector.) + */ + #ifndef Py_LIMITED_API + vectorcallfunc vectorcall; + #else + void *vectorcall; + #endif + + /* Was previously the `PyUFunc_MaskedInnerLoopSelectionFunc` */ + void *reserved3; + + /* + * List of flags for each operand when ufunc is called by nditer object. + * These flags will be used in addition to the default flags for each + * operand set by nditer object. + */ + npy_uint32 *op_flags; + + /* + * List of global flags used when ufunc is called by nditer object. + * These flags will be used in addition to the default global flags + * set by nditer object. + */ + npy_uint32 iter_flags; + + /* New in NPY_API_VERSION 0x0000000D and above */ + #if NPY_FEATURE_VERSION >= NPY_1_16_API_VERSION + /* + * for each core_num_dim_ix distinct dimension names, + * the possible "frozen" size (-1 if not frozen). + */ + npy_intp *core_dim_sizes; + + /* + * for each distinct core dimension, a set of UFUNC_CORE_DIM* flags + */ + npy_uint32 *core_dim_flags; + + /* Identity for reduction, when identity == PyUFunc_IdentityValue */ + PyObject *identity_value; + #endif /* NPY_FEATURE_VERSION >= NPY_1_16_API_VERSION */ + + /* New in NPY_API_VERSION 0x0000000F and above */ + #if NPY_FEATURE_VERSION >= NPY_1_22_API_VERSION + /* New private fields related to dispatching */ + void *_dispatch_cache; + /* A PyListObject of `(tuple of DTypes, ArrayMethod/Promoter)` */ + PyObject *_loops; + #endif +} PyUFuncObject; + +#include "arrayobject.h" +/* Generalized ufunc; 0x0001 reserved for possible use as CORE_ENABLED */ +/* the core dimension's size will be determined by the operands. */ +#define UFUNC_CORE_DIM_SIZE_INFERRED 0x0002 +/* the core dimension may be absent */ +#define UFUNC_CORE_DIM_CAN_IGNORE 0x0004 +/* flags inferred during execution */ +#define UFUNC_CORE_DIM_MISSING 0x00040000 + + +#define UFUNC_OBJ_ISOBJECT 1 +#define UFUNC_OBJ_NEEDS_API 2 + + +#if NPY_ALLOW_THREADS +#define NPY_LOOP_BEGIN_THREADS do {if (!(loop->obj & UFUNC_OBJ_NEEDS_API)) _save = PyEval_SaveThread();} while (0); +#define NPY_LOOP_END_THREADS do {if (!(loop->obj & UFUNC_OBJ_NEEDS_API)) PyEval_RestoreThread(_save);} while (0); +#else +#define NPY_LOOP_BEGIN_THREADS +#define NPY_LOOP_END_THREADS +#endif + +/* + * UFunc has unit of 0, and the order of operations can be reordered + * This case allows reduction with multiple axes at once. + */ +#define PyUFunc_Zero 0 +/* + * UFunc has unit of 1, and the order of operations can be reordered + * This case allows reduction with multiple axes at once. + */ +#define PyUFunc_One 1 +/* + * UFunc has unit of -1, and the order of operations can be reordered + * This case allows reduction with multiple axes at once. Intended for + * bitwise_and reduction. + */ +#define PyUFunc_MinusOne 2 +/* + * UFunc has no unit, and the order of operations cannot be reordered. + * This case does not allow reduction with multiple axes at once. + */ +#define PyUFunc_None -1 +/* + * UFunc has no unit, and the order of operations can be reordered + * This case allows reduction with multiple axes at once. + */ +#define PyUFunc_ReorderableNone -2 +/* + * UFunc unit is an identity_value, and the order of operations can be reordered + * This case allows reduction with multiple axes at once. + */ +#define PyUFunc_IdentityValue -3 + + +#define UFUNC_REDUCE 0 +#define UFUNC_ACCUMULATE 1 +#define UFUNC_REDUCEAT 2 +#define UFUNC_OUTER 3 + + +typedef struct { + int nin; + int nout; + PyObject *callable; +} PyUFunc_PyFuncData; + +/* A linked-list of function information for + user-defined 1-d loops. + */ +typedef struct _loop1d_info { + PyUFuncGenericFunction func; + void *data; + int *arg_types; + struct _loop1d_info *next; + int nargs; + PyArray_Descr **arg_dtypes; +} PyUFunc_Loop1d; + + +#define UFUNC_PYVALS_NAME "UFUNC_PYVALS" + +/* + * THESE MACROS ARE DEPRECATED. + * Use npy_set_floatstatus_* in the npymath library. + */ +#define UFUNC_FPE_DIVIDEBYZERO NPY_FPE_DIVIDEBYZERO +#define UFUNC_FPE_OVERFLOW NPY_FPE_OVERFLOW +#define UFUNC_FPE_UNDERFLOW NPY_FPE_UNDERFLOW +#define UFUNC_FPE_INVALID NPY_FPE_INVALID + +#define generate_divbyzero_error() npy_set_floatstatus_divbyzero() +#define generate_overflow_error() npy_set_floatstatus_overflow() + + /* Make sure it gets defined if it isn't already */ +#ifndef UFUNC_NOFPE +/* Clear the floating point exception default of Borland C++ */ +#if defined(__BORLANDC__) +#define UFUNC_NOFPE _control87(MCW_EM, MCW_EM); +#else +#define UFUNC_NOFPE +#endif +#endif + +#include "__ufunc_api.h" + +#ifdef __cplusplus +} +#endif + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_UFUNCOBJECT_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/utils.h b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/utils.h new file mode 100644 index 0000000000000000000000000000000000000000..97f06092e54050baf3c2fc4372429cbd110429e8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/include/numpy/utils.h @@ -0,0 +1,37 @@ +#ifndef NUMPY_CORE_INCLUDE_NUMPY_UTILS_H_ +#define NUMPY_CORE_INCLUDE_NUMPY_UTILS_H_ + +#ifndef __COMP_NPY_UNUSED + #if defined(__GNUC__) + #define __COMP_NPY_UNUSED __attribute__ ((__unused__)) + #elif defined(__ICC) + #define __COMP_NPY_UNUSED __attribute__ ((__unused__)) + #elif defined(__clang__) + #define __COMP_NPY_UNUSED __attribute__ ((unused)) + #else + #define __COMP_NPY_UNUSED + #endif +#endif + +#if defined(__GNUC__) || defined(__ICC) || defined(__clang__) + #define NPY_DECL_ALIGNED(x) __attribute__ ((aligned (x))) +#elif defined(_MSC_VER) + #define NPY_DECL_ALIGNED(x) __declspec(align(x)) +#else + #define NPY_DECL_ALIGNED(x) +#endif + +/* Use this to tag a variable as not used. It will remove unused variable + * warning on support platforms (see __COM_NPY_UNUSED) and mangle the variable + * to avoid accidental use */ +#define NPY_UNUSED(x) __NPY_UNUSED_TAGGED ## x __COMP_NPY_UNUSED +#define NPY_EXPAND(x) x + +#define NPY_STRINGIFY(x) #x +#define NPY_TOSTRING(x) NPY_STRINGIFY(x) + +#define NPY_CAT__(a, b) a ## b +#define NPY_CAT_(a, b) NPY_CAT__(a, b) +#define NPY_CAT(a, b) NPY_CAT_(a, b) + +#endif /* NUMPY_CORE_INCLUDE_NUMPY_UTILS_H_ */ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/lib/libnpymath.a b/venv/lib/python3.12/site-packages/numpy/_core/lib/libnpymath.a new file mode 100644 index 0000000000000000000000000000000000000000..17e5d828b64ef133745be2a517866a512cac2207 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_core/lib/libnpymath.a differ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/lib/npy-pkg-config/mlib.ini b/venv/lib/python3.12/site-packages/numpy/_core/lib/npy-pkg-config/mlib.ini new file mode 100644 index 0000000000000000000000000000000000000000..5840f5e1bc167f50ebc9fc98d60b60ee21ecbeec --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/lib/npy-pkg-config/mlib.ini @@ -0,0 +1,12 @@ +[meta] +Name = mlib +Description = Math library used with this version of numpy +Version = 1.0 + +[default] +Libs=-lm +Cflags= + +[msvc] +Libs=m.lib +Cflags= diff --git a/venv/lib/python3.12/site-packages/numpy/_core/lib/npy-pkg-config/npymath.ini b/venv/lib/python3.12/site-packages/numpy/_core/lib/npy-pkg-config/npymath.ini new file mode 100644 index 0000000000000000000000000000000000000000..8d879e3fb772ef04afe28bf6670a5d233acfe710 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/lib/npy-pkg-config/npymath.ini @@ -0,0 +1,20 @@ +[meta] +Name=npymath +Description=Portable, core math library implementing C99 standard +Version=0.1 + +[variables] +pkgname=numpy._core +prefix=${pkgdir} +libdir=${prefix}/lib +includedir=${prefix}/include + +[default] +Libs=-L${libdir} -lnpymath +Cflags=-I${includedir} +Requires=mlib + +[msvc] +Libs=/LIBPATH:${libdir} npymath.lib +Cflags=/INCLUDE:${includedir} +Requires=mlib diff --git a/venv/lib/python3.12/site-packages/numpy/_core/lib/pkgconfig/numpy.pc b/venv/lib/python3.12/site-packages/numpy/_core/lib/pkgconfig/numpy.pc new file mode 100644 index 0000000000000000000000000000000000000000..0c8089eab02de0045f4582002e9319c16dcfb2fb --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/lib/pkgconfig/numpy.pc @@ -0,0 +1,7 @@ +prefix=${pcfiledir}/../.. +includedir=${prefix}/include + +Name: numpy +Description: NumPy is the fundamental package for scientific computing with Python. +Version: 2.0.2 +Cflags: -I${includedir} diff --git a/venv/lib/python3.12/site-packages/numpy/_core/memmap.py b/venv/lib/python3.12/site-packages/numpy/_core/memmap.py new file mode 100644 index 0000000000000000000000000000000000000000..fb2c95a9d338816bd58fcf46737c33c3ba389faa --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/memmap.py @@ -0,0 +1,351 @@ +from contextlib import nullcontext +import operator +import numpy as np +from .._utils import set_module +from .numeric import uint8, ndarray, dtype + +__all__ = ['memmap'] + +dtypedescr = dtype +valid_filemodes = ["r", "c", "r+", "w+"] +writeable_filemodes = ["r+", "w+"] + +mode_equivalents = { + "readonly":"r", + "copyonwrite":"c", + "readwrite":"r+", + "write":"w+" + } + + +@set_module('numpy') +class memmap(ndarray): + """Create a memory-map to an array stored in a *binary* file on disk. + + Memory-mapped files are used for accessing small segments of large files + on disk, without reading the entire file into memory. NumPy's + memmap's are array-like objects. This differs from Python's ``mmap`` + module, which uses file-like objects. + + This subclass of ndarray has some unpleasant interactions with + some operations, because it doesn't quite fit properly as a subclass. + An alternative to using this subclass is to create the ``mmap`` + object yourself, then create an ndarray with ndarray.__new__ directly, + passing the object created in its 'buffer=' parameter. + + This class may at some point be turned into a factory function + which returns a view into an mmap buffer. + + Flush the memmap instance to write the changes to the file. Currently there + is no API to close the underlying ``mmap``. It is tricky to ensure the + resource is actually closed, since it may be shared between different + memmap instances. + + + Parameters + ---------- + filename : str, file-like object, or pathlib.Path instance + The file name or file object to be used as the array data buffer. + dtype : data-type, optional + The data-type used to interpret the file contents. + Default is `uint8`. + mode : {'r+', 'r', 'w+', 'c'}, optional + The file is opened in this mode: + + +------+-------------------------------------------------------------+ + | 'r' | Open existing file for reading only. | + +------+-------------------------------------------------------------+ + | 'r+' | Open existing file for reading and writing. | + +------+-------------------------------------------------------------+ + | 'w+' | Create or overwrite existing file for reading and writing. | + | | If ``mode == 'w+'`` then `shape` must also be specified. | + +------+-------------------------------------------------------------+ + | 'c' | Copy-on-write: assignments affect data in memory, but | + | | changes are not saved to disk. The file on disk is | + | | read-only. | + +------+-------------------------------------------------------------+ + + Default is 'r+'. + offset : int, optional + In the file, array data starts at this offset. Since `offset` is + measured in bytes, it should normally be a multiple of the byte-size + of `dtype`. When ``mode != 'r'``, even positive offsets beyond end of + file are valid; The file will be extended to accommodate the + additional data. By default, ``memmap`` will start at the beginning of + the file, even if ``filename`` is a file pointer ``fp`` and + ``fp.tell() != 0``. + shape : int or sequence of ints, optional + The desired shape of the array. If ``mode == 'r'`` and the number + of remaining bytes after `offset` is not a multiple of the byte-size + of `dtype`, you must specify `shape`. By default, the returned array + will be 1-D with the number of elements determined by file size + and data-type. + + .. versionchanged:: 2.0 + The shape parameter can now be any integer sequence type, previously + types were limited to tuple and int. + + order : {'C', 'F'}, optional + Specify the order of the ndarray memory layout: + :term:`row-major`, C-style or :term:`column-major`, + Fortran-style. This only has an effect if the shape is + greater than 1-D. The default order is 'C'. + + Attributes + ---------- + filename : str or pathlib.Path instance + Path to the mapped file. + offset : int + Offset position in the file. + mode : str + File mode. + + Methods + ------- + flush + Flush any changes in memory to file on disk. + When you delete a memmap object, flush is called first to write + changes to disk. + + + See also + -------- + lib.format.open_memmap : Create or load a memory-mapped ``.npy`` file. + + Notes + ----- + The memmap object can be used anywhere an ndarray is accepted. + Given a memmap ``fp``, ``isinstance(fp, numpy.ndarray)`` returns + ``True``. + + Memory-mapped files cannot be larger than 2GB on 32-bit systems. + + When a memmap causes a file to be created or extended beyond its + current size in the filesystem, the contents of the new part are + unspecified. On systems with POSIX filesystem semantics, the extended + part will be filled with zero bytes. + + Examples + -------- + >>> data = np.arange(12, dtype='float32') + >>> data.resize((3,4)) + + This example uses a temporary file so that doctest doesn't write + files to your directory. You would use a 'normal' filename. + + >>> from tempfile import mkdtemp + >>> import os.path as path + >>> filename = path.join(mkdtemp(), 'newfile.dat') + + Create a memmap with dtype and shape that matches our data: + + >>> fp = np.memmap(filename, dtype='float32', mode='w+', shape=(3,4)) + >>> fp + memmap([[0., 0., 0., 0.], + [0., 0., 0., 0.], + [0., 0., 0., 0.]], dtype=float32) + + Write data to memmap array: + + >>> fp[:] = data[:] + >>> fp + memmap([[ 0., 1., 2., 3.], + [ 4., 5., 6., 7.], + [ 8., 9., 10., 11.]], dtype=float32) + + >>> fp.filename == path.abspath(filename) + True + + Flushes memory changes to disk in order to read them back + + >>> fp.flush() + + Load the memmap and verify data was stored: + + >>> newfp = np.memmap(filename, dtype='float32', mode='r', shape=(3,4)) + >>> newfp + memmap([[ 0., 1., 2., 3.], + [ 4., 5., 6., 7.], + [ 8., 9., 10., 11.]], dtype=float32) + + Read-only memmap: + + >>> fpr = np.memmap(filename, dtype='float32', mode='r', shape=(3,4)) + >>> fpr.flags.writeable + False + + Copy-on-write memmap: + + >>> fpc = np.memmap(filename, dtype='float32', mode='c', shape=(3,4)) + >>> fpc.flags.writeable + True + + It's possible to assign to copy-on-write array, but values are only + written into the memory copy of the array, and not written to disk: + + >>> fpc + memmap([[ 0., 1., 2., 3.], + [ 4., 5., 6., 7.], + [ 8., 9., 10., 11.]], dtype=float32) + >>> fpc[0,:] = 0 + >>> fpc + memmap([[ 0., 0., 0., 0.], + [ 4., 5., 6., 7.], + [ 8., 9., 10., 11.]], dtype=float32) + + File on disk is unchanged: + + >>> fpr + memmap([[ 0., 1., 2., 3.], + [ 4., 5., 6., 7.], + [ 8., 9., 10., 11.]], dtype=float32) + + Offset into a memmap: + + >>> fpo = np.memmap(filename, dtype='float32', mode='r', offset=16) + >>> fpo + memmap([ 4., 5., 6., 7., 8., 9., 10., 11.], dtype=float32) + + """ + + __array_priority__ = -100.0 + + def __new__(subtype, filename, dtype=uint8, mode='r+', offset=0, + shape=None, order='C'): + # Import here to minimize 'import numpy' overhead + import mmap + import os.path + try: + mode = mode_equivalents[mode] + except KeyError as e: + if mode not in valid_filemodes: + raise ValueError( + "mode must be one of {!r} (got {!r})" + .format(valid_filemodes + list(mode_equivalents.keys()), mode) + ) from None + + if mode == 'w+' and shape is None: + raise ValueError("shape must be given if mode == 'w+'") + + if hasattr(filename, 'read'): + f_ctx = nullcontext(filename) + else: + f_ctx = open( + os.fspath(filename), + ('r' if mode == 'c' else mode)+'b' + ) + + with f_ctx as fid: + fid.seek(0, 2) + flen = fid.tell() + descr = dtypedescr(dtype) + _dbytes = descr.itemsize + + if shape is None: + bytes = flen - offset + if bytes % _dbytes: + raise ValueError("Size of available data is not a " + "multiple of the data-type size.") + size = bytes // _dbytes + shape = (size,) + else: + if type(shape) not in (tuple, list): + try: + shape = [operator.index(shape)] + except TypeError: + pass + shape = tuple(shape) + size = np.intp(1) # avoid default choice of np.int_, which might overflow + for k in shape: + size *= k + + bytes = int(offset + size*_dbytes) + + if mode in ('w+', 'r+') and flen < bytes: + fid.seek(bytes - 1, 0) + fid.write(b'\0') + fid.flush() + + if mode == 'c': + acc = mmap.ACCESS_COPY + elif mode == 'r': + acc = mmap.ACCESS_READ + else: + acc = mmap.ACCESS_WRITE + + start = offset - offset % mmap.ALLOCATIONGRANULARITY + bytes -= start + array_offset = offset - start + mm = mmap.mmap(fid.fileno(), bytes, access=acc, offset=start) + + self = ndarray.__new__(subtype, shape, dtype=descr, buffer=mm, + offset=array_offset, order=order) + self._mmap = mm + self.offset = offset + self.mode = mode + + if isinstance(filename, os.PathLike): + # special case - if we were constructed with a pathlib.path, + # then filename is a path object, not a string + self.filename = filename.resolve() + elif hasattr(fid, "name") and isinstance(fid.name, str): + # py3 returns int for TemporaryFile().name + self.filename = os.path.abspath(fid.name) + # same as memmap copies (e.g. memmap + 1) + else: + self.filename = None + + return self + + def __array_finalize__(self, obj): + if hasattr(obj, '_mmap') and np.may_share_memory(self, obj): + self._mmap = obj._mmap + self.filename = obj.filename + self.offset = obj.offset + self.mode = obj.mode + else: + self._mmap = None + self.filename = None + self.offset = None + self.mode = None + + def flush(self): + """ + Write any changes in the array to the file on disk. + + For further information, see `memmap`. + + Parameters + ---------- + None + + See Also + -------- + memmap + + """ + if self.base is not None and hasattr(self.base, 'flush'): + self.base.flush() + + def __array_wrap__(self, arr, context=None, return_scalar=False): + arr = super().__array_wrap__(arr, context) + + # Return a memmap if a memmap was given as the output of the + # ufunc. Leave the arr class unchanged if self is not a memmap + # to keep original memmap subclasses behavior + if self is arr or type(self) is not memmap: + return arr + + # Return scalar instead of 0d memmap, e.g. for np.sum with + # axis=None (note that subclasses will not reach here) + if return_scalar: + return arr[()] + + # Return ndarray otherwise + return arr.view(np.ndarray) + + def __getitem__(self, index): + res = super().__getitem__(index) + if type(res) is memmap and res._mmap is None: + return res.view(type=ndarray) + return res diff --git a/venv/lib/python3.12/site-packages/numpy/_core/memmap.pyi b/venv/lib/python3.12/site-packages/numpy/_core/memmap.pyi new file mode 100644 index 0000000000000000000000000000000000000000..03c6b772dcd52c87bb958329f5acecd0ed8c1092 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/memmap.pyi @@ -0,0 +1,3 @@ +from numpy import memmap as memmap + +__all__: list[str] diff --git a/venv/lib/python3.12/site-packages/numpy/_core/multiarray.py b/venv/lib/python3.12/site-packages/numpy/_core/multiarray.py new file mode 100644 index 0000000000000000000000000000000000000000..27c2662c6a61a19338d2db25be4a939f18414337 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/multiarray.py @@ -0,0 +1,1749 @@ +""" +Create the numpy._core.multiarray namespace for backward compatibility. +In v1.16 the multiarray and umath c-extension modules were merged into +a single _multiarray_umath extension module. So we replicate the old +namespace by importing from the extension module. + +""" + +import functools +from . import overrides +from . import _multiarray_umath +from ._multiarray_umath import * # noqa: F403 +# These imports are needed for backward compatibility, +# do not change them. issue gh-15518 +# _get_ndarray_c_version is semi-public, on purpose not added to __all__ +from ._multiarray_umath import ( + _flagdict, from_dlpack, _place, _reconstruct, + _vec_string, _ARRAY_API, _monotonicity, _get_ndarray_c_version, + _get_madvise_hugepage, _set_madvise_hugepage, + _get_promotion_state, _set_promotion_state + ) + +__all__ = [ + '_ARRAY_API', 'ALLOW_THREADS', 'BUFSIZE', 'CLIP', 'DATETIMEUNITS', + 'ITEM_HASOBJECT', 'ITEM_IS_POINTER', 'LIST_PICKLE', 'MAXDIMS', + 'MAY_SHARE_BOUNDS', 'MAY_SHARE_EXACT', 'NEEDS_INIT', 'NEEDS_PYAPI', + 'RAISE', 'USE_GETITEM', 'USE_SETITEM', 'WRAP', + '_flagdict', 'from_dlpack', '_place', '_reconstruct', '_vec_string', + '_monotonicity', 'add_docstring', 'arange', 'array', 'asarray', + 'asanyarray', 'ascontiguousarray', 'asfortranarray', 'bincount', + 'broadcast', 'busday_count', 'busday_offset', 'busdaycalendar', 'can_cast', + 'compare_chararrays', 'concatenate', 'copyto', 'correlate', 'correlate2', + 'count_nonzero', 'c_einsum', 'datetime_as_string', 'datetime_data', + 'dot', 'dragon4_positional', 'dragon4_scientific', 'dtype', + 'empty', 'empty_like', 'error', 'flagsobj', 'flatiter', 'format_longfloat', + 'frombuffer', 'fromfile', 'fromiter', 'fromstring', + 'get_handler_name', 'get_handler_version', 'inner', 'interp', + 'interp_complex', 'is_busday', 'lexsort', 'matmul', 'may_share_memory', + 'min_scalar_type', 'ndarray', 'nditer', 'nested_iters', + 'normalize_axis_index', 'packbits', 'promote_types', 'putmask', + 'ravel_multi_index', 'result_type', 'scalar', 'set_datetimeparse_function', + 'set_legacy_print_mode', + 'set_typeDict', 'shares_memory', 'typeinfo', + 'unpackbits', 'unravel_index', 'vdot', 'where', 'zeros', + '_get_promotion_state', '_set_promotion_state'] + +# For backward compatibility, make sure pickle imports +# these functions from here +_reconstruct.__module__ = 'numpy._core.multiarray' +scalar.__module__ = 'numpy._core.multiarray' + + +from_dlpack.__module__ = 'numpy' +arange.__module__ = 'numpy' +array.__module__ = 'numpy' +asarray.__module__ = 'numpy' +asanyarray.__module__ = 'numpy' +ascontiguousarray.__module__ = 'numpy' +asfortranarray.__module__ = 'numpy' +datetime_data.__module__ = 'numpy' +empty.__module__ = 'numpy' +frombuffer.__module__ = 'numpy' +fromfile.__module__ = 'numpy' +fromiter.__module__ = 'numpy' +frompyfunc.__module__ = 'numpy' +fromstring.__module__ = 'numpy' +may_share_memory.__module__ = 'numpy' +nested_iters.__module__ = 'numpy' +promote_types.__module__ = 'numpy' +zeros.__module__ = 'numpy' +_get_promotion_state.__module__ = 'numpy' +_set_promotion_state.__module__ = 'numpy' +normalize_axis_index.__module__ = 'numpy.lib.array_utils' + + +# We can't verify dispatcher signatures because NumPy's C functions don't +# support introspection. +array_function_from_c_func_and_dispatcher = functools.partial( + overrides.array_function_from_dispatcher, + module='numpy', docs_from_dispatcher=True, verify=False) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.empty_like) +def empty_like( + prototype, dtype=None, order=None, subok=None, shape=None, *, device=None +): + """ + empty_like(prototype, dtype=None, order='K', subok=True, shape=None, *, + device=None) + + Return a new array with the same shape and type as a given array. + + Parameters + ---------- + prototype : array_like + The shape and data-type of `prototype` define these same attributes + of the returned array. + dtype : data-type, optional + Overrides the data type of the result. + + .. versionadded:: 1.6.0 + order : {'C', 'F', 'A', or 'K'}, optional + Overrides the memory layout of the result. 'C' means C-order, + 'F' means F-order, 'A' means 'F' if `prototype` is Fortran + contiguous, 'C' otherwise. 'K' means match the layout of `prototype` + as closely as possible. + + .. versionadded:: 1.6.0 + subok : bool, optional. + If True, then the newly created array will use the sub-class + type of `prototype`, otherwise it will be a base-class array. Defaults + to True. + shape : int or sequence of ints, optional. + Overrides the shape of the result. If order='K' and the number of + dimensions is unchanged, will try to keep order, otherwise, + order='C' is implied. + + .. versionadded:: 1.17.0 + device : str, optional + The device on which to place the created array. Default: None. + For Array-API interoperability only, so must be ``"cpu"`` if passed. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : ndarray + Array of uninitialized (arbitrary) data with the same + shape and type as `prototype`. + + See Also + -------- + ones_like : Return an array of ones with shape and type of input. + zeros_like : Return an array of zeros with shape and type of input. + full_like : Return a new array with shape of input filled with value. + empty : Return a new uninitialized array. + + Notes + ----- + Unlike other array creation functions (e.g. `zeros_like`, `ones_like`, + `full_like`), `empty_like` does not initialize the values of the array, + and may therefore be marginally faster. However, the values stored in the + newly allocated array are arbitrary. For reproducible behavior, be sure + to set each element of the array before reading. + + Examples + -------- + >>> a = ([1,2,3], [4,5,6]) # a is array-like + >>> np.empty_like(a) + array([[-1073741821, -1073741821, 3], # uninitialized + [ 0, 0, -1073741821]]) + >>> a = np.array([[1., 2., 3.],[4.,5.,6.]]) + >>> np.empty_like(a) + array([[ -2.00000715e+000, 1.48219694e-323, -2.00000572e+000], # uninit + [ 4.38791518e-305, -2.00000715e+000, 4.17269252e-309]]) + + """ + return (prototype,) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.concatenate) +def concatenate(arrays, axis=None, out=None, *, dtype=None, casting=None): + """ + concatenate( + (a1, a2, ...), + axis=0, + out=None, + dtype=None, + casting="same_kind" + ) + + Join a sequence of arrays along an existing axis. + + Parameters + ---------- + a1, a2, ... : sequence of array_like + The arrays must have the same shape, except in the dimension + corresponding to `axis` (the first, by default). + axis : int, optional + The axis along which the arrays will be joined. If axis is None, + arrays are flattened before use. Default is 0. + out : ndarray, optional + If provided, the destination to place the result. The shape must be + correct, matching that of what concatenate would have returned if no + out argument were specified. + dtype : str or dtype + If provided, the destination array will have this dtype. Cannot be + provided together with `out`. + + .. versionadded:: 1.20.0 + + casting : {'no', 'equiv', 'safe', 'same_kind', 'unsafe'}, optional + Controls what kind of data casting may occur. Defaults to 'same_kind'. + For a description of the options, please see :term:`casting`. + + .. versionadded:: 1.20.0 + + Returns + ------- + res : ndarray + The concatenated array. + + See Also + -------- + ma.concatenate : Concatenate function that preserves input masks. + array_split : Split an array into multiple sub-arrays of equal or + near-equal size. + split : Split array into a list of multiple sub-arrays of equal size. + hsplit : Split array into multiple sub-arrays horizontally (column wise). + vsplit : Split array into multiple sub-arrays vertically (row wise). + dsplit : Split array into multiple sub-arrays along the 3rd axis (depth). + stack : Stack a sequence of arrays along a new axis. + block : Assemble arrays from blocks. + hstack : Stack arrays in sequence horizontally (column wise). + vstack : Stack arrays in sequence vertically (row wise). + dstack : Stack arrays in sequence depth wise (along third dimension). + column_stack : Stack 1-D arrays as columns into a 2-D array. + + Notes + ----- + When one or more of the arrays to be concatenated is a MaskedArray, + this function will return a MaskedArray object instead of an ndarray, + but the input masks are *not* preserved. In cases where a MaskedArray + is expected as input, use the ma.concatenate function from the masked + array module instead. + + Examples + -------- + >>> a = np.array([[1, 2], [3, 4]]) + >>> b = np.array([[5, 6]]) + >>> np.concatenate((a, b), axis=0) + array([[1, 2], + [3, 4], + [5, 6]]) + >>> np.concatenate((a, b.T), axis=1) + array([[1, 2, 5], + [3, 4, 6]]) + >>> np.concatenate((a, b), axis=None) + array([1, 2, 3, 4, 5, 6]) + + This function will not preserve masking of MaskedArray inputs. + + >>> a = np.ma.arange(3) + >>> a[1] = np.ma.masked + >>> b = np.arange(2, 5) + >>> a + masked_array(data=[0, --, 2], + mask=[False, True, False], + fill_value=999999) + >>> b + array([2, 3, 4]) + >>> np.concatenate([a, b]) + masked_array(data=[0, 1, 2, 2, 3, 4], + mask=False, + fill_value=999999) + >>> np.ma.concatenate([a, b]) + masked_array(data=[0, --, 2, 2, 3, 4], + mask=[False, True, False, False, False, False], + fill_value=999999) + + """ + if out is not None: + # optimize for the typical case where only arrays is provided + arrays = list(arrays) + arrays.append(out) + return arrays + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.inner) +def inner(a, b): + """ + inner(a, b, /) + + Inner product of two arrays. + + Ordinary inner product of vectors for 1-D arrays (without complex + conjugation), in higher dimensions a sum product over the last axes. + + Parameters + ---------- + a, b : array_like + If `a` and `b` are nonscalar, their last dimensions must match. + + Returns + ------- + out : ndarray + If `a` and `b` are both + scalars or both 1-D arrays then a scalar is returned; otherwise + an array is returned. + ``out.shape = (*a.shape[:-1], *b.shape[:-1])`` + + Raises + ------ + ValueError + If both `a` and `b` are nonscalar and their last dimensions have + different sizes. + + See Also + -------- + tensordot : Sum products over arbitrary axes. + dot : Generalised matrix product, using second last dimension of `b`. + einsum : Einstein summation convention. + + Notes + ----- + For vectors (1-D arrays) it computes the ordinary inner-product:: + + np.inner(a, b) = sum(a[:]*b[:]) + + More generally, if ``ndim(a) = r > 0`` and ``ndim(b) = s > 0``:: + + np.inner(a, b) = np.tensordot(a, b, axes=(-1,-1)) + + or explicitly:: + + np.inner(a, b)[i0,...,ir-2,j0,...,js-2] + = sum(a[i0,...,ir-2,:]*b[j0,...,js-2,:]) + + In addition `a` or `b` may be scalars, in which case:: + + np.inner(a,b) = a*b + + Examples + -------- + Ordinary inner product for vectors: + + >>> a = np.array([1,2,3]) + >>> b = np.array([0,1,0]) + >>> np.inner(a, b) + 2 + + Some multidimensional examples: + + >>> a = np.arange(24).reshape((2,3,4)) + >>> b = np.arange(4) + >>> c = np.inner(a, b) + >>> c.shape + (2, 3) + >>> c + array([[ 14, 38, 62], + [ 86, 110, 134]]) + + >>> a = np.arange(2).reshape((1,1,2)) + >>> b = np.arange(6).reshape((3,2)) + >>> c = np.inner(a, b) + >>> c.shape + (1, 1, 3) + >>> c + array([[[1, 3, 5]]]) + + An example where `b` is a scalar: + + >>> np.inner(np.eye(2), 7) + array([[7., 0.], + [0., 7.]]) + + """ + return (a, b) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.where) +def where(condition, x=None, y=None): + """ + where(condition, [x, y], /) + + Return elements chosen from `x` or `y` depending on `condition`. + + .. note:: + When only `condition` is provided, this function is a shorthand for + ``np.asarray(condition).nonzero()``. Using `nonzero` directly should be + preferred, as it behaves correctly for subclasses. The rest of this + documentation covers only the case where all three arguments are + provided. + + Parameters + ---------- + condition : array_like, bool + Where True, yield `x`, otherwise yield `y`. + x, y : array_like + Values from which to choose. `x`, `y` and `condition` need to be + broadcastable to some shape. + + Returns + ------- + out : ndarray + An array with elements from `x` where `condition` is True, and elements + from `y` elsewhere. + + See Also + -------- + choose + nonzero : The function that is called when x and y are omitted + + Notes + ----- + If all the arrays are 1-D, `where` is equivalent to:: + + [xv if c else yv + for c, xv, yv in zip(condition, x, y)] + + Examples + -------- + >>> a = np.arange(10) + >>> a + array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]) + >>> np.where(a < 5, a, 10*a) + array([ 0, 1, 2, 3, 4, 50, 60, 70, 80, 90]) + + This can be used on multidimensional arrays too: + + >>> np.where([[True, False], [True, True]], + ... [[1, 2], [3, 4]], + ... [[9, 8], [7, 6]]) + array([[1, 8], + [3, 4]]) + + The shapes of x, y, and the condition are broadcast together: + + >>> x, y = np.ogrid[:3, :4] + >>> np.where(x < y, x, 10 + y) # both x and 10+y are broadcast + array([[10, 0, 0, 0], + [10, 11, 1, 1], + [10, 11, 12, 2]]) + + >>> a = np.array([[0, 1, 2], + ... [0, 2, 4], + ... [0, 3, 6]]) + >>> np.where(a < 4, a, -1) # -1 is broadcast + array([[ 0, 1, 2], + [ 0, 2, -1], + [ 0, 3, -1]]) + """ + return (condition, x, y) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.lexsort) +def lexsort(keys, axis=None): + """ + lexsort(keys, axis=-1) + + Perform an indirect stable sort using a sequence of keys. + + Given multiple sorting keys, lexsort returns an array of integer indices + that describes the sort order by multiple keys. The last key in the + sequence is used for the primary sort order, ties are broken by the + second-to-last key, and so on. + + Parameters + ---------- + keys : (k, m, n, ...) array-like + The `k` keys to be sorted. The *last* key (e.g, the last + row if `keys` is a 2D array) is the primary sort key. + Each element of `keys` along the zeroth axis must be + an array-like object of the same shape. + axis : int, optional + Axis to be indirectly sorted. By default, sort over the last axis + of each sequence. Separate slices along `axis` sorted over + independently; see last example. + + Returns + ------- + indices : (m, n, ...) ndarray of ints + Array of indices that sort the keys along the specified axis. + + See Also + -------- + argsort : Indirect sort. + ndarray.sort : In-place sort. + sort : Return a sorted copy of an array. + + Examples + -------- + Sort names: first by surname, then by name. + + >>> surnames = ('Hertz', 'Galilei', 'Hertz') + >>> first_names = ('Heinrich', 'Galileo', 'Gustav') + >>> ind = np.lexsort((first_names, surnames)) + >>> ind + array([1, 2, 0]) + + >>> [surnames[i] + ", " + first_names[i] for i in ind] + ['Galilei, Galileo', 'Hertz, Gustav', 'Hertz, Heinrich'] + + Sort according to two numerical keys, first by elements + of ``a``, then breaking ties according to elements of ``b``: + + >>> a = [1, 5, 1, 4, 3, 4, 4] # First sequence + >>> b = [9, 4, 0, 4, 0, 2, 1] # Second sequence + >>> ind = np.lexsort((b, a)) # Sort by `a`, then by `b` + >>> ind + array([2, 0, 4, 6, 5, 3, 1]) + >>> [(a[i], b[i]) for i in ind] + [(1, 0), (1, 9), (3, 0), (4, 1), (4, 2), (4, 4), (5, 4)] + + Compare against `argsort`, which would sort each key independently. + + >>> np.argsort((b, a), kind='stable') + array([[2, 4, 6, 5, 1, 3, 0], + [0, 2, 4, 3, 5, 6, 1]]) + + To sort lexicographically with `argsort`, we would need to provide a + structured array. + + >>> x = np.array([(ai, bi) for ai, bi in zip(a, b)], + ... dtype = np.dtype([('x', int), ('y', int)])) + >>> np.argsort(x) # or np.argsort(x, order=('x', 'y')) + array([2, 0, 4, 6, 5, 3, 1]) + + The zeroth axis of `keys` always corresponds with the sequence of keys, + so 2D arrays are treated just like other sequences of keys. + + >>> arr = np.asarray([b, a]) + >>> ind2 = np.lexsort(arr) + >>> np.testing.assert_equal(ind2, ind) + + Accordingly, the `axis` parameter refers to an axis of *each* key, not of + the `keys` argument itself. For instance, the array ``arr`` is treated as + a sequence of two 1-D keys, so specifying ``axis=0`` is equivalent to + using the default axis, ``axis=-1``. + + >>> np.testing.assert_equal(np.lexsort(arr, axis=0), + ... np.lexsort(arr, axis=-1)) + + For higher-dimensional arrays, the axis parameter begins to matter. The + resulting array has the same shape as each key, and the values are what + we would expect if `lexsort` were performed on corresponding slices + of the keys independently. For instance, + + >>> x = [[1, 2, 3, 4], + ... [4, 3, 2, 1], + ... [2, 1, 4, 3]] + >>> y = [[2, 2, 1, 1], + ... [1, 2, 1, 2], + ... [1, 1, 2, 1]] + >>> np.lexsort((x, y), axis=1) + array([[2, 3, 0, 1], + [2, 0, 3, 1], + [1, 0, 3, 2]]) + + Each row of the result is what we would expect if we were to perform + `lexsort` on the corresponding row of the keys: + + >>> for i in range(3): + ... print(np.lexsort((x[i], y[i]))) + [2 3 0 1] + [2 0 3 1] + [1 0 3 2] + + """ + if isinstance(keys, tuple): + return keys + else: + return (keys,) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.can_cast) +def can_cast(from_, to, casting=None): + """ + can_cast(from_, to, casting='safe') + + Returns True if cast between data types can occur according to the + casting rule. + + Parameters + ---------- + from_ : dtype, dtype specifier, NumPy scalar, or array + Data type, NumPy scalar, or array to cast from. + to : dtype or dtype specifier + Data type to cast to. + casting : {'no', 'equiv', 'safe', 'same_kind', 'unsafe'}, optional + Controls what kind of data casting may occur. + + * 'no' means the data types should not be cast at all. + * 'equiv' means only byte-order changes are allowed. + * 'safe' means only casts which can preserve values are allowed. + * 'same_kind' means only safe casts or casts within a kind, + like float64 to float32, are allowed. + * 'unsafe' means any data conversions may be done. + + Returns + ------- + out : bool + True if cast can occur according to the casting rule. + + Notes + ----- + .. versionchanged:: 1.17.0 + Casting between a simple data type and a structured one is possible only + for "unsafe" casting. Casting to multiple fields is allowed, but + casting from multiple fields is not. + + .. versionchanged:: 1.9.0 + Casting from numeric to string types in 'safe' casting mode requires + that the string dtype length is long enough to store the maximum + integer/float value converted. + + .. versionchanged:: 2.0 + This function does not support Python scalars anymore and does not + apply any value-based logic for 0-D arrays and NumPy scalars. + + See also + -------- + dtype, result_type + + Examples + -------- + Basic examples + + >>> np.can_cast(np.int32, np.int64) + True + >>> np.can_cast(np.float64, complex) + True + >>> np.can_cast(complex, float) + False + + >>> np.can_cast('i8', 'f8') + True + >>> np.can_cast('i8', 'f4') + False + >>> np.can_cast('i4', 'S4') + False + + """ + return (from_,) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.min_scalar_type) +def min_scalar_type(a): + """ + min_scalar_type(a, /) + + For scalar ``a``, returns the data type with the smallest size + and smallest scalar kind which can hold its value. For non-scalar + array ``a``, returns the vector's dtype unmodified. + + Floating point values are not demoted to integers, + and complex values are not demoted to floats. + + Parameters + ---------- + a : scalar or array_like + The value whose minimal data type is to be found. + + Returns + ------- + out : dtype + The minimal data type. + + Notes + ----- + .. versionadded:: 1.6.0 + + See Also + -------- + result_type, promote_types, dtype, can_cast + + Examples + -------- + >>> np.min_scalar_type(10) + dtype('uint8') + + >>> np.min_scalar_type(-260) + dtype('int16') + + >>> np.min_scalar_type(3.1) + dtype('float16') + + >>> np.min_scalar_type(1e50) + dtype('float64') + + >>> np.min_scalar_type(np.arange(4,dtype='f8')) + dtype('float64') + + """ + return (a,) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.result_type) +def result_type(*arrays_and_dtypes): + """ + result_type(*arrays_and_dtypes) + + Returns the type that results from applying the NumPy + type promotion rules to the arguments. + + Type promotion in NumPy works similarly to the rules in languages + like C++, with some slight differences. When both scalars and + arrays are used, the array's type takes precedence and the actual value + of the scalar is taken into account. + + For example, calculating 3*a, where a is an array of 32-bit floats, + intuitively should result in a 32-bit float output. If the 3 is a + 32-bit integer, the NumPy rules indicate it can't convert losslessly + into a 32-bit float, so a 64-bit float should be the result type. + By examining the value of the constant, '3', we see that it fits in + an 8-bit integer, which can be cast losslessly into the 32-bit float. + + Parameters + ---------- + arrays_and_dtypes : list of arrays and dtypes + The operands of some operation whose result type is needed. + + Returns + ------- + out : dtype + The result type. + + See also + -------- + dtype, promote_types, min_scalar_type, can_cast + + Notes + ----- + .. versionadded:: 1.6.0 + + The specific algorithm used is as follows. + + Categories are determined by first checking which of boolean, + integer (int/uint), or floating point (float/complex) the maximum + kind of all the arrays and the scalars are. + + If there are only scalars or the maximum category of the scalars + is higher than the maximum category of the arrays, + the data types are combined with :func:`promote_types` + to produce the return value. + + Otherwise, `min_scalar_type` is called on each scalar, and + the resulting data types are all combined with :func:`promote_types` + to produce the return value. + + The set of int values is not a subset of the uint values for types + with the same number of bits, something not reflected in + :func:`min_scalar_type`, but handled as a special case in `result_type`. + + Examples + -------- + >>> np.result_type(3, np.arange(7, dtype='i1')) + dtype('int8') + + >>> np.result_type('i4', 'c8') + dtype('complex128') + + >>> np.result_type(3.0, -2) + dtype('float64') + + """ + return arrays_and_dtypes + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.dot) +def dot(a, b, out=None): + """ + dot(a, b, out=None) + + Dot product of two arrays. Specifically, + + - If both `a` and `b` are 1-D arrays, it is inner product of vectors + (without complex conjugation). + + - If both `a` and `b` are 2-D arrays, it is matrix multiplication, + but using :func:`matmul` or ``a @ b`` is preferred. + + - If either `a` or `b` is 0-D (scalar), it is equivalent to + :func:`multiply` and using ``numpy.multiply(a, b)`` or ``a * b`` is + preferred. + + - If `a` is an N-D array and `b` is a 1-D array, it is a sum product over + the last axis of `a` and `b`. + + - If `a` is an N-D array and `b` is an M-D array (where ``M>=2``), it is a + sum product over the last axis of `a` and the second-to-last axis of + `b`:: + + dot(a, b)[i,j,k,m] = sum(a[i,j,:] * b[k,:,m]) + + It uses an optimized BLAS library when possible (see `numpy.linalg`). + + Parameters + ---------- + a : array_like + First argument. + b : array_like + Second argument. + out : ndarray, optional + Output argument. This must have the exact kind that would be returned + if it was not used. In particular, it must have the right type, must be + C-contiguous, and its dtype must be the dtype that would be returned + for `dot(a,b)`. This is a performance feature. Therefore, if these + conditions are not met, an exception is raised, instead of attempting + to be flexible. + + Returns + ------- + output : ndarray + Returns the dot product of `a` and `b`. If `a` and `b` are both + scalars or both 1-D arrays then a scalar is returned; otherwise + an array is returned. + If `out` is given, then it is returned. + + Raises + ------ + ValueError + If the last dimension of `a` is not the same size as + the second-to-last dimension of `b`. + + See Also + -------- + vdot : Complex-conjugating dot product. + tensordot : Sum products over arbitrary axes. + einsum : Einstein summation convention. + matmul : '@' operator as method with out parameter. + linalg.multi_dot : Chained dot product. + + Examples + -------- + >>> np.dot(3, 4) + 12 + + Neither argument is complex-conjugated: + + >>> np.dot([2j, 3j], [2j, 3j]) + (-13+0j) + + For 2-D arrays it is the matrix product: + + >>> a = [[1, 0], [0, 1]] + >>> b = [[4, 1], [2, 2]] + >>> np.dot(a, b) + array([[4, 1], + [2, 2]]) + + >>> a = np.arange(3*4*5*6).reshape((3,4,5,6)) + >>> b = np.arange(3*4*5*6)[::-1].reshape((5,4,6,3)) + >>> np.dot(a, b)[2,3,2,1,2,2] + 499128 + >>> sum(a[2,3,2,:] * b[1,2,:,2]) + 499128 + + """ + return (a, b, out) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.vdot) +def vdot(a, b): + """ + vdot(a, b, /) + + Return the dot product of two vectors. + + The vdot(`a`, `b`) function handles complex numbers differently than + dot(`a`, `b`). If the first argument is complex the complex conjugate + of the first argument is used for the calculation of the dot product. + + Note that `vdot` handles multidimensional arrays differently than `dot`: + it does *not* perform a matrix product, but flattens input arguments + to 1-D vectors first. Consequently, it should only be used for vectors. + + Parameters + ---------- + a : array_like + If `a` is complex the complex conjugate is taken before calculation + of the dot product. + b : array_like + Second argument to the dot product. + + Returns + ------- + output : ndarray + Dot product of `a` and `b`. Can be an int, float, or + complex depending on the types of `a` and `b`. + + See Also + -------- + dot : Return the dot product without using the complex conjugate of the + first argument. + + Examples + -------- + >>> a = np.array([1+2j,3+4j]) + >>> b = np.array([5+6j,7+8j]) + >>> np.vdot(a, b) + (70-8j) + >>> np.vdot(b, a) + (70+8j) + + Note that higher-dimensional arrays are flattened! + + >>> a = np.array([[1, 4], [5, 6]]) + >>> b = np.array([[4, 1], [2, 2]]) + >>> np.vdot(a, b) + 30 + >>> np.vdot(b, a) + 30 + >>> 1*4 + 4*1 + 5*2 + 6*2 + 30 + + """ + return (a, b) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.bincount) +def bincount(x, weights=None, minlength=None): + """ + bincount(x, /, weights=None, minlength=0) + + Count number of occurrences of each value in array of non-negative ints. + + The number of bins (of size 1) is one larger than the largest value in + `x`. If `minlength` is specified, there will be at least this number + of bins in the output array (though it will be longer if necessary, + depending on the contents of `x`). + Each bin gives the number of occurrences of its index value in `x`. + If `weights` is specified the input array is weighted by it, i.e. if a + value ``n`` is found at position ``i``, ``out[n] += weight[i]`` instead + of ``out[n] += 1``. + + Parameters + ---------- + x : array_like, 1 dimension, nonnegative ints + Input array. + weights : array_like, optional + Weights, array of the same shape as `x`. + minlength : int, optional + A minimum number of bins for the output array. + + .. versionadded:: 1.6.0 + + Returns + ------- + out : ndarray of ints + The result of binning the input array. + The length of `out` is equal to ``np.amax(x)+1``. + + Raises + ------ + ValueError + If the input is not 1-dimensional, or contains elements with negative + values, or if `minlength` is negative. + TypeError + If the type of the input is float or complex. + + See Also + -------- + histogram, digitize, unique + + Examples + -------- + >>> np.bincount(np.arange(5)) + array([1, 1, 1, 1, 1]) + >>> np.bincount(np.array([0, 1, 1, 3, 2, 1, 7])) + array([1, 3, 1, 1, 0, 0, 0, 1]) + + >>> x = np.array([0, 1, 1, 3, 2, 1, 7, 23]) + >>> np.bincount(x).size == np.amax(x)+1 + True + + The input array needs to be of integer dtype, otherwise a + TypeError is raised: + + >>> np.bincount(np.arange(5, dtype=float)) + Traceback (most recent call last): + ... + TypeError: Cannot cast array data from dtype('float64') to dtype('int64') + according to the rule 'safe' + + A possible use of ``bincount`` is to perform sums over + variable-size chunks of an array, using the ``weights`` keyword. + + >>> w = np.array([0.3, 0.5, 0.2, 0.7, 1., -0.6]) # weights + >>> x = np.array([0, 1, 1, 2, 2, 2]) + >>> np.bincount(x, weights=w) + array([ 0.3, 0.7, 1.1]) + + """ + return (x, weights) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.ravel_multi_index) +def ravel_multi_index(multi_index, dims, mode=None, order=None): + """ + ravel_multi_index(multi_index, dims, mode='raise', order='C') + + Converts a tuple of index arrays into an array of flat + indices, applying boundary modes to the multi-index. + + Parameters + ---------- + multi_index : tuple of array_like + A tuple of integer arrays, one array for each dimension. + dims : tuple of ints + The shape of array into which the indices from ``multi_index`` apply. + mode : {'raise', 'wrap', 'clip'}, optional + Specifies how out-of-bounds indices are handled. Can specify + either one mode or a tuple of modes, one mode per index. + + * 'raise' -- raise an error (default) + * 'wrap' -- wrap around + * 'clip' -- clip to the range + + In 'clip' mode, a negative index which would normally + wrap will clip to 0 instead. + order : {'C', 'F'}, optional + Determines whether the multi-index should be viewed as + indexing in row-major (C-style) or column-major + (Fortran-style) order. + + Returns + ------- + raveled_indices : ndarray + An array of indices into the flattened version of an array + of dimensions ``dims``. + + See Also + -------- + unravel_index + + Notes + ----- + .. versionadded:: 1.6.0 + + Examples + -------- + >>> arr = np.array([[3,6,6],[4,5,1]]) + >>> np.ravel_multi_index(arr, (7,6)) + array([22, 41, 37]) + >>> np.ravel_multi_index(arr, (7,6), order='F') + array([31, 41, 13]) + >>> np.ravel_multi_index(arr, (4,6), mode='clip') + array([22, 23, 19]) + >>> np.ravel_multi_index(arr, (4,4), mode=('clip','wrap')) + array([12, 13, 13]) + + >>> np.ravel_multi_index((3,1,4,1), (6,7,8,9)) + 1621 + """ + return multi_index + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.unravel_index) +def unravel_index(indices, shape=None, order=None): + """ + unravel_index(indices, shape, order='C') + + Converts a flat index or array of flat indices into a tuple + of coordinate arrays. + + Parameters + ---------- + indices : array_like + An integer array whose elements are indices into the flattened + version of an array of dimensions ``shape``. Before version 1.6.0, + this function accepted just one index value. + shape : tuple of ints + The shape of the array to use for unraveling ``indices``. + + .. versionchanged:: 1.16.0 + Renamed from ``dims`` to ``shape``. + + order : {'C', 'F'}, optional + Determines whether the indices should be viewed as indexing in + row-major (C-style) or column-major (Fortran-style) order. + + .. versionadded:: 1.6.0 + + Returns + ------- + unraveled_coords : tuple of ndarray + Each array in the tuple has the same shape as the ``indices`` + array. + + See Also + -------- + ravel_multi_index + + Examples + -------- + >>> np.unravel_index([22, 41, 37], (7,6)) + (array([3, 6, 6]), array([4, 5, 1])) + >>> np.unravel_index([31, 41, 13], (7,6), order='F') + (array([3, 6, 6]), array([4, 5, 1])) + + >>> np.unravel_index(1621, (6,7,8,9)) + (3, 1, 4, 1) + + """ + return (indices,) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.copyto) +def copyto(dst, src, casting=None, where=None): + """ + copyto(dst, src, casting='same_kind', where=True) + + Copies values from one array to another, broadcasting as necessary. + + Raises a TypeError if the `casting` rule is violated, and if + `where` is provided, it selects which elements to copy. + + .. versionadded:: 1.7.0 + + Parameters + ---------- + dst : ndarray + The array into which values are copied. + src : array_like + The array from which values are copied. + casting : {'no', 'equiv', 'safe', 'same_kind', 'unsafe'}, optional + Controls what kind of data casting may occur when copying. + + * 'no' means the data types should not be cast at all. + * 'equiv' means only byte-order changes are allowed. + * 'safe' means only casts which can preserve values are allowed. + * 'same_kind' means only safe casts or casts within a kind, + like float64 to float32, are allowed. + * 'unsafe' means any data conversions may be done. + where : array_like of bool, optional + A boolean array which is broadcasted to match the dimensions + of `dst`, and selects elements to copy from `src` to `dst` + wherever it contains the value True. + + Examples + -------- + >>> A = np.array([4, 5, 6]) + >>> B = [1, 2, 3] + >>> np.copyto(A, B) + >>> A + array([1, 2, 3]) + + >>> A = np.array([[1, 2, 3], [4, 5, 6]]) + >>> B = [[4, 5, 6], [7, 8, 9]] + >>> np.copyto(A, B) + >>> A + array([[4, 5, 6], + [7, 8, 9]]) + + """ + return (dst, src, where) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.putmask) +def putmask(a, /, mask, values): + """ + putmask(a, mask, values) + + Changes elements of an array based on conditional and input values. + + Sets ``a.flat[n] = values[n]`` for each n where ``mask.flat[n]==True``. + + If `values` is not the same size as `a` and `mask` then it will repeat. + This gives behavior different from ``a[mask] = values``. + + Parameters + ---------- + a : ndarray + Target array. + mask : array_like + Boolean mask array. It has to be the same shape as `a`. + values : array_like + Values to put into `a` where `mask` is True. If `values` is smaller + than `a` it will be repeated. + + See Also + -------- + place, put, take, copyto + + Examples + -------- + >>> x = np.arange(6).reshape(2, 3) + >>> np.putmask(x, x>2, x**2) + >>> x + array([[ 0, 1, 2], + [ 9, 16, 25]]) + + If `values` is smaller than `a` it is repeated: + + >>> x = np.arange(5) + >>> np.putmask(x, x>1, [-33, -44]) + >>> x + array([ 0, 1, -33, -44, -33]) + + """ + return (a, mask, values) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.packbits) +def packbits(a, axis=None, bitorder='big'): + """ + packbits(a, /, axis=None, bitorder='big') + + Packs the elements of a binary-valued array into bits in a uint8 array. + + The result is padded to full bytes by inserting zero bits at the end. + + Parameters + ---------- + a : array_like + An array of integers or booleans whose elements should be packed to + bits. + axis : int, optional + The dimension over which bit-packing is done. + ``None`` implies packing the flattened array. + bitorder : {'big', 'little'}, optional + The order of the input bits. 'big' will mimic bin(val), + ``[0, 0, 0, 0, 0, 0, 1, 1] => 3 = 0b00000011``, 'little' will + reverse the order so ``[1, 1, 0, 0, 0, 0, 0, 0] => 3``. + Defaults to 'big'. + + .. versionadded:: 1.17.0 + + Returns + ------- + packed : ndarray + Array of type uint8 whose elements represent bits corresponding to the + logical (0 or nonzero) value of the input elements. The shape of + `packed` has the same number of dimensions as the input (unless `axis` + is None, in which case the output is 1-D). + + See Also + -------- + unpackbits: Unpacks elements of a uint8 array into a binary-valued output + array. + + Examples + -------- + >>> a = np.array([[[1,0,1], + ... [0,1,0]], + ... [[1,1,0], + ... [0,0,1]]]) + >>> b = np.packbits(a, axis=-1) + >>> b + array([[[160], + [ 64]], + [[192], + [ 32]]], dtype=uint8) + + Note that in binary 160 = 1010 0000, 64 = 0100 0000, 192 = 1100 0000, + and 32 = 0010 0000. + + """ + return (a,) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.unpackbits) +def unpackbits(a, axis=None, count=None, bitorder='big'): + """ + unpackbits(a, /, axis=None, count=None, bitorder='big') + + Unpacks elements of a uint8 array into a binary-valued output array. + + Each element of `a` represents a bit-field that should be unpacked + into a binary-valued output array. The shape of the output array is + either 1-D (if `axis` is ``None``) or the same shape as the input + array with unpacking done along the axis specified. + + Parameters + ---------- + a : ndarray, uint8 type + Input array. + axis : int, optional + The dimension over which bit-unpacking is done. + ``None`` implies unpacking the flattened array. + count : int or None, optional + The number of elements to unpack along `axis`, provided as a way + of undoing the effect of packing a size that is not a multiple + of eight. A non-negative number means to only unpack `count` + bits. A negative number means to trim off that many bits from + the end. ``None`` means to unpack the entire array (the + default). Counts larger than the available number of bits will + add zero padding to the output. Negative counts must not + exceed the available number of bits. + + .. versionadded:: 1.17.0 + + bitorder : {'big', 'little'}, optional + The order of the returned bits. 'big' will mimic bin(val), + ``3 = 0b00000011 => [0, 0, 0, 0, 0, 0, 1, 1]``, 'little' will reverse + the order to ``[1, 1, 0, 0, 0, 0, 0, 0]``. + Defaults to 'big'. + + .. versionadded:: 1.17.0 + + Returns + ------- + unpacked : ndarray, uint8 type + The elements are binary-valued (0 or 1). + + See Also + -------- + packbits : Packs the elements of a binary-valued array into bits in + a uint8 array. + + Examples + -------- + >>> a = np.array([[2], [7], [23]], dtype=np.uint8) + >>> a + array([[ 2], + [ 7], + [23]], dtype=uint8) + >>> b = np.unpackbits(a, axis=1) + >>> b + array([[0, 0, 0, 0, 0, 0, 1, 0], + [0, 0, 0, 0, 0, 1, 1, 1], + [0, 0, 0, 1, 0, 1, 1, 1]], dtype=uint8) + >>> c = np.unpackbits(a, axis=1, count=-3) + >>> c + array([[0, 0, 0, 0, 0], + [0, 0, 0, 0, 0], + [0, 0, 0, 1, 0]], dtype=uint8) + + >>> p = np.packbits(b, axis=0) + >>> np.unpackbits(p, axis=0) + array([[0, 0, 0, 0, 0, 0, 1, 0], + [0, 0, 0, 0, 0, 1, 1, 1], + [0, 0, 0, 1, 0, 1, 1, 1], + [0, 0, 0, 0, 0, 0, 0, 0], + [0, 0, 0, 0, 0, 0, 0, 0], + [0, 0, 0, 0, 0, 0, 0, 0], + [0, 0, 0, 0, 0, 0, 0, 0], + [0, 0, 0, 0, 0, 0, 0, 0]], dtype=uint8) + >>> np.array_equal(b, np.unpackbits(p, axis=0, count=b.shape[0])) + True + + """ + return (a,) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.shares_memory) +def shares_memory(a, b, max_work=None): + """ + shares_memory(a, b, /, max_work=None) + + Determine if two arrays share memory. + + .. warning:: + + This function can be exponentially slow for some inputs, unless + `max_work` is set to a finite number or ``MAY_SHARE_BOUNDS``. + If in doubt, use `numpy.may_share_memory` instead. + + Parameters + ---------- + a, b : ndarray + Input arrays + max_work : int, optional + Effort to spend on solving the overlap problem (maximum number + of candidate solutions to consider). The following special + values are recognized: + + max_work=MAY_SHARE_EXACT (default) + The problem is solved exactly. In this case, the function returns + True only if there is an element shared between the arrays. Finding + the exact solution may take extremely long in some cases. + max_work=MAY_SHARE_BOUNDS + Only the memory bounds of a and b are checked. + + Raises + ------ + numpy.exceptions.TooHardError + Exceeded max_work. + + Returns + ------- + out : bool + + See Also + -------- + may_share_memory + + Examples + -------- + >>> x = np.array([1, 2, 3, 4]) + >>> np.shares_memory(x, np.array([5, 6, 7])) + False + >>> np.shares_memory(x[::2], x) + True + >>> np.shares_memory(x[::2], x[1::2]) + False + + Checking whether two arrays share memory is NP-complete, and + runtime may increase exponentially in the number of + dimensions. Hence, `max_work` should generally be set to a finite + number, as it is possible to construct examples that take + extremely long to run: + + >>> from numpy.lib.stride_tricks import as_strided + >>> x = np.zeros([192163377], dtype=np.int8) + >>> x1 = as_strided( + ... x, strides=(36674, 61119, 85569), shape=(1049, 1049, 1049)) + >>> x2 = as_strided( + ... x[64023025:], strides=(12223, 12224, 1), shape=(1049, 1049, 1)) + >>> np.shares_memory(x1, x2, max_work=1000) + Traceback (most recent call last): + ... + numpy.exceptions.TooHardError: Exceeded max_work + + Running ``np.shares_memory(x1, x2)`` without `max_work` set takes + around 1 minute for this case. It is possible to find problems + that take still significantly longer. + + """ + return (a, b) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.may_share_memory) +def may_share_memory(a, b, max_work=None): + """ + may_share_memory(a, b, /, max_work=None) + + Determine if two arrays might share memory + + A return of True does not necessarily mean that the two arrays + share any element. It just means that they *might*. + + Only the memory bounds of a and b are checked by default. + + Parameters + ---------- + a, b : ndarray + Input arrays + max_work : int, optional + Effort to spend on solving the overlap problem. See + `shares_memory` for details. Default for ``may_share_memory`` + is to do a bounds check. + + Returns + ------- + out : bool + + See Also + -------- + shares_memory + + Examples + -------- + >>> np.may_share_memory(np.array([1,2]), np.array([5,8,9])) + False + >>> x = np.zeros([3, 4]) + >>> np.may_share_memory(x[:,0], x[:,1]) + True + + """ + return (a, b) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.is_busday) +def is_busday(dates, weekmask=None, holidays=None, busdaycal=None, out=None): + """ + is_busday( + dates, + weekmask='1111100', + holidays=None, + busdaycal=None, + out=None + ) + + Calculates which of the given dates are valid days, and which are not. + + .. versionadded:: 1.7.0 + + Parameters + ---------- + dates : array_like of datetime64[D] + The array of dates to process. + weekmask : str or array_like of bool, optional + A seven-element array indicating which of Monday through Sunday are + valid days. May be specified as a length-seven list or array, like + [1,1,1,1,1,0,0]; a length-seven string, like '1111100'; or a string + like "Mon Tue Wed Thu Fri", made up of 3-character abbreviations for + weekdays, optionally separated by white space. Valid abbreviations + are: Mon Tue Wed Thu Fri Sat Sun + holidays : array_like of datetime64[D], optional + An array of dates to consider as invalid dates. They may be + specified in any order, and NaT (not-a-time) dates are ignored. + This list is saved in a normalized form that is suited for + fast calculations of valid days. + busdaycal : busdaycalendar, optional + A `busdaycalendar` object which specifies the valid days. If this + parameter is provided, neither weekmask nor holidays may be + provided. + out : array of bool, optional + If provided, this array is filled with the result. + + Returns + ------- + out : array of bool + An array with the same shape as ``dates``, containing True for + each valid day, and False for each invalid day. + + See Also + -------- + busdaycalendar : An object that specifies a custom set of valid days. + busday_offset : Applies an offset counted in valid days. + busday_count : Counts how many valid days are in a half-open date range. + + Examples + -------- + >>> # The weekdays are Friday, Saturday, and Monday + ... np.is_busday(['2011-07-01', '2011-07-02', '2011-07-18'], + ... holidays=['2011-07-01', '2011-07-04', '2011-07-17']) + array([False, False, True]) + """ + return (dates, weekmask, holidays, out) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.busday_offset) +def busday_offset(dates, offsets, roll=None, weekmask=None, holidays=None, + busdaycal=None, out=None): + """ + busday_offset( + dates, + offsets, + roll='raise', + weekmask='1111100', + holidays=None, + busdaycal=None, + out=None + ) + + First adjusts the date to fall on a valid day according to + the ``roll`` rule, then applies offsets to the given dates + counted in valid days. + + .. versionadded:: 1.7.0 + + Parameters + ---------- + dates : array_like of datetime64[D] + The array of dates to process. + offsets : array_like of int + The array of offsets, which is broadcast with ``dates``. + roll : {'raise', 'nat', 'forward', 'following', 'backward', 'preceding', \ + 'modifiedfollowing', 'modifiedpreceding'}, optional + How to treat dates that do not fall on a valid day. The default + is 'raise'. + + * 'raise' means to raise an exception for an invalid day. + * 'nat' means to return a NaT (not-a-time) for an invalid day. + * 'forward' and 'following' mean to take the first valid day + later in time. + * 'backward' and 'preceding' mean to take the first valid day + earlier in time. + * 'modifiedfollowing' means to take the first valid day + later in time unless it is across a Month boundary, in which + case to take the first valid day earlier in time. + * 'modifiedpreceding' means to take the first valid day + earlier in time unless it is across a Month boundary, in which + case to take the first valid day later in time. + weekmask : str or array_like of bool, optional + A seven-element array indicating which of Monday through Sunday are + valid days. May be specified as a length-seven list or array, like + [1,1,1,1,1,0,0]; a length-seven string, like '1111100'; or a string + like "Mon Tue Wed Thu Fri", made up of 3-character abbreviations for + weekdays, optionally separated by white space. Valid abbreviations + are: Mon Tue Wed Thu Fri Sat Sun + holidays : array_like of datetime64[D], optional + An array of dates to consider as invalid dates. They may be + specified in any order, and NaT (not-a-time) dates are ignored. + This list is saved in a normalized form that is suited for + fast calculations of valid days. + busdaycal : busdaycalendar, optional + A `busdaycalendar` object which specifies the valid days. If this + parameter is provided, neither weekmask nor holidays may be + provided. + out : array of datetime64[D], optional + If provided, this array is filled with the result. + + Returns + ------- + out : array of datetime64[D] + An array with a shape from broadcasting ``dates`` and ``offsets`` + together, containing the dates with offsets applied. + + See Also + -------- + busdaycalendar : An object that specifies a custom set of valid days. + is_busday : Returns a boolean array indicating valid days. + busday_count : Counts how many valid days are in a half-open date range. + + Examples + -------- + >>> # First business day in October 2011 (not accounting for holidays) + ... np.busday_offset('2011-10', 0, roll='forward') + numpy.datetime64('2011-10-03') + >>> # Last business day in February 2012 (not accounting for holidays) + ... np.busday_offset('2012-03', -1, roll='forward') + numpy.datetime64('2012-02-29') + >>> # Third Wednesday in January 2011 + ... np.busday_offset('2011-01', 2, roll='forward', weekmask='Wed') + numpy.datetime64('2011-01-19') + >>> # 2012 Mother's Day in Canada and the U.S. + ... np.busday_offset('2012-05', 1, roll='forward', weekmask='Sun') + numpy.datetime64('2012-05-13') + + >>> # First business day on or after a date + ... np.busday_offset('2011-03-20', 0, roll='forward') + numpy.datetime64('2011-03-21') + >>> np.busday_offset('2011-03-22', 0, roll='forward') + numpy.datetime64('2011-03-22') + >>> # First business day after a date + ... np.busday_offset('2011-03-20', 1, roll='backward') + numpy.datetime64('2011-03-21') + >>> np.busday_offset('2011-03-22', 1, roll='backward') + numpy.datetime64('2011-03-23') + """ + return (dates, offsets, weekmask, holidays, out) + + +@array_function_from_c_func_and_dispatcher(_multiarray_umath.busday_count) +def busday_count(begindates, enddates, weekmask=None, holidays=None, + busdaycal=None, out=None): + """ + busday_count( + begindates, + enddates, + weekmask='1111100', + holidays=[], + busdaycal=None, + out=None + ) + + Counts the number of valid days between `begindates` and + `enddates`, not including the day of `enddates`. + + If ``enddates`` specifies a date value that is earlier than the + corresponding ``begindates`` date value, the count will be negative. + + .. versionadded:: 1.7.0 + + Parameters + ---------- + begindates : array_like of datetime64[D] + The array of the first dates for counting. + enddates : array_like of datetime64[D] + The array of the end dates for counting, which are excluded + from the count themselves. + weekmask : str or array_like of bool, optional + A seven-element array indicating which of Monday through Sunday are + valid days. May be specified as a length-seven list or array, like + [1,1,1,1,1,0,0]; a length-seven string, like '1111100'; or a string + like "Mon Tue Wed Thu Fri", made up of 3-character abbreviations for + weekdays, optionally separated by white space. Valid abbreviations + are: Mon Tue Wed Thu Fri Sat Sun + holidays : array_like of datetime64[D], optional + An array of dates to consider as invalid dates. They may be + specified in any order, and NaT (not-a-time) dates are ignored. + This list is saved in a normalized form that is suited for + fast calculations of valid days. + busdaycal : busdaycalendar, optional + A `busdaycalendar` object which specifies the valid days. If this + parameter is provided, neither weekmask nor holidays may be + provided. + out : array of int, optional + If provided, this array is filled with the result. + + Returns + ------- + out : array of int + An array with a shape from broadcasting ``begindates`` and ``enddates`` + together, containing the number of valid days between + the begin and end dates. + + See Also + -------- + busdaycalendar : An object that specifies a custom set of valid days. + is_busday : Returns a boolean array indicating valid days. + busday_offset : Applies an offset counted in valid days. + + Examples + -------- + >>> # Number of weekdays in January 2011 + ... np.busday_count('2011-01', '2011-02') + 21 + >>> # Number of weekdays in 2011 + >>> np.busday_count('2011', '2012') + 260 + >>> # Number of Saturdays in 2011 + ... np.busday_count('2011', '2012', weekmask='Sat') + 53 + """ + return (begindates, enddates, weekmask, holidays, out) + + +@array_function_from_c_func_and_dispatcher( + _multiarray_umath.datetime_as_string) +def datetime_as_string(arr, unit=None, timezone=None, casting=None): + """ + datetime_as_string(arr, unit=None, timezone='naive', casting='same_kind') + + Convert an array of datetimes into an array of strings. + + Parameters + ---------- + arr : array_like of datetime64 + The array of UTC timestamps to format. + unit : str + One of None, 'auto', or + a :ref:`datetime unit `. + timezone : {'naive', 'UTC', 'local'} or tzinfo + Timezone information to use when displaying the datetime. If 'UTC', + end with a Z to indicate UTC time. If 'local', convert to the local + timezone first, and suffix with a +-#### timezone offset. If a tzinfo + object, then do as with 'local', but use the specified timezone. + casting : {'no', 'equiv', 'safe', 'same_kind', 'unsafe'} + Casting to allow when changing between datetime units. + + Returns + ------- + str_arr : ndarray + An array of strings the same shape as `arr`. + + Examples + -------- + >>> import pytz + >>> d = np.arange('2002-10-27T04:30', 4*60, 60, dtype='M8[m]') + >>> d + array(['2002-10-27T04:30', '2002-10-27T05:30', '2002-10-27T06:30', + '2002-10-27T07:30'], dtype='datetime64[m]') + + Setting the timezone to UTC shows the same information, but with a Z suffix + + >>> np.datetime_as_string(d, timezone='UTC') + array(['2002-10-27T04:30Z', '2002-10-27T05:30Z', '2002-10-27T06:30Z', + '2002-10-27T07:30Z'], dtype='>> np.datetime_as_string(d, timezone=pytz.timezone('US/Eastern')) + array(['2002-10-27T00:30-0400', '2002-10-27T01:30-0400', + '2002-10-27T01:30-0500', '2002-10-27T02:30-0500'], dtype='>> np.datetime_as_string(d, unit='h') + array(['2002-10-27T04', '2002-10-27T05', '2002-10-27T06', '2002-10-27T07'], + dtype='>> np.datetime_as_string(d, unit='s') + array(['2002-10-27T04:30:00', '2002-10-27T05:30:00', '2002-10-27T06:30:00', + '2002-10-27T07:30:00'], dtype='>> np.datetime_as_string(d, unit='h', casting='safe') + Traceback (most recent call last): + ... + TypeError: Cannot create a datetime string as units 'h' from a NumPy + datetime with units 'm' according to the rule 'safe' + """ + return (arr,) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/multiarray.pyi b/venv/lib/python3.12/site-packages/numpy/_core/multiarray.pyi new file mode 100644 index 0000000000000000000000000000000000000000..74cc86e64e79dec40d79513059718157eafd6ffc --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/multiarray.pyi @@ -0,0 +1,1052 @@ +# TODO: Sort out any and all missing functions in this namespace +import builtins +import os +import datetime as dt +from collections.abc import Sequence, Callable, Iterable +from typing import ( + Literal as L, + Any, + overload, + TypeVar, + SupportsIndex, + final, + Final, + Protocol, + ClassVar, +) + +import numpy as np +from numpy import ( + # Re-exports + busdaycalendar as busdaycalendar, + broadcast as broadcast, + dtype as dtype, + ndarray as ndarray, + nditer as nditer, + + # The rest + ufunc, + str_, + uint8, + intp, + int_, + float64, + timedelta64, + datetime64, + generic, + unsignedinteger, + signedinteger, + floating, + complexfloating, + _OrderKACF, + _OrderCF, + _CastingKind, + _ModeKind, + _SupportsBuffer, + _IOProtocol, + _CopyMode, + _NDIterFlagsKind, + _NDIterOpFlagsKind, +) + +from numpy._typing import ( + # Shapes + _ShapeLike, + + # DTypes + DTypeLike, + _DTypeLike, + + # Arrays + NDArray, + ArrayLike, + _ArrayLike, + _SupportsArrayFunc, + _NestedSequence, + _ArrayLikeBool_co, + _ArrayLikeUInt_co, + _ArrayLikeInt_co, + _ArrayLikeFloat_co, + _ArrayLikeComplex_co, + _ArrayLikeTD64_co, + _ArrayLikeDT64_co, + _ArrayLikeObject_co, + _ArrayLikeStr_co, + _ArrayLikeBytes_co, + _ScalarLike_co, + _IntLike_co, + _FloatLike_co, + _TD64Like_co, +) + +_T_co = TypeVar("_T_co", covariant=True) +_T_contra = TypeVar("_T_contra", contravariant=True) +_SCT = TypeVar("_SCT", bound=generic) +_ArrayType = TypeVar("_ArrayType", bound=NDArray[Any]) + +# Valid time units +_UnitKind = L[ + "Y", + "M", + "D", + "h", + "m", + "s", + "ms", + "us", "μs", + "ns", + "ps", + "fs", + "as", +] +_RollKind = L[ # `raise` is deliberately excluded + "nat", + "forward", + "following", + "backward", + "preceding", + "modifiedfollowing", + "modifiedpreceding", +] + +class _SupportsLenAndGetItem(Protocol[_T_contra, _T_co]): + def __len__(self) -> int: ... + def __getitem__(self, key: _T_contra, /) -> _T_co: ... + +__all__: list[str] + +ALLOW_THREADS: Final[int] # 0 or 1 (system-specific) +BUFSIZE: L[8192] +CLIP: L[0] +WRAP: L[1] +RAISE: L[2] +MAXDIMS: L[32] +MAY_SHARE_BOUNDS: L[0] +MAY_SHARE_EXACT: L[-1] +tracemalloc_domain: L[389047] + +@overload +def empty_like( + prototype: _ArrayType, + dtype: None = ..., + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike = ..., + *, + device: None | L["cpu"] = ..., +) -> _ArrayType: ... +@overload +def empty_like( + prototype: _ArrayLike[_SCT], + dtype: None = ..., + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike = ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[_SCT]: ... +@overload +def empty_like( + prototype: object, + dtype: None = ..., + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike = ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[Any]: ... +@overload +def empty_like( + prototype: Any, + dtype: _DTypeLike[_SCT], + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike = ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[_SCT]: ... +@overload +def empty_like( + prototype: Any, + dtype: DTypeLike, + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike = ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[Any]: ... + +@overload +def array( + object: _ArrayType, + dtype: None = ..., + *, + copy: None | bool | _CopyMode = ..., + order: _OrderKACF = ..., + subok: L[True], + ndmin: int = ..., + like: None | _SupportsArrayFunc = ..., +) -> _ArrayType: ... +@overload +def array( + object: _ArrayLike[_SCT], + dtype: None = ..., + *, + copy: None | bool | _CopyMode = ..., + order: _OrderKACF = ..., + subok: bool = ..., + ndmin: int = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def array( + object: object, + dtype: None = ..., + *, + copy: None | bool | _CopyMode = ..., + order: _OrderKACF = ..., + subok: bool = ..., + ndmin: int = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... +@overload +def array( + object: Any, + dtype: _DTypeLike[_SCT], + *, + copy: None | bool | _CopyMode = ..., + order: _OrderKACF = ..., + subok: bool = ..., + ndmin: int = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def array( + object: Any, + dtype: DTypeLike, + *, + copy: None | bool | _CopyMode = ..., + order: _OrderKACF = ..., + subok: bool = ..., + ndmin: int = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def zeros( + shape: _ShapeLike, + dtype: None = ..., + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[float64]: ... +@overload +def zeros( + shape: _ShapeLike, + dtype: _DTypeLike[_SCT], + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def zeros( + shape: _ShapeLike, + dtype: DTypeLike, + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def empty( + shape: _ShapeLike, + dtype: None = ..., + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[float64]: ... +@overload +def empty( + shape: _ShapeLike, + dtype: _DTypeLike[_SCT], + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def empty( + shape: _ShapeLike, + dtype: DTypeLike, + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def unravel_index( # type: ignore[misc] + indices: _IntLike_co, + shape: _ShapeLike, + order: _OrderCF = ..., +) -> tuple[intp, ...]: ... +@overload +def unravel_index( + indices: _ArrayLikeInt_co, + shape: _ShapeLike, + order: _OrderCF = ..., +) -> tuple[NDArray[intp], ...]: ... + +@overload +def ravel_multi_index( # type: ignore[misc] + multi_index: Sequence[_IntLike_co], + dims: Sequence[SupportsIndex], + mode: _ModeKind | tuple[_ModeKind, ...] = ..., + order: _OrderCF = ..., +) -> intp: ... +@overload +def ravel_multi_index( + multi_index: Sequence[_ArrayLikeInt_co], + dims: Sequence[SupportsIndex], + mode: _ModeKind | tuple[_ModeKind, ...] = ..., + order: _OrderCF = ..., +) -> NDArray[intp]: ... + +# NOTE: Allow any sequence of array-like objects +@overload +def concatenate( # type: ignore[misc] + arrays: _ArrayLike[_SCT], + /, + axis: None | SupportsIndex = ..., + out: None = ..., + *, + dtype: None = ..., + casting: None | _CastingKind = ... +) -> NDArray[_SCT]: ... +@overload +def concatenate( # type: ignore[misc] + arrays: _SupportsLenAndGetItem[int, ArrayLike], + /, + axis: None | SupportsIndex = ..., + out: None = ..., + *, + dtype: None = ..., + casting: None | _CastingKind = ... +) -> NDArray[Any]: ... +@overload +def concatenate( # type: ignore[misc] + arrays: _SupportsLenAndGetItem[int, ArrayLike], + /, + axis: None | SupportsIndex = ..., + out: None = ..., + *, + dtype: _DTypeLike[_SCT], + casting: None | _CastingKind = ... +) -> NDArray[_SCT]: ... +@overload +def concatenate( # type: ignore[misc] + arrays: _SupportsLenAndGetItem[int, ArrayLike], + /, + axis: None | SupportsIndex = ..., + out: None = ..., + *, + dtype: DTypeLike, + casting: None | _CastingKind = ... +) -> NDArray[Any]: ... +@overload +def concatenate( + arrays: _SupportsLenAndGetItem[int, ArrayLike], + /, + axis: None | SupportsIndex = ..., + out: _ArrayType = ..., + *, + dtype: DTypeLike = ..., + casting: None | _CastingKind = ... +) -> _ArrayType: ... + +def inner( + a: ArrayLike, + b: ArrayLike, + /, +) -> Any: ... + +@overload +def where( + condition: ArrayLike, + /, +) -> tuple[NDArray[intp], ...]: ... +@overload +def where( + condition: ArrayLike, + x: ArrayLike, + y: ArrayLike, + /, +) -> NDArray[Any]: ... + +def lexsort( + keys: ArrayLike, + axis: None | SupportsIndex = ..., +) -> Any: ... + +def can_cast( + from_: ArrayLike | DTypeLike, + to: DTypeLike, + casting: None | _CastingKind = ..., +) -> bool: ... + +def min_scalar_type( + a: ArrayLike, /, +) -> dtype[Any]: ... + +def result_type( + *arrays_and_dtypes: ArrayLike | DTypeLike, +) -> dtype[Any]: ... + +@overload +def dot(a: ArrayLike, b: ArrayLike, out: None = ...) -> Any: ... +@overload +def dot(a: ArrayLike, b: ArrayLike, out: _ArrayType) -> _ArrayType: ... + +@overload +def vdot(a: _ArrayLikeBool_co, b: _ArrayLikeBool_co, /) -> np.bool: ... # type: ignore[misc] +@overload +def vdot(a: _ArrayLikeUInt_co, b: _ArrayLikeUInt_co, /) -> unsignedinteger[Any]: ... # type: ignore[misc] +@overload +def vdot(a: _ArrayLikeInt_co, b: _ArrayLikeInt_co, /) -> signedinteger[Any]: ... # type: ignore[misc] +@overload +def vdot(a: _ArrayLikeFloat_co, b: _ArrayLikeFloat_co, /) -> floating[Any]: ... # type: ignore[misc] +@overload +def vdot(a: _ArrayLikeComplex_co, b: _ArrayLikeComplex_co, /) -> complexfloating[Any, Any]: ... # type: ignore[misc] +@overload +def vdot(a: _ArrayLikeTD64_co, b: _ArrayLikeTD64_co, /) -> timedelta64: ... +@overload +def vdot(a: _ArrayLikeObject_co, b: Any, /) -> Any: ... +@overload +def vdot(a: Any, b: _ArrayLikeObject_co, /) -> Any: ... + +def bincount( + x: ArrayLike, + /, + weights: None | ArrayLike = ..., + minlength: SupportsIndex = ..., +) -> NDArray[intp]: ... + +def copyto( + dst: NDArray[Any], + src: ArrayLike, + casting: None | _CastingKind = ..., + where: None | _ArrayLikeBool_co = ..., +) -> None: ... + +def putmask( + a: NDArray[Any], + /, + mask: _ArrayLikeBool_co, + values: ArrayLike, +) -> None: ... + +def packbits( + a: _ArrayLikeInt_co, + /, + axis: None | SupportsIndex = ..., + bitorder: L["big", "little"] = ..., +) -> NDArray[uint8]: ... + +def unpackbits( + a: _ArrayLike[uint8], + /, + axis: None | SupportsIndex = ..., + count: None | SupportsIndex = ..., + bitorder: L["big", "little"] = ..., +) -> NDArray[uint8]: ... + +def shares_memory( + a: object, + b: object, + /, + max_work: None | int = ..., +) -> bool: ... + +def may_share_memory( + a: object, + b: object, + /, + max_work: None | int = ..., +) -> bool: ... + +@overload +def asarray( + a: _ArrayLike[_SCT], + dtype: None = ..., + order: _OrderKACF = ..., + *, + device: None | L["cpu"] = ..., + copy: None | bool = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def asarray( + a: object, + dtype: None = ..., + order: _OrderKACF = ..., + *, + device: None | L["cpu"] = ..., + copy: None | bool = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... +@overload +def asarray( + a: Any, + dtype: _DTypeLike[_SCT], + order: _OrderKACF = ..., + *, + device: None | L["cpu"] = ..., + copy: None | bool = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def asarray( + a: Any, + dtype: DTypeLike, + order: _OrderKACF = ..., + *, + device: None | L["cpu"] = ..., + copy: None | bool = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def asanyarray( + a: _ArrayType, # Preserve subclass-information + dtype: None = ..., + order: _OrderKACF = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> _ArrayType: ... +@overload +def asanyarray( + a: _ArrayLike[_SCT], + dtype: None = ..., + order: _OrderKACF = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def asanyarray( + a: object, + dtype: None = ..., + order: _OrderKACF = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... +@overload +def asanyarray( + a: Any, + dtype: _DTypeLike[_SCT], + order: _OrderKACF = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def asanyarray( + a: Any, + dtype: DTypeLike, + order: _OrderKACF = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def ascontiguousarray( + a: _ArrayLike[_SCT], + dtype: None = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def ascontiguousarray( + a: object, + dtype: None = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... +@overload +def ascontiguousarray( + a: Any, + dtype: _DTypeLike[_SCT], + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def ascontiguousarray( + a: Any, + dtype: DTypeLike, + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def asfortranarray( + a: _ArrayLike[_SCT], + dtype: None = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def asfortranarray( + a: object, + dtype: None = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... +@overload +def asfortranarray( + a: Any, + dtype: _DTypeLike[_SCT], + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def asfortranarray( + a: Any, + dtype: DTypeLike, + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +def promote_types(__type1: DTypeLike, __type2: DTypeLike) -> dtype[Any]: ... + +# `sep` is a de facto mandatory argument, as its default value is deprecated +@overload +def fromstring( + string: str | bytes, + dtype: None = ..., + count: SupportsIndex = ..., + *, + sep: str, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[float64]: ... +@overload +def fromstring( + string: str | bytes, + dtype: _DTypeLike[_SCT], + count: SupportsIndex = ..., + *, + sep: str, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def fromstring( + string: str | bytes, + dtype: DTypeLike, + count: SupportsIndex = ..., + *, + sep: str, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +def frompyfunc( + func: Callable[..., Any], /, + nin: SupportsIndex, + nout: SupportsIndex, + *, + identity: Any = ..., +) -> ufunc: ... + +@overload +def fromfile( + file: str | bytes | os.PathLike[Any] | _IOProtocol, + dtype: None = ..., + count: SupportsIndex = ..., + sep: str = ..., + offset: SupportsIndex = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[float64]: ... +@overload +def fromfile( + file: str | bytes | os.PathLike[Any] | _IOProtocol, + dtype: _DTypeLike[_SCT], + count: SupportsIndex = ..., + sep: str = ..., + offset: SupportsIndex = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def fromfile( + file: str | bytes | os.PathLike[Any] | _IOProtocol, + dtype: DTypeLike, + count: SupportsIndex = ..., + sep: str = ..., + offset: SupportsIndex = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def fromiter( + iter: Iterable[Any], + dtype: _DTypeLike[_SCT], + count: SupportsIndex = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def fromiter( + iter: Iterable[Any], + dtype: DTypeLike, + count: SupportsIndex = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def frombuffer( + buffer: _SupportsBuffer, + dtype: None = ..., + count: SupportsIndex = ..., + offset: SupportsIndex = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[float64]: ... +@overload +def frombuffer( + buffer: _SupportsBuffer, + dtype: _DTypeLike[_SCT], + count: SupportsIndex = ..., + offset: SupportsIndex = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def frombuffer( + buffer: _SupportsBuffer, + dtype: DTypeLike, + count: SupportsIndex = ..., + offset: SupportsIndex = ..., + *, + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def arange( # type: ignore[misc] + stop: _IntLike_co, + /, *, + dtype: None = ..., + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[signedinteger[Any]]: ... +@overload +def arange( # type: ignore[misc] + start: _IntLike_co, + stop: _IntLike_co, + step: _IntLike_co = ..., + dtype: None = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[signedinteger[Any]]: ... +@overload +def arange( # type: ignore[misc] + stop: _FloatLike_co, + /, *, + dtype: None = ..., + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[floating[Any]]: ... +@overload +def arange( # type: ignore[misc] + start: _FloatLike_co, + stop: _FloatLike_co, + step: _FloatLike_co = ..., + dtype: None = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[floating[Any]]: ... +@overload +def arange( + stop: _TD64Like_co, + /, *, + dtype: None = ..., + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[timedelta64]: ... +@overload +def arange( + start: _TD64Like_co, + stop: _TD64Like_co, + step: _TD64Like_co = ..., + dtype: None = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[timedelta64]: ... +@overload +def arange( # both start and stop must always be specified for datetime64 + start: datetime64, + stop: datetime64, + step: datetime64 = ..., + dtype: None = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[datetime64]: ... +@overload +def arange( + stop: Any, + /, *, + dtype: _DTypeLike[_SCT], + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def arange( + start: Any, + stop: Any, + step: Any = ..., + dtype: _DTypeLike[_SCT] = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def arange( + stop: Any, /, + *, + dtype: DTypeLike, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... +@overload +def arange( + start: Any, + stop: Any, + step: Any = ..., + dtype: DTypeLike = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +def datetime_data( + dtype: str | _DTypeLike[datetime64] | _DTypeLike[timedelta64], /, +) -> tuple[str, int]: ... + +# The datetime functions perform unsafe casts to `datetime64[D]`, +# so a lot of different argument types are allowed here + +@overload +def busday_count( # type: ignore[misc] + begindates: _ScalarLike_co | dt.date, + enddates: _ScalarLike_co | dt.date, + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: None = ..., +) -> int_: ... +@overload +def busday_count( # type: ignore[misc] + begindates: ArrayLike | dt.date | _NestedSequence[dt.date], + enddates: ArrayLike | dt.date | _NestedSequence[dt.date], + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: None = ..., +) -> NDArray[int_]: ... +@overload +def busday_count( + begindates: ArrayLike | dt.date | _NestedSequence[dt.date], + enddates: ArrayLike | dt.date | _NestedSequence[dt.date], + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: _ArrayType = ..., +) -> _ArrayType: ... + +# `roll="raise"` is (more or less?) equivalent to `casting="safe"` +@overload +def busday_offset( # type: ignore[misc] + dates: datetime64 | dt.date, + offsets: _TD64Like_co | dt.timedelta, + roll: L["raise"] = ..., + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: None = ..., +) -> datetime64: ... +@overload +def busday_offset( # type: ignore[misc] + dates: _ArrayLike[datetime64] | dt.date | _NestedSequence[dt.date], + offsets: _ArrayLikeTD64_co | dt.timedelta | _NestedSequence[dt.timedelta], + roll: L["raise"] = ..., + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: None = ..., +) -> NDArray[datetime64]: ... +@overload +def busday_offset( # type: ignore[misc] + dates: _ArrayLike[datetime64] | dt.date | _NestedSequence[dt.date], + offsets: _ArrayLikeTD64_co | dt.timedelta | _NestedSequence[dt.timedelta], + roll: L["raise"] = ..., + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: _ArrayType = ..., +) -> _ArrayType: ... +@overload +def busday_offset( # type: ignore[misc] + dates: _ScalarLike_co | dt.date, + offsets: _ScalarLike_co | dt.timedelta, + roll: _RollKind, + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: None = ..., +) -> datetime64: ... +@overload +def busday_offset( # type: ignore[misc] + dates: ArrayLike | dt.date | _NestedSequence[dt.date], + offsets: ArrayLike | dt.timedelta | _NestedSequence[dt.timedelta], + roll: _RollKind, + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: None = ..., +) -> NDArray[datetime64]: ... +@overload +def busday_offset( + dates: ArrayLike | dt.date | _NestedSequence[dt.date], + offsets: ArrayLike | dt.timedelta | _NestedSequence[dt.timedelta], + roll: _RollKind, + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: _ArrayType = ..., +) -> _ArrayType: ... + +@overload +def is_busday( # type: ignore[misc] + dates: _ScalarLike_co | dt.date, + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: None = ..., +) -> np.bool: ... +@overload +def is_busday( # type: ignore[misc] + dates: ArrayLike | _NestedSequence[dt.date], + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: None = ..., +) -> NDArray[np.bool]: ... +@overload +def is_busday( + dates: ArrayLike | _NestedSequence[dt.date], + weekmask: ArrayLike = ..., + holidays: None | ArrayLike | dt.date | _NestedSequence[dt.date] = ..., + busdaycal: None | busdaycalendar = ..., + out: _ArrayType = ..., +) -> _ArrayType: ... + +@overload +def datetime_as_string( # type: ignore[misc] + arr: datetime64 | dt.date, + unit: None | L["auto"] | _UnitKind = ..., + timezone: L["naive", "UTC", "local"] | dt.tzinfo = ..., + casting: _CastingKind = ..., +) -> str_: ... +@overload +def datetime_as_string( + arr: _ArrayLikeDT64_co | _NestedSequence[dt.date], + unit: None | L["auto"] | _UnitKind = ..., + timezone: L["naive", "UTC", "local"] | dt.tzinfo = ..., + casting: _CastingKind = ..., +) -> NDArray[str_]: ... + +@overload +def compare_chararrays( + a1: _ArrayLikeStr_co, + a2: _ArrayLikeStr_co, + cmp: L["<", "<=", "==", ">=", ">", "!="], + rstrip: bool, +) -> NDArray[np.bool]: ... +@overload +def compare_chararrays( + a1: _ArrayLikeBytes_co, + a2: _ArrayLikeBytes_co, + cmp: L["<", "<=", "==", ">=", ">", "!="], + rstrip: bool, +) -> NDArray[np.bool]: ... + +def add_docstring(obj: Callable[..., Any], docstring: str, /) -> None: ... + +_GetItemKeys = L[ + "C", "CONTIGUOUS", "C_CONTIGUOUS", + "F", "FORTRAN", "F_CONTIGUOUS", + "W", "WRITEABLE", + "B", "BEHAVED", + "O", "OWNDATA", + "A", "ALIGNED", + "X", "WRITEBACKIFCOPY", + "CA", "CARRAY", + "FA", "FARRAY", + "FNC", + "FORC", +] +_SetItemKeys = L[ + "A", "ALIGNED", + "W", "WRITEABLE", + "X", "WRITEBACKIFCOPY", +] + +@final +class flagsobj: + __hash__: ClassVar[None] # type: ignore[assignment] + aligned: bool + # NOTE: deprecated + # updateifcopy: bool + writeable: bool + writebackifcopy: bool + @property + def behaved(self) -> bool: ... + @property + def c_contiguous(self) -> bool: ... + @property + def carray(self) -> bool: ... + @property + def contiguous(self) -> bool: ... + @property + def f_contiguous(self) -> bool: ... + @property + def farray(self) -> bool: ... + @property + def fnc(self) -> bool: ... + @property + def forc(self) -> bool: ... + @property + def fortran(self) -> bool: ... + @property + def num(self) -> int: ... + @property + def owndata(self) -> bool: ... + def __getitem__(self, key: _GetItemKeys) -> bool: ... + def __setitem__(self, key: _SetItemKeys, value: bool) -> None: ... + +def nested_iters( + op: ArrayLike | Sequence[ArrayLike], + axes: Sequence[Sequence[SupportsIndex]], + flags: None | Sequence[_NDIterFlagsKind] = ..., + op_flags: None | Sequence[Sequence[_NDIterOpFlagsKind]] = ..., + op_dtypes: DTypeLike | Sequence[DTypeLike] = ..., + order: _OrderKACF = ..., + casting: _CastingKind = ..., + buffersize: SupportsIndex = ..., +) -> tuple[nditer, ...]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/_core/numeric.py b/venv/lib/python3.12/site-packages/numpy/_core/numeric.py new file mode 100644 index 0000000000000000000000000000000000000000..d310b12d143f2fe9a637eb98892ba22997d6b391 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/numeric.py @@ -0,0 +1,2665 @@ +import functools +import itertools +import operator +import sys +import warnings +import numbers +import builtins +import math + +import numpy as np +from . import multiarray +from . import numerictypes as nt +from .multiarray import ( + ALLOW_THREADS, BUFSIZE, CLIP, MAXDIMS, MAY_SHARE_BOUNDS, MAY_SHARE_EXACT, + RAISE, WRAP, arange, array, asarray, asanyarray, ascontiguousarray, + asfortranarray, broadcast, can_cast, concatenate, copyto, dot, dtype, + empty, empty_like, flatiter, frombuffer, from_dlpack, fromfile, fromiter, + fromstring, inner, lexsort, matmul, may_share_memory, min_scalar_type, + ndarray, nditer, nested_iters, promote_types, putmask, result_type, + shares_memory, vdot, where, zeros, normalize_axis_index, + _get_promotion_state, _set_promotion_state +) + +from . import overrides +from . import umath +from . import shape_base +from .overrides import set_array_function_like_doc, set_module +from .umath import (multiply, invert, sin, PINF, NAN) +from . import numerictypes +from ..exceptions import AxisError +from ._ufunc_config import errstate, _no_nep50_warning + +bitwise_not = invert +ufunc = type(sin) +newaxis = None + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +__all__ = [ + 'newaxis', 'ndarray', 'flatiter', 'nditer', 'nested_iters', 'ufunc', + 'arange', 'array', 'asarray', 'asanyarray', 'ascontiguousarray', + 'asfortranarray', 'zeros', 'count_nonzero', 'empty', 'broadcast', 'dtype', + 'fromstring', 'fromfile', 'frombuffer', 'from_dlpack', 'where', + 'argwhere', 'copyto', 'concatenate', 'lexsort', 'astype', + 'can_cast', 'promote_types', 'min_scalar_type', + 'result_type', 'isfortran', 'empty_like', 'zeros_like', 'ones_like', + 'correlate', 'convolve', 'inner', 'dot', 'outer', 'vdot', 'roll', + 'rollaxis', 'moveaxis', 'cross', 'tensordot', 'little_endian', + 'fromiter', 'array_equal', 'array_equiv', 'indices', 'fromfunction', + 'isclose', 'isscalar', 'binary_repr', 'base_repr', 'ones', + 'identity', 'allclose', 'putmask', + 'flatnonzero', 'inf', 'nan', 'False_', 'True_', 'bitwise_not', + 'full', 'full_like', 'matmul', 'shares_memory', 'may_share_memory', + '_get_promotion_state', '_set_promotion_state'] + + +def _zeros_like_dispatcher( + a, dtype=None, order=None, subok=None, shape=None, *, device=None +): + return (a,) + + +@array_function_dispatch(_zeros_like_dispatcher) +def zeros_like( + a, dtype=None, order='K', subok=True, shape=None, *, device=None +): + """ + Return an array of zeros with the same shape and type as a given array. + + Parameters + ---------- + a : array_like + The shape and data-type of `a` define these same attributes of + the returned array. + dtype : data-type, optional + Overrides the data type of the result. + + .. versionadded:: 1.6.0 + order : {'C', 'F', 'A', or 'K'}, optional + Overrides the memory layout of the result. 'C' means C-order, + 'F' means F-order, 'A' means 'F' if `a` is Fortran contiguous, + 'C' otherwise. 'K' means match the layout of `a` as closely + as possible. + + .. versionadded:: 1.6.0 + subok : bool, optional. + If True, then the newly created array will use the sub-class + type of `a`, otherwise it will be a base-class array. Defaults + to True. + shape : int or sequence of ints, optional. + Overrides the shape of the result. If order='K' and the number of + dimensions is unchanged, will try to keep order, otherwise, + order='C' is implied. + + .. versionadded:: 1.17.0 + device : str, optional + The device on which to place the created array. Default: None. + For Array-API interoperability only, so must be ``"cpu"`` if passed. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : ndarray + Array of zeros with the same shape and type as `a`. + + See Also + -------- + empty_like : Return an empty array with shape and type of input. + ones_like : Return an array of ones with shape and type of input. + full_like : Return a new array with shape of input filled with value. + zeros : Return a new array setting values to zero. + + Examples + -------- + >>> x = np.arange(6) + >>> x = x.reshape((2, 3)) + >>> x + array([[0, 1, 2], + [3, 4, 5]]) + >>> np.zeros_like(x) + array([[0, 0, 0], + [0, 0, 0]]) + + >>> y = np.arange(3, dtype=float) + >>> y + array([0., 1., 2.]) + >>> np.zeros_like(y) + array([0., 0., 0.]) + + """ + res = empty_like( + a, dtype=dtype, order=order, subok=subok, shape=shape, device=device + ) + # needed instead of a 0 to get same result as zeros for string dtypes + z = zeros(1, dtype=res.dtype) + multiarray.copyto(res, z, casting='unsafe') + return res + + +@set_array_function_like_doc +@set_module('numpy') +def ones(shape, dtype=None, order='C', *, device=None, like=None): + """ + Return a new array of given shape and type, filled with ones. + + Parameters + ---------- + shape : int or sequence of ints + Shape of the new array, e.g., ``(2, 3)`` or ``2``. + dtype : data-type, optional + The desired data-type for the array, e.g., `numpy.int8`. Default is + `numpy.float64`. + order : {'C', 'F'}, optional, default: C + Whether to store multi-dimensional data in row-major + (C-style) or column-major (Fortran-style) order in + memory. + device : str, optional + The device on which to place the created array. Default: None. + For Array-API interoperability only, so must be ``"cpu"`` if passed. + + .. versionadded:: 2.0.0 + ${ARRAY_FUNCTION_LIKE} + + .. versionadded:: 1.20.0 + + Returns + ------- + out : ndarray + Array of ones with the given shape, dtype, and order. + + See Also + -------- + ones_like : Return an array of ones with shape and type of input. + empty : Return a new uninitialized array. + zeros : Return a new array setting values to zero. + full : Return a new array of given shape filled with value. + + Examples + -------- + >>> np.ones(5) + array([1., 1., 1., 1., 1.]) + + >>> np.ones((5,), dtype=int) + array([1, 1, 1, 1, 1]) + + >>> np.ones((2, 1)) + array([[1.], + [1.]]) + + >>> s = (2,2) + >>> np.ones(s) + array([[1., 1.], + [1., 1.]]) + + """ + if like is not None: + return _ones_with_like( + like, shape, dtype=dtype, order=order, device=device + ) + + a = empty(shape, dtype, order, device=device) + multiarray.copyto(a, 1, casting='unsafe') + return a + + +_ones_with_like = array_function_dispatch()(ones) + + +def _ones_like_dispatcher( + a, dtype=None, order=None, subok=None, shape=None, *, device=None +): + return (a,) + + +@array_function_dispatch(_ones_like_dispatcher) +def ones_like( + a, dtype=None, order='K', subok=True, shape=None, *, device=None +): + """ + Return an array of ones with the same shape and type as a given array. + + Parameters + ---------- + a : array_like + The shape and data-type of `a` define these same attributes of + the returned array. + dtype : data-type, optional + Overrides the data type of the result. + + .. versionadded:: 1.6.0 + order : {'C', 'F', 'A', or 'K'}, optional + Overrides the memory layout of the result. 'C' means C-order, + 'F' means F-order, 'A' means 'F' if `a` is Fortran contiguous, + 'C' otherwise. 'K' means match the layout of `a` as closely + as possible. + + .. versionadded:: 1.6.0 + subok : bool, optional. + If True, then the newly created array will use the sub-class + type of `a`, otherwise it will be a base-class array. Defaults + to True. + shape : int or sequence of ints, optional. + Overrides the shape of the result. If order='K' and the number of + dimensions is unchanged, will try to keep order, otherwise, + order='C' is implied. + + .. versionadded:: 1.17.0 + device : str, optional + The device on which to place the created array. Default: None. + For Array-API interoperability only, so must be ``"cpu"`` if passed. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : ndarray + Array of ones with the same shape and type as `a`. + + See Also + -------- + empty_like : Return an empty array with shape and type of input. + zeros_like : Return an array of zeros with shape and type of input. + full_like : Return a new array with shape of input filled with value. + ones : Return a new array setting values to one. + + Examples + -------- + >>> x = np.arange(6) + >>> x = x.reshape((2, 3)) + >>> x + array([[0, 1, 2], + [3, 4, 5]]) + >>> np.ones_like(x) + array([[1, 1, 1], + [1, 1, 1]]) + + >>> y = np.arange(3, dtype=float) + >>> y + array([0., 1., 2.]) + >>> np.ones_like(y) + array([1., 1., 1.]) + + """ + res = empty_like( + a, dtype=dtype, order=order, subok=subok, shape=shape, device=device + ) + multiarray.copyto(res, 1, casting='unsafe') + return res + + +def _full_dispatcher( + shape, fill_value, dtype=None, order=None, *, device=None, like=None +): + return(like,) + + +@set_array_function_like_doc +@set_module('numpy') +def full(shape, fill_value, dtype=None, order='C', *, device=None, like=None): + """ + Return a new array of given shape and type, filled with `fill_value`. + + Parameters + ---------- + shape : int or sequence of ints + Shape of the new array, e.g., ``(2, 3)`` or ``2``. + fill_value : scalar or array_like + Fill value. + dtype : data-type, optional + The desired data-type for the array The default, None, means + ``np.array(fill_value).dtype``. + order : {'C', 'F'}, optional + Whether to store multidimensional data in C- or Fortran-contiguous + (row- or column-wise) order in memory. + device : str, optional + The device on which to place the created array. Default: None. + For Array-API interoperability only, so must be ``"cpu"`` if passed. + + .. versionadded:: 2.0.0 + ${ARRAY_FUNCTION_LIKE} + + .. versionadded:: 1.20.0 + + Returns + ------- + out : ndarray + Array of `fill_value` with the given shape, dtype, and order. + + See Also + -------- + full_like : Return a new array with shape of input filled with value. + empty : Return a new uninitialized array. + ones : Return a new array setting values to one. + zeros : Return a new array setting values to zero. + + Examples + -------- + >>> np.full((2, 2), np.inf) + array([[inf, inf], + [inf, inf]]) + >>> np.full((2, 2), 10) + array([[10, 10], + [10, 10]]) + + >>> np.full((2, 2), [1, 2]) + array([[1, 2], + [1, 2]]) + + """ + if like is not None: + return _full_with_like( + like, shape, fill_value, dtype=dtype, order=order, device=device + ) + + if dtype is None: + fill_value = asarray(fill_value) + dtype = fill_value.dtype + a = empty(shape, dtype, order, device=device) + multiarray.copyto(a, fill_value, casting='unsafe') + return a + + +_full_with_like = array_function_dispatch()(full) + + +def _full_like_dispatcher( + a, fill_value, dtype=None, order=None, subok=None, shape=None, + *, device=None +): + return (a,) + + +@array_function_dispatch(_full_like_dispatcher) +def full_like( + a, fill_value, dtype=None, order='K', subok=True, shape=None, + *, device=None +): + """ + Return a full array with the same shape and type as a given array. + + Parameters + ---------- + a : array_like + The shape and data-type of `a` define these same attributes of + the returned array. + fill_value : array_like + Fill value. + dtype : data-type, optional + Overrides the data type of the result. + order : {'C', 'F', 'A', or 'K'}, optional + Overrides the memory layout of the result. 'C' means C-order, + 'F' means F-order, 'A' means 'F' if `a` is Fortran contiguous, + 'C' otherwise. 'K' means match the layout of `a` as closely + as possible. + subok : bool, optional. + If True, then the newly created array will use the sub-class + type of `a`, otherwise it will be a base-class array. Defaults + to True. + shape : int or sequence of ints, optional. + Overrides the shape of the result. If order='K' and the number of + dimensions is unchanged, will try to keep order, otherwise, + order='C' is implied. + + .. versionadded:: 1.17.0 + device : str, optional + The device on which to place the created array. Default: None. + For Array-API interoperability only, so must be ``"cpu"`` if passed. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : ndarray + Array of `fill_value` with the same shape and type as `a`. + + See Also + -------- + empty_like : Return an empty array with shape and type of input. + ones_like : Return an array of ones with shape and type of input. + zeros_like : Return an array of zeros with shape and type of input. + full : Return a new array of given shape filled with value. + + Examples + -------- + >>> x = np.arange(6, dtype=int) + >>> np.full_like(x, 1) + array([1, 1, 1, 1, 1, 1]) + >>> np.full_like(x, 0.1) + array([0, 0, 0, 0, 0, 0]) + >>> np.full_like(x, 0.1, dtype=np.double) + array([0.1, 0.1, 0.1, 0.1, 0.1, 0.1]) + >>> np.full_like(x, np.nan, dtype=np.double) + array([nan, nan, nan, nan, nan, nan]) + + >>> y = np.arange(6, dtype=np.double) + >>> np.full_like(y, 0.1) + array([0.1, 0.1, 0.1, 0.1, 0.1, 0.1]) + + >>> y = np.zeros([2, 2, 3], dtype=int) + >>> np.full_like(y, [0, 0, 255]) + array([[[ 0, 0, 255], + [ 0, 0, 255]], + [[ 0, 0, 255], + [ 0, 0, 255]]]) + """ + res = empty_like( + a, dtype=dtype, order=order, subok=subok, shape=shape, device=device + ) + multiarray.copyto(res, fill_value, casting='unsafe') + return res + + +def _count_nonzero_dispatcher(a, axis=None, *, keepdims=None): + return (a,) + + +@array_function_dispatch(_count_nonzero_dispatcher) +def count_nonzero(a, axis=None, *, keepdims=False): + """ + Counts the number of non-zero values in the array ``a``. + + The word "non-zero" is in reference to the Python 2.x + built-in method ``__nonzero__()`` (renamed ``__bool__()`` + in Python 3.x) of Python objects that tests an object's + "truthfulness". For example, any number is considered + truthful if it is nonzero, whereas any string is considered + truthful if it is not the empty string. Thus, this function + (recursively) counts how many elements in ``a`` (and in + sub-arrays thereof) have their ``__nonzero__()`` or ``__bool__()`` + method evaluated to ``True``. + + Parameters + ---------- + a : array_like + The array for which to count non-zeros. + axis : int or tuple, optional + Axis or tuple of axes along which to count non-zeros. + Default is None, meaning that non-zeros will be counted + along a flattened version of ``a``. + + .. versionadded:: 1.12.0 + + keepdims : bool, optional + If this is set to True, the axes that are counted are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the input array. + + .. versionadded:: 1.19.0 + + Returns + ------- + count : int or array of int + Number of non-zero values in the array along a given axis. + Otherwise, the total number of non-zero values in the array + is returned. + + See Also + -------- + nonzero : Return the coordinates of all the non-zero values. + + Examples + -------- + >>> np.count_nonzero(np.eye(4)) + 4 + >>> a = np.array([[0, 1, 7, 0], + ... [3, 0, 2, 19]]) + >>> np.count_nonzero(a) + 5 + >>> np.count_nonzero(a, axis=0) + array([1, 1, 2, 1]) + >>> np.count_nonzero(a, axis=1) + array([2, 3]) + >>> np.count_nonzero(a, axis=1, keepdims=True) + array([[2], + [3]]) + """ + if axis is None and not keepdims: + return multiarray.count_nonzero(a) + + a = asanyarray(a) + + # TODO: this works around .astype(bool) not working properly (gh-9847) + if np.issubdtype(a.dtype, np.character): + a_bool = a != a.dtype.type() + else: + a_bool = a.astype(np.bool, copy=False) + + return a_bool.sum(axis=axis, dtype=np.intp, keepdims=keepdims) + + +@set_module('numpy') +def isfortran(a): + """ + Check if the array is Fortran contiguous but *not* C contiguous. + + This function is obsolete. If you only want to check if an array is Fortran + contiguous use ``a.flags.f_contiguous`` instead. + + Parameters + ---------- + a : ndarray + Input array. + + Returns + ------- + isfortran : bool + Returns True if the array is Fortran contiguous but *not* C contiguous. + + + Examples + -------- + + np.array allows to specify whether the array is written in C-contiguous + order (last index varies the fastest), or FORTRAN-contiguous order in + memory (first index varies the fastest). + + >>> a = np.array([[1, 2, 3], [4, 5, 6]], order='C') + >>> a + array([[1, 2, 3], + [4, 5, 6]]) + >>> np.isfortran(a) + False + + >>> b = np.array([[1, 2, 3], [4, 5, 6]], order='F') + >>> b + array([[1, 2, 3], + [4, 5, 6]]) + >>> np.isfortran(b) + True + + + The transpose of a C-ordered array is a FORTRAN-ordered array. + + >>> a = np.array([[1, 2, 3], [4, 5, 6]], order='C') + >>> a + array([[1, 2, 3], + [4, 5, 6]]) + >>> np.isfortran(a) + False + >>> b = a.T + >>> b + array([[1, 4], + [2, 5], + [3, 6]]) + >>> np.isfortran(b) + True + + C-ordered arrays evaluate as False even if they are also FORTRAN-ordered. + + >>> np.isfortran(np.array([1, 2], order='F')) + False + + """ + return a.flags.fnc + + +def _argwhere_dispatcher(a): + return (a,) + + +@array_function_dispatch(_argwhere_dispatcher) +def argwhere(a): + """ + Find the indices of array elements that are non-zero, grouped by element. + + Parameters + ---------- + a : array_like + Input data. + + Returns + ------- + index_array : (N, a.ndim) ndarray + Indices of elements that are non-zero. Indices are grouped by element. + This array will have shape ``(N, a.ndim)`` where ``N`` is the number of + non-zero items. + + See Also + -------- + where, nonzero + + Notes + ----- + ``np.argwhere(a)`` is almost the same as ``np.transpose(np.nonzero(a))``, + but produces a result of the correct shape for a 0D array. + + The output of ``argwhere`` is not suitable for indexing arrays. + For this purpose use ``nonzero(a)`` instead. + + Examples + -------- + >>> x = np.arange(6).reshape(2,3) + >>> x + array([[0, 1, 2], + [3, 4, 5]]) + >>> np.argwhere(x>1) + array([[0, 2], + [1, 0], + [1, 1], + [1, 2]]) + + """ + # nonzero does not behave well on 0d, so promote to 1d + if np.ndim(a) == 0: + a = shape_base.atleast_1d(a) + # then remove the added dimension + return argwhere(a)[:, :0] + return transpose(nonzero(a)) + + +def _flatnonzero_dispatcher(a): + return (a,) + + +@array_function_dispatch(_flatnonzero_dispatcher) +def flatnonzero(a): + """ + Return indices that are non-zero in the flattened version of a. + + This is equivalent to ``np.nonzero(np.ravel(a))[0]``. + + Parameters + ---------- + a : array_like + Input data. + + Returns + ------- + res : ndarray + Output array, containing the indices of the elements of ``a.ravel()`` + that are non-zero. + + See Also + -------- + nonzero : Return the indices of the non-zero elements of the input array. + ravel : Return a 1-D array containing the elements of the input array. + + Examples + -------- + >>> x = np.arange(-2, 3) + >>> x + array([-2, -1, 0, 1, 2]) + >>> np.flatnonzero(x) + array([0, 1, 3, 4]) + + Use the indices of the non-zero elements as an index array to extract + these elements: + + >>> x.ravel()[np.flatnonzero(x)] + array([-2, -1, 1, 2]) + + """ + return np.nonzero(np.ravel(a))[0] + + +def _correlate_dispatcher(a, v, mode=None): + return (a, v) + + +@array_function_dispatch(_correlate_dispatcher) +def correlate(a, v, mode='valid'): + r""" + Cross-correlation of two 1-dimensional sequences. + + This function computes the correlation as generally defined in signal + processing texts [1]_: + + .. math:: c_k = \sum_n a_{n+k} \cdot \overline{v}_n + + with a and v sequences being zero-padded where necessary and + :math:`\overline v` denoting complex conjugation. + + Parameters + ---------- + a, v : array_like + Input sequences. + mode : {'valid', 'same', 'full'}, optional + Refer to the `convolve` docstring. Note that the default + is 'valid', unlike `convolve`, which uses 'full'. + + Returns + ------- + out : ndarray + Discrete cross-correlation of `a` and `v`. + + See Also + -------- + convolve : Discrete, linear convolution of two one-dimensional sequences. + scipy.signal.correlate : uses FFT which has superior performance + on large arrays. + + Notes + ----- + The definition of correlation above is not unique and sometimes + correlation may be defined differently. Another common definition is [1]_: + + .. math:: c'_k = \sum_n a_{n} \cdot \overline{v_{n+k}} + + which is related to :math:`c_k` by :math:`c'_k = c_{-k}`. + + `numpy.correlate` may perform slowly in large arrays (i.e. n = 1e5) + because it does not use the FFT to compute the convolution; in that case, + `scipy.signal.correlate` might be preferable. + + References + ---------- + .. [1] Wikipedia, "Cross-correlation", + https://en.wikipedia.org/wiki/Cross-correlation + + Examples + -------- + >>> np.correlate([1, 2, 3], [0, 1, 0.5]) + array([3.5]) + >>> np.correlate([1, 2, 3], [0, 1, 0.5], "same") + array([2. , 3.5, 3. ]) + >>> np.correlate([1, 2, 3], [0, 1, 0.5], "full") + array([0.5, 2. , 3.5, 3. , 0. ]) + + Using complex sequences: + + >>> np.correlate([1+1j, 2, 3-1j], [0, 1, 0.5j], 'full') + array([ 0.5-0.5j, 1.0+0.j , 1.5-1.5j, 3.0-1.j , 0.0+0.j ]) + + Note that you get the time reversed, complex conjugated result + (:math:`\overline{c_{-k}}`) when the two input sequences a and v change + places: + + >>> np.correlate([0, 1, 0.5j], [1+1j, 2, 3-1j], 'full') + array([ 0.0+0.j , 3.0+1.j , 1.5+1.5j, 1.0+0.j , 0.5+0.5j]) + + """ + return multiarray.correlate2(a, v, mode) + + +def _convolve_dispatcher(a, v, mode=None): + return (a, v) + + +@array_function_dispatch(_convolve_dispatcher) +def convolve(a, v, mode='full'): + """ + Returns the discrete, linear convolution of two one-dimensional sequences. + + The convolution operator is often seen in signal processing, where it + models the effect of a linear time-invariant system on a signal [1]_. In + probability theory, the sum of two independent random variables is + distributed according to the convolution of their individual + distributions. + + If `v` is longer than `a`, the arrays are swapped before computation. + + Parameters + ---------- + a : (N,) array_like + First one-dimensional input array. + v : (M,) array_like + Second one-dimensional input array. + mode : {'full', 'valid', 'same'}, optional + 'full': + By default, mode is 'full'. This returns the convolution + at each point of overlap, with an output shape of (N+M-1,). At + the end-points of the convolution, the signals do not overlap + completely, and boundary effects may be seen. + + 'same': + Mode 'same' returns output of length ``max(M, N)``. Boundary + effects are still visible. + + 'valid': + Mode 'valid' returns output of length + ``max(M, N) - min(M, N) + 1``. The convolution product is only given + for points where the signals overlap completely. Values outside + the signal boundary have no effect. + + Returns + ------- + out : ndarray + Discrete, linear convolution of `a` and `v`. + + See Also + -------- + scipy.signal.fftconvolve : Convolve two arrays using the Fast Fourier + Transform. + scipy.linalg.toeplitz : Used to construct the convolution operator. + polymul : Polynomial multiplication. Same output as convolve, but also + accepts poly1d objects as input. + + Notes + ----- + The discrete convolution operation is defined as + + .. math:: (a * v)_n = \\sum_{m = -\\infty}^{\\infty} a_m v_{n - m} + + It can be shown that a convolution :math:`x(t) * y(t)` in time/space + is equivalent to the multiplication :math:`X(f) Y(f)` in the Fourier + domain, after appropriate padding (padding is necessary to prevent + circular convolution). Since multiplication is more efficient (faster) + than convolution, the function `scipy.signal.fftconvolve` exploits the + FFT to calculate the convolution of large data-sets. + + References + ---------- + .. [1] Wikipedia, "Convolution", + https://en.wikipedia.org/wiki/Convolution + + Examples + -------- + Note how the convolution operator flips the second array + before "sliding" the two across one another: + + >>> np.convolve([1, 2, 3], [0, 1, 0.5]) + array([0. , 1. , 2.5, 4. , 1.5]) + + Only return the middle values of the convolution. + Contains boundary effects, where zeros are taken + into account: + + >>> np.convolve([1,2,3],[0,1,0.5], 'same') + array([1. , 2.5, 4. ]) + + The two arrays are of the same length, so there + is only one position where they completely overlap: + + >>> np.convolve([1,2,3],[0,1,0.5], 'valid') + array([2.5]) + + """ + a, v = array(a, copy=None, ndmin=1), array(v, copy=None, ndmin=1) + if (len(v) > len(a)): + a, v = v, a + if len(a) == 0: + raise ValueError('a cannot be empty') + if len(v) == 0: + raise ValueError('v cannot be empty') + return multiarray.correlate(a, v[::-1], mode) + + +def _outer_dispatcher(a, b, out=None): + return (a, b, out) + + +@array_function_dispatch(_outer_dispatcher) +def outer(a, b, out=None): + """ + Compute the outer product of two vectors. + + Given two vectors `a` and `b` of length ``M`` and ``N``, respectively, + the outer product [1]_ is:: + + [[a_0*b_0 a_0*b_1 ... a_0*b_{N-1} ] + [a_1*b_0 . + [ ... . + [a_{M-1}*b_0 a_{M-1}*b_{N-1} ]] + + Parameters + ---------- + a : (M,) array_like + First input vector. Input is flattened if + not already 1-dimensional. + b : (N,) array_like + Second input vector. Input is flattened if + not already 1-dimensional. + out : (M, N) ndarray, optional + A location where the result is stored + + .. versionadded:: 1.9.0 + + Returns + ------- + out : (M, N) ndarray + ``out[i, j] = a[i] * b[j]`` + + See also + -------- + inner + einsum : ``einsum('i,j->ij', a.ravel(), b.ravel())`` is the equivalent. + ufunc.outer : A generalization to dimensions other than 1D and other + operations. ``np.multiply.outer(a.ravel(), b.ravel())`` + is the equivalent. + linalg.outer : An Array API compatible variation of ``np.outer``, + which accepts 1-dimensional inputs only. + tensordot : ``np.tensordot(a.ravel(), b.ravel(), axes=((), ()))`` + is the equivalent. + + References + ---------- + .. [1] G. H. Golub and C. F. Van Loan, *Matrix Computations*, 3rd + ed., Baltimore, MD, Johns Hopkins University Press, 1996, + pg. 8. + + Examples + -------- + Make a (*very* coarse) grid for computing a Mandelbrot set: + + >>> rl = np.outer(np.ones((5,)), np.linspace(-2, 2, 5)) + >>> rl + array([[-2., -1., 0., 1., 2.], + [-2., -1., 0., 1., 2.], + [-2., -1., 0., 1., 2.], + [-2., -1., 0., 1., 2.], + [-2., -1., 0., 1., 2.]]) + >>> im = np.outer(1j*np.linspace(2, -2, 5), np.ones((5,))) + >>> im + array([[0.+2.j, 0.+2.j, 0.+2.j, 0.+2.j, 0.+2.j], + [0.+1.j, 0.+1.j, 0.+1.j, 0.+1.j, 0.+1.j], + [0.+0.j, 0.+0.j, 0.+0.j, 0.+0.j, 0.+0.j], + [0.-1.j, 0.-1.j, 0.-1.j, 0.-1.j, 0.-1.j], + [0.-2.j, 0.-2.j, 0.-2.j, 0.-2.j, 0.-2.j]]) + >>> grid = rl + im + >>> grid + array([[-2.+2.j, -1.+2.j, 0.+2.j, 1.+2.j, 2.+2.j], + [-2.+1.j, -1.+1.j, 0.+1.j, 1.+1.j, 2.+1.j], + [-2.+0.j, -1.+0.j, 0.+0.j, 1.+0.j, 2.+0.j], + [-2.-1.j, -1.-1.j, 0.-1.j, 1.-1.j, 2.-1.j], + [-2.-2.j, -1.-2.j, 0.-2.j, 1.-2.j, 2.-2.j]]) + + An example using a "vector" of letters: + + >>> x = np.array(['a', 'b', 'c'], dtype=object) + >>> np.outer(x, [1, 2, 3]) + array([['a', 'aa', 'aaa'], + ['b', 'bb', 'bbb'], + ['c', 'cc', 'ccc']], dtype=object) + + """ + a = asarray(a) + b = asarray(b) + return multiply(a.ravel()[:, newaxis], b.ravel()[newaxis, :], out) + + +def _tensordot_dispatcher(a, b, axes=None): + return (a, b) + + +@array_function_dispatch(_tensordot_dispatcher) +def tensordot(a, b, axes=2): + """ + Compute tensor dot product along specified axes. + + Given two tensors, `a` and `b`, and an array_like object containing + two array_like objects, ``(a_axes, b_axes)``, sum the products of + `a`'s and `b`'s elements (components) over the axes specified by + ``a_axes`` and ``b_axes``. The third argument can be a single non-negative + integer_like scalar, ``N``; if it is such, then the last ``N`` dimensions + of `a` and the first ``N`` dimensions of `b` are summed over. + + Parameters + ---------- + a, b : array_like + Tensors to "dot". + + axes : int or (2,) array_like + * integer_like + If an int N, sum over the last N axes of `a` and the first N axes + of `b` in order. The sizes of the corresponding axes must match. + * (2,) array_like + Or, a list of axes to be summed over, first sequence applying to `a`, + second to `b`. Both elements array_like must be of the same length. + + Returns + ------- + output : ndarray + The tensor dot product of the input. + + See Also + -------- + dot, einsum + + Notes + ----- + Three common use cases are: + + * ``axes = 0`` : tensor product :math:`a\\otimes b` + * ``axes = 1`` : tensor dot product :math:`a\\cdot b` + * ``axes = 2`` : (default) tensor double contraction :math:`a:b` + + When `axes` is a positive integer ``N``, the operation starts with + axis ``-N`` of `a` and axis ``0`` of `b`, and it continues through + axis ``-1`` of `a` and axis ``N-1`` of `b` (inclusive). + + When there is more than one axis to sum over - and they are not the last + (first) axes of `a` (`b`) - the argument `axes` should consist of + two sequences of the same length, with the first axis to sum over given + first in both sequences, the second axis second, and so forth. + + The shape of the result consists of the non-contracted axes of the + first tensor, followed by the non-contracted axes of the second. + + Examples + -------- + A "traditional" example: + + >>> a = np.arange(60.).reshape(3,4,5) + >>> b = np.arange(24.).reshape(4,3,2) + >>> c = np.tensordot(a,b, axes=([1,0],[0,1])) + >>> c.shape + (5, 2) + >>> c + array([[4400., 4730.], + [4532., 4874.], + [4664., 5018.], + [4796., 5162.], + [4928., 5306.]]) + >>> # A slower but equivalent way of computing the same... + >>> d = np.zeros((5,2)) + >>> for i in range(5): + ... for j in range(2): + ... for k in range(3): + ... for n in range(4): + ... d[i,j] += a[k,n,i] * b[n,k,j] + >>> c == d + array([[ True, True], + [ True, True], + [ True, True], + [ True, True], + [ True, True]]) + + An extended example taking advantage of the overloading of + and \\*: + + >>> a = np.array(range(1, 9)) + >>> a.shape = (2, 2, 2) + >>> A = np.array(('a', 'b', 'c', 'd'), dtype=object) + >>> A.shape = (2, 2) + >>> a; A + array([[[1, 2], + [3, 4]], + [[5, 6], + [7, 8]]]) + array([['a', 'b'], + ['c', 'd']], dtype=object) + + >>> np.tensordot(a, A) # third argument default is 2 for double-contraction + array(['abbcccdddd', 'aaaaabbbbbbcccccccdddddddd'], dtype=object) + + >>> np.tensordot(a, A, 1) + array([[['acc', 'bdd'], + ['aaacccc', 'bbbdddd']], + [['aaaaacccccc', 'bbbbbdddddd'], + ['aaaaaaacccccccc', 'bbbbbbbdddddddd']]], dtype=object) + + >>> np.tensordot(a, A, 0) # tensor product (result too long to incl.) + array([[[[['a', 'b'], + ['c', 'd']], + ... + + >>> np.tensordot(a, A, (0, 1)) + array([[['abbbbb', 'cddddd'], + ['aabbbbbb', 'ccdddddd']], + [['aaabbbbbbb', 'cccddddddd'], + ['aaaabbbbbbbb', 'ccccdddddddd']]], dtype=object) + + >>> np.tensordot(a, A, (2, 1)) + array([[['abb', 'cdd'], + ['aaabbbb', 'cccdddd']], + [['aaaaabbbbbb', 'cccccdddddd'], + ['aaaaaaabbbbbbbb', 'cccccccdddddddd']]], dtype=object) + + >>> np.tensordot(a, A, ((0, 1), (0, 1))) + array(['abbbcccccddddddd', 'aabbbbccccccdddddddd'], dtype=object) + + >>> np.tensordot(a, A, ((2, 1), (1, 0))) + array(['acccbbdddd', 'aaaaacccccccbbbbbbdddddddd'], dtype=object) + + """ + try: + iter(axes) + except Exception: + axes_a = list(range(-axes, 0)) + axes_b = list(range(0, axes)) + else: + axes_a, axes_b = axes + try: + na = len(axes_a) + axes_a = list(axes_a) + except TypeError: + axes_a = [axes_a] + na = 1 + try: + nb = len(axes_b) + axes_b = list(axes_b) + except TypeError: + axes_b = [axes_b] + nb = 1 + + a, b = asarray(a), asarray(b) + as_ = a.shape + nda = a.ndim + bs = b.shape + ndb = b.ndim + equal = True + if na != nb: + equal = False + else: + for k in range(na): + if as_[axes_a[k]] != bs[axes_b[k]]: + equal = False + break + if axes_a[k] < 0: + axes_a[k] += nda + if axes_b[k] < 0: + axes_b[k] += ndb + if not equal: + raise ValueError("shape-mismatch for sum") + + # Move the axes to sum over to the end of "a" + # and to the front of "b" + notin = [k for k in range(nda) if k not in axes_a] + newaxes_a = notin + axes_a + N2 = math.prod(as_[axis] for axis in axes_a) + newshape_a = (math.prod([as_[ax] for ax in notin]), N2) + olda = [as_[axis] for axis in notin] + + notin = [k for k in range(ndb) if k not in axes_b] + newaxes_b = axes_b + notin + N2 = math.prod(bs[axis] for axis in axes_b) + newshape_b = (N2, math.prod([bs[ax] for ax in notin])) + oldb = [bs[axis] for axis in notin] + + at = a.transpose(newaxes_a).reshape(newshape_a) + bt = b.transpose(newaxes_b).reshape(newshape_b) + res = dot(at, bt) + return res.reshape(olda + oldb) + + +def _roll_dispatcher(a, shift, axis=None): + return (a,) + + +@array_function_dispatch(_roll_dispatcher) +def roll(a, shift, axis=None): + """ + Roll array elements along a given axis. + + Elements that roll beyond the last position are re-introduced at + the first. + + Parameters + ---------- + a : array_like + Input array. + shift : int or tuple of ints + The number of places by which elements are shifted. If a tuple, + then `axis` must be a tuple of the same size, and each of the + given axes is shifted by the corresponding number. If an int + while `axis` is a tuple of ints, then the same value is used for + all given axes. + axis : int or tuple of ints, optional + Axis or axes along which elements are shifted. By default, the + array is flattened before shifting, after which the original + shape is restored. + + Returns + ------- + res : ndarray + Output array, with the same shape as `a`. + + See Also + -------- + rollaxis : Roll the specified axis backwards, until it lies in a + given position. + + Notes + ----- + .. versionadded:: 1.12.0 + + Supports rolling over multiple dimensions simultaneously. + + Examples + -------- + >>> x = np.arange(10) + >>> np.roll(x, 2) + array([8, 9, 0, 1, 2, 3, 4, 5, 6, 7]) + >>> np.roll(x, -2) + array([2, 3, 4, 5, 6, 7, 8, 9, 0, 1]) + + >>> x2 = np.reshape(x, (2, 5)) + >>> x2 + array([[0, 1, 2, 3, 4], + [5, 6, 7, 8, 9]]) + >>> np.roll(x2, 1) + array([[9, 0, 1, 2, 3], + [4, 5, 6, 7, 8]]) + >>> np.roll(x2, -1) + array([[1, 2, 3, 4, 5], + [6, 7, 8, 9, 0]]) + >>> np.roll(x2, 1, axis=0) + array([[5, 6, 7, 8, 9], + [0, 1, 2, 3, 4]]) + >>> np.roll(x2, -1, axis=0) + array([[5, 6, 7, 8, 9], + [0, 1, 2, 3, 4]]) + >>> np.roll(x2, 1, axis=1) + array([[4, 0, 1, 2, 3], + [9, 5, 6, 7, 8]]) + >>> np.roll(x2, -1, axis=1) + array([[1, 2, 3, 4, 0], + [6, 7, 8, 9, 5]]) + >>> np.roll(x2, (1, 1), axis=(1, 0)) + array([[9, 5, 6, 7, 8], + [4, 0, 1, 2, 3]]) + >>> np.roll(x2, (2, 1), axis=(1, 0)) + array([[8, 9, 5, 6, 7], + [3, 4, 0, 1, 2]]) + + """ + a = asanyarray(a) + if axis is None: + return roll(a.ravel(), shift, 0).reshape(a.shape) + + else: + axis = normalize_axis_tuple(axis, a.ndim, allow_duplicate=True) + broadcasted = broadcast(shift, axis) + if broadcasted.ndim > 1: + raise ValueError( + "'shift' and 'axis' should be scalars or 1D sequences") + shifts = {ax: 0 for ax in range(a.ndim)} + for sh, ax in broadcasted: + shifts[ax] += sh + + rolls = [((slice(None), slice(None)),)] * a.ndim + for ax, offset in shifts.items(): + offset %= a.shape[ax] or 1 # If `a` is empty, nothing matters. + if offset: + # (original, result), (original, result) + rolls[ax] = ((slice(None, -offset), slice(offset, None)), + (slice(-offset, None), slice(None, offset))) + + result = empty_like(a) + for indices in itertools.product(*rolls): + arr_index, res_index = zip(*indices) + result[res_index] = a[arr_index] + + return result + + +def _rollaxis_dispatcher(a, axis, start=None): + return (a,) + + +@array_function_dispatch(_rollaxis_dispatcher) +def rollaxis(a, axis, start=0): + """ + Roll the specified axis backwards, until it lies in a given position. + + This function continues to be supported for backward compatibility, but you + should prefer `moveaxis`. The `moveaxis` function was added in NumPy + 1.11. + + Parameters + ---------- + a : ndarray + Input array. + axis : int + The axis to be rolled. The positions of the other axes do not + change relative to one another. + start : int, optional + When ``start <= axis``, the axis is rolled back until it lies in + this position. When ``start > axis``, the axis is rolled until it + lies before this position. The default, 0, results in a "complete" + roll. The following table describes how negative values of ``start`` + are interpreted: + + .. table:: + :align: left + + +-------------------+----------------------+ + | ``start`` | Normalized ``start`` | + +===================+======================+ + | ``-(arr.ndim+1)`` | raise ``AxisError`` | + +-------------------+----------------------+ + | ``-arr.ndim`` | 0 | + +-------------------+----------------------+ + | |vdots| | |vdots| | + +-------------------+----------------------+ + | ``-1`` | ``arr.ndim-1`` | + +-------------------+----------------------+ + | ``0`` | ``0`` | + +-------------------+----------------------+ + | |vdots| | |vdots| | + +-------------------+----------------------+ + | ``arr.ndim`` | ``arr.ndim`` | + +-------------------+----------------------+ + | ``arr.ndim + 1`` | raise ``AxisError`` | + +-------------------+----------------------+ + + .. |vdots| unicode:: U+22EE .. Vertical Ellipsis + + Returns + ------- + res : ndarray + For NumPy >= 1.10.0 a view of `a` is always returned. For earlier + NumPy versions a view of `a` is returned only if the order of the + axes is changed, otherwise the input array is returned. + + See Also + -------- + moveaxis : Move array axes to new positions. + roll : Roll the elements of an array by a number of positions along a + given axis. + + Examples + -------- + >>> a = np.ones((3,4,5,6)) + >>> np.rollaxis(a, 3, 1).shape + (3, 6, 4, 5) + >>> np.rollaxis(a, 2).shape + (5, 3, 4, 6) + >>> np.rollaxis(a, 1, 4).shape + (3, 5, 6, 4) + + """ + n = a.ndim + axis = normalize_axis_index(axis, n) + if start < 0: + start += n + msg = "'%s' arg requires %d <= %s < %d, but %d was passed in" + if not (0 <= start < n + 1): + raise AxisError(msg % ('start', -n, 'start', n + 1, start)) + if axis < start: + # it's been removed + start -= 1 + if axis == start: + return a[...] + axes = list(range(0, n)) + axes.remove(axis) + axes.insert(start, axis) + return a.transpose(axes) + + +@set_module("numpy.lib.array_utils") +def normalize_axis_tuple(axis, ndim, argname=None, allow_duplicate=False): + """ + Normalizes an axis argument into a tuple of non-negative integer axes. + + This handles shorthands such as ``1`` and converts them to ``(1,)``, + as well as performing the handling of negative indices covered by + `normalize_axis_index`. + + By default, this forbids axes from being specified multiple times. + + Used internally by multi-axis-checking logic. + + .. versionadded:: 1.13.0 + + Parameters + ---------- + axis : int, iterable of int + The un-normalized index or indices of the axis. + ndim : int + The number of dimensions of the array that `axis` should be normalized + against. + argname : str, optional + A prefix to put before the error message, typically the name of the + argument. + allow_duplicate : bool, optional + If False, the default, disallow an axis from being specified twice. + + Returns + ------- + normalized_axes : tuple of int + The normalized axis index, such that `0 <= normalized_axis < ndim` + + Raises + ------ + AxisError + If any axis provided is out of range + ValueError + If an axis is repeated + + See also + -------- + normalize_axis_index : normalizing a single scalar axis + """ + # Optimization to speed-up the most common cases. + if type(axis) not in (tuple, list): + try: + axis = [operator.index(axis)] + except TypeError: + pass + # Going via an iterator directly is slower than via list comprehension. + axis = tuple([normalize_axis_index(ax, ndim, argname) for ax in axis]) + if not allow_duplicate and len(set(axis)) != len(axis): + if argname: + raise ValueError('repeated axis in `{}` argument'.format(argname)) + else: + raise ValueError('repeated axis') + return axis + + +def _moveaxis_dispatcher(a, source, destination): + return (a,) + + +@array_function_dispatch(_moveaxis_dispatcher) +def moveaxis(a, source, destination): + """ + Move axes of an array to new positions. + + Other axes remain in their original order. + + .. versionadded:: 1.11.0 + + Parameters + ---------- + a : np.ndarray + The array whose axes should be reordered. + source : int or sequence of int + Original positions of the axes to move. These must be unique. + destination : int or sequence of int + Destination positions for each of the original axes. These must also be + unique. + + Returns + ------- + result : np.ndarray + Array with moved axes. This array is a view of the input array. + + See Also + -------- + transpose : Permute the dimensions of an array. + swapaxes : Interchange two axes of an array. + + Examples + -------- + >>> x = np.zeros((3, 4, 5)) + >>> np.moveaxis(x, 0, -1).shape + (4, 5, 3) + >>> np.moveaxis(x, -1, 0).shape + (5, 3, 4) + + These all achieve the same result: + + >>> np.transpose(x).shape + (5, 4, 3) + >>> np.swapaxes(x, 0, -1).shape + (5, 4, 3) + >>> np.moveaxis(x, [0, 1], [-1, -2]).shape + (5, 4, 3) + >>> np.moveaxis(x, [0, 1, 2], [-1, -2, -3]).shape + (5, 4, 3) + + """ + try: + # allow duck-array types if they define transpose + transpose = a.transpose + except AttributeError: + a = asarray(a) + transpose = a.transpose + + source = normalize_axis_tuple(source, a.ndim, 'source') + destination = normalize_axis_tuple(destination, a.ndim, 'destination') + if len(source) != len(destination): + raise ValueError('`source` and `destination` arguments must have ' + 'the same number of elements') + + order = [n for n in range(a.ndim) if n not in source] + + for dest, src in sorted(zip(destination, source)): + order.insert(dest, src) + + result = transpose(order) + return result + + +def _cross_dispatcher(a, b, axisa=None, axisb=None, axisc=None, axis=None): + return (a, b) + + +@array_function_dispatch(_cross_dispatcher) +def cross(a, b, axisa=-1, axisb=-1, axisc=-1, axis=None): + """ + Return the cross product of two (arrays of) vectors. + + The cross product of `a` and `b` in :math:`R^3` is a vector perpendicular + to both `a` and `b`. If `a` and `b` are arrays of vectors, the vectors + are defined by the last axis of `a` and `b` by default, and these axes + can have dimensions 2 or 3. Where the dimension of either `a` or `b` is + 2, the third component of the input vector is assumed to be zero and the + cross product calculated accordingly. In cases where both input vectors + have dimension 2, the z-component of the cross product is returned. + + Parameters + ---------- + a : array_like + Components of the first vector(s). + b : array_like + Components of the second vector(s). + axisa : int, optional + Axis of `a` that defines the vector(s). By default, the last axis. + axisb : int, optional + Axis of `b` that defines the vector(s). By default, the last axis. + axisc : int, optional + Axis of `c` containing the cross product vector(s). Ignored if + both input vectors have dimension 2, as the return is scalar. + By default, the last axis. + axis : int, optional + If defined, the axis of `a`, `b` and `c` that defines the vector(s) + and cross product(s). Overrides `axisa`, `axisb` and `axisc`. + + Returns + ------- + c : ndarray + Vector cross product(s). + + Raises + ------ + ValueError + When the dimension of the vector(s) in `a` and/or `b` does not + equal 2 or 3. + + See Also + -------- + inner : Inner product + outer : Outer product. + linalg.cross : An Array API compatible variation of ``np.cross``, + which accepts (arrays of) 3-element vectors only. + ix_ : Construct index arrays. + + Notes + ----- + .. versionadded:: 1.9.0 + + Supports full broadcasting of the inputs. + + Dimension-2 input arrays were deprecated in 2.0.0. If you do need this + functionality, you can use:: + + def cross2d(x, y): + return x[..., 0] * y[..., 1] - x[..., 1] * y[..., 0] + + Examples + -------- + Vector cross-product. + + >>> x = [1, 2, 3] + >>> y = [4, 5, 6] + >>> np.cross(x, y) + array([-3, 6, -3]) + + One vector with dimension 2. + + >>> x = [1, 2] + >>> y = [4, 5, 6] + >>> np.cross(x, y) + array([12, -6, -3]) + + Equivalently: + + >>> x = [1, 2, 0] + >>> y = [4, 5, 6] + >>> np.cross(x, y) + array([12, -6, -3]) + + Both vectors with dimension 2. + + >>> x = [1,2] + >>> y = [4,5] + >>> np.cross(x, y) + array(-3) + + Multiple vector cross-products. Note that the direction of the cross + product vector is defined by the *right-hand rule*. + + >>> x = np.array([[1,2,3], [4,5,6]]) + >>> y = np.array([[4,5,6], [1,2,3]]) + >>> np.cross(x, y) + array([[-3, 6, -3], + [ 3, -6, 3]]) + + The orientation of `c` can be changed using the `axisc` keyword. + + >>> np.cross(x, y, axisc=0) + array([[-3, 3], + [ 6, -6], + [-3, 3]]) + + Change the vector definition of `x` and `y` using `axisa` and `axisb`. + + >>> x = np.array([[1,2,3], [4,5,6], [7, 8, 9]]) + >>> y = np.array([[7, 8, 9], [4,5,6], [1,2,3]]) + >>> np.cross(x, y) + array([[ -6, 12, -6], + [ 0, 0, 0], + [ 6, -12, 6]]) + >>> np.cross(x, y, axisa=0, axisb=0) + array([[-24, 48, -24], + [-30, 60, -30], + [-36, 72, -36]]) + + """ + if axis is not None: + axisa, axisb, axisc = (axis,) * 3 + a = asarray(a) + b = asarray(b) + + if (a.ndim < 1) or (b.ndim < 1): + raise ValueError("At least one array has zero dimension") + + # Check axisa and axisb are within bounds + axisa = normalize_axis_index(axisa, a.ndim, msg_prefix='axisa') + axisb = normalize_axis_index(axisb, b.ndim, msg_prefix='axisb') + + # Move working axis to the end of the shape + a = moveaxis(a, axisa, -1) + b = moveaxis(b, axisb, -1) + msg = ("incompatible dimensions for cross product\n" + "(dimension must be 2 or 3)") + if a.shape[-1] not in (2, 3) or b.shape[-1] not in (2, 3): + raise ValueError(msg) + if a.shape[-1] == 2 or b.shape[-1] == 2: + # Deprecated in NumPy 2.0, 2023-09-26 + warnings.warn( + "Arrays of 2-dimensional vectors are deprecated. Use arrays of " + "3-dimensional vectors instead. (deprecated in NumPy 2.0)", + DeprecationWarning, stacklevel=2 + ) + + # Create the output array + shape = broadcast(a[..., 0], b[..., 0]).shape + if a.shape[-1] == 3 or b.shape[-1] == 3: + shape += (3,) + # Check axisc is within bounds + axisc = normalize_axis_index(axisc, len(shape), msg_prefix='axisc') + dtype = promote_types(a.dtype, b.dtype) + cp = empty(shape, dtype) + + # recast arrays as dtype + a = a.astype(dtype) + b = b.astype(dtype) + + # create local aliases for readability + a0 = a[..., 0] + a1 = a[..., 1] + if a.shape[-1] == 3: + a2 = a[..., 2] + b0 = b[..., 0] + b1 = b[..., 1] + if b.shape[-1] == 3: + b2 = b[..., 2] + if cp.ndim != 0 and cp.shape[-1] == 3: + cp0 = cp[..., 0] + cp1 = cp[..., 1] + cp2 = cp[..., 2] + + if a.shape[-1] == 2: + if b.shape[-1] == 2: + # a0 * b1 - a1 * b0 + multiply(a0, b1, out=cp) + cp -= a1 * b0 + return cp + else: + assert b.shape[-1] == 3 + # cp0 = a1 * b2 - 0 (a2 = 0) + # cp1 = 0 - a0 * b2 (a2 = 0) + # cp2 = a0 * b1 - a1 * b0 + multiply(a1, b2, out=cp0) + multiply(a0, b2, out=cp1) + negative(cp1, out=cp1) + multiply(a0, b1, out=cp2) + cp2 -= a1 * b0 + else: + assert a.shape[-1] == 3 + if b.shape[-1] == 3: + # cp0 = a1 * b2 - a2 * b1 + # cp1 = a2 * b0 - a0 * b2 + # cp2 = a0 * b1 - a1 * b0 + multiply(a1, b2, out=cp0) + tmp = array(a2 * b1) + cp0 -= tmp + multiply(a2, b0, out=cp1) + multiply(a0, b2, out=tmp) + cp1 -= tmp + multiply(a0, b1, out=cp2) + multiply(a1, b0, out=tmp) + cp2 -= tmp + else: + assert b.shape[-1] == 2 + # cp0 = 0 - a2 * b1 (b2 = 0) + # cp1 = a2 * b0 - 0 (b2 = 0) + # cp2 = a0 * b1 - a1 * b0 + multiply(a2, b1, out=cp0) + negative(cp0, out=cp0) + multiply(a2, b0, out=cp1) + multiply(a0, b1, out=cp2) + cp2 -= a1 * b0 + + return moveaxis(cp, -1, axisc) + + +little_endian = (sys.byteorder == 'little') + + +@set_module('numpy') +def indices(dimensions, dtype=int, sparse=False): + """ + Return an array representing the indices of a grid. + + Compute an array where the subarrays contain index values 0, 1, ... + varying only along the corresponding axis. + + Parameters + ---------- + dimensions : sequence of ints + The shape of the grid. + dtype : dtype, optional + Data type of the result. + sparse : boolean, optional + Return a sparse representation of the grid instead of a dense + representation. Default is False. + + .. versionadded:: 1.17 + + Returns + ------- + grid : one ndarray or tuple of ndarrays + If sparse is False: + Returns one array of grid indices, + ``grid.shape = (len(dimensions),) + tuple(dimensions)``. + If sparse is True: + Returns a tuple of arrays, with + ``grid[i].shape = (1, ..., 1, dimensions[i], 1, ..., 1)`` with + dimensions[i] in the ith place + + See Also + -------- + mgrid, ogrid, meshgrid + + Notes + ----- + The output shape in the dense case is obtained by prepending the number + of dimensions in front of the tuple of dimensions, i.e. if `dimensions` + is a tuple ``(r0, ..., rN-1)`` of length ``N``, the output shape is + ``(N, r0, ..., rN-1)``. + + The subarrays ``grid[k]`` contains the N-D array of indices along the + ``k-th`` axis. Explicitly:: + + grid[k, i0, i1, ..., iN-1] = ik + + Examples + -------- + >>> grid = np.indices((2, 3)) + >>> grid.shape + (2, 2, 3) + >>> grid[0] # row indices + array([[0, 0, 0], + [1, 1, 1]]) + >>> grid[1] # column indices + array([[0, 1, 2], + [0, 1, 2]]) + + The indices can be used as an index into an array. + + >>> x = np.arange(20).reshape(5, 4) + >>> row, col = np.indices((2, 3)) + >>> x[row, col] + array([[0, 1, 2], + [4, 5, 6]]) + + Note that it would be more straightforward in the above example to + extract the required elements directly with ``x[:2, :3]``. + + If sparse is set to true, the grid will be returned in a sparse + representation. + + >>> i, j = np.indices((2, 3), sparse=True) + >>> i.shape + (2, 1) + >>> j.shape + (1, 3) + >>> i # row indices + array([[0], + [1]]) + >>> j # column indices + array([[0, 1, 2]]) + + """ + dimensions = tuple(dimensions) + N = len(dimensions) + shape = (1,)*N + if sparse: + res = tuple() + else: + res = empty((N,)+dimensions, dtype=dtype) + for i, dim in enumerate(dimensions): + idx = arange(dim, dtype=dtype).reshape( + shape[:i] + (dim,) + shape[i+1:] + ) + if sparse: + res = res + (idx,) + else: + res[i] = idx + return res + + +@set_array_function_like_doc +@set_module('numpy') +def fromfunction(function, shape, *, dtype=float, like=None, **kwargs): + """ + Construct an array by executing a function over each coordinate. + + The resulting array therefore has a value ``fn(x, y, z)`` at + coordinate ``(x, y, z)``. + + Parameters + ---------- + function : callable + The function is called with N parameters, where N is the rank of + `shape`. Each parameter represents the coordinates of the array + varying along a specific axis. For example, if `shape` + were ``(2, 2)``, then the parameters would be + ``array([[0, 0], [1, 1]])`` and ``array([[0, 1], [0, 1]])`` + shape : (N,) tuple of ints + Shape of the output array, which also determines the shape of + the coordinate arrays passed to `function`. + dtype : data-type, optional + Data-type of the coordinate arrays passed to `function`. + By default, `dtype` is float. + ${ARRAY_FUNCTION_LIKE} + + .. versionadded:: 1.20.0 + + Returns + ------- + fromfunction : any + The result of the call to `function` is passed back directly. + Therefore the shape of `fromfunction` is completely determined by + `function`. If `function` returns a scalar value, the shape of + `fromfunction` would not match the `shape` parameter. + + See Also + -------- + indices, meshgrid + + Notes + ----- + Keywords other than `dtype` and `like` are passed to `function`. + + Examples + -------- + >>> np.fromfunction(lambda i, j: i, (2, 2), dtype=float) + array([[0., 0.], + [1., 1.]]) + + >>> np.fromfunction(lambda i, j: j, (2, 2), dtype=float) + array([[0., 1.], + [0., 1.]]) + + >>> np.fromfunction(lambda i, j: i == j, (3, 3), dtype=int) + array([[ True, False, False], + [False, True, False], + [False, False, True]]) + + >>> np.fromfunction(lambda i, j: i + j, (3, 3), dtype=int) + array([[0, 1, 2], + [1, 2, 3], + [2, 3, 4]]) + + """ + if like is not None: + return _fromfunction_with_like( + like, function, shape, dtype=dtype, **kwargs) + + args = indices(shape, dtype=dtype) + return function(*args, **kwargs) + + +_fromfunction_with_like = array_function_dispatch()(fromfunction) + + +def _frombuffer(buf, dtype, shape, order): + return frombuffer(buf, dtype=dtype).reshape(shape, order=order) + + +@set_module('numpy') +def isscalar(element): + """ + Returns True if the type of `element` is a scalar type. + + Parameters + ---------- + element : any + Input argument, can be of any type and shape. + + Returns + ------- + val : bool + True if `element` is a scalar type, False if it is not. + + See Also + -------- + ndim : Get the number of dimensions of an array + + Notes + ----- + If you need a stricter way to identify a *numerical* scalar, use + ``isinstance(x, numbers.Number)``, as that returns ``False`` for most + non-numerical elements such as strings. + + In most cases ``np.ndim(x) == 0`` should be used instead of this function, + as that will also return true for 0d arrays. This is how numpy overloads + functions in the style of the ``dx`` arguments to `gradient` and + the ``bins`` argument to `histogram`. Some key differences: + + +------------------------------------+---------------+-------------------+ + | x |``isscalar(x)``|``np.ndim(x) == 0``| + +====================================+===============+===================+ + | PEP 3141 numeric objects | ``True`` | ``True`` | + | (including builtins) | | | + +------------------------------------+---------------+-------------------+ + | builtin string and buffer objects | ``True`` | ``True`` | + +------------------------------------+---------------+-------------------+ + | other builtin objects, like | ``False`` | ``True`` | + | `pathlib.Path`, `Exception`, | | | + | the result of `re.compile` | | | + +------------------------------------+---------------+-------------------+ + | third-party objects like | ``False`` | ``True`` | + | `matplotlib.figure.Figure` | | | + +------------------------------------+---------------+-------------------+ + | zero-dimensional numpy arrays | ``False`` | ``True`` | + +------------------------------------+---------------+-------------------+ + | other numpy arrays | ``False`` | ``False`` | + +------------------------------------+---------------+-------------------+ + | `list`, `tuple`, and other | ``False`` | ``False`` | + | sequence objects | | | + +------------------------------------+---------------+-------------------+ + + Examples + -------- + >>> np.isscalar(3.1) + True + >>> np.isscalar(np.array(3.1)) + False + >>> np.isscalar([3.1]) + False + >>> np.isscalar(False) + True + >>> np.isscalar('numpy') + True + + NumPy supports PEP 3141 numbers: + + >>> from fractions import Fraction + >>> np.isscalar(Fraction(5, 17)) + True + >>> from numbers import Number + >>> np.isscalar(Number()) + True + + """ + return (isinstance(element, generic) + or type(element) in ScalarType + or isinstance(element, numbers.Number)) + + +@set_module('numpy') +def binary_repr(num, width=None): + """ + Return the binary representation of the input number as a string. + + For negative numbers, if width is not given, a minus sign is added to the + front. If width is given, the two's complement of the number is + returned, with respect to that width. + + In a two's-complement system negative numbers are represented by the two's + complement of the absolute value. This is the most common method of + representing signed integers on computers [1]_. A N-bit two's-complement + system can represent every integer in the range + :math:`-2^{N-1}` to :math:`+2^{N-1}-1`. + + Parameters + ---------- + num : int + Only an integer decimal number can be used. + width : int, optional + The length of the returned string if `num` is positive, or the length + of the two's complement if `num` is negative, provided that `width` is + at least a sufficient number of bits for `num` to be represented in + the designated form. If the `width` value is insufficient, an error is + raised. + + Returns + ------- + bin : str + Binary representation of `num` or two's complement of `num`. + + See Also + -------- + base_repr: Return a string representation of a number in the given base + system. + bin: Python's built-in binary representation generator of an integer. + + Notes + ----- + `binary_repr` is equivalent to using `base_repr` with base 2, but about 25x + faster. + + References + ---------- + .. [1] Wikipedia, "Two's complement", + https://en.wikipedia.org/wiki/Two's_complement + + Examples + -------- + >>> np.binary_repr(3) + '11' + >>> np.binary_repr(-3) + '-11' + >>> np.binary_repr(3, width=4) + '0011' + + The two's complement is returned when the input number is negative and + width is specified: + + >>> np.binary_repr(-3, width=3) + '101' + >>> np.binary_repr(-3, width=5) + '11101' + + """ + def err_if_insufficient(width, binwidth): + if width is not None and width < binwidth: + raise ValueError( + f"Insufficient bit {width=} provided for {binwidth=}" + ) + + # Ensure that num is a Python integer to avoid overflow or unwanted + # casts to floating point. + num = operator.index(num) + + if num == 0: + return '0' * (width or 1) + + elif num > 0: + binary = bin(num)[2:] + binwidth = len(binary) + outwidth = (binwidth if width is None + else builtins.max(binwidth, width)) + err_if_insufficient(width, binwidth) + return binary.zfill(outwidth) + + else: + if width is None: + return '-' + bin(-num)[2:] + + else: + poswidth = len(bin(-num)[2:]) + + # See gh-8679: remove extra digit + # for numbers at boundaries. + if 2**(poswidth - 1) == -num: + poswidth -= 1 + + twocomp = 2**(poswidth + 1) + num + binary = bin(twocomp)[2:] + binwidth = len(binary) + + outwidth = builtins.max(binwidth, width) + err_if_insufficient(width, binwidth) + return '1' * (outwidth - binwidth) + binary + + +@set_module('numpy') +def base_repr(number, base=2, padding=0): + """ + Return a string representation of a number in the given base system. + + Parameters + ---------- + number : int + The value to convert. Positive and negative values are handled. + base : int, optional + Convert `number` to the `base` number system. The valid range is 2-36, + the default value is 2. + padding : int, optional + Number of zeros padded on the left. Default is 0 (no padding). + + Returns + ------- + out : str + String representation of `number` in `base` system. + + See Also + -------- + binary_repr : Faster version of `base_repr` for base 2. + + Examples + -------- + >>> np.base_repr(5) + '101' + >>> np.base_repr(6, 5) + '11' + >>> np.base_repr(7, base=5, padding=3) + '00012' + + >>> np.base_repr(10, base=16) + 'A' + >>> np.base_repr(32, base=16) + '20' + + """ + digits = '0123456789ABCDEFGHIJKLMNOPQRSTUVWXYZ' + if base > len(digits): + raise ValueError("Bases greater than 36 not handled in base_repr.") + elif base < 2: + raise ValueError("Bases less than 2 not handled in base_repr.") + + num = abs(int(number)) + res = [] + while num: + res.append(digits[num % base]) + num //= base + if padding: + res.append('0' * padding) + if number < 0: + res.append('-') + return ''.join(reversed(res or '0')) + + +# These are all essentially abbreviations +# These might wind up in a special abbreviations module + + +def _maketup(descr, val): + dt = dtype(descr) + # Place val in all scalar tuples: + fields = dt.fields + if fields is None: + return val + else: + res = [_maketup(fields[name][0], val) for name in dt.names] + return tuple(res) + + +@set_array_function_like_doc +@set_module('numpy') +def identity(n, dtype=None, *, like=None): + """ + Return the identity array. + + The identity array is a square array with ones on + the main diagonal. + + Parameters + ---------- + n : int + Number of rows (and columns) in `n` x `n` output. + dtype : data-type, optional + Data-type of the output. Defaults to ``float``. + ${ARRAY_FUNCTION_LIKE} + + .. versionadded:: 1.20.0 + + Returns + ------- + out : ndarray + `n` x `n` array with its main diagonal set to one, + and all other elements 0. + + Examples + -------- + >>> np.identity(3) + array([[1., 0., 0.], + [0., 1., 0.], + [0., 0., 1.]]) + + """ + if like is not None: + return _identity_with_like(like, n, dtype=dtype) + + from numpy import eye + return eye(n, dtype=dtype, like=like) + + +_identity_with_like = array_function_dispatch()(identity) + + +def _allclose_dispatcher(a, b, rtol=None, atol=None, equal_nan=None): + return (a, b, rtol, atol) + + +@array_function_dispatch(_allclose_dispatcher) +def allclose(a, b, rtol=1.e-5, atol=1.e-8, equal_nan=False): + """ + Returns True if two arrays are element-wise equal within a tolerance. + + The tolerance values are positive, typically very small numbers. The + relative difference (`rtol` * abs(`b`)) and the absolute difference + `atol` are added together to compare against the absolute difference + between `a` and `b`. + + .. warning:: The default `atol` is not appropriate for comparing numbers + with magnitudes much smaller than one (see Notes). + + NaNs are treated as equal if they are in the same place and if + ``equal_nan=True``. Infs are treated as equal if they are in the same + place and of the same sign in both arrays. + + Parameters + ---------- + a, b : array_like + Input arrays to compare. + rtol : array_like + The relative tolerance parameter (see Notes). + atol : array_like + The absolute tolerance parameter (see Notes). + equal_nan : bool + Whether to compare NaN's as equal. If True, NaN's in `a` will be + considered equal to NaN's in `b` in the output array. + + .. versionadded:: 1.10.0 + + Returns + ------- + allclose : bool + Returns True if the two arrays are equal within the given + tolerance; False otherwise. + + See Also + -------- + isclose, all, any, equal + + Notes + ----- + If the following equation is element-wise True, then allclose returns + True.:: + + absolute(a - b) <= (atol + rtol * absolute(b)) + + The above equation is not symmetric in `a` and `b`, so that + ``allclose(a, b)`` might be different from ``allclose(b, a)`` in + some rare cases. + + The default value of `atol` is not appropriate when the reference value + `b` has magnitude smaller than one. For example, it is unlikely that + ``a = 1e-9`` and ``b = 2e-9`` should be considered "close", yet + ``allclose(1e-9, 2e-9)`` is ``True`` with default settings. Be sure + to select `atol` for the use case at hand, especially for defining the + threshold below which a non-zero value in `a` will be considered "close" + to a very small or zero value in `b`. + + The comparison of `a` and `b` uses standard broadcasting, which + means that `a` and `b` need not have the same shape in order for + ``allclose(a, b)`` to evaluate to True. The same is true for + `equal` but not `array_equal`. + + `allclose` is not defined for non-numeric data types. + `bool` is considered a numeric data-type for this purpose. + + Examples + -------- + >>> np.allclose([1e10,1e-7], [1.00001e10,1e-8]) + False + >>> np.allclose([1e10,1e-8], [1.00001e10,1e-9]) + True + >>> np.allclose([1e10,1e-8], [1.0001e10,1e-9]) + False + >>> np.allclose([1.0, np.nan], [1.0, np.nan]) + False + >>> np.allclose([1.0, np.nan], [1.0, np.nan], equal_nan=True) + True + + """ + res = all(isclose(a, b, rtol=rtol, atol=atol, equal_nan=equal_nan)) + return builtins.bool(res) + + +def _isclose_dispatcher(a, b, rtol=None, atol=None, equal_nan=None): + return (a, b, rtol, atol) + + +@array_function_dispatch(_isclose_dispatcher) +def isclose(a, b, rtol=1.e-5, atol=1.e-8, equal_nan=False): + """ + Returns a boolean array where two arrays are element-wise equal within a + tolerance. + + The tolerance values are positive, typically very small numbers. The + relative difference (`rtol` * abs(`b`)) and the absolute difference + `atol` are added together to compare against the absolute difference + between `a` and `b`. + + .. warning:: The default `atol` is not appropriate for comparing numbers + with magnitudes much smaller than one (see Notes). + + Parameters + ---------- + a, b : array_like + Input arrays to compare. + rtol : array_like + The relative tolerance parameter (see Notes). + atol : array_like + The absolute tolerance parameter (see Notes). + equal_nan : bool + Whether to compare NaN's as equal. If True, NaN's in `a` will be + considered equal to NaN's in `b` in the output array. + + Returns + ------- + y : array_like + Returns a boolean array of where `a` and `b` are equal within the + given tolerance. If both `a` and `b` are scalars, returns a single + boolean value. + + See Also + -------- + allclose + math.isclose + + Notes + ----- + .. versionadded:: 1.7.0 + + For finite values, isclose uses the following equation to test whether + two floating point values are equivalent.:: + + absolute(a - b) <= (atol + rtol * absolute(b)) + + Unlike the built-in `math.isclose`, the above equation is not symmetric + in `a` and `b` -- it assumes `b` is the reference value -- so that + `isclose(a, b)` might be different from `isclose(b, a)`. + + The default value of `atol` is not appropriate when the reference value + `b` has magnitude smaller than one. For example, it is unlikely that + ``a = 1e-9`` and ``b = 2e-9`` should be considered "close", yet + ``isclose(1e-9, 2e-9)`` is ``True`` with default settings. Be sure + to select `atol` for the use case at hand, especially for defining the + threshold below which a non-zero value in `a` will be considered "close" + to a very small or zero value in `b`. + + `isclose` is not defined for non-numeric data types. + :class:`bool` is considered a numeric data-type for this purpose. + + Examples + -------- + >>> np.isclose([1e10,1e-7], [1.00001e10,1e-8]) + array([ True, False]) + >>> np.isclose([1e10,1e-8], [1.00001e10,1e-9]) + array([ True, True]) + >>> np.isclose([1e10,1e-8], [1.0001e10,1e-9]) + array([False, True]) + >>> np.isclose([1.0, np.nan], [1.0, np.nan]) + array([ True, False]) + >>> np.isclose([1.0, np.nan], [1.0, np.nan], equal_nan=True) + array([ True, True]) + >>> np.isclose([1e-8, 1e-7], [0.0, 0.0]) + array([ True, False]) + >>> np.isclose([1e-100, 1e-7], [0.0, 0.0], atol=0.0) + array([False, False]) + >>> np.isclose([1e-10, 1e-10], [1e-20, 0.0]) + array([ True, True]) + >>> np.isclose([1e-10, 1e-10], [1e-20, 0.999999e-10], atol=0.0) + array([False, True]) + """ + # Turn all but python scalars into arrays. + x, y, atol, rtol = ( + a if isinstance(a, (int, float, complex)) else asanyarray(a) + for a in (a, b, atol, rtol)) + + # Make sure y is an inexact type to avoid bad behavior on abs(MIN_INT). + # This will cause casting of x later. Also, make sure to allow subclasses + # (e.g., for numpy.ma). + # NOTE: We explicitly allow timedelta, which used to work. This could + # possibly be deprecated. See also gh-18286. + # timedelta works if `atol` is an integer or also a timedelta. + # Although, the default tolerances are unlikely to be useful + if (dtype := getattr(y, "dtype", None)) is not None and dtype.kind != "m": + dt = multiarray.result_type(y, 1.) + y = asanyarray(y, dtype=dt) + elif isinstance(y, int): + y = float(y) + + with errstate(invalid='ignore'), _no_nep50_warning(): + result = (less_equal(abs(x-y), atol + rtol * abs(y)) + & isfinite(y) + | (x == y)) + if equal_nan: + result |= isnan(x) & isnan(y) + + return result[()] # Flatten 0d arrays to scalars + + +def _array_equal_dispatcher(a1, a2, equal_nan=None): + return (a1, a2) + + +_no_nan_types = { + # should use np.dtype.BoolDType, but as of writing + # that fails the reloading test. + type(dtype(nt.bool)), + type(dtype(nt.int8)), + type(dtype(nt.int16)), + type(dtype(nt.int32)), + type(dtype(nt.int64)), +} + + +def _dtype_cannot_hold_nan(dtype): + return type(dtype) in _no_nan_types + + +@array_function_dispatch(_array_equal_dispatcher) +def array_equal(a1, a2, equal_nan=False): + """ + True if two arrays have the same shape and elements, False otherwise. + + Parameters + ---------- + a1, a2 : array_like + Input arrays. + equal_nan : bool + Whether to compare NaN's as equal. If the dtype of a1 and a2 is + complex, values will be considered equal if either the real or the + imaginary component of a given value is ``nan``. + + .. versionadded:: 1.19.0 + + Returns + ------- + b : bool + Returns True if the arrays are equal. + + See Also + -------- + allclose: Returns True if two arrays are element-wise equal within a + tolerance. + array_equiv: Returns True if input arrays are shape consistent and all + elements equal. + + Examples + -------- + >>> np.array_equal([1, 2], [1, 2]) + True + >>> np.array_equal(np.array([1, 2]), np.array([1, 2])) + True + >>> np.array_equal([1, 2], [1, 2, 3]) + False + >>> np.array_equal([1, 2], [1, 4]) + False + >>> a = np.array([1, np.nan]) + >>> np.array_equal(a, a) + False + >>> np.array_equal(a, a, equal_nan=True) + True + + When ``equal_nan`` is True, complex values with nan components are + considered equal if either the real *or* the imaginary components are nan. + + >>> a = np.array([1 + 1j]) + >>> b = a.copy() + >>> a.real = np.nan + >>> b.imag = np.nan + >>> np.array_equal(a, b, equal_nan=True) + True + """ + try: + a1, a2 = asarray(a1), asarray(a2) + except Exception: + return False + if a1.shape != a2.shape: + return False + if not equal_nan: + return builtins.bool((asanyarray(a1 == a2)).all()) + + if a1 is a2: + # nan will compare equal so an array will compare equal to itself. + return True + + cannot_have_nan = (_dtype_cannot_hold_nan(a1.dtype) + and _dtype_cannot_hold_nan(a2.dtype)) + if cannot_have_nan: + return builtins.bool(asarray(a1 == a2).all()) + + # Handling NaN values if equal_nan is True + a1nan, a2nan = isnan(a1), isnan(a2) + # NaN's occur at different locations + if not (a1nan == a2nan).all(): + return False + # Shapes of a1, a2 and masks are guaranteed to be consistent by this point + return builtins.bool((a1[~a1nan] == a2[~a1nan]).all()) + + +def _array_equiv_dispatcher(a1, a2): + return (a1, a2) + + +@array_function_dispatch(_array_equiv_dispatcher) +def array_equiv(a1, a2): + """ + Returns True if input arrays are shape consistent and all elements equal. + + Shape consistent means they are either the same shape, or one input array + can be broadcasted to create the same shape as the other one. + + Parameters + ---------- + a1, a2 : array_like + Input arrays. + + Returns + ------- + out : bool + True if equivalent, False otherwise. + + Examples + -------- + >>> np.array_equiv([1, 2], [1, 2]) + True + >>> np.array_equiv([1, 2], [1, 3]) + False + + Showing the shape equivalence: + + >>> np.array_equiv([1, 2], [[1, 2], [1, 2]]) + True + >>> np.array_equiv([1, 2], [[1, 2, 1, 2], [1, 2, 1, 2]]) + False + + >>> np.array_equiv([1, 2], [[1, 2], [1, 3]]) + False + + """ + try: + a1, a2 = asarray(a1), asarray(a2) + except Exception: + return False + try: + multiarray.broadcast(a1, a2) + except Exception: + return False + + return builtins.bool(asanyarray(a1 == a2).all()) + + +def _astype_dispatcher(x, dtype, /, *, copy=None): + return (x, dtype) + + +@array_function_dispatch(_astype_dispatcher) +def astype(x, dtype, /, *, copy = True): + """ + Copies an array to a specified data type. + + This function is an Array API compatible alternative to + `numpy.ndarray.astype`. + + Parameters + ---------- + x : ndarray + Input NumPy array to cast. ``array_likes`` are explicitly not + supported here. + dtype : dtype + Data type of the result. + copy : bool, optional + Specifies whether to copy an array when the specified dtype matches + the data type of the input array ``x``. If ``True``, a newly allocated + array must always be returned. If ``False`` and the specified dtype + matches the data type of the input array, the input array must be + returned; otherwise, a newly allocated array must be returned. + Defaults to ``True``. + + Returns + ------- + out : ndarray + An array having the specified data type. + + See Also + -------- + ndarray.astype + + Examples + -------- + >>> arr = np.array([1, 2, 3]); arr + array([1, 2, 3]) + >>> np.astype(arr, np.float64) + array([1., 2., 3.]) + + Non-copy case: + + >>> arr = np.array([1, 2, 3]) + >>> arr_noncpy = np.astype(arr, arr.dtype, copy=False) + >>> np.shares_memory(arr, arr_noncpy) + True + + """ + if not isinstance(x, np.ndarray): + raise TypeError( + f"Input should be a NumPy array. It is a {type(x)} instead." + ) + return x.astype(dtype, copy=copy) + + +inf = PINF +nan = NAN +False_ = nt.bool(False) +True_ = nt.bool(True) + + +def extend_all(module): + existing = set(__all__) + mall = getattr(module, '__all__') + for a in mall: + if a not in existing: + __all__.append(a) + + +from .umath import * +from .numerictypes import * +from . import fromnumeric +from .fromnumeric import * +from . import arrayprint +from .arrayprint import * +from . import _asarray +from ._asarray import * +from . import _ufunc_config +from ._ufunc_config import * +extend_all(fromnumeric) +extend_all(umath) +extend_all(numerictypes) +extend_all(arrayprint) +extend_all(_asarray) +extend_all(_ufunc_config) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/numeric.pyi b/venv/lib/python3.12/site-packages/numpy/_core/numeric.pyi new file mode 100644 index 0000000000000000000000000000000000000000..0ad6b8fcc71ab699168ffccff05f8ccddaf8915c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/numeric.pyi @@ -0,0 +1,743 @@ +import sys +from collections.abc import Callable, Sequence +from typing import ( + Any, + overload, + TypeVar, + Literal as L, + SupportsAbs, + SupportsIndex, + NoReturn, +) +if sys.version_info >= (3, 10): + from typing import TypeGuard +else: + from typing_extensions import TypeGuard + +import numpy as np +from numpy import ( + ComplexWarning as ComplexWarning, + generic, + unsignedinteger, + signedinteger, + floating, + complexfloating, + int_, + intp, + float64, + timedelta64, + object_, + _OrderKACF, + _OrderCF, +) + +from numpy._typing import ( + ArrayLike, + NDArray, + DTypeLike, + _ShapeLike, + _DTypeLike, + _ArrayLike, + _SupportsArrayFunc, + _ScalarLike_co, + _ArrayLikeBool_co, + _ArrayLikeUInt_co, + _ArrayLikeInt_co, + _ArrayLikeFloat_co, + _ArrayLikeComplex_co, + _ArrayLikeTD64_co, + _ArrayLikeObject_co, + _ArrayLikeUnknown, +) + +_T = TypeVar("_T") +_SCT = TypeVar("_SCT", bound=generic) +_ArrayType = TypeVar("_ArrayType", bound=NDArray[Any]) + +_CorrelateMode = L["valid", "same", "full"] + +__all__: list[str] + +@overload +def zeros_like( + a: _ArrayType, + dtype: None = ..., + order: _OrderKACF = ..., + subok: L[True] = ..., + shape: None = ..., + *, + device: None | L["cpu"] = ..., +) -> _ArrayType: ... +@overload +def zeros_like( + a: _ArrayLike[_SCT], + dtype: None = ..., + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike = ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[_SCT]: ... +@overload +def zeros_like( + a: object, + dtype: None = ..., + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike= ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[Any]: ... +@overload +def zeros_like( + a: Any, + dtype: _DTypeLike[_SCT], + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike= ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[_SCT]: ... +@overload +def zeros_like( + a: Any, + dtype: DTypeLike, + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike= ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[Any]: ... + +@overload +def ones( + shape: _ShapeLike, + dtype: None = ..., + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: _SupportsArrayFunc = ..., +) -> NDArray[float64]: ... +@overload +def ones( + shape: _ShapeLike, + dtype: _DTypeLike[_SCT], + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def ones( + shape: _ShapeLike, + dtype: DTypeLike, + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def ones_like( + a: _ArrayType, + dtype: None = ..., + order: _OrderKACF = ..., + subok: L[True] = ..., + shape: None = ..., + *, + device: None | L["cpu"] = ..., +) -> _ArrayType: ... +@overload +def ones_like( + a: _ArrayLike[_SCT], + dtype: None = ..., + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike = ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[_SCT]: ... +@overload +def ones_like( + a: object, + dtype: None = ..., + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike= ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[Any]: ... +@overload +def ones_like( + a: Any, + dtype: _DTypeLike[_SCT], + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike= ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[_SCT]: ... +@overload +def ones_like( + a: Any, + dtype: DTypeLike, + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike= ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[Any]: ... + +@overload +def full( + shape: _ShapeLike, + fill_value: Any, + dtype: None = ..., + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... +@overload +def full( + shape: _ShapeLike, + fill_value: Any, + dtype: _DTypeLike[_SCT], + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def full( + shape: _ShapeLike, + fill_value: Any, + dtype: DTypeLike, + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def full_like( + a: _ArrayType, + fill_value: Any, + dtype: None = ..., + order: _OrderKACF = ..., + subok: L[True] = ..., + shape: None = ..., + *, + device: None | L["cpu"] = ..., +) -> _ArrayType: ... +@overload +def full_like( + a: _ArrayLike[_SCT], + fill_value: Any, + dtype: None = ..., + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike = ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[_SCT]: ... +@overload +def full_like( + a: object, + fill_value: Any, + dtype: None = ..., + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike= ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[Any]: ... +@overload +def full_like( + a: Any, + fill_value: Any, + dtype: _DTypeLike[_SCT], + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike= ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[_SCT]: ... +@overload +def full_like( + a: Any, + fill_value: Any, + dtype: DTypeLike, + order: _OrderKACF = ..., + subok: bool = ..., + shape: None | _ShapeLike= ..., + *, + device: None | L["cpu"] = ..., +) -> NDArray[Any]: ... + +@overload +def count_nonzero( + a: ArrayLike, + axis: None = ..., + *, + keepdims: L[False] = ..., +) -> int: ... +@overload +def count_nonzero( + a: ArrayLike, + axis: _ShapeLike = ..., + *, + keepdims: bool = ..., +) -> Any: ... # TODO: np.intp or ndarray[np.intp] + +def isfortran(a: NDArray[Any] | generic) -> bool: ... + +def argwhere(a: ArrayLike) -> NDArray[intp]: ... + +def flatnonzero(a: ArrayLike) -> NDArray[intp]: ... + +@overload +def correlate( + a: _ArrayLikeUnknown, + v: _ArrayLikeUnknown, + mode: _CorrelateMode = ..., +) -> NDArray[Any]: ... +@overload +def correlate( + a: _ArrayLikeBool_co, + v: _ArrayLikeBool_co, + mode: _CorrelateMode = ..., +) -> NDArray[np.bool]: ... +@overload +def correlate( + a: _ArrayLikeUInt_co, + v: _ArrayLikeUInt_co, + mode: _CorrelateMode = ..., +) -> NDArray[unsignedinteger[Any]]: ... +@overload +def correlate( + a: _ArrayLikeInt_co, + v: _ArrayLikeInt_co, + mode: _CorrelateMode = ..., +) -> NDArray[signedinteger[Any]]: ... +@overload +def correlate( + a: _ArrayLikeFloat_co, + v: _ArrayLikeFloat_co, + mode: _CorrelateMode = ..., +) -> NDArray[floating[Any]]: ... +@overload +def correlate( + a: _ArrayLikeComplex_co, + v: _ArrayLikeComplex_co, + mode: _CorrelateMode = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def correlate( + a: _ArrayLikeTD64_co, + v: _ArrayLikeTD64_co, + mode: _CorrelateMode = ..., +) -> NDArray[timedelta64]: ... +@overload +def correlate( + a: _ArrayLikeObject_co, + v: _ArrayLikeObject_co, + mode: _CorrelateMode = ..., +) -> NDArray[object_]: ... + +@overload +def convolve( + a: _ArrayLikeUnknown, + v: _ArrayLikeUnknown, + mode: _CorrelateMode = ..., +) -> NDArray[Any]: ... +@overload +def convolve( + a: _ArrayLikeBool_co, + v: _ArrayLikeBool_co, + mode: _CorrelateMode = ..., +) -> NDArray[np.bool]: ... +@overload +def convolve( + a: _ArrayLikeUInt_co, + v: _ArrayLikeUInt_co, + mode: _CorrelateMode = ..., +) -> NDArray[unsignedinteger[Any]]: ... +@overload +def convolve( + a: _ArrayLikeInt_co, + v: _ArrayLikeInt_co, + mode: _CorrelateMode = ..., +) -> NDArray[signedinteger[Any]]: ... +@overload +def convolve( + a: _ArrayLikeFloat_co, + v: _ArrayLikeFloat_co, + mode: _CorrelateMode = ..., +) -> NDArray[floating[Any]]: ... +@overload +def convolve( + a: _ArrayLikeComplex_co, + v: _ArrayLikeComplex_co, + mode: _CorrelateMode = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def convolve( + a: _ArrayLikeTD64_co, + v: _ArrayLikeTD64_co, + mode: _CorrelateMode = ..., +) -> NDArray[timedelta64]: ... +@overload +def convolve( + a: _ArrayLikeObject_co, + v: _ArrayLikeObject_co, + mode: _CorrelateMode = ..., +) -> NDArray[object_]: ... + +@overload +def outer( + a: _ArrayLikeUnknown, + b: _ArrayLikeUnknown, + out: None = ..., +) -> NDArray[Any]: ... +@overload +def outer( + a: _ArrayLikeBool_co, + b: _ArrayLikeBool_co, + out: None = ..., +) -> NDArray[np.bool]: ... +@overload +def outer( + a: _ArrayLikeUInt_co, + b: _ArrayLikeUInt_co, + out: None = ..., +) -> NDArray[unsignedinteger[Any]]: ... +@overload +def outer( + a: _ArrayLikeInt_co, + b: _ArrayLikeInt_co, + out: None = ..., +) -> NDArray[signedinteger[Any]]: ... +@overload +def outer( + a: _ArrayLikeFloat_co, + b: _ArrayLikeFloat_co, + out: None = ..., +) -> NDArray[floating[Any]]: ... +@overload +def outer( + a: _ArrayLikeComplex_co, + b: _ArrayLikeComplex_co, + out: None = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def outer( + a: _ArrayLikeTD64_co, + b: _ArrayLikeTD64_co, + out: None = ..., +) -> NDArray[timedelta64]: ... +@overload +def outer( + a: _ArrayLikeObject_co, + b: _ArrayLikeObject_co, + out: None = ..., +) -> NDArray[object_]: ... +@overload +def outer( + a: _ArrayLikeComplex_co | _ArrayLikeTD64_co | _ArrayLikeObject_co, + b: _ArrayLikeComplex_co | _ArrayLikeTD64_co | _ArrayLikeObject_co, + out: _ArrayType, +) -> _ArrayType: ... + +@overload +def tensordot( + a: _ArrayLikeUnknown, + b: _ArrayLikeUnknown, + axes: int | tuple[_ShapeLike, _ShapeLike] = ..., +) -> NDArray[Any]: ... +@overload +def tensordot( + a: _ArrayLikeBool_co, + b: _ArrayLikeBool_co, + axes: int | tuple[_ShapeLike, _ShapeLike] = ..., +) -> NDArray[np.bool]: ... +@overload +def tensordot( + a: _ArrayLikeUInt_co, + b: _ArrayLikeUInt_co, + axes: int | tuple[_ShapeLike, _ShapeLike] = ..., +) -> NDArray[unsignedinteger[Any]]: ... +@overload +def tensordot( + a: _ArrayLikeInt_co, + b: _ArrayLikeInt_co, + axes: int | tuple[_ShapeLike, _ShapeLike] = ..., +) -> NDArray[signedinteger[Any]]: ... +@overload +def tensordot( + a: _ArrayLikeFloat_co, + b: _ArrayLikeFloat_co, + axes: int | tuple[_ShapeLike, _ShapeLike] = ..., +) -> NDArray[floating[Any]]: ... +@overload +def tensordot( + a: _ArrayLikeComplex_co, + b: _ArrayLikeComplex_co, + axes: int | tuple[_ShapeLike, _ShapeLike] = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def tensordot( + a: _ArrayLikeTD64_co, + b: _ArrayLikeTD64_co, + axes: int | tuple[_ShapeLike, _ShapeLike] = ..., +) -> NDArray[timedelta64]: ... +@overload +def tensordot( + a: _ArrayLikeObject_co, + b: _ArrayLikeObject_co, + axes: int | tuple[_ShapeLike, _ShapeLike] = ..., +) -> NDArray[object_]: ... + +@overload +def vecdot( + x1: _ArrayLikeUnknown, x2: _ArrayLikeUnknown, axis: int = ... +) -> NDArray[Any]: ... +@overload +def vecdot( + x1: _ArrayLikeBool_co, x2: _ArrayLikeBool_co, axis: int = ... +) -> NDArray[np.bool]: ... +@overload +def vecdot( + x1: _ArrayLikeUInt_co, x2: _ArrayLikeUInt_co, axis: int = ... +) -> NDArray[unsignedinteger[Any]]: ... +@overload +def vecdot( + x1: _ArrayLikeInt_co, x2: _ArrayLikeInt_co, axis: int = ... +) -> NDArray[signedinteger[Any]]: ... +@overload +def vecdot( + x1: _ArrayLikeFloat_co, x2: _ArrayLikeFloat_co, axis: int = ... +) -> NDArray[floating[Any]]: ... +@overload +def vecdot( + x1: _ArrayLikeComplex_co, x2: _ArrayLikeComplex_co, axis: int = ... +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def vecdot( + x1: _ArrayLikeTD64_co, x2: _ArrayLikeTD64_co, axis: int = ... +) -> NDArray[timedelta64]: ... +@overload +def vecdot( + x1: _ArrayLikeObject_co, x2: _ArrayLikeObject_co, axis: int = ... +) -> NDArray[object_]: ... + +@overload +def roll( + a: _ArrayLike[_SCT], + shift: _ShapeLike, + axis: None | _ShapeLike = ..., +) -> NDArray[_SCT]: ... +@overload +def roll( + a: ArrayLike, + shift: _ShapeLike, + axis: None | _ShapeLike = ..., +) -> NDArray[Any]: ... + +def rollaxis( + a: NDArray[_SCT], + axis: int, + start: int = ..., +) -> NDArray[_SCT]: ... + +def moveaxis( + a: NDArray[_SCT], + source: _ShapeLike, + destination: _ShapeLike, +) -> NDArray[_SCT]: ... + +@overload +def cross( + x1: _ArrayLikeUnknown, + x2: _ArrayLikeUnknown, + axisa: int = ..., + axisb: int = ..., + axisc: int = ..., + axis: None | int = ..., +) -> NDArray[Any]: ... +@overload +def cross( + x1: _ArrayLikeBool_co, + x2: _ArrayLikeBool_co, + axisa: int = ..., + axisb: int = ..., + axisc: int = ..., + axis: None | int = ..., +) -> NoReturn: ... +@overload +def cross( + x1: _ArrayLikeUInt_co, + x2: _ArrayLikeUInt_co, + axisa: int = ..., + axisb: int = ..., + axisc: int = ..., + axis: None | int = ..., +) -> NDArray[unsignedinteger[Any]]: ... +@overload +def cross( + x1: _ArrayLikeInt_co, + x2: _ArrayLikeInt_co, + axisa: int = ..., + axisb: int = ..., + axisc: int = ..., + axis: None | int = ..., +) -> NDArray[signedinteger[Any]]: ... +@overload +def cross( + x1: _ArrayLikeFloat_co, + x2: _ArrayLikeFloat_co, + axisa: int = ..., + axisb: int = ..., + axisc: int = ..., + axis: None | int = ..., +) -> NDArray[floating[Any]]: ... +@overload +def cross( + x1: _ArrayLikeComplex_co, + x2: _ArrayLikeComplex_co, + axisa: int = ..., + axisb: int = ..., + axisc: int = ..., + axis: None | int = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def cross( + x1: _ArrayLikeObject_co, + x2: _ArrayLikeObject_co, + axisa: int = ..., + axisb: int = ..., + axisc: int = ..., + axis: None | int = ..., +) -> NDArray[object_]: ... + +@overload +def indices( + dimensions: Sequence[int], + dtype: type[int] = ..., + sparse: L[False] = ..., +) -> NDArray[int_]: ... +@overload +def indices( + dimensions: Sequence[int], + dtype: type[int] = ..., + sparse: L[True] = ..., +) -> tuple[NDArray[int_], ...]: ... +@overload +def indices( + dimensions: Sequence[int], + dtype: _DTypeLike[_SCT], + sparse: L[False] = ..., +) -> NDArray[_SCT]: ... +@overload +def indices( + dimensions: Sequence[int], + dtype: _DTypeLike[_SCT], + sparse: L[True], +) -> tuple[NDArray[_SCT], ...]: ... +@overload +def indices( + dimensions: Sequence[int], + dtype: DTypeLike, + sparse: L[False] = ..., +) -> NDArray[Any]: ... +@overload +def indices( + dimensions: Sequence[int], + dtype: DTypeLike, + sparse: L[True], +) -> tuple[NDArray[Any], ...]: ... + +def fromfunction( + function: Callable[..., _T], + shape: Sequence[int], + *, + dtype: DTypeLike = ..., + like: _SupportsArrayFunc = ..., + **kwargs: Any, +) -> _T: ... + +def isscalar(element: object) -> TypeGuard[ + generic | bool | int | float | complex | str | bytes | memoryview +]: ... + +def binary_repr(num: SupportsIndex, width: None | int = ...) -> str: ... + +def base_repr( + number: SupportsAbs[float], + base: float = ..., + padding: SupportsIndex = ..., +) -> str: ... + +@overload +def identity( + n: int, + dtype: None = ..., + *, + like: _SupportsArrayFunc = ..., +) -> NDArray[float64]: ... +@overload +def identity( + n: int, + dtype: _DTypeLike[_SCT], + *, + like: _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def identity( + n: int, + dtype: DTypeLike, + *, + like: _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +def allclose( + a: ArrayLike, + b: ArrayLike, + rtol: ArrayLike = ..., + atol: ArrayLike = ..., + equal_nan: bool = ..., +) -> bool: ... + +@overload +def isclose( + a: _ScalarLike_co, + b: _ScalarLike_co, + rtol: ArrayLike = ..., + atol: ArrayLike = ..., + equal_nan: bool = ..., +) -> np.bool: ... +@overload +def isclose( + a: ArrayLike, + b: ArrayLike, + rtol: ArrayLike = ..., + atol: ArrayLike = ..., + equal_nan: bool = ..., +) -> NDArray[np.bool]: ... + +def array_equal(a1: ArrayLike, a2: ArrayLike, equal_nan: bool = ...) -> bool: ... + +def array_equiv(a1: ArrayLike, a2: ArrayLike) -> bool: ... + +@overload +def astype( + x: NDArray[Any], + dtype: _DTypeLike[_SCT], + copy: bool = ..., +) -> NDArray[_SCT]: ... +@overload +def astype( + x: NDArray[Any], + dtype: DTypeLike, + copy: bool = ..., +) -> NDArray[Any]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/_core/numerictypes.py b/venv/lib/python3.12/site-packages/numpy/_core/numerictypes.py new file mode 100644 index 0000000000000000000000000000000000000000..ac52cff49db205fc3e929aa4505df6b6cc36301c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/numerictypes.py @@ -0,0 +1,628 @@ +""" +numerictypes: Define the numeric type objects + +This module is designed so "from numerictypes import \\*" is safe. +Exported symbols include: + + Dictionary with all registered number types (including aliases): + sctypeDict + + Type objects (not all will be available, depends on platform): + see variable sctypes for which ones you have + + Bit-width names + + int8 int16 int32 int64 int128 + uint8 uint16 uint32 uint64 uint128 + float16 float32 float64 float96 float128 float256 + complex32 complex64 complex128 complex192 complex256 complex512 + datetime64 timedelta64 + + c-based names + + bool + + object_ + + void, str_ + + byte, ubyte, + short, ushort + intc, uintc, + intp, uintp, + int_, uint, + longlong, ulonglong, + + single, csingle, + double, cdouble, + longdouble, clongdouble, + + As part of the type-hierarchy: xx -- is bit-width + + generic + +-> bool (kind=b) + +-> number + | +-> integer + | | +-> signedinteger (intxx) (kind=i) + | | | byte + | | | short + | | | intc + | | | intp + | | | int_ + | | | longlong + | | \\-> unsignedinteger (uintxx) (kind=u) + | | ubyte + | | ushort + | | uintc + | | uintp + | | uint + | | ulonglong + | +-> inexact + | +-> floating (floatxx) (kind=f) + | | half + | | single + | | double + | | longdouble + | \\-> complexfloating (complexxx) (kind=c) + | csingle + | cdouble + | clongdouble + +-> flexible + | +-> character + | | bytes_ (kind=S) + | | str_ (kind=U) + | | + | \\-> void (kind=V) + \\-> object_ (not used much) (kind=O) + +""" +import numbers +import warnings + +from . import multiarray as ma +from .multiarray import ( + ndarray, array, dtype, datetime_data, datetime_as_string, + busday_offset, busday_count, is_busday, busdaycalendar + ) +from .._utils import set_module + +# we add more at the bottom +__all__ = [ + 'ScalarType', 'typecodes', 'issubdtype', 'datetime_data', + 'datetime_as_string', 'busday_offset', 'busday_count', + 'is_busday', 'busdaycalendar', 'isdtype' +] + +# we don't need all these imports, but we need to keep them for compatibility +# for users using np._core.numerictypes.UPPER_TABLE +from ._string_helpers import ( + english_lower, english_upper, english_capitalize, LOWER_TABLE, UPPER_TABLE +) + +from ._type_aliases import ( + sctypeDict, allTypes, sctypes +) +from ._dtype import _kind_name + +# we don't export these for import *, but we do want them accessible +# as numerictypes.bool, etc. +from builtins import bool, int, float, complex, object, str, bytes + + +# We use this later +generic = allTypes['generic'] + +genericTypeRank = ['bool', 'int8', 'uint8', 'int16', 'uint16', + 'int32', 'uint32', 'int64', 'uint64', 'int128', + 'uint128', 'float16', + 'float32', 'float64', 'float80', 'float96', 'float128', + 'float256', + 'complex32', 'complex64', 'complex128', 'complex160', + 'complex192', 'complex256', 'complex512', 'object'] + +@set_module('numpy') +def maximum_sctype(t): + """ + Return the scalar type of highest precision of the same kind as the input. + + .. deprecated:: 2.0 + Use an explicit dtype like int64 or float64 instead. + + Parameters + ---------- + t : dtype or dtype specifier + The input data type. This can be a `dtype` object or an object that + is convertible to a `dtype`. + + Returns + ------- + out : dtype + The highest precision data type of the same kind (`dtype.kind`) as `t`. + + See Also + -------- + obj2sctype, mintypecode, sctype2char + dtype + + Examples + -------- + >>> from numpy._core.numerictypes import maximum_sctype + >>> maximum_sctype(int) + + >>> maximum_sctype(np.uint8) + + >>> maximum_sctype(complex) + # may vary + + >>> maximum_sctype(str) + + + >>> maximum_sctype('i2') + + >>> maximum_sctype('f4') + # may vary + + """ + + # Deprecated in NumPy 2.0, 2023-07-11 + warnings.warn( + "`maximum_sctype` is deprecated. Use an explicit dtype like int64 " + "or float64 instead. (deprecated in NumPy 2.0)", + DeprecationWarning, + stacklevel=2 + ) + + g = obj2sctype(t) + if g is None: + return t + t = g + base = _kind_name(dtype(t)) + if base in sctypes: + return sctypes[base][-1] + else: + return t + + +@set_module('numpy') +def issctype(rep): + """ + Determines whether the given object represents a scalar data-type. + + Parameters + ---------- + rep : any + If `rep` is an instance of a scalar dtype, True is returned. If not, + False is returned. + + Returns + ------- + out : bool + Boolean result of check whether `rep` is a scalar dtype. + + See Also + -------- + issubsctype, issubdtype, obj2sctype, sctype2char + + Examples + -------- + >>> from numpy._core.numerictypes import issctype + >>> issctype(np.int32) + True + >>> issctype(list) + False + >>> issctype(1.1) + False + + Strings are also a scalar type: + + >>> issctype(np.dtype('str')) + True + + """ + if not isinstance(rep, (type, dtype)): + return False + try: + res = obj2sctype(rep) + if res and res != object_: + return True + return False + except Exception: + return False + + +@set_module('numpy') +def obj2sctype(rep, default=None): + """ + Return the scalar dtype or NumPy equivalent of Python type of an object. + + Parameters + ---------- + rep : any + The object of which the type is returned. + default : any, optional + If given, this is returned for objects whose types can not be + determined. If not given, None is returned for those objects. + + Returns + ------- + dtype : dtype or Python type + The data type of `rep`. + + See Also + -------- + sctype2char, issctype, issubsctype, issubdtype + + Examples + -------- + >>> from numpy._core.numerictypes import obj2sctype + >>> obj2sctype(np.int32) + + >>> obj2sctype(np.array([1., 2.])) + + >>> obj2sctype(np.array([1.j])) + + + >>> obj2sctype(dict) + + >>> obj2sctype('string') + + >>> obj2sctype(1, default=list) + + + """ + # prevent abstract classes being upcast + if isinstance(rep, type) and issubclass(rep, generic): + return rep + # extract dtype from arrays + if isinstance(rep, ndarray): + return rep.dtype.type + # fall back on dtype to convert + try: + res = dtype(rep) + except Exception: + return default + else: + return res.type + + +@set_module('numpy') +def issubclass_(arg1, arg2): + """ + Determine if a class is a subclass of a second class. + + `issubclass_` is equivalent to the Python built-in ``issubclass``, + except that it returns False instead of raising a TypeError if one + of the arguments is not a class. + + Parameters + ---------- + arg1 : class + Input class. True is returned if `arg1` is a subclass of `arg2`. + arg2 : class or tuple of classes. + Input class. If a tuple of classes, True is returned if `arg1` is a + subclass of any of the tuple elements. + + Returns + ------- + out : bool + Whether `arg1` is a subclass of `arg2` or not. + + See Also + -------- + issubsctype, issubdtype, issctype + + Examples + -------- + >>> np.issubclass_(np.int32, int) + False + >>> np.issubclass_(np.int32, float) + False + >>> np.issubclass_(np.float64, float) + True + + """ + try: + return issubclass(arg1, arg2) + except TypeError: + return False + + +@set_module('numpy') +def issubsctype(arg1, arg2): + """ + Determine if the first argument is a subclass of the second argument. + + Parameters + ---------- + arg1, arg2 : dtype or dtype specifier + Data-types. + + Returns + ------- + out : bool + The result. + + See Also + -------- + issctype, issubdtype, obj2sctype + + Examples + -------- + >>> from numpy._core import issubsctype + >>> issubsctype('S8', str) + False + >>> issubsctype(np.array([1]), int) + True + >>> issubsctype(np.array([1]), float) + False + + """ + return issubclass(obj2sctype(arg1), obj2sctype(arg2)) + + +class _PreprocessDTypeError(Exception): + pass + + +def _preprocess_dtype(dtype): + """ + Preprocess dtype argument by: + 1. fetching type from a data type + 2. verifying that types are built-in NumPy dtypes + """ + if isinstance(dtype, ma.dtype): + dtype = dtype.type + if isinstance(dtype, ndarray) or dtype not in allTypes.values(): + raise _PreprocessDTypeError() + return dtype + + +@set_module('numpy') +def isdtype(dtype, kind): + """ + Determine if a provided dtype is of a specified data type ``kind``. + + This function only supports built-in NumPy's data types. + Third-party dtypes are not yet supported. + + Parameters + ---------- + dtype : dtype + The input dtype. + kind : dtype or str or tuple of dtypes/strs. + dtype or dtype kind. Allowed dtype kinds are: + * ``'bool'`` : boolean kind + * ``'signed integer'`` : signed integer data types + * ``'unsigned integer'`` : unsigned integer data types + * ``'integral'`` : integer data types + * ``'real floating'`` : real-valued floating-point data types + * ``'complex floating'`` : complex floating-point data types + * ``'numeric'`` : numeric data types + + Returns + ------- + out : bool + + See Also + -------- + issubdtype + + Examples + -------- + >>> import numpy as np + >>> np.isdtype(np.float32, np.float64) + False + >>> np.isdtype(np.float32, "real floating") + True + >>> np.isdtype(np.complex128, ("real floating", "complex floating")) + True + + """ + try: + dtype = _preprocess_dtype(dtype) + except _PreprocessDTypeError: + raise TypeError( + "dtype argument must be a NumPy dtype, " + f"but it is a {type(dtype)}." + ) from None + + input_kinds = kind if isinstance(kind, tuple) else (kind,) + + processed_kinds = set() + + for kind in input_kinds: + if kind == "bool": + processed_kinds.add(allTypes["bool"]) + elif kind == "signed integer": + processed_kinds.update(sctypes["int"]) + elif kind == "unsigned integer": + processed_kinds.update(sctypes["uint"]) + elif kind == "integral": + processed_kinds.update(sctypes["int"] + sctypes["uint"]) + elif kind == "real floating": + processed_kinds.update(sctypes["float"]) + elif kind == "complex floating": + processed_kinds.update(sctypes["complex"]) + elif kind == "numeric": + processed_kinds.update( + sctypes["int"] + sctypes["uint"] + + sctypes["float"] + sctypes["complex"] + ) + elif isinstance(kind, str): + raise ValueError( + "kind argument is a string, but" + f" {repr(kind)} is not a known kind name." + ) + else: + try: + kind = _preprocess_dtype(kind) + except _PreprocessDTypeError: + raise TypeError( + "kind argument must be comprised of " + "NumPy dtypes or strings only, " + f"but is a {type(kind)}." + ) from None + processed_kinds.add(kind) + + return dtype in processed_kinds + + +@set_module('numpy') +def issubdtype(arg1, arg2): + r""" + Returns True if first argument is a typecode lower/equal in type hierarchy. + + This is like the builtin :func:`issubclass`, but for `dtype`\ s. + + Parameters + ---------- + arg1, arg2 : dtype_like + `dtype` or object coercible to one + + Returns + ------- + out : bool + + See Also + -------- + :ref:`arrays.scalars` : Overview of the numpy type hierarchy. + + Examples + -------- + `issubdtype` can be used to check the type of arrays: + + >>> ints = np.array([1, 2, 3], dtype=np.int32) + >>> np.issubdtype(ints.dtype, np.integer) + True + >>> np.issubdtype(ints.dtype, np.floating) + False + + >>> floats = np.array([1, 2, 3], dtype=np.float32) + >>> np.issubdtype(floats.dtype, np.integer) + False + >>> np.issubdtype(floats.dtype, np.floating) + True + + Similar types of different sizes are not subdtypes of each other: + + >>> np.issubdtype(np.float64, np.float32) + False + >>> np.issubdtype(np.float32, np.float64) + False + + but both are subtypes of `floating`: + + >>> np.issubdtype(np.float64, np.floating) + True + >>> np.issubdtype(np.float32, np.floating) + True + + For convenience, dtype-like objects are allowed too: + + >>> np.issubdtype('S1', np.bytes_) + True + >>> np.issubdtype('i4', np.signedinteger) + True + + """ + if not issubclass_(arg1, generic): + arg1 = dtype(arg1).type + if not issubclass_(arg2, generic): + arg2 = dtype(arg2).type + + return issubclass(arg1, arg2) + + +@set_module('numpy') +def sctype2char(sctype): + """ + Return the string representation of a scalar dtype. + + Parameters + ---------- + sctype : scalar dtype or object + If a scalar dtype, the corresponding string character is + returned. If an object, `sctype2char` tries to infer its scalar type + and then return the corresponding string character. + + Returns + ------- + typechar : str + The string character corresponding to the scalar type. + + Raises + ------ + ValueError + If `sctype` is an object for which the type can not be inferred. + + See Also + -------- + obj2sctype, issctype, issubsctype, mintypecode + + Examples + -------- + >>> from numpy._core.numerictypes import sctype2char + >>> for sctype in [np.int32, np.double, np.cdouble, np.bytes_, np.ndarray]: + ... print(sctype2char(sctype)) + l # may vary + d + D + S + O + + >>> x = np.array([1., 2-1.j]) + >>> sctype2char(x) + 'D' + >>> sctype2char(list) + 'O' + + """ + sctype = obj2sctype(sctype) + if sctype is None: + raise ValueError("unrecognized type") + if sctype not in sctypeDict.values(): + # for compatibility + raise KeyError(sctype) + return dtype(sctype).char + + +def _scalar_type_key(typ): + """A ``key`` function for `sorted`.""" + dt = dtype(typ) + return (dt.kind.lower(), dt.itemsize) + + +ScalarType = [int, float, complex, bool, bytes, str, memoryview] +ScalarType += sorted(set(sctypeDict.values()), key=_scalar_type_key) +ScalarType = tuple(ScalarType) + + +# Now add the types we've determined to this module +for key in allTypes: + globals()[key] = allTypes[key] + __all__.append(key) + +del key + +typecodes = {'Character': 'c', + 'Integer': 'bhilqnp', + 'UnsignedInteger': 'BHILQNP', + 'Float': 'efdg', + 'Complex': 'FDG', + 'AllInteger': 'bBhHiIlLqQnNpP', + 'AllFloat': 'efdgFDG', + 'Datetime': 'Mm', + 'All': '?bhilqnpBHILQNPefdgFDGSUVOMm'} + +# backwards compatibility --- deprecated name +# Formal deprecation: Numpy 1.20.0, 2020-10-19 (see numpy/__init__.py) +typeDict = sctypeDict + +def _register_types(): + numbers.Integral.register(integer) + numbers.Complex.register(inexact) + numbers.Real.register(floating) + numbers.Number.register(number) + + +_register_types() diff --git a/venv/lib/python3.12/site-packages/numpy/_core/numerictypes.pyi b/venv/lib/python3.12/site-packages/numpy/_core/numerictypes.pyi new file mode 100644 index 0000000000000000000000000000000000000000..52ab7301260453958de8bafee5350d42026d730a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/numerictypes.pyi @@ -0,0 +1,99 @@ +from typing import ( + Literal as L, + Any, + TypeVar, + TypedDict, +) + +import numpy as np +from numpy import ( + dtype, + generic, + ubyte, + ushort, + uintc, + ulong, + ulonglong, + byte, + short, + intc, + long, + longlong, + half, + single, + double, + longdouble, + csingle, + cdouble, + clongdouble, + datetime64, + timedelta64, + object_, + str_, + bytes_, + void, +) + +from numpy._core._type_aliases import ( + sctypeDict as sctypeDict, +) + +from numpy._typing import DTypeLike + +_T = TypeVar("_T") +_SCT = TypeVar("_SCT", bound=generic) + +class _TypeCodes(TypedDict): + Character: L['c'] + Integer: L['bhilqp'] + UnsignedInteger: L['BHILQP'] + Float: L['efdg'] + Complex: L['FDG'] + AllInteger: L['bBhHiIlLqQpP'] + AllFloat: L['efdgFDG'] + Datetime: L['Mm'] + All: L['?bhilqpBHILQPefdgFDGSUVOMm'] + +__all__: list[str] + +def isdtype( + dtype: dtype[Any] | type[Any], + kind: DTypeLike | tuple[DTypeLike, ...] +) -> bool: ... + +def issubdtype(arg1: DTypeLike, arg2: DTypeLike) -> bool: ... + +typecodes: _TypeCodes +ScalarType: tuple[ + type[int], + type[float], + type[complex], + type[bool], + type[bytes], + type[str], + type[memoryview], + type[np.bool], + type[csingle], + type[cdouble], + type[clongdouble], + type[half], + type[single], + type[double], + type[longdouble], + type[byte], + type[short], + type[intc], + type[long], + type[longlong], + type[timedelta64], + type[datetime64], + type[object_], + type[bytes_], + type[str_], + type[ubyte], + type[ushort], + type[uintc], + type[ulong], + type[ulonglong], + type[void], +] diff --git a/venv/lib/python3.12/site-packages/numpy/_core/overrides.py b/venv/lib/python3.12/site-packages/numpy/_core/overrides.py new file mode 100644 index 0000000000000000000000000000000000000000..6bb57c3dbf9a77d77bce4c7571553edf00f95559 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/overrides.py @@ -0,0 +1,181 @@ +"""Implementation of __array_function__ overrides from NEP-18.""" +import collections +import functools +import os + +from .._utils import set_module +from .._utils._inspect import getargspec +from numpy._core._multiarray_umath import ( + add_docstring, _get_implementing_args, _ArrayFunctionDispatcher) + + +ARRAY_FUNCTIONS = set() + +array_function_like_doc = ( + """like : array_like, optional + Reference object to allow the creation of arrays which are not + NumPy arrays. If an array-like passed in as ``like`` supports + the ``__array_function__`` protocol, the result will be defined + by it. In this case, it ensures the creation of an array object + compatible with that passed in via this argument.""" +) + +def set_array_function_like_doc(public_api): + if public_api.__doc__ is not None: + public_api.__doc__ = public_api.__doc__.replace( + "${ARRAY_FUNCTION_LIKE}", + array_function_like_doc, + ) + return public_api + + +add_docstring( + _ArrayFunctionDispatcher, + """ + Class to wrap functions with checks for __array_function__ overrides. + + All arguments are required, and can only be passed by position. + + Parameters + ---------- + dispatcher : function or None + The dispatcher function that returns a single sequence-like object + of all arguments relevant. It must have the same signature (except + the default values) as the actual implementation. + If ``None``, this is a ``like=`` dispatcher and the + ``_ArrayFunctionDispatcher`` must be called with ``like`` as the + first (additional and positional) argument. + implementation : function + Function that implements the operation on NumPy arrays without + overrides. Arguments passed calling the ``_ArrayFunctionDispatcher`` + will be forwarded to this (and the ``dispatcher``) as if using + ``*args, **kwargs``. + + Attributes + ---------- + _implementation : function + The original implementation passed in. + """) + + +# exposed for testing purposes; used internally by _ArrayFunctionDispatcher +add_docstring( + _get_implementing_args, + """ + Collect arguments on which to call __array_function__. + + Parameters + ---------- + relevant_args : iterable of array-like + Iterable of possibly array-like arguments to check for + __array_function__ methods. + + Returns + ------- + Sequence of arguments with __array_function__ methods, in the order in + which they should be called. + """) + + +ArgSpec = collections.namedtuple('ArgSpec', 'args varargs keywords defaults') + + +def verify_matching_signatures(implementation, dispatcher): + """Verify that a dispatcher function has the right signature.""" + implementation_spec = ArgSpec(*getargspec(implementation)) + dispatcher_spec = ArgSpec(*getargspec(dispatcher)) + + if (implementation_spec.args != dispatcher_spec.args or + implementation_spec.varargs != dispatcher_spec.varargs or + implementation_spec.keywords != dispatcher_spec.keywords or + (bool(implementation_spec.defaults) != + bool(dispatcher_spec.defaults)) or + (implementation_spec.defaults is not None and + len(implementation_spec.defaults) != + len(dispatcher_spec.defaults))): + raise RuntimeError('implementation and dispatcher for %s have ' + 'different function signatures' % implementation) + + if implementation_spec.defaults is not None: + if dispatcher_spec.defaults != (None,) * len(dispatcher_spec.defaults): + raise RuntimeError('dispatcher functions can only use None for ' + 'default argument values') + + +def array_function_dispatch(dispatcher=None, module=None, verify=True, + docs_from_dispatcher=False): + """Decorator for adding dispatch with the __array_function__ protocol. + + See NEP-18 for example usage. + + Parameters + ---------- + dispatcher : callable or None + Function that when called like ``dispatcher(*args, **kwargs)`` with + arguments from the NumPy function call returns an iterable of + array-like arguments to check for ``__array_function__``. + + If `None`, the first argument is used as the single `like=` argument + and not passed on. A function implementing `like=` must call its + dispatcher with `like` as the first non-keyword argument. + module : str, optional + __module__ attribute to set on new function, e.g., ``module='numpy'``. + By default, module is copied from the decorated function. + verify : bool, optional + If True, verify the that the signature of the dispatcher and decorated + function signatures match exactly: all required and optional arguments + should appear in order with the same names, but the default values for + all optional arguments should be ``None``. Only disable verification + if the dispatcher's signature needs to deviate for some particular + reason, e.g., because the function has a signature like + ``func(*args, **kwargs)``. + docs_from_dispatcher : bool, optional + If True, copy docs from the dispatcher function onto the dispatched + function, rather than from the implementation. This is useful for + functions defined in C, which otherwise don't have docstrings. + + Returns + ------- + Function suitable for decorating the implementation of a NumPy function. + + """ + def decorator(implementation): + if verify: + if dispatcher is not None: + verify_matching_signatures(implementation, dispatcher) + else: + # Using __code__ directly similar to verify_matching_signature + co = implementation.__code__ + last_arg = co.co_argcount + co.co_kwonlyargcount - 1 + last_arg = co.co_varnames[last_arg] + if last_arg != "like" or co.co_kwonlyargcount == 0: + raise RuntimeError( + "__array_function__ expects `like=` to be the last " + "argument and a keyword-only argument. " + f"{implementation} does not seem to comply.") + + if docs_from_dispatcher: + add_docstring(implementation, dispatcher.__doc__) + + public_api = _ArrayFunctionDispatcher(dispatcher, implementation) + public_api = functools.wraps(implementation)(public_api) + + if module is not None: + public_api.__module__ = module + + ARRAY_FUNCTIONS.add(public_api) + + return public_api + + return decorator + + +def array_function_from_dispatcher( + implementation, module=None, verify=True, docs_from_dispatcher=True): + """Like array_function_dispatcher, but with function arguments flipped.""" + + def decorator(dispatcher): + return array_function_dispatch( + dispatcher, module, verify=verify, + docs_from_dispatcher=docs_from_dispatcher)(implementation) + return decorator diff --git a/venv/lib/python3.12/site-packages/numpy/_core/records.py b/venv/lib/python3.12/site-packages/numpy/_core/records.py new file mode 100644 index 0000000000000000000000000000000000000000..8bdeec15c6d21c494db64a9c2f0583f6e9cf512c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/records.py @@ -0,0 +1,1089 @@ +""" +This module contains a set of functions for record arrays. +""" +import os +import warnings +from collections import Counter +from contextlib import nullcontext + +from .._utils import set_module +from . import numeric as sb +from . import numerictypes as nt +from .arrayprint import _get_legacy_print_mode + +# All of the functions allow formats to be a dtype +__all__ = [ + 'record', 'recarray', 'format_parser', 'fromarrays', 'fromrecords', + 'fromstring', 'fromfile', 'array', 'find_duplicate', +] + + +ndarray = sb.ndarray + +_byteorderconv = {'b': '>', + 'l': '<', + 'n': '=', + 'B': '>', + 'L': '<', + 'N': '=', + 'S': 's', + 's': 's', + '>': '>', + '<': '<', + '=': '=', + '|': '|', + 'I': '|', + 'i': '|'} + +# formats regular expression +# allows multidimensional spec with a tuple syntax in front +# of the letter code '(2,3)f4' and ' ( 2 , 3 ) f4 ' +# are equally allowed + +numfmt = nt.sctypeDict + + +@set_module('numpy.rec') +def find_duplicate(list): + """Find duplication in a list, return a list of duplicated elements""" + return [ + item + for item, counts in Counter(list).items() + if counts > 1 + ] + + +@set_module('numpy.rec') +class format_parser: + """ + Class to convert formats, names, titles description to a dtype. + + After constructing the format_parser object, the dtype attribute is + the converted data-type: + ``dtype = format_parser(formats, names, titles).dtype`` + + Attributes + ---------- + dtype : dtype + The converted data-type. + + Parameters + ---------- + formats : str or list of str + The format description, either specified as a string with + comma-separated format descriptions in the form ``'f8, i4, S5'``, or + a list of format description strings in the form + ``['f8', 'i4', 'S5']``. + names : str or list/tuple of str + The field names, either specified as a comma-separated string in the + form ``'col1, col2, col3'``, or as a list or tuple of strings in the + form ``['col1', 'col2', 'col3']``. + An empty list can be used, in that case default field names + ('f0', 'f1', ...) are used. + titles : sequence + Sequence of title strings. An empty list can be used to leave titles + out. + aligned : bool, optional + If True, align the fields by padding as the C-compiler would. + Default is False. + byteorder : str, optional + If specified, all the fields will be changed to the + provided byte-order. Otherwise, the default byte-order is + used. For all available string specifiers, see `dtype.newbyteorder`. + + See Also + -------- + numpy.dtype, numpy.typename + + Examples + -------- + >>> np.rec.format_parser(['>> np.rec.format_parser(['f8', 'i4', 'a5'], ['col1', 'col2', 'col3'], + ... []).dtype + dtype([('col1', '>> np.rec.format_parser([' len(titles): + self._titles += [None] * (self._nfields - len(titles)) + + def _createdtype(self, byteorder): + dtype = sb.dtype({ + 'names': self._names, + 'formats': self._f_formats, + 'offsets': self._offsets, + 'titles': self._titles, + }) + if byteorder is not None: + byteorder = _byteorderconv[byteorder[0]] + dtype = dtype.newbyteorder(byteorder) + + self.dtype = dtype + + +class record(nt.void): + """A data-type scalar that allows field access as attribute lookup. + """ + + # manually set name and module so that this class's type shows up + # as numpy.record when printed + __name__ = 'record' + __module__ = 'numpy' + + def __repr__(self): + if _get_legacy_print_mode() <= 113: + return self.__str__() + return super().__repr__() + + def __str__(self): + if _get_legacy_print_mode() <= 113: + return str(self.item()) + return super().__str__() + + def __getattribute__(self, attr): + if attr in ('setfield', 'getfield', 'dtype'): + return nt.void.__getattribute__(self, attr) + try: + return nt.void.__getattribute__(self, attr) + except AttributeError: + pass + fielddict = nt.void.__getattribute__(self, 'dtype').fields + res = fielddict.get(attr, None) + if res: + obj = self.getfield(*res[:2]) + # if it has fields return a record, + # otherwise return the object + try: + dt = obj.dtype + except AttributeError: + #happens if field is Object type + return obj + if dt.names is not None: + return obj.view((self.__class__, obj.dtype)) + return obj + else: + raise AttributeError("'record' object has no " + "attribute '%s'" % attr) + + def __setattr__(self, attr, val): + if attr in ('setfield', 'getfield', 'dtype'): + raise AttributeError("Cannot set '%s' attribute" % attr) + fielddict = nt.void.__getattribute__(self, 'dtype').fields + res = fielddict.get(attr, None) + if res: + return self.setfield(val, *res[:2]) + else: + if getattr(self, attr, None): + return nt.void.__setattr__(self, attr, val) + else: + raise AttributeError("'record' object has no " + "attribute '%s'" % attr) + + def __getitem__(self, indx): + obj = nt.void.__getitem__(self, indx) + + # copy behavior of record.__getattribute__, + if isinstance(obj, nt.void) and obj.dtype.names is not None: + return obj.view((self.__class__, obj.dtype)) + else: + # return a single element + return obj + + def pprint(self): + """Pretty-print all fields.""" + # pretty-print all fields + names = self.dtype.names + maxlen = max(len(name) for name in names) + fmt = '%% %ds: %%s' % maxlen + rows = [fmt % (name, getattr(self, name)) for name in names] + return "\n".join(rows) + +# The recarray is almost identical to a standard array (which supports +# named fields already) The biggest difference is that it can use +# attribute-lookup to find the fields and it is constructed using +# a record. + +# If byteorder is given it forces a particular byteorder on all +# the fields (and any subfields) + + +@set_module("numpy.rec") +class recarray(ndarray): + """Construct an ndarray that allows field access using attributes. + + Arrays may have a data-types containing fields, analogous + to columns in a spread sheet. An example is ``[(x, int), (y, float)]``, + where each entry in the array is a pair of ``(int, float)``. Normally, + these attributes are accessed using dictionary lookups such as ``arr['x']`` + and ``arr['y']``. Record arrays allow the fields to be accessed as members + of the array, using ``arr.x`` and ``arr.y``. + + Parameters + ---------- + shape : tuple + Shape of output array. + dtype : data-type, optional + The desired data-type. By default, the data-type is determined + from `formats`, `names`, `titles`, `aligned` and `byteorder`. + formats : list of data-types, optional + A list containing the data-types for the different columns, e.g. + ``['i4', 'f8', 'i4']``. `formats` does *not* support the new + convention of using types directly, i.e. ``(int, float, int)``. + Note that `formats` must be a list, not a tuple. + Given that `formats` is somewhat limited, we recommend specifying + `dtype` instead. + names : tuple of str, optional + The name of each column, e.g. ``('x', 'y', 'z')``. + buf : buffer, optional + By default, a new array is created of the given shape and data-type. + If `buf` is specified and is an object exposing the buffer interface, + the array will use the memory from the existing buffer. In this case, + the `offset` and `strides` keywords are available. + + Other Parameters + ---------------- + titles : tuple of str, optional + Aliases for column names. For example, if `names` were + ``('x', 'y', 'z')`` and `titles` is + ``('x_coordinate', 'y_coordinate', 'z_coordinate')``, then + ``arr['x']`` is equivalent to both ``arr.x`` and ``arr.x_coordinate``. + byteorder : {'<', '>', '='}, optional + Byte-order for all fields. + aligned : bool, optional + Align the fields in memory as the C-compiler would. + strides : tuple of ints, optional + Buffer (`buf`) is interpreted according to these strides (strides + define how many bytes each array element, row, column, etc. + occupy in memory). + offset : int, optional + Start reading buffer (`buf`) from this offset onwards. + order : {'C', 'F'}, optional + Row-major (C-style) or column-major (Fortran-style) order. + + Returns + ------- + rec : recarray + Empty array of the given shape and type. + + See Also + -------- + numpy.rec.fromrecords : Construct a record array from data. + numpy.record : fundamental data-type for `recarray`. + numpy.rec.format_parser : determine data-type from formats, names, titles. + + Notes + ----- + This constructor can be compared to ``empty``: it creates a new record + array but does not fill it with data. To create a record array from data, + use one of the following methods: + + 1. Create a standard ndarray and convert it to a record array, + using ``arr.view(np.recarray)`` + 2. Use the `buf` keyword. + 3. Use `np.rec.fromrecords`. + + Examples + -------- + Create an array with two fields, ``x`` and ``y``: + + >>> x = np.array([(1.0, 2), (3.0, 4)], dtype=[('x', '>> x + array([(1., 2), (3., 4)], dtype=[('x', '>> x['x'] + array([1., 3.]) + + View the array as a record array: + + >>> x = x.view(np.recarray) + + >>> x.x + array([1., 3.]) + + >>> x.y + array([2, 4]) + + Create a new, empty record array: + + >>> np.recarray((2,), + ... dtype=[('x', int), ('y', float), ('z', int)]) #doctest: +SKIP + rec.array([(-1073741821, 1.2249118382103472e-301, 24547520), + (3471280, 1.2134086255804012e-316, 0)], + dtype=[('x', ' 0 or self.shape == (0,): + lst = sb.array2string( + self, separator=', ', prefix=prefix, suffix=',') + else: + # show zero-length shape unless it is (0,) + lst = "[], shape=%s" % (repr(self.shape),) + + lf = '\n'+' '*len(prefix) + if _get_legacy_print_mode() <= 113: + lf = ' ' + lf # trailing space + return fmt % (lst, lf, repr_dtype) + + def field(self, attr, val=None): + if isinstance(attr, int): + names = ndarray.__getattribute__(self, 'dtype').names + attr = names[attr] + + fielddict = ndarray.__getattribute__(self, 'dtype').fields + + res = fielddict[attr][:2] + + if val is None: + obj = self.getfield(*res) + if obj.dtype.names is not None: + return obj + return obj.view(ndarray) + else: + return self.setfield(val, *res) + + +def _deprecate_shape_0_as_None(shape): + if shape == 0: + warnings.warn( + "Passing `shape=0` to have the shape be inferred is deprecated, " + "and in future will be equivalent to `shape=(0,)`. To infer " + "the shape and suppress this warning, pass `shape=None` instead.", + FutureWarning, stacklevel=3) + return None + else: + return shape + + +@set_module("numpy.rec") +def fromarrays(arrayList, dtype=None, shape=None, formats=None, + names=None, titles=None, aligned=False, byteorder=None): + """Create a record array from a (flat) list of arrays + + Parameters + ---------- + arrayList : list or tuple + List of array-like objects (such as lists, tuples, + and ndarrays). + dtype : data-type, optional + valid dtype for all arrays + shape : int or tuple of ints, optional + Shape of the resulting array. If not provided, inferred from + ``arrayList[0]``. + formats, names, titles, aligned, byteorder : + If `dtype` is ``None``, these arguments are passed to + `numpy.rec.format_parser` to construct a dtype. See that function for + detailed documentation. + + Returns + ------- + np.recarray + Record array consisting of given arrayList columns. + + Examples + -------- + >>> x1=np.array([1,2,3,4]) + >>> x2=np.array(['a','dd','xyz','12']) + >>> x3=np.array([1.1,2,3,4]) + >>> r = np.rec.fromarrays([x1,x2,x3],names='a,b,c') + >>> print(r[1]) + (2, 'dd', 2.0) # may vary + >>> x1[1]=34 + >>> r.a + array([1, 2, 3, 4]) + + >>> x1 = np.array([1, 2, 3, 4]) + >>> x2 = np.array(['a', 'dd', 'xyz', '12']) + >>> x3 = np.array([1.1, 2, 3,4]) + >>> r = np.rec.fromarrays( + ... [x1, x2, x3], + ... dtype=np.dtype([('a', np.int32), ('b', 'S3'), ('c', np.float32)])) + >>> r + rec.array([(1, b'a', 1.1), (2, b'dd', 2. ), (3, b'xyz', 3. ), + (4, b'12', 4. )], + dtype=[('a', ' 0: + shape = shape[:-nn] + + _array = recarray(shape, descr) + + # populate the record array (makes a copy) + for k, obj in enumerate(arrayList): + nn = descr[k].ndim + testshape = obj.shape[:obj.ndim - nn] + name = _names[k] + if testshape != shape: + raise ValueError(f'array-shape mismatch in array {k} ("{name}")') + + _array[name] = obj + + return _array + + +@set_module("numpy.rec") +def fromrecords(recList, dtype=None, shape=None, formats=None, names=None, + titles=None, aligned=False, byteorder=None): + """Create a recarray from a list of records in text form. + + Parameters + ---------- + recList : sequence + data in the same field may be heterogeneous - they will be promoted + to the highest data type. + dtype : data-type, optional + valid dtype for all arrays + shape : int or tuple of ints, optional + shape of each array. + formats, names, titles, aligned, byteorder : + If `dtype` is ``None``, these arguments are passed to + `numpy.format_parser` to construct a dtype. See that function for + detailed documentation. + + If both `formats` and `dtype` are None, then this will auto-detect + formats. Use list of tuples rather than list of lists for faster + processing. + + Returns + ------- + np.recarray + record array consisting of given recList rows. + + Examples + -------- + >>> r=np.rec.fromrecords([(456,'dbe',1.2),(2,'de',1.3)], + ... names='col1,col2,col3') + >>> print(r[0]) + (456, 'dbe', 1.2) + >>> r.col1 + array([456, 2]) + >>> r.col2 + array(['dbe', 'de'], dtype='>> import pickle + >>> pickle.loads(pickle.dumps(r)) + rec.array([(456, 'dbe', 1.2), ( 2, 'de', 1.3)], + dtype=[('col1', ' 1: + raise ValueError("Can only deal with 1-d array.") + _array = recarray(shape, descr) + for k in range(_array.size): + _array[k] = tuple(recList[k]) + # list of lists instead of list of tuples ? + # 2018-02-07, 1.14.1 + warnings.warn( + "fromrecords expected a list of tuples, may have received a list " + "of lists instead. In the future that will raise an error", + FutureWarning, stacklevel=2) + return _array + else: + if shape is not None and retval.shape != shape: + retval.shape = shape + + res = retval.view(recarray) + + return res + + +@set_module("numpy.rec") +def fromstring(datastring, dtype=None, shape=None, offset=0, formats=None, + names=None, titles=None, aligned=False, byteorder=None): + r"""Create a record array from binary data + + Note that despite the name of this function it does not accept `str` + instances. + + Parameters + ---------- + datastring : bytes-like + Buffer of binary data + dtype : data-type, optional + Valid dtype for all arrays + shape : int or tuple of ints, optional + Shape of each array. + offset : int, optional + Position in the buffer to start reading from. + formats, names, titles, aligned, byteorder : + If `dtype` is ``None``, these arguments are passed to + `numpy.format_parser` to construct a dtype. See that function for + detailed documentation. + + + Returns + ------- + np.recarray + Record array view into the data in datastring. This will be readonly + if `datastring` is readonly. + + See Also + -------- + numpy.frombuffer + + Examples + -------- + >>> a = b'\x01\x02\x03abc' + >>> np.rec.fromstring(a, dtype='u1,u1,u1,S3') + rec.array([(1, 2, 3, b'abc')], + dtype=[('f0', 'u1'), ('f1', 'u1'), ('f2', 'u1'), ('f3', 'S3')]) + + >>> grades_dtype = [('Name', (np.str_, 10)), ('Marks', np.float64), + ... ('GradeLevel', np.int32)] + >>> grades_array = np.array([('Sam', 33.3, 3), ('Mike', 44.4, 5), + ... ('Aadi', 66.6, 6)], dtype=grades_dtype) + >>> np.rec.fromstring(grades_array.tobytes(), dtype=grades_dtype) + rec.array([('Sam', 33.3, 3), ('Mike', 44.4, 5), ('Aadi', 66.6, 6)], + dtype=[('Name', '>> s = '\x01\x02\x03abc' + >>> np.rec.fromstring(s, dtype='u1,u1,u1,S3') + Traceback (most recent call last): + ... + TypeError: a bytes-like object is required, not 'str' + """ + + if dtype is None and formats is None: + raise TypeError("fromstring() needs a 'dtype' or 'formats' argument") + + if dtype is not None: + descr = sb.dtype(dtype) + else: + descr = format_parser(formats, names, titles, aligned, byteorder).dtype + + itemsize = descr.itemsize + + # NumPy 1.19.0, 2020-01-01 + shape = _deprecate_shape_0_as_None(shape) + + if shape in (None, -1): + shape = (len(datastring) - offset) // itemsize + + _array = recarray(shape, descr, buf=datastring, offset=offset) + return _array + +def get_remaining_size(fd): + pos = fd.tell() + try: + fd.seek(0, 2) + return fd.tell() - pos + finally: + fd.seek(pos, 0) + + +@set_module("numpy.rec") +def fromfile(fd, dtype=None, shape=None, offset=0, formats=None, + names=None, titles=None, aligned=False, byteorder=None): + """Create an array from binary file data + + Parameters + ---------- + fd : str or file type + If file is a string or a path-like object then that file is opened, + else it is assumed to be a file object. The file object must + support random access (i.e. it must have tell and seek methods). + dtype : data-type, optional + valid dtype for all arrays + shape : int or tuple of ints, optional + shape of each array. + offset : int, optional + Position in the file to start reading from. + formats, names, titles, aligned, byteorder : + If `dtype` is ``None``, these arguments are passed to + `numpy.format_parser` to construct a dtype. See that function for + detailed documentation + + Returns + ------- + np.recarray + record array consisting of data enclosed in file. + + Examples + -------- + >>> from tempfile import TemporaryFile + >>> a = np.empty(10,dtype='f8,i4,a5') + >>> a[5] = (0.5,10,'abcde') + >>> + >>> fd=TemporaryFile() + >>> a = a.view(a.dtype.newbyteorder('<')) + >>> a.tofile(fd) + >>> + >>> _ = fd.seek(0) + >>> r=np.rec.fromfile(fd, formats='f8,i4,a5', shape=10, + ... byteorder='<') + >>> print(r[5]) + (0.5, 10, b'abcde') + >>> r.shape + (10,) + """ + + if dtype is None and formats is None: + raise TypeError("fromfile() needs a 'dtype' or 'formats' argument") + + # NumPy 1.19.0, 2020-01-01 + shape = _deprecate_shape_0_as_None(shape) + + if shape is None: + shape = (-1,) + elif isinstance(shape, int): + shape = (shape,) + + if hasattr(fd, 'readinto'): + # GH issue 2504. fd supports io.RawIOBase or io.BufferedIOBase + # interface. Example of fd: gzip, BytesIO, BufferedReader + # file already opened + ctx = nullcontext(fd) + else: + # open file + ctx = open(os.fspath(fd), 'rb') + + with ctx as fd: + if offset > 0: + fd.seek(offset, 1) + size = get_remaining_size(fd) + + if dtype is not None: + descr = sb.dtype(dtype) + else: + descr = format_parser( + formats, names, titles, aligned, byteorder + ).dtype + + itemsize = descr.itemsize + + shapeprod = sb.array(shape).prod(dtype=nt.intp) + shapesize = shapeprod * itemsize + if shapesize < 0: + shape = list(shape) + shape[shape.index(-1)] = size // -shapesize + shape = tuple(shape) + shapeprod = sb.array(shape).prod(dtype=nt.intp) + + nbytes = shapeprod * itemsize + + if nbytes > size: + raise ValueError( + "Not enough bytes left in file for specified " + "shape and type." + ) + + # create the array + _array = recarray(shape, descr) + nbytesread = fd.readinto(_array.data) + if nbytesread != nbytes: + raise OSError("Didn't read as many bytes as expected") + + return _array + + +@set_module("numpy.rec") +def array(obj, dtype=None, shape=None, offset=0, strides=None, formats=None, + names=None, titles=None, aligned=False, byteorder=None, copy=True): + """ + Construct a record array from a wide-variety of objects. + + A general-purpose record array constructor that dispatches to the + appropriate `recarray` creation function based on the inputs (see Notes). + + Parameters + ---------- + obj : any + Input object. See Notes for details on how various input types are + treated. + dtype : data-type, optional + Valid dtype for array. + shape : int or tuple of ints, optional + Shape of each array. + offset : int, optional + Position in the file or buffer to start reading from. + strides : tuple of ints, optional + Buffer (`buf`) is interpreted according to these strides (strides + define how many bytes each array element, row, column, etc. + occupy in memory). + formats, names, titles, aligned, byteorder : + If `dtype` is ``None``, these arguments are passed to + `numpy.format_parser` to construct a dtype. See that function for + detailed documentation. + copy : bool, optional + Whether to copy the input object (True), or to use a reference instead. + This option only applies when the input is an ndarray or recarray. + Defaults to True. + + Returns + ------- + np.recarray + Record array created from the specified object. + + Notes + ----- + If `obj` is ``None``, then call the `~numpy.recarray` constructor. If + `obj` is a string, then call the `fromstring` constructor. If `obj` is a + list or a tuple, then if the first object is an `~numpy.ndarray`, call + `fromarrays`, otherwise call `fromrecords`. If `obj` is a + `~numpy.recarray`, then make a copy of the data in the recarray + (if ``copy=True``) and use the new formats, names, and titles. If `obj` + is a file, then call `fromfile`. Finally, if obj is an `ndarray`, then + return ``obj.view(recarray)``, making a copy of the data if ``copy=True``. + + Examples + -------- + >>> a = np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9]]) + >>> a + array([[1, 2, 3], + [4, 5, 6], + [7, 8, 9]]) + + >>> np.rec.array(a) + rec.array([[1, 2, 3], + [4, 5, 6], + [7, 8, 9]], + dtype=int64) + + >>> b = [(1, 1), (2, 4), (3, 9)] + >>> c = np.rec.array(b, formats = ['i2', 'f2'], names = ('x', 'y')) + >>> c + rec.array([(1, 1.), (2, 4.), (3, 9.)], + dtype=[('x', '>> c.x + array([1, 2, 3], dtype=int16) + + >>> c.y + array([1., 4., 9.], dtype=float16) + + >>> r = np.rec.array(['abc','def'], names=['col1','col2']) + >>> print(r.col1) + abc + + >>> r.col1 + array('abc', dtype='>> r.col2 + array('def', dtype=' object: ... + def tell(self, /) -> int: ... + def readinto(self, buffer: memoryview, /) -> int: ... + +class record(void): + def __getattribute__(self, attr: str) -> Any: ... + def __setattr__(self, attr: str, val: ArrayLike) -> None: ... + def pprint(self) -> str: ... + @overload + def __getitem__(self, key: str | SupportsIndex) -> Any: ... + @overload + def __getitem__(self, key: list[str]) -> record: ... + +class recarray(ndarray[_ShapeType, _DType_co]): + # NOTE: While not strictly mandatory, we're demanding here that arguments + # for the `format_parser`- and `dtype`-based dtype constructors are + # mutually exclusive + @overload + def __new__( + subtype, + shape: _ShapeLike, + dtype: None = ..., + buf: None | _SupportsBuffer = ..., + offset: SupportsIndex = ..., + strides: None | _ShapeLike = ..., + *, + formats: DTypeLike, + names: None | str | Sequence[str] = ..., + titles: None | str | Sequence[str] = ..., + byteorder: None | _ByteOrder = ..., + aligned: bool = ..., + order: _OrderKACF = ..., + ) -> recarray[Any, dtype[record]]: ... + @overload + def __new__( + subtype, + shape: _ShapeLike, + dtype: DTypeLike, + buf: None | _SupportsBuffer = ..., + offset: SupportsIndex = ..., + strides: None | _ShapeLike = ..., + formats: None = ..., + names: None = ..., + titles: None = ..., + byteorder: None = ..., + aligned: Literal[False] = ..., + order: _OrderKACF = ..., + ) -> recarray[Any, dtype[Any]]: ... + def __array_finalize__(self, obj: object) -> None: ... + def __getattribute__(self, attr: str) -> Any: ... + def __setattr__(self, attr: str, val: ArrayLike) -> None: ... + @overload + def __getitem__(self, indx: ( + SupportsIndex + | _ArrayLikeInt_co + | tuple[SupportsIndex | _ArrayLikeInt_co, ...] + )) -> Any: ... + @overload + def __getitem__(self: recarray[Any, dtype[void]], indx: ( + None + | slice + | ellipsis + | SupportsIndex + | _ArrayLikeInt_co + | tuple[None | slice | ellipsis | _ArrayLikeInt_co | SupportsIndex, ...] + )) -> recarray[Any, _DType_co]: ... + @overload + def __getitem__(self, indx: ( + None + | slice + | ellipsis + | SupportsIndex + | _ArrayLikeInt_co + | tuple[None | slice | ellipsis | _ArrayLikeInt_co | SupportsIndex, ...] + )) -> ndarray[Any, _DType_co]: ... + @overload + def __getitem__(self, indx: str) -> NDArray[Any]: ... + @overload + def __getitem__(self, indx: list[str]) -> recarray[_ShapeType, dtype[record]]: ... + @overload + def field(self, attr: int | str, val: None = ...) -> Any: ... + @overload + def field(self, attr: int | str, val: ArrayLike) -> None: ... + +class format_parser: + dtype: dtype[void] + def __init__( + self, + formats: DTypeLike, + names: None | str | Sequence[str], + titles: None | str | Sequence[str], + aligned: bool = ..., + byteorder: None | _ByteOrder = ..., + ) -> None: ... + +__all__: list[str] + +@overload +def fromarrays( + arrayList: Iterable[ArrayLike], + dtype: DTypeLike = ..., + shape: None | _ShapeLike = ..., + formats: None = ..., + names: None = ..., + titles: None = ..., + aligned: bool = ..., + byteorder: None = ..., +) -> _RecArray[Any]: ... +@overload +def fromarrays( + arrayList: Iterable[ArrayLike], + dtype: None = ..., + shape: None | _ShapeLike = ..., + *, + formats: DTypeLike, + names: None | str | Sequence[str] = ..., + titles: None | str | Sequence[str] = ..., + aligned: bool = ..., + byteorder: None | _ByteOrder = ..., +) -> _RecArray[record]: ... + +@overload +def fromrecords( + recList: _ArrayLikeVoid_co | tuple[Any, ...] | _NestedSequence[tuple[Any, ...]], + dtype: DTypeLike = ..., + shape: None | _ShapeLike = ..., + formats: None = ..., + names: None = ..., + titles: None = ..., + aligned: bool = ..., + byteorder: None = ..., +) -> _RecArray[record]: ... +@overload +def fromrecords( + recList: _ArrayLikeVoid_co | tuple[Any, ...] | _NestedSequence[tuple[Any, ...]], + dtype: None = ..., + shape: None | _ShapeLike = ..., + *, + formats: DTypeLike = ..., + names: None | str | Sequence[str] = ..., + titles: None | str | Sequence[str] = ..., + aligned: bool = ..., + byteorder: None | _ByteOrder = ..., +) -> _RecArray[record]: ... + +@overload +def fromstring( + datastring: _SupportsBuffer, + dtype: DTypeLike, + shape: None | _ShapeLike = ..., + offset: int = ..., + formats: None = ..., + names: None = ..., + titles: None = ..., + aligned: bool = ..., + byteorder: None = ..., +) -> _RecArray[record]: ... +@overload +def fromstring( + datastring: _SupportsBuffer, + dtype: None = ..., + shape: None | _ShapeLike = ..., + offset: int = ..., + *, + formats: DTypeLike, + names: None | str | Sequence[str] = ..., + titles: None | str | Sequence[str] = ..., + aligned: bool = ..., + byteorder: None | _ByteOrder = ..., +) -> _RecArray[record]: ... + +@overload +def fromfile( + fd: str | bytes | os.PathLike[str] | os.PathLike[bytes] | _SupportsReadInto, + dtype: DTypeLike, + shape: None | _ShapeLike = ..., + offset: int = ..., + formats: None = ..., + names: None = ..., + titles: None = ..., + aligned: bool = ..., + byteorder: None = ..., +) -> _RecArray[Any]: ... +@overload +def fromfile( + fd: str | bytes | os.PathLike[str] | os.PathLike[bytes] | _SupportsReadInto, + dtype: None = ..., + shape: None | _ShapeLike = ..., + offset: int = ..., + *, + formats: DTypeLike, + names: None | str | Sequence[str] = ..., + titles: None | str | Sequence[str] = ..., + aligned: bool = ..., + byteorder: None | _ByteOrder = ..., +) -> _RecArray[record]: ... + +@overload +def array( + obj: _SCT | NDArray[_SCT], + dtype: None = ..., + shape: None | _ShapeLike = ..., + offset: int = ..., + formats: None = ..., + names: None = ..., + titles: None = ..., + aligned: bool = ..., + byteorder: None = ..., + copy: bool = ..., +) -> _RecArray[_SCT]: ... +@overload +def array( + obj: ArrayLike, + dtype: DTypeLike, + shape: None | _ShapeLike = ..., + offset: int = ..., + formats: None = ..., + names: None = ..., + titles: None = ..., + aligned: bool = ..., + byteorder: None = ..., + copy: bool = ..., +) -> _RecArray[Any]: ... +@overload +def array( + obj: ArrayLike, + dtype: None = ..., + shape: None | _ShapeLike = ..., + offset: int = ..., + *, + formats: DTypeLike, + names: None | str | Sequence[str] = ..., + titles: None | str | Sequence[str] = ..., + aligned: bool = ..., + byteorder: None | _ByteOrder = ..., + copy: bool = ..., +) -> _RecArray[record]: ... +@overload +def array( + obj: None, + dtype: DTypeLike, + shape: _ShapeLike, + offset: int = ..., + formats: None = ..., + names: None = ..., + titles: None = ..., + aligned: bool = ..., + byteorder: None = ..., + copy: bool = ..., +) -> _RecArray[Any]: ... +@overload +def array( + obj: None, + dtype: None = ..., + *, + shape: _ShapeLike, + offset: int = ..., + formats: DTypeLike, + names: None | str | Sequence[str] = ..., + titles: None | str | Sequence[str] = ..., + aligned: bool = ..., + byteorder: None | _ByteOrder = ..., + copy: bool = ..., +) -> _RecArray[record]: ... +@overload +def array( + obj: _SupportsReadInto, + dtype: DTypeLike, + shape: None | _ShapeLike = ..., + offset: int = ..., + formats: None = ..., + names: None = ..., + titles: None = ..., + aligned: bool = ..., + byteorder: None = ..., + copy: bool = ..., +) -> _RecArray[Any]: ... +@overload +def array( + obj: _SupportsReadInto, + dtype: None = ..., + shape: None | _ShapeLike = ..., + offset: int = ..., + *, + formats: DTypeLike, + names: None | str | Sequence[str] = ..., + titles: None | str | Sequence[str] = ..., + aligned: bool = ..., + byteorder: None | _ByteOrder = ..., + copy: bool = ..., +) -> _RecArray[record]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/_core/shape_base.py b/venv/lib/python3.12/site-packages/numpy/_core/shape_base.py new file mode 100644 index 0000000000000000000000000000000000000000..200d8e7c74d75baaf18c657ee7ed7d868635ff6c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/shape_base.py @@ -0,0 +1,923 @@ +__all__ = ['atleast_1d', 'atleast_2d', 'atleast_3d', 'block', 'hstack', + 'stack', 'vstack'] + +import functools +import itertools +import operator +import warnings + +from . import numeric as _nx +from . import overrides +from .multiarray import array, asanyarray, normalize_axis_index +from . import fromnumeric as _from_nx + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +def _atleast_1d_dispatcher(*arys): + return arys + + +@array_function_dispatch(_atleast_1d_dispatcher) +def atleast_1d(*arys): + """ + Convert inputs to arrays with at least one dimension. + + Scalar inputs are converted to 1-dimensional arrays, whilst + higher-dimensional inputs are preserved. + + Parameters + ---------- + arys1, arys2, ... : array_like + One or more input arrays. + + Returns + ------- + ret : ndarray + An array, or tuple of arrays, each with ``a.ndim >= 1``. + Copies are made only if necessary. + + See Also + -------- + atleast_2d, atleast_3d + + Examples + -------- + >>> np.atleast_1d(1.0) + array([1.]) + + >>> x = np.arange(9.0).reshape(3,3) + >>> np.atleast_1d(x) + array([[0., 1., 2.], + [3., 4., 5.], + [6., 7., 8.]]) + >>> np.atleast_1d(x) is x + True + + >>> np.atleast_1d(1, [3, 4]) + (array([1]), array([3, 4])) + + """ + res = [] + for ary in arys: + ary = asanyarray(ary) + if ary.ndim == 0: + result = ary.reshape(1) + else: + result = ary + res.append(result) + if len(res) == 1: + return res[0] + else: + return tuple(res) + + +def _atleast_2d_dispatcher(*arys): + return arys + + +@array_function_dispatch(_atleast_2d_dispatcher) +def atleast_2d(*arys): + """ + View inputs as arrays with at least two dimensions. + + Parameters + ---------- + arys1, arys2, ... : array_like + One or more array-like sequences. Non-array inputs are converted + to arrays. Arrays that already have two or more dimensions are + preserved. + + Returns + ------- + res, res2, ... : ndarray + An array, or tuple of arrays, each with ``a.ndim >= 2``. + Copies are avoided where possible, and views with two or more + dimensions are returned. + + See Also + -------- + atleast_1d, atleast_3d + + Examples + -------- + >>> np.atleast_2d(3.0) + array([[3.]]) + + >>> x = np.arange(3.0) + >>> np.atleast_2d(x) + array([[0., 1., 2.]]) + >>> np.atleast_2d(x).base is x + True + + >>> np.atleast_2d(1, [1, 2], [[1, 2]]) + (array([[1]]), array([[1, 2]]), array([[1, 2]])) + + """ + res = [] + for ary in arys: + ary = asanyarray(ary) + if ary.ndim == 0: + result = ary.reshape(1, 1) + elif ary.ndim == 1: + result = ary[_nx.newaxis, :] + else: + result = ary + res.append(result) + if len(res) == 1: + return res[0] + else: + return tuple(res) + + +def _atleast_3d_dispatcher(*arys): + return arys + + +@array_function_dispatch(_atleast_3d_dispatcher) +def atleast_3d(*arys): + """ + View inputs as arrays with at least three dimensions. + + Parameters + ---------- + arys1, arys2, ... : array_like + One or more array-like sequences. Non-array inputs are converted to + arrays. Arrays that already have three or more dimensions are + preserved. + + Returns + ------- + res1, res2, ... : ndarray + An array, or tuple of arrays, each with ``a.ndim >= 3``. Copies are + avoided where possible, and views with three or more dimensions are + returned. For example, a 1-D array of shape ``(N,)`` becomes a view + of shape ``(1, N, 1)``, and a 2-D array of shape ``(M, N)`` becomes a + view of shape ``(M, N, 1)``. + + See Also + -------- + atleast_1d, atleast_2d + + Examples + -------- + >>> np.atleast_3d(3.0) + array([[[3.]]]) + + >>> x = np.arange(3.0) + >>> np.atleast_3d(x).shape + (1, 3, 1) + + >>> x = np.arange(12.0).reshape(4,3) + >>> np.atleast_3d(x).shape + (4, 3, 1) + >>> np.atleast_3d(x).base is x.base # x is a reshape, so not base itself + True + + >>> for arr in np.atleast_3d([1, 2], [[1, 2]], [[[1, 2]]]): + ... print(arr, arr.shape) # doctest: +SKIP + ... + [[[1] + [2]]] (1, 2, 1) + [[[1] + [2]]] (1, 2, 1) + [[[1 2]]] (1, 1, 2) + + """ + res = [] + for ary in arys: + ary = asanyarray(ary) + if ary.ndim == 0: + result = ary.reshape(1, 1, 1) + elif ary.ndim == 1: + result = ary[_nx.newaxis, :, _nx.newaxis] + elif ary.ndim == 2: + result = ary[:, :, _nx.newaxis] + else: + result = ary + res.append(result) + if len(res) == 1: + return res[0] + else: + return tuple(res) + + +def _arrays_for_stack_dispatcher(arrays): + if not hasattr(arrays, "__getitem__"): + raise TypeError('arrays to stack must be passed as a "sequence" type ' + 'such as list or tuple.') + + return tuple(arrays) + + +def _vhstack_dispatcher(tup, *, dtype=None, casting=None): + return _arrays_for_stack_dispatcher(tup) + + +@array_function_dispatch(_vhstack_dispatcher) +def vstack(tup, *, dtype=None, casting="same_kind"): + """ + Stack arrays in sequence vertically (row wise). + + This is equivalent to concatenation along the first axis after 1-D arrays + of shape `(N,)` have been reshaped to `(1,N)`. Rebuilds arrays divided by + `vsplit`. + + This function makes most sense for arrays with up to 3 dimensions. For + instance, for pixel-data with a height (first axis), width (second axis), + and r/g/b channels (third axis). The functions `concatenate`, `stack` and + `block` provide more general stacking and concatenation operations. + + Parameters + ---------- + tup : sequence of ndarrays + The arrays must have the same shape along all but the first axis. + 1-D arrays must have the same length. + + dtype : str or dtype + If provided, the destination array will have this dtype. Cannot be + provided together with `out`. + + .. versionadded:: 1.24 + + casting : {'no', 'equiv', 'safe', 'same_kind', 'unsafe'}, optional + Controls what kind of data casting may occur. Defaults to 'same_kind'. + + .. versionadded:: 1.24 + + Returns + ------- + stacked : ndarray + The array formed by stacking the given arrays, will be at least 2-D. + + See Also + -------- + concatenate : Join a sequence of arrays along an existing axis. + stack : Join a sequence of arrays along a new axis. + block : Assemble an nd-array from nested lists of blocks. + hstack : Stack arrays in sequence horizontally (column wise). + dstack : Stack arrays in sequence depth wise (along third axis). + column_stack : Stack 1-D arrays as columns into a 2-D array. + vsplit : Split an array into multiple sub-arrays vertically (row-wise). + + Examples + -------- + >>> a = np.array([1, 2, 3]) + >>> b = np.array([4, 5, 6]) + >>> np.vstack((a,b)) + array([[1, 2, 3], + [4, 5, 6]]) + + >>> a = np.array([[1], [2], [3]]) + >>> b = np.array([[4], [5], [6]]) + >>> np.vstack((a,b)) + array([[1], + [2], + [3], + [4], + [5], + [6]]) + + """ + arrs = atleast_2d(*tup) + if not isinstance(arrs, tuple): + arrs = (arrs,) + return _nx.concatenate(arrs, 0, dtype=dtype, casting=casting) + + +@array_function_dispatch(_vhstack_dispatcher) +def hstack(tup, *, dtype=None, casting="same_kind"): + """ + Stack arrays in sequence horizontally (column wise). + + This is equivalent to concatenation along the second axis, except for 1-D + arrays where it concatenates along the first axis. Rebuilds arrays divided + by `hsplit`. + + This function makes most sense for arrays with up to 3 dimensions. For + instance, for pixel-data with a height (first axis), width (second axis), + and r/g/b channels (third axis). The functions `concatenate`, `stack` and + `block` provide more general stacking and concatenation operations. + + Parameters + ---------- + tup : sequence of ndarrays + The arrays must have the same shape along all but the second axis, + except 1-D arrays which can be any length. + + dtype : str or dtype + If provided, the destination array will have this dtype. Cannot be + provided together with `out`. + + .. versionadded:: 1.24 + + casting : {'no', 'equiv', 'safe', 'same_kind', 'unsafe'}, optional + Controls what kind of data casting may occur. Defaults to 'same_kind'. + + .. versionadded:: 1.24 + + Returns + ------- + stacked : ndarray + The array formed by stacking the given arrays. + + See Also + -------- + concatenate : Join a sequence of arrays along an existing axis. + stack : Join a sequence of arrays along a new axis. + block : Assemble an nd-array from nested lists of blocks. + vstack : Stack arrays in sequence vertically (row wise). + dstack : Stack arrays in sequence depth wise (along third axis). + column_stack : Stack 1-D arrays as columns into a 2-D array. + hsplit : Split an array into multiple sub-arrays + horizontally (column-wise). + + Examples + -------- + >>> a = np.array((1,2,3)) + >>> b = np.array((4,5,6)) + >>> np.hstack((a,b)) + array([1, 2, 3, 4, 5, 6]) + >>> a = np.array([[1],[2],[3]]) + >>> b = np.array([[4],[5],[6]]) + >>> np.hstack((a,b)) + array([[1, 4], + [2, 5], + [3, 6]]) + + """ + arrs = atleast_1d(*tup) + if not isinstance(arrs, tuple): + arrs = (arrs,) + # As a special case, dimension 0 of 1-dimensional arrays is "horizontal" + if arrs and arrs[0].ndim == 1: + return _nx.concatenate(arrs, 0, dtype=dtype, casting=casting) + else: + return _nx.concatenate(arrs, 1, dtype=dtype, casting=casting) + + +def _stack_dispatcher(arrays, axis=None, out=None, *, + dtype=None, casting=None): + arrays = _arrays_for_stack_dispatcher(arrays) + if out is not None: + # optimize for the typical case where only arrays is provided + arrays = list(arrays) + arrays.append(out) + return arrays + + +@array_function_dispatch(_stack_dispatcher) +def stack(arrays, axis=0, out=None, *, dtype=None, casting="same_kind"): + """ + Join a sequence of arrays along a new axis. + + The ``axis`` parameter specifies the index of the new axis in the + dimensions of the result. For example, if ``axis=0`` it will be the first + dimension and if ``axis=-1`` it will be the last dimension. + + .. versionadded:: 1.10.0 + + Parameters + ---------- + arrays : sequence of array_like + Each array must have the same shape. + + axis : int, optional + The axis in the result array along which the input arrays are stacked. + + out : ndarray, optional + If provided, the destination to place the result. The shape must be + correct, matching that of what stack would have returned if no + out argument were specified. + + dtype : str or dtype + If provided, the destination array will have this dtype. Cannot be + provided together with `out`. + + .. versionadded:: 1.24 + + casting : {'no', 'equiv', 'safe', 'same_kind', 'unsafe'}, optional + Controls what kind of data casting may occur. Defaults to 'same_kind'. + + .. versionadded:: 1.24 + + + Returns + ------- + stacked : ndarray + The stacked array has one more dimension than the input arrays. + + See Also + -------- + concatenate : Join a sequence of arrays along an existing axis. + block : Assemble an nd-array from nested lists of blocks. + split : Split array into a list of multiple sub-arrays of equal size. + + Examples + -------- + >>> arrays = [np.random.randn(3, 4) for _ in range(10)] + >>> np.stack(arrays, axis=0).shape + (10, 3, 4) + + >>> np.stack(arrays, axis=1).shape + (3, 10, 4) + + >>> np.stack(arrays, axis=2).shape + (3, 4, 10) + + >>> a = np.array([1, 2, 3]) + >>> b = np.array([4, 5, 6]) + >>> np.stack((a, b)) + array([[1, 2, 3], + [4, 5, 6]]) + + >>> np.stack((a, b), axis=-1) + array([[1, 4], + [2, 5], + [3, 6]]) + + """ + arrays = [asanyarray(arr) for arr in arrays] + if not arrays: + raise ValueError('need at least one array to stack') + + shapes = {arr.shape for arr in arrays} + if len(shapes) != 1: + raise ValueError('all input arrays must have the same shape') + + result_ndim = arrays[0].ndim + 1 + axis = normalize_axis_index(axis, result_ndim) + + sl = (slice(None),) * axis + (_nx.newaxis,) + expanded_arrays = [arr[sl] for arr in arrays] + return _nx.concatenate(expanded_arrays, axis=axis, out=out, + dtype=dtype, casting=casting) + + +# Internal functions to eliminate the overhead of repeated dispatch in one of +# the two possible paths inside np.block. +# Use getattr to protect against __array_function__ being disabled. +_size = getattr(_from_nx.size, '__wrapped__', _from_nx.size) +_ndim = getattr(_from_nx.ndim, '__wrapped__', _from_nx.ndim) +_concatenate = getattr(_from_nx.concatenate, + '__wrapped__', _from_nx.concatenate) + + +def _block_format_index(index): + """ + Convert a list of indices ``[0, 1, 2]`` into ``"arrays[0][1][2]"``. + """ + idx_str = ''.join('[{}]'.format(i) for i in index if i is not None) + return 'arrays' + idx_str + + +def _block_check_depths_match(arrays, parent_index=[]): + """ + Recursive function checking that the depths of nested lists in `arrays` + all match. Mismatch raises a ValueError as described in the block + docstring below. + + The entire index (rather than just the depth) needs to be calculated + for each innermost list, in case an error needs to be raised, so that + the index of the offending list can be printed as part of the error. + + Parameters + ---------- + arrays : nested list of arrays + The arrays to check + parent_index : list of int + The full index of `arrays` within the nested lists passed to + `_block_check_depths_match` at the top of the recursion. + + Returns + ------- + first_index : list of int + The full index of an element from the bottom of the nesting in + `arrays`. If any element at the bottom is an empty list, this will + refer to it, and the last index along the empty axis will be None. + max_arr_ndim : int + The maximum of the ndims of the arrays nested in `arrays`. + final_size: int + The number of elements in the final array. This is used the motivate + the choice of algorithm used using benchmarking wisdom. + + """ + if type(arrays) is tuple: + # not strictly necessary, but saves us from: + # - more than one way to do things - no point treating tuples like + # lists + # - horribly confusing behaviour that results when tuples are + # treated like ndarray + raise TypeError( + '{} is a tuple. ' + 'Only lists can be used to arrange blocks, and np.block does ' + 'not allow implicit conversion from tuple to ndarray.'.format( + _block_format_index(parent_index) + ) + ) + elif type(arrays) is list and len(arrays) > 0: + idxs_ndims = (_block_check_depths_match(arr, parent_index + [i]) + for i, arr in enumerate(arrays)) + + first_index, max_arr_ndim, final_size = next(idxs_ndims) + for index, ndim, size in idxs_ndims: + final_size += size + if ndim > max_arr_ndim: + max_arr_ndim = ndim + if len(index) != len(first_index): + raise ValueError( + "List depths are mismatched. First element was at depth " + "{}, but there is an element at depth {} ({})".format( + len(first_index), + len(index), + _block_format_index(index) + ) + ) + # propagate our flag that indicates an empty list at the bottom + if index[-1] is None: + first_index = index + + return first_index, max_arr_ndim, final_size + elif type(arrays) is list and len(arrays) == 0: + # We've 'bottomed out' on an empty list + return parent_index + [None], 0, 0 + else: + # We've 'bottomed out' - arrays is either a scalar or an array + size = _size(arrays) + return parent_index, _ndim(arrays), size + + +def _atleast_nd(a, ndim): + # Ensures `a` has at least `ndim` dimensions by prepending + # ones to `a.shape` as necessary + return array(a, ndmin=ndim, copy=None, subok=True) + + +def _accumulate(values): + return list(itertools.accumulate(values)) + + +def _concatenate_shapes(shapes, axis): + """Given array shapes, return the resulting shape and slices prefixes. + + These help in nested concatenation. + + Returns + ------- + shape: tuple of int + This tuple satisfies:: + + shape, _ = _concatenate_shapes([arr.shape for shape in arrs], axis) + shape == concatenate(arrs, axis).shape + + slice_prefixes: tuple of (slice(start, end), ) + For a list of arrays being concatenated, this returns the slice + in the larger array at axis that needs to be sliced into. + + For example, the following holds:: + + ret = concatenate([a, b, c], axis) + _, (sl_a, sl_b, sl_c) = concatenate_slices([a, b, c], axis) + + ret[(slice(None),) * axis + sl_a] == a + ret[(slice(None),) * axis + sl_b] == b + ret[(slice(None),) * axis + sl_c] == c + + These are called slice prefixes since they are used in the recursive + blocking algorithm to compute the left-most slices during the + recursion. Therefore, they must be prepended to rest of the slice + that was computed deeper in the recursion. + + These are returned as tuples to ensure that they can quickly be added + to existing slice tuple without creating a new tuple every time. + + """ + # Cache a result that will be reused. + shape_at_axis = [shape[axis] for shape in shapes] + + # Take a shape, any shape + first_shape = shapes[0] + first_shape_pre = first_shape[:axis] + first_shape_post = first_shape[axis+1:] + + if any(shape[:axis] != first_shape_pre or + shape[axis+1:] != first_shape_post for shape in shapes): + raise ValueError( + 'Mismatched array shapes in block along axis {}.'.format(axis)) + + shape = (first_shape_pre + (sum(shape_at_axis),) + first_shape[axis+1:]) + + offsets_at_axis = _accumulate(shape_at_axis) + slice_prefixes = [(slice(start, end),) + for start, end in zip([0] + offsets_at_axis, + offsets_at_axis)] + return shape, slice_prefixes + + +def _block_info_recursion(arrays, max_depth, result_ndim, depth=0): + """ + Returns the shape of the final array, along with a list + of slices and a list of arrays that can be used for assignment inside the + new array + + Parameters + ---------- + arrays : nested list of arrays + The arrays to check + max_depth : list of int + The number of nested lists + result_ndim : int + The number of dimensions in thefinal array. + + Returns + ------- + shape : tuple of int + The shape that the final array will take on. + slices: list of tuple of slices + The slices into the full array required for assignment. These are + required to be prepended with ``(Ellipsis, )`` to obtain to correct + final index. + arrays: list of ndarray + The data to assign to each slice of the full array + + """ + if depth < max_depth: + shapes, slices, arrays = zip( + *[_block_info_recursion(arr, max_depth, result_ndim, depth+1) + for arr in arrays]) + + axis = result_ndim - max_depth + depth + shape, slice_prefixes = _concatenate_shapes(shapes, axis) + + # Prepend the slice prefix and flatten the slices + slices = [slice_prefix + the_slice + for slice_prefix, inner_slices in zip(slice_prefixes, slices) + for the_slice in inner_slices] + + # Flatten the array list + arrays = functools.reduce(operator.add, arrays) + + return shape, slices, arrays + else: + # We've 'bottomed out' - arrays is either a scalar or an array + # type(arrays) is not list + # Return the slice and the array inside a list to be consistent with + # the recursive case. + arr = _atleast_nd(arrays, result_ndim) + return arr.shape, [()], [arr] + + +def _block(arrays, max_depth, result_ndim, depth=0): + """ + Internal implementation of block based on repeated concatenation. + `arrays` is the argument passed to + block. `max_depth` is the depth of nested lists within `arrays` and + `result_ndim` is the greatest of the dimensions of the arrays in + `arrays` and the depth of the lists in `arrays` (see block docstring + for details). + """ + if depth < max_depth: + arrs = [_block(arr, max_depth, result_ndim, depth+1) + for arr in arrays] + return _concatenate(arrs, axis=-(max_depth-depth)) + else: + # We've 'bottomed out' - arrays is either a scalar or an array + # type(arrays) is not list + return _atleast_nd(arrays, result_ndim) + + +def _block_dispatcher(arrays): + # Use type(...) is list to match the behavior of np.block(), which special + # cases list specifically rather than allowing for generic iterables or + # tuple. Also, we know that list.__array_function__ will never exist. + if type(arrays) is list: + for subarrays in arrays: + yield from _block_dispatcher(subarrays) + else: + yield arrays + + +@array_function_dispatch(_block_dispatcher) +def block(arrays): + """ + Assemble an nd-array from nested lists of blocks. + + Blocks in the innermost lists are concatenated (see `concatenate`) along + the last dimension (-1), then these are concatenated along the + second-last dimension (-2), and so on until the outermost list is reached. + + Blocks can be of any dimension, but will not be broadcasted using + the normal rules. Instead, leading axes of size 1 are inserted, + to make ``block.ndim`` the same for all blocks. This is primarily useful + for working with scalars, and means that code like ``np.block([v, 1])`` + is valid, where ``v.ndim == 1``. + + When the nested list is two levels deep, this allows block matrices to be + constructed from their components. + + .. versionadded:: 1.13.0 + + Parameters + ---------- + arrays : nested list of array_like or scalars (but not tuples) + If passed a single ndarray or scalar (a nested list of depth 0), this + is returned unmodified (and not copied). + + Elements shapes must match along the appropriate axes (without + broadcasting), but leading 1s will be prepended to the shape as + necessary to make the dimensions match. + + Returns + ------- + block_array : ndarray + The array assembled from the given blocks. + + The dimensionality of the output is equal to the greatest of: + + * the dimensionality of all the inputs + * the depth to which the input list is nested + + Raises + ------ + ValueError + * If list depths are mismatched - for instance, ``[[a, b], c]`` is + illegal, and should be spelt ``[[a, b], [c]]`` + * If lists are empty - for instance, ``[[a, b], []]`` + + See Also + -------- + concatenate : Join a sequence of arrays along an existing axis. + stack : Join a sequence of arrays along a new axis. + vstack : Stack arrays in sequence vertically (row wise). + hstack : Stack arrays in sequence horizontally (column wise). + dstack : Stack arrays in sequence depth wise (along third axis). + column_stack : Stack 1-D arrays as columns into a 2-D array. + vsplit : Split an array into multiple sub-arrays vertically (row-wise). + + Notes + ----- + + When called with only scalars, ``np.block`` is equivalent to an ndarray + call. So ``np.block([[1, 2], [3, 4]])`` is equivalent to + ``np.array([[1, 2], [3, 4]])``. + + This function does not enforce that the blocks lie on a fixed grid. + ``np.block([[a, b], [c, d]])`` is not restricted to arrays of the form:: + + AAAbb + AAAbb + cccDD + + But is also allowed to produce, for some ``a, b, c, d``:: + + AAAbb + AAAbb + cDDDD + + Since concatenation happens along the last axis first, `block` is *not* + capable of producing the following directly:: + + AAAbb + cccbb + cccDD + + Matlab's "square bracket stacking", ``[A, B, ...; p, q, ...]``, is + equivalent to ``np.block([[A, B, ...], [p, q, ...]])``. + + Examples + -------- + The most common use of this function is to build a block matrix + + >>> A = np.eye(2) * 2 + >>> B = np.eye(3) * 3 + >>> np.block([ + ... [A, np.zeros((2, 3))], + ... [np.ones((3, 2)), B ] + ... ]) + array([[2., 0., 0., 0., 0.], + [0., 2., 0., 0., 0.], + [1., 1., 3., 0., 0.], + [1., 1., 0., 3., 0.], + [1., 1., 0., 0., 3.]]) + + With a list of depth 1, `block` can be used as `hstack` + + >>> np.block([1, 2, 3]) # hstack([1, 2, 3]) + array([1, 2, 3]) + + >>> a = np.array([1, 2, 3]) + >>> b = np.array([4, 5, 6]) + >>> np.block([a, b, 10]) # hstack([a, b, 10]) + array([ 1, 2, 3, 4, 5, 6, 10]) + + >>> A = np.ones((2, 2), int) + >>> B = 2 * A + >>> np.block([A, B]) # hstack([A, B]) + array([[1, 1, 2, 2], + [1, 1, 2, 2]]) + + With a list of depth 2, `block` can be used in place of `vstack`: + + >>> a = np.array([1, 2, 3]) + >>> b = np.array([4, 5, 6]) + >>> np.block([[a], [b]]) # vstack([a, b]) + array([[1, 2, 3], + [4, 5, 6]]) + + >>> A = np.ones((2, 2), int) + >>> B = 2 * A + >>> np.block([[A], [B]]) # vstack([A, B]) + array([[1, 1], + [1, 1], + [2, 2], + [2, 2]]) + + It can also be used in places of `atleast_1d` and `atleast_2d` + + >>> a = np.array(0) + >>> b = np.array([1]) + >>> np.block([a]) # atleast_1d(a) + array([0]) + >>> np.block([b]) # atleast_1d(b) + array([1]) + + >>> np.block([[a]]) # atleast_2d(a) + array([[0]]) + >>> np.block([[b]]) # atleast_2d(b) + array([[1]]) + + + """ + arrays, list_ndim, result_ndim, final_size = _block_setup(arrays) + + # It was found through benchmarking that making an array of final size + # around 256x256 was faster by straight concatenation on a + # i7-7700HQ processor and dual channel ram 2400MHz. + # It didn't seem to matter heavily on the dtype used. + # + # A 2D array using repeated concatenation requires 2 copies of the array. + # + # The fastest algorithm will depend on the ratio of CPU power to memory + # speed. + # One can monitor the results of the benchmark + # https://pv.github.io/numpy-bench/#bench_shape_base.Block2D.time_block2d + # to tune this parameter until a C version of the `_block_info_recursion` + # algorithm is implemented which would likely be faster than the python + # version. + if list_ndim * final_size > (2 * 512 * 512): + return _block_slicing(arrays, list_ndim, result_ndim) + else: + return _block_concatenate(arrays, list_ndim, result_ndim) + + +# These helper functions are mostly used for testing. +# They allow us to write tests that directly call `_block_slicing` +# or `_block_concatenate` without blocking large arrays to force the wisdom +# to trigger the desired path. +def _block_setup(arrays): + """ + Returns + (`arrays`, list_ndim, result_ndim, final_size) + """ + bottom_index, arr_ndim, final_size = _block_check_depths_match(arrays) + list_ndim = len(bottom_index) + if bottom_index and bottom_index[-1] is None: + raise ValueError( + 'List at {} cannot be empty'.format( + _block_format_index(bottom_index) + ) + ) + result_ndim = max(arr_ndim, list_ndim) + return arrays, list_ndim, result_ndim, final_size + + +def _block_slicing(arrays, list_ndim, result_ndim): + shape, slices, arrays = _block_info_recursion( + arrays, list_ndim, result_ndim) + dtype = _nx.result_type(*[arr.dtype for arr in arrays]) + + # Test preferring F only in the case that all input arrays are F + F_order = all(arr.flags['F_CONTIGUOUS'] for arr in arrays) + C_order = all(arr.flags['C_CONTIGUOUS'] for arr in arrays) + order = 'F' if F_order and not C_order else 'C' + result = _nx.empty(shape=shape, dtype=dtype, order=order) + # Note: In a c implementation, the function + # PyArray_CreateMultiSortedStridePerm could be used for more advanced + # guessing of the desired order. + + for the_slice, arr in zip(slices, arrays): + result[(Ellipsis,) + the_slice] = arr + return result + + +def _block_concatenate(arrays, list_ndim, result_ndim): + result = _block(arrays, list_ndim, result_ndim) + if list_ndim == 0: + # Catch an edge case where _block returns a view because + # `arrays` is a single numpy array and not a list of numpy arrays. + # This might copy scalars or lists twice, but this isn't a likely + # usecase for those interested in performance + result = result.copy() + return result diff --git a/venv/lib/python3.12/site-packages/numpy/_core/shape_base.pyi b/venv/lib/python3.12/site-packages/numpy/_core/shape_base.pyi new file mode 100644 index 0000000000000000000000000000000000000000..8cf604b7358d45bf896bd2c162f2ef86b7eee422 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/shape_base.pyi @@ -0,0 +1,123 @@ +from collections.abc import Sequence +from typing import TypeVar, overload, Any, SupportsIndex + +from numpy import generic, _CastingKind +from numpy._typing import ( + NDArray, + ArrayLike, + DTypeLike, + _ArrayLike, + _DTypeLike, +) + +_SCT = TypeVar("_SCT", bound=generic) +_ArrayType = TypeVar("_ArrayType", bound=NDArray[Any]) + +__all__: list[str] + +@overload +def atleast_1d(arys: _ArrayLike[_SCT], /) -> NDArray[_SCT]: ... +@overload +def atleast_1d(arys: ArrayLike, /) -> NDArray[Any]: ... +@overload +def atleast_1d(*arys: ArrayLike) -> tuple[NDArray[Any], ...]: ... + +@overload +def atleast_2d(arys: _ArrayLike[_SCT], /) -> NDArray[_SCT]: ... +@overload +def atleast_2d(arys: ArrayLike, /) -> NDArray[Any]: ... +@overload +def atleast_2d(*arys: ArrayLike) -> tuple[NDArray[Any], ...]: ... + +@overload +def atleast_3d(arys: _ArrayLike[_SCT], /) -> NDArray[_SCT]: ... +@overload +def atleast_3d(arys: ArrayLike, /) -> NDArray[Any]: ... +@overload +def atleast_3d(*arys: ArrayLike) -> tuple[NDArray[Any], ...]: ... + +@overload +def vstack( + tup: Sequence[_ArrayLike[_SCT]], + *, + dtype: None = ..., + casting: _CastingKind = ... +) -> NDArray[_SCT]: ... +@overload +def vstack( + tup: Sequence[ArrayLike], + *, + dtype: _DTypeLike[_SCT], + casting: _CastingKind = ... +) -> NDArray[_SCT]: ... +@overload +def vstack( + tup: Sequence[ArrayLike], + *, + dtype: DTypeLike = ..., + casting: _CastingKind = ... +) -> NDArray[Any]: ... + +@overload +def hstack( + tup: Sequence[_ArrayLike[_SCT]], + *, + dtype: None = ..., + casting: _CastingKind = ... +) -> NDArray[_SCT]: ... +@overload +def hstack( + tup: Sequence[ArrayLike], + *, + dtype: _DTypeLike[_SCT], + casting: _CastingKind = ... +) -> NDArray[_SCT]: ... +@overload +def hstack( + tup: Sequence[ArrayLike], + *, + dtype: DTypeLike = ..., + casting: _CastingKind = ... +) -> NDArray[Any]: ... + +@overload +def stack( + arrays: Sequence[_ArrayLike[_SCT]], + axis: SupportsIndex = ..., + out: None = ..., + *, + dtype: None = ..., + casting: _CastingKind = ... +) -> NDArray[_SCT]: ... +@overload +def stack( + arrays: Sequence[ArrayLike], + axis: SupportsIndex = ..., + out: None = ..., + *, + dtype: _DTypeLike[_SCT], + casting: _CastingKind = ... +) -> NDArray[_SCT]: ... +@overload +def stack( + arrays: Sequence[ArrayLike], + axis: SupportsIndex = ..., + out: None = ..., + *, + dtype: DTypeLike = ..., + casting: _CastingKind = ... +) -> NDArray[Any]: ... +@overload +def stack( + arrays: Sequence[ArrayLike], + axis: SupportsIndex = ..., + out: _ArrayType = ..., + *, + dtype: DTypeLike = ..., + casting: _CastingKind = ... +) -> _ArrayType: ... + +@overload +def block(arrays: _ArrayLike[_SCT]) -> NDArray[_SCT]: ... +@overload +def block(arrays: ArrayLike) -> NDArray[Any]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/_core/strings.py b/venv/lib/python3.12/site-packages/numpy/_core/strings.py new file mode 100644 index 0000000000000000000000000000000000000000..28622b6a5c3ec40b4eb91ac9c21253081d8497c5 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/strings.py @@ -0,0 +1,1410 @@ +""" +This module contains a set of functions for vectorized string +operations. +""" + +import sys +import numpy as np +from numpy import ( + equal, not_equal, less, less_equal, greater, greater_equal, + add, multiply as _multiply_ufunc, +) +from numpy._core.multiarray import _vec_string +from numpy._core.umath import ( + isalpha, + isdigit, + isspace, + isalnum, + islower, + isupper, + istitle, + isdecimal, + isnumeric, + str_len, + find as _find_ufunc, + rfind as _rfind_ufunc, + index as _index_ufunc, + rindex as _rindex_ufunc, + count as _count_ufunc, + startswith as _startswith_ufunc, + endswith as _endswith_ufunc, + _lstrip_whitespace, + _lstrip_chars, + _rstrip_whitespace, + _rstrip_chars, + _strip_whitespace, + _strip_chars, + _replace, + _expandtabs_length, + _expandtabs, +) + + +__all__ = [ + # UFuncs + "equal", "not_equal", "less", "less_equal", "greater", "greater_equal", + "add", "multiply", "isalpha", "isdigit", "isspace", "isalnum", "islower", + "isupper", "istitle", "isdecimal", "isnumeric", "str_len", "find", + "rfind", "index", "rindex", "count", "startswith", "endswith", "lstrip", + "rstrip", "strip", "replace", "expandtabs", "center", "ljust", "rjust", + "zfill", + + # _vec_string - Will gradually become ufuncs as well + "upper", "lower", "swapcase", "capitalize", "title", + + # _vec_string - Will probably not become ufuncs + "mod", "decode", "encode", "translate", + + # Removed from namespace until behavior has been crystalized + # "join", "split", "rsplit", "splitlines", "partition", "rpartition", +] + + +MAX = np.iinfo(np.int64).max + + +def _get_num_chars(a): + """ + Helper function that returns the number of characters per field in + a string or unicode array. This is to abstract out the fact that + for a unicode array this is itemsize / 4. + """ + if issubclass(a.dtype.type, np.str_): + return a.itemsize // 4 + return a.itemsize + + +def _to_bytes_or_str_array(result, output_dtype_like): + """ + Helper function to cast a result back into an array + with the appropriate dtype if an object array must be used + as an intermediary. + """ + output_dtype_like = np.asarray(output_dtype_like) + if result.size == 0: + # Calling asarray & tolist in an empty array would result + # in losing shape information + return result.astype(output_dtype_like.dtype) + ret = np.asarray(result.tolist()) + if isinstance(output_dtype_like.dtype, np.dtypes.StringDType): + return ret.astype(type(output_dtype_like.dtype)) + return ret.astype(type(output_dtype_like.dtype)(_get_num_chars(ret))) + + +def _clean_args(*args): + """ + Helper function for delegating arguments to Python string + functions. + + Many of the Python string operations that have optional arguments + do not use 'None' to indicate a default value. In these cases, + we need to remove all None arguments, and those following them. + """ + newargs = [] + for chk in args: + if chk is None: + break + newargs.append(chk) + return newargs + + +def multiply(a, i): + """ + Return (a * i), that is string multiple concatenation, + element-wise. + + Values in ``i`` of less than 0 are treated as 0 (which yields an + empty string). + + Parameters + ---------- + a : array_like, with ``StringDType``, ``bytes_`` or ``str_`` dtype + + i : array_like, with any integer dtype + + Returns + ------- + out : ndarray + Output array of ``StringDType``, ``bytes_`` or ``str_`` dtype, + depending on input types + + Examples + -------- + >>> a = np.array(["a", "b", "c"]) + >>> np.strings.multiply(a, 3) + array(['aaa', 'bbb', 'ccc'], dtype='>> i = np.array([1, 2, 3]) + >>> np.strings.multiply(a, i) + array(['a', 'bb', 'ccc'], dtype='>> np.strings.multiply(np.array(['a']), i) + array(['a', 'aa', 'aaa'], dtype='>> a = np.array(['a', 'b', 'c', 'd', 'e', 'f']).reshape((2, 3)) + >>> np.strings.multiply(a, 3) + array([['aaa', 'bbb', 'ccc'], + ['ddd', 'eee', 'fff']], dtype='>> np.strings.multiply(a, i) + array([['a', 'bb', 'ccc'], + ['d', 'ee', 'fff']], dtype=' sys.maxsize / np.maximum(i, 1)): + raise MemoryError("repeated string is too long") + + buffersizes = a_len * i + out_dtype = f"{a.dtype.char}{buffersizes.max()}" + out = np.empty_like(a, shape=buffersizes.shape, dtype=out_dtype) + return _multiply_ufunc(a, i, out=out) + + +def mod(a, values): + """ + Return (a % i), that is pre-Python 2.6 string formatting + (interpolation), element-wise for a pair of array_likes of str + or unicode. + + Parameters + ---------- + a : array_like, with ``StringDType``, ``bytes_`` or ``str_`` dtype + + values : array_like of values + These values will be element-wise interpolated into the string. + + Returns + ------- + out : ndarray + Output array of ``StringDType``, ``bytes_`` or ``str_`` dtype, + depending on input types + + """ + return _to_bytes_or_str_array( + _vec_string(a, np.object_, '__mod__', (values,)), a) + + +def find(a, sub, start=0, end=None): + """ + For each element, return the lowest index in the string where + substring ``sub`` is found, such that ``sub`` is contained in the + range [``start``, ``end``). + + Parameters + ---------- + a : array_like, with ``StringDType``, ``bytes_`` or ``str_`` dtype + + sub : array_like, with `np.bytes_` or `np.str_` dtype + The substring to search for. + + start, end : array_like, with any integer dtype + The range to look in, interpreted as in slice notation. + + Returns + ------- + y : ndarray + Output array of ints + + See Also + -------- + str.find + + Examples + -------- + >>> a = np.array(["NumPy is a Python library"]) + >>> np.strings.find(a, "Python") + array([11]) + + """ + end = end if end is not None else MAX + return _find_ufunc(a, sub, start, end) + + +def rfind(a, sub, start=0, end=None): + """ + For each element, return the highest index in the string where + substring ``sub`` is found, such that ``sub`` is contained in the + range [``start``, ``end``). + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + sub : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + The substring to search for. + + start, end : array_like, with any integer dtype + The range to look in, interpreted as in slice notation. + + Returns + ------- + y : ndarray + Output array of ints + + See Also + -------- + str.rfind + + """ + end = end if end is not None else MAX + return _rfind_ufunc(a, sub, start, end) + + +def index(a, sub, start=0, end=None): + """ + Like `find`, but raises :exc:`ValueError` when the substring is not found. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + sub : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + start, end : array_like, with any integer dtype, optional + + Returns + ------- + out : ndarray + Output array of ints. + + See Also + -------- + find, str.index + + Examples + -------- + >>> a = np.array(["Computer Science"]) + >>> np.strings.index(a, "Science", start=0, end=None) + array([9]) + + """ + end = end if end is not None else MAX + return _index_ufunc(a, sub, start, end) + + +def rindex(a, sub, start=0, end=None): + """ + Like `rfind`, but raises :exc:`ValueError` when the substring `sub` is + not found. + + Parameters + ---------- + a : array_like, with ``StringDType``, ``bytes_`` or ``str_`` dtype + + sub : array_like, with ``StringDType``, ``bytes_`` or ``str_`` dtype + + start, end : array-like, with any integer dtype, optional + + Returns + ------- + out : ndarray + Output array of ints. + + See Also + -------- + rfind, str.rindex + + Examples + -------- + >>> a = np.array(["Computer Science"]) + >>> np.strings.rindex(a, "Science", start=0, end=None) + array([9]) + + """ + end = end if end is not None else MAX + return _rindex_ufunc(a, sub, start, end) + + +def count(a, sub, start=0, end=None): + """ + Returns an array with the number of non-overlapping occurrences of + substring ``sub`` in the range [``start``, ``end``). + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + sub : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + The substring to search for. + + start, end : array_like, with any integer dtype + The range to look in, interpreted as in slice notation. + + Returns + ------- + y : ndarray + Output array of ints + + See Also + -------- + str.count + + Examples + -------- + >>> c = np.array(['aAaAaA', ' aA ', 'abBABba']) + >>> c + array(['aAaAaA', ' aA ', 'abBABba'], dtype='>> np.strings.count(c, 'A') + array([3, 1, 1]) + >>> np.strings.count(c, 'aA') + array([3, 1, 0]) + >>> np.strings.count(c, 'A', start=1, end=4) + array([2, 1, 1]) + >>> np.strings.count(c, 'A', start=1, end=3) + array([1, 0, 0]) + + """ + end = end if end is not None else MAX + return _count_ufunc(a, sub, start, end) + + +def startswith(a, prefix, start=0, end=None): + """ + Returns a boolean array which is `True` where the string element + in ``a`` starts with ``prefix``, otherwise `False`. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + prefix : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + start, end : array_like, with any integer dtype + With ``start``, test beginning at that position. With ``end``, + stop comparing at that position. + + Returns + ------- + out : ndarray + Output array of bools + + See Also + -------- + str.startswith + + """ + end = end if end is not None else MAX + return _startswith_ufunc(a, prefix, start, end) + + +def endswith(a, suffix, start=0, end=None): + """ + Returns a boolean array which is `True` where the string element + in ``a`` ends with ``suffix``, otherwise `False`. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + suffix : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + start, end : array_like, with any integer dtype + With ``start``, test beginning at that position. With ``end``, + stop comparing at that position. + + Returns + ------- + out : ndarray + Output array of bools + + See Also + -------- + str.endswith + + Examples + -------- + >>> s = np.array(['foo', 'bar']) + >>> s + array(['foo', 'bar'], dtype='>> np.strings.endswith(s, 'ar') + array([False, True]) + >>> np.strings.endswith(s, 'a', start=1, end=2) + array([False, True]) + + """ + end = end if end is not None else MAX + return _endswith_ufunc(a, suffix, start, end) + + +def decode(a, encoding=None, errors=None): + r""" + Calls :meth:`bytes.decode` element-wise. + + The set of available codecs comes from the Python standard library, + and may be extended at runtime. For more information, see the + :mod:`codecs` module. + + Parameters + ---------- + a : array_like, with ``bytes_`` dtype + + encoding : str, optional + The name of an encoding + + errors : str, optional + Specifies how to handle encoding errors + + Returns + ------- + out : ndarray + + See Also + -------- + :py:meth:`bytes.decode` + + Notes + ----- + The type of the result will depend on the encoding specified. + + Examples + -------- + >>> c = np.array([b'\x81\xc1\x81\xc1\x81\xc1', b'@@\x81\xc1@@', + ... b'\x81\x82\xc2\xc1\xc2\x82\x81']) + >>> c + array([b'\x81\xc1\x81\xc1\x81\xc1', b'@@\x81\xc1@@', + b'\x81\x82\xc2\xc1\xc2\x82\x81'], dtype='|S7') + >>> np.strings.decode(c, encoding='cp037') + array(['aAaAaA', ' aA ', 'abBABba'], dtype='>> a = np.array(['aAaAaA', ' aA ', 'abBABba']) + >>> np.strings.encode(a, encoding='cp037') + array([b'\x81\xc1\x81\xc1\x81\xc1', b'@@\x81\xc1@@', + b'\x81\x82\xc2\xc1\xc2\x82\x81'], dtype='|S7') + + """ + return _to_bytes_or_str_array( + _vec_string(a, np.object_, 'encode', _clean_args(encoding, errors)), + np.bytes_(b'')) + + +def expandtabs(a, tabsize=8): + """ + Return a copy of each string element where all tab characters are + replaced by one or more spaces. + + Calls :meth:`str.expandtabs` element-wise. + + Return a copy of each string element where all tab characters are + replaced by one or more spaces, depending on the current column + and the given `tabsize`. The column number is reset to zero after + each newline occurring in the string. This doesn't understand other + non-printing characters or escape sequences. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + Input array + tabsize : int, optional + Replace tabs with `tabsize` number of spaces. If not given defaults + to 8 spaces. + + Returns + ------- + out : ndarray + Output array of ``StringDType``, ``bytes_`` or ``str_`` dtype, + depending on input type + + See Also + -------- + str.expandtabs + + Examples + -------- + >>> a = np.array(['\t\tHello\tworld']) + >>> np.strings.expandtabs(a, tabsize=4) # doctest: +SKIP + array([' Hello world'], dtype='>> c = np.array(['a1b2','1b2a','b2a1','2a1b']); c + array(['a1b2', '1b2a', 'b2a1', '2a1b'], dtype='>> np.strings.center(c, width=9) + array([' a1b2 ', ' 1b2a ', ' b2a1 ', ' 2a1b '], dtype='>> np.strings.center(c, width=9, fillchar='*') + array(['***a1b2**', '***1b2a**', '***b2a1**', '***2a1b**'], dtype='>> np.strings.center(c, width=1) + array(['a', '1', 'b', '2'], dtype='>> c = np.array(['aAaAaA', ' aA ', 'abBABba']) + >>> np.strings.ljust(c, width=3) + array(['aAa', ' a', 'abB'], dtype='>> a = np.array(['aAaAaA', ' aA ', 'abBABba']) + >>> np.strings.rjust(a, width=3) + array(['aAa', ' a', 'abB'], dtype='>> c = np.array(['aAaAaA', ' aA ', 'abBABba']) + >>> c + array(['aAaAaA', ' aA ', 'abBABba'], dtype='>> np.strings.lstrip(c, 'a') + array(['AaAaA', ' aA ', 'bBABba'], dtype='>> np.strings.lstrip(c, 'A') # leaves c unchanged + array(['aAaAaA', ' aA ', 'abBABba'], dtype='>> (np.strings.lstrip(c, ' ') == np.strings.lstrip(c, '')).all() + np.False_ + >>> (np.strings.lstrip(c, ' ') == np.strings.lstrip(c)).all() + np.True_ + + """ + if chars is None: + return _lstrip_whitespace(a) + return _lstrip_chars(a, chars) + + +def rstrip(a, chars=None): + """ + For each element in `a`, return a copy with the trailing characters + removed. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + chars : scalar with the same dtype as ``a``, optional + The ``chars`` argument is a string specifying the set of + characters to be removed. If ``None``, the ``chars`` + argument defaults to removing whitespace. The ``chars`` argument + is not a prefix or suffix; rather, all combinations of its + values are stripped. + + Returns + ------- + out : ndarray + Output array of ``StringDType``, ``bytes_`` or ``str_`` dtype, + depending on input types + + See Also + -------- + str.rstrip + + Examples + -------- + >>> c = np.array(['aAaAaA', 'abBABba']) + >>> c + array(['aAaAaA', 'abBABba'], dtype='>> np.strings.rstrip(c, 'a') + array(['aAaAaA', 'abBABb'], dtype='>> np.strings.rstrip(c, 'A') + array(['aAaAa', 'abBABba'], dtype='>> c = np.array(['aAaAaA', ' aA ', 'abBABba']) + >>> c + array(['aAaAaA', ' aA ', 'abBABba'], dtype='>> np.strings.strip(c) + array(['aAaAaA', 'aA', 'abBABba'], dtype='>> np.strings.strip(c, 'a') + array(['AaAaA', ' aA ', 'bBABb'], dtype='>> np.strings.strip(c, 'A') + array(['aAaAa', ' aA ', 'abBABba'], dtype='>> np.strings.zfill('1', 3) + array('001', dtype='>> c = np.array(['a1b c', '1bca', 'bca1']); c + array(['a1b c', '1bca', 'bca1'], dtype='>> np.strings.upper(c) + array(['A1B C', '1BCA', 'BCA1'], dtype='>> c = np.array(['A1B C', '1BCA', 'BCA1']); c + array(['A1B C', '1BCA', 'BCA1'], dtype='>> np.strings.lower(c) + array(['a1b c', '1bca', 'bca1'], dtype='>> c=np.array(['a1B c','1b Ca','b Ca1','cA1b'],'S5'); c + array(['a1B c', '1b Ca', 'b Ca1', 'cA1b'], + dtype='|S5') + >>> np.strings.swapcase(c) + array(['A1b C', '1B cA', 'B cA1', 'Ca1B'], + dtype='|S5') + + """ + a_arr = np.asarray(a) + return _vec_string(a_arr, a_arr.dtype, 'swapcase') + + +def capitalize(a): + """ + Return a copy of ``a`` with only the first character of each element + capitalized. + + Calls :meth:`str.capitalize` element-wise. + + For byte strings, this method is locale-dependent. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + Input array of strings to capitalize. + + Returns + ------- + out : ndarray + Output array of ``StringDType``, ``bytes_`` or ``str_`` dtype, + depending on input types + + See Also + -------- + str.capitalize + + Examples + -------- + >>> c = np.array(['a1b2','1b2a','b2a1','2a1b'],'S4'); c + array(['a1b2', '1b2a', 'b2a1', '2a1b'], + dtype='|S4') + >>> np.strings.capitalize(c) + array(['A1b2', '1b2a', 'B2a1', '2a1b'], + dtype='|S4') + + """ + a_arr = np.asarray(a) + return _vec_string(a_arr, a_arr.dtype, 'capitalize') + + +def title(a): + """ + Return element-wise title cased version of string or unicode. + + Title case words start with uppercase characters, all remaining cased + characters are lowercase. + + Calls :meth:`str.title` element-wise. + + For 8-bit strings, this method is locale-dependent. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + Input array. + + Returns + ------- + out : ndarray + Output array of ``StringDType``, ``bytes_`` or ``str_`` dtype, + depending on input types + + See Also + -------- + str.title + + Examples + -------- + >>> c=np.array(['a1b c','1b ca','b ca1','ca1b'],'S5'); c + array(['a1b c', '1b ca', 'b ca1', 'ca1b'], + dtype='|S5') + >>> np.strings.title(c) + array(['A1B C', '1B Ca', 'B Ca1', 'Ca1B'], + dtype='|S5') + + """ + a_arr = np.asarray(a) + return _vec_string(a_arr, a_arr.dtype, 'title') + + +def replace(a, old, new, count=-1): + """ + For each element in ``a``, return a copy of the string with + occurrences of substring ``old`` replaced by ``new``. + + Parameters + ---------- + a : array_like, with ``bytes_`` or ``str_`` dtype + + old, new : array_like, with ``bytes_`` or ``str_`` dtype + + count : array_like, with ``int_`` dtype + If the optional argument ``count`` is given, only the first + ``count`` occurrences are replaced. + + Returns + ------- + out : ndarray + Output array of ``StringDType``, ``bytes_`` or ``str_`` dtype, + depending on input types + + See Also + -------- + str.replace + + Examples + -------- + >>> a = np.array(["That is a mango", "Monkeys eat mangos"]) + >>> np.strings.replace(a, 'mango', 'banana') + array(['That is a banana', 'Monkeys eat bananas'], dtype='>> a = np.array(["The dish is fresh", "This is it"]) + >>> np.strings.replace(a, 'is', 'was') + array(['The dwash was fresh', 'Thwas was it'], dtype='>> np.strings.join('-', 'osd') # doctest: +SKIP + array('o-s-d', dtype='>> np.strings.join(['-', '.'], ['ghc', 'osd']) # doctest: +SKIP + array(['g-h-c', 'o.s.d'], dtype='>> x = np.array("Numpy is nice!") + >>> np.strings.split(x, " ") # doctest: +SKIP + array(list(['Numpy', 'is', 'nice!']), dtype=object) # doctest: +SKIP + + >>> np.strings.split(x, " ", 1) # doctest: +SKIP + array(list(['Numpy', 'is nice!']), dtype=object) # doctest: +SKIP + + See Also + -------- + str.split, rsplit + + """ + # This will return an array of lists of different sizes, so we + # leave it as an object array + return _vec_string( + a, np.object_, 'split', [sep] + _clean_args(maxsplit)) + + +def _rsplit(a, sep=None, maxsplit=None): + """ + For each element in `a`, return a list of the words in the + string, using `sep` as the delimiter string. + + Calls :meth:`str.rsplit` element-wise. + + Except for splitting from the right, `rsplit` + behaves like `split`. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + sep : str or unicode, optional + If `sep` is not specified or None, any whitespace string + is a separator. + maxsplit : int, optional + If `maxsplit` is given, at most `maxsplit` splits are done, + the rightmost ones. + + Returns + ------- + out : ndarray + Array of list objects + + See Also + -------- + str.rsplit, split + + Examples + -------- + >>> a = np.array(['aAaAaA', 'abBABba']) + >>> np.strings.rsplit(a, 'A') # doctest: +SKIP + array([list(['a', 'a', 'a', '']), # doctest: +SKIP + list(['abB', 'Bba'])], dtype=object) # doctest: +SKIP + + """ + # This will return an array of lists of different sizes, so we + # leave it as an object array + return _vec_string( + a, np.object_, 'rsplit', [sep] + _clean_args(maxsplit)) + + +def _splitlines(a, keepends=None): + """ + For each element in `a`, return a list of the lines in the + element, breaking at line boundaries. + + Calls :meth:`str.splitlines` element-wise. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + + keepends : bool, optional + Line breaks are not included in the resulting list unless + keepends is given and true. + + Returns + ------- + out : ndarray + Array of list objects + + See Also + -------- + str.splitlines + + """ + return _vec_string( + a, np.object_, 'splitlines', _clean_args(keepends)) + + +def _partition(a, sep): + """ + Partition each element in `a` around `sep`. + + Calls :meth:`str.partition` element-wise. + + For each element in `a`, split the element as the first + occurrence of `sep`, and return 3 strings containing the part + before the separator, the separator itself, and the part after + the separator. If the separator is not found, return 3 strings + containing the string itself, followed by two empty strings. + + Parameters + ---------- + a : array-like, with ``StringDType``, ``bytes_``, or ``str_`` dtype + Input array + sep : {str, unicode} + Separator to split each string element in `a`. + + Returns + ------- + out : ndarray + Output array of ``StringDType``, ``bytes_`` or ``str_`` dtype, + depending on input types. The output array will have an extra + dimension with 3 elements per input element. + + Examples + -------- + >>> x = np.array(["Numpy is nice!"]) + >>> np.strings.partition(x, " ") # doctest: +SKIP + array([['Numpy', ' ', 'is nice!']], dtype='>> a = np.array(['aAaAaA', ' aA ', 'abBABba']) + >>> np.strings.rpartition(a, 'A') # doctest: +SKIP + array([['aAaAa', 'A', ''], # doctest: +SKIP + [' a', 'A', ' '], # doctest: +SKIP + ['abB', 'A', 'Bba']], dtype='>> a = np.array(['a1b c', '1bca', 'bca1']) + >>> table = a[0].maketrans('abc', '123') + >>> deletechars = ' ' + >>> np.char.translate(a, table, deletechars) + array(['112 3', '1231', '2311'], dtype=' NDArray[np.bool]: ... +@overload +def equal(x1: S_co, x2: S_co) -> NDArray[np.bool]: ... + +@overload +def not_equal(x1: U_co, x2: U_co) -> NDArray[np.bool]: ... +@overload +def not_equal(x1: S_co, x2: S_co) -> NDArray[np.bool]: ... + +@overload +def greater_equal(x1: U_co, x2: U_co) -> NDArray[np.bool]: ... +@overload +def greater_equal(x1: S_co, x2: S_co) -> NDArray[np.bool]: ... + +@overload +def less_equal(x1: U_co, x2: U_co) -> NDArray[np.bool]: ... +@overload +def less_equal(x1: S_co, x2: S_co) -> NDArray[np.bool]: ... + +@overload +def greater(x1: U_co, x2: U_co) -> NDArray[np.bool]: ... +@overload +def greater(x1: S_co, x2: S_co) -> NDArray[np.bool]: ... + +@overload +def less(x1: U_co, x2: U_co) -> NDArray[np.bool]: ... +@overload +def less(x1: S_co, x2: S_co) -> NDArray[np.bool]: ... + +@overload +def add(x1: U_co, x2: U_co) -> NDArray[np.str_]: ... +@overload +def add(x1: S_co, x2: S_co) -> NDArray[np.bytes_]: ... + +@overload +def multiply(a: U_co, i: i_co) -> NDArray[np.str_]: ... +@overload +def multiply(a: S_co, i: i_co) -> NDArray[np.bytes_]: ... + +@overload +def mod(a: U_co, value: Any) -> NDArray[np.str_]: ... +@overload +def mod(a: S_co, value: Any) -> NDArray[np.bytes_]: ... + +def isalpha(x: U_co | S_co) -> NDArray[np.bool]: ... +def isalnum(a: U_co | S_co) -> NDArray[np.bool]: ... +def isdigit(x: U_co | S_co) -> NDArray[np.bool]: ... +def isspace(x: U_co | S_co) -> NDArray[np.bool]: ... +def isdecimal(x: U_co) -> NDArray[np.bool]: ... +def isnumeric(x: U_co) -> NDArray[np.bool]: ... +def islower(a: U_co | S_co) -> NDArray[np.bool]: ... +def istitle(a: U_co | S_co) -> NDArray[np.bool]: ... +def isupper(a: U_co | S_co) -> NDArray[np.bool]: ... + +def str_len(x: U_co | S_co) -> NDArray[np.int_]: ... + +@overload +def find( + a: U_co, + sub: U_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.int_]: ... +@overload +def find( + a: S_co, + sub: S_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.int_]: ... + +@overload +def rfind( + a: U_co, + sub: U_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.int_]: ... +@overload +def rfind( + a: S_co, + sub: S_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.int_]: ... + +@overload +def index( + a: U_co, + sub: U_co, + start: i_co = ..., + end: None | i_co = ..., +) -> NDArray[np.int_]: ... +@overload +def index( + a: S_co, + sub: S_co, + start: i_co = ..., + end: None | i_co = ..., +) -> NDArray[np.int_]: ... + +@overload +def rindex( + a: U_co, + sub: U_co, + start: i_co = ..., + end: None | i_co = ..., +) -> NDArray[np.int_]: ... +@overload +def rindex( + a: S_co, + sub: S_co, + start: i_co = ..., + end: None | i_co = ..., +) -> NDArray[np.int_]: ... + +@overload +def count( + a: U_co, + sub: U_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.int_]: ... +@overload +def count( + a: S_co, + sub: S_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.int_]: ... + +@overload +def startswith( + a: U_co, + prefix: U_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.bool]: ... +@overload +def startswith( + a: S_co, + prefix: S_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.bool]: ... + +@overload +def endswith( + a: U_co, + suffix: U_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.bool]: ... +@overload +def endswith( + a: S_co, + suffix: S_co, + start: i_co = ..., + end: i_co | None = ..., +) -> NDArray[np.bool]: ... + +def decode( + a: S_co, + encoding: None | str = ..., + errors: None | str = ..., +) -> NDArray[np.str_]: ... + +def encode( + a: U_co, + encoding: None | str = ..., + errors: None | str = ..., +) -> NDArray[np.bytes_]: ... + +@overload +def expandtabs(a: U_co, tabsize: i_co = ...) -> NDArray[np.str_]: ... +@overload +def expandtabs(a: S_co, tabsize: i_co = ...) -> NDArray[np.bytes_]: ... + +@overload +def center(a: U_co, width: i_co, fillchar: U_co = ...) -> NDArray[np.str_]: ... +@overload +def center(a: S_co, width: i_co, fillchar: S_co = ...) -> NDArray[np.bytes_]: ... + +@overload +def ljust(a: U_co, width: i_co, fillchar: U_co = ...) -> NDArray[np.str_]: ... +@overload +def ljust(a: S_co, width: i_co, fillchar: S_co = ...) -> NDArray[np.bytes_]: ... + +@overload +def rjust( + a: U_co, + width: i_co, + fillchar: U_co = ..., +) -> NDArray[np.str_]: ... +@overload +def rjust( + a: S_co, + width: i_co, + fillchar: S_co = ..., +) -> NDArray[np.bytes_]: ... + +@overload +def lstrip(a: U_co, chars: None | U_co = ...) -> NDArray[np.str_]: ... +@overload +def lstrip(a: S_co, chars: None | S_co = ...) -> NDArray[np.bytes_]: ... + +@overload +def rstrip(a: U_co, char: None | U_co = ...) -> NDArray[np.str_]: ... +@overload +def rstrip(a: S_co, char: None | S_co = ...) -> NDArray[np.bytes_]: ... + +@overload +def strip(a: U_co, chars: None | U_co = ...) -> NDArray[np.str_]: ... +@overload +def strip(a: S_co, chars: None | S_co = ...) -> NDArray[np.bytes_]: ... + +@overload +def zfill(a: U_co, width: i_co) -> NDArray[np.str_]: ... +@overload +def zfill(a: S_co, width: i_co) -> NDArray[np.bytes_]: ... + +@overload +def upper(a: U_co) -> NDArray[np.str_]: ... +@overload +def upper(a: S_co) -> NDArray[np.bytes_]: ... + +@overload +def lower(a: U_co) -> NDArray[np.str_]: ... +@overload +def lower(a: S_co) -> NDArray[np.bytes_]: ... + +@overload +def swapcase(a: U_co) -> NDArray[np.str_]: ... +@overload +def swapcase(a: S_co) -> NDArray[np.bytes_]: ... + +@overload +def capitalize(a: U_co) -> NDArray[np.str_]: ... +@overload +def capitalize(a: S_co) -> NDArray[np.bytes_]: ... + +@overload +def title(a: U_co) -> NDArray[np.str_]: ... +@overload +def title(a: S_co) -> NDArray[np.bytes_]: ... + +@overload +def replace( + a: U_co, + old: U_co, + new: U_co, + count: i_co = ..., +) -> NDArray[np.str_]: ... +@overload +def replace( + a: S_co, + old: S_co, + new: S_co, + count: i_co = ..., +) -> NDArray[np.bytes_]: ... + +@overload +def join(sep: U_co, seq: U_co) -> NDArray[np.str_]: ... +@overload +def join(sep: S_co, seq: S_co) -> NDArray[np.bytes_]: ... + +@overload +def split( + a: U_co, + sep: None | U_co = ..., + maxsplit: None | i_co = ..., +) -> NDArray[np.object_]: ... +@overload +def split( + a: S_co, + sep: None | S_co = ..., + maxsplit: None | i_co = ..., +) -> NDArray[np.object_]: ... + +@overload +def rsplit( + a: U_co, + sep: None | U_co = ..., + maxsplit: None | i_co = ..., +) -> NDArray[np.object_]: ... +@overload +def rsplit( + a: S_co, + sep: None | S_co = ..., + maxsplit: None | i_co = ..., +) -> NDArray[np.object_]: ... + +@overload +def splitlines(a: U_co, keepends: None | b_co = ...) -> NDArray[np.object_]: ... +@overload +def splitlines(a: S_co, keepends: None | b_co = ...) -> NDArray[np.object_]: ... + +@overload +def partition(a: U_co, sep: U_co) -> NDArray[np.str_]: ... +@overload +def partition(a: S_co, sep: S_co) -> NDArray[np.bytes_]: ... + +@overload +def rpartition(a: U_co, sep: U_co) -> NDArray[np.str_]: ... +@overload +def rpartition(a: S_co, sep: S_co) -> NDArray[np.bytes_]: ... + +@overload +def translate( + a: U_co, + table: U_co, + deletechars: None | U_co = ..., +) -> NDArray[np.str_]: ... +@overload +def translate( + a: S_co, + table: S_co, + deletechars: None | S_co = ..., +) -> NDArray[np.bytes_]: ... diff --git 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decimal point. + + Returns + ------- + old_locale: str + Locale when the function was called. + new_locale: {str, None) + First French locale found, None if none found. + + """ + if sys.platform == 'win32': + locales = ['FRENCH'] + else: + locales = ['fr_FR', 'fr_FR.UTF-8', 'fi_FI', 'fi_FI.UTF-8'] + + old_locale = locale.getlocale(locale.LC_NUMERIC) + new_locale = None + try: + for loc in locales: + try: + locale.setlocale(locale.LC_NUMERIC, loc) + new_locale = loc + break + except locale.Error: + pass + finally: + locale.setlocale(locale.LC_NUMERIC, locale=old_locale) + return old_locale, new_locale + + +class CommaDecimalPointLocale: + """Sets LC_NUMERIC to a locale with comma as decimal point. + + Classes derived from this class have setup and teardown methods that run + tests with locale.LC_NUMERIC set to a locale where commas (',') are used as + the decimal point instead of periods ('.'). On exit the locale is restored + to the initial locale. It also serves as context manager with the same + effect. If no such locale is available, the test is skipped. + + .. versionadded:: 1.15.0 + + """ + (cur_locale, tst_locale) = find_comma_decimal_point_locale() + + def setup_method(self): + if self.tst_locale is None: + pytest.skip("No French locale available") + locale.setlocale(locale.LC_NUMERIC, locale=self.tst_locale) + + def teardown_method(self): + locale.setlocale(locale.LC_NUMERIC, locale=self.cur_locale) + + def __enter__(self): + if self.tst_locale is None: + pytest.skip("No French locale available") + locale.setlocale(locale.LC_NUMERIC, locale=self.tst_locale) + + def __exit__(self, type, value, traceback): + locale.setlocale(locale.LC_NUMERIC, locale=self.cur_locale) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/_natype.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/_natype.py new file mode 100644 index 0000000000000000000000000000000000000000..e529e548cf1ebc066db31431804202e79bfc9d20 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/_natype.py @@ -0,0 +1,198 @@ +# Vendored implementation of pandas.NA, adapted from pandas/_libs/missing.pyx +# +# This is vendored to avoid adding pandas as a test dependency. + +__all__ = ["pd_NA"] + +import numbers + +import numpy as np + +def _create_binary_propagating_op(name, is_divmod=False): + is_cmp = name.strip("_") in ["eq", "ne", "le", "lt", "ge", "gt"] + + def method(self, other): + if ( + other is pd_NA + or isinstance(other, (str, bytes)) + or isinstance(other, (numbers.Number, np.bool)) + or isinstance(other, np.ndarray) + and not other.shape + ): + # Need the other.shape clause to handle NumPy scalars, + # since we do a setitem on `out` below, which + # won't work for NumPy scalars. + if is_divmod: + return pd_NA, pd_NA + else: + return pd_NA + + elif isinstance(other, np.ndarray): + out = np.empty(other.shape, dtype=object) + out[:] = pd_NA + + if is_divmod: + return out, out.copy() + else: + return out + + elif is_cmp and isinstance(other, (np.datetime64, np.timedelta64)): + return pd_NA + + elif isinstance(other, np.datetime64): + if name in ["__sub__", "__rsub__"]: + return pd_NA + + elif isinstance(other, np.timedelta64): + if name in ["__sub__", "__rsub__", "__add__", "__radd__"]: + return pd_NA + + return NotImplemented + + method.__name__ = name + return method + + +def _create_unary_propagating_op(name: str): + def method(self): + return pd_NA + + method.__name__ = name + return method + + +class NAType: + def __repr__(self) -> str: + return "" + + def __format__(self, format_spec) -> str: + try: + return self.__repr__().__format__(format_spec) + except ValueError: + return self.__repr__() + + def __bool__(self): + raise TypeError("boolean value of NA is ambiguous") + + def __hash__(self): + exponent = 31 if is_32bit else 61 + return 2**exponent - 1 + + def __reduce__(self): + return "pd_NA" + + # Binary arithmetic and comparison ops -> propagate + + __add__ = _create_binary_propagating_op("__add__") + __radd__ = _create_binary_propagating_op("__radd__") + __sub__ = _create_binary_propagating_op("__sub__") + __rsub__ = _create_binary_propagating_op("__rsub__") + __mul__ = _create_binary_propagating_op("__mul__") + __rmul__ = _create_binary_propagating_op("__rmul__") + __matmul__ = _create_binary_propagating_op("__matmul__") + __rmatmul__ = _create_binary_propagating_op("__rmatmul__") + __truediv__ = _create_binary_propagating_op("__truediv__") + __rtruediv__ = _create_binary_propagating_op("__rtruediv__") + __floordiv__ = _create_binary_propagating_op("__floordiv__") + __rfloordiv__ = _create_binary_propagating_op("__rfloordiv__") + __mod__ = _create_binary_propagating_op("__mod__") + __rmod__ = _create_binary_propagating_op("__rmod__") + __divmod__ = _create_binary_propagating_op("__divmod__", is_divmod=True) + __rdivmod__ = _create_binary_propagating_op("__rdivmod__", is_divmod=True) + # __lshift__ and __rshift__ are not implemented + + __eq__ = _create_binary_propagating_op("__eq__") + __ne__ = _create_binary_propagating_op("__ne__") + __le__ = _create_binary_propagating_op("__le__") + __lt__ = _create_binary_propagating_op("__lt__") + __gt__ = _create_binary_propagating_op("__gt__") + __ge__ = _create_binary_propagating_op("__ge__") + + # Unary ops + + __neg__ = _create_unary_propagating_op("__neg__") + __pos__ = _create_unary_propagating_op("__pos__") + __abs__ = _create_unary_propagating_op("__abs__") + __invert__ = _create_unary_propagating_op("__invert__") + + # pow has special + def __pow__(self, other): + if other is pd_NA: + return pd_NA + elif isinstance(other, (numbers.Number, np.bool)): + if other == 0: + # returning positive is correct for +/- 0. + return type(other)(1) + else: + return pd_NA + elif util.is_array(other): + return np.where(other == 0, other.dtype.type(1), pd_NA) + + return NotImplemented + + def __rpow__(self, other): + if other is pd_NA: + return pd_NA + elif isinstance(other, (numbers.Number, np.bool)): + if other == 1: + return other + else: + return pd_NA + elif util.is_array(other): + return np.where(other == 1, other, pd_NA) + return NotImplemented + + # Logical ops using Kleene logic + + def __and__(self, other): + if other is False: + return False + elif other is True or other is pd_NA: + return pd_NA + return NotImplemented + + __rand__ = __and__ + + def __or__(self, other): + if other is True: + return True + elif other is False or other is pd_NA: + return pd_NA + return NotImplemented + + __ror__ = __or__ + + def __xor__(self, other): + if other is False or other is True or other is pd_NA: + return pd_NA + return NotImplemented + + __rxor__ = __xor__ + + __array_priority__ = 1000 + _HANDLED_TYPES = (np.ndarray, numbers.Number, str, np.bool) + + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + types = self._HANDLED_TYPES + (NAType,) + for x in inputs: + if not isinstance(x, types): + return NotImplemented + + if method != "__call__": + raise ValueError(f"ufunc method '{method}' not supported for NA") + result = maybe_dispatch_ufunc_to_dunder_op( + self, ufunc, method, *inputs, **kwargs + ) + if result is NotImplemented: + # For a NumPy ufunc that's not a binop, like np.logaddexp + index = [i for i, x in enumerate(inputs) if x is pd_NA][0] + result = np.broadcast_arrays(*inputs)[index] + if result.ndim == 0: + result = result.item() + if ufunc.nout > 1: + result = (pd_NA,) * ufunc.nout + + return result + + +pd_NA = NAType() diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/data/astype_copy.pkl b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/astype_copy.pkl new file mode 100644 index 0000000000000000000000000000000000000000..45694ae001c4a103365ff9fd5ae2da0dba3c11f6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/astype_copy.pkl @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9564b309cbf3441ff0a6e4468fddaca46230fab34f15c77d87025a455bdf59d9 +size 716 diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/data/generate_umath_validation_data.cpp b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/generate_umath_validation_data.cpp new file mode 100644 index 0000000000000000000000000000000000000000..88ff45e161f8a37dd8aa9ee9f624db07eb42e743 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/generate_umath_validation_data.cpp @@ -0,0 +1,170 @@ +#include +#include +#include +#include +#include +#include +#include +#include + +struct ufunc { + std::string name; + double (*f32func)(double); + long double (*f64func)(long double); + float f32ulp; + float f64ulp; +}; + +template +T +RandomFloat(T a, T b) +{ + T random = ((T)rand()) / (T)RAND_MAX; + T diff = b - a; + T r = random * diff; + return a + r; +} + +template +void +append_random_array(std::vector &arr, T min, T max, size_t N) +{ + for (size_t ii = 0; ii < N; ++ii) + arr.emplace_back(RandomFloat(min, max)); +} + +template +std::vector +computeTrueVal(const std::vector &in, T2 (*mathfunc)(T2)) +{ + std::vector out; + for (T1 elem : in) { + T2 elem_d = (T2)elem; + T1 out_elem = (T1)mathfunc(elem_d); + out.emplace_back(out_elem); + } + return out; +} + +/* + * FP range: + * [-inf, -maxflt, -1., -minflt, -minden, 0., minden, minflt, 1., maxflt, inf] + */ + +#define MINDEN std::numeric_limits::denorm_min() +#define MINFLT std::numeric_limits::min() +#define MAXFLT std::numeric_limits::max() +#define INF std::numeric_limits::infinity() +#define qNAN std::numeric_limits::quiet_NaN() +#define sNAN std::numeric_limits::signaling_NaN() + +template +std::vector +generate_input_vector(std::string func) +{ + std::vector input = {MINDEN, -MINDEN, MINFLT, -MINFLT, MAXFLT, + -MAXFLT, INF, -INF, qNAN, sNAN, + -1.0, 1.0, 0.0, -0.0}; + + // [-1.0, 1.0] + if ((func == "arcsin") || (func == "arccos") || (func == "arctanh")) { + append_random_array(input, -1.0, 1.0, 700); + } + // (0.0, INF] + else if ((func == "log2") || (func == "log10")) { + append_random_array(input, 0.0, 1.0, 200); + append_random_array(input, MINDEN, MINFLT, 200); + append_random_array(input, MINFLT, 1.0, 200); + append_random_array(input, 1.0, MAXFLT, 200); + } + // (-1.0, INF] + else if (func == "log1p") { + append_random_array(input, -1.0, 1.0, 200); + append_random_array(input, -MINFLT, -MINDEN, 100); + append_random_array(input, -1.0, -MINFLT, 100); + append_random_array(input, MINDEN, MINFLT, 100); + append_random_array(input, MINFLT, 1.0, 100); + append_random_array(input, 1.0, MAXFLT, 100); + } + // [1.0, INF] + else if (func == "arccosh") { + append_random_array(input, 1.0, 2.0, 400); + append_random_array(input, 2.0, MAXFLT, 300); + } + // [-INF, INF] + else { + append_random_array(input, -1.0, 1.0, 100); + append_random_array(input, MINDEN, MINFLT, 100); + append_random_array(input, -MINFLT, -MINDEN, 100); + append_random_array(input, MINFLT, 1.0, 100); + append_random_array(input, -1.0, -MINFLT, 100); + append_random_array(input, 1.0, MAXFLT, 100); + append_random_array(input, -MAXFLT, -100.0, 100); + } + + std::random_shuffle(input.begin(), input.end()); + return input; +} + +int +main() +{ + srand(42); + std::vector umathfunc = { + {"sin", sin, sin, 1.49, 1.00}, + {"cos", cos, cos, 1.49, 1.00}, + {"tan", tan, tan, 3.91, 1.00}, + {"arcsin", asin, asin, 3.12, 1.00}, + {"arccos", acos, acos, 2.1, 1.00}, + {"arctan", atan, atan, 2.3, 1.00}, + {"sinh", sinh, sinh, 1.55, 1.00}, + {"cosh", cosh, cosh, 2.48, 1.00}, + {"tanh", tanh, tanh, 1.38, 2.00}, + {"arcsinh", asinh, asinh, 1.01, 1.00}, + {"arccosh", acosh, acosh, 1.16, 1.00}, + {"arctanh", atanh, atanh, 1.45, 1.00}, + {"cbrt", cbrt, cbrt, 1.94, 2.00}, + //{"exp",exp,exp,3.76,1.00}, + {"exp2", exp2, exp2, 1.01, 1.00}, + {"expm1", expm1, expm1, 2.62, 1.00}, + //{"log",log,log,1.84,1.00}, + {"log10", log10, log10, 3.5, 1.00}, + {"log1p", log1p, log1p, 1.96, 1.0}, + {"log2", log2, log2, 2.12, 1.00}, + }; + + for (int ii = 0; ii < umathfunc.size(); ++ii) { + // ignore sin/cos + if ((umathfunc[ii].name != "sin") && (umathfunc[ii].name != "cos")) { + std::string fileName = + "umath-validation-set-" + umathfunc[ii].name + ".csv"; + std::ofstream txtOut; + txtOut.open(fileName, std::ofstream::trunc); + txtOut << "dtype,input,output,ulperrortol" << std::endl; + + // Single Precision + auto f32in = generate_input_vector(umathfunc[ii].name); + auto f32out = computeTrueVal(f32in, + umathfunc[ii].f32func); + for (int jj = 0; jj < f32in.size(); ++jj) { + txtOut << "np.float32" << std::hex << ",0x" + << *reinterpret_cast(&f32in[jj]) << ",0x" + << *reinterpret_cast(&f32out[jj]) << "," + << ceil(umathfunc[ii].f32ulp) << std::endl; + } + + // Double Precision + auto f64in = generate_input_vector(umathfunc[ii].name); + auto f64out = computeTrueVal( + f64in, umathfunc[ii].f64func); + for (int jj = 0; jj < f64in.size(); ++jj) { + txtOut << "np.float64" << std::hex << ",0x" + << *reinterpret_cast(&f64in[jj]) << ",0x" + << *reinterpret_cast(&f64out[jj]) << "," + << ceil(umathfunc[ii].f64ulp) << std::endl; + } + txtOut.close(); + } + } + return 0; +} diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/data/recarray_from_file.fits b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/recarray_from_file.fits new file mode 100644 index 0000000000000000000000000000000000000000..ca48ee85153645a7510e201d574e9b119c089dce Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/recarray_from_file.fits differ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-README.txt b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-README.txt new file mode 100644 index 0000000000000000000000000000000000000000..cfc9e4145d10276a4d296f3e189debeb581db780 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-README.txt @@ -0,0 +1,15 @@ +Steps to validate transcendental functions: +1) Add a file 'umath-validation-set-.txt', where ufuncname is name of + the function in NumPy you want to validate +2) The file should contain 4 columns: dtype,input,expected output,ulperror + a. dtype: one of np.float16, np.float32, np.float64 + b. input: floating point input to ufunc in hex. Example: 0x414570a4 + represents 12.340000152587890625 + c. expected output: floating point output for the corresponding input in hex. + This should be computed using a high(er) precision library and then rounded to + same format as the input. + d. ulperror: expected maximum ulp error of the function. This + should be same across all rows of the same dtype. Otherwise, the function is + tested for the maximum ulp error among all entries of that dtype. +3) Add file umath-validation-set-.txt to the test file test_umath_accuracy.py + which will then validate your ufunc. diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-arccos.csv b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-arccos.csv new file mode 100644 index 0000000000000000000000000000000000000000..82c8595cb4a617eb779c18b3e086d8ceb8d231e0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-arccos.csv @@ -0,0 +1,1429 @@ +dtype,input,output,ulperrortol +np.float32,0xbddd7f50,0x3fd6eec2,3 +np.float32,0xbe32a20c,0x3fdf8182,3 +np.float32,0xbf607c09,0x4028f84f,3 +np.float32,0x3f25d906,0x3f5db544,3 +np.float32,0x3f01cec8,0x3f84febf,3 +np.float32,0x3f1d5c6e,0x3f68a735,3 +np.float32,0xbf0cab89,0x4009c36d,3 +np.float32,0xbf176b40,0x400d0941,3 +np.float32,0x3f3248b2,0x3f4ce6d4,3 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0000000000000000000000000000000000000000..258ae48ce0209f6873101426fce439c233078c89 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-cos.csv @@ -0,0 +1,1375 @@ +dtype,input,output,ulperrortol +## +ve denormals ## +np.float32,0x004b4716,0x3f800000,2 +np.float32,0x007b2490,0x3f800000,2 +np.float32,0x007c99fa,0x3f800000,2 +np.float32,0x00734a0c,0x3f800000,2 +np.float32,0x0070de24,0x3f800000,2 +np.float32,0x007fffff,0x3f800000,2 +np.float32,0x00000001,0x3f800000,2 +## -ve denormals ## +np.float32,0x80495d65,0x3f800000,2 +np.float32,0x806894f6,0x3f800000,2 +np.float32,0x80555a76,0x3f800000,2 +np.float32,0x804e1fb8,0x3f800000,2 +np.float32,0x80687de9,0x3f800000,2 +np.float32,0x807fffff,0x3f800000,2 +np.float32,0x80000001,0x3f800000,2 +## +/-0.0f, +/-FLT_MIN +/-FLT_MAX ## +np.float32,0x00000000,0x3f800000,2 +np.float32,0x80000000,0x3f800000,2 +np.float32,0x00800000,0x3f800000,2 +np.float32,0x80800000,0x3f800000,2 +## 1.00f + 0x00000001 ## 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+np.float64,0x80005d348e80ba6a,0x3ff0000000000000,1 +np.float64,0x800c348d6118691b,0x3ff0000000000000,1 +np.float64,0xffd6b88f84ad7120,0x7ff0000000000000,1 +np.float64,0x3fc1aaaa82235555,0x3ff027136afd08e0,1 +np.float64,0x7fca7d081b34fa0f,0x7ff0000000000000,1 +np.float64,0x1,0x3ff0000000000000,1 +np.float64,0xbfdc810d1139021a,0x3ff19d007408cfe3,1 +np.float64,0xbfe5dce05f2bb9c0,0x3ff3e1bb9234617b,1 +np.float64,0xffecfe2c32b9fc58,0x7ff0000000000000,1 +np.float64,0x95b2891b2b651,0x3ff0000000000000,1 +np.float64,0x8000b60c6c616c1a,0x3ff0000000000000,1 +np.float64,0x4944f0889289f,0x3ff0000000000000,1 +np.float64,0x3fe6e508696dca10,0x3ff445d1b94863e9,1 +np.float64,0xbfe63355d0ec66ac,0x3ff401e74f16d16f,1 +np.float64,0xbfe9b9595af372b3,0x3ff57445e1b4d670,1 +np.float64,0x800e16f7313c2dee,0x3ff0000000000000,1 +np.float64,0xffe898f5f0b131eb,0x7ff0000000000000,1 +np.float64,0x3fe91ac651f2358d,0x3ff52e787c21c004,1 +np.float64,0x7fbfaac6783f558c,0x7ff0000000000000,1 +np.float64,0xd8ef3dfbb1de8,0x3ff0000000000000,1 +np.float64,0xbfc58c13a52b1828,0x3ff03a2c19d65019,1 +np.float64,0xbfbde55e8a3bcac0,0x3ff01bf648a3e0a7,1 +np.float64,0xffc3034930260694,0x7ff0000000000000,1 +np.float64,0xea77a64dd4ef5,0x3ff0000000000000,1 +np.float64,0x800cfe7e7739fcfd,0x3ff0000000000000,1 +np.float64,0x4960f31a92c1f,0x3ff0000000000000,1 +np.float64,0x3fd9552c94b2aa58,0x3ff14515a29add09,1 +np.float64,0xffe8b3244c316648,0x7ff0000000000000,1 +np.float64,0x3fe8201e6a70403d,0x3ff4c444fa679cce,1 +np.float64,0xffe9ab7c20f356f8,0x7ff0000000000000,1 +np.float64,0x3fed8bba5f7b1774,0x3ff751853c4c95c5,1 +np.float64,0x8007639cb76ec73a,0x3ff0000000000000,1 +np.float64,0xbfe396db89672db7,0x3ff317bfd1d6fa8c,1 +np.float64,0xbfeb42f888f685f1,0x3ff62a7e0eee56b1,1 +np.float64,0x3fe894827c712904,0x3ff4f4f561d9ea13,1 +np.float64,0xb66b3caf6cd68,0x3ff0000000000000,1 +np.float64,0x800f8907fdbf1210,0x3ff0000000000000,1 +np.float64,0x7fe9b0cddb73619b,0x7ff0000000000000,1 +np.float64,0xbfda70c0e634e182,0x3ff1628c6fdffc53,1 +np.float64,0x3fe0b5f534a16bea,0x3ff23b4ed4c2b48e,1 +np.float64,0xbfe8eee93671ddd2,0x3ff51b85b3c50ae4,1 +np.float64,0xbfe8c22627f1844c,0x3ff50858787a3bfe,1 +np.float64,0x37bb83c86f771,0x3ff0000000000000,1 +np.float64,0xffb7827ffe2f0500,0x7ff0000000000000,1 +np.float64,0x64317940c864,0x3ff0000000000000,1 +np.float64,0x800430ecee6861db,0x3ff0000000000000,1 +np.float64,0x3fa4291fbc285240,0x3ff0032d0204f6dd,1 +np.float64,0xffec69f76af8d3ee,0x7ff0000000000000,1 +np.float64,0x3ff0000000000000,0x3ff8b07551d9f550,1 +np.float64,0x3fc4cf3c42299e79,0x3ff0363fb1d3c254,1 +np.float64,0x7fe0223a77e04474,0x7ff0000000000000,1 +np.float64,0x800a3d4fa4347aa0,0x3ff0000000000000,1 +np.float64,0x3fdd273f94ba4e7f,0x3ff1b05b686e6879,1 +np.float64,0x3feca79052f94f20,0x3ff6dadedfa283aa,1 +np.float64,0x5e7f6f80bcfef,0x3ff0000000000000,1 +np.float64,0xbfef035892fe06b1,0x3ff81efb39cbeba2,1 +np.float64,0x3fee6c08e07cd812,0x3ff7caad952860a1,1 +np.float64,0xffeda715877b4e2a,0x7ff0000000000000,1 +np.float64,0x800580286b0b0052,0x3ff0000000000000,1 +np.float64,0x800703a73fee074f,0x3ff0000000000000,1 +np.float64,0xbfccf96a6639f2d4,0x3ff0696330a60832,1 +np.float64,0x7feb408442368108,0x7ff0000000000000,1 +np.float64,0x3fedc87a46fb90f5,0x3ff771e3635649a9,1 +np.float64,0x3fd8297b773052f7,0x3ff12762bc0cea76,1 +np.float64,0x3fee41bb03fc8376,0x3ff7b37b2da48ab4,1 +np.float64,0xbfe2b05a226560b4,0x3ff2cea17ae7c528,1 +np.float64,0xbfd2e92cf2a5d25a,0x3ff0b41d605ced61,1 +np.float64,0x4817f03a902ff,0x3ff0000000000000,1 +np.float64,0x8c9d4f0d193aa,0x3ff0000000000000,1 diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-exp.csv b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-exp.csv new file mode 100644 index 0000000000000000000000000000000000000000..7c5ef3b334fbd8a63bb1a0e6ad72577f767dbaf6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-exp.csv @@ -0,0 +1,412 @@ +dtype,input,output,ulperrortol +## +ve denormals ## +np.float32,0x004b4716,0x3f800000,3 +np.float32,0x007b2490,0x3f800000,3 +np.float32,0x007c99fa,0x3f800000,3 +np.float32,0x00734a0c,0x3f800000,3 +np.float32,0x0070de24,0x3f800000,3 +np.float32,0x00495d65,0x3f800000,3 +np.float32,0x006894f6,0x3f800000,3 +np.float32,0x00555a76,0x3f800000,3 +np.float32,0x004e1fb8,0x3f800000,3 +np.float32,0x00687de9,0x3f800000,3 +## -ve denormals ## +np.float32,0x805b59af,0x3f800000,3 +np.float32,0x807ed8ed,0x3f800000,3 +np.float32,0x807142ad,0x3f800000,3 +np.float32,0x80772002,0x3f800000,3 +np.float32,0x8062abcb,0x3f800000,3 +np.float32,0x8045e31c,0x3f800000,3 +np.float32,0x805f01c2,0x3f800000,3 +np.float32,0x80506432,0x3f800000,3 +np.float32,0x8060089d,0x3f800000,3 +np.float32,0x8071292f,0x3f800000,3 +## floats that output a denormal ## +np.float32,0xc2cf3fc1,0x00000001,3 +np.float32,0xc2c79726,0x00000021,3 +np.float32,0xc2cb295d,0x00000005,3 +np.float32,0xc2b49e6b,0x00068c4c,3 +np.float32,0xc2ca8116,0x00000008,3 +np.float32,0xc2c23f82,0x000001d7,3 +np.float32,0xc2cb69c0,0x00000005,3 +np.float32,0xc2cc1f4d,0x00000003,3 +np.float32,0xc2ae094e,0x00affc4c,3 +np.float32,0xc2c86c44,0x00000015,3 +## random floats between -87.0f and 88.0f ## +np.float32,0x4030d7e0,0x417d9a05,3 +np.float32,0x426f60e8,0x6aa1be2c,3 +np.float32,0x41a1b220,0x4e0efc11,3 +np.float32,0xc20cc722,0x26159da7,3 +np.float32,0x41c492bc,0x512ec79d,3 +np.float32,0x40980210,0x42e73a0e,3 +np.float32,0xbf1f7b80,0x3f094de3,3 +np.float32,0x42a678a4,0x7b87a383,3 +np.float32,0xc20f3cfd,0x25a1c304,3 +np.float32,0x423ff34c,0x6216467f,3 +np.float32,0x00000000,0x3f800000,3 +## floats that cause an overflow ## +np.float32,0x7f06d8c1,0x7f800000,3 +np.float32,0x7f451912,0x7f800000,3 +np.float32,0x7ecceac3,0x7f800000,3 +np.float32,0x7f643b45,0x7f800000,3 +np.float32,0x7e910ea0,0x7f800000,3 +np.float32,0x7eb4756b,0x7f800000,3 +np.float32,0x7f4ec708,0x7f800000,3 +np.float32,0x7f6b4551,0x7f800000,3 +np.float32,0x7d8edbda,0x7f800000,3 +np.float32,0x7f730718,0x7f800000,3 +np.float32,0x42b17217,0x7f7fff84,3 +np.float32,0x42b17218,0x7f800000,3 +np.float32,0x42b17219,0x7f800000,3 +np.float32,0xfef2b0bc,0x00000000,3 +np.float32,0xff69f83e,0x00000000,3 +np.float32,0xff4ecb12,0x00000000,3 +np.float32,0xfeac6d86,0x00000000,3 +np.float32,0xfde0cdb8,0x00000000,3 +np.float32,0xff26aef4,0x00000000,3 +np.float32,0xff6f9277,0x00000000,3 +np.float32,0xff7adfc4,0x00000000,3 +np.float32,0xff0ad40e,0x00000000,3 +np.float32,0xff6fd8f3,0x00000000,3 +np.float32,0xc2cff1b4,0x00000001,3 +np.float32,0xc2cff1b5,0x00000000,3 +np.float32,0xc2cff1b6,0x00000000,3 +np.float32,0x7f800000,0x7f800000,3 +np.float32,0xff800000,0x00000000,3 +np.float32,0x4292f27c,0x7480000a,3 +np.float32,0x42a920be,0x7c7fff94,3 +np.float32,0x41c214c9,0x50ffffd9,3 +np.float32,0x41abe686,0x4effffd9,3 +np.float32,0x4287db5a,0x707fffd3,3 +np.float32,0x41902cbb,0x4c800078,3 +np.float32,0x42609466,0x67ffffeb,3 +np.float32,0x41a65af5,0x4e7fffd1,3 +np.float32,0x417f13ff,0x4affffc9,3 +np.float32,0x426d0e6c,0x6a3504f2,3 +np.float32,0x41bc8934,0x507fff51,3 +np.float32,0x42a7bdde,0x7c0000d6,3 +np.float32,0x4120cf66,0x46b504f6,3 +np.float32,0x4244da8f,0x62ffff1a,3 +np.float32,0x41a0cf69,0x4e000034,3 +np.float32,0x41cd2bec,0x52000005,3 +np.float32,0x42893e41,0x7100009e,3 +np.float32,0x41b437e1,0x4fb50502,3 +np.float32,0x41d8430f,0x5300001d,3 +np.float32,0x4244da92,0x62ffffda,3 +np.float32,0x41a0cf63,0x4dffffa9,3 +np.float32,0x3eb17218,0x3fb504f3,3 +np.float32,0x428729e8,0x703504dc,3 +np.float32,0x41a0cf67,0x4e000014,3 +np.float32,0x4252b77d,0x65800011,3 +np.float32,0x41902cb9,0x4c800058,3 +np.float32,0x42a0cf67,0x79800052,3 +np.float32,0x4152b77b,0x48ffffe9,3 +np.float32,0x41265af3,0x46ffffc8,3 +np.float32,0x42187e0b,0x5affff9a,3 +np.float32,0xc0d2b77c,0x3ab504f6,3 +np.float32,0xc283b2ac,0x10000072,3 +np.float32,0xc1cff1b4,0x2cb504f5,3 +np.float32,0xc05dce9e,0x3d000000,3 +np.float32,0xc28ec9d2,0x0bfffea5,3 +np.float32,0xc23c893a,0x1d7fffde,3 +np.float32,0xc2a920c0,0x027fff6c,3 +np.float32,0xc1f9886f,0x2900002b,3 +np.float32,0xc2c42920,0x000000b5,3 +np.float32,0xc2893e41,0x0dfffec5,3 +np.float32,0xc2c4da93,0x00000080,3 +np.float32,0xc17f1401,0x3400000c,3 +np.float32,0xc1902cb6,0x327fffaf,3 +np.float32,0xc27c4e3b,0x11ffffc5,3 +np.float32,0xc268e5c5,0x157ffe9d,3 +np.float32,0xc2b4e953,0x0005a826,3 +np.float32,0xc287db5a,0x0e800016,3 +np.float32,0xc207db5a,0x2700000b,3 +np.float32,0xc2b2d4fe,0x000ffff1,3 +np.float32,0xc268e5c0,0x157fffdd,3 +np.float32,0xc22920bd,0x2100003b,3 +np.float32,0xc2902caf,0x0b80011e,3 +np.float32,0xc1902cba,0x327fff2f,3 +np.float32,0xc2ca6625,0x00000008,3 +np.float32,0xc280ece8,0x10fffeb5,3 +np.float32,0xc2918f94,0x0b0000ea,3 +np.float32,0xc29b43d5,0x077ffffc,3 +np.float32,0xc1e61ff7,0x2ab504f5,3 +np.float32,0xc2867878,0x0effff15,3 +np.float32,0xc2a2324a,0x04fffff4,3 +#float64 +## near zero ## +np.float64,0x8000000000000000,0x3ff0000000000000,1 +np.float64,0x8010000000000000,0x3ff0000000000000,1 +np.float64,0x8000000000000001,0x3ff0000000000000,1 +np.float64,0x8360000000000000,0x3ff0000000000000,1 +np.float64,0x9a70000000000000,0x3ff0000000000000,1 +np.float64,0xb9b0000000000000,0x3ff0000000000000,1 +np.float64,0xb810000000000000,0x3ff0000000000000,1 +np.float64,0xbc30000000000000,0x3ff0000000000000,1 +np.float64,0xb6a0000000000000,0x3ff0000000000000,1 +np.float64,0x0000000000000000,0x3ff0000000000000,1 +np.float64,0x0010000000000000,0x3ff0000000000000,1 +np.float64,0x0000000000000001,0x3ff0000000000000,1 +np.float64,0x0360000000000000,0x3ff0000000000000,1 +np.float64,0x1a70000000000000,0x3ff0000000000000,1 +np.float64,0x3c30000000000000,0x3ff0000000000000,1 +np.float64,0x36a0000000000000,0x3ff0000000000000,1 +np.float64,0x39b0000000000000,0x3ff0000000000000,1 +np.float64,0x3810000000000000,0x3ff0000000000000,1 +## underflow ## +np.float64,0xc0c6276800000000,0x0000000000000000,1 +np.float64,0xc0c62d918ce2421d,0x0000000000000000,1 +np.float64,0xc0c62d918ce2421e,0x0000000000000000,1 +np.float64,0xc0c62d91a0000000,0x0000000000000000,1 +np.float64,0xc0c62d9180000000,0x0000000000000000,1 +np.float64,0xc0c62dea45ee3e06,0x0000000000000000,1 +np.float64,0xc0c62dea45ee3e07,0x0000000000000000,1 +np.float64,0xc0c62dea40000000,0x0000000000000000,1 +np.float64,0xc0c62dea60000000,0x0000000000000000,1 +np.float64,0xc0875f1120000000,0x0000000000000000,1 +np.float64,0xc0875f113c30b1c8,0x0000000000000000,1 +np.float64,0xc0875f1140000000,0x0000000000000000,1 +np.float64,0xc093480000000000,0x0000000000000000,1 +np.float64,0xffefffffffffffff,0x0000000000000000,1 +np.float64,0xc7efffffe0000000,0x0000000000000000,1 +## overflow ## +np.float64,0x40862e52fefa39ef,0x7ff0000000000000,1 +np.float64,0x40872e42fefa39ef,0x7ff0000000000000,1 +## +/- INF, +/- NAN ## +np.float64,0x7ff0000000000000,0x7ff0000000000000,1 +np.float64,0xfff0000000000000,0x0000000000000000,1 +np.float64,0x7ff8000000000000,0x7ff8000000000000,1 +np.float64,0xfff8000000000000,0xfff8000000000000,1 +## output denormal ## +np.float64,0xc087438520000000,0x0000000000000001,1 +np.float64,0xc08743853f2f4461,0x0000000000000001,1 +np.float64,0xc08743853f2f4460,0x0000000000000001,1 +np.float64,0xc087438540000000,0x0000000000000001,1 +## between -745.13321910 and 709.78271289 ## +np.float64,0xbff760cd14774bd9,0x3fcdb14ced00ceb6,1 +np.float64,0xbff760cd20000000,0x3fcdb14cd7993879,1 +np.float64,0xbff760cd00000000,0x3fcdb14d12fbd264,1 +np.float64,0xc07f1cf360000000,0x130c1b369af14fda,1 +np.float64,0xbeb0000000000000,0x3feffffe00001000,1 +np.float64,0xbd70000000000000,0x3fefffffffffe000,1 +np.float64,0xc084fd46e5c84952,0x0360000000000139,1 +np.float64,0xc084fd46e5c84953,0x035ffffffffffe71,1 +np.float64,0xc084fd46e0000000,0x0360000b9096d32c,1 +np.float64,0xc084fd4700000000,0x035fff9721d12104,1 +np.float64,0xc086232bc0000000,0x0010003af5e64635,1 +np.float64,0xc086232bdd7abcd2,0x001000000000007c,1 +np.float64,0xc086232bdd7abcd3,0x000ffffffffffe7c,1 +np.float64,0xc086232be0000000,0x000ffffaf57a6fc9,1 +np.float64,0xc086233920000000,0x000fe590e3b45eb0,1 +np.float64,0xc086233938000000,0x000fe56133493c57,1 +np.float64,0xc086233940000000,0x000fe5514deffbbc,1 +np.float64,0xc086234c98000000,0x000fbf1024c32ccb,1 +np.float64,0xc086234ca0000000,0x000fbf0065bae78d,1 +np.float64,0xc086234c80000000,0x000fbf3f623a7724,1 +np.float64,0xc086234ec0000000,0x000fbad237c846f9,1 +np.float64,0xc086234ec8000000,0x000fbac27cfdec97,1 +np.float64,0xc086234ee0000000,0x000fba934cfd3dc2,1 +np.float64,0xc086234ef0000000,0x000fba73d7f618d9,1 +np.float64,0xc086234f00000000,0x000fba54632dddc0,1 +np.float64,0xc0862356e0000000,0x000faae0945b761a,1 +np.float64,0xc0862356f0000000,0x000faac13eb9a310,1 +np.float64,0xc086235700000000,0x000faaa1e9567b0a,1 +np.float64,0xc086236020000000,0x000f98cd75c11ed7,1 +np.float64,0xc086236ca0000000,0x000f8081b4d93f89,1 +np.float64,0xc086236cb0000000,0x000f8062b3f4d6c5,1 +np.float64,0xc086236cc0000000,0x000f8043b34e6f8c,1 +np.float64,0xc086238d98000000,0x000f41220d9b0d2c,1 +np.float64,0xc086238da0000000,0x000f4112cc80a01f,1 +np.float64,0xc086238d80000000,0x000f414fd145db5b,1 +np.float64,0xc08624fd00000000,0x000cbfce8ea1e6c4,1 +np.float64,0xc086256080000000,0x000c250747fcd46e,1 +np.float64,0xc08626c480000000,0x000a34f4bd975193,1 +np.float64,0xbf50000000000000,0x3feff800ffeaac00,1 +np.float64,0xbe10000000000000,0x3fefffffff800000,1 +np.float64,0xbcd0000000000000,0x3feffffffffffff8,1 +np.float64,0xc055d589e0000000,0x38100004bf94f63e,1 +np.float64,0xc055d58a00000000,0x380ffff97f292ce8,1 +np.float64,0xbfd962d900000000,0x3fe585a4b00110e1,1 +np.float64,0x3ff4bed280000000,0x400d411e7a58a303,1 +np.float64,0x3fff0b3620000000,0x401bd7737ffffcf3,1 +np.float64,0x3ff0000000000000,0x4005bf0a8b145769,1 +np.float64,0x3eb0000000000000,0x3ff0000100000800,1 +np.float64,0x3d70000000000000,0x3ff0000000001000,1 +np.float64,0x40862e42e0000000,0x7fefff841808287f,1 +np.float64,0x40862e42fefa39ef,0x7fefffffffffff2a,1 +np.float64,0x40862e0000000000,0x7feef85a11e73f2d,1 +np.float64,0x4000000000000000,0x401d8e64b8d4ddae,1 +np.float64,0x4009242920000000,0x40372a52c383a488,1 +np.float64,0x4049000000000000,0x44719103e4080b45,1 +np.float64,0x4008000000000000,0x403415e5bf6fb106,1 +np.float64,0x3f50000000000000,0x3ff00400800aab55,1 +np.float64,0x3e10000000000000,0x3ff0000000400000,1 +np.float64,0x3cd0000000000000,0x3ff0000000000004,1 +np.float64,0x40562e40a0000000,0x47effed088821c3f,1 +np.float64,0x40562e42e0000000,0x47effff082e6c7ff,1 +np.float64,0x40562e4300000000,0x47f00000417184b8,1 +np.float64,0x3fe8000000000000,0x4000ef9db467dcf8,1 +np.float64,0x402b12e8d4f33589,0x412718f68c71a6fe,1 +np.float64,0x402b12e8d4f3358a,0x412718f68c71a70a,1 +np.float64,0x402b12e8c0000000,0x412718f59a7f472e,1 +np.float64,0x402b12e8e0000000,0x412718f70c0eac62,1 +##use 1th entry +np.float64,0x40631659AE147CB4,0x4db3a95025a4890f,1 +np.float64,0xC061B87D2E85A4E2,0x332640c8e2de2c51,1 +np.float64,0x405A4A50BE243AF4,0x496a45e4b7f0339a,1 +np.float64,0xC0839898B98EC5C6,0x0764027828830df4,1 +#use 2th entry +np.float64,0xC072428C44B6537C,0x2596ade838b96f3e,1 +np.float64,0xC053057C5E1AE9BF,0x3912c8fad18fdadf,1 +np.float64,0x407E89C78328BAA3,0x6bfe35d5b9a1a194,1 +np.float64,0x4083501B6DD87112,0x77a855503a38924e,1 +#use 3th entry +np.float64,0x40832C6195F24540,0x7741e73c80e5eb2f,1 +np.float64,0xC083D4CD557C2EC9,0x06b61727c2d2508e,1 +np.float64,0x400C48F5F67C99BD,0x404128820f02b92e,1 +np.float64,0x4056E36D9B2DF26A,0x4830f52ff34a8242,1 +#use 4th entry +np.float64,0x4080FF700D8CBD06,0x70fa70df9bc30f20,1 +np.float64,0x406C276D39E53328,0x543eb8e20a8f4741,1 +np.float64,0xC070D6159BBD8716,0x27a4a0548c904a75,1 +np.float64,0xC052EBCF8ED61F83,0x391c0e92368d15e4,1 +#use 5th entry +np.float64,0xC061F892A8AC5FBE,0x32f807a89efd3869,1 +np.float64,0x4021D885D2DBA085,0x40bd4dc86d3e3270,1 +np.float64,0x40767AEEEE7D4FCF,0x605e22851ee2afb7,1 +np.float64,0xC0757C5D75D08C80,0x20f0751599b992a2,1 +#use 6th entry +np.float64,0x405ACF7A284C4CE3,0x499a4e0b7a27027c,1 +np.float64,0xC085A6C9E80D7AF5,0x0175914009d62ec2,1 +np.float64,0xC07E4C02F86F1DAE,0x1439269b29a9231e,1 +np.float64,0x4080D80F9691CC87,0x7088a6cdafb041de,1 +#use 7th entry +np.float64,0x407FDFD84FBA0AC1,0x6deb1ae6f9bc4767,1 +np.float64,0x40630C06A1A2213D,0x4dac7a9d51a838b7,1 +np.float64,0x40685FDB30BB8B4F,0x5183f5cc2cac9e79,1 +np.float64,0x408045A2208F77F4,0x6ee299e08e2aa2f0,1 +#use 8th entry +np.float64,0xC08104E391F5078B,0x0ed397b7cbfbd230,1 +np.float64,0xC031501CAEFAE395,0x3e6040fd1ea35085,1 +np.float64,0xC079229124F6247C,0x1babf4f923306b1e,1 +np.float64,0x407FB65F44600435,0x6db03beaf2512b8a,1 +#use 9th entry +np.float64,0xC07EDEE8E8E8A5AC,0x136536cec9cbef48,1 +np.float64,0x4072BB4086099A14,0x5af4d3c3008b56cc,1 +np.float64,0x4050442A2EC42CB4,0x45cd393bd8fad357,1 +np.float64,0xC06AC28FB3D419B4,0x2ca1b9d3437df85f,1 +#use 10th entry +np.float64,0x40567FC6F0A68076,0x480c977fd5f3122e,1 +np.float64,0x40620A2F7EDA59BB,0x4cf278e96f4ce4d7,1 +np.float64,0xC085044707CD557C,0x034aad6c968a045a,1 +np.float64,0xC07374EA5AC516AA,0x23dd6afdc03e83d5,1 +#use 11th entry +np.float64,0x4073CC95332619C1,0x5c804b1498bbaa54,1 +np.float64,0xC0799FEBBE257F31,0x1af6a954c43b87d2,1 +np.float64,0x408159F19EA424F6,0x7200858efcbfc84d,1 +np.float64,0x404A81F6F24C0792,0x44b664a07ce5bbfa,1 +#use 12th entry +np.float64,0x40295FF1EFB9A741,0x4113c0e74c52d7b0,1 +np.float64,0x4073975F4CC411DA,0x5c32be40b4fec2c1,1 +np.float64,0x406E9DE52E82A77E,0x56049c9a3f1ae089,1 +np.float64,0x40748C2F52560ED9,0x5d93bc14fd4cd23b,1 +#use 13th entry +np.float64,0x4062A553CDC4D04C,0x4d6266bfde301318,1 +np.float64,0xC079EC1D63598AB7,0x1a88cb184dab224c,1 +np.float64,0xC0725C1CB3167427,0x25725b46f8a081f6,1 +np.float64,0x407888771D9B45F9,0x6353b1ec6bd7ce80,1 +#use 14th entry +np.float64,0xC082CBA03AA89807,0x09b383723831ce56,1 +np.float64,0xC083A8961BB67DD7,0x0735b118d5275552,1 +np.float64,0xC076BC6ECA12E7E3,0x1f2222679eaef615,1 +np.float64,0xC072752503AA1A5B,0x254eb832242c77e1,1 +#use 15th entry +np.float64,0xC058800792125DEC,0x371882372a0b48d4,1 +np.float64,0x4082909FD863E81C,0x7580d5f386920142,1 +np.float64,0xC071616F8FB534F9,0x26dbe20ef64a412b,1 +np.float64,0x406D1AB571CAA747,0x54ee0d55cb38ac20,1 +#use 16th entry +np.float64,0x406956428B7DAD09,0x52358682c271237f,1 +np.float64,0xC07EFC2D9D17B621,0x133b3e77c27a4d45,1 +np.float64,0xC08469BAC5BA3CCA,0x050863e5f42cc52f,1 +np.float64,0x407189D9626386A5,0x593cb1c0b3b5c1d3,1 +#use 17th entry +np.float64,0x4077E652E3DEB8C6,0x6269a10dcbd3c752,1 +np.float64,0x407674C97DB06878,0x605485dcc2426ec2,1 +np.float64,0xC07CE9969CF4268D,0x16386cf8996669f2,1 +np.float64,0x40780EE32D5847C4,0x62a436bd1abe108d,1 +#use 18th entry +np.float64,0x4076C3AA5E1E8DA1,0x60c62f56a5e72e24,1 +np.float64,0xC0730AFC7239B9BE,0x24758ead095cec1e,1 +np.float64,0xC085CC2B9C420DDB,0x0109cdaa2e5694c1,1 +np.float64,0x406D0765CB6D7AA4,0x54e06f8dd91bd945,1 +#use 19th entry +np.float64,0xC082D011F3B495E7,0x09a6647661d279c2,1 +np.float64,0xC072826AF8F6AFBC,0x253acd3cd224507e,1 +np.float64,0x404EB9C4810CEA09,0x457933dbf07e8133,1 +np.float64,0x408284FBC97C58CE,0x755f6eb234aa4b98,1 +#use 20th entry +np.float64,0x40856008CF6EDC63,0x7d9c0b3c03f4f73c,1 +np.float64,0xC077CB2E9F013B17,0x1d9b3d3a166a55db,1 +np.float64,0xC0479CA3C20AD057,0x3bad40e081555b99,1 +np.float64,0x40844CD31107332A,0x7a821d70aea478e2,1 +#use 21th entry +np.float64,0xC07C8FCC0BFCC844,0x16ba1cc8c539d19b,1 +np.float64,0xC085C4E9A3ABA488,0x011ff675ba1a2217,1 +np.float64,0x4074D538B32966E5,0x5dfd9d78043c6ad9,1 +np.float64,0xC0630CA16902AD46,0x3231a446074cede6,1 +#use 22th entry +np.float64,0xC06C826733D7D0B7,0x2b5f1078314d41e1,1 +np.float64,0xC0520DF55B2B907F,0x396c13a6ce8e833e,1 +np.float64,0xC080712072B0F437,0x107eae02d11d98ea,1 +np.float64,0x40528A6150E19EFB,0x469fdabda02228c5,1 +#use 23th entry +np.float64,0xC07B1D74B6586451,0x18d1253883ae3b48,1 +np.float64,0x4045AFD7867DAEC0,0x43d7d634fc4c5d98,1 +np.float64,0xC07A08B91F9ED3E2,0x1a60973e6397fc37,1 +np.float64,0x407B3ECF0AE21C8C,0x673e03e9d98d7235,1 +#use 24th entry +np.float64,0xC078AEB6F30CEABF,0x1c530b93ab54a1b3,1 +np.float64,0x4084495006A41672,0x7a775b6dc7e63064,1 +np.float64,0x40830B1C0EBF95DD,0x76e1e6eed77cfb89,1 +np.float64,0x407D93E8F33D8470,0x6a9adbc9e1e4f1e5,1 +#use 25th entry +np.float64,0x4066B11A09EFD9E8,0x504dd528065c28a7,1 +np.float64,0x408545823723AEEB,0x7d504a9b1844f594,1 +np.float64,0xC068C711F2CA3362,0x2e104f3496ea118e,1 +np.float64,0x407F317FCC3CA873,0x6cf0732c9948ebf4,1 +#use 26th entry +np.float64,0x407AFB3EBA2ED50F,0x66dc28a129c868d5,1 +np.float64,0xC075377037708ADE,0x21531a329f3d793e,1 +np.float64,0xC07C30066A1F3246,0x174448baa16ded2b,1 +np.float64,0xC06689A75DE2ABD3,0x2fad70662fae230b,1 +#use 27th entry +np.float64,0x4081514E9FCCF1E0,0x71e673b9efd15f44,1 +np.float64,0xC0762C710AF68460,0x1ff1ed7d8947fe43,1 +np.float64,0xC0468102FF70D9C4,0x3be0c3a8ff3419a3,1 +np.float64,0xC07EA4CEEF02A83E,0x13b908f085102c61,1 +#use 28th entry +np.float64,0xC06290B04AE823C4,0x328a83da3c2e3351,1 +np.float64,0xC0770EB1D1C395FB,0x1eab281c1f1db5fe,1 +np.float64,0xC06F5D4D838A5BAE,0x29500ea32fb474ea,1 +np.float64,0x40723B3133B54C5D,0x5a3c82c7c3a2b848,1 +#use 29th entry +np.float64,0x4085E6454CE3B4AA,0x7f20319b9638d06a,1 +np.float64,0x408389F2A0585D4B,0x7850667c58aab3d0,1 +np.float64,0xC0382798F9C8AE69,0x3dc1c79fe8739d6d,1 +np.float64,0xC08299D827608418,0x0a4335f76cdbaeb5,1 +#use 30th entry +np.float64,0xC06F3DED43301BF1,0x2965670ae46750a8,1 +np.float64,0xC070CAF6BDD577D9,0x27b4aa4ffdd29981,1 +np.float64,0x4078529AD4B2D9F2,0x6305c12755d5e0a6,1 +np.float64,0xC055B14E75A31B96,0x381c2eda6d111e5d,1 +#use 31th entry +np.float64,0x407B13EE414FA931,0x6700772c7544564d,1 +np.float64,0x407EAFDE9DE3EC54,0x6c346a0e49724a3c,1 +np.float64,0xC08362F398B9530D,0x07ffeddbadf980cb,1 +np.float64,0x407E865CDD9EEB86,0x6bf866cac5e0d126,1 +#use 32th entry +np.float64,0x407FB62DBC794C86,0x6db009f708ac62cb,1 +np.float64,0xC063D0BAA68CDDDE,0x31a3b2a51ce50430,1 +np.float64,0xC05E7706A2231394,0x34f24bead6fab5c9,1 +np.float64,0x4083E3A06FDE444E,0x79527b7a386d1937,1 diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-exp2.csv b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-exp2.csv new file mode 100644 index 0000000000000000000000000000000000000000..4e0a63e8e2c5061d6a158f9347a6085e5e8c4ffa --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-exp2.csv @@ -0,0 +1,1429 @@ +dtype,input,output,ulperrortol +np.float32,0xbdfe94b0,0x3f6adda6,2 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b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-log.csv @@ -0,0 +1,271 @@ +dtype,input,output,ulperrortol +## +ve denormals ## +np.float32,0x004b4716,0xc2afbc1b,4 +np.float32,0x007b2490,0xc2aec01e,4 +np.float32,0x007c99fa,0xc2aeba17,4 +np.float32,0x00734a0c,0xc2aee1dc,4 +np.float32,0x0070de24,0xc2aeecba,4 +np.float32,0x007fffff,0xc2aeac50,4 +np.float32,0x00000001,0xc2ce8ed0,4 +## -ve denormals ## +np.float32,0x80495d65,0xffc00000,4 +np.float32,0x806894f6,0xffc00000,4 +np.float32,0x80555a76,0xffc00000,4 +np.float32,0x804e1fb8,0xffc00000,4 +np.float32,0x80687de9,0xffc00000,4 +np.float32,0x807fffff,0xffc00000,4 +np.float32,0x80000001,0xffc00000,4 +## +/-0.0f, +/-FLT_MIN +/-FLT_MAX ## +np.float32,0x00000000,0xff800000,4 +np.float32,0x80000000,0xff800000,4 +np.float32,0x7f7fffff,0x42b17218,4 +np.float32,0x80800000,0xffc00000,4 +np.float32,0xff7fffff,0xffc00000,4 +## 1.00f + 0x00000001 ## +np.float32,0x3f800000,0x00000000,4 +np.float32,0x3f800001,0x33ffffff,4 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+np.float32,0x3f485bda,0xbe7af308,4 +np.float32,0x3f47a660,0xbe7e942c,4 +np.float32,0x3f47d4d5,0xbe7da600,4 +np.float32,0x3f4b0a26,0xbe6d56be,4 +np.float32,0x3f4a4883,0xbe712924,4 +np.float32,0x3f4769e7,0xbe7fca84,4 +np.float32,0x3f499702,0xbe74ad3f,4 +np.float32,0x3f494ab1,0xbe763131,4 +np.float32,0x3f476b69,0xbe7fc2c6,4 +np.float32,0x3f4884e8,0xbe7a214a,4 +np.float32,0x3f486945,0xbe7aae76,4 +#float64 +## +ve denormal ## +np.float64,0x0000000000000001,0xc0874385446d71c3,1 +np.float64,0x0001000000000000,0xc086395a2079b70c,1 +np.float64,0x000fffffffffffff,0xc086232bdd7abcd2,1 +np.float64,0x0007ad63e2168cb6,0xc086290bc0b2980f,1 +## -ve denormal ## +np.float64,0x8000000000000001,0xfff8000000000001,1 +np.float64,0x8001000000000000,0xfff8000000000001,1 +np.float64,0x800fffffffffffff,0xfff8000000000001,1 +np.float64,0x8007ad63e2168cb6,0xfff8000000000001,1 +## +/-0.0f, MAX, MIN## +np.float64,0x0000000000000000,0xfff0000000000000,1 +np.float64,0x8000000000000000,0xfff0000000000000,1 +np.float64,0x7fefffffffffffff,0x40862e42fefa39ef,1 +np.float64,0xffefffffffffffff,0xfff8000000000001,1 +## near 1.0f ## +np.float64,0x3ff0000000000000,0x0000000000000000,1 +np.float64,0x3fe8000000000000,0xbfd269621134db92,1 +np.float64,0x3ff0000000000001,0x3cafffffffffffff,1 +np.float64,0x3ff0000020000000,0x3e7fffffe000002b,1 +np.float64,0x3ff0000000000001,0x3cafffffffffffff,1 +np.float64,0x3fefffffe0000000,0xbe70000008000005,1 +np.float64,0x3fefffffffffffff,0xbca0000000000000,1 +## random numbers ## +np.float64,0x02500186f3d9da56,0xc0855b8abf135773,1 +np.float64,0x09200815a3951173,0xc082ff1ad7131bdc,1 +np.float64,0x0da029623b0243d4,0xc0816fc994695bb5,1 +np.float64,0x48703b8ac483a382,0x40579213a313490b,1 +np.float64,0x09207b74c87c9860,0xc082fee20ff349ef,1 +np.float64,0x62c077698e8df947,0x407821c996d110f0,1 +np.float64,0x2350b45e87c3cfb0,0xc073d6b16b51d072,1 +np.float64,0x3990a23f9ff2b623,0xc051aa60eadd8c61,1 +np.float64,0x0d011386a116c348,0xc081a6cc7ea3b8fb,1 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+np.float64,0xe200b0cfc4016,0xc08ff1703cfb8e79,1 +np.float64,0x3fe230ea7e2461d5,0xbfea132d2385160e,1 +np.float64,0x7fd1f7ced723ef9d,0x408ff156bfbf92a4,1 +np.float64,0x3fea762818f4ec50,0xbfd18c12a88e5f79,1 +np.float64,0x7feea4ba7c7d4974,0x408fff8004164054,1 +np.float64,0x833ec605067d9,0xc08ff7b606383841,1 +np.float64,0x7fd0c2d7fea185af,0x408ff0894f3a0cf4,1 +np.float64,0x3fe1d7d61d23afac,0xbfeaf76fee875d3e,1 +np.float64,0x65adecb0cb5be,0xc08ffaa82cb09d68,1 diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-sin.csv b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-sin.csv new file mode 100644 index 0000000000000000000000000000000000000000..03e76ffc2c222772e872908e147d4347effc1626 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/data/umath-validation-set-sin.csv @@ -0,0 +1,1370 @@ +dtype,input,output,ulperrortol +## +ve denormals ## +np.float32,0x004b4716,0x004b4716,2 +np.float32,0x007b2490,0x007b2490,2 +np.float32,0x007c99fa,0x007c99fa,2 +np.float32,0x00734a0c,0x00734a0c,2 +np.float32,0x0070de24,0x0070de24,2 +np.float32,0x007fffff,0x007fffff,2 +np.float32,0x00000001,0x00000001,2 +## -ve denormals ## +np.float32,0x80495d65,0x80495d65,2 +np.float32,0x806894f6,0x806894f6,2 +np.float32,0x80555a76,0x80555a76,2 +np.float32,0x804e1fb8,0x804e1fb8,2 +np.float32,0x80687de9,0x80687de9,2 +np.float32,0x807fffff,0x807fffff,2 +np.float32,0x80000001,0x80000001,2 +## +/-0.0f, +/-FLT_MIN +/-FLT_MAX ## +np.float32,0x00000000,0x00000000,2 +np.float32,0x80000000,0x80000000,2 +np.float32,0x00800000,0x00800000,2 +np.float32,0x80800000,0x80800000,2 +## 1.00f ## +np.float32,0x3f800000,0x3f576aa4,2 +np.float32,0x3f800001,0x3f576aa6,2 +np.float32,0x3f800002,0x3f576aa7,2 +np.float32,0xc090a8b0,0x3f7b4e48,2 +np.float32,0x41ce3184,0x3f192d43,2 +np.float32,0xc1d85848,0xbf7161cb,2 +np.float32,0x402b8820,0x3ee3f29f,2 +np.float32,0x42b4e454,0x3f1d0151,2 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file mode 100644 index 0000000000000000000000000000000000000000..5e572e342cce28fd07a78db3f1893c043c1f7cf2 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/__pycache__/setup.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/checks.pyx b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/checks.pyx new file mode 100644 index 0000000000000000000000000000000000000000..c0bb1f3f5370970f5644227e1c25f1f88576cdd0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/checks.pyx @@ -0,0 +1,268 @@ +#cython: language_level=3 + +""" +Functions in this module give python-space wrappers for cython functions +exposed in numpy/__init__.pxd, so they can be tested in test_cython.py +""" +cimport numpy as cnp +cnp.import_array() + + +def is_td64(obj): + return cnp.is_timedelta64_object(obj) + + +def is_dt64(obj): + return cnp.is_datetime64_object(obj) + + +def get_dt64_value(obj): + return cnp.get_datetime64_value(obj) + + +def get_td64_value(obj): + return cnp.get_timedelta64_value(obj) + + +def get_dt64_unit(obj): + return cnp.get_datetime64_unit(obj) + + +def is_integer(obj): + return isinstance(obj, (cnp.integer, int)) + + +def get_datetime_iso_8601_strlen(): + return cnp.get_datetime_iso_8601_strlen(0, cnp.NPY_FR_ns) + + +def convert_datetime64_to_datetimestruct(): + cdef: + cnp.npy_datetimestruct dts + cnp.PyArray_DatetimeMetaData meta + cnp.int64_t value = 1647374515260292 + # i.e. (time.time() * 10**6) at 2022-03-15 20:01:55.260292 UTC + + meta.base = cnp.NPY_FR_us + meta.num = 1 + cnp.convert_datetime64_to_datetimestruct(&meta, value, &dts) + return dts + + +def make_iso_8601_datetime(dt: "datetime"): + cdef: + cnp.npy_datetimestruct dts + char result[36] # 36 corresponds to NPY_FR_s passed below + int local = 0 + int utc = 0 + int tzoffset = 0 + + dts.year = dt.year + dts.month = dt.month + dts.day = dt.day + dts.hour = dt.hour + dts.min = dt.minute + dts.sec = dt.second + dts.us = dt.microsecond + dts.ps = dts.as = 0 + + cnp.make_iso_8601_datetime( + &dts, + result, + sizeof(result), + local, + utc, + cnp.NPY_FR_s, + tzoffset, + cnp.NPY_NO_CASTING, + ) + return result + + +cdef cnp.broadcast multiiter_from_broadcast_obj(object bcast): + cdef dict iter_map = { + 1: cnp.PyArray_MultiIterNew1, + 2: cnp.PyArray_MultiIterNew2, + 3: cnp.PyArray_MultiIterNew3, + 4: cnp.PyArray_MultiIterNew4, + 5: cnp.PyArray_MultiIterNew5, + } + arrays = [x.base for x in bcast.iters] + cdef cnp.broadcast result = iter_map[len(arrays)](*arrays) + return result + + +def get_multiiter_size(bcast: "broadcast"): + cdef cnp.broadcast multi = multiiter_from_broadcast_obj(bcast) + return multi.size + + +def get_multiiter_number_of_dims(bcast: "broadcast"): + cdef cnp.broadcast multi = multiiter_from_broadcast_obj(bcast) + return multi.nd + + +def get_multiiter_current_index(bcast: "broadcast"): + cdef cnp.broadcast multi = multiiter_from_broadcast_obj(bcast) + return multi.index + + +def get_multiiter_num_of_iterators(bcast: "broadcast"): + cdef cnp.broadcast multi = multiiter_from_broadcast_obj(bcast) + return multi.numiter + + +def get_multiiter_shape(bcast: "broadcast"): + cdef cnp.broadcast multi = multiiter_from_broadcast_obj(bcast) + return tuple([multi.dimensions[i] for i in range(bcast.nd)]) + + +def get_multiiter_iters(bcast: "broadcast"): + cdef cnp.broadcast multi = multiiter_from_broadcast_obj(bcast) + return tuple([multi.iters[i] for i in range(bcast.numiter)]) + + +def get_default_integer(): + if cnp.NPY_DEFAULT_INT == cnp.NPY_LONG: + return cnp.dtype("long") + if cnp.NPY_DEFAULT_INT == cnp.NPY_INTP: + return cnp.dtype("intp") + return None + +def get_ravel_axis(): + return cnp.NPY_RAVEL_AXIS + + +def conv_intp(cnp.intp_t val): + return val + + +def get_dtype_flags(cnp.dtype dtype): + return dtype.flags + + +cdef cnp.NpyIter* npyiter_from_nditer_obj(object it): + """A function to create a NpyIter struct from a nditer object. + + This function is only meant for testing purposes and only extracts the + necessary info from nditer to test the functionality of NpyIter methods + """ + cdef: + cnp.NpyIter* cit + cnp.PyArray_Descr* op_dtypes[3] + cnp.npy_uint32 op_flags[3] + cnp.PyArrayObject* ops[3] + cnp.npy_uint32 flags = 0 + + if it.has_index: + flags |= cnp.NPY_ITER_C_INDEX + if it.has_delayed_bufalloc: + flags |= cnp.NPY_ITER_BUFFERED | cnp.NPY_ITER_DELAY_BUFALLOC + if it.has_multi_index: + flags |= cnp.NPY_ITER_MULTI_INDEX + + # one of READWRITE, READONLY and WRTIEONLY at the minimum must be specified for op_flags + for i in range(it.nop): + op_flags[i] = cnp.NPY_ITER_READONLY + + for i in range(it.nop): + op_dtypes[i] = cnp.PyArray_DESCR(it.operands[i]) + ops[i] = it.operands[i] + + cit = cnp.NpyIter_MultiNew(it.nop, &ops[0], flags, cnp.NPY_KEEPORDER, + cnp.NPY_NO_CASTING, &op_flags[0], + NULL) + return cit + + +def get_npyiter_size(it: "nditer"): + cdef cnp.NpyIter* cit = npyiter_from_nditer_obj(it) + result = cnp.NpyIter_GetIterSize(cit) + cnp.NpyIter_Deallocate(cit) + return result + + +def get_npyiter_ndim(it: "nditer"): + cdef cnp.NpyIter* cit = npyiter_from_nditer_obj(it) + result = cnp.NpyIter_GetNDim(cit) + cnp.NpyIter_Deallocate(cit) + return result + + +def get_npyiter_nop(it: "nditer"): + cdef cnp.NpyIter* cit = npyiter_from_nditer_obj(it) + result = cnp.NpyIter_GetNOp(cit) + cnp.NpyIter_Deallocate(cit) + return result + + +def get_npyiter_operands(it: "nditer"): + cdef cnp.NpyIter* cit = npyiter_from_nditer_obj(it) + try: + arr = cnp.NpyIter_GetOperandArray(cit) + return tuple([arr[i] for i in range(it.nop)]) + finally: + cnp.NpyIter_Deallocate(cit) + + +def get_npyiter_itviews(it: "nditer"): + cdef cnp.NpyIter* cit = npyiter_from_nditer_obj(it) + result = tuple([cnp.NpyIter_GetIterView(cit, i) for i in range(it.nop)]) + cnp.NpyIter_Deallocate(cit) + return result + + +def get_npyiter_dtypes(it: "nditer"): + cdef cnp.NpyIter* cit = npyiter_from_nditer_obj(it) + try: + arr = cnp.NpyIter_GetDescrArray(cit) + return tuple([arr[i] for i in range(it.nop)]) + finally: + cnp.NpyIter_Deallocate(cit) + + +def npyiter_has_delayed_bufalloc(it: "nditer"): + cdef cnp.NpyIter* cit = npyiter_from_nditer_obj(it) + result = cnp.NpyIter_HasDelayedBufAlloc(cit) + cnp.NpyIter_Deallocate(cit) + return result + + +def npyiter_has_index(it: "nditer"): + cdef cnp.NpyIter* cit = npyiter_from_nditer_obj(it) + result = cnp.NpyIter_HasIndex(cit) + cnp.NpyIter_Deallocate(cit) + return result + + +def npyiter_has_multi_index(it: "nditer"): + cdef cnp.NpyIter* cit = npyiter_from_nditer_obj(it) + result = cnp.NpyIter_HasMultiIndex(cit) + cnp.NpyIter_Deallocate(cit) + return result + + +def npyiter_has_finished(it: "nditer"): + cdef cnp.NpyIter* cit + try: + cit = npyiter_from_nditer_obj(it) + cnp.NpyIter_GotoIterIndex(cit, it.index) + return not (cnp.NpyIter_GetIterIndex(cit) < cnp.NpyIter_GetIterSize(cit)) + finally: + cnp.NpyIter_Deallocate(cit) + +def compile_fillwithbyte(): + # Regression test for gh-25878, mostly checks it compiles. + cdef cnp.npy_intp dims[2] + dims = (1, 2) + pos = cnp.PyArray_ZEROS(2, dims, cnp.NPY_UINT8, 0) + cnp.PyArray_FILLWBYTE(pos, 1) + return pos + +def inc2_cfloat_struct(cnp.ndarray[cnp.cfloat_t] arr): + # This works since we compile in C mode, it will fail in cpp mode + arr[1].real += 1 + arr[1].imag += 1 + # This works in both modes + arr[1].real = arr[1].real + 1 + arr[1].imag = arr[1].imag + 1 diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/meson.build b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/meson.build new file mode 100644 index 0000000000000000000000000000000000000000..c0ee5f89168c6e96b0620112fb5540d6d0e37bd6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/meson.build @@ -0,0 +1,37 @@ +project('checks', 'c', 'cython') + +py = import('python').find_installation(pure: false) + +cc = meson.get_compiler('c') +cy = meson.get_compiler('cython') + +# Keep synced with pyproject.toml +if not cy.version().version_compare('>=3.0.6') + error('tests requires Cython >= 3.0.6') +endif + +npy_include_path = run_command(py, [ + '-c', + 'import os; os.chdir(".."); import numpy; print(os.path.abspath(numpy.get_include()))' + ], check: true).stdout().strip() + +npy_path = run_command(py, [ + '-c', + 'import os; os.chdir(".."); import numpy; print(os.path.dirname(numpy.__file__).removesuffix("numpy"))' + ], check: true).stdout().strip() + +# TODO: This is a hack due to gh-25135, where cython may not find the right +# __init__.pyd file. +add_project_arguments('-I', npy_path, language : 'cython') + +py.extension_module( + 'checks', + 'checks.pyx', + install: false, + c_args: [ + '-DNPY_NO_DEPRECATED_API=0', # Cython still uses old NumPy C API + # Require 1.25+ to test datetime additions + '-DNPY_TARGET_VERSION=NPY_2_0_API_VERSION', + ], + include_directories: [npy_include_path], +) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/setup.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/setup.py new file mode 100644 index 0000000000000000000000000000000000000000..97b7b4317ffa140a122754cc6138f6bcc3a2fbe3 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/cython/setup.py @@ -0,0 +1,29 @@ +""" +Provide python-space access to the functions exposed in numpy/__init__.pxd +for testing. +""" + +import numpy as np +from distutils.core import setup +from Cython.Build import cythonize +from setuptools.extension import Extension +import os + +macros = [ + ("NPY_NO_DEPRECATED_API", 0), + # Require 1.25+ to test datetime additions + ("NPY_TARGET_VERSION", "NPY_2_0_API_VERSION"), +] + +checks = Extension( + "checks", + sources=[os.path.join('.', "checks.pyx")], + include_dirs=[np.get_include()], + define_macros=macros, +) + +extensions = [checks] + +setup( + ext_modules=cythonize(extensions) +) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/__pycache__/setup.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/__pycache__/setup.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..a4e2eeb462af0c16275f188e274681598449cc2c Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/__pycache__/setup.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/limited_api1.c b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/limited_api1.c new file mode 100644 index 0000000000000000000000000000000000000000..3dbf5698f1d4cfaf7ee859cce266e401f0d83ddd --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/limited_api1.c @@ -0,0 +1,17 @@ +#define Py_LIMITED_API 0x03060000 + +#include +#include +#include + +static PyModuleDef moduledef = { + .m_base = PyModuleDef_HEAD_INIT, + .m_name = "limited_api1" +}; + +PyMODINIT_FUNC PyInit_limited_api1(void) +{ + import_array(); + import_umath(); + return PyModule_Create(&moduledef); +} diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/limited_api2.pyx b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/limited_api2.pyx new file mode 100644 index 0000000000000000000000000000000000000000..327d5b038c6c8b7b00ab5272ec75fde74572ce0e --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/limited_api2.pyx @@ -0,0 +1,11 @@ +#cython: language_level=3 + +""" +Make sure cython can compile in limited API mode (see meson.build) +""" + +cdef extern from "numpy/arrayobject.h": + pass +cdef extern from "numpy/arrayscalars.h": + pass + diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/limited_api_latest.c b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/limited_api_latest.c new file mode 100644 index 0000000000000000000000000000000000000000..13668f2f0ebf78fbac1cbf98c9b474325f864e4d --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/limited_api_latest.c @@ -0,0 +1,19 @@ +#if Py_LIMITED_API != PY_VERSION_HEX & 0xffff0000 + # error "Py_LIMITED_API not defined to Python major+minor version" +#endif + +#include +#include +#include + +static PyModuleDef moduledef = { + .m_base = PyModuleDef_HEAD_INIT, + .m_name = "limited_api_latest" +}; + +PyMODINIT_FUNC PyInit_limited_api_latest(void) +{ + import_array(); + import_umath(); + return PyModule_Create(&moduledef); +} diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/meson.build b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/meson.build new file mode 100644 index 0000000000000000000000000000000000000000..65287d8654f50f93c8e2695b91d36f27c1bfe204 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/meson.build @@ -0,0 +1,59 @@ +project('checks', 'c', 'cython') + +py = import('python').find_installation(pure: false) + +cc = meson.get_compiler('c') +cy = meson.get_compiler('cython') + +# Keep synced with pyproject.toml +if not cy.version().version_compare('>=3.0.6') + error('tests requires Cython >= 3.0.6') +endif + +npy_include_path = run_command(py, [ + '-c', + 'import os; os.chdir(".."); import numpy; print(os.path.abspath(numpy.get_include()))' + ], check: true).stdout().strip() + +npy_path = run_command(py, [ + '-c', + 'import os; os.chdir(".."); import numpy; print(os.path.dirname(numpy.__file__).removesuffix("numpy"))' + ], check: true).stdout().strip() + +# TODO: This is a hack due to https://github.com/cython/cython/issues/5820, +# where cython may not find the right __init__.pyd file. +add_project_arguments('-I', npy_path, language : 'cython') + +py.extension_module( + 'limited_api1', + 'limited_api1.c', + c_args: [ + '-DNPY_NO_DEPRECATED_API=NPY_1_21_API_VERSION', + ], + include_directories: [npy_include_path], + limited_api: '3.6', +) + +py.extension_module( + 'limited_api_latest', + 'limited_api_latest.c', + c_args: [ + '-DNPY_NO_DEPRECATED_API=NPY_1_21_API_VERSION', + ], + include_directories: [npy_include_path], + limited_api: py.language_version(), +) + +py.extension_module( + 'limited_api2', + 'limited_api2.pyx', + install: false, + c_args: [ + '-DNPY_NO_DEPRECATED_API=0', + # Require 1.25+ to test datetime additions + '-DNPY_TARGET_VERSION=NPY_2_0_API_VERSION', + '-DCYTHON_LIMITED_API=1', + ], + include_directories: [npy_include_path], + limited_api: '3.7', +) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/setup.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/setup.py new file mode 100644 index 0000000000000000000000000000000000000000..18747dc80896c087f37a878674e7c3c34bbd1e3f --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/examples/limited_api/setup.py @@ -0,0 +1,22 @@ +""" +Build an example package using the limited Python C API. +""" + +import numpy as np +from setuptools import setup, Extension +import os + +macros = [("NPY_NO_DEPRECATED_API", 0), ("Py_LIMITED_API", "0x03060000")] + +limited_api = Extension( + "limited_api", + sources=[os.path.join('.', "limited_api.c")], + include_dirs=[np.get_include()], + define_macros=macros, +) + +extensions = [limited_api] + +setup( + ext_modules=extensions +) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test__exceptions.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test__exceptions.py new file mode 100644 index 0000000000000000000000000000000000000000..fe792c8e37da46310b26322f19f9d45caf7b1765 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test__exceptions.py @@ -0,0 +1,89 @@ +""" +Tests of the ._exceptions module. Primarily for exercising the __str__ methods. +""" + +import pickle + +import pytest +import numpy as np +from numpy.exceptions import AxisError + +_ArrayMemoryError = np._core._exceptions._ArrayMemoryError +_UFuncNoLoopError = np._core._exceptions._UFuncNoLoopError + +class TestArrayMemoryError: + def test_pickling(self): + """ Test that _ArrayMemoryError can be pickled """ + error = _ArrayMemoryError((1023,), np.dtype(np.uint8)) + res = pickle.loads(pickle.dumps(error)) + assert res._total_size == error._total_size + + def test_str(self): + e = _ArrayMemoryError((1023,), np.dtype(np.uint8)) + str(e) # not crashing is enough + + # testing these properties is easier than testing the full string repr + def test__size_to_string(self): + """ Test e._size_to_string """ + f = _ArrayMemoryError._size_to_string + Ki = 1024 + assert f(0) == '0 bytes' + assert f(1) == '1 bytes' + assert f(1023) == '1023 bytes' + assert f(Ki) == '1.00 KiB' + assert f(Ki+1) == '1.00 KiB' + assert f(10*Ki) == '10.0 KiB' + assert f(int(999.4*Ki)) == '999. KiB' + assert f(int(1023.4*Ki)) == '1023. KiB' + assert f(int(1023.5*Ki)) == '1.00 MiB' + assert f(Ki*Ki) == '1.00 MiB' + + # 1023.9999 Mib should round to 1 GiB + assert f(int(Ki*Ki*Ki*0.9999)) == '1.00 GiB' + assert f(Ki*Ki*Ki*Ki*Ki*Ki) == '1.00 EiB' + # larger than sys.maxsize, adding larger prefixes isn't going to help + # anyway. + assert f(Ki*Ki*Ki*Ki*Ki*Ki*123456) == '123456. EiB' + + def test__total_size(self): + """ Test e._total_size """ + e = _ArrayMemoryError((1,), np.dtype(np.uint8)) + assert e._total_size == 1 + + e = _ArrayMemoryError((2, 4), np.dtype((np.uint64, 16))) + assert e._total_size == 1024 + + +class TestUFuncNoLoopError: + def test_pickling(self): + """ Test that _UFuncNoLoopError can be pickled """ + assert isinstance(pickle.dumps(_UFuncNoLoopError), bytes) + + +@pytest.mark.parametrize("args", [ + (2, 1, None), + (2, 1, "test_prefix"), + ("test message",), +]) +class TestAxisError: + def test_attr(self, args): + """Validate attribute types.""" + exc = AxisError(*args) + if len(args) == 1: + assert exc.axis is None + assert exc.ndim is None + else: + axis, ndim, *_ = args + assert exc.axis == axis + assert exc.ndim == ndim + + def test_pickling(self, args): + """Test that `AxisError` can be pickled.""" + exc = AxisError(*args) + exc2 = pickle.loads(pickle.dumps(exc)) + + assert type(exc) is type(exc2) + for name in ("axis", "ndim", "args"): + attr1 = getattr(exc, name) + attr2 = getattr(exc2, name) + assert attr1 == attr2, name diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_abc.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_abc.py new file mode 100644 index 0000000000000000000000000000000000000000..f7ab6b6358812a42992967c11f61cefa6418cee7 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_abc.py @@ -0,0 +1,54 @@ +from numpy.testing import assert_ + +import numbers + +import numpy as np +from numpy._core.numerictypes import sctypes + +class TestABC: + def test_abstract(self): + assert_(issubclass(np.number, numbers.Number)) + + assert_(issubclass(np.inexact, numbers.Complex)) + assert_(issubclass(np.complexfloating, numbers.Complex)) + assert_(issubclass(np.floating, numbers.Real)) + + assert_(issubclass(np.integer, numbers.Integral)) + assert_(issubclass(np.signedinteger, numbers.Integral)) + assert_(issubclass(np.unsignedinteger, numbers.Integral)) + + def test_floats(self): + for t in sctypes['float']: + assert_(isinstance(t(), numbers.Real), + f"{t.__name__} is not instance of Real") + assert_(issubclass(t, numbers.Real), + f"{t.__name__} is not subclass of Real") + assert_(not isinstance(t(), numbers.Rational), + f"{t.__name__} is instance of Rational") + assert_(not issubclass(t, numbers.Rational), + f"{t.__name__} is subclass of Rational") + + def test_complex(self): + for t in sctypes['complex']: + assert_(isinstance(t(), numbers.Complex), + f"{t.__name__} is not instance of Complex") + assert_(issubclass(t, numbers.Complex), + f"{t.__name__} is not subclass of Complex") + assert_(not isinstance(t(), numbers.Real), + f"{t.__name__} is instance of Real") + assert_(not issubclass(t, numbers.Real), + f"{t.__name__} is subclass of Real") + + def test_int(self): + for t in sctypes['int']: + assert_(isinstance(t(), numbers.Integral), + f"{t.__name__} is not instance of Integral") + assert_(issubclass(t, numbers.Integral), + f"{t.__name__} is not subclass of Integral") + + def test_uint(self): + for t in sctypes['uint']: + assert_(isinstance(t(), numbers.Integral), + f"{t.__name__} is not instance of Integral") + assert_(issubclass(t, numbers.Integral), + f"{t.__name__} is not subclass of Integral") diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_api.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_api.py new file mode 100644 index 0000000000000000000000000000000000000000..5b9bdb60f1b31d6e45701b6a519fd5ca9f95d3df --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_api.py @@ -0,0 +1,585 @@ +import sys + +import numpy as np +import numpy._core.umath as ncu +from numpy._core._rational_tests import rational +import pytest +from numpy.testing import ( + assert_, assert_equal, assert_array_equal, assert_raises, assert_warns, + HAS_REFCOUNT + ) + + +def test_array_array(): + tobj = type(object) + ones11 = np.ones((1, 1), np.float64) + tndarray = type(ones11) + # Test is_ndarray + assert_equal(np.array(ones11, dtype=np.float64), ones11) + if HAS_REFCOUNT: + old_refcount = sys.getrefcount(tndarray) + np.array(ones11) + assert_equal(old_refcount, sys.getrefcount(tndarray)) + + # test None + assert_equal(np.array(None, dtype=np.float64), + np.array(np.nan, dtype=np.float64)) + if HAS_REFCOUNT: + old_refcount = sys.getrefcount(tobj) + np.array(None, dtype=np.float64) + assert_equal(old_refcount, sys.getrefcount(tobj)) + + # test scalar + assert_equal(np.array(1.0, dtype=np.float64), + np.ones((), dtype=np.float64)) + if HAS_REFCOUNT: + old_refcount = sys.getrefcount(np.float64) + np.array(np.array(1.0, dtype=np.float64), dtype=np.float64) + assert_equal(old_refcount, sys.getrefcount(np.float64)) + + # test string + S2 = np.dtype((bytes, 2)) + S3 = np.dtype((bytes, 3)) + S5 = np.dtype((bytes, 5)) + assert_equal(np.array(b"1.0", dtype=np.float64), + np.ones((), dtype=np.float64)) + assert_equal(np.array(b"1.0").dtype, S3) + assert_equal(np.array(b"1.0", dtype=bytes).dtype, S3) + assert_equal(np.array(b"1.0", dtype=S2), np.array(b"1.")) + assert_equal(np.array(b"1", dtype=S5), np.ones((), dtype=S5)) + + # test string + U2 = np.dtype((str, 2)) + U3 = np.dtype((str, 3)) + U5 = np.dtype((str, 5)) + assert_equal(np.array("1.0", dtype=np.float64), + np.ones((), dtype=np.float64)) + assert_equal(np.array("1.0").dtype, U3) + assert_equal(np.array("1.0", dtype=str).dtype, U3) + assert_equal(np.array("1.0", dtype=U2), np.array(str("1."))) + assert_equal(np.array("1", dtype=U5), np.ones((), dtype=U5)) + + builtins = getattr(__builtins__, '__dict__', __builtins__) + assert_(hasattr(builtins, 'get')) + + # test memoryview + dat = np.array(memoryview(b'1.0'), dtype=np.float64) + assert_equal(dat, [49.0, 46.0, 48.0]) + assert_(dat.dtype.type is np.float64) + + dat = np.array(memoryview(b'1.0')) + assert_equal(dat, [49, 46, 48]) + assert_(dat.dtype.type is np.uint8) + + # test array interface + a = np.array(100.0, dtype=np.float64) + o = type("o", (object,), + dict(__array_interface__=a.__array_interface__)) + assert_equal(np.array(o, dtype=np.float64), a) + + # test array_struct interface + a = np.array([(1, 4.0, 'Hello'), (2, 6.0, 'World')], + dtype=[('f0', int), ('f1', float), ('f2', str)]) + o = type("o", (object,), + dict(__array_struct__=a.__array_struct__)) + ## wasn't what I expected... is np.array(o) supposed to equal a ? + ## instead we get a array([...], dtype=">V18") + assert_equal(bytes(np.array(o).data), bytes(a.data)) + + # test array + def custom__array__(self, dtype=None, copy=None): + return np.array(100.0, dtype=dtype, copy=copy) + + o = type("o", (object,), dict(__array__=custom__array__))() + assert_equal(np.array(o, dtype=np.float64), np.array(100.0, np.float64)) + + # test recursion + nested = 1.5 + for i in range(ncu.MAXDIMS): + nested = [nested] + + # no error + np.array(nested) + + # Exceeds recursion limit + assert_raises(ValueError, np.array, [nested], dtype=np.float64) + + # Try with lists... + # float32 + assert_equal(np.array([None] * 10, dtype=np.float32), + np.full((10,), np.nan, dtype=np.float32)) + assert_equal(np.array([[None]] * 10, dtype=np.float32), + np.full((10, 1), np.nan, dtype=np.float32)) + assert_equal(np.array([[None] * 10], dtype=np.float32), + np.full((1, 10), np.nan, dtype=np.float32)) + assert_equal(np.array([[None] * 10] * 10, dtype=np.float32), + np.full((10, 10), np.nan, dtype=np.float32)) + # float64 + assert_equal(np.array([None] * 10, dtype=np.float64), + np.full((10,), np.nan, dtype=np.float64)) + assert_equal(np.array([[None]] * 10, dtype=np.float64), + np.full((10, 1), np.nan, dtype=np.float64)) + assert_equal(np.array([[None] * 10], dtype=np.float64), + np.full((1, 10), np.nan, dtype=np.float64)) + assert_equal(np.array([[None] * 10] * 10, dtype=np.float64), + np.full((10, 10), np.nan, dtype=np.float64)) + + assert_equal(np.array([1.0] * 10, dtype=np.float64), + np.ones((10,), dtype=np.float64)) + assert_equal(np.array([[1.0]] * 10, dtype=np.float64), + np.ones((10, 1), dtype=np.float64)) + assert_equal(np.array([[1.0] * 10], dtype=np.float64), + np.ones((1, 10), dtype=np.float64)) + assert_equal(np.array([[1.0] * 10] * 10, dtype=np.float64), + np.ones((10, 10), dtype=np.float64)) + + # Try with tuples + assert_equal(np.array((None,) * 10, dtype=np.float64), + np.full((10,), np.nan, dtype=np.float64)) + assert_equal(np.array([(None,)] * 10, dtype=np.float64), + np.full((10, 1), np.nan, dtype=np.float64)) + assert_equal(np.array([(None,) * 10], dtype=np.float64), + np.full((1, 10), np.nan, dtype=np.float64)) + assert_equal(np.array([(None,) * 10] * 10, dtype=np.float64), + np.full((10, 10), np.nan, dtype=np.float64)) + + assert_equal(np.array((1.0,) * 10, dtype=np.float64), + np.ones((10,), dtype=np.float64)) + assert_equal(np.array([(1.0,)] * 10, dtype=np.float64), + np.ones((10, 1), dtype=np.float64)) + assert_equal(np.array([(1.0,) * 10], dtype=np.float64), + np.ones((1, 10), dtype=np.float64)) + assert_equal(np.array([(1.0,) * 10] * 10, dtype=np.float64), + np.ones((10, 10), dtype=np.float64)) + +@pytest.mark.parametrize("array", [True, False]) +def test_array_impossible_casts(array): + # All builtin types can be forcibly cast, at least theoretically, + # but user dtypes cannot necessarily. + rt = rational(1, 2) + if array: + rt = np.array(rt) + with assert_raises(TypeError): + np.array(rt, dtype="M8") + + +def test_array_astype(): + a = np.arange(6, dtype='f4').reshape(2, 3) + # Default behavior: allows unsafe casts, keeps memory layout, + # always copies. + b = a.astype('i4') + assert_equal(a, b) + assert_equal(b.dtype, np.dtype('i4')) + assert_equal(a.strides, b.strides) + b = a.T.astype('i4') + assert_equal(a.T, b) + assert_equal(b.dtype, np.dtype('i4')) + assert_equal(a.T.strides, b.strides) + b = a.astype('f4') + assert_equal(a, b) + assert_(not (a is b)) + + # copy=False parameter skips a copy + b = a.astype('f4', copy=False) + assert_(a is b) + + # order parameter allows overriding of the memory layout, + # forcing a copy if the layout is wrong + b = a.astype('f4', order='F', copy=False) + assert_equal(a, b) + assert_(not (a is b)) + assert_(b.flags.f_contiguous) + + b = a.astype('f4', order='C', copy=False) + assert_equal(a, b) + assert_(a is b) + assert_(b.flags.c_contiguous) + + # casting parameter allows catching bad casts + b = a.astype('c8', casting='safe') + assert_equal(a, b) + assert_equal(b.dtype, np.dtype('c8')) + + assert_raises(TypeError, a.astype, 'i4', casting='safe') + + # subok=False passes through a non-subclassed array + b = a.astype('f4', subok=0, copy=False) + assert_(a is b) + + class MyNDArray(np.ndarray): + pass + + a = np.array([[0, 1, 2], [3, 4, 5]], dtype='f4').view(MyNDArray) + + # subok=True passes through a subclass + b = a.astype('f4', subok=True, copy=False) + assert_(a is b) + + # subok=True is default, and creates a subtype on a cast + b = a.astype('i4', copy=False) + assert_equal(a, b) + assert_equal(type(b), MyNDArray) + + # subok=False never returns a subclass + b = a.astype('f4', subok=False, copy=False) + assert_equal(a, b) + assert_(not (a is b)) + assert_(type(b) is not MyNDArray) + + # Make sure converting from string object to fixed length string + # does not truncate. + a = np.array([b'a'*100], dtype='O') + b = a.astype('S') + assert_equal(a, b) + assert_equal(b.dtype, np.dtype('S100')) + a = np.array(['a'*100], dtype='O') + b = a.astype('U') + assert_equal(a, b) + assert_equal(b.dtype, np.dtype('U100')) + + # Same test as above but for strings shorter than 64 characters + a = np.array([b'a'*10], dtype='O') + b = a.astype('S') + assert_equal(a, b) + assert_equal(b.dtype, np.dtype('S10')) + a = np.array(['a'*10], dtype='O') + b = a.astype('U') + assert_equal(a, b) + assert_equal(b.dtype, np.dtype('U10')) + + a = np.array(123456789012345678901234567890, dtype='O').astype('S') + assert_array_equal(a, np.array(b'1234567890' * 3, dtype='S30')) + a = np.array(123456789012345678901234567890, dtype='O').astype('U') + assert_array_equal(a, np.array('1234567890' * 3, dtype='U30')) + + a = np.array([123456789012345678901234567890], dtype='O').astype('S') + assert_array_equal(a, np.array(b'1234567890' * 3, dtype='S30')) + a = np.array([123456789012345678901234567890], dtype='O').astype('U') + assert_array_equal(a, np.array('1234567890' * 3, dtype='U30')) + + a = np.array(123456789012345678901234567890, dtype='S') + assert_array_equal(a, np.array(b'1234567890' * 3, dtype='S30')) + a = np.array(123456789012345678901234567890, dtype='U') + assert_array_equal(a, np.array('1234567890' * 3, dtype='U30')) + + a = np.array('a\u0140', dtype='U') + b = np.ndarray(buffer=a, dtype='uint32', shape=2) + assert_(b.size == 2) + + a = np.array([1000], dtype='i4') + assert_raises(TypeError, a.astype, 'S1', casting='safe') + + a = np.array(1000, dtype='i4') + assert_raises(TypeError, a.astype, 'U1', casting='safe') + + # gh-24023 + assert_raises(TypeError, a.astype) + +@pytest.mark.parametrize("dt", ["S", "U"]) +def test_array_astype_to_string_discovery_empty(dt): + # See also gh-19085 + arr = np.array([""], dtype=object) + # Note, the itemsize is the `0 -> 1` logic, which should change. + # The important part the test is rather that it does not error. + assert arr.astype(dt).dtype.itemsize == np.dtype(f"{dt}1").itemsize + + # check the same thing for `np.can_cast` (since it accepts arrays) + assert np.can_cast(arr, dt, casting="unsafe") + assert not np.can_cast(arr, dt, casting="same_kind") + # as well as for the object as a descriptor: + assert np.can_cast("O", dt, casting="unsafe") + +@pytest.mark.parametrize("dt", ["d", "f", "S13", "U32"]) +def test_array_astype_to_void(dt): + dt = np.dtype(dt) + arr = np.array([], dtype=dt) + assert arr.astype("V").dtype.itemsize == dt.itemsize + +def test_object_array_astype_to_void(): + # This is different to `test_array_astype_to_void` as object arrays + # are inspected. The default void is "V8" (8 is the length of double) + arr = np.array([], dtype="O").astype("V") + assert arr.dtype == "V8" + +@pytest.mark.parametrize("t", + np._core.sctypes['uint'] + + np._core.sctypes['int'] + + np._core.sctypes['float'] +) +def test_array_astype_warning(t): + # test ComplexWarning when casting from complex to float or int + a = np.array(10, dtype=np.complex128) + assert_warns(np.exceptions.ComplexWarning, a.astype, t) + +@pytest.mark.parametrize(["dtype", "out_dtype"], + [(np.bytes_, np.bool), + (np.str_, np.bool), + (np.dtype("S10,S9"), np.dtype("?,?")), + # The following also checks unaligned unicode access: + (np.dtype("S7,U9"), np.dtype("?,?"))]) +def test_string_to_boolean_cast(dtype, out_dtype): + # Only the last two (empty) strings are falsy (the `\0` is stripped): + arr = np.array( + ["10", "10\0\0\0", "0\0\0", "0", "False", " ", "", "\0"], + dtype=dtype) + expected = np.array( + [True, True, True, True, True, True, False, False], + dtype=out_dtype) + assert_array_equal(arr.astype(out_dtype), expected) + # As it's similar, check that nonzero behaves the same (structs are + # nonzero if all entries are) + assert_array_equal(np.nonzero(arr), np.nonzero(expected)) + +@pytest.mark.parametrize("str_type", [str, bytes, np.str_]) +@pytest.mark.parametrize("scalar_type", + [np.complex64, np.complex128, np.clongdouble]) +def test_string_to_complex_cast(str_type, scalar_type): + value = scalar_type(b"1+3j") + assert scalar_type(value) == 1+3j + assert np.array([value], dtype=object).astype(scalar_type)[()] == 1+3j + assert np.array(value).astype(scalar_type)[()] == 1+3j + arr = np.zeros(1, dtype=scalar_type) + arr[0] = value + assert arr[0] == 1+3j + +@pytest.mark.parametrize("dtype", np.typecodes["AllFloat"]) +def test_none_to_nan_cast(dtype): + # Note that at the time of writing this test, the scalar constructors + # reject None + arr = np.zeros(1, dtype=dtype) + arr[0] = None + assert np.isnan(arr)[0] + assert np.isnan(np.array(None, dtype=dtype))[()] + assert np.isnan(np.array([None], dtype=dtype))[0] + assert np.isnan(np.array(None).astype(dtype))[()] + +def test_copyto_fromscalar(): + a = np.arange(6, dtype='f4').reshape(2, 3) + + # Simple copy + np.copyto(a, 1.5) + assert_equal(a, 1.5) + np.copyto(a.T, 2.5) + assert_equal(a, 2.5) + + # Where-masked copy + mask = np.array([[0, 1, 0], [0, 0, 1]], dtype='?') + np.copyto(a, 3.5, where=mask) + assert_equal(a, [[2.5, 3.5, 2.5], [2.5, 2.5, 3.5]]) + mask = np.array([[0, 1], [1, 1], [1, 0]], dtype='?') + np.copyto(a.T, 4.5, where=mask) + assert_equal(a, [[2.5, 4.5, 4.5], [4.5, 4.5, 3.5]]) + +def test_copyto(): + a = np.arange(6, dtype='i4').reshape(2, 3) + + # Simple copy + np.copyto(a, [[3, 1, 5], [6, 2, 1]]) + assert_equal(a, [[3, 1, 5], [6, 2, 1]]) + + # Overlapping copy should work + np.copyto(a[:, :2], a[::-1, 1::-1]) + assert_equal(a, [[2, 6, 5], [1, 3, 1]]) + + # Defaults to 'same_kind' casting + assert_raises(TypeError, np.copyto, a, 1.5) + + # Force a copy with 'unsafe' casting, truncating 1.5 to 1 + np.copyto(a, 1.5, casting='unsafe') + assert_equal(a, 1) + + # Copying with a mask + np.copyto(a, 3, where=[True, False, True]) + assert_equal(a, [[3, 1, 3], [3, 1, 3]]) + + # Casting rule still applies with a mask + assert_raises(TypeError, np.copyto, a, 3.5, where=[True, False, True]) + + # Lists of integer 0's and 1's is ok too + np.copyto(a, 4.0, casting='unsafe', where=[[0, 1, 1], [1, 0, 0]]) + assert_equal(a, [[3, 4, 4], [4, 1, 3]]) + + # Overlapping copy with mask should work + np.copyto(a[:, :2], a[::-1, 1::-1], where=[[0, 1], [1, 1]]) + assert_equal(a, [[3, 4, 4], [4, 3, 3]]) + + # 'dst' must be an array + assert_raises(TypeError, np.copyto, [1, 2, 3], [2, 3, 4]) + +def test_copyto_permut(): + # test explicit overflow case + pad = 500 + l = [True] * pad + [True, True, True, True] + r = np.zeros(len(l)-pad) + d = np.ones(len(l)-pad) + mask = np.array(l)[pad:] + np.copyto(r, d, where=mask[::-1]) + + # test all permutation of possible masks, 9 should be sufficient for + # current 4 byte unrolled code + power = 9 + d = np.ones(power) + for i in range(2**power): + r = np.zeros(power) + l = [(i & x) != 0 for x in range(power)] + mask = np.array(l) + np.copyto(r, d, where=mask) + assert_array_equal(r == 1, l) + assert_equal(r.sum(), sum(l)) + + r = np.zeros(power) + np.copyto(r, d, where=mask[::-1]) + assert_array_equal(r == 1, l[::-1]) + assert_equal(r.sum(), sum(l)) + + r = np.zeros(power) + np.copyto(r[::2], d[::2], where=mask[::2]) + assert_array_equal(r[::2] == 1, l[::2]) + assert_equal(r[::2].sum(), sum(l[::2])) + + r = np.zeros(power) + np.copyto(r[::2], d[::2], where=mask[::-2]) + assert_array_equal(r[::2] == 1, l[::-2]) + assert_equal(r[::2].sum(), sum(l[::-2])) + + for c in [0xFF, 0x7F, 0x02, 0x10]: + r = np.zeros(power) + mask = np.array(l) + imask = np.array(l).view(np.uint8) + imask[mask != 0] = c + np.copyto(r, d, where=mask) + assert_array_equal(r == 1, l) + assert_equal(r.sum(), sum(l)) + + r = np.zeros(power) + np.copyto(r, d, where=True) + assert_equal(r.sum(), r.size) + r = np.ones(power) + d = np.zeros(power) + np.copyto(r, d, where=False) + assert_equal(r.sum(), r.size) + +def test_copy_order(): + a = np.arange(24).reshape(2, 1, 3, 4) + b = a.copy(order='F') + c = np.arange(24).reshape(2, 1, 4, 3).swapaxes(2, 3) + + def check_copy_result(x, y, ccontig, fcontig, strides=False): + assert_(not (x is y)) + assert_equal(x, y) + assert_equal(res.flags.c_contiguous, ccontig) + assert_equal(res.flags.f_contiguous, fcontig) + + # Validate the initial state of a, b, and c + assert_(a.flags.c_contiguous) + assert_(not a.flags.f_contiguous) + assert_(not b.flags.c_contiguous) + assert_(b.flags.f_contiguous) + assert_(not c.flags.c_contiguous) + assert_(not c.flags.f_contiguous) + + # Copy with order='C' + res = a.copy(order='C') + check_copy_result(res, a, ccontig=True, fcontig=False, strides=True) + res = b.copy(order='C') + check_copy_result(res, b, ccontig=True, fcontig=False, strides=False) + res = c.copy(order='C') + check_copy_result(res, c, ccontig=True, fcontig=False, strides=False) + res = np.copy(a, order='C') + check_copy_result(res, a, ccontig=True, fcontig=False, strides=True) + res = np.copy(b, order='C') + check_copy_result(res, b, ccontig=True, fcontig=False, strides=False) + res = np.copy(c, order='C') + check_copy_result(res, c, ccontig=True, fcontig=False, strides=False) + + # Copy with order='F' + res = a.copy(order='F') + check_copy_result(res, a, ccontig=False, fcontig=True, strides=False) + res = b.copy(order='F') + check_copy_result(res, b, ccontig=False, fcontig=True, strides=True) + res = c.copy(order='F') + check_copy_result(res, c, ccontig=False, fcontig=True, strides=False) + res = np.copy(a, order='F') + check_copy_result(res, a, ccontig=False, fcontig=True, strides=False) + res = np.copy(b, order='F') + check_copy_result(res, b, ccontig=False, fcontig=True, strides=True) + res = np.copy(c, order='F') + check_copy_result(res, c, ccontig=False, fcontig=True, strides=False) + + # Copy with order='K' + res = a.copy(order='K') + check_copy_result(res, a, ccontig=True, fcontig=False, strides=True) + res = b.copy(order='K') + check_copy_result(res, b, ccontig=False, fcontig=True, strides=True) + res = c.copy(order='K') + check_copy_result(res, c, ccontig=False, fcontig=False, strides=True) + res = np.copy(a, order='K') + check_copy_result(res, a, ccontig=True, fcontig=False, strides=True) + res = np.copy(b, order='K') + check_copy_result(res, b, ccontig=False, fcontig=True, strides=True) + res = np.copy(c, order='K') + check_copy_result(res, c, ccontig=False, fcontig=False, strides=True) + +def test_contiguous_flags(): + a = np.ones((4, 4, 1))[::2,:,:] + a.strides = a.strides[:2] + (-123,) + b = np.ones((2, 2, 1, 2, 2)).swapaxes(3, 4) + + def check_contig(a, ccontig, fcontig): + assert_(a.flags.c_contiguous == ccontig) + assert_(a.flags.f_contiguous == fcontig) + + # Check if new arrays are correct: + check_contig(a, False, False) + check_contig(b, False, False) + check_contig(np.empty((2, 2, 0, 2, 2)), True, True) + check_contig(np.array([[[1], [2]]], order='F'), True, True) + check_contig(np.empty((2, 2)), True, False) + check_contig(np.empty((2, 2), order='F'), False, True) + + # Check that np.array creates correct contiguous flags: + check_contig(np.array(a, copy=None), False, False) + check_contig(np.array(a, copy=None, order='C'), True, False) + check_contig(np.array(a, ndmin=4, copy=None, order='F'), False, True) + + # Check slicing update of flags and : + check_contig(a[0], True, True) + check_contig(a[None, ::4, ..., None], True, True) + check_contig(b[0, 0, ...], False, True) + check_contig(b[:, :, 0:0, :, :], True, True) + + # Test ravel and squeeze. + check_contig(a.ravel(), True, True) + check_contig(np.ones((1, 3, 1)).squeeze(), True, True) + +def test_broadcast_arrays(): + # Test user defined dtypes + a = np.array([(1, 2, 3)], dtype='u4,u4,u4') + b = np.array([(1, 2, 3), (4, 5, 6), (7, 8, 9)], dtype='u4,u4,u4') + result = np.broadcast_arrays(a, b) + assert_equal(result[0], np.array([(1, 2, 3), (1, 2, 3), (1, 2, 3)], dtype='u4,u4,u4')) + assert_equal(result[1], np.array([(1, 2, 3), (4, 5, 6), (7, 8, 9)], dtype='u4,u4,u4')) + +@pytest.mark.parametrize(["shape", "fill_value", "expected_output"], + [((2, 2), [5.0, 6.0], np.array([[5.0, 6.0], [5.0, 6.0]])), + ((3, 2), [1.0, 2.0], np.array([[1.0, 2.0], [1.0, 2.0], [1.0, 2.0]]))]) +def test_full_from_list(shape, fill_value, expected_output): + output = np.full(shape, fill_value) + assert_equal(output, expected_output) + +def test_astype_copyflag(): + # test the various copyflag options + arr = np.arange(10, dtype=np.intp) + + res_true = arr.astype(np.intp, copy=True) + assert not np.shares_memory(arr, res_true) + + res_false = arr.astype(np.intp, copy=False) + assert np.shares_memory(arr, res_false) + + res_false_float = arr.astype(np.float64, copy=False) + assert not np.shares_memory(arr, res_false_float) + + # _CopyMode enum isn't allowed + assert_raises(ValueError, arr.astype, np.float64, + copy=np._CopyMode.NEVER) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_argparse.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_argparse.py new file mode 100644 index 0000000000000000000000000000000000000000..cddee72ea04c2969a5d897656324dca680233386 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_argparse.py @@ -0,0 +1,71 @@ +""" +Tests for the private NumPy argument parsing functionality. +They mainly exists to ensure good test coverage without having to try the +weirder cases on actual numpy functions but test them in one place. + +The test function is defined in C to be equivalent to (errors may not always +match exactly, and could be adjusted): + + def func(arg1, /, arg2, *, arg3): + i = integer(arg1) # reproducing the 'i' parsing in Python. + return None +""" + +import pytest + +import numpy as np +from numpy._core._multiarray_tests import argparse_example_function as func + + +def test_invalid_integers(): + with pytest.raises(TypeError, + match="integer argument expected, got float"): + func(1.) + with pytest.raises(OverflowError): + func(2**100) + + +def test_missing_arguments(): + with pytest.raises(TypeError, + match="missing required positional argument 0"): + func() + with pytest.raises(TypeError, + match="missing required positional argument 0"): + func(arg2=1, arg3=4) + with pytest.raises(TypeError, + match=r"missing required argument \'arg2\' \(pos 1\)"): + func(1, arg3=5) + + +def test_too_many_positional(): + # the second argument is positional but can be passed as keyword. + with pytest.raises(TypeError, + match="takes from 2 to 3 positional arguments but 4 were given"): + func(1, 2, 3, 4) + + +def test_multiple_values(): + with pytest.raises(TypeError, + match=r"given by name \('arg2'\) and position \(position 1\)"): + func(1, 2, arg2=3) + + +def test_string_fallbacks(): + # We can (currently?) use numpy strings to test the "slow" fallbacks + # that should normally not be taken due to string interning. + arg2 = np.str_("arg2") + missing_arg = np.str_("missing_arg") + func(1, **{arg2: 3}) + with pytest.raises(TypeError, + match="got an unexpected keyword argument 'missing_arg'"): + func(2, **{missing_arg: 3}) + + +def test_too_many_arguments_method_forwarding(): + # Not directly related to the standard argument parsing, but we sometimes + # forward methods to Python: arr.mean() calls np._core._methods._mean() + # This adds code coverage for this `npy_forward_method`. + arr = np.arange(3) + args = range(1000) + with pytest.raises(TypeError): + arr.mean(*args) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_array_coercion.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_array_coercion.py new file mode 100644 index 0000000000000000000000000000000000000000..726e8d8252a8473485f1dd00e36b9b62980da8cc --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_array_coercion.py @@ -0,0 +1,898 @@ +""" +Tests for array coercion, mainly through testing `np.array` results directly. +Note that other such tests exist, e.g., in `test_api.py` and many corner-cases +are tested (sometimes indirectly) elsewhere. +""" + +from itertools import permutations, product + +import pytest +from pytest import param + +import numpy as np +import numpy._core._multiarray_umath as ncu +from numpy._core._rational_tests import rational + +from numpy.testing import ( + assert_array_equal, assert_warns, IS_PYPY) + + +def arraylikes(): + """ + Generator for functions converting an array into various array-likes. + If full is True (default) it includes array-likes not capable of handling + all dtypes. + """ + # base array: + def ndarray(a): + return a + + yield param(ndarray, id="ndarray") + + # subclass: + class MyArr(np.ndarray): + pass + + def subclass(a): + return a.view(MyArr) + + yield subclass + + class _SequenceLike(): + # Older NumPy versions, sometimes cared whether a protocol array was + # also _SequenceLike. This shouldn't matter, but keep it for now + # for __array__ and not the others. + def __len__(self): + raise TypeError + + def __getitem__(self): + raise TypeError + + # Array-interface + class ArrayDunder(_SequenceLike): + def __init__(self, a): + self.a = a + + def __array__(self, dtype=None, copy=None): + return self.a + + yield param(ArrayDunder, id="__array__") + + # memory-view + yield param(memoryview, id="memoryview") + + # Array-interface + class ArrayInterface: + def __init__(self, a): + self.a = a # need to hold on to keep interface valid + self.__array_interface__ = a.__array_interface__ + + yield param(ArrayInterface, id="__array_interface__") + + # Array-Struct + class ArrayStruct: + def __init__(self, a): + self.a = a # need to hold on to keep struct valid + self.__array_struct__ = a.__array_struct__ + + yield param(ArrayStruct, id="__array_struct__") + + +def scalar_instances(times=True, extended_precision=True, user_dtype=True): + # Hard-coded list of scalar instances. + # Floats: + yield param(np.sqrt(np.float16(5)), id="float16") + yield param(np.sqrt(np.float32(5)), id="float32") + yield param(np.sqrt(np.float64(5)), id="float64") + if extended_precision: + yield param(np.sqrt(np.longdouble(5)), id="longdouble") + + # Complex: + yield param(np.sqrt(np.complex64(2+3j)), id="complex64") + yield param(np.sqrt(np.complex128(2+3j)), id="complex128") + if extended_precision: + yield param(np.sqrt(np.clongdouble(2+3j)), id="clongdouble") + + # Bool: + # XFAIL: Bool should be added, but has some bad properties when it + # comes to strings, see also gh-9875 + # yield param(np.bool(0), id="bool") + + # Integers: + yield param(np.int8(2), id="int8") + yield param(np.int16(2), id="int16") + yield param(np.int32(2), id="int32") + yield param(np.int64(2), id="int64") + + yield param(np.uint8(2), id="uint8") + yield param(np.uint16(2), id="uint16") + yield param(np.uint32(2), id="uint32") + yield param(np.uint64(2), id="uint64") + + # Rational: + if user_dtype: + yield param(rational(1, 2), id="rational") + + # Cannot create a structured void scalar directly: + structured = np.array([(1, 3)], "i,i")[0] + assert isinstance(structured, np.void) + assert structured.dtype == np.dtype("i,i") + yield param(structured, id="structured") + + if times: + # Datetimes and timedelta + yield param(np.timedelta64(2), id="timedelta64[generic]") + yield param(np.timedelta64(23, "s"), id="timedelta64[s]") + yield param(np.timedelta64("NaT", "s"), id="timedelta64[s](NaT)") + + yield param(np.datetime64("NaT"), id="datetime64[generic](NaT)") + yield param(np.datetime64("2020-06-07 12:43", "ms"), id="datetime64[ms]") + + # Strings and unstructured void: + yield param(np.bytes_(b"1234"), id="bytes") + yield param(np.str_("2345"), id="unicode") + yield param(np.void(b"4321"), id="unstructured_void") + + +def is_parametric_dtype(dtype): + """Returns True if the dtype is a parametric legacy dtype (itemsize + is 0, or a datetime without units) + """ + if dtype.itemsize == 0: + return True + if issubclass(dtype.type, (np.datetime64, np.timedelta64)): + if dtype.name.endswith("64"): + # Generic time units + return True + return False + + +class TestStringDiscovery: + @pytest.mark.parametrize("obj", + [object(), 1.2, 10**43, None, "string"], + ids=["object", "1.2", "10**43", "None", "string"]) + def test_basic_stringlength(self, obj): + length = len(str(obj)) + expected = np.dtype(f"S{length}") + + assert np.array(obj, dtype="S").dtype == expected + assert np.array([obj], dtype="S").dtype == expected + + # A nested array is also discovered correctly + arr = np.array(obj, dtype="O") + assert np.array(arr, dtype="S").dtype == expected + # Also if we use the dtype class + assert np.array(arr, dtype=type(expected)).dtype == expected + # Check that .astype() behaves identical + assert arr.astype("S").dtype == expected + # The DType class is accepted by `.astype()` + assert arr.astype(type(np.dtype("S"))).dtype == expected + + @pytest.mark.parametrize("obj", + [object(), 1.2, 10**43, None, "string"], + ids=["object", "1.2", "10**43", "None", "string"]) + def test_nested_arrays_stringlength(self, obj): + length = len(str(obj)) + expected = np.dtype(f"S{length}") + arr = np.array(obj, dtype="O") + assert np.array([arr, arr], dtype="S").dtype == expected + + @pytest.mark.parametrize("arraylike", arraylikes()) + def test_unpack_first_level(self, arraylike): + # We unpack exactly one level of array likes + obj = np.array([None]) + obj[0] = np.array(1.2) + # the length of the included item, not of the float dtype + length = len(str(obj[0])) + expected = np.dtype(f"S{length}") + + obj = arraylike(obj) + # casting to string usually calls str(obj) + arr = np.array([obj], dtype="S") + assert arr.shape == (1, 1) + assert arr.dtype == expected + + +class TestScalarDiscovery: + def test_void_special_case(self): + # Void dtypes with structures discover tuples as elements + arr = np.array((1, 2, 3), dtype="i,i,i") + assert arr.shape == () + arr = np.array([(1, 2, 3)], dtype="i,i,i") + assert arr.shape == (1,) + + def test_char_special_case(self): + arr = np.array("string", dtype="c") + assert arr.shape == (6,) + assert arr.dtype.char == "c" + arr = np.array(["string"], dtype="c") + assert arr.shape == (1, 6) + assert arr.dtype.char == "c" + + def test_char_special_case_deep(self): + # Check that the character special case errors correctly if the + # array is too deep: + nested = ["string"] # 2 dimensions (due to string being sequence) + for i in range(ncu.MAXDIMS - 2): + nested = [nested] + + arr = np.array(nested, dtype='c') + assert arr.shape == (1,) * (ncu.MAXDIMS - 1) + (6,) + with pytest.raises(ValueError): + np.array([nested], dtype="c") + + def test_unknown_object(self): + arr = np.array(object()) + assert arr.shape == () + assert arr.dtype == np.dtype("O") + + @pytest.mark.parametrize("scalar", scalar_instances()) + def test_scalar(self, scalar): + arr = np.array(scalar) + assert arr.shape == () + assert arr.dtype == scalar.dtype + + arr = np.array([[scalar, scalar]]) + assert arr.shape == (1, 2) + assert arr.dtype == scalar.dtype + + # Additionally to string this test also runs into a corner case + # with datetime promotion (the difference is the promotion order). + @pytest.mark.filterwarnings("ignore:Promotion of numbers:FutureWarning") + def test_scalar_promotion(self): + for sc1, sc2 in product(scalar_instances(), scalar_instances()): + sc1, sc2 = sc1.values[0], sc2.values[0] + # test all combinations: + try: + arr = np.array([sc1, sc2]) + except (TypeError, ValueError): + # The promotion between two times can fail + # XFAIL (ValueError): Some object casts are currently undefined + continue + assert arr.shape == (2,) + try: + dt1, dt2 = sc1.dtype, sc2.dtype + expected_dtype = np.promote_types(dt1, dt2) + assert arr.dtype == expected_dtype + except TypeError as e: + # Will currently always go to object dtype + assert arr.dtype == np.dtype("O") + + @pytest.mark.parametrize("scalar", scalar_instances()) + def test_scalar_coercion(self, scalar): + # This tests various scalar coercion paths, mainly for the numerical + # types. It includes some paths not directly related to `np.array`. + if isinstance(scalar, np.inexact): + # Ensure we have a full-precision number if available + scalar = type(scalar)((scalar * 2)**0.5) + + if type(scalar) is rational: + # Rational generally fails due to a missing cast. In the future + # object casts should automatically be defined based on `setitem`. + pytest.xfail("Rational to object cast is undefined currently.") + + # Use casting from object: + arr = np.array(scalar, dtype=object).astype(scalar.dtype) + + # Test various ways to create an array containing this scalar: + arr1 = np.array(scalar).reshape(1) + arr2 = np.array([scalar]) + arr3 = np.empty(1, dtype=scalar.dtype) + arr3[0] = scalar + arr4 = np.empty(1, dtype=scalar.dtype) + arr4[:] = [scalar] + # All of these methods should yield the same results + assert_array_equal(arr, arr1) + assert_array_equal(arr, arr2) + assert_array_equal(arr, arr3) + assert_array_equal(arr, arr4) + + @pytest.mark.xfail(IS_PYPY, reason="`int(np.complex128(3))` fails on PyPy") + @pytest.mark.filterwarnings("ignore::numpy.exceptions.ComplexWarning") + @pytest.mark.parametrize("cast_to", scalar_instances()) + def test_scalar_coercion_same_as_cast_and_assignment(self, cast_to): + """ + Test that in most cases: + * `np.array(scalar, dtype=dtype)` + * `np.empty((), dtype=dtype)[()] = scalar` + * `np.array(scalar).astype(dtype)` + should behave the same. The only exceptions are parametric dtypes + (mainly datetime/timedelta without unit) and void without fields. + """ + dtype = cast_to.dtype # use to parametrize only the target dtype + + for scalar in scalar_instances(times=False): + scalar = scalar.values[0] + + if dtype.type == np.void: + if scalar.dtype.fields is not None and dtype.fields is None: + # Here, coercion to "V6" works, but the cast fails. + # Since the types are identical, SETITEM takes care of + # this, but has different rules than the cast. + with pytest.raises(TypeError): + np.array(scalar).astype(dtype) + np.array(scalar, dtype=dtype) + np.array([scalar], dtype=dtype) + continue + + # The main test, we first try to use casting and if it succeeds + # continue below testing that things are the same, otherwise + # test that the alternative paths at least also fail. + try: + cast = np.array(scalar).astype(dtype) + except (TypeError, ValueError, RuntimeError): + # coercion should also raise (error type may change) + with pytest.raises(Exception): + np.array(scalar, dtype=dtype) + + if (isinstance(scalar, rational) and + np.issubdtype(dtype, np.signedinteger)): + return + + with pytest.raises(Exception): + np.array([scalar], dtype=dtype) + # assignment should also raise + res = np.zeros((), dtype=dtype) + with pytest.raises(Exception): + res[()] = scalar + + return + + # Non error path: + arr = np.array(scalar, dtype=dtype) + assert_array_equal(arr, cast) + # assignment behaves the same + ass = np.zeros((), dtype=dtype) + ass[()] = scalar + assert_array_equal(ass, cast) + + @pytest.mark.parametrize("pyscalar", [10, 10.32, 10.14j, 10**100]) + def test_pyscalar_subclasses(self, pyscalar): + """NumPy arrays are read/write which means that anything but invariant + behaviour is on thin ice. However, we currently are happy to discover + subclasses of Python float, int, complex the same as the base classes. + This should potentially be deprecated. + """ + class MyScalar(type(pyscalar)): + pass + + res = np.array(MyScalar(pyscalar)) + expected = np.array(pyscalar) + assert_array_equal(res, expected) + + @pytest.mark.parametrize("dtype_char", np.typecodes["All"]) + def test_default_dtype_instance(self, dtype_char): + if dtype_char in "SU": + dtype = np.dtype(dtype_char + "1") + elif dtype_char == "V": + # Legacy behaviour was to use V8. The reason was float64 being the + # default dtype and that having 8 bytes. + dtype = np.dtype("V8") + else: + dtype = np.dtype(dtype_char) + + discovered_dtype, _ = ncu._discover_array_parameters([], type(dtype)) + + assert discovered_dtype == dtype + assert discovered_dtype.itemsize == dtype.itemsize + + @pytest.mark.parametrize("dtype", np.typecodes["Integer"]) + @pytest.mark.parametrize(["scalar", "error"], + [(np.float64(np.nan), ValueError), + (np.array(-1).astype(np.ulonglong)[()], OverflowError)]) + def test_scalar_to_int_coerce_does_not_cast(self, dtype, scalar, error): + """ + Signed integers are currently different in that they do not cast other + NumPy scalar, but instead use scalar.__int__(). The hardcoded + exception to this rule is `np.array(scalar, dtype=integer)`. + """ + dtype = np.dtype(dtype) + + # This is a special case using casting logic. It warns for the NaN + # but allows the cast (giving undefined behaviour). + with np.errstate(invalid="ignore"): + coerced = np.array(scalar, dtype=dtype) + cast = np.array(scalar).astype(dtype) + assert_array_equal(coerced, cast) + + # However these fail: + with pytest.raises(error): + np.array([scalar], dtype=dtype) + with pytest.raises(error): + cast[()] = scalar + + +class TestTimeScalars: + @pytest.mark.parametrize("dtype", [np.int64, np.float32]) + @pytest.mark.parametrize("scalar", + [param(np.timedelta64("NaT", "s"), id="timedelta64[s](NaT)"), + param(np.timedelta64(123, "s"), id="timedelta64[s]"), + param(np.datetime64("NaT", "generic"), id="datetime64[generic](NaT)"), + param(np.datetime64(1, "D"), id="datetime64[D]")],) + def test_coercion_basic(self, dtype, scalar): + # Note the `[scalar]` is there because np.array(scalar) uses stricter + # `scalar.__int__()` rules for backward compatibility right now. + arr = np.array(scalar, dtype=dtype) + cast = np.array(scalar).astype(dtype) + assert_array_equal(arr, cast) + + ass = np.ones((), dtype=dtype) + if issubclass(dtype, np.integer): + with pytest.raises(TypeError): + # raises, as would np.array([scalar], dtype=dtype), this is + # conversion from times, but behaviour of integers. + ass[()] = scalar + else: + ass[()] = scalar + assert_array_equal(ass, cast) + + @pytest.mark.parametrize("dtype", [np.int64, np.float32]) + @pytest.mark.parametrize("scalar", + [param(np.timedelta64(123, "ns"), id="timedelta64[ns]"), + param(np.timedelta64(12, "generic"), id="timedelta64[generic]")]) + def test_coercion_timedelta_convert_to_number(self, dtype, scalar): + # Only "ns" and "generic" timedeltas can be converted to numbers + # so these are slightly special. + arr = np.array(scalar, dtype=dtype) + cast = np.array(scalar).astype(dtype) + ass = np.ones((), dtype=dtype) + ass[()] = scalar # raises, as would np.array([scalar], dtype=dtype) + + assert_array_equal(arr, cast) + assert_array_equal(cast, cast) + + @pytest.mark.parametrize("dtype", ["S6", "U6"]) + @pytest.mark.parametrize(["val", "unit"], + [param(123, "s", id="[s]"), param(123, "D", id="[D]")]) + def test_coercion_assignment_datetime(self, val, unit, dtype): + # String from datetime64 assignment is currently special cased to + # never use casting. This is because casting will error in this + # case, and traditionally in most cases the behaviour is maintained + # like this. (`np.array(scalar, dtype="U6")` would have failed before) + # TODO: This discrepancy _should_ be resolved, either by relaxing the + # cast, or by deprecating the first part. + scalar = np.datetime64(val, unit) + dtype = np.dtype(dtype) + cut_string = dtype.type(str(scalar)[:6]) + + arr = np.array(scalar, dtype=dtype) + assert arr[()] == cut_string + ass = np.ones((), dtype=dtype) + ass[()] = scalar + assert ass[()] == cut_string + + with pytest.raises(RuntimeError): + # However, unlike the above assignment using `str(scalar)[:6]` + # due to being handled by the string DType and not be casting + # the explicit cast fails: + np.array(scalar).astype(dtype) + + + @pytest.mark.parametrize(["val", "unit"], + [param(123, "s", id="[s]"), param(123, "D", id="[D]")]) + def test_coercion_assignment_timedelta(self, val, unit): + scalar = np.timedelta64(val, unit) + + # Unlike datetime64, timedelta allows the unsafe cast: + np.array(scalar, dtype="S6") + cast = np.array(scalar).astype("S6") + ass = np.ones((), dtype="S6") + ass[()] = scalar + expected = scalar.astype("S")[:6] + assert cast[()] == expected + assert ass[()] == expected + +class TestNested: + def test_nested_simple(self): + initial = [1.2] + nested = initial + for i in range(ncu.MAXDIMS - 1): + nested = [nested] + + arr = np.array(nested, dtype="float64") + assert arr.shape == (1,) * ncu.MAXDIMS + with pytest.raises(ValueError): + np.array([nested], dtype="float64") + + with pytest.raises(ValueError, match=".*would exceed the maximum"): + np.array([nested]) # user must ask for `object` explicitly + + arr = np.array([nested], dtype=object) + assert arr.dtype == np.dtype("O") + assert arr.shape == (1,) * ncu.MAXDIMS + assert arr.item() is initial + + def test_pathological_self_containing(self): + # Test that this also works for two nested sequences + l = [] + l.append(l) + arr = np.array([l, l, l], dtype=object) + assert arr.shape == (3,) + (1,) * (ncu.MAXDIMS - 1) + + # Also check a ragged case: + arr = np.array([l, [None], l], dtype=object) + assert arr.shape == (3, 1) + + @pytest.mark.parametrize("arraylike", arraylikes()) + def test_nested_arraylikes(self, arraylike): + # We try storing an array like into an array, but the array-like + # will have too many dimensions. This means the shape discovery + # decides that the array-like must be treated as an object (a special + # case of ragged discovery). The result will be an array with one + # dimension less than the maximum dimensions, and the array being + # assigned to it (which does work for object or if `float(arraylike)` + # works). + initial = arraylike(np.ones((1, 1))) + + nested = initial + for i in range(ncu.MAXDIMS - 1): + nested = [nested] + + with pytest.raises(ValueError, match=".*would exceed the maximum"): + # It will refuse to assign the array into + np.array(nested, dtype="float64") + + # If this is object, we end up assigning a (1, 1) array into (1,) + # (due to running out of dimensions), this is currently supported but + # a special case which is not ideal. + arr = np.array(nested, dtype=object) + assert arr.shape == (1,) * ncu.MAXDIMS + assert arr.item() == np.array(initial).item() + + @pytest.mark.parametrize("arraylike", arraylikes()) + def test_uneven_depth_ragged(self, arraylike): + arr = np.arange(4).reshape((2, 2)) + arr = arraylike(arr) + + # Array is ragged in the second dimension already: + out = np.array([arr, [arr]], dtype=object) + assert out.shape == (2,) + assert out[0] is arr + assert type(out[1]) is list + + # Array is ragged in the third dimension: + with pytest.raises(ValueError): + # This is a broadcast error during assignment, because + # the array shape would be (2, 2, 2) but `arr[0, 0] = arr` fails. + np.array([arr, [arr, arr]], dtype=object) + + def test_empty_sequence(self): + arr = np.array([[], [1], [[1]]], dtype=object) + assert arr.shape == (3,) + + # The empty sequence stops further dimension discovery, so the + # result shape will be (0,) which leads to an error during: + with pytest.raises(ValueError): + np.array([[], np.empty((0, 1))], dtype=object) + + def test_array_of_different_depths(self): + # When multiple arrays (or array-likes) are included in a + # sequences and have different depth, we currently discover + # as many dimensions as they share. (see also gh-17224) + arr = np.zeros((3, 2)) + mismatch_first_dim = np.zeros((1, 2)) + mismatch_second_dim = np.zeros((3, 3)) + + dtype, shape = ncu._discover_array_parameters( + [arr, mismatch_second_dim], dtype=np.dtype("O")) + assert shape == (2, 3) + + dtype, shape = ncu._discover_array_parameters( + [arr, mismatch_first_dim], dtype=np.dtype("O")) + assert shape == (2,) + # The second case is currently supported because the arrays + # can be stored as objects: + res = np.asarray([arr, mismatch_first_dim], dtype=np.dtype("O")) + assert res[0] is arr + assert res[1] is mismatch_first_dim + + +class TestBadSequences: + # These are tests for bad objects passed into `np.array`, in general + # these have undefined behaviour. In the old code they partially worked + # when now they will fail. We could (and maybe should) create a copy + # of all sequences to be safe against bad-actors. + + def test_growing_list(self): + # List to coerce, `mylist` will append to it during coercion + obj = [] + class mylist(list): + def __len__(self): + obj.append([1, 2]) + return super().__len__() + + obj.append(mylist([1, 2])) + + with pytest.raises(RuntimeError): + np.array(obj) + + # Note: We do not test a shrinking list. These do very evil things + # and the only way to fix them would be to copy all sequences. + # (which may be a real option in the future). + + def test_mutated_list(self): + # List to coerce, `mylist` will mutate the first element + obj = [] + class mylist(list): + def __len__(self): + obj[0] = [2, 3] # replace with a different list. + return super().__len__() + + obj.append([2, 3]) + obj.append(mylist([1, 2])) + # Does not crash: + np.array(obj) + + def test_replace_0d_array(self): + # List to coerce, `mylist` will mutate the first element + obj = [] + class baditem: + def __len__(self): + obj[0][0] = 2 # replace with a different list. + raise ValueError("not actually a sequence!") + + def __getitem__(self): + pass + + # Runs into a corner case in the new code, the `array(2)` is cached + # so replacing it invalidates the cache. + obj.append([np.array(2), baditem()]) + with pytest.raises(RuntimeError): + np.array(obj) + + +class TestArrayLikes: + @pytest.mark.parametrize("arraylike", arraylikes()) + def test_0d_object_special_case(self, arraylike): + arr = np.array(0.) + obj = arraylike(arr) + # A single array-like is always converted: + res = np.array(obj, dtype=object) + assert_array_equal(arr, res) + + # But a single 0-D nested array-like never: + res = np.array([obj], dtype=object) + assert res[0] is obj + + @pytest.mark.parametrize("arraylike", arraylikes()) + @pytest.mark.parametrize("arr", [np.array(0.), np.arange(4)]) + def test_object_assignment_special_case(self, arraylike, arr): + obj = arraylike(arr) + empty = np.arange(1, dtype=object) + empty[:] = [obj] + assert empty[0] is obj + + def test_0d_generic_special_case(self): + class ArraySubclass(np.ndarray): + def __float__(self): + raise TypeError("e.g. quantities raise on this") + + arr = np.array(0.) + obj = arr.view(ArraySubclass) + res = np.array(obj) + # The subclass is simply cast: + assert_array_equal(arr, res) + + # If the 0-D array-like is included, __float__ is currently + # guaranteed to be used. We may want to change that, quantities + # and masked arrays half make use of this. + with pytest.raises(TypeError): + np.array([obj]) + + # The same holds for memoryview: + obj = memoryview(arr) + res = np.array(obj) + assert_array_equal(arr, res) + with pytest.raises(ValueError): + # The error type does not matter much here. + np.array([obj]) + + def test_arraylike_classes(self): + # The classes of array-likes should generally be acceptable to be + # stored inside a numpy (object) array. This tests all of the + # special attributes (since all are checked during coercion). + arr = np.array(np.int64) + assert arr[()] is np.int64 + arr = np.array([np.int64]) + assert arr[0] is np.int64 + + # This also works for properties/unbound methods: + class ArrayLike: + @property + def __array_interface__(self): + pass + + @property + def __array_struct__(self): + pass + + def __array__(self, dtype=None, copy=None): + pass + + arr = np.array(ArrayLike) + assert arr[()] is ArrayLike + arr = np.array([ArrayLike]) + assert arr[0] is ArrayLike + + @pytest.mark.skipif( + np.dtype(np.intp).itemsize < 8, reason="Needs 64bit platform") + def test_too_large_array_error_paths(self): + """Test the error paths, including for memory leaks""" + arr = np.array(0, dtype="uint8") + # Guarantees that a contiguous copy won't work: + arr = np.broadcast_to(arr, 2**62) + + for i in range(5): + # repeat, to ensure caching cannot have an effect: + with pytest.raises(MemoryError): + np.array(arr) + with pytest.raises(MemoryError): + np.array([arr]) + + @pytest.mark.parametrize("attribute", + ["__array_interface__", "__array__", "__array_struct__"]) + @pytest.mark.parametrize("error", [RecursionError, MemoryError]) + def test_bad_array_like_attributes(self, attribute, error): + # RecursionError and MemoryError are considered fatal. All errors + # (except AttributeError) should probably be raised in the future, + # but shapely made use of it, so it will require a deprecation. + + class BadInterface: + def __getattr__(self, attr): + if attr == attribute: + raise error + super().__getattr__(attr) + + with pytest.raises(error): + np.array(BadInterface()) + + @pytest.mark.parametrize("error", [RecursionError, MemoryError]) + def test_bad_array_like_bad_length(self, error): + # RecursionError and MemoryError are considered "critical" in + # sequences. We could expand this more generally though. (NumPy 1.20) + class BadSequence: + def __len__(self): + raise error + def __getitem__(self): + # must have getitem to be a Sequence + return 1 + + with pytest.raises(error): + np.array(BadSequence()) + + +class TestAsArray: + """Test expected behaviors of ``asarray``.""" + + def test_dtype_identity(self): + """Confirm the intended behavior for *dtype* kwarg. + + The result of ``asarray()`` should have the dtype provided through the + keyword argument, when used. This forces unique array handles to be + produced for unique np.dtype objects, but (for equivalent dtypes), the + underlying data (the base object) is shared with the original array + object. + + Ref https://github.com/numpy/numpy/issues/1468 + """ + int_array = np.array([1, 2, 3], dtype='i') + assert np.asarray(int_array) is int_array + + # The character code resolves to the singleton dtype object provided + # by the numpy package. + assert np.asarray(int_array, dtype='i') is int_array + + # Derive a dtype from n.dtype('i'), but add a metadata object to force + # the dtype to be distinct. + unequal_type = np.dtype('i', metadata={'spam': True}) + annotated_int_array = np.asarray(int_array, dtype=unequal_type) + assert annotated_int_array is not int_array + assert annotated_int_array.base is int_array + # Create an equivalent descriptor with a new and distinct dtype + # instance. + equivalent_requirement = np.dtype('i', metadata={'spam': True}) + annotated_int_array_alt = np.asarray(annotated_int_array, + dtype=equivalent_requirement) + assert unequal_type == equivalent_requirement + assert unequal_type is not equivalent_requirement + assert annotated_int_array_alt is not annotated_int_array + assert annotated_int_array_alt.dtype is equivalent_requirement + + # Check the same logic for a pair of C types whose equivalence may vary + # between computing environments. + # Find an equivalent pair. + integer_type_codes = ('i', 'l', 'q') + integer_dtypes = [np.dtype(code) for code in integer_type_codes] + typeA = None + typeB = None + for typeA, typeB in permutations(integer_dtypes, r=2): + if typeA == typeB: + assert typeA is not typeB + break + assert isinstance(typeA, np.dtype) and isinstance(typeB, np.dtype) + + # These ``asarray()`` calls may produce a new view or a copy, + # but never the same object. + long_int_array = np.asarray(int_array, dtype='l') + long_long_int_array = np.asarray(int_array, dtype='q') + assert long_int_array is not int_array + assert long_long_int_array is not int_array + assert np.asarray(long_int_array, dtype='q') is not long_int_array + array_a = np.asarray(int_array, dtype=typeA) + assert typeA == typeB + assert typeA is not typeB + assert array_a.dtype is typeA + assert array_a is not np.asarray(array_a, dtype=typeB) + assert np.asarray(array_a, dtype=typeB).dtype is typeB + assert array_a is np.asarray(array_a, dtype=typeB).base + + +class TestSpecialAttributeLookupFailure: + # An exception was raised while fetching the attribute + + class WeirdArrayLike: + @property + def __array__(self, dtype=None, copy=None): + raise RuntimeError("oops!") + + class WeirdArrayInterface: + @property + def __array_interface__(self): + raise RuntimeError("oops!") + + def test_deprecated(self): + with pytest.raises(RuntimeError): + np.array(self.WeirdArrayLike()) + with pytest.raises(RuntimeError): + np.array(self.WeirdArrayInterface()) + + +def test_subarray_from_array_construction(): + # Arrays are more complex, since they "broadcast" on success: + arr = np.array([1, 2]) + + res = arr.astype("2i") + assert_array_equal(res, [[1, 1], [2, 2]]) + + res = np.array(arr, dtype="(2,)i") + + assert_array_equal(res, [[1, 1], [2, 2]]) + + res = np.array([[(1,), (2,)], arr], dtype="2i") + assert_array_equal(res, [[[1, 1], [2, 2]], [[1, 1], [2, 2]]]) + + # Also try a multi-dimensional example: + arr = np.arange(5 * 2).reshape(5, 2) + expected = np.broadcast_to(arr[:, :, np.newaxis, np.newaxis], (5, 2, 2, 2)) + + res = arr.astype("(2,2)f") + assert_array_equal(res, expected) + + res = np.array(arr, dtype="(2,2)f") + assert_array_equal(res, expected) + + +def test_empty_string(): + # Empty strings are unfortunately often converted to S1 and we need to + # make sure we are filling the S1 and not the (possibly) detected S0 + # result. This should likely just return S0 and if not maybe the decision + # to return S1 should be moved. + res = np.array([""] * 10, dtype="S") + assert_array_equal(res, np.array("\0", "S1")) + assert res.dtype == "S1" + + arr = np.array([""] * 10, dtype=object) + + res = arr.astype("S") + assert_array_equal(res, b"") + assert res.dtype == "S1" + + res = np.array(arr, dtype="S") + assert_array_equal(res, b"") + # TODO: This is arguably weird/wrong, but seems old: + assert res.dtype == f"S{np.dtype('O').itemsize}" + + res = np.array([[""] * 10, arr], dtype="S") + assert_array_equal(res, b"") + assert res.shape == (2, 10) + assert res.dtype == "S1" diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_array_interface.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_array_interface.py new file mode 100644 index 0000000000000000000000000000000000000000..f8e0dfad64c52b2a5cb2684041ea027570027aa4 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_array_interface.py @@ -0,0 +1,218 @@ +import sys +import pytest +import numpy as np +from numpy.testing import extbuild, IS_WASM + + +@pytest.fixture +def get_module(tmp_path): + """ Some codes to generate data and manage temporary buffers use when + sharing with numpy via the array interface protocol. + """ + + if not sys.platform.startswith('linux'): + pytest.skip('link fails on cygwin') + if IS_WASM: + pytest.skip("Can't build module inside Wasm") + + prologue = ''' + #include + #define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION + #include + #include + #include + + NPY_NO_EXPORT + void delete_array_struct(PyObject *cap) { + + /* get the array interface structure */ + PyArrayInterface *inter = (PyArrayInterface*) + PyCapsule_GetPointer(cap, NULL); + + /* get the buffer by which data was shared */ + double *ptr = (double*)PyCapsule_GetContext(cap); + + /* for the purposes of the regression test set the elements + to nan */ + for (npy_intp i = 0; i < inter->shape[0]; ++i) + ptr[i] = nan(""); + + /* free the shared buffer */ + free(ptr); + + /* free the array interface structure */ + free(inter->shape); + free(inter); + + fprintf(stderr, "delete_array_struct\\ncap = %ld inter = %ld" + " ptr = %ld\\n", (long)cap, (long)inter, (long)ptr); + } + ''' + + functions = [ + ("new_array_struct", "METH_VARARGS", """ + + long long n_elem = 0; + double value = 0.0; + + if (!PyArg_ParseTuple(args, "Ld", &n_elem, &value)) { + Py_RETURN_NONE; + } + + /* allocate and initialize the data to share with numpy */ + long long n_bytes = n_elem*sizeof(double); + double *data = (double*)malloc(n_bytes); + + if (!data) { + PyErr_Format(PyExc_MemoryError, + "Failed to malloc %lld bytes", n_bytes); + + Py_RETURN_NONE; + } + + for (long long i = 0; i < n_elem; ++i) { + data[i] = value; + } + + /* calculate the shape and stride */ + int nd = 1; + + npy_intp *ss = (npy_intp*)malloc(2*nd*sizeof(npy_intp)); + npy_intp *shape = ss; + npy_intp *stride = ss + nd; + + shape[0] = n_elem; + stride[0] = sizeof(double); + + /* construct the array interface */ + PyArrayInterface *inter = (PyArrayInterface*) + malloc(sizeof(PyArrayInterface)); + + memset(inter, 0, sizeof(PyArrayInterface)); + + inter->two = 2; + inter->nd = nd; + inter->typekind = 'f'; + inter->itemsize = sizeof(double); + inter->shape = shape; + inter->strides = stride; + inter->data = data; + inter->flags = NPY_ARRAY_WRITEABLE | NPY_ARRAY_NOTSWAPPED | + NPY_ARRAY_ALIGNED | NPY_ARRAY_C_CONTIGUOUS; + + /* package into a capsule */ + PyObject *cap = PyCapsule_New(inter, NULL, delete_array_struct); + + /* save the pointer to the data */ + PyCapsule_SetContext(cap, data); + + fprintf(stderr, "new_array_struct\\ncap = %ld inter = %ld" + " ptr = %ld\\n", (long)cap, (long)inter, (long)data); + + return cap; + """) + ] + + more_init = "import_array();" + + try: + import array_interface_testing + return array_interface_testing + except ImportError: + pass + + # if it does not exist, build and load it + return extbuild.build_and_import_extension('array_interface_testing', + functions, + prologue=prologue, + include_dirs=[np.get_include()], + build_dir=tmp_path, + more_init=more_init) + + +@pytest.mark.slow +def test_cstruct(get_module): + + class data_source: + """ + This class is for testing the timing of the PyCapsule destructor + invoked when numpy release its reference to the shared data as part of + the numpy array interface protocol. If the PyCapsule destructor is + called early the shared data is freed and invalid memory accesses will + occur. + """ + + def __init__(self, size, value): + self.size = size + self.value = value + + @property + def __array_struct__(self): + return get_module.new_array_struct(self.size, self.value) + + # write to the same stream as the C code + stderr = sys.__stderr__ + + # used to validate the shared data. + expected_value = -3.1415 + multiplier = -10000.0 + + # create some data to share with numpy via the array interface + # assign the data an expected value. + stderr.write(' ---- create an object to share data ---- \n') + buf = data_source(256, expected_value) + stderr.write(' ---- OK!\n\n') + + # share the data + stderr.write(' ---- share data via the array interface protocol ---- \n') + arr = np.array(buf, copy=False) + stderr.write('arr.__array_interface___ = %s\n' % ( + str(arr.__array_interface__))) + stderr.write('arr.base = %s\n' % (str(arr.base))) + stderr.write(' ---- OK!\n\n') + + # release the source of the shared data. this will not release the data + # that was shared with numpy, that is done in the PyCapsule destructor. + stderr.write(' ---- destroy the object that shared data ---- \n') + buf = None + stderr.write(' ---- OK!\n\n') + + # check that we got the expected data. If the PyCapsule destructor we + # defined was prematurely called then this test will fail because our + # destructor sets the elements of the array to NaN before free'ing the + # buffer. Reading the values here may also cause a SEGV + assert np.allclose(arr, expected_value) + + # read the data. If the PyCapsule destructor we defined was prematurely + # called then reading the values here may cause a SEGV and will be reported + # as invalid reads by valgrind + stderr.write(' ---- read shared data ---- \n') + stderr.write('arr = %s\n' % (str(arr))) + stderr.write(' ---- OK!\n\n') + + # write to the shared buffer. If the shared data was prematurely deleted + # this will may cause a SEGV and valgrind will report invalid writes + stderr.write(' ---- modify shared data ---- \n') + arr *= multiplier + expected_value *= multiplier + stderr.write('arr.__array_interface___ = %s\n' % ( + str(arr.__array_interface__))) + stderr.write('arr.base = %s\n' % (str(arr.base))) + stderr.write(' ---- OK!\n\n') + + # read the data. If the shared data was prematurely deleted this + # will may cause a SEGV and valgrind will report invalid reads + stderr.write(' ---- read modified shared data ---- \n') + stderr.write('arr = %s\n' % (str(arr))) + stderr.write(' ---- OK!\n\n') + + # check that we got the expected data. If the PyCapsule destructor we + # defined was prematurely called then this test will fail because our + # destructor sets the elements of the array to NaN before free'ing the + # buffer. Reading the values here may also cause a SEGV + assert np.allclose(arr, expected_value) + + # free the shared data, the PyCapsule destructor should run here + stderr.write(' ---- free shared data ---- \n') + arr = None + stderr.write(' ---- OK!\n\n') diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_arraymethod.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_arraymethod.py new file mode 100644 index 0000000000000000000000000000000000000000..f10d9b98498765d077c6db936f16b04382dd9613 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_arraymethod.py @@ -0,0 +1,87 @@ +""" +This file tests the generic aspects of ArrayMethod. At the time of writing +this is private API, but when added, public API may be added here. +""" + +from __future__ import annotations + +import sys +import types +from typing import Any + +import pytest + +import numpy as np +from numpy._core._multiarray_umath import _get_castingimpl as get_castingimpl + + +class TestResolveDescriptors: + # Test mainly error paths of the resolve_descriptors function, + # note that the `casting_unittests` tests exercise this non-error paths. + + # Casting implementations are the main/only current user: + method = get_castingimpl(type(np.dtype("d")), type(np.dtype("f"))) + + @pytest.mark.parametrize("args", [ + (True,), # Not a tuple. + ((None,)), # Too few elements + ((None, None, None),), # Too many + ((None, None),), # Input dtype is None, which is invalid. + ((np.dtype("d"), True),), # Output dtype is not a dtype + ((np.dtype("f"), None),), # Input dtype does not match method + ]) + def test_invalid_arguments(self, args): + with pytest.raises(TypeError): + self.method._resolve_descriptors(*args) + + +class TestSimpleStridedCall: + # Test mainly error paths of the resolve_descriptors function, + # note that the `casting_unittests` tests exercise this non-error paths. + + # Casting implementations are the main/only current user: + method = get_castingimpl(type(np.dtype("d")), type(np.dtype("f"))) + + @pytest.mark.parametrize(["args", "error"], [ + ((True,), TypeError), # Not a tuple + (((None,),), TypeError), # Too few elements + ((None, None), TypeError), # Inputs are not arrays. + (((None, None, None),), TypeError), # Too many + (((np.arange(3), np.arange(3)),), TypeError), # Incorrect dtypes + (((np.ones(3, dtype=">d"), np.ones(3, dtype=" None: + """Test `ndarray.__class_getitem__`.""" + alias = cls[Any, Any] + assert isinstance(alias, types.GenericAlias) + assert alias.__origin__ is cls + + @pytest.mark.parametrize("arg_len", range(4)) + def test_subscript_tup(self, cls: type[np.ndarray], arg_len: int) -> None: + arg_tup = (Any,) * arg_len + if arg_len in (1, 2): + assert cls[arg_tup] + else: + match = f"Too {'few' if arg_len == 0 else 'many'} arguments" + with pytest.raises(TypeError, match=match): + cls[arg_tup] diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_arrayobject.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_arrayobject.py new file mode 100644 index 0000000000000000000000000000000000000000..ccab929b2a09771ec1b82e4fe141477a4058eafa --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_arrayobject.py @@ -0,0 +1,33 @@ +import pytest + +import numpy as np +from numpy.testing import assert_array_equal + + +def test_matrix_transpose_raises_error_for_1d(): + msg = "matrix transpose with ndim < 2 is undefined" + arr = np.arange(48) + with pytest.raises(ValueError, match=msg): + arr.mT + + +def test_matrix_transpose_equals_transpose_2d(): + arr = np.arange(48).reshape((6, 8)) + assert_array_equal(arr.T, arr.mT) + + +ARRAY_SHAPES_TO_TEST = ( + (5, 2), + (5, 2, 3), + (5, 2, 3, 4), +) + + +@pytest.mark.parametrize("shape", ARRAY_SHAPES_TO_TEST) +def test_matrix_transpose_equals_swapaxes(shape): + num_of_axes = len(shape) + vec = np.arange(shape[-1]) + arr = np.broadcast_to(vec, shape) + tgt = np.swapaxes(arr, num_of_axes - 2, num_of_axes - 1) + mT = arr.mT + assert_array_equal(tgt, mT) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_arrayprint.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_arrayprint.py new file mode 100644 index 0000000000000000000000000000000000000000..d9caced3c1bcee60afd5f4835f4f1581a1c65811 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_arrayprint.py @@ -0,0 +1,1191 @@ +import sys +import gc +from hypothesis import given +from hypothesis.extra import numpy as hynp +import pytest + +import numpy as np +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_warns, HAS_REFCOUNT, + assert_raises_regex, + ) +from numpy._core.arrayprint import _typelessdata +import textwrap + +class TestArrayRepr: + def test_nan_inf(self): + x = np.array([np.nan, np.inf]) + assert_equal(repr(x), 'array([nan, inf])') + + def test_subclass(self): + class sub(np.ndarray): pass + + # one dimensional + x1d = np.array([1, 2]).view(sub) + assert_equal(repr(x1d), 'sub([1, 2])') + + # two dimensional + x2d = np.array([[1, 2], [3, 4]]).view(sub) + assert_equal(repr(x2d), + 'sub([[1, 2],\n' + ' [3, 4]])') + + # two dimensional with flexible dtype + xstruct = np.ones((2,2), dtype=[('a', ' 1) + y = sub(None) + x[()] = y + y[()] = x + assert_equal(repr(x), + 'sub(sub(sub(..., dtype=object), dtype=object), dtype=object)') + assert_equal(str(x), '...') + x[()] = 0 # resolve circular references for garbage collector + + # nested 0d-subclass-object + x = sub(None) + x[()] = sub(None) + assert_equal(repr(x), 'sub(sub(None, dtype=object), dtype=object)') + assert_equal(str(x), 'None') + + # gh-10663 + class DuckCounter(np.ndarray): + def __getitem__(self, item): + result = super().__getitem__(item) + if not isinstance(result, DuckCounter): + result = result[...].view(DuckCounter) + return result + + def to_string(self): + return {0: 'zero', 1: 'one', 2: 'two'}.get(self.item(), 'many') + + def __str__(self): + if self.shape == (): + return self.to_string() + else: + fmt = {'all': lambda x: x.to_string()} + return np.array2string(self, formatter=fmt) + + dc = np.arange(5).view(DuckCounter) + assert_equal(str(dc), "[zero one two many many]") + assert_equal(str(dc[0]), "zero") + + def test_self_containing(self): + arr0d = np.array(None) + arr0d[()] = arr0d + assert_equal(repr(arr0d), + 'array(array(..., dtype=object), dtype=object)') + arr0d[()] = 0 # resolve recursion for garbage collector + + arr1d = np.array([None, None]) + arr1d[1] = arr1d + assert_equal(repr(arr1d), + 'array([None, array(..., dtype=object)], dtype=object)') + arr1d[1] = 0 # resolve recursion for garbage collector + + first = np.array(None) + second = np.array(None) + first[()] = second + second[()] = first + assert_equal(repr(first), + 'array(array(array(..., dtype=object), dtype=object), dtype=object)') + first[()] = 0 # resolve circular references for garbage collector + + def test_containing_list(self): + # printing square brackets directly would be ambiguuous + arr1d = np.array([None, None]) + arr1d[0] = [1, 2] + arr1d[1] = [3] + assert_equal(repr(arr1d), + 'array([list([1, 2]), list([3])], dtype=object)') + + def test_void_scalar_recursion(self): + # gh-9345 + repr(np.void(b'test')) # RecursionError ? + + def test_fieldless_structured(self): + # gh-10366 + no_fields = np.dtype([]) + arr_no_fields = np.empty(4, dtype=no_fields) + assert_equal(repr(arr_no_fields), 'array([(), (), (), ()], dtype=[])') + + +class TestComplexArray: + def test_str(self): + rvals = [0, 1, -1, np.inf, -np.inf, np.nan] + cvals = [complex(rp, ip) for rp in rvals for ip in rvals] + dtypes = [np.complex64, np.cdouble, np.clongdouble] + actual = [str(np.array([c], dt)) for c in cvals for dt in dtypes] + wanted = [ + '[0.+0.j]', '[0.+0.j]', '[0.+0.j]', + '[0.+1.j]', '[0.+1.j]', '[0.+1.j]', + '[0.-1.j]', '[0.-1.j]', '[0.-1.j]', + '[0.+infj]', '[0.+infj]', '[0.+infj]', + '[0.-infj]', '[0.-infj]', '[0.-infj]', + '[0.+nanj]', '[0.+nanj]', '[0.+nanj]', + '[1.+0.j]', '[1.+0.j]', '[1.+0.j]', + '[1.+1.j]', '[1.+1.j]', '[1.+1.j]', + '[1.-1.j]', '[1.-1.j]', '[1.-1.j]', + '[1.+infj]', '[1.+infj]', '[1.+infj]', + '[1.-infj]', '[1.-infj]', '[1.-infj]', + '[1.+nanj]', '[1.+nanj]', '[1.+nanj]', + '[-1.+0.j]', '[-1.+0.j]', '[-1.+0.j]', + '[-1.+1.j]', '[-1.+1.j]', '[-1.+1.j]', + '[-1.-1.j]', '[-1.-1.j]', '[-1.-1.j]', + '[-1.+infj]', '[-1.+infj]', '[-1.+infj]', + '[-1.-infj]', '[-1.-infj]', '[-1.-infj]', + '[-1.+nanj]', '[-1.+nanj]', '[-1.+nanj]', + '[inf+0.j]', '[inf+0.j]', '[inf+0.j]', + '[inf+1.j]', '[inf+1.j]', '[inf+1.j]', + '[inf-1.j]', '[inf-1.j]', '[inf-1.j]', + '[inf+infj]', '[inf+infj]', '[inf+infj]', + '[inf-infj]', '[inf-infj]', '[inf-infj]', + '[inf+nanj]', '[inf+nanj]', '[inf+nanj]', + '[-inf+0.j]', '[-inf+0.j]', '[-inf+0.j]', + '[-inf+1.j]', '[-inf+1.j]', '[-inf+1.j]', + '[-inf-1.j]', '[-inf-1.j]', '[-inf-1.j]', + '[-inf+infj]', '[-inf+infj]', '[-inf+infj]', + '[-inf-infj]', '[-inf-infj]', '[-inf-infj]', + '[-inf+nanj]', '[-inf+nanj]', '[-inf+nanj]', + '[nan+0.j]', '[nan+0.j]', '[nan+0.j]', + '[nan+1.j]', '[nan+1.j]', '[nan+1.j]', + '[nan-1.j]', '[nan-1.j]', '[nan-1.j]', + '[nan+infj]', '[nan+infj]', '[nan+infj]', + '[nan-infj]', '[nan-infj]', '[nan-infj]', + '[nan+nanj]', '[nan+nanj]', '[nan+nanj]'] + + for res, val in zip(actual, wanted): + assert_equal(res, val) + +class TestArray2String: + def test_basic(self): + """Basic test of array2string.""" + a = np.arange(3) + assert_(np.array2string(a) == '[0 1 2]') + assert_(np.array2string(a, max_line_width=4, legacy='1.13') == '[0 1\n 2]') + assert_(np.array2string(a, max_line_width=4) == '[0\n 1\n 2]') + + def test_unexpected_kwarg(self): + # ensure than an appropriate TypeError + # is raised when array2string receives + # an unexpected kwarg + + with assert_raises_regex(TypeError, 'nonsense'): + np.array2string(np.array([1, 2, 3]), + nonsense=None) + + def test_format_function(self): + """Test custom format function for each element in array.""" + def _format_function(x): + if np.abs(x) < 1: + return '.' + elif np.abs(x) < 2: + return 'o' + else: + return 'O' + + x = np.arange(3) + x_hex = "[0x0 0x1 0x2]" + x_oct = "[0o0 0o1 0o2]" + assert_(np.array2string(x, formatter={'all':_format_function}) == + "[. o O]") + assert_(np.array2string(x, formatter={'int_kind':_format_function}) == + "[. o O]") + assert_(np.array2string(x, formatter={'all':lambda x: "%.4f" % x}) == + "[0.0000 1.0000 2.0000]") + assert_equal(np.array2string(x, formatter={'int':lambda x: hex(x)}), + x_hex) + assert_equal(np.array2string(x, formatter={'int':lambda x: oct(x)}), + x_oct) + + x = np.arange(3.) + assert_(np.array2string(x, formatter={'float_kind':lambda x: "%.2f" % x}) == + "[0.00 1.00 2.00]") + assert_(np.array2string(x, formatter={'float':lambda x: "%.2f" % x}) == + "[0.00 1.00 2.00]") + + s = np.array(['abc', 'def']) + assert_(np.array2string(s, formatter={'numpystr':lambda s: s*2}) == + '[abcabc defdef]') + + def test_structure_format_mixed(self): + dt = np.dtype([('name', np.str_, 16), ('grades', np.float64, (2,))]) + x = np.array([('Sarah', (8.0, 7.0)), ('John', (6.0, 7.0))], dtype=dt) + assert_equal(np.array2string(x), + "[('Sarah', [8., 7.]) ('John', [6., 7.])]") + + np.set_printoptions(legacy='1.13') + try: + # for issue #5692 + A = np.zeros(shape=10, dtype=[("A", "M8[s]")]) + A[5:].fill(np.datetime64('NaT')) + assert_equal( + np.array2string(A), + textwrap.dedent("""\ + [('1970-01-01T00:00:00',) ('1970-01-01T00:00:00',) ('1970-01-01T00:00:00',) + ('1970-01-01T00:00:00',) ('1970-01-01T00:00:00',) ('NaT',) ('NaT',) + ('NaT',) ('NaT',) ('NaT',)]""") + ) + finally: + np.set_printoptions(legacy=False) + + # same again, but with non-legacy behavior + assert_equal( + np.array2string(A), + textwrap.dedent("""\ + [('1970-01-01T00:00:00',) ('1970-01-01T00:00:00',) + ('1970-01-01T00:00:00',) ('1970-01-01T00:00:00',) + ('1970-01-01T00:00:00',) ( 'NaT',) + ( 'NaT',) ( 'NaT',) + ( 'NaT',) ( 'NaT',)]""") + ) + + # and again, with timedeltas + A = np.full(10, 123456, dtype=[("A", "m8[s]")]) + A[5:].fill(np.datetime64('NaT')) + assert_equal( + np.array2string(A), + textwrap.dedent("""\ + [(123456,) (123456,) (123456,) (123456,) (123456,) ( 'NaT',) ( 'NaT',) + ( 'NaT',) ( 'NaT',) ( 'NaT',)]""") + ) + + def test_structure_format_int(self): + # See #8160 + struct_int = np.array([([1, -1],), ([123, 1],)], + dtype=[('B', 'i4', 2)]) + assert_equal(np.array2string(struct_int), + "[([ 1, -1],) ([123, 1],)]") + struct_2dint = np.array([([[0, 1], [2, 3]],), ([[12, 0], [0, 0]],)], + dtype=[('B', 'i4', (2, 2))]) + assert_equal(np.array2string(struct_2dint), + "[([[ 0, 1], [ 2, 3]],) ([[12, 0], [ 0, 0]],)]") + + def test_structure_format_float(self): + # See #8172 + array_scalar = np.array( + (1., 2.1234567890123456789, 3.), dtype=('f8,f8,f8')) + assert_equal(np.array2string(array_scalar), "(1., 2.12345679, 3.)") + + def test_unstructured_void_repr(self): + a = np.array([27, 91, 50, 75, 7, 65, 10, 8, + 27, 91, 51, 49,109, 82,101,100], dtype='u1').view('V8') + assert_equal(repr(a[0]), + r"np.void(b'\x1B\x5B\x32\x4B\x07\x41\x0A\x08')") + assert_equal(str(a[0]), r"b'\x1B\x5B\x32\x4B\x07\x41\x0A\x08'") + assert_equal(repr(a), + r"array([b'\x1B\x5B\x32\x4B\x07\x41\x0A\x08'," "\n" + r" b'\x1B\x5B\x33\x31\x6D\x52\x65\x64'], dtype='|V8')") + + assert_equal(eval(repr(a), vars(np)), a) + assert_equal(eval(repr(a[0]), dict(np=np)), a[0]) + + def test_edgeitems_kwarg(self): + # previously the global print options would be taken over the kwarg + arr = np.zeros(3, int) + assert_equal( + np.array2string(arr, edgeitems=1, threshold=0), + "[0 ... 0]" + ) + + def test_summarize_1d(self): + A = np.arange(1001) + strA = '[ 0 1 2 ... 998 999 1000]' + assert_equal(str(A), strA) + + reprA = 'array([ 0, 1, 2, ..., 998, 999, 1000])' + assert_equal(repr(A), reprA) + + def test_summarize_2d(self): + A = np.arange(1002).reshape(2, 501) + strA = '[[ 0 1 2 ... 498 499 500]\n' \ + ' [ 501 502 503 ... 999 1000 1001]]' + assert_equal(str(A), strA) + + reprA = 'array([[ 0, 1, 2, ..., 498, 499, 500],\n' \ + ' [ 501, 502, 503, ..., 999, 1000, 1001]])' + assert_equal(repr(A), reprA) + + def test_summarize_structure(self): + A = (np.arange(2002, dtype="i8", (2, 1001))]) + strB = "[([[1, 1, 1, ..., 1, 1, 1], [1, 1, 1, ..., 1, 1, 1]],)]" + assert_equal(str(B), strB) + + reprB = ( + "array([([[1, 1, 1, ..., 1, 1, 1], [1, 1, 1, ..., 1, 1, 1]],)],\n" + " dtype=[('i', '>i8', (2, 1001))])" + ) + assert_equal(repr(B), reprB) + + C = (np.arange(22, dtype=" 1: + # if the type is >1 byte, the non-native endian version + # must show endianness. + assert non_native_repr != native_repr + assert f"dtype='{non_native_dtype.byteorder}" in non_native_repr + + def test_linewidth_repr(self): + a = np.full(7, fill_value=2) + np.set_printoptions(linewidth=17) + assert_equal( + repr(a), + textwrap.dedent("""\ + array([2, 2, 2, + 2, 2, 2, + 2])""") + ) + np.set_printoptions(linewidth=17, legacy='1.13') + assert_equal( + repr(a), + textwrap.dedent("""\ + array([2, 2, 2, + 2, 2, 2, 2])""") + ) + + a = np.full(8, fill_value=2) + + np.set_printoptions(linewidth=18, legacy=False) + assert_equal( + repr(a), + textwrap.dedent("""\ + array([2, 2, 2, + 2, 2, 2, + 2, 2])""") + ) + + np.set_printoptions(linewidth=18, legacy='1.13') + assert_equal( + repr(a), + textwrap.dedent("""\ + array([2, 2, 2, 2, + 2, 2, 2, 2])""") + ) + + def test_linewidth_str(self): + a = np.full(18, fill_value=2) + np.set_printoptions(linewidth=18) + assert_equal( + str(a), + textwrap.dedent("""\ + [2 2 2 2 2 2 2 2 + 2 2 2 2 2 2 2 2 + 2 2]""") + ) + np.set_printoptions(linewidth=18, legacy='1.13') + assert_equal( + str(a), + textwrap.dedent("""\ + [2 2 2 2 2 2 2 2 2 + 2 2 2 2 2 2 2 2 2]""") + ) + + def test_edgeitems(self): + np.set_printoptions(edgeitems=1, threshold=1) + a = np.arange(27).reshape((3, 3, 3)) + assert_equal( + repr(a), + textwrap.dedent("""\ + array([[[ 0, ..., 2], + ..., + [ 6, ..., 8]], + + ..., + + [[18, ..., 20], + ..., + [24, ..., 26]]])""") + ) + + b = np.zeros((3, 3, 1, 1)) + assert_equal( + repr(b), + textwrap.dedent("""\ + array([[[[0.]], + + ..., + + [[0.]]], + + + ..., + + + [[[0.]], + + ..., + + [[0.]]]])""") + ) + + # 1.13 had extra trailing spaces, and was missing newlines + np.set_printoptions(legacy='1.13') + + assert_equal( + repr(a), + textwrap.dedent("""\ + array([[[ 0, ..., 2], + ..., + [ 6, ..., 8]], + + ..., + [[18, ..., 20], + ..., + [24, ..., 26]]])""") + ) + + assert_equal( + repr(b), + textwrap.dedent("""\ + array([[[[ 0.]], + + ..., + [[ 0.]]], + + + ..., + [[[ 0.]], + + ..., + [[ 0.]]]])""") + ) + + def test_edgeitems_structured(self): + np.set_printoptions(edgeitems=1, threshold=1) + A = np.arange(5*2*3, dtype="f4')])"), + (np.void(b'a'), r"void(b'\x61')", r"np.void(b'\x61')"), + ]) +def test_scalar_repr_special(scalar, legacy_repr, representation): + # Test NEP 51 scalar repr (and legacy option) for numeric types + assert repr(scalar) == representation + + with np.printoptions(legacy="1.25"): + assert repr(scalar) == legacy_repr + +def test_scalar_void_float_str(): + # Note that based on this currently we do not print the same as a tuple + # would, since the tuple would include the repr() inside for floats, but + # we do not do that. + scalar = np.void((1.0, 2.0), dtype=[('f0', 'f4')]) + assert str(scalar) == "(1.0, 2.0)" diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_casting_floatingpoint_errors.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_casting_floatingpoint_errors.py new file mode 100644 index 0000000000000000000000000000000000000000..d448b94d979812aaf2220b770d9e8c246b9d4c16 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_casting_floatingpoint_errors.py @@ -0,0 +1,154 @@ +import pytest +from pytest import param +from numpy.testing import IS_WASM +import numpy as np + + +def values_and_dtypes(): + """ + Generate value+dtype pairs that generate floating point errors during + casts. The invalid casts to integers will generate "invalid" value + warnings, the float casts all generate "overflow". + + (The Python int/float paths don't need to get tested in all the same + situations, but it does not hurt.) + """ + # Casting to float16: + yield param(70000, "float16", id="int-to-f2") + yield param("70000", "float16", id="str-to-f2") + yield param(70000.0, "float16", id="float-to-f2") + yield param(np.longdouble(70000.), "float16", id="longdouble-to-f2") + yield param(np.float64(70000.), "float16", id="double-to-f2") + yield param(np.float32(70000.), "float16", id="float-to-f2") + # Casting to float32: + yield param(10**100, "float32", id="int-to-f4") + yield param(1e100, "float32", id="float-to-f2") + yield param(np.longdouble(1e300), "float32", id="longdouble-to-f2") + yield param(np.float64(1e300), "float32", id="double-to-f2") + # Casting to float64: + # If longdouble is double-double, its max can be rounded down to the double + # max. So we correct the double spacing (a bit weird, admittedly): + max_ld = np.finfo(np.longdouble).max + spacing = np.spacing(np.nextafter(np.finfo("f8").max, 0)) + if max_ld - spacing > np.finfo("f8").max: + yield param(np.finfo(np.longdouble).max, "float64", + id="longdouble-to-f8") + + # Cast to complex32: + yield param(2e300, "complex64", id="float-to-c8") + yield param(2e300+0j, "complex64", id="complex-to-c8") + yield param(2e300j, "complex64", id="complex-to-c8") + yield param(np.longdouble(2e300), "complex64", id="longdouble-to-c8") + + # Invalid float to integer casts: + with np.errstate(over="ignore"): + for to_dt in np.typecodes["AllInteger"]: + for value in [np.inf, np.nan]: + for from_dt in np.typecodes["AllFloat"]: + from_dt = np.dtype(from_dt) + from_val = from_dt.type(value) + + yield param(from_val, to_dt, id=f"{from_val}-to-{to_dt}") + + +def check_operations(dtype, value): + """ + There are many dedicated paths in NumPy which cast and should check for + floating point errors which occurred during those casts. + """ + if dtype.kind != 'i': + # These assignments use the stricter setitem logic: + def assignment(): + arr = np.empty(3, dtype=dtype) + arr[0] = value + + yield assignment + + def fill(): + arr = np.empty(3, dtype=dtype) + arr.fill(value) + + yield fill + + def copyto_scalar(): + arr = np.empty(3, dtype=dtype) + np.copyto(arr, value, casting="unsafe") + + yield copyto_scalar + + def copyto(): + arr = np.empty(3, dtype=dtype) + np.copyto(arr, np.array([value, value, value]), casting="unsafe") + + yield copyto + + def copyto_scalar_masked(): + arr = np.empty(3, dtype=dtype) + np.copyto(arr, value, casting="unsafe", + where=[True, False, True]) + + yield copyto_scalar_masked + + def copyto_masked(): + arr = np.empty(3, dtype=dtype) + np.copyto(arr, np.array([value, value, value]), casting="unsafe", + where=[True, False, True]) + + yield copyto_masked + + def direct_cast(): + np.array([value, value, value]).astype(dtype) + + yield direct_cast + + def direct_cast_nd_strided(): + arr = np.full((5, 5, 5), fill_value=value)[:, ::2, :] + arr.astype(dtype) + + yield direct_cast_nd_strided + + def boolean_array_assignment(): + arr = np.empty(3, dtype=dtype) + arr[[True, False, True]] = np.array([value, value]) + + yield boolean_array_assignment + + def integer_array_assignment(): + arr = np.empty(3, dtype=dtype) + values = np.array([value, value]) + + arr[[0, 1]] = values + + yield integer_array_assignment + + def integer_array_assignment_with_subspace(): + arr = np.empty((5, 3), dtype=dtype) + values = np.array([value, value, value]) + + arr[[0, 2]] = values + + yield integer_array_assignment_with_subspace + + def flat_assignment(): + arr = np.empty((3,), dtype=dtype) + values = np.array([value, value, value]) + arr.flat[:] = values + + yield flat_assignment + +@pytest.mark.skipif(IS_WASM, reason="no wasm fp exception support") +@pytest.mark.parametrize(["value", "dtype"], values_and_dtypes()) +@pytest.mark.filterwarnings("ignore::numpy.exceptions.ComplexWarning") +def test_floatingpoint_errors_casting(dtype, value): + dtype = np.dtype(dtype) + for operation in check_operations(dtype, value): + dtype = np.dtype(dtype) + + match = "invalid" if dtype.kind in 'iu' else "overflow" + with pytest.warns(RuntimeWarning, match=match): + operation() + + with np.errstate(all="raise"): + with pytest.raises(FloatingPointError, match=match): + operation() + diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_casting_unittests.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_casting_unittests.py new file mode 100644 index 0000000000000000000000000000000000000000..087d12a0af5348439abdec39cc5f890a67defa5a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_casting_unittests.py @@ -0,0 +1,818 @@ +""" +The tests exercise the casting machinery in a more low-level manner. +The reason is mostly to test a new implementation of the casting machinery. + +Unlike most tests in NumPy, these are closer to unit-tests rather +than integration tests. +""" + +import pytest +import textwrap +import enum +import random +import ctypes + +import numpy as np +from numpy.lib.stride_tricks import as_strided + +from numpy.testing import assert_array_equal +from numpy._core._multiarray_umath import _get_castingimpl as get_castingimpl + + +# Simple skips object, parametric and long double (unsupported by struct) +simple_dtypes = "?bhilqBHILQefdFD" +if np.dtype("l").itemsize != np.dtype("q").itemsize: + # Remove l and L, the table was generated with 64bit linux in mind. + simple_dtypes = simple_dtypes.replace("l", "").replace("L", "") +simple_dtypes = [type(np.dtype(c)) for c in simple_dtypes] + + +def simple_dtype_instances(): + for dtype_class in simple_dtypes: + dt = dtype_class() + yield pytest.param(dt, id=str(dt)) + if dt.byteorder != "|": + dt = dt.newbyteorder() + yield pytest.param(dt, id=str(dt)) + + +def get_expected_stringlength(dtype): + """Returns the string length when casting the basic dtypes to strings. + """ + if dtype == np.bool: + return 5 + if dtype.kind in "iu": + if dtype.itemsize == 1: + length = 3 + elif dtype.itemsize == 2: + length = 5 + elif dtype.itemsize == 4: + length = 10 + elif dtype.itemsize == 8: + length = 20 + else: + raise AssertionError(f"did not find expected length for {dtype}") + + if dtype.kind == "i": + length += 1 # adds one character for the sign + + return length + + # Note: Can't do dtype comparison for longdouble on windows + if dtype.char == "g": + return 48 + elif dtype.char == "G": + return 48 * 2 + elif dtype.kind == "f": + return 32 # also for half apparently. + elif dtype.kind == "c": + return 32 * 2 + + raise AssertionError(f"did not find expected length for {dtype}") + + +class Casting(enum.IntEnum): + no = 0 + equiv = 1 + safe = 2 + same_kind = 3 + unsafe = 4 + + +def _get_cancast_table(): + table = textwrap.dedent(""" + X ? b h i l q B H I L Q e f d g F D G S U V O M m + ? # = = = = = = = = = = = = = = = = = = = = = . = + b . # = = = = . . . . . = = = = = = = = = = = . = + h . ~ # = = = . . . . . ~ = = = = = = = = = = . = + i . ~ ~ # = = . . . . . ~ ~ = = ~ = = = = = = . = + l . ~ ~ ~ # # . . . . . ~ ~ = = ~ = = = = = = . = + q . ~ ~ ~ # # . . . . . ~ ~ = = ~ = = = = = = . = + B . ~ = = = = # = = = = = = = = = = = = = = = . = + H . ~ ~ = = = ~ # = = = ~ = = = = = = = = = = . = + I . ~ ~ ~ = = ~ ~ # = = ~ ~ = = ~ = = = = = = . = + L . ~ ~ ~ ~ ~ ~ ~ ~ # # ~ ~ = = ~ = = = = = = . ~ + Q . ~ ~ ~ ~ ~ ~ ~ ~ # # ~ ~ = = ~ = = = = = = . ~ + e . . . . . . . . . . . # = = = = = = = = = = . . + f . . . . . . . . . . . ~ # = = = = = = = = = . . + d . . . . . . . . . . . ~ ~ # = ~ = = = = = = . . + g . . . . . . . . . . . ~ ~ ~ # ~ ~ = = = = = . . + F . . . . . . . . . . . . . . . # = = = = = = . . + D . . . . . . . . . . . . . . . ~ # = = = = = . . + G . . . . . . . . . . . . . . . ~ ~ # = = = = . . + S . . . . . . . . . . . . . . . . . . # = = = . . + U . . . . . . . . . . . . . . . . . . . # = = . . + V . . . . . . . . . . . . . . . . . . . . # = . . + O . . . . . . . . . . . . . . . . . . . . = # . . + M . . . . . . . . . . . . . . . . . . . . = = # . + m . . . . . . . . . . . . . . . . . . . . = = . # + """).strip().split("\n") + dtypes = [type(np.dtype(c)) for c in table[0][2::2]] + + convert_cast = {".": Casting.unsafe, "~": Casting.same_kind, + "=": Casting.safe, "#": Casting.equiv, + " ": -1} + + cancast = {} + for from_dt, row in zip(dtypes, table[1:]): + cancast[from_dt] = {} + for to_dt, c in zip(dtypes, row[2::2]): + cancast[from_dt][to_dt] = convert_cast[c] + + return cancast + +CAST_TABLE = _get_cancast_table() + + +class TestChanges: + """ + These test cases exercise some behaviour changes + """ + @pytest.mark.parametrize("string", ["S", "U"]) + @pytest.mark.parametrize("floating", ["e", "f", "d", "g"]) + def test_float_to_string(self, floating, string): + assert np.can_cast(floating, string) + # 100 is long enough to hold any formatted floating + assert np.can_cast(floating, f"{string}100") + + def test_to_void(self): + # But in general, we do consider these safe: + assert np.can_cast("d", "V") + assert np.can_cast("S20", "V") + + # Do not consider it a safe cast if the void is too smaller: + assert not np.can_cast("d", "V1") + assert not np.can_cast("S20", "V1") + assert not np.can_cast("U1", "V1") + # Structured to unstructured is just like any other: + assert np.can_cast("d,i", "V", casting="same_kind") + # Unstructured void to unstructured is actually no cast at all: + assert np.can_cast("V3", "V", casting="no") + assert np.can_cast("V0", "V", casting="no") + + +class TestCasting: + size = 1500 # Best larger than NPY_LOWLEVEL_BUFFER_BLOCKSIZE * itemsize + + def get_data(self, dtype1, dtype2): + if dtype2 is None or dtype1.itemsize >= dtype2.itemsize: + length = self.size // dtype1.itemsize + else: + length = self.size // dtype2.itemsize + + # Assume that the base array is well enough aligned for all inputs. + arr1 = np.empty(length, dtype=dtype1) + assert arr1.flags.c_contiguous + assert arr1.flags.aligned + + values = [random.randrange(-128, 128) for _ in range(length)] + + for i, value in enumerate(values): + # Use item assignment to ensure this is not using casting: + if value < 0 and dtype1.kind == "u": + # Manually rollover unsigned integers (-1 -> int.max) + value = value + np.iinfo(dtype1).max + 1 + arr1[i] = value + + if dtype2 is None: + if dtype1.char == "?": + values = [bool(v) for v in values] + return arr1, values + + if dtype2.char == "?": + values = [bool(v) for v in values] + + arr2 = np.empty(length, dtype=dtype2) + assert arr2.flags.c_contiguous + assert arr2.flags.aligned + + for i, value in enumerate(values): + # Use item assignment to ensure this is not using casting: + if value < 0 and dtype2.kind == "u": + # Manually rollover unsigned integers (-1 -> int.max) + value = value + np.iinfo(dtype2).max + 1 + arr2[i] = value + + return arr1, arr2, values + + def get_data_variation(self, arr1, arr2, aligned=True, contig=True): + """ + Returns a copy of arr1 that may be non-contiguous or unaligned, and a + matching array for arr2 (although not a copy). + """ + if contig: + stride1 = arr1.dtype.itemsize + stride2 = arr2.dtype.itemsize + elif aligned: + stride1 = 2 * arr1.dtype.itemsize + stride2 = 2 * arr2.dtype.itemsize + else: + stride1 = arr1.dtype.itemsize + 1 + stride2 = arr2.dtype.itemsize + 1 + + max_size1 = len(arr1) * 3 * arr1.dtype.itemsize + 1 + max_size2 = len(arr2) * 3 * arr2.dtype.itemsize + 1 + from_bytes = np.zeros(max_size1, dtype=np.uint8) + to_bytes = np.zeros(max_size2, dtype=np.uint8) + + # Sanity check that the above is large enough: + assert stride1 * len(arr1) <= from_bytes.nbytes + assert stride2 * len(arr2) <= to_bytes.nbytes + + if aligned: + new1 = as_strided(from_bytes[:-1].view(arr1.dtype), + arr1.shape, (stride1,)) + new2 = as_strided(to_bytes[:-1].view(arr2.dtype), + arr2.shape, (stride2,)) + else: + new1 = as_strided(from_bytes[1:].view(arr1.dtype), + arr1.shape, (stride1,)) + new2 = as_strided(to_bytes[1:].view(arr2.dtype), + arr2.shape, (stride2,)) + + new1[...] = arr1 + + if not contig: + # Ensure we did not overwrite bytes that should not be written: + offset = arr1.dtype.itemsize if aligned else 0 + buf = from_bytes[offset::stride1].tobytes() + assert buf.count(b"\0") == len(buf) + + if contig: + assert new1.flags.c_contiguous + assert new2.flags.c_contiguous + else: + assert not new1.flags.c_contiguous + assert not new2.flags.c_contiguous + + if aligned: + assert new1.flags.aligned + assert new2.flags.aligned + else: + assert not new1.flags.aligned or new1.dtype.alignment == 1 + assert not new2.flags.aligned or new2.dtype.alignment == 1 + + return new1, new2 + + @pytest.mark.parametrize("from_Dt", simple_dtypes) + def test_simple_cancast(self, from_Dt): + for to_Dt in simple_dtypes: + cast = get_castingimpl(from_Dt, to_Dt) + + for from_dt in [from_Dt(), from_Dt().newbyteorder()]: + default = cast._resolve_descriptors((from_dt, None))[1][1] + assert default == to_Dt() + del default + + for to_dt in [to_Dt(), to_Dt().newbyteorder()]: + casting, (from_res, to_res), view_off = ( + cast._resolve_descriptors((from_dt, to_dt))) + assert(type(from_res) == from_Dt) + assert(type(to_res) == to_Dt) + if view_off is not None: + # If a view is acceptable, this is "no" casting + # and byte order must be matching. + assert casting == Casting.no + # The above table lists this as "equivalent" + assert Casting.equiv == CAST_TABLE[from_Dt][to_Dt] + # Note that to_res may not be the same as from_dt + assert from_res.isnative == to_res.isnative + else: + if from_Dt == to_Dt: + # Note that to_res may not be the same as from_dt + assert from_res.isnative != to_res.isnative + assert casting == CAST_TABLE[from_Dt][to_Dt] + + if from_Dt is to_Dt: + assert(from_dt is from_res) + assert(to_dt is to_res) + + @pytest.mark.filterwarnings("ignore::numpy.exceptions.ComplexWarning") + @pytest.mark.parametrize("from_dt", simple_dtype_instances()) + def test_simple_direct_casts(self, from_dt): + """ + This test checks numeric direct casts for dtypes supported also by the + struct module (plus complex). It tries to be test a wide range of + inputs, but skips over possibly undefined behaviour (e.g. int rollover). + Longdouble and CLongdouble are tested, but only using double precision. + + If this test creates issues, it should possibly just be simplified + or even removed (checking whether unaligned/non-contiguous casts give + the same results is useful, though). + """ + for to_dt in simple_dtype_instances(): + to_dt = to_dt.values[0] + cast = get_castingimpl(type(from_dt), type(to_dt)) + + casting, (from_res, to_res), view_off = cast._resolve_descriptors( + (from_dt, to_dt)) + + if from_res is not from_dt or to_res is not to_dt: + # Do not test this case, it is handled in multiple steps, + # each of which should is tested individually. + return + + safe = casting <= Casting.safe + del from_res, to_res, casting + + arr1, arr2, values = self.get_data(from_dt, to_dt) + + cast._simple_strided_call((arr1, arr2)) + + # Check via python list + assert arr2.tolist() == values + + # Check that the same results are achieved for strided loops + arr1_o, arr2_o = self.get_data_variation(arr1, arr2, True, False) + cast._simple_strided_call((arr1_o, arr2_o)) + + assert_array_equal(arr2_o, arr2) + assert arr2_o.tobytes() == arr2.tobytes() + + # Check if alignment makes a difference, but only if supported + # and only if the alignment can be wrong + if ((from_dt.alignment == 1 and to_dt.alignment == 1) or + not cast._supports_unaligned): + return + + arr1_o, arr2_o = self.get_data_variation(arr1, arr2, False, True) + cast._simple_strided_call((arr1_o, arr2_o)) + + assert_array_equal(arr2_o, arr2) + assert arr2_o.tobytes() == arr2.tobytes() + + arr1_o, arr2_o = self.get_data_variation(arr1, arr2, False, False) + cast._simple_strided_call((arr1_o, arr2_o)) + + assert_array_equal(arr2_o, arr2) + assert arr2_o.tobytes() == arr2.tobytes() + + del arr1_o, arr2_o, cast + + @pytest.mark.parametrize("from_Dt", simple_dtypes) + def test_numeric_to_times(self, from_Dt): + # We currently only implement contiguous loops, so only need to + # test those. + from_dt = from_Dt() + + time_dtypes = [np.dtype("M8"), np.dtype("M8[ms]"), np.dtype("M8[4D]"), + np.dtype("m8"), np.dtype("m8[ms]"), np.dtype("m8[4D]")] + for time_dt in time_dtypes: + cast = get_castingimpl(type(from_dt), type(time_dt)) + + casting, (from_res, to_res), view_off = cast._resolve_descriptors( + (from_dt, time_dt)) + + assert from_res is from_dt + assert to_res is time_dt + del from_res, to_res + + assert casting & CAST_TABLE[from_Dt][type(time_dt)] + assert view_off is None + + int64_dt = np.dtype(np.int64) + arr1, arr2, values = self.get_data(from_dt, int64_dt) + arr2 = arr2.view(time_dt) + arr2[...] = np.datetime64("NaT") + + if time_dt == np.dtype("M8"): + # This is a bit of a strange path, and could probably be removed + arr1[-1] = 0 # ensure at least one value is not NaT + + # The cast currently succeeds, but the values are invalid: + cast._simple_strided_call((arr1, arr2)) + with pytest.raises(ValueError): + str(arr2[-1]) # e.g. conversion to string fails + return + + cast._simple_strided_call((arr1, arr2)) + + assert [int(v) for v in arr2.tolist()] == values + + # Check that the same results are achieved for strided loops + arr1_o, arr2_o = self.get_data_variation(arr1, arr2, True, False) + cast._simple_strided_call((arr1_o, arr2_o)) + + assert_array_equal(arr2_o, arr2) + assert arr2_o.tobytes() == arr2.tobytes() + + @pytest.mark.parametrize( + ["from_dt", "to_dt", "expected_casting", "expected_view_off", + "nom", "denom"], + [("M8[ns]", None, Casting.no, 0, 1, 1), + (str(np.dtype("M8[ns]").newbyteorder()), None, + Casting.equiv, None, 1, 1), + ("M8", "M8[ms]", Casting.safe, 0, 1, 1), + # should be invalid cast: + ("M8[ms]", "M8", Casting.unsafe, None, 1, 1), + ("M8[5ms]", "M8[5ms]", Casting.no, 0, 1, 1), + ("M8[ns]", "M8[ms]", Casting.same_kind, None, 1, 10**6), + ("M8[ms]", "M8[ns]", Casting.safe, None, 10**6, 1), + ("M8[ms]", "M8[7ms]", Casting.same_kind, None, 1, 7), + ("M8[4D]", "M8[1M]", Casting.same_kind, None, None, + # give full values based on NumPy 1.19.x + [-2**63, 0, -1, 1314, -1315, 564442610]), + ("m8[ns]", None, Casting.no, 0, 1, 1), + (str(np.dtype("m8[ns]").newbyteorder()), None, + Casting.equiv, None, 1, 1), + ("m8", "m8[ms]", Casting.safe, 0, 1, 1), + # should be invalid cast: + ("m8[ms]", "m8", Casting.unsafe, None, 1, 1), + ("m8[5ms]", "m8[5ms]", Casting.no, 0, 1, 1), + ("m8[ns]", "m8[ms]", Casting.same_kind, None, 1, 10**6), + ("m8[ms]", "m8[ns]", Casting.safe, None, 10**6, 1), + ("m8[ms]", "m8[7ms]", Casting.same_kind, None, 1, 7), + ("m8[4D]", "m8[1M]", Casting.unsafe, None, None, + # give full values based on NumPy 1.19.x + [-2**63, 0, 0, 1314, -1315, 564442610])]) + def test_time_to_time(self, from_dt, to_dt, + expected_casting, expected_view_off, + nom, denom): + from_dt = np.dtype(from_dt) + if to_dt is not None: + to_dt = np.dtype(to_dt) + + # Test a few values for casting (results generated with NumPy 1.19) + values = np.array([-2**63, 1, 2**63-1, 10000, -10000, 2**32]) + values = values.astype(np.dtype("int64").newbyteorder(from_dt.byteorder)) + assert values.dtype.byteorder == from_dt.byteorder + assert np.isnat(values.view(from_dt)[0]) + + DType = type(from_dt) + cast = get_castingimpl(DType, DType) + casting, (from_res, to_res), view_off = cast._resolve_descriptors( + (from_dt, to_dt)) + assert from_res is from_dt + assert to_res is to_dt or to_dt is None + assert casting == expected_casting + assert view_off == expected_view_off + + if nom is not None: + expected_out = (values * nom // denom).view(to_res) + expected_out[0] = "NaT" + else: + expected_out = np.empty_like(values) + expected_out[...] = denom + expected_out = expected_out.view(to_dt) + + orig_arr = values.view(from_dt) + orig_out = np.empty_like(expected_out) + + if casting == Casting.unsafe and (to_dt == "m8" or to_dt == "M8"): + # Casting from non-generic to generic units is an error and should + # probably be reported as an invalid cast earlier. + with pytest.raises(ValueError): + cast._simple_strided_call((orig_arr, orig_out)) + return + + for aligned in [True, True]: + for contig in [True, True]: + arr, out = self.get_data_variation( + orig_arr, orig_out, aligned, contig) + out[...] = 0 + cast._simple_strided_call((arr, out)) + assert_array_equal(out.view("int64"), expected_out.view("int64")) + + def string_with_modified_length(self, dtype, change_length): + fact = 1 if dtype.char == "S" else 4 + length = dtype.itemsize // fact + change_length + return np.dtype(f"{dtype.byteorder}{dtype.char}{length}") + + @pytest.mark.parametrize("other_DT", simple_dtypes) + @pytest.mark.parametrize("string_char", ["S", "U"]) + def test_string_cancast(self, other_DT, string_char): + fact = 1 if string_char == "S" else 4 + + string_DT = type(np.dtype(string_char)) + cast = get_castingimpl(other_DT, string_DT) + + other_dt = other_DT() + expected_length = get_expected_stringlength(other_dt) + string_dt = np.dtype(f"{string_char}{expected_length}") + + safety, (res_other_dt, res_dt), view_off = cast._resolve_descriptors( + (other_dt, None)) + assert res_dt.itemsize == expected_length * fact + assert safety == Casting.safe # we consider to string casts "safe" + assert view_off is None + assert isinstance(res_dt, string_DT) + + # These casts currently implement changing the string length, so + # check the cast-safety for too long/fixed string lengths: + for change_length in [-1, 0, 1]: + if change_length >= 0: + expected_safety = Casting.safe + else: + expected_safety = Casting.same_kind + + to_dt = self.string_with_modified_length(string_dt, change_length) + safety, (_, res_dt), view_off = cast._resolve_descriptors( + (other_dt, to_dt)) + assert res_dt is to_dt + assert safety == expected_safety + assert view_off is None + + # The opposite direction is always considered unsafe: + cast = get_castingimpl(string_DT, other_DT) + + safety, _, view_off = cast._resolve_descriptors((string_dt, other_dt)) + assert safety == Casting.unsafe + assert view_off is None + + cast = get_castingimpl(string_DT, other_DT) + safety, (_, res_dt), view_off = cast._resolve_descriptors( + (string_dt, None)) + assert safety == Casting.unsafe + assert view_off is None + assert other_dt is res_dt # returns the singleton for simple dtypes + + @pytest.mark.parametrize("string_char", ["S", "U"]) + @pytest.mark.parametrize("other_dt", simple_dtype_instances()) + def test_simple_string_casts_roundtrip(self, other_dt, string_char): + """ + Tests casts from and to string by checking the roundtripping property. + + The test also covers some string to string casts (but not all). + + If this test creates issues, it should possibly just be simplified + or even removed (checking whether unaligned/non-contiguous casts give + the same results is useful, though). + """ + string_DT = type(np.dtype(string_char)) + + cast = get_castingimpl(type(other_dt), string_DT) + cast_back = get_castingimpl(string_DT, type(other_dt)) + _, (res_other_dt, string_dt), _ = cast._resolve_descriptors( + (other_dt, None)) + + if res_other_dt is not other_dt: + # do not support non-native byteorder, skip test in that case + assert other_dt.byteorder != res_other_dt.byteorder + return + + orig_arr, values = self.get_data(other_dt, None) + str_arr = np.zeros(len(orig_arr), dtype=string_dt) + string_dt_short = self.string_with_modified_length(string_dt, -1) + str_arr_short = np.zeros(len(orig_arr), dtype=string_dt_short) + string_dt_long = self.string_with_modified_length(string_dt, 1) + str_arr_long = np.zeros(len(orig_arr), dtype=string_dt_long) + + assert not cast._supports_unaligned # if support is added, should test + assert not cast_back._supports_unaligned + + for contig in [True, False]: + other_arr, str_arr = self.get_data_variation( + orig_arr, str_arr, True, contig) + _, str_arr_short = self.get_data_variation( + orig_arr, str_arr_short.copy(), True, contig) + _, str_arr_long = self.get_data_variation( + orig_arr, str_arr_long, True, contig) + + cast._simple_strided_call((other_arr, str_arr)) + + cast._simple_strided_call((other_arr, str_arr_short)) + assert_array_equal(str_arr.astype(string_dt_short), str_arr_short) + + cast._simple_strided_call((other_arr, str_arr_long)) + assert_array_equal(str_arr, str_arr_long) + + if other_dt.kind == "b": + # Booleans do not roundtrip + continue + + other_arr[...] = 0 + cast_back._simple_strided_call((str_arr, other_arr)) + assert_array_equal(orig_arr, other_arr) + + other_arr[...] = 0 + cast_back._simple_strided_call((str_arr_long, other_arr)) + assert_array_equal(orig_arr, other_arr) + + @pytest.mark.parametrize("other_dt", ["S8", "U8"]) + @pytest.mark.parametrize("string_char", ["S", "U"]) + def test_string_to_string_cancast(self, other_dt, string_char): + other_dt = np.dtype(other_dt) + + fact = 1 if string_char == "S" else 4 + div = 1 if other_dt.char == "S" else 4 + + string_DT = type(np.dtype(string_char)) + cast = get_castingimpl(type(other_dt), string_DT) + + expected_length = other_dt.itemsize // div + string_dt = np.dtype(f"{string_char}{expected_length}") + + safety, (res_other_dt, res_dt), view_off = cast._resolve_descriptors( + (other_dt, None)) + assert res_dt.itemsize == expected_length * fact + assert isinstance(res_dt, string_DT) + + expected_view_off = None + if other_dt.char == string_char: + if other_dt.isnative: + expected_safety = Casting.no + expected_view_off = 0 + else: + expected_safety = Casting.equiv + elif string_char == "U": + expected_safety = Casting.safe + else: + expected_safety = Casting.unsafe + + assert view_off == expected_view_off + assert expected_safety == safety + + for change_length in [-1, 0, 1]: + to_dt = self.string_with_modified_length(string_dt, change_length) + safety, (_, res_dt), view_off = cast._resolve_descriptors( + (other_dt, to_dt)) + + assert res_dt is to_dt + if change_length <= 0: + assert view_off == expected_view_off + else: + assert view_off is None + if expected_safety == Casting.unsafe: + assert safety == expected_safety + elif change_length < 0: + assert safety == Casting.same_kind + elif change_length == 0: + assert safety == expected_safety + elif change_length > 0: + assert safety == Casting.safe + + @pytest.mark.parametrize("order1", [">", "<"]) + @pytest.mark.parametrize("order2", [">", "<"]) + def test_unicode_byteswapped_cast(self, order1, order2): + # Very specific tests (not using the castingimpl directly) + # that tests unicode bytedwaps including for unaligned array data. + dtype1 = np.dtype(f"{order1}U30") + dtype2 = np.dtype(f"{order2}U30") + data1 = np.empty(30 * 4 + 1, dtype=np.uint8)[1:].view(dtype1) + data2 = np.empty(30 * 4 + 1, dtype=np.uint8)[1:].view(dtype2) + if dtype1.alignment != 1: + # alignment should always be >1, but skip the check if not + assert not data1.flags.aligned + assert not data2.flags.aligned + + element = "this is a ünicode string‽" + data1[()] = element + # Test both `data1` and `data1.copy()` (which should be aligned) + for data in [data1, data1.copy()]: + data2[...] = data1 + assert data2[()] == element + assert data2.copy()[()] == element + + def test_void_to_string_special_case(self): + # Cover a small special case in void to string casting that could + # probably just as well be turned into an error (compare + # `test_object_to_parametric_internal_error` below). + assert np.array([], dtype="V5").astype("S").dtype.itemsize == 5 + assert np.array([], dtype="V5").astype("U").dtype.itemsize == 4 * 5 + + def test_object_to_parametric_internal_error(self): + # We reject casting from object to a parametric type, without + # figuring out the correct instance first. + object_dtype = type(np.dtype(object)) + other_dtype = type(np.dtype(str)) + cast = get_castingimpl(object_dtype, other_dtype) + with pytest.raises(TypeError, + match="casting from object to the parametric DType"): + cast._resolve_descriptors((np.dtype("O"), None)) + + @pytest.mark.parametrize("dtype", simple_dtype_instances()) + def test_object_and_simple_resolution(self, dtype): + # Simple test to exercise the cast when no instance is specified + object_dtype = type(np.dtype(object)) + cast = get_castingimpl(object_dtype, type(dtype)) + + safety, (_, res_dt), view_off = cast._resolve_descriptors( + (np.dtype("O"), dtype)) + assert safety == Casting.unsafe + assert view_off is None + assert res_dt is dtype + + safety, (_, res_dt), view_off = cast._resolve_descriptors( + (np.dtype("O"), None)) + assert safety == Casting.unsafe + assert view_off is None + assert res_dt == dtype.newbyteorder("=") + + @pytest.mark.parametrize("dtype", simple_dtype_instances()) + def test_simple_to_object_resolution(self, dtype): + # Simple test to exercise the cast when no instance is specified + object_dtype = type(np.dtype(object)) + cast = get_castingimpl(type(dtype), object_dtype) + + safety, (_, res_dt), view_off = cast._resolve_descriptors( + (dtype, None)) + assert safety == Casting.safe + assert view_off is None + assert res_dt is np.dtype("O") + + @pytest.mark.parametrize("casting", ["no", "unsafe"]) + def test_void_and_structured_with_subarray(self, casting): + # test case corresponding to gh-19325 + dtype = np.dtype([("foo", " casts may succeed or fail, but a NULL'ed array must + # behave the same as one filled with None's. + arr_normal = np.array([None] * 5) + arr_NULLs = np.empty_like(arr_normal) + ctypes.memset(arr_NULLs.ctypes.data, 0, arr_NULLs.nbytes) + # If the check fails (maybe it should) the test would lose its purpose: + assert arr_NULLs.tobytes() == b"\x00" * arr_NULLs.nbytes + + try: + expected = arr_normal.astype(dtype) + except TypeError: + with pytest.raises(TypeError): + arr_NULLs.astype(dtype), + else: + assert_array_equal(expected, arr_NULLs.astype(dtype)) + + @pytest.mark.parametrize("dtype", + np.typecodes["AllInteger"] + np.typecodes["AllFloat"]) + def test_nonstandard_bool_to_other(self, dtype): + # simple test for casting bool_ to numeric types, which should not + # expose the detail that NumPy bools can sometimes take values other + # than 0 and 1. See also gh-19514. + nonstandard_bools = np.array([0, 3, -7], dtype=np.int8).view(bool) + res = nonstandard_bools.astype(dtype) + expected = [0, 1, 1] + assert_array_equal(res, expected) + diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_conversion_utils.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_conversion_utils.py new file mode 100644 index 0000000000000000000000000000000000000000..51676320fa0dafcbcf095d7cc02f20e91ac21e16 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_conversion_utils.py @@ -0,0 +1,209 @@ +""" +Tests for numpy/_core/src/multiarray/conversion_utils.c +""" +import re +import sys + +import pytest + +import numpy as np +import numpy._core._multiarray_tests as mt +from numpy._core.multiarray import CLIP, WRAP, RAISE +from numpy.testing import assert_warns, IS_PYPY + + +class StringConverterTestCase: + allow_bytes = True + case_insensitive = True + exact_match = False + warn = True + + def _check_value_error(self, val): + pattern = r'\(got {}\)'.format(re.escape(repr(val))) + with pytest.raises(ValueError, match=pattern) as exc: + self.conv(val) + + def _check_conv_assert_warn(self, val, expected): + if self.warn: + with assert_warns(DeprecationWarning) as exc: + assert self.conv(val) == expected + else: + assert self.conv(val) == expected + + def _check(self, val, expected): + """Takes valid non-deprecated inputs for converters, + runs converters on inputs, checks correctness of outputs, + warnings and errors""" + assert self.conv(val) == expected + + if self.allow_bytes: + assert self.conv(val.encode('ascii')) == expected + else: + with pytest.raises(TypeError): + self.conv(val.encode('ascii')) + + if len(val) != 1: + if self.exact_match: + self._check_value_error(val[:1]) + self._check_value_error(val + '\0') + else: + self._check_conv_assert_warn(val[:1], expected) + + if self.case_insensitive: + if val != val.lower(): + self._check_conv_assert_warn(val.lower(), expected) + if val != val.upper(): + self._check_conv_assert_warn(val.upper(), expected) + else: + if val != val.lower(): + self._check_value_error(val.lower()) + if val != val.upper(): + self._check_value_error(val.upper()) + + def test_wrong_type(self): + # common cases which apply to all the below + with pytest.raises(TypeError): + self.conv({}) + with pytest.raises(TypeError): + self.conv([]) + + def test_wrong_value(self): + # nonsense strings + self._check_value_error('') + self._check_value_error('\N{greek small letter pi}') + + if self.allow_bytes: + self._check_value_error(b'') + # bytes which can't be converted to strings via utf8 + self._check_value_error(b"\xFF") + if self.exact_match: + self._check_value_error("there's no way this is supported") + + +class TestByteorderConverter(StringConverterTestCase): + """ Tests of PyArray_ByteorderConverter """ + conv = mt.run_byteorder_converter + warn = False + + def test_valid(self): + for s in ['big', '>']: + self._check(s, 'NPY_BIG') + for s in ['little', '<']: + self._check(s, 'NPY_LITTLE') + for s in ['native', '=']: + self._check(s, 'NPY_NATIVE') + for s in ['ignore', '|']: + self._check(s, 'NPY_IGNORE') + for s in ['swap']: + self._check(s, 'NPY_SWAP') + + +class TestSortkindConverter(StringConverterTestCase): + """ Tests of PyArray_SortkindConverter """ + conv = mt.run_sortkind_converter + warn = False + + def test_valid(self): + self._check('quicksort', 'NPY_QUICKSORT') + self._check('heapsort', 'NPY_HEAPSORT') + self._check('mergesort', 'NPY_STABLESORT') # alias + self._check('stable', 'NPY_STABLESORT') + + +class TestSelectkindConverter(StringConverterTestCase): + """ Tests of PyArray_SelectkindConverter """ + conv = mt.run_selectkind_converter + case_insensitive = False + exact_match = True + + def test_valid(self): + self._check('introselect', 'NPY_INTROSELECT') + + +class TestSearchsideConverter(StringConverterTestCase): + """ Tests of PyArray_SearchsideConverter """ + conv = mt.run_searchside_converter + def test_valid(self): + self._check('left', 'NPY_SEARCHLEFT') + self._check('right', 'NPY_SEARCHRIGHT') + + +class TestOrderConverter(StringConverterTestCase): + """ Tests of PyArray_OrderConverter """ + conv = mt.run_order_converter + warn = False + + def test_valid(self): + self._check('c', 'NPY_CORDER') + self._check('f', 'NPY_FORTRANORDER') + self._check('a', 'NPY_ANYORDER') + self._check('k', 'NPY_KEEPORDER') + + def test_flatten_invalid_order(self): + # invalid after gh-14596 + with pytest.raises(ValueError): + self.conv('Z') + for order in [False, True, 0, 8]: + with pytest.raises(TypeError): + self.conv(order) + + +class TestClipmodeConverter(StringConverterTestCase): + """ Tests of PyArray_ClipmodeConverter """ + conv = mt.run_clipmode_converter + def test_valid(self): + self._check('clip', 'NPY_CLIP') + self._check('wrap', 'NPY_WRAP') + self._check('raise', 'NPY_RAISE') + + # integer values allowed here + assert self.conv(CLIP) == 'NPY_CLIP' + assert self.conv(WRAP) == 'NPY_WRAP' + assert self.conv(RAISE) == 'NPY_RAISE' + + +class TestCastingConverter(StringConverterTestCase): + """ Tests of PyArray_CastingConverter """ + conv = mt.run_casting_converter + case_insensitive = False + exact_match = True + + def test_valid(self): + self._check("no", "NPY_NO_CASTING") + self._check("equiv", "NPY_EQUIV_CASTING") + self._check("safe", "NPY_SAFE_CASTING") + self._check("same_kind", "NPY_SAME_KIND_CASTING") + self._check("unsafe", "NPY_UNSAFE_CASTING") + + +class TestIntpConverter: + """ Tests of PyArray_IntpConverter """ + conv = mt.run_intp_converter + + def test_basic(self): + assert self.conv(1) == (1,) + assert self.conv((1, 2)) == (1, 2) + assert self.conv([1, 2]) == (1, 2) + assert self.conv(()) == () + + def test_none(self): + # once the warning expires, this will raise TypeError + with pytest.warns(DeprecationWarning): + assert self.conv(None) == () + + @pytest.mark.skipif(IS_PYPY and sys.implementation.version <= (7, 3, 8), + reason="PyPy bug in error formatting") + def test_float(self): + with pytest.raises(TypeError): + self.conv(1.0) + with pytest.raises(TypeError): + self.conv([1, 1.0]) + + def test_too_large(self): + with pytest.raises(ValueError): + self.conv(2**64) + + def test_too_many_dims(self): + assert self.conv([1]*64) == (1,)*64 + with pytest.raises(ValueError): + self.conv([1]*65) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_cpu_dispatcher.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_cpu_dispatcher.py new file mode 100644 index 0000000000000000000000000000000000000000..959725ea7bc865de7532f9fc4378c73d222b2039 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_cpu_dispatcher.py @@ -0,0 +1,45 @@ +from numpy._core._multiarray_umath import ( + __cpu_features__, __cpu_baseline__, __cpu_dispatch__ +) +from numpy._core import _umath_tests +from numpy.testing import assert_equal + +def test_dispatcher(): + """ + Testing the utilities of the CPU dispatcher + """ + targets = ( + "SSE2", "SSE41", "AVX2", + "VSX", "VSX2", "VSX3", + "NEON", "ASIMD", "ASIMDHP", + "VX", "VXE" + ) + highest_sfx = "" # no suffix for the baseline + all_sfx = [] + for feature in reversed(targets): + # skip baseline features, by the default `CCompilerOpt` do not generate separated objects + # for the baseline, just one object combined all of them via 'baseline' option + # within the configuration statements. + if feature in __cpu_baseline__: + continue + # check compiler and running machine support + if feature not in __cpu_dispatch__ or not __cpu_features__[feature]: + continue + + if not highest_sfx: + highest_sfx = "_" + feature + all_sfx.append("func" + "_" + feature) + + test = _umath_tests.test_dispatch() + assert_equal(test["func"], "func" + highest_sfx) + assert_equal(test["var"], "var" + highest_sfx) + + if highest_sfx: + assert_equal(test["func_xb"], "func" + highest_sfx) + assert_equal(test["var_xb"], "var" + highest_sfx) + else: + assert_equal(test["func_xb"], "nobase") + assert_equal(test["var_xb"], "nobase") + + all_sfx.append("func") # add the baseline + assert_equal(test["all"], all_sfx) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_cpu_features.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_cpu_features.py new file mode 100644 index 0000000000000000000000000000000000000000..9649be2fcc67220219ddb136aea468419f328e53 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_cpu_features.py @@ -0,0 +1,407 @@ +import sys, platform, re, pytest +from numpy._core._multiarray_umath import ( + __cpu_features__, + __cpu_baseline__, + __cpu_dispatch__, +) +import numpy as np +import subprocess +import pathlib +import os +import re + +def assert_features_equal(actual, desired, fname): + __tracebackhide__ = True # Hide traceback for py.test + actual, desired = str(actual), str(desired) + if actual == desired: + return + detected = str(__cpu_features__).replace("'", "") + try: + with open("/proc/cpuinfo") as fd: + cpuinfo = fd.read(2048) + except Exception as err: + cpuinfo = str(err) + + try: + import subprocess + auxv = subprocess.check_output(['/bin/true'], env=dict(LD_SHOW_AUXV="1")) + auxv = auxv.decode() + except Exception as err: + auxv = str(err) + + import textwrap + error_report = textwrap.indent( +""" +########################################### +### Extra debugging information +########################################### +------------------------------------------- +--- NumPy Detections +------------------------------------------- +%s +------------------------------------------- +--- SYS / CPUINFO +------------------------------------------- +%s.... +------------------------------------------- +--- SYS / AUXV +------------------------------------------- +%s +""" % (detected, cpuinfo, auxv), prefix='\r') + + raise AssertionError(( + "Failure Detection\n" + " NAME: '%s'\n" + " ACTUAL: %s\n" + " DESIRED: %s\n" + "%s" + ) % (fname, actual, desired, error_report)) + +def _text_to_list(txt): + out = txt.strip("][\n").replace("'", "").split(', ') + return None if out[0] == "" else out + +class AbstractTest: + features = [] + features_groups = {} + features_map = {} + features_flags = set() + + def load_flags(self): + # a hook + pass + def test_features(self): + self.load_flags() + for gname, features in self.features_groups.items(): + test_features = [self.cpu_have(f) for f in features] + assert_features_equal(__cpu_features__.get(gname), all(test_features), gname) + + for feature_name in self.features: + cpu_have = self.cpu_have(feature_name) + npy_have = __cpu_features__.get(feature_name) + assert_features_equal(npy_have, cpu_have, feature_name) + + def cpu_have(self, feature_name): + map_names = self.features_map.get(feature_name, feature_name) + if isinstance(map_names, str): + return map_names in self.features_flags + for f in map_names: + if f in self.features_flags: + return True + return False + + def load_flags_cpuinfo(self, magic_key): + self.features_flags = self.get_cpuinfo_item(magic_key) + + def get_cpuinfo_item(self, magic_key): + values = set() + with open('/proc/cpuinfo') as fd: + for line in fd: + if not line.startswith(magic_key): + continue + flags_value = [s.strip() for s in line.split(':', 1)] + if len(flags_value) == 2: + values = values.union(flags_value[1].upper().split()) + return values + + def load_flags_auxv(self): + auxv = subprocess.check_output(['/bin/true'], env=dict(LD_SHOW_AUXV="1")) + for at in auxv.split(b'\n'): + if not at.startswith(b"AT_HWCAP"): + continue + hwcap_value = [s.strip() for s in at.split(b':', 1)] + if len(hwcap_value) == 2: + self.features_flags = self.features_flags.union( + hwcap_value[1].upper().decode().split() + ) + +@pytest.mark.skipif( + sys.platform == 'emscripten', + reason= ( + "The subprocess module is not available on WASM platforms and" + " therefore this test class cannot be properly executed." + ), +) +class TestEnvPrivation: + cwd = pathlib.Path(__file__).parent.resolve() + env = os.environ.copy() + _enable = os.environ.pop('NPY_ENABLE_CPU_FEATURES', None) + _disable = os.environ.pop('NPY_DISABLE_CPU_FEATURES', None) + SUBPROCESS_ARGS = dict(cwd=cwd, capture_output=True, text=True, check=True) + unavailable_feats = [ + feat for feat in __cpu_dispatch__ if not __cpu_features__[feat] + ] + UNAVAILABLE_FEAT = ( + None if len(unavailable_feats) == 0 + else unavailable_feats[0] + ) + BASELINE_FEAT = None if len(__cpu_baseline__) == 0 else __cpu_baseline__[0] + SCRIPT = """ +def main(): + from numpy._core._multiarray_umath import ( + __cpu_features__, + __cpu_dispatch__ + ) + + detected = [feat for feat in __cpu_dispatch__ if __cpu_features__[feat]] + print(detected) + +if __name__ == "__main__": + main() + """ + + @pytest.fixture(autouse=True) + def setup_class(self, tmp_path_factory): + file = tmp_path_factory.mktemp("runtime_test_script") + file /= "_runtime_detect.py" + file.write_text(self.SCRIPT) + self.file = file + return + + def _run(self): + return subprocess.run( + [sys.executable, self.file], + env=self.env, + **self.SUBPROCESS_ARGS, + ) + + # Helper function mimicking pytest.raises for subprocess call + def _expect_error( + self, + msg, + err_type, + no_error_msg="Failed to generate error" + ): + try: + self._run() + except subprocess.CalledProcessError as e: + assertion_message = f"Expected: {msg}\nGot: {e.stderr}" + assert re.search(msg, e.stderr), assertion_message + + assertion_message = ( + f"Expected error of type: {err_type}; see full " + f"error:\n{e.stderr}" + ) + assert re.search(err_type, e.stderr), assertion_message + else: + assert False, no_error_msg + + def setup_method(self): + """Ensure that the environment is reset""" + self.env = os.environ.copy() + return + + def test_runtime_feature_selection(self): + """ + Ensure that when selecting `NPY_ENABLE_CPU_FEATURES`, only the + features exactly specified are dispatched. + """ + + # Capture runtime-enabled features + out = self._run() + non_baseline_features = _text_to_list(out.stdout) + + if non_baseline_features is None: + pytest.skip( + "No dispatchable features outside of baseline detected." + ) + feature = non_baseline_features[0] + + # Capture runtime-enabled features when `NPY_ENABLE_CPU_FEATURES` is + # specified + self.env['NPY_ENABLE_CPU_FEATURES'] = feature + out = self._run() + enabled_features = _text_to_list(out.stdout) + + # Ensure that only one feature is enabled, and it is exactly the one + # specified by `NPY_ENABLE_CPU_FEATURES` + assert set(enabled_features) == {feature} + + if len(non_baseline_features) < 2: + pytest.skip("Only one non-baseline feature detected.") + # Capture runtime-enabled features when `NPY_ENABLE_CPU_FEATURES` is + # specified + self.env['NPY_ENABLE_CPU_FEATURES'] = ",".join(non_baseline_features) + out = self._run() + enabled_features = _text_to_list(out.stdout) + + # Ensure that both features are enabled, and they are exactly the ones + # specified by `NPY_ENABLE_CPU_FEATURES` + assert set(enabled_features) == set(non_baseline_features) + return + + @pytest.mark.parametrize("enabled, disabled", + [ + ("feature", "feature"), + ("feature", "same"), + ]) + def test_both_enable_disable_set(self, enabled, disabled): + """ + Ensure that when both environment variables are set then an + ImportError is thrown + """ + self.env['NPY_ENABLE_CPU_FEATURES'] = enabled + self.env['NPY_DISABLE_CPU_FEATURES'] = disabled + msg = "Both NPY_DISABLE_CPU_FEATURES and NPY_ENABLE_CPU_FEATURES" + err_type = "ImportError" + self._expect_error(msg, err_type) + + @pytest.mark.skipif( + not __cpu_dispatch__, + reason=( + "NPY_*_CPU_FEATURES only parsed if " + "`__cpu_dispatch__` is non-empty" + ) + ) + @pytest.mark.parametrize("action", ["ENABLE", "DISABLE"]) + def test_variable_too_long(self, action): + """ + Test that an error is thrown if the environment variables are too long + to be processed. Current limit is 1024, but this may change later. + """ + MAX_VAR_LENGTH = 1024 + # Actual length is MAX_VAR_LENGTH + 1 due to null-termination + self.env[f'NPY_{action}_CPU_FEATURES'] = "t" * MAX_VAR_LENGTH + msg = ( + f"Length of environment variable 'NPY_{action}_CPU_FEATURES' is " + f"{MAX_VAR_LENGTH + 1}, only {MAX_VAR_LENGTH} accepted" + ) + err_type = "RuntimeError" + self._expect_error(msg, err_type) + + @pytest.mark.skipif( + not __cpu_dispatch__, + reason=( + "NPY_*_CPU_FEATURES only parsed if " + "`__cpu_dispatch__` is non-empty" + ) + ) + def test_impossible_feature_disable(self): + """ + Test that a RuntimeError is thrown if an impossible feature-disabling + request is made. This includes disabling a baseline feature. + """ + + if self.BASELINE_FEAT is None: + pytest.skip("There are no unavailable features to test with") + bad_feature = self.BASELINE_FEAT + self.env['NPY_DISABLE_CPU_FEATURES'] = bad_feature + msg = ( + f"You cannot disable CPU feature '{bad_feature}', since it is " + "part of the baseline optimizations" + ) + err_type = "RuntimeError" + self._expect_error(msg, err_type) + + def test_impossible_feature_enable(self): + """ + Test that a RuntimeError is thrown if an impossible feature-enabling + request is made. This includes enabling a feature not supported by the + machine, or disabling a baseline optimization. + """ + + if self.UNAVAILABLE_FEAT is None: + pytest.skip("There are no unavailable features to test with") + bad_feature = self.UNAVAILABLE_FEAT + self.env['NPY_ENABLE_CPU_FEATURES'] = bad_feature + msg = ( + f"You cannot enable CPU features \\({bad_feature}\\), since " + "they are not supported by your machine." + ) + err_type = "RuntimeError" + self._expect_error(msg, err_type) + + # Ensure that only the bad feature gets reported + feats = f"{bad_feature}, {self.BASELINE_FEAT}" + self.env['NPY_ENABLE_CPU_FEATURES'] = feats + msg = ( + f"You cannot enable CPU features \\({bad_feature}\\), since they " + "are not supported by your machine." + ) + self._expect_error(msg, err_type) + +is_linux = sys.platform.startswith('linux') +is_cygwin = sys.platform.startswith('cygwin') +machine = platform.machine() +is_x86 = re.match("^(amd64|x86|i386|i686)", machine, re.IGNORECASE) +@pytest.mark.skipif( + not (is_linux or is_cygwin) or not is_x86, reason="Only for Linux and x86" +) +class Test_X86_Features(AbstractTest): + features = [ + "MMX", "SSE", "SSE2", "SSE3", "SSSE3", "SSE41", "POPCNT", "SSE42", + "AVX", "F16C", "XOP", "FMA4", "FMA3", "AVX2", "AVX512F", "AVX512CD", + "AVX512ER", "AVX512PF", "AVX5124FMAPS", "AVX5124VNNIW", "AVX512VPOPCNTDQ", + "AVX512VL", "AVX512BW", "AVX512DQ", "AVX512VNNI", "AVX512IFMA", + "AVX512VBMI", "AVX512VBMI2", "AVX512BITALG", "AVX512FP16", + ] + features_groups = dict( + AVX512_KNL = ["AVX512F", "AVX512CD", "AVX512ER", "AVX512PF"], + AVX512_KNM = ["AVX512F", "AVX512CD", "AVX512ER", "AVX512PF", "AVX5124FMAPS", + "AVX5124VNNIW", "AVX512VPOPCNTDQ"], + AVX512_SKX = ["AVX512F", "AVX512CD", "AVX512BW", "AVX512DQ", "AVX512VL"], + AVX512_CLX = ["AVX512F", "AVX512CD", "AVX512BW", "AVX512DQ", "AVX512VL", "AVX512VNNI"], + AVX512_CNL = ["AVX512F", "AVX512CD", "AVX512BW", "AVX512DQ", "AVX512VL", "AVX512IFMA", + "AVX512VBMI"], + AVX512_ICL = ["AVX512F", "AVX512CD", "AVX512BW", "AVX512DQ", "AVX512VL", "AVX512IFMA", + "AVX512VBMI", "AVX512VNNI", "AVX512VBMI2", "AVX512BITALG", "AVX512VPOPCNTDQ"], + AVX512_SPR = ["AVX512F", "AVX512CD", "AVX512BW", "AVX512DQ", + "AVX512VL", "AVX512IFMA", "AVX512VBMI", "AVX512VNNI", + "AVX512VBMI2", "AVX512BITALG", "AVX512VPOPCNTDQ", + "AVX512FP16"], + ) + features_map = dict( + SSE3="PNI", SSE41="SSE4_1", SSE42="SSE4_2", FMA3="FMA", + AVX512VNNI="AVX512_VNNI", AVX512BITALG="AVX512_BITALG", AVX512VBMI2="AVX512_VBMI2", + AVX5124FMAPS="AVX512_4FMAPS", AVX5124VNNIW="AVX512_4VNNIW", AVX512VPOPCNTDQ="AVX512_VPOPCNTDQ", + AVX512FP16="AVX512_FP16", + ) + def load_flags(self): + self.load_flags_cpuinfo("flags") + +is_power = re.match("^(powerpc|ppc)64", machine, re.IGNORECASE) +@pytest.mark.skipif(not is_linux or not is_power, reason="Only for Linux and Power") +class Test_POWER_Features(AbstractTest): + features = ["VSX", "VSX2", "VSX3", "VSX4"] + features_map = dict(VSX2="ARCH_2_07", VSX3="ARCH_3_00", VSX4="ARCH_3_1") + + def load_flags(self): + self.load_flags_auxv() + + +is_zarch = re.match("^(s390x)", machine, re.IGNORECASE) +@pytest.mark.skipif(not is_linux or not is_zarch, + reason="Only for Linux and IBM Z") +class Test_ZARCH_Features(AbstractTest): + features = ["VX", "VXE", "VXE2"] + + def load_flags(self): + self.load_flags_auxv() + + +is_arm = re.match("^(arm|aarch64)", machine, re.IGNORECASE) +@pytest.mark.skipif(not is_linux or not is_arm, reason="Only for Linux and ARM") +class Test_ARM_Features(AbstractTest): + features = [ + "SVE", "NEON", "ASIMD", "FPHP", "ASIMDHP", "ASIMDDP", "ASIMDFHM" + ] + features_groups = dict( + NEON_FP16 = ["NEON", "HALF"], + NEON_VFPV4 = ["NEON", "VFPV4"], + ) + def load_flags(self): + self.load_flags_cpuinfo("Features") + arch = self.get_cpuinfo_item("CPU architecture") + # in case of mounting virtual filesystem of aarch64 kernel + is_rootfs_v8 = int('0'+next(iter(arch))) > 7 if arch else 0 + if re.match("^(aarch64|AARCH64)", machine) or is_rootfs_v8: + self.features_map = dict( + NEON="ASIMD", HALF="ASIMD", VFPV4="ASIMD" + ) + else: + self.features_map = dict( + # ELF auxiliary vector and /proc/cpuinfo on Linux kernel(armv8 aarch32) + # doesn't provide information about ASIMD, so we assume that ASIMD is supported + # if the kernel reports any one of the following ARM8 features. + ASIMD=("AES", "SHA1", "SHA2", "PMULL", "CRC32") + ) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_custom_dtypes.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_custom_dtypes.py new file mode 100644 index 0000000000000000000000000000000000000000..e8acb450516be2c1090f292c5b371e081a0e8de6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_custom_dtypes.py @@ -0,0 +1,312 @@ +import sys +from tempfile import NamedTemporaryFile + +import pytest + +import numpy as np +from numpy.testing import assert_array_equal +from numpy._core._multiarray_umath import ( + _discover_array_parameters as discover_array_params, _get_sfloat_dtype) + + +SF = _get_sfloat_dtype() + + +class TestSFloat: + def _get_array(self, scaling, aligned=True): + if not aligned: + a = np.empty(3*8 + 1, dtype=np.uint8)[1:] + a = a.view(np.float64) + a[:] = [1., 2., 3.] + else: + a = np.array([1., 2., 3.]) + + a *= 1./scaling # the casting code also uses the reciprocal. + return a.view(SF(scaling)) + + def test_sfloat_rescaled(self): + sf = SF(1.) + sf2 = sf.scaled_by(2.) + assert sf2.get_scaling() == 2. + sf6 = sf2.scaled_by(3.) + assert sf6.get_scaling() == 6. + + def test_class_discovery(self): + # This does not test much, since we always discover the scaling as 1. + # But most of NumPy (when writing) does not understand DType classes + dt, _ = discover_array_params([1., 2., 3.], dtype=SF) + assert dt == SF(1.) + + @pytest.mark.parametrize("scaling", [1., -1., 2.]) + def test_scaled_float_from_floats(self, scaling): + a = np.array([1., 2., 3.], dtype=SF(scaling)) + + assert a.dtype.get_scaling() == scaling + assert_array_equal(scaling * a.view(np.float64), [1., 2., 3.]) + + def test_repr(self): + # Check the repr, mainly to cover the code paths: + assert repr(SF(scaling=1.)) == "_ScaledFloatTestDType(scaling=1.0)" + + def test_dtype_name(self): + assert SF(1.).name == "_ScaledFloatTestDType64" + + def test_sfloat_structured_dtype_printing(self): + dt = np.dtype([("id", int), ("value", SF(0.5))]) + # repr of structured dtypes need special handling because the + # implementation bypasses the object repr + assert "('value', '_ScaledFloatTestDType64')" in repr(dt) + + @pytest.mark.parametrize("scaling", [1., -1., 2.]) + def test_sfloat_from_float(self, scaling): + a = np.array([1., 2., 3.]).astype(dtype=SF(scaling)) + + assert a.dtype.get_scaling() == scaling + assert_array_equal(scaling * a.view(np.float64), [1., 2., 3.]) + + @pytest.mark.parametrize("aligned", [True, False]) + @pytest.mark.parametrize("scaling", [1., -1., 2.]) + def test_sfloat_getitem(self, aligned, scaling): + a = self._get_array(1., aligned) + assert a.tolist() == [1., 2., 3.] + + @pytest.mark.parametrize("aligned", [True, False]) + def test_sfloat_casts(self, aligned): + a = self._get_array(1., aligned) + + assert np.can_cast(a, SF(-1.), casting="equiv") + assert not np.can_cast(a, SF(-1.), casting="no") + na = a.astype(SF(-1.)) + assert_array_equal(-1 * na.view(np.float64), a.view(np.float64)) + + assert np.can_cast(a, SF(2.), casting="same_kind") + assert not np.can_cast(a, SF(2.), casting="safe") + a2 = a.astype(SF(2.)) + assert_array_equal(2 * a2.view(np.float64), a.view(np.float64)) + + @pytest.mark.parametrize("aligned", [True, False]) + def test_sfloat_cast_internal_errors(self, aligned): + a = self._get_array(2e300, aligned) + + with pytest.raises(TypeError, + match="error raised inside the core-loop: non-finite factor!"): + a.astype(SF(2e-300)) + + def test_sfloat_promotion(self): + assert np.result_type(SF(2.), SF(3.)) == SF(3.) + assert np.result_type(SF(3.), SF(2.)) == SF(3.) + # Float64 -> SF(1.) and then promotes normally, so both of this work: + assert np.result_type(SF(3.), np.float64) == SF(3.) + assert np.result_type(np.float64, SF(0.5)) == SF(1.) + + # Test an undefined promotion: + with pytest.raises(TypeError): + np.result_type(SF(1.), np.int64) + + def test_basic_multiply(self): + a = self._get_array(2.) + b = self._get_array(4.) + + res = a * b + # multiplies dtype scaling and content separately: + assert res.dtype.get_scaling() == 8. + expected_view = a.view(np.float64) * b.view(np.float64) + assert_array_equal(res.view(np.float64), expected_view) + + def test_possible_and_impossible_reduce(self): + # For reductions to work, the first and last operand must have the + # same dtype. For this parametric DType that is not necessarily true. + a = self._get_array(2.) + # Addition reductin works (as of writing requires to pass initial + # because setting a scaled-float from the default `0` fails). + res = np.add.reduce(a, initial=0.) + assert res == a.astype(np.float64).sum() + + # But each multiplication changes the factor, so a reduction is not + # possible (the relaxed version of the old refusal to handle any + # flexible dtype). + with pytest.raises(TypeError, + match="the resolved dtypes are not compatible"): + np.multiply.reduce(a) + + def test_basic_ufunc_at(self): + float_a = np.array([1., 2., 3.]) + b = self._get_array(2.) + + float_b = b.view(np.float64).copy() + np.multiply.at(float_b, [1, 1, 1], float_a) + np.multiply.at(b, [1, 1, 1], float_a) + + assert_array_equal(b.view(np.float64), float_b) + + def test_basic_multiply_promotion(self): + float_a = np.array([1., 2., 3.]) + b = self._get_array(2.) + + res1 = float_a * b + res2 = b * float_a + + # one factor is one, so we get the factor of b: + assert res1.dtype == res2.dtype == b.dtype + expected_view = float_a * b.view(np.float64) + assert_array_equal(res1.view(np.float64), expected_view) + assert_array_equal(res2.view(np.float64), expected_view) + + # Check that promotion works when `out` is used: + np.multiply(b, float_a, out=res2) + with pytest.raises(TypeError): + # The promoter accepts this (maybe it should not), but the SFloat + # result cannot be cast to integer: + np.multiply(b, float_a, out=np.arange(3)) + + def test_basic_addition(self): + a = self._get_array(2.) + b = self._get_array(4.) + + res = a + b + # addition uses the type promotion rules for the result: + assert res.dtype == np.result_type(a.dtype, b.dtype) + expected_view = (a.astype(res.dtype).view(np.float64) + + b.astype(res.dtype).view(np.float64)) + assert_array_equal(res.view(np.float64), expected_view) + + def test_addition_cast_safety(self): + """The addition method is special for the scaled float, because it + includes the "cast" between different factors, thus cast-safety + is influenced by the implementation. + """ + a = self._get_array(2.) + b = self._get_array(-2.) + c = self._get_array(3.) + + # sign change is "equiv": + np.add(a, b, casting="equiv") + with pytest.raises(TypeError): + np.add(a, b, casting="no") + + # Different factor is "same_kind" (default) so check that "safe" fails + with pytest.raises(TypeError): + np.add(a, c, casting="safe") + + # Check that casting the output fails also (done by the ufunc here) + with pytest.raises(TypeError): + np.add(a, a, out=c, casting="safe") + + @pytest.mark.parametrize("ufunc", + [np.logical_and, np.logical_or, np.logical_xor]) + def test_logical_ufuncs_casts_to_bool(self, ufunc): + a = self._get_array(2.) + a[0] = 0. # make sure first element is considered False. + + float_equiv = a.astype(float) + expected = ufunc(float_equiv, float_equiv) + res = ufunc(a, a) + assert_array_equal(res, expected) + + # also check that the same works for reductions: + expected = ufunc.reduce(float_equiv) + res = ufunc.reduce(a) + assert_array_equal(res, expected) + + # The output casting does not match the bool, bool -> bool loop: + with pytest.raises(TypeError): + ufunc(a, a, out=np.empty(a.shape, dtype=int), casting="equiv") + + def test_wrapped_and_wrapped_reductions(self): + a = self._get_array(2.) + float_equiv = a.astype(float) + + expected = np.hypot(float_equiv, float_equiv) + res = np.hypot(a, a) + assert res.dtype == a.dtype + res_float = res.view(np.float64) * 2 + assert_array_equal(res_float, expected) + + # Also check reduction (keepdims, due to incorrect getitem) + res = np.hypot.reduce(a, keepdims=True) + assert res.dtype == a.dtype + expected = np.hypot.reduce(float_equiv, keepdims=True) + assert res.view(np.float64) * 2 == expected + + def test_astype_class(self): + # Very simple test that we accept `.astype()` also on the class. + # ScaledFloat always returns the default descriptor, but it does + # check the relevant code paths. + arr = np.array([1., 2., 3.], dtype=object) + + res = arr.astype(SF) # passing the class class + expected = arr.astype(SF(1.)) # above will have discovered 1. scaling + assert_array_equal(res.view(np.float64), expected.view(np.float64)) + + def test_creation_class(self): + # passing in a dtype class should return + # the default descriptor + arr1 = np.array([1., 2., 3.], dtype=SF) + assert arr1.dtype == SF(1.) + arr2 = np.array([1., 2., 3.], dtype=SF(1.)) + assert_array_equal(arr1.view(np.float64), arr2.view(np.float64)) + assert arr1.dtype == arr2.dtype + + assert np.empty(3, dtype=SF).dtype == SF(1.) + assert np.empty_like(arr1, dtype=SF).dtype == SF(1.) + assert np.zeros(3, dtype=SF).dtype == SF(1.) + assert np.zeros_like(arr1, dtype=SF).dtype == SF(1.) + + def test_np_save_load(self): + # this monkeypatch is needed because pickle + # uses the repr of a type to reconstruct it + np._ScaledFloatTestDType = SF + + arr = np.array([1.0, 2.0, 3.0], dtype=SF(1.0)) + + # adapted from RoundtripTest.roundtrip in np.save tests + with NamedTemporaryFile("wb", delete=False, suffix=".npz") as f: + with pytest.warns(UserWarning) as record: + np.savez(f.name, arr) + + assert len(record) == 1 + + with np.load(f.name, allow_pickle=True) as data: + larr = data["arr_0"] + assert_array_equal(arr.view(np.float64), larr.view(np.float64)) + assert larr.dtype == arr.dtype == SF(1.0) + + del np._ScaledFloatTestDType + + def test_flatiter(self): + arr = np.array([1.0, 2.0, 3.0], dtype=SF(1.0)) + + for i, val in enumerate(arr.flat): + assert arr[i] == val + + @pytest.mark.parametrize( + "index", [ + [1, 2], ..., slice(None, 2, None), + np.array([True, True, False]), np.array([0, 1]) + ], ids=["int_list", "ellipsis", "slice", "bool_array", "int_array"]) + def test_flatiter_index(self, index): + arr = np.array([1.0, 2.0, 3.0], dtype=SF(1.0)) + np.testing.assert_array_equal( + arr[index].view(np.float64), arr.flat[index].view(np.float64)) + + arr2 = arr.copy() + arr[index] = 5.0 + arr2.flat[index] = 5.0 + np.testing.assert_array_equal( + arr.view(np.float64), arr2.view(np.float64)) + +def test_type_pickle(): + # can't actually unpickle, but we can pickle (if in namespace) + import pickle + + np._ScaledFloatTestDType = SF + + s = pickle.dumps(SF) + res = pickle.loads(s) + assert res is SF + + del np._ScaledFloatTestDType + + +def test_is_numeric(): + assert SF._is_numeric diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_cython.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_cython.py new file mode 100644 index 0000000000000000000000000000000000000000..1a82a99b6c768b90e78877c8c48e65f50b2afd5e --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_cython.py @@ -0,0 +1,295 @@ +from datetime import datetime +import os +import shutil +import subprocess +import sys +import time +import pytest + +import numpy as np +from numpy.testing import assert_array_equal, IS_WASM + +# This import is copied from random.tests.test_extending +try: + import cython + from Cython.Compiler.Version import version as cython_version +except ImportError: + cython = None +else: + from numpy._utils import _pep440 + + # Note: keep in sync with the one in pyproject.toml + required_version = "3.0.6" + if _pep440.parse(cython_version) < _pep440.Version(required_version): + # too old or wrong cython, skip the test + cython = None + +pytestmark = pytest.mark.skipif(cython is None, reason="requires cython") + + +@pytest.fixture(scope='module') +def install_temp(tmpdir_factory): + # Based in part on test_cython from random.tests.test_extending + if IS_WASM: + pytest.skip("No subprocess") + + srcdir = os.path.join(os.path.dirname(__file__), 'examples', 'cython') + build_dir = tmpdir_factory.mktemp("cython_test") / "build" + os.makedirs(build_dir, exist_ok=True) + # Ensure we use the correct Python interpreter even when `meson` is + # installed in a different Python environment (see gh-24956) + native_file = str(build_dir / 'interpreter-native-file.ini') + with open(native_file, 'w') as f: + f.write("[binaries]\n") + f.write(f"python = '{sys.executable}'") + + try: + subprocess.check_call(["meson", "--version"]) + except FileNotFoundError: + pytest.skip("No usable 'meson' found") + if sys.platform == "win32": + subprocess.check_call(["meson", "setup", + "--buildtype=release", + "--vsenv", "--native-file", native_file, + str(srcdir)], + cwd=build_dir, + ) + else: + subprocess.check_call(["meson", "setup", + "--native-file", native_file, str(srcdir)], + cwd=build_dir + ) + try: + subprocess.check_call(["meson", "compile", "-vv"], cwd=build_dir) + except subprocess.CalledProcessError: + print("----------------") + print("meson build failed when doing") + print(f"'meson setup --native-file {native_file} {srcdir}'") + print(f"'meson compile -vv'") + print(f"in {build_dir}") + print("----------------") + raise + + sys.path.append(str(build_dir)) + + +def test_is_timedelta64_object(install_temp): + import checks + + assert checks.is_td64(np.timedelta64(1234)) + assert checks.is_td64(np.timedelta64(1234, "ns")) + assert checks.is_td64(np.timedelta64("NaT", "ns")) + + assert not checks.is_td64(1) + assert not checks.is_td64(None) + assert not checks.is_td64("foo") + assert not checks.is_td64(np.datetime64("now", "s")) + + +def test_is_datetime64_object(install_temp): + import checks + + assert checks.is_dt64(np.datetime64(1234, "ns")) + assert checks.is_dt64(np.datetime64("NaT", "ns")) + + assert not checks.is_dt64(1) + assert not checks.is_dt64(None) + assert not checks.is_dt64("foo") + assert not checks.is_dt64(np.timedelta64(1234)) + + +def test_get_datetime64_value(install_temp): + import checks + + dt64 = np.datetime64("2016-01-01", "ns") + + result = checks.get_dt64_value(dt64) + expected = dt64.view("i8") + + assert result == expected + + +def test_get_timedelta64_value(install_temp): + import checks + + td64 = np.timedelta64(12345, "h") + + result = checks.get_td64_value(td64) + expected = td64.view("i8") + + assert result == expected + + +def test_get_datetime64_unit(install_temp): + import checks + + dt64 = np.datetime64("2016-01-01", "ns") + result = checks.get_dt64_unit(dt64) + expected = 10 + assert result == expected + + td64 = np.timedelta64(12345, "h") + result = checks.get_dt64_unit(td64) + expected = 5 + assert result == expected + + +def test_abstract_scalars(install_temp): + import checks + + assert checks.is_integer(1) + assert checks.is_integer(np.int8(1)) + assert checks.is_integer(np.uint64(1)) + +def test_default_int(install_temp): + import checks + + assert checks.get_default_integer() is np.dtype(int) + + +def test_ravel_axis(install_temp): + import checks + + assert checks.get_ravel_axis() == np.iinfo("intc").min + + +def test_convert_datetime64_to_datetimestruct(install_temp): + # GH#21199 + import checks + + res = checks.convert_datetime64_to_datetimestruct() + + exp = { + "year": 2022, + "month": 3, + "day": 15, + "hour": 20, + "min": 1, + "sec": 55, + "us": 260292, + "ps": 0, + "as": 0, + } + + assert res == exp + + +class TestDatetimeStrings: + def test_make_iso_8601_datetime(self, install_temp): + # GH#21199 + import checks + dt = datetime(2016, 6, 2, 10, 45, 19) + # uses NPY_FR_s + result = checks.make_iso_8601_datetime(dt) + assert result == b"2016-06-02T10:45:19" + + def test_get_datetime_iso_8601_strlen(self, install_temp): + # GH#21199 + import checks + # uses NPY_FR_ns + res = checks.get_datetime_iso_8601_strlen() + assert res == 48 + + +@pytest.mark.parametrize( + "arrays", + [ + [np.random.rand(2)], + [np.random.rand(2), np.random.rand(3, 1)], + [np.random.rand(2), np.random.rand(2, 3, 2), np.random.rand(1, 3, 2)], + [np.random.rand(2, 1)] * 4 + [np.random.rand(1, 1, 1)], + ] +) +def test_multiiter_fields(install_temp, arrays): + import checks + bcast = np.broadcast(*arrays) + + assert bcast.ndim == checks.get_multiiter_number_of_dims(bcast) + assert bcast.size == checks.get_multiiter_size(bcast) + assert bcast.numiter == checks.get_multiiter_num_of_iterators(bcast) + assert bcast.shape == checks.get_multiiter_shape(bcast) + assert bcast.index == checks.get_multiiter_current_index(bcast) + assert all( + [ + x.base is y.base + for x, y in zip(bcast.iters, checks.get_multiiter_iters(bcast)) + ] + ) + + +def test_dtype_flags(install_temp): + import checks + dtype = np.dtype("i,O") # dtype with somewhat interesting flags + assert dtype.flags == checks.get_dtype_flags(dtype) + + +def test_conv_intp(install_temp): + import checks + + class myint: + def __int__(self): + return 3 + + # These conversion passes via `__int__`, not `__index__`: + assert checks.conv_intp(3.) == 3 + assert checks.conv_intp(myint()) == 3 + + +def test_npyiter_api(install_temp): + import checks + arr = np.random.rand(3, 2) + + it = np.nditer(arr) + assert checks.get_npyiter_size(it) == it.itersize == np.prod(arr.shape) + assert checks.get_npyiter_ndim(it) == it.ndim == 1 + assert checks.npyiter_has_index(it) == it.has_index == False + + it = np.nditer(arr, flags=["c_index"]) + assert checks.npyiter_has_index(it) == it.has_index == True + assert ( + checks.npyiter_has_delayed_bufalloc(it) + == it.has_delayed_bufalloc + == False + ) + + it = np.nditer(arr, flags=["buffered", "delay_bufalloc"]) + assert ( + checks.npyiter_has_delayed_bufalloc(it) + == it.has_delayed_bufalloc + == True + ) + + it = np.nditer(arr, flags=["multi_index"]) + assert checks.get_npyiter_size(it) == it.itersize == np.prod(arr.shape) + assert checks.npyiter_has_multi_index(it) == it.has_multi_index == True + assert checks.get_npyiter_ndim(it) == it.ndim == 2 + + arr2 = np.random.rand(2, 1, 2) + it = np.nditer([arr, arr2]) + assert checks.get_npyiter_nop(it) == it.nop == 2 + assert checks.get_npyiter_size(it) == it.itersize == 12 + assert checks.get_npyiter_ndim(it) == it.ndim == 3 + assert all( + x is y for x, y in zip(checks.get_npyiter_operands(it), it.operands) + ) + assert all( + [ + np.allclose(x, y) + for x, y in zip(checks.get_npyiter_itviews(it), it.itviews) + ] + ) + + +def test_fillwithbytes(install_temp): + import checks + + arr = checks.compile_fillwithbyte() + assert_array_equal(arr, np.ones((1, 2))) + + +def test_complex(install_temp): + from checks import inc2_cfloat_struct + + arr = np.array([0, 10+10j], dtype="F") + inc2_cfloat_struct(arr) + assert arr[1] == (12 + 12j) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_datetime.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_datetime.py new file mode 100644 index 0000000000000000000000000000000000000000..70a294796a0dc867fbd90a44ef08f48e7a255ce7 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_datetime.py @@ -0,0 +1,2596 @@ +import datetime +import pickle + +import pytest + +import numpy +import numpy as np +from numpy.testing import ( + IS_WASM, + assert_, assert_equal, assert_raises, assert_warns, suppress_warnings, + assert_raises_regex, assert_array_equal, + ) + +# Use pytz to test out various time zones if available +try: + from pytz import timezone as tz + _has_pytz = True +except ImportError: + _has_pytz = False + +try: + RecursionError +except NameError: + RecursionError = RuntimeError # python < 3.5 + + +class TestDateTime: + + def test_string(self): + msg = "no explicit representation of timezones available for " \ + "np.datetime64" + with pytest.warns(UserWarning, match=msg): + np.datetime64('2000-01-01T00+01') + + def test_datetime(self): + msg = "no explicit representation of timezones available for " \ + "np.datetime64" + with pytest.warns(UserWarning, match=msg): + t0 = np.datetime64('2023-06-09T12:18:40Z', 'ns') + + t0 = np.datetime64('2023-06-09T12:18:40', 'ns') + + def test_datetime_dtype_creation(self): + for unit in ['Y', 'M', 'W', 'D', + 'h', 'm', 's', 'ms', 'us', + 'μs', # alias for us + 'ns', 'ps', 'fs', 'as']: + dt1 = np.dtype('M8[750%s]' % unit) + assert_(dt1 == np.dtype('datetime64[750%s]' % unit)) + dt2 = np.dtype('m8[%s]' % unit) + assert_(dt2 == np.dtype('timedelta64[%s]' % unit)) + + # Generic units shouldn't add [] to the end + assert_equal(str(np.dtype("M8")), "datetime64") + + # Should be possible to specify the endianness + assert_equal(np.dtype("=M8"), np.dtype("M8")) + assert_equal(np.dtype("=M8[s]"), np.dtype("M8[s]")) + assert_(np.dtype(">M8") == np.dtype("M8") or + np.dtype("M8[D]") == np.dtype("M8[D]") or + np.dtype("M8") != np.dtype("m8") == np.dtype("m8") or + np.dtype("m8[D]") == np.dtype("m8[D]") or + np.dtype("m8") != np.dtype(" Scalars + assert_equal(np.datetime64(b, '[s]'), np.datetime64('NaT', '[s]')) + assert_equal(np.datetime64(b, '[ms]'), np.datetime64('NaT', '[ms]')) + assert_equal(np.datetime64(b, '[M]'), np.datetime64('NaT', '[M]')) + assert_equal(np.datetime64(b, '[Y]'), np.datetime64('NaT', '[Y]')) + assert_equal(np.datetime64(b, '[W]'), np.datetime64('NaT', '[W]')) + + # Arrays -> Scalars + assert_equal(np.datetime64(a, '[s]'), np.datetime64('NaT', '[s]')) + assert_equal(np.datetime64(a, '[ms]'), np.datetime64('NaT', '[ms]')) + assert_equal(np.datetime64(a, '[M]'), np.datetime64('NaT', '[M]')) + assert_equal(np.datetime64(a, '[Y]'), np.datetime64('NaT', '[Y]')) + assert_equal(np.datetime64(a, '[W]'), np.datetime64('NaT', '[W]')) + + # NaN -> NaT + nan = np.array([np.nan] * 8 + [0]) + fnan = nan.astype('f') + lnan = nan.astype('g') + cnan = nan.astype('D') + cfnan = nan.astype('F') + clnan = nan.astype('G') + hnan = nan.astype(np.half) + + nat = np.array([np.datetime64('NaT')] * 8 + [np.datetime64(0, 'D')]) + assert_equal(nan.astype('M8[ns]'), nat) + assert_equal(fnan.astype('M8[ns]'), nat) + assert_equal(lnan.astype('M8[ns]'), nat) + assert_equal(cnan.astype('M8[ns]'), nat) + assert_equal(cfnan.astype('M8[ns]'), nat) + assert_equal(clnan.astype('M8[ns]'), nat) + assert_equal(hnan.astype('M8[ns]'), nat) + + nat = np.array([np.timedelta64('NaT')] * 8 + [np.timedelta64(0)]) + assert_equal(nan.astype('timedelta64[ns]'), nat) + assert_equal(fnan.astype('timedelta64[ns]'), nat) + assert_equal(lnan.astype('timedelta64[ns]'), nat) + assert_equal(cnan.astype('timedelta64[ns]'), nat) + assert_equal(cfnan.astype('timedelta64[ns]'), nat) + assert_equal(clnan.astype('timedelta64[ns]'), nat) + assert_equal(hnan.astype('timedelta64[ns]'), nat) + + def test_days_creation(self): + assert_equal(np.array('1599', dtype='M8[D]').astype('i8'), + (1600-1970)*365 - (1972-1600)/4 + 3 - 365) + assert_equal(np.array('1600', dtype='M8[D]').astype('i8'), + (1600-1970)*365 - (1972-1600)/4 + 3) + assert_equal(np.array('1601', dtype='M8[D]').astype('i8'), + (1600-1970)*365 - (1972-1600)/4 + 3 + 366) + assert_equal(np.array('1900', dtype='M8[D]').astype('i8'), + (1900-1970)*365 - (1970-1900)//4) + assert_equal(np.array('1901', dtype='M8[D]').astype('i8'), + (1900-1970)*365 - (1970-1900)//4 + 365) + assert_equal(np.array('1967', dtype='M8[D]').astype('i8'), -3*365 - 1) + assert_equal(np.array('1968', dtype='M8[D]').astype('i8'), -2*365 - 1) + assert_equal(np.array('1969', dtype='M8[D]').astype('i8'), -1*365) + assert_equal(np.array('1970', dtype='M8[D]').astype('i8'), 0*365) + assert_equal(np.array('1971', dtype='M8[D]').astype('i8'), 1*365) + assert_equal(np.array('1972', dtype='M8[D]').astype('i8'), 2*365) + assert_equal(np.array('1973', dtype='M8[D]').astype('i8'), 3*365 + 1) + assert_equal(np.array('1974', dtype='M8[D]').astype('i8'), 4*365 + 1) + assert_equal(np.array('2000', dtype='M8[D]').astype('i8'), + (2000 - 1970)*365 + (2000 - 1972)//4) + assert_equal(np.array('2001', dtype='M8[D]').astype('i8'), + (2000 - 1970)*365 + (2000 - 1972)//4 + 366) + assert_equal(np.array('2400', dtype='M8[D]').astype('i8'), + (2400 - 1970)*365 + (2400 - 1972)//4 - 3) + assert_equal(np.array('2401', dtype='M8[D]').astype('i8'), + (2400 - 1970)*365 + (2400 - 1972)//4 - 3 + 366) + + assert_equal(np.array('1600-02-29', dtype='M8[D]').astype('i8'), + (1600-1970)*365 - (1972-1600)//4 + 3 + 31 + 28) + assert_equal(np.array('1600-03-01', dtype='M8[D]').astype('i8'), + (1600-1970)*365 - (1972-1600)//4 + 3 + 31 + 29) + assert_equal(np.array('2000-02-29', dtype='M8[D]').astype('i8'), + (2000 - 1970)*365 + (2000 - 1972)//4 + 31 + 28) + assert_equal(np.array('2000-03-01', dtype='M8[D]').astype('i8'), + (2000 - 1970)*365 + (2000 - 1972)//4 + 31 + 29) + assert_equal(np.array('2001-03-22', dtype='M8[D]').astype('i8'), + (2000 - 1970)*365 + (2000 - 1972)//4 + 366 + 31 + 28 + 21) + + def test_days_to_pydate(self): + assert_equal(np.array('1599', dtype='M8[D]').astype('O'), + datetime.date(1599, 1, 1)) + assert_equal(np.array('1600', dtype='M8[D]').astype('O'), + datetime.date(1600, 1, 1)) + assert_equal(np.array('1601', dtype='M8[D]').astype('O'), + datetime.date(1601, 1, 1)) + assert_equal(np.array('1900', dtype='M8[D]').astype('O'), + datetime.date(1900, 1, 1)) + assert_equal(np.array('1901', dtype='M8[D]').astype('O'), + datetime.date(1901, 1, 1)) + assert_equal(np.array('2000', dtype='M8[D]').astype('O'), + datetime.date(2000, 1, 1)) + assert_equal(np.array('2001', dtype='M8[D]').astype('O'), + datetime.date(2001, 1, 1)) + assert_equal(np.array('1600-02-29', dtype='M8[D]').astype('O'), + datetime.date(1600, 2, 29)) + assert_equal(np.array('1600-03-01', dtype='M8[D]').astype('O'), + datetime.date(1600, 3, 1)) + assert_equal(np.array('2001-03-22', dtype='M8[D]').astype('O'), + datetime.date(2001, 3, 22)) + + def test_dtype_comparison(self): + assert_(not (np.dtype('M8[us]') == np.dtype('M8[ms]'))) + assert_(np.dtype('M8[us]') != np.dtype('M8[ms]')) + assert_(np.dtype('M8[2D]') != np.dtype('M8[D]')) + assert_(np.dtype('M8[D]') != np.dtype('M8[2D]')) + + def test_pydatetime_creation(self): + a = np.array(['1960-03-12', datetime.date(1960, 3, 12)], dtype='M8[D]') + assert_equal(a[0], a[1]) + a = np.array(['1999-12-31', datetime.date(1999, 12, 31)], dtype='M8[D]') + assert_equal(a[0], a[1]) + a = np.array(['2000-01-01', datetime.date(2000, 1, 1)], dtype='M8[D]') + assert_equal(a[0], a[1]) + # Will fail if the date changes during the exact right moment + a = np.array(['today', datetime.date.today()], dtype='M8[D]') + assert_equal(a[0], a[1]) + # datetime.datetime.now() returns local time, not UTC + #a = np.array(['now', datetime.datetime.now()], dtype='M8[s]') + #assert_equal(a[0], a[1]) + + # we can give a datetime.date time units + assert_equal(np.array(datetime.date(1960, 3, 12), dtype='M8[s]'), + np.array(np.datetime64('1960-03-12T00:00:00'))) + + def test_datetime_string_conversion(self): + a = ['2011-03-16', '1920-01-01', '2013-05-19'] + str_a = np.array(a, dtype='S') + uni_a = np.array(a, dtype='U') + dt_a = np.array(a, dtype='M') + + # String to datetime + assert_equal(dt_a, str_a.astype('M')) + assert_equal(dt_a.dtype, str_a.astype('M').dtype) + dt_b = np.empty_like(dt_a) + dt_b[...] = str_a + assert_equal(dt_a, dt_b) + + # Datetime to string + assert_equal(str_a, dt_a.astype('S0')) + str_b = np.empty_like(str_a) + str_b[...] = dt_a + assert_equal(str_a, str_b) + + # Unicode to datetime + assert_equal(dt_a, uni_a.astype('M')) + assert_equal(dt_a.dtype, uni_a.astype('M').dtype) + dt_b = np.empty_like(dt_a) + dt_b[...] = uni_a + assert_equal(dt_a, dt_b) + + # Datetime to unicode + assert_equal(uni_a, dt_a.astype('U')) + uni_b = np.empty_like(uni_a) + uni_b[...] = dt_a + assert_equal(uni_a, uni_b) + + # Datetime to long string - gh-9712 + assert_equal(str_a, dt_a.astype((np.bytes_, 128))) + str_b = np.empty(str_a.shape, dtype=(np.bytes_, 128)) + str_b[...] = dt_a + assert_equal(str_a, str_b) + + @pytest.mark.parametrize("time_dtype", ["m8[D]", "M8[Y]"]) + def test_time_byteswapping(self, time_dtype): + times = np.array(["2017", "NaT"], dtype=time_dtype) + times_swapped = times.astype(times.dtype.newbyteorder()) + assert_array_equal(times, times_swapped) + + unswapped = times_swapped.view(np.dtype("int64").newbyteorder()) + assert_array_equal(unswapped, times.view(np.int64)) + + @pytest.mark.parametrize(["time1", "time2"], + [("M8[s]", "M8[D]"), ("m8[s]", "m8[ns]")]) + def test_time_byteswapped_cast(self, time1, time2): + dtype1 = np.dtype(time1) + dtype2 = np.dtype(time2) + times = np.array(["2017", "NaT"], dtype=dtype1) + expected = times.astype(dtype2) + + # Test that every byte-swapping combination also returns the same + # results (previous tests check that this comparison works fine). + res = times.astype(dtype1.newbyteorder()).astype(dtype2) + assert_array_equal(res, expected) + res = times.astype(dtype2.newbyteorder()) + assert_array_equal(res, expected) + res = times.astype(dtype1.newbyteorder()).astype(dtype2.newbyteorder()) + assert_array_equal(res, expected) + + @pytest.mark.parametrize("time_dtype", ["m8[D]", "M8[Y]"]) + @pytest.mark.parametrize("str_dtype", ["U", "S"]) + def test_datetime_conversions_byteorders(self, str_dtype, time_dtype): + times = np.array(["2017", "NaT"], dtype=time_dtype) + # Unfortunately, timedelta does not roundtrip: + from_strings = np.array(["2017", "NaT"], dtype=str_dtype) + to_strings = times.astype(str_dtype) # assume this is correct + + # Check that conversion from times to string works if src is swapped: + times_swapped = times.astype(times.dtype.newbyteorder()) + res = times_swapped.astype(str_dtype) + assert_array_equal(res, to_strings) + # And also if both are swapped: + res = times_swapped.astype(to_strings.dtype.newbyteorder()) + assert_array_equal(res, to_strings) + # only destination is swapped: + res = times.astype(to_strings.dtype.newbyteorder()) + assert_array_equal(res, to_strings) + + # Check that conversion from string to times works if src is swapped: + from_strings_swapped = from_strings.astype( + from_strings.dtype.newbyteorder()) + res = from_strings_swapped.astype(time_dtype) + assert_array_equal(res, times) + # And if both are swapped: + res = from_strings_swapped.astype(times.dtype.newbyteorder()) + assert_array_equal(res, times) + # Only destination is swapped: + res = from_strings.astype(times.dtype.newbyteorder()) + assert_array_equal(res, times) + + def test_datetime_array_str(self): + a = np.array(['2011-03-16', '1920-01-01', '2013-05-19'], dtype='M') + assert_equal(str(a), "['2011-03-16' '1920-01-01' '2013-05-19']") + + a = np.array(['2011-03-16T13:55', '1920-01-01T03:12'], dtype='M') + assert_equal(np.array2string(a, separator=', ', + formatter={'datetime': lambda x: + "'%s'" % np.datetime_as_string(x, timezone='UTC')}), + "['2011-03-16T13:55Z', '1920-01-01T03:12Z']") + + # Check that one NaT doesn't corrupt subsequent entries + a = np.array(['2010', 'NaT', '2030']).astype('M') + assert_equal(str(a), "['2010' 'NaT' '2030']") + + def test_timedelta_array_str(self): + a = np.array([-1, 0, 100], dtype='m') + assert_equal(str(a), "[ -1 0 100]") + a = np.array(['NaT', 'NaT'], dtype='m') + assert_equal(str(a), "['NaT' 'NaT']") + # Check right-alignment with NaTs + a = np.array([-1, 'NaT', 0], dtype='m') + assert_equal(str(a), "[ -1 'NaT' 0]") + a = np.array([-1, 'NaT', 1234567], dtype='m') + assert_equal(str(a), "[ -1 'NaT' 1234567]") + + # Test with other byteorder: + a = np.array([-1, 'NaT', 1234567], dtype='>m') + assert_equal(str(a), "[ -1 'NaT' 1234567]") + a = np.array([-1, 'NaT', 1234567], dtype=''\np4\nNNNI-1\nI-1\nI0\n((dp5\n(S'us'\np6\n" + \ + b"I1\nI1\nI1\ntp7\ntp8\ntp9\nb." + assert_equal(pickle.loads(pkl), np.dtype('>M8[us]')) + + def test_setstate(self): + "Verify that datetime dtype __setstate__ can handle bad arguments" + dt = np.dtype('>M8[us]') + assert_raises(ValueError, dt.__setstate__, (4, '>', None, None, None, -1, -1, 0, 1)) + assert_(dt.__reduce__()[2] == np.dtype('>M8[us]').__reduce__()[2]) + assert_raises(TypeError, dt.__setstate__, (4, '>', None, None, None, -1, -1, 0, ({}, 'xxx'))) + assert_(dt.__reduce__()[2] == np.dtype('>M8[us]').__reduce__()[2]) + + def test_dtype_promotion(self): + # datetime datetime computes the metadata gcd + # timedelta timedelta computes the metadata gcd + for mM in ['m', 'M']: + assert_equal( + np.promote_types(np.dtype(mM+'8[2Y]'), np.dtype(mM+'8[2Y]')), + np.dtype(mM+'8[2Y]')) + assert_equal( + np.promote_types(np.dtype(mM+'8[12Y]'), np.dtype(mM+'8[15Y]')), + np.dtype(mM+'8[3Y]')) + assert_equal( + np.promote_types(np.dtype(mM+'8[62M]'), np.dtype(mM+'8[24M]')), + np.dtype(mM+'8[2M]')) + assert_equal( + np.promote_types(np.dtype(mM+'8[1W]'), np.dtype(mM+'8[2D]')), + np.dtype(mM+'8[1D]')) + assert_equal( + np.promote_types(np.dtype(mM+'8[W]'), np.dtype(mM+'8[13s]')), + np.dtype(mM+'8[s]')) + assert_equal( + np.promote_types(np.dtype(mM+'8[13W]'), np.dtype(mM+'8[49s]')), + np.dtype(mM+'8[7s]')) + # timedelta timedelta raises when there is no reasonable gcd + assert_raises(TypeError, np.promote_types, + np.dtype('m8[Y]'), np.dtype('m8[D]')) + assert_raises(TypeError, np.promote_types, + np.dtype('m8[M]'), np.dtype('m8[W]')) + # timedelta and float cannot be safely cast with each other + assert_raises(TypeError, np.promote_types, "float32", "m8") + assert_raises(TypeError, np.promote_types, "m8", "float32") + assert_raises(TypeError, np.promote_types, "uint64", "m8") + assert_raises(TypeError, np.promote_types, "m8", "uint64") + + # timedelta timedelta may overflow with big unit ranges + assert_raises(OverflowError, np.promote_types, + np.dtype('m8[W]'), np.dtype('m8[fs]')) + assert_raises(OverflowError, np.promote_types, + np.dtype('m8[s]'), np.dtype('m8[as]')) + + def test_cast_overflow(self): + # gh-4486 + def cast(): + numpy.datetime64("1971-01-01 00:00:00.000000000000000").astype("datetime64[%s]', + 'timedelta64[%s]']) + def test_isfinite_isinf_isnan_units(self, unit, dstr): + '''check isfinite, isinf, isnan for all units of M, m dtypes + ''' + arr_val = [123, -321, "NaT"] + arr = np.array(arr_val, dtype= dstr % unit) + pos = np.array([True, True, False]) + neg = np.array([False, False, True]) + false = np.array([False, False, False]) + assert_equal(np.isfinite(arr), pos) + assert_equal(np.isinf(arr), false) + assert_equal(np.isnan(arr), neg) + + def test_assert_equal(self): + assert_raises(AssertionError, assert_equal, + np.datetime64('nat'), np.timedelta64('nat')) + + def test_corecursive_input(self): + # construct a co-recursive list + a, b = [], [] + a.append(b) + b.append(a) + obj_arr = np.array([None]) + obj_arr[0] = a + + # At some point this caused a stack overflow (gh-11154). Now raises + # ValueError since the nested list cannot be converted to a datetime. + assert_raises(ValueError, obj_arr.astype, 'M8') + assert_raises(ValueError, obj_arr.astype, 'm8') + + @pytest.mark.parametrize("shape", [(), (1,)]) + def test_discovery_from_object_array(self, shape): + arr = np.array("2020-10-10", dtype=object).reshape(shape) + res = np.array("2020-10-10", dtype="M8").reshape(shape) + assert res.dtype == np.dtype("M8[D]") + assert_equal(arr.astype("M8"), res) + arr[...] = np.bytes_("2020-10-10") # try a numpy string type + assert_equal(arr.astype("M8"), res) + arr = arr.astype("S") + assert_equal(arr.astype("S").astype("M8"), res) + + @pytest.mark.parametrize("time_unit", [ + "Y", "M", "W", "D", "h", "m", "s", "ms", "us", "ns", "ps", "fs", "as", + # compound units + "10D", "2M", + ]) + def test_limit_symmetry(self, time_unit): + """ + Dates should have symmetric limits around the unix epoch at +/-np.int64 + """ + epoch = np.datetime64(0, time_unit) + latest = np.datetime64(np.iinfo(np.int64).max, time_unit) + earliest = np.datetime64(-np.iinfo(np.int64).max, time_unit) + + # above should not have overflowed + assert earliest < epoch < latest + + @pytest.mark.parametrize("time_unit", [ + "Y", "M", + pytest.param("W", marks=pytest.mark.xfail(reason="gh-13197")), + "D", "h", "m", + "s", "ms", "us", "ns", "ps", "fs", "as", + pytest.param("10D", marks=pytest.mark.xfail(reason="similar to gh-13197")), + ]) + @pytest.mark.parametrize("sign", [-1, 1]) + def test_limit_str_roundtrip(self, time_unit, sign): + """ + Limits should roundtrip when converted to strings. + + This tests the conversion to and from npy_datetimestruct. + """ + # TODO: add absolute (gold standard) time span limit strings + limit = np.datetime64(np.iinfo(np.int64).max * sign, time_unit) + + # Convert to string and back. Explicit unit needed since the day and + # week reprs are not distinguishable. + limit_via_str = np.datetime64(str(limit), time_unit) + assert limit_via_str == limit + + +class TestDateTimeData: + + def test_basic(self): + a = np.array(['1980-03-23'], dtype=np.datetime64) + assert_equal(np.datetime_data(a.dtype), ('D', 1)) + + def test_bytes(self): + # byte units are converted to unicode + dt = np.datetime64('2000', (b'ms', 5)) + assert np.datetime_data(dt.dtype) == ('ms', 5) + + dt = np.datetime64('2000', b'5ms') + assert np.datetime_data(dt.dtype) == ('ms', 5) + + def test_non_ascii(self): + # μs is normalized to μ + dt = np.datetime64('2000', ('μs', 5)) + assert np.datetime_data(dt.dtype) == ('us', 5) + + dt = np.datetime64('2000', '5μs') + assert np.datetime_data(dt.dtype) == ('us', 5) + + +def test_comparisons_return_not_implemented(): + # GH#17017 + + class custom: + __array_priority__ = 10000 + + obj = custom() + + dt = np.datetime64('2000', 'ns') + td = dt - dt + + for item in [dt, td]: + assert item.__eq__(obj) is NotImplemented + assert item.__ne__(obj) is NotImplemented + assert item.__le__(obj) is NotImplemented + assert item.__lt__(obj) is NotImplemented + assert item.__ge__(obj) is NotImplemented + assert item.__gt__(obj) is NotImplemented diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_defchararray.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_defchararray.py new file mode 100644 index 0000000000000000000000000000000000000000..a7716ab7baf0de8315e98f45dd67d857edd3e032 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_defchararray.py @@ -0,0 +1,812 @@ +import pytest + +import numpy as np +from numpy._core.multiarray import _vec_string +from numpy.testing import ( + assert_, assert_equal, assert_array_equal, assert_raises, + assert_raises_regex + ) + +kw_unicode_true = {'unicode': True} # make 2to3 work properly +kw_unicode_false = {'unicode': False} + +class TestBasic: + def test_from_object_array(self): + A = np.array([['abc', 2], + ['long ', '0123456789']], dtype='O') + B = np.char.array(A) + assert_equal(B.dtype.itemsize, 10) + assert_array_equal(B, [[b'abc', b'2'], + [b'long', b'0123456789']]) + + def test_from_object_array_unicode(self): + A = np.array([['abc', 'Sigma \u03a3'], + ['long ', '0123456789']], dtype='O') + assert_raises(ValueError, np.char.array, (A,)) + B = np.char.array(A, **kw_unicode_true) + assert_equal(B.dtype.itemsize, 10 * np.array('a', 'U').dtype.itemsize) + assert_array_equal(B, [['abc', 'Sigma \u03a3'], + ['long', '0123456789']]) + + def test_from_string_array(self): + A = np.array([[b'abc', b'foo'], + [b'long ', b'0123456789']]) + assert_equal(A.dtype.type, np.bytes_) + B = np.char.array(A) + assert_array_equal(B, A) + assert_equal(B.dtype, A.dtype) + assert_equal(B.shape, A.shape) + B[0, 0] = 'changed' + assert_(B[0, 0] != A[0, 0]) + C = np.char.asarray(A) + assert_array_equal(C, A) + assert_equal(C.dtype, A.dtype) + C[0, 0] = 'changed again' + assert_(C[0, 0] != B[0, 0]) + assert_(C[0, 0] == A[0, 0]) + + def test_from_unicode_array(self): + A = np.array([['abc', 'Sigma \u03a3'], + ['long ', '0123456789']]) + assert_equal(A.dtype.type, np.str_) + B = np.char.array(A) + assert_array_equal(B, A) + assert_equal(B.dtype, A.dtype) + assert_equal(B.shape, A.shape) + B = np.char.array(A, **kw_unicode_true) + assert_array_equal(B, A) + assert_equal(B.dtype, A.dtype) + assert_equal(B.shape, A.shape) + + def fail(): + np.char.array(A, **kw_unicode_false) + + assert_raises(UnicodeEncodeError, fail) + + def test_unicode_upconvert(self): + A = np.char.array(['abc']) + B = np.char.array(['\u03a3']) + assert_(issubclass((A + B).dtype.type, np.str_)) + + def test_from_string(self): + A = np.char.array(b'abc') + assert_equal(len(A), 1) + assert_equal(len(A[0]), 3) + assert_(issubclass(A.dtype.type, np.bytes_)) + + def test_from_unicode(self): + A = np.char.array('\u03a3') + assert_equal(len(A), 1) + assert_equal(len(A[0]), 1) + assert_equal(A.itemsize, 4) + assert_(issubclass(A.dtype.type, np.str_)) + +class TestVecString: + def test_non_existent_method(self): + + def fail(): + _vec_string('a', np.bytes_, 'bogus') + + assert_raises(AttributeError, fail) + + def test_non_string_array(self): + + def fail(): + _vec_string(1, np.bytes_, 'strip') + + assert_raises(TypeError, fail) + + def test_invalid_args_tuple(self): + + def fail(): + _vec_string(['a'], np.bytes_, 'strip', 1) + + assert_raises(TypeError, fail) + + def test_invalid_type_descr(self): + + def fail(): + _vec_string(['a'], 'BOGUS', 'strip') + + assert_raises(TypeError, fail) + + def test_invalid_function_args(self): + + def fail(): + _vec_string(['a'], np.bytes_, 'strip', (1,)) + + assert_raises(TypeError, fail) + + def test_invalid_result_type(self): + + def fail(): + _vec_string(['a'], np.int_, 'strip') + + assert_raises(TypeError, fail) + + def test_broadcast_error(self): + + def fail(): + _vec_string([['abc', 'def']], np.int_, 'find', (['a', 'd', 'j'],)) + + assert_raises(ValueError, fail) + + +class TestWhitespace: + def setup_method(self): + self.A = np.array([['abc ', '123 '], + ['789 ', 'xyz ']]).view(np.char.chararray) + self.B = np.array([['abc', '123'], + ['789', 'xyz']]).view(np.char.chararray) + + def test1(self): + assert_(np.all(self.A == self.B)) + assert_(np.all(self.A >= self.B)) + assert_(np.all(self.A <= self.B)) + assert_(not np.any(self.A > self.B)) + assert_(not np.any(self.A < self.B)) + assert_(not np.any(self.A != self.B)) + +class TestChar: + def setup_method(self): + self.A = np.array('abc1', dtype='c').view(np.char.chararray) + + def test_it(self): + assert_equal(self.A.shape, (4,)) + assert_equal(self.A.upper()[:2].tobytes(), b'AB') + +class TestComparisons: + def setup_method(self): + self.A = np.array([['abc', 'abcc', '123'], + ['789', 'abc', 'xyz']]).view(np.char.chararray) + self.B = np.array([['efg', 'efg', '123 '], + ['051', 'efgg', 'tuv']]).view(np.char.chararray) + + def test_not_equal(self): + assert_array_equal((self.A != self.B), + [[True, True, False], [True, True, True]]) + + def test_equal(self): + assert_array_equal((self.A == self.B), + [[False, False, True], [False, False, False]]) + + def test_greater_equal(self): + assert_array_equal((self.A >= self.B), + [[False, False, True], [True, False, True]]) + + def test_less_equal(self): + assert_array_equal((self.A <= self.B), + [[True, True, True], [False, True, False]]) + + def test_greater(self): + assert_array_equal((self.A > self.B), + [[False, False, False], [True, False, True]]) + + def test_less(self): + assert_array_equal((self.A < self.B), + [[True, True, False], [False, True, False]]) + + def test_type(self): + out1 = np.char.equal(self.A, self.B) + out2 = np.char.equal('a', 'a') + assert_(isinstance(out1, np.ndarray)) + assert_(isinstance(out2, np.ndarray)) + +class TestComparisonsMixed1(TestComparisons): + """Ticket #1276""" + + def setup_method(self): + TestComparisons.setup_method(self) + self.B = np.array( + [['efg', 'efg', '123 '], + ['051', 'efgg', 'tuv']], np.str_).view(np.char.chararray) + +class TestComparisonsMixed2(TestComparisons): + """Ticket #1276""" + + def setup_method(self): + TestComparisons.setup_method(self) + self.A = np.array( + [['abc', 'abcc', '123'], + ['789', 'abc', 'xyz']], np.str_).view(np.char.chararray) + +class TestInformation: + def setup_method(self): + self.A = np.array([[' abc ', ''], + ['12345', 'MixedCase'], + ['123 \t 345 \0 ', 'UPPER']]) \ + .view(np.char.chararray) + self.B = np.array([[' \u03a3 ', ''], + ['12345', 'MixedCase'], + ['123 \t 345 \0 ', 'UPPER']]) \ + .view(np.char.chararray) + # Array with longer strings, > MEMCHR_CUT_OFF in code. + self.C = (np.array(['ABCDEFGHIJKLMNOPQRSTUVWXYZ', + '01234567890123456789012345']) + .view(np.char.chararray)) + + def test_len(self): + assert_(issubclass(np.char.str_len(self.A).dtype.type, np.integer)) + assert_array_equal(np.char.str_len(self.A), [[5, 0], [5, 9], [12, 5]]) + assert_array_equal(np.char.str_len(self.B), [[3, 0], [5, 9], [12, 5]]) + + def test_count(self): + assert_(issubclass(self.A.count('').dtype.type, np.integer)) + assert_array_equal(self.A.count('a'), [[1, 0], [0, 1], [0, 0]]) + assert_array_equal(self.A.count('123'), [[0, 0], [1, 0], [1, 0]]) + # Python doesn't seem to like counting NULL characters + # assert_array_equal(self.A.count('\0'), [[0, 0], [0, 0], [1, 0]]) + assert_array_equal(self.A.count('a', 0, 2), [[1, 0], [0, 0], [0, 0]]) + assert_array_equal(self.B.count('a'), [[0, 0], [0, 1], [0, 0]]) + assert_array_equal(self.B.count('123'), [[0, 0], [1, 0], [1, 0]]) + # assert_array_equal(self.B.count('\0'), [[0, 0], [0, 0], [1, 0]]) + + def test_endswith(self): + assert_(issubclass(self.A.endswith('').dtype.type, np.bool)) + assert_array_equal(self.A.endswith(' '), [[1, 0], [0, 0], [1, 0]]) + assert_array_equal(self.A.endswith('3', 0, 3), [[0, 0], [1, 0], [1, 0]]) + + def fail(): + self.A.endswith('3', 'fdjk') + + assert_raises(TypeError, fail) + + @pytest.mark.parametrize( + "dtype, encode", + [("U", str), + ("S", lambda x: x.encode('ascii')), + ]) + def test_find(self, dtype, encode): + A = self.A.astype(dtype) + assert_(issubclass(A.find(encode('a')).dtype.type, np.integer)) + assert_array_equal(A.find(encode('a')), + [[1, -1], [-1, 6], [-1, -1]]) + assert_array_equal(A.find(encode('3')), + [[-1, -1], [2, -1], [2, -1]]) + assert_array_equal(A.find(encode('a'), 0, 2), + [[1, -1], [-1, -1], [-1, -1]]) + assert_array_equal(A.find([encode('1'), encode('P')]), + [[-1, -1], [0, -1], [0, 1]]) + C = self.C.astype(dtype) + assert_array_equal(C.find(encode('M')), [12, -1]) + + def test_index(self): + + def fail(): + self.A.index('a') + + assert_raises(ValueError, fail) + assert_(np.char.index('abcba', 'b') == 1) + assert_(issubclass(np.char.index('abcba', 'b').dtype.type, np.integer)) + + def test_isalnum(self): + assert_(issubclass(self.A.isalnum().dtype.type, np.bool)) + assert_array_equal(self.A.isalnum(), [[False, False], [True, True], [False, True]]) + + def test_isalpha(self): + assert_(issubclass(self.A.isalpha().dtype.type, np.bool)) + assert_array_equal(self.A.isalpha(), [[False, False], [False, True], [False, True]]) + + def test_isdigit(self): + assert_(issubclass(self.A.isdigit().dtype.type, np.bool)) + assert_array_equal(self.A.isdigit(), [[False, False], [True, False], [False, False]]) + + def test_islower(self): + assert_(issubclass(self.A.islower().dtype.type, np.bool)) + assert_array_equal(self.A.islower(), [[True, False], [False, False], [False, False]]) + + def test_isspace(self): + assert_(issubclass(self.A.isspace().dtype.type, np.bool)) + assert_array_equal(self.A.isspace(), [[False, False], [False, False], [False, False]]) + + def test_istitle(self): + assert_(issubclass(self.A.istitle().dtype.type, np.bool)) + assert_array_equal(self.A.istitle(), [[False, False], [False, False], [False, False]]) + + def test_isupper(self): + assert_(issubclass(self.A.isupper().dtype.type, np.bool)) + assert_array_equal(self.A.isupper(), [[False, False], [False, False], [False, True]]) + + def test_rfind(self): + assert_(issubclass(self.A.rfind('a').dtype.type, np.integer)) + assert_array_equal(self.A.rfind('a'), [[1, -1], [-1, 6], [-1, -1]]) + assert_array_equal(self.A.rfind('3'), [[-1, -1], [2, -1], [6, -1]]) + assert_array_equal(self.A.rfind('a', 0, 2), [[1, -1], [-1, -1], [-1, -1]]) + assert_array_equal(self.A.rfind(['1', 'P']), [[-1, -1], [0, -1], [0, 2]]) + + def test_rindex(self): + + def fail(): + self.A.rindex('a') + + assert_raises(ValueError, fail) + assert_(np.char.rindex('abcba', 'b') == 3) + assert_(issubclass(np.char.rindex('abcba', 'b').dtype.type, np.integer)) + + def test_startswith(self): + assert_(issubclass(self.A.startswith('').dtype.type, np.bool)) + assert_array_equal(self.A.startswith(' '), [[1, 0], [0, 0], [0, 0]]) + assert_array_equal(self.A.startswith('1', 0, 3), [[0, 0], [1, 0], [1, 0]]) + + def fail(): + self.A.startswith('3', 'fdjk') + + assert_raises(TypeError, fail) + + +class TestMethods: + def setup_method(self): + self.A = np.array([[' abc ', ''], + ['12345', 'MixedCase'], + ['123 \t 345 \0 ', 'UPPER']], + dtype='S').view(np.char.chararray) + self.B = np.array([[' \u03a3 ', ''], + ['12345', 'MixedCase'], + ['123 \t 345 \0 ', 'UPPER']]).view( + np.char.chararray) + + def test_capitalize(self): + tgt = [[b' abc ', b''], + [b'12345', b'Mixedcase'], + [b'123 \t 345 \0 ', b'Upper']] + assert_(issubclass(self.A.capitalize().dtype.type, np.bytes_)) + assert_array_equal(self.A.capitalize(), tgt) + + tgt = [[' \u03c3 ', ''], + ['12345', 'Mixedcase'], + ['123 \t 345 \0 ', 'Upper']] + assert_(issubclass(self.B.capitalize().dtype.type, np.str_)) + assert_array_equal(self.B.capitalize(), tgt) + + def test_center(self): + assert_(issubclass(self.A.center(10).dtype.type, np.bytes_)) + C = self.A.center([10, 20]) + assert_array_equal(np.char.str_len(C), [[10, 20], [10, 20], [12, 20]]) + + C = self.A.center(20, b'#') + assert_(np.all(C.startswith(b'#'))) + assert_(np.all(C.endswith(b'#'))) + + C = np.char.center(b'FOO', [[10, 20], [15, 8]]) + tgt = [[b' FOO ', b' FOO '], + [b' FOO ', b' FOO ']] + assert_(issubclass(C.dtype.type, np.bytes_)) + assert_array_equal(C, tgt) + + def test_decode(self): + A = np.char.array([b'\\u03a3']) + assert_(A.decode('unicode-escape')[0] == '\u03a3') + + def test_encode(self): + B = self.B.encode('unicode_escape') + assert_(B[0][0] == str(' \\u03a3 ').encode('latin1')) + + def test_expandtabs(self): + T = self.A.expandtabs() + assert_(T[2, 0] == b'123 345 \0') + + def test_join(self): + # NOTE: list(b'123') == [49, 50, 51] + # so that b','.join(b'123') results to an error on Py3 + A0 = self.A.decode('ascii') + + A = np.char.join([',', '#'], A0) + assert_(issubclass(A.dtype.type, np.str_)) + tgt = np.array([[' ,a,b,c, ', ''], + ['1,2,3,4,5', 'M#i#x#e#d#C#a#s#e'], + ['1,2,3, ,\t, ,3,4,5, ,\x00, ', 'U#P#P#E#R']]) + assert_array_equal(np.char.join([',', '#'], A0), tgt) + + def test_ljust(self): + assert_(issubclass(self.A.ljust(10).dtype.type, np.bytes_)) + + C = self.A.ljust([10, 20]) + assert_array_equal(np.char.str_len(C), [[10, 20], [10, 20], [12, 20]]) + + C = self.A.ljust(20, b'#') + assert_array_equal(C.startswith(b'#'), [ + [False, True], [False, False], [False, False]]) + assert_(np.all(C.endswith(b'#'))) + + C = np.char.ljust(b'FOO', [[10, 20], [15, 8]]) + tgt = [[b'FOO ', b'FOO '], + [b'FOO ', b'FOO ']] + assert_(issubclass(C.dtype.type, np.bytes_)) + assert_array_equal(C, tgt) + + def test_lower(self): + tgt = [[b' abc ', b''], + [b'12345', b'mixedcase'], + [b'123 \t 345 \0 ', b'upper']] + assert_(issubclass(self.A.lower().dtype.type, np.bytes_)) + assert_array_equal(self.A.lower(), tgt) + + tgt = [[' \u03c3 ', ''], + ['12345', 'mixedcase'], + ['123 \t 345 \0 ', 'upper']] + assert_(issubclass(self.B.lower().dtype.type, np.str_)) + assert_array_equal(self.B.lower(), tgt) + + def test_lstrip(self): + tgt = [[b'abc ', b''], + [b'12345', b'MixedCase'], + [b'123 \t 345 \0 ', b'UPPER']] + assert_(issubclass(self.A.lstrip().dtype.type, np.bytes_)) + assert_array_equal(self.A.lstrip(), tgt) + + tgt = [[b' abc', b''], + [b'2345', b'ixedCase'], + [b'23 \t 345 \x00', b'UPPER']] + assert_array_equal(self.A.lstrip([b'1', b'M']), tgt) + + tgt = [['\u03a3 ', ''], + ['12345', 'MixedCase'], + ['123 \t 345 \0 ', 'UPPER']] + assert_(issubclass(self.B.lstrip().dtype.type, np.str_)) + assert_array_equal(self.B.lstrip(), tgt) + + def test_partition(self): + P = self.A.partition([b'3', b'M']) + tgt = [[(b' abc ', b'', b''), (b'', b'', b'')], + [(b'12', b'3', b'45'), (b'', b'M', b'ixedCase')], + [(b'12', b'3', b' \t 345 \0 '), (b'UPPER', b'', b'')]] + assert_(issubclass(P.dtype.type, np.bytes_)) + assert_array_equal(P, tgt) + + def test_replace(self): + R = self.A.replace([b'3', b'a'], + [b'##########', b'@']) + tgt = [[b' abc ', b''], + [b'12##########45', b'MixedC@se'], + [b'12########## \t ##########45 \x00 ', b'UPPER']] + assert_(issubclass(R.dtype.type, np.bytes_)) + assert_array_equal(R, tgt) + # Test special cases that should just return the input array, + # since replacements are not possible or do nothing. + S1 = self.A.replace(b'A very long byte string, longer than A', b'') + assert_array_equal(S1, self.A) + S2 = self.A.replace(b'', b'') + assert_array_equal(S2, self.A) + S3 = self.A.replace(b'3', b'3') + assert_array_equal(S3, self.A) + S4 = self.A.replace(b'3', b'', count=0) + assert_array_equal(S4, self.A) + + def test_replace_count_and_size(self): + a = np.array(['0123456789' * i for i in range(4)] + ).view(np.char.chararray) + r1 = a.replace('5', 'ABCDE') + assert r1.dtype.itemsize == (3*10 + 3*4) * 4 + assert_array_equal(r1, np.array(['01234ABCDE6789' * i + for i in range(4)])) + r2 = a.replace('5', 'ABCDE', count=1) + assert r2.dtype.itemsize == (3*10 + 4) * 4 + r3 = a.replace('5', 'ABCDE', count=0) + assert r3.dtype.itemsize == a.dtype.itemsize + assert_array_equal(r3, a) + # Negative values mean to replace all. + r4 = a.replace('5', 'ABCDE', count=-1) + assert r4.dtype.itemsize == (3*10 + 3*4) * 4 + assert_array_equal(r4, r1) + # We can do count on an element-by-element basis. + r5 = a.replace('5', 'ABCDE', count=[-1, -1, -1, 1]) + assert r5.dtype.itemsize == (3*10 + 4) * 4 + assert_array_equal(r5, np.array( + ['01234ABCDE6789' * i for i in range(3)] + + ['01234ABCDE6789' + '0123456789' * 2])) + + def test_replace_broadcasting(self): + a = np.array('0,0,0').view(np.char.chararray) + r1 = a.replace('0', '1', count=np.arange(3)) + assert r1.dtype == a.dtype + assert_array_equal(r1, np.array(['0,0,0', '1,0,0', '1,1,0'])) + r2 = a.replace('0', [['1'], ['2']], count=np.arange(1, 4)) + assert_array_equal(r2, np.array([['1,0,0', '1,1,0', '1,1,1'], + ['2,0,0', '2,2,0', '2,2,2']])) + r3 = a.replace(['0', '0,0', '0,0,0'], 'X') + assert_array_equal(r3, np.array(['X,X,X', 'X,0', 'X'])) + + def test_rjust(self): + assert_(issubclass(self.A.rjust(10).dtype.type, np.bytes_)) + + C = self.A.rjust([10, 20]) + assert_array_equal(np.char.str_len(C), [[10, 20], [10, 20], [12, 20]]) + + C = self.A.rjust(20, b'#') + assert_(np.all(C.startswith(b'#'))) + assert_array_equal(C.endswith(b'#'), + [[False, True], [False, False], [False, False]]) + + C = np.char.rjust(b'FOO', [[10, 20], [15, 8]]) + tgt = [[b' FOO', b' FOO'], + [b' FOO', b' FOO']] + assert_(issubclass(C.dtype.type, np.bytes_)) + assert_array_equal(C, tgt) + + def test_rpartition(self): + P = self.A.rpartition([b'3', b'M']) + tgt = [[(b'', b'', b' abc '), (b'', b'', b'')], + [(b'12', b'3', b'45'), (b'', b'M', b'ixedCase')], + [(b'123 \t ', b'3', b'45 \0 '), (b'', b'', b'UPPER')]] + assert_(issubclass(P.dtype.type, np.bytes_)) + assert_array_equal(P, tgt) + + def test_rsplit(self): + A = self.A.rsplit(b'3') + tgt = [[[b' abc '], [b'']], + [[b'12', b'45'], [b'MixedCase']], + [[b'12', b' \t ', b'45 \x00 '], [b'UPPER']]] + assert_(issubclass(A.dtype.type, np.object_)) + assert_equal(A.tolist(), tgt) + + def test_rstrip(self): + assert_(issubclass(self.A.rstrip().dtype.type, np.bytes_)) + + tgt = [[b' abc', b''], + [b'12345', b'MixedCase'], + [b'123 \t 345', b'UPPER']] + assert_array_equal(self.A.rstrip(), tgt) + + tgt = [[b' abc ', b''], + [b'1234', b'MixedCase'], + [b'123 \t 345 \x00', b'UPP'] + ] + assert_array_equal(self.A.rstrip([b'5', b'ER']), tgt) + + tgt = [[' \u03a3', ''], + ['12345', 'MixedCase'], + ['123 \t 345', 'UPPER']] + assert_(issubclass(self.B.rstrip().dtype.type, np.str_)) + assert_array_equal(self.B.rstrip(), tgt) + + def test_strip(self): + tgt = [[b'abc', b''], + [b'12345', b'MixedCase'], + [b'123 \t 345', b'UPPER']] + assert_(issubclass(self.A.strip().dtype.type, np.bytes_)) + assert_array_equal(self.A.strip(), tgt) + + tgt = [[b' abc ', b''], + [b'234', b'ixedCas'], + [b'23 \t 345 \x00', b'UPP']] + assert_array_equal(self.A.strip([b'15', b'EReM']), tgt) + + tgt = [['\u03a3', ''], + ['12345', 'MixedCase'], + ['123 \t 345', 'UPPER']] + assert_(issubclass(self.B.strip().dtype.type, np.str_)) + assert_array_equal(self.B.strip(), tgt) + + def test_split(self): + A = self.A.split(b'3') + tgt = [ + [[b' abc '], [b'']], + [[b'12', b'45'], [b'MixedCase']], + [[b'12', b' \t ', b'45 \x00 '], [b'UPPER']]] + assert_(issubclass(A.dtype.type, np.object_)) + assert_equal(A.tolist(), tgt) + + def test_splitlines(self): + A = np.char.array(['abc\nfds\nwer']).splitlines() + assert_(issubclass(A.dtype.type, np.object_)) + assert_(A.shape == (1,)) + assert_(len(A[0]) == 3) + + def test_swapcase(self): + tgt = [[b' ABC ', b''], + [b'12345', b'mIXEDcASE'], + [b'123 \t 345 \0 ', b'upper']] + assert_(issubclass(self.A.swapcase().dtype.type, np.bytes_)) + assert_array_equal(self.A.swapcase(), tgt) + + tgt = [[' \u03c3 ', ''], + ['12345', 'mIXEDcASE'], + ['123 \t 345 \0 ', 'upper']] + assert_(issubclass(self.B.swapcase().dtype.type, np.str_)) + assert_array_equal(self.B.swapcase(), tgt) + + def test_title(self): + tgt = [[b' Abc ', b''], + [b'12345', b'Mixedcase'], + [b'123 \t 345 \0 ', b'Upper']] + assert_(issubclass(self.A.title().dtype.type, np.bytes_)) + assert_array_equal(self.A.title(), tgt) + + tgt = [[' \u03a3 ', ''], + ['12345', 'Mixedcase'], + ['123 \t 345 \0 ', 'Upper']] + assert_(issubclass(self.B.title().dtype.type, np.str_)) + assert_array_equal(self.B.title(), tgt) + + def test_upper(self): + tgt = [[b' ABC ', b''], + [b'12345', b'MIXEDCASE'], + [b'123 \t 345 \0 ', b'UPPER']] + assert_(issubclass(self.A.upper().dtype.type, np.bytes_)) + assert_array_equal(self.A.upper(), tgt) + + tgt = [[' \u03a3 ', ''], + ['12345', 'MIXEDCASE'], + ['123 \t 345 \0 ', 'UPPER']] + assert_(issubclass(self.B.upper().dtype.type, np.str_)) + assert_array_equal(self.B.upper(), tgt) + + def test_isnumeric(self): + + def fail(): + self.A.isnumeric() + + assert_raises(TypeError, fail) + assert_(issubclass(self.B.isnumeric().dtype.type, np.bool)) + assert_array_equal(self.B.isnumeric(), [ + [False, False], [True, False], [False, False]]) + + def test_isdecimal(self): + + def fail(): + self.A.isdecimal() + + assert_raises(TypeError, fail) + assert_(issubclass(self.B.isdecimal().dtype.type, np.bool)) + assert_array_equal(self.B.isdecimal(), [ + [False, False], [True, False], [False, False]]) + + +class TestOperations: + def setup_method(self): + self.A = np.array([['abc', '123'], + ['789', 'xyz']]).view(np.char.chararray) + self.B = np.array([['efg', '456'], + ['051', 'tuv']]).view(np.char.chararray) + + def test_add(self): + AB = np.array([['abcefg', '123456'], + ['789051', 'xyztuv']]).view(np.char.chararray) + assert_array_equal(AB, (self.A + self.B)) + assert_(len((self.A + self.B)[0][0]) == 6) + + def test_radd(self): + QA = np.array([['qabc', 'q123'], + ['q789', 'qxyz']]).view(np.char.chararray) + assert_array_equal(QA, ('q' + self.A)) + + def test_mul(self): + A = self.A + for r in (2, 3, 5, 7, 197): + Ar = np.array([[A[0, 0]*r, A[0, 1]*r], + [A[1, 0]*r, A[1, 1]*r]]).view(np.char.chararray) + + assert_array_equal(Ar, (self.A * r)) + + for ob in [object(), 'qrs']: + with assert_raises_regex(ValueError, + 'Can only multiply by integers'): + A*ob + + def test_rmul(self): + A = self.A + for r in (2, 3, 5, 7, 197): + Ar = np.array([[A[0, 0]*r, A[0, 1]*r], + [A[1, 0]*r, A[1, 1]*r]]).view(np.char.chararray) + assert_array_equal(Ar, (r * self.A)) + + for ob in [object(), 'qrs']: + with assert_raises_regex(ValueError, + 'Can only multiply by integers'): + ob * A + + def test_mod(self): + """Ticket #856""" + F = np.array([['%d', '%f'], ['%s', '%r']]).view(np.char.chararray) + C = np.array([[3, 7], [19, 1]], dtype=np.int64) + FC = np.array([['3', '7.000000'], + ['19', 'np.int64(1)']]).view(np.char.chararray) + assert_array_equal(FC, F % C) + + A = np.array([['%.3f', '%d'], ['%s', '%r']]).view(np.char.chararray) + A1 = np.array([['1.000', '1'], + ['1', repr(np.array(1)[()])]]).view(np.char.chararray) + assert_array_equal(A1, (A % 1)) + + A2 = np.array([['1.000', '2'], + ['3', repr(np.array(4)[()])]]).view(np.char.chararray) + assert_array_equal(A2, (A % [[1, 2], [3, 4]])) + + def test_rmod(self): + assert_(("%s" % self.A) == str(self.A)) + assert_(("%r" % self.A) == repr(self.A)) + + for ob in [42, object()]: + with assert_raises_regex( + TypeError, "unsupported operand type.* and 'chararray'"): + ob % self.A + + def test_slice(self): + """Regression test for https://github.com/numpy/numpy/issues/5982""" + + arr = np.array([['abc ', 'def '], ['geh ', 'ijk ']], + dtype='S4').view(np.char.chararray) + sl1 = arr[:] + assert_array_equal(sl1, arr) + assert_(sl1.base is arr) + assert_(sl1.base.base is arr.base) + + sl2 = arr[:, :] + assert_array_equal(sl2, arr) + assert_(sl2.base is arr) + assert_(sl2.base.base is arr.base) + + assert_(arr[0, 0] == b'abc') + + +class TestMethodsEmptyArray: + def setup_method(self): + self.U = np.array([], dtype='U') + self.S = np.array([], dtype='S') + + def test_encode(self): + res = np.char.encode(self.U) + assert_array_equal(res, []) + assert_(res.dtype.char == 'S') + + def test_decode(self): + res = np.char.decode(self.S) + assert_array_equal(res, []) + assert_(res.dtype.char == 'U') + + def test_decode_with_reshape(self): + res = np.char.decode(self.S.reshape((1, 0, 1))) + assert_(res.shape == (1, 0, 1)) + + +class TestMethodsScalarValues: + def test_mod(self): + A = np.array([[' abc ', ''], + ['12345', 'MixedCase'], + ['123 \t 345 \0 ', 'UPPER']], dtype='S') + tgt = [[b'123 abc ', b'123'], + [b'12312345', b'123MixedCase'], + [b'123123 \t 345 \0 ', b'123UPPER']] + assert_array_equal(np.char.mod(b"123%s", A), tgt) + + def test_decode(self): + bytestring = b'\x81\xc1\x81\xc1\x81\xc1' + assert_equal(np.char.decode(bytestring, encoding='cp037'), + 'aAaAaA') + + def test_encode(self): + unicode = 'aAaAaA' + assert_equal(np.char.encode(unicode, encoding='cp037'), + b'\x81\xc1\x81\xc1\x81\xc1') + + def test_expandtabs(self): + s = "\tone level of indentation\n\t\ttwo levels of indentation" + assert_equal( + np.char.expandtabs(s, tabsize=2), + " one level of indentation\n two levels of indentation" + ) + + def test_join(self): + seps = np.array(['-', '_']) + assert_array_equal(np.char.join(seps, 'hello'), + ['h-e-l-l-o', 'h_e_l_l_o']) + + def test_partition(self): + assert_equal(np.char.partition('This string', ' '), + ['This', ' ', 'string']) + + def test_rpartition(self): + assert_equal(np.char.rpartition('This string here', ' '), + ['This string', ' ', 'here']) + + def test_replace(self): + assert_equal(np.char.replace('Python is good', 'good', 'great'), + 'Python is great') + + +def test_empty_indexing(): + """Regression test for ticket 1948.""" + # Check that indexing a chararray with an empty list/array returns an + # empty chararray instead of a chararray with a single empty string in it. + s = np.char.chararray((4,)) + assert_(s[[]].size == 0) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_deprecations.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_deprecations.py new file mode 100644 index 0000000000000000000000000000000000000000..21bf685e294f4e52eea50f38da22cb213e61b0e8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_deprecations.py @@ -0,0 +1,729 @@ +""" +Tests related to deprecation warnings. Also a convenient place +to document how deprecations should eventually be turned into errors. + +""" +import datetime +import operator +import warnings +import pytest +import tempfile +import re +import sys + +import numpy as np +from numpy.testing import ( + assert_raises, assert_warns, assert_, assert_array_equal, SkipTest, + KnownFailureException, break_cycles, + ) + +from numpy._core._multiarray_tests import fromstring_null_term_c_api + +try: + import pytz + _has_pytz = True +except ImportError: + _has_pytz = False + + +class _DeprecationTestCase: + # Just as warning: warnings uses re.match, so the start of this message + # must match. + message = '' + warning_cls = DeprecationWarning + + def setup_method(self): + self.warn_ctx = warnings.catch_warnings(record=True) + self.log = self.warn_ctx.__enter__() + + # Do *not* ignore other DeprecationWarnings. Ignoring warnings + # can give very confusing results because of + # https://bugs.python.org/issue4180 and it is probably simplest to + # try to keep the tests cleanly giving only the right warning type. + # (While checking them set to "error" those are ignored anyway) + # We still have them show up, because otherwise they would be raised + warnings.filterwarnings("always", category=self.warning_cls) + warnings.filterwarnings("always", message=self.message, + category=self.warning_cls) + + def teardown_method(self): + self.warn_ctx.__exit__() + + def assert_deprecated(self, function, num=1, ignore_others=False, + function_fails=False, + exceptions=np._NoValue, + args=(), kwargs={}): + """Test if DeprecationWarnings are given and raised. + + This first checks if the function when called gives `num` + DeprecationWarnings, after that it tries to raise these + DeprecationWarnings and compares them with `exceptions`. + The exceptions can be different for cases where this code path + is simply not anticipated and the exception is replaced. + + Parameters + ---------- + function : callable + The function to test + num : int + Number of DeprecationWarnings to expect. This should normally be 1. + ignore_others : bool + Whether warnings of the wrong type should be ignored (note that + the message is not checked) + function_fails : bool + If the function would normally fail, setting this will check for + warnings inside a try/except block. + exceptions : Exception or tuple of Exceptions + Exception to expect when turning the warnings into an error. + The default checks for DeprecationWarnings. If exceptions is + empty the function is expected to run successfully. + args : tuple + Arguments for `function` + kwargs : dict + Keyword arguments for `function` + """ + __tracebackhide__ = True # Hide traceback for py.test + + # reset the log + self.log[:] = [] + + if exceptions is np._NoValue: + exceptions = (self.warning_cls,) + + try: + function(*args, **kwargs) + except (Exception if function_fails else tuple()): + pass + + # just in case, clear the registry + num_found = 0 + for warning in self.log: + if warning.category is self.warning_cls: + num_found += 1 + elif not ignore_others: + raise AssertionError( + "expected %s but got: %s" % + (self.warning_cls.__name__, warning.category)) + if num is not None and num_found != num: + msg = "%i warnings found but %i expected." % (len(self.log), num) + lst = [str(w) for w in self.log] + raise AssertionError("\n".join([msg] + lst)) + + with warnings.catch_warnings(): + warnings.filterwarnings("error", message=self.message, + category=self.warning_cls) + try: + function(*args, **kwargs) + if exceptions != tuple(): + raise AssertionError( + "No error raised during function call") + except exceptions: + if exceptions == tuple(): + raise AssertionError( + "Error raised during function call") + + def assert_not_deprecated(self, function, args=(), kwargs={}): + """Test that warnings are not raised. + + This is just a shorthand for: + + self.assert_deprecated(function, num=0, ignore_others=True, + exceptions=tuple(), args=args, kwargs=kwargs) + """ + self.assert_deprecated(function, num=0, ignore_others=True, + exceptions=tuple(), args=args, kwargs=kwargs) + + +class _VisibleDeprecationTestCase(_DeprecationTestCase): + warning_cls = np.exceptions.VisibleDeprecationWarning + + +class TestDTypeAttributeIsDTypeDeprecation(_DeprecationTestCase): + # Deprecated 2021-01-05, NumPy 1.21 + message = r".*`.dtype` attribute" + + def test_deprecation_dtype_attribute_is_dtype(self): + class dt: + dtype = "f8" + + class vdt(np.void): + dtype = "f,f" + + self.assert_deprecated(lambda: np.dtype(dt)) + self.assert_deprecated(lambda: np.dtype(dt())) + self.assert_deprecated(lambda: np.dtype(vdt)) + self.assert_deprecated(lambda: np.dtype(vdt(1))) + + +class TestTestDeprecated: + def test_assert_deprecated(self): + test_case_instance = _DeprecationTestCase() + test_case_instance.setup_method() + assert_raises(AssertionError, + test_case_instance.assert_deprecated, + lambda: None) + + def foo(): + warnings.warn("foo", category=DeprecationWarning, stacklevel=2) + + test_case_instance.assert_deprecated(foo) + test_case_instance.teardown_method() + + +class TestNonNumericConjugate(_DeprecationTestCase): + """ + Deprecate no-op behavior of ndarray.conjugate on non-numeric dtypes, + which conflicts with the error behavior of np.conjugate. + """ + def test_conjugate(self): + for a in np.array(5), np.array(5j): + self.assert_not_deprecated(a.conjugate) + for a in (np.array('s'), np.array('2016', 'M'), + np.array((1, 2), [('a', int), ('b', int)])): + self.assert_deprecated(a.conjugate) + + +class TestDatetimeEvent(_DeprecationTestCase): + # 2017-08-11, 1.14.0 + def test_3_tuple(self): + for cls in (np.datetime64, np.timedelta64): + # two valid uses - (unit, num) and (unit, num, den, None) + self.assert_not_deprecated(cls, args=(1, ('ms', 2))) + self.assert_not_deprecated(cls, args=(1, ('ms', 2, 1, None))) + + # trying to use the event argument, removed in 1.7.0, is deprecated + # it used to be a uint8 + self.assert_deprecated(cls, args=(1, ('ms', 2, 'event'))) + self.assert_deprecated(cls, args=(1, ('ms', 2, 63))) + self.assert_deprecated(cls, args=(1, ('ms', 2, 1, 'event'))) + self.assert_deprecated(cls, args=(1, ('ms', 2, 1, 63))) + + +class TestTruthTestingEmptyArrays(_DeprecationTestCase): + # 2017-09-25, 1.14.0 + message = '.*truth value of an empty array is ambiguous.*' + + def test_1d(self): + self.assert_deprecated(bool, args=(np.array([]),)) + + def test_2d(self): + self.assert_deprecated(bool, args=(np.zeros((1, 0)),)) + self.assert_deprecated(bool, args=(np.zeros((0, 1)),)) + self.assert_deprecated(bool, args=(np.zeros((0, 0)),)) + + +class TestBincount(_DeprecationTestCase): + # 2017-06-01, 1.14.0 + def test_bincount_minlength(self): + self.assert_deprecated(lambda: np.bincount([1, 2, 3], minlength=None)) + + + +class TestGeneratorSum(_DeprecationTestCase): + # 2018-02-25, 1.15.0 + def test_generator_sum(self): + self.assert_deprecated(np.sum, args=((i for i in range(5)),)) + + +class TestFromstring(_DeprecationTestCase): + # 2017-10-19, 1.14 + def test_fromstring(self): + self.assert_deprecated(np.fromstring, args=('\x00'*80,)) + + +class TestFromStringAndFileInvalidData(_DeprecationTestCase): + # 2019-06-08, 1.17.0 + # Tests should be moved to real tests when deprecation is done. + message = "string or file could not be read to its end" + + @pytest.mark.parametrize("invalid_str", [",invalid_data", "invalid_sep"]) + def test_deprecate_unparsable_data_file(self, invalid_str): + x = np.array([1.51, 2, 3.51, 4], dtype=float) + + with tempfile.TemporaryFile(mode="w") as f: + x.tofile(f, sep=',', format='%.2f') + f.write(invalid_str) + + f.seek(0) + self.assert_deprecated(lambda: np.fromfile(f, sep=",")) + f.seek(0) + self.assert_deprecated(lambda: np.fromfile(f, sep=",", count=5)) + # Should not raise: + with warnings.catch_warnings(): + warnings.simplefilter("error", DeprecationWarning) + f.seek(0) + res = np.fromfile(f, sep=",", count=4) + assert_array_equal(res, x) + + @pytest.mark.parametrize("invalid_str", [",invalid_data", "invalid_sep"]) + def test_deprecate_unparsable_string(self, invalid_str): + x = np.array([1.51, 2, 3.51, 4], dtype=float) + x_str = "1.51,2,3.51,4{}".format(invalid_str) + + self.assert_deprecated(lambda: np.fromstring(x_str, sep=",")) + self.assert_deprecated(lambda: np.fromstring(x_str, sep=",", count=5)) + + # The C-level API can use not fixed size, but 0 terminated strings, + # so test that as well: + bytestr = x_str.encode("ascii") + self.assert_deprecated(lambda: fromstring_null_term_c_api(bytestr)) + + with assert_warns(DeprecationWarning): + # this is slightly strange, in that fromstring leaves data + # potentially uninitialized (would be good to error when all is + # read, but count is larger then actual data maybe). + res = np.fromstring(x_str, sep=",", count=5) + assert_array_equal(res[:-1], x) + + with warnings.catch_warnings(): + warnings.simplefilter("error", DeprecationWarning) + + # Should not raise: + res = np.fromstring(x_str, sep=",", count=4) + assert_array_equal(res, x) + + +class TestNonZero(_DeprecationTestCase): + # 2019-05-26, 1.17.0 + def test_zerod(self): + self.assert_deprecated(lambda: np.nonzero(np.array(0))) + self.assert_deprecated(lambda: np.nonzero(np.array(1))) + + +class TestToString(_DeprecationTestCase): + # 2020-03-06 1.19.0 + message = re.escape("tostring() is deprecated. Use tobytes() instead.") + + def test_tostring(self): + arr = np.array(list(b"test\xFF"), dtype=np.uint8) + self.assert_deprecated(arr.tostring) + + def test_tostring_matches_tobytes(self): + arr = np.array(list(b"test\xFF"), dtype=np.uint8) + b = arr.tobytes() + with assert_warns(DeprecationWarning): + s = arr.tostring() + assert s == b + + +class TestDTypeCoercion(_DeprecationTestCase): + # 2020-02-06 1.19.0 + message = "Converting .* to a dtype .*is deprecated" + deprecated_types = [ + # The builtin scalar super types: + np.generic, np.flexible, np.number, + np.inexact, np.floating, np.complexfloating, + np.integer, np.unsignedinteger, np.signedinteger, + # character is a deprecated S1 special case: + np.character, + ] + + def test_dtype_coercion(self): + for scalar_type in self.deprecated_types: + self.assert_deprecated(np.dtype, args=(scalar_type,)) + + def test_array_construction(self): + for scalar_type in self.deprecated_types: + self.assert_deprecated(np.array, args=([], scalar_type,)) + + def test_not_deprecated(self): + # All specific types are not deprecated: + for group in np._core.sctypes.values(): + for scalar_type in group: + self.assert_not_deprecated(np.dtype, args=(scalar_type,)) + + for scalar_type in [type, dict, list, tuple]: + # Typical python types are coerced to object currently: + self.assert_not_deprecated(np.dtype, args=(scalar_type,)) + + +class BuiltInRoundComplexDType(_DeprecationTestCase): + # 2020-03-31 1.19.0 + deprecated_types = [np.csingle, np.cdouble, np.clongdouble] + not_deprecated_types = [ + np.int8, np.int16, np.int32, np.int64, + np.uint8, np.uint16, np.uint32, np.uint64, + np.float16, np.float32, np.float64, + ] + + def test_deprecated(self): + for scalar_type in self.deprecated_types: + scalar = scalar_type(0) + self.assert_deprecated(round, args=(scalar,)) + self.assert_deprecated(round, args=(scalar, 0)) + self.assert_deprecated(round, args=(scalar,), kwargs={'ndigits': 0}) + + def test_not_deprecated(self): + for scalar_type in self.not_deprecated_types: + scalar = scalar_type(0) + self.assert_not_deprecated(round, args=(scalar,)) + self.assert_not_deprecated(round, args=(scalar, 0)) + self.assert_not_deprecated(round, args=(scalar,), kwargs={'ndigits': 0}) + + +class TestIncorrectAdvancedIndexWithEmptyResult(_DeprecationTestCase): + # 2020-05-27, NumPy 1.20.0 + message = "Out of bound index found. This was previously ignored.*" + + @pytest.mark.parametrize("index", [([3, 0],), ([0, 0], [3, 0])]) + def test_empty_subspace(self, index): + # Test for both a single and two/multiple advanced indices. These + # This will raise an IndexError in the future. + arr = np.ones((2, 2, 0)) + self.assert_deprecated(arr.__getitem__, args=(index,)) + self.assert_deprecated(arr.__setitem__, args=(index, 0.)) + + # for this array, the subspace is only empty after applying the slice + arr2 = np.ones((2, 2, 1)) + index2 = (slice(0, 0),) + index + self.assert_deprecated(arr2.__getitem__, args=(index2,)) + self.assert_deprecated(arr2.__setitem__, args=(index2, 0.)) + + def test_empty_index_broadcast_not_deprecated(self): + arr = np.ones((2, 2, 2)) + + index = ([[3], [2]], []) # broadcast to an empty result. + self.assert_not_deprecated(arr.__getitem__, args=(index,)) + self.assert_not_deprecated(arr.__setitem__, + args=(index, np.empty((2, 0, 2)))) + + +class TestNonExactMatchDeprecation(_DeprecationTestCase): + # 2020-04-22 + def test_non_exact_match(self): + arr = np.array([[3, 6, 6], [4, 5, 1]]) + # misspelt mode check + self.assert_deprecated(lambda: np.ravel_multi_index(arr, (7, 6), mode='Cilp')) + # using completely different word with first character as R + self.assert_deprecated(lambda: np.searchsorted(arr[0], 4, side='Random')) + + +class TestMatrixInOuter(_DeprecationTestCase): + # 2020-05-13 NumPy 1.20.0 + message = (r"add.outer\(\) was passed a numpy matrix as " + r"(first|second) argument.") + + def test_deprecated(self): + arr = np.array([1, 2, 3]) + m = np.array([1, 2, 3]).view(np.matrix) + self.assert_deprecated(np.add.outer, args=(m, m), num=2) + self.assert_deprecated(np.add.outer, args=(arr, m)) + self.assert_deprecated(np.add.outer, args=(m, arr)) + self.assert_not_deprecated(np.add.outer, args=(arr, arr)) + + +class FlatteningConcatenateUnsafeCast(_DeprecationTestCase): + # NumPy 1.20, 2020-09-03 + message = "concatenate with `axis=None` will use same-kind casting" + + def test_deprecated(self): + self.assert_deprecated(np.concatenate, + args=(([0.], [1.]),), + kwargs=dict(axis=None, out=np.empty(2, dtype=np.int64))) + + def test_not_deprecated(self): + self.assert_not_deprecated(np.concatenate, + args=(([0.], [1.]),), + kwargs={'axis': None, 'out': np.empty(2, dtype=np.int64), + 'casting': "unsafe"}) + + with assert_raises(TypeError): + # Tests should notice if the deprecation warning is given first... + np.concatenate(([0.], [1.]), out=np.empty(2, dtype=np.int64), + casting="same_kind") + + +class TestDeprecatedUnpickleObjectScalar(_DeprecationTestCase): + # Deprecated 2020-11-24, NumPy 1.20 + """ + Technically, it should be impossible to create numpy object scalars, + but there was an unpickle path that would in theory allow it. That + path is invalid and must lead to the warning. + """ + message = "Unpickling a scalar with object dtype is deprecated." + + def test_deprecated(self): + ctor = np._core.multiarray.scalar + self.assert_deprecated(lambda: ctor(np.dtype("O"), 1)) + + +class TestSingleElementSignature(_DeprecationTestCase): + # Deprecated 2021-04-01, NumPy 1.21 + message = r"The use of a length 1" + + def test_deprecated(self): + self.assert_deprecated(lambda: np.add(1, 2, signature="d")) + self.assert_deprecated(lambda: np.add(1, 2, sig=(np.dtype("l"),))) + + +class TestCtypesGetter(_DeprecationTestCase): + # Deprecated 2021-05-18, Numpy 1.21.0 + warning_cls = DeprecationWarning + ctypes = np.array([1]).ctypes + + @pytest.mark.parametrize( + "name", ["get_data", "get_shape", "get_strides", "get_as_parameter"] + ) + def test_deprecated(self, name: str) -> None: + func = getattr(self.ctypes, name) + self.assert_deprecated(lambda: func()) + + @pytest.mark.parametrize( + "name", ["data", "shape", "strides", "_as_parameter_"] + ) + def test_not_deprecated(self, name: str) -> None: + self.assert_not_deprecated(lambda: getattr(self.ctypes, name)) + + +PARTITION_DICT = { + "partition method": np.arange(10).partition, + "argpartition method": np.arange(10).argpartition, + "partition function": lambda kth: np.partition(np.arange(10), kth), + "argpartition function": lambda kth: np.argpartition(np.arange(10), kth), +} + + +@pytest.mark.parametrize("func", PARTITION_DICT.values(), ids=PARTITION_DICT) +class TestPartitionBoolIndex(_DeprecationTestCase): + # Deprecated 2021-09-29, NumPy 1.22 + warning_cls = DeprecationWarning + message = "Passing booleans as partition index is deprecated" + + def test_deprecated(self, func): + self.assert_deprecated(lambda: func(True)) + self.assert_deprecated(lambda: func([False, True])) + + def test_not_deprecated(self, func): + self.assert_not_deprecated(lambda: func(1)) + self.assert_not_deprecated(lambda: func([0, 1])) + + +class TestMachAr(_DeprecationTestCase): + # Deprecated 2022-11-22, NumPy 1.25 + warning_cls = DeprecationWarning + + def test_deprecated_module(self): + self.assert_deprecated(lambda: getattr(np._core, "MachAr")) + + +class TestQuantileInterpolationDeprecation(_DeprecationTestCase): + # Deprecated 2021-11-08, NumPy 1.22 + @pytest.mark.parametrize("func", + [np.percentile, np.quantile, np.nanpercentile, np.nanquantile]) + def test_deprecated(self, func): + self.assert_deprecated( + lambda: func([0., 1.], 0., interpolation="linear")) + self.assert_deprecated( + lambda: func([0., 1.], 0., interpolation="nearest")) + + @pytest.mark.parametrize("func", + [np.percentile, np.quantile, np.nanpercentile, np.nanquantile]) + def test_both_passed(self, func): + with warnings.catch_warnings(): + # catch the DeprecationWarning so that it does not raise: + warnings.simplefilter("always", DeprecationWarning) + with pytest.raises(TypeError): + func([0., 1.], 0., interpolation="nearest", method="nearest") + + +class TestArrayFinalizeNone(_DeprecationTestCase): + message = "Setting __array_finalize__ = None" + + def test_use_none_is_deprecated(self): + # Deprecated way that ndarray itself showed nothing needs finalizing. + class NoFinalize(np.ndarray): + __array_finalize__ = None + + self.assert_deprecated(lambda: np.array(1).view(NoFinalize)) + + +class TestLoadtxtParseIntsViaFloat(_DeprecationTestCase): + # Deprecated 2022-07-03, NumPy 1.23 + # This test can be removed without replacement after the deprecation. + # The tests: + # * numpy/lib/tests/test_loadtxt.py::test_integer_signs + # * lib/tests/test_loadtxt.py::test_implicit_cast_float_to_int_fails + # Have a warning filter that needs to be removed. + message = r"loadtxt\(\): Parsing an integer via a float is deprecated.*" + + @pytest.mark.parametrize("dtype", np.typecodes["AllInteger"]) + def test_deprecated_warning(self, dtype): + with pytest.warns(DeprecationWarning, match=self.message): + np.loadtxt(["10.5"], dtype=dtype) + + @pytest.mark.parametrize("dtype", np.typecodes["AllInteger"]) + def test_deprecated_raised(self, dtype): + # The DeprecationWarning is chained when raised, so test manually: + with warnings.catch_warnings(): + warnings.simplefilter("error", DeprecationWarning) + try: + np.loadtxt(["10.5"], dtype=dtype) + except ValueError as e: + assert isinstance(e.__cause__, DeprecationWarning) + + +class TestScalarConversion(_DeprecationTestCase): + # 2023-01-02, 1.25.0 + def test_float_conversion(self): + self.assert_deprecated(float, args=(np.array([3.14]),)) + + def test_behaviour(self): + b = np.array([[3.14]]) + c = np.zeros(5) + with pytest.warns(DeprecationWarning): + c[0] = b + + +class TestPyIntConversion(_DeprecationTestCase): + message = r".*stop allowing conversion of out-of-bound.*" + + @pytest.mark.parametrize("dtype", np.typecodes["AllInteger"]) + def test_deprecated_scalar(self, dtype): + dtype = np.dtype(dtype) + info = np.iinfo(dtype) + + # Cover the most common creation paths (all end up in the + # same place): + def scalar(value, dtype): + dtype.type(value) + + def assign(value, dtype): + arr = np.array([0, 0, 0], dtype=dtype) + arr[2] = value + + def create(value, dtype): + np.array([value], dtype=dtype) + + for creation_func in [scalar, assign, create]: + try: + self.assert_deprecated( + lambda: creation_func(info.min - 1, dtype)) + except OverflowError: + pass # OverflowErrors always happened also before and are OK. + + try: + self.assert_deprecated( + lambda: creation_func(info.max + 1, dtype)) + except OverflowError: + pass # OverflowErrors always happened also before and are OK. + + +@pytest.mark.parametrize("name", ["str", "bytes", "object"]) +def test_future_scalar_attributes(name): + # FutureWarning added 2022-11-17, NumPy 1.24, + assert name not in dir(np) # we may want to not add them + with pytest.warns(FutureWarning, + match=f"In the future .*{name}"): + assert not hasattr(np, name) + + # Unfortunately, they are currently still valid via `np.dtype()` + np.dtype(name) + name in np._core.sctypeDict + + +# Ignore the above future attribute warning for this test. +@pytest.mark.filterwarnings("ignore:In the future:FutureWarning") +class TestRemovedGlobals: + # Removed 2023-01-12, NumPy 1.24.0 + # Not a deprecation, but the large error was added to aid those who missed + # the previous deprecation, and should be removed similarly to one + # (or faster). + @pytest.mark.parametrize("name", + ["object", "float", "complex", "str", "int"]) + def test_attributeerror_includes_info(self, name): + msg = f".*\n`np.{name}` was a deprecated alias for the builtin" + with pytest.raises(AttributeError, match=msg): + getattr(np, name) + + +class TestDeprecatedFinfo(_DeprecationTestCase): + # Deprecated in NumPy 1.25, 2023-01-16 + def test_deprecated_none(self): + self.assert_deprecated(np.finfo, args=(None,)) + + +class TestMathAlias(_DeprecationTestCase): + def test_deprecated_np_lib_math(self): + self.assert_deprecated(lambda: np.lib.math) + + +class TestLibImports(_DeprecationTestCase): + # Deprecated in Numpy 1.26.0, 2023-09 + def test_lib_functions_deprecation_call(self): + from numpy.lib._utils_impl import safe_eval + from numpy.lib._npyio_impl import recfromcsv, recfromtxt + from numpy.lib._function_base_impl import disp + from numpy.lib._shape_base_impl import get_array_wrap + from numpy._core.numerictypes import maximum_sctype + from numpy.lib.tests.test_io import TextIO + from numpy import in1d, row_stack, trapz + + self.assert_deprecated(lambda: safe_eval("None")) + + data_gen = lambda: TextIO('A,B\n0,1\n2,3') + kwargs = dict(delimiter=",", missing_values="N/A", names=True) + self.assert_deprecated(lambda: recfromcsv(data_gen())) + self.assert_deprecated(lambda: recfromtxt(data_gen(), **kwargs)) + + self.assert_deprecated(lambda: disp("test")) + self.assert_deprecated(lambda: get_array_wrap()) + self.assert_deprecated(lambda: maximum_sctype(int)) + + self.assert_deprecated(lambda: in1d([1], [1])) + self.assert_deprecated(lambda: row_stack([[]])) + self.assert_deprecated(lambda: trapz([1], [1])) + self.assert_deprecated(lambda: np.chararray) + + +class TestDeprecatedDTypeAliases(_DeprecationTestCase): + + def _check_for_warning(self, func): + with warnings.catch_warnings(record=True) as caught_warnings: + func() + assert len(caught_warnings) == 1 + w = caught_warnings[0] + assert w.category is DeprecationWarning + assert "alias 'a' was deprecated in NumPy 2.0" in str(w.message) + + def test_a_dtype_alias(self): + for dtype in ["a", "a10"]: + f = lambda: np.dtype(dtype) + self._check_for_warning(f) + self.assert_deprecated(f) + f = lambda: np.array(["hello", "world"]).astype("a10") + self._check_for_warning(f) + self.assert_deprecated(f) + + +class TestDeprecatedArrayWrap(_DeprecationTestCase): + message = "__array_wrap__.*" + + def test_deprecated(self): + class Test1: + def __array__(self, dtype=None, copy=None): + return np.arange(4) + + def __array_wrap__(self, arr, context=None): + self.called = True + return 'pass context' + + class Test2(Test1): + def __array_wrap__(self, arr): + self.called = True + return 'pass' + + test1 = Test1() + test2 = Test2() + self.assert_deprecated(lambda: np.negative(test1)) + assert test1.called + self.assert_deprecated(lambda: np.negative(test2)) + assert test2.called + + + +class TestDeprecatedDTypeParenthesizedRepeatCount(_DeprecationTestCase): + message = "Passing in a parenthesized single number" + + @pytest.mark.parametrize("string", ["(2)i,", "(3)3S,", "f,(2)f"]) + def test_parenthesized_repeat_count(self, string): + self.assert_deprecated(np.dtype, args=(string,)) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_dlpack.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_dlpack.py new file mode 100644 index 0000000000000000000000000000000000000000..da648fd36afbca7c245ee6400b9b2fde67273428 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_dlpack.py @@ -0,0 +1,124 @@ +import sys +import pytest + +import numpy as np +from numpy.testing import assert_array_equal, IS_PYPY + + +class TestDLPack: + @pytest.mark.skipif(IS_PYPY, reason="PyPy can't get refcounts.") + def test_dunder_dlpack_refcount(self): + x = np.arange(5) + y = x.__dlpack__() + assert sys.getrefcount(x) == 3 + del y + assert sys.getrefcount(x) == 2 + + def test_dunder_dlpack_stream(self): + x = np.arange(5) + x.__dlpack__(stream=None) + + with pytest.raises(RuntimeError): + x.__dlpack__(stream=1) + + def test_strides_not_multiple_of_itemsize(self): + dt = np.dtype([('int', np.int32), ('char', np.int8)]) + y = np.zeros((5,), dtype=dt) + z = y['int'] + + with pytest.raises(BufferError): + np.from_dlpack(z) + + @pytest.mark.skipif(IS_PYPY, reason="PyPy can't get refcounts.") + def test_from_dlpack_refcount(self): + x = np.arange(5) + y = np.from_dlpack(x) + assert sys.getrefcount(x) == 3 + del y + assert sys.getrefcount(x) == 2 + + @pytest.mark.parametrize("dtype", [ + np.bool, + np.int8, np.int16, np.int32, np.int64, + np.uint8, np.uint16, np.uint32, np.uint64, + np.float16, np.float32, np.float64, + np.complex64, np.complex128 + ]) + def test_dtype_passthrough(self, dtype): + x = np.arange(5).astype(dtype) + y = np.from_dlpack(x) + + assert y.dtype == x.dtype + assert_array_equal(x, y) + + def test_invalid_dtype(self): + x = np.asarray(np.datetime64('2021-05-27')) + + with pytest.raises(BufferError): + np.from_dlpack(x) + + def test_invalid_byte_swapping(self): + dt = np.dtype('=i8').newbyteorder() + x = np.arange(5, dtype=dt) + + with pytest.raises(BufferError): + np.from_dlpack(x) + + def test_non_contiguous(self): + x = np.arange(25).reshape((5, 5)) + + y1 = x[0] + assert_array_equal(y1, np.from_dlpack(y1)) + + y2 = x[:, 0] + assert_array_equal(y2, np.from_dlpack(y2)) + + y3 = x[1, :] + assert_array_equal(y3, np.from_dlpack(y3)) + + y4 = x[1] + assert_array_equal(y4, np.from_dlpack(y4)) + + y5 = np.diagonal(x).copy() + assert_array_equal(y5, np.from_dlpack(y5)) + + @pytest.mark.parametrize("ndim", range(33)) + def test_higher_dims(self, ndim): + shape = (1,) * ndim + x = np.zeros(shape, dtype=np.float64) + + assert shape == np.from_dlpack(x).shape + + def test_dlpack_device(self): + x = np.arange(5) + assert x.__dlpack_device__() == (1, 0) + y = np.from_dlpack(x) + assert y.__dlpack_device__() == (1, 0) + z = y[::2] + assert z.__dlpack_device__() == (1, 0) + + def dlpack_deleter_exception(self): + x = np.arange(5) + _ = x.__dlpack__() + raise RuntimeError + + def test_dlpack_destructor_exception(self): + with pytest.raises(RuntimeError): + self.dlpack_deleter_exception() + + def test_readonly(self): + x = np.arange(5) + x.flags.writeable = False + with pytest.raises(BufferError): + x.__dlpack__() + + def test_ndim0(self): + x = np.array(1.0) + y = np.from_dlpack(x) + assert_array_equal(x, y) + + def test_size1dims_arrays(self): + x = np.ndarray(dtype='f8', shape=(10, 5, 1), strides=(8, 80, 4), + buffer=np.ones(1000, dtype=np.uint8), order='F') + y = np.from_dlpack(x) + assert_array_equal(x, y) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_dtype.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_dtype.py new file mode 100644 index 0000000000000000000000000000000000000000..73e02a84e2e8a595c1bcf425b463ab0d7c93d606 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_dtype.py @@ -0,0 +1,1983 @@ +import sys +import operator +import pytest +import ctypes +import gc +import types +from typing import Any +import pickle + +import numpy as np +import numpy.dtypes +from numpy._core._rational_tests import rational +from numpy._core._multiarray_tests import create_custom_field_dtype +from numpy.testing import ( + assert_, assert_equal, assert_array_equal, assert_raises, HAS_REFCOUNT, + IS_PYSTON, _OLD_PROMOTION) +from itertools import permutations +import random + +import hypothesis +from hypothesis.extra import numpy as hynp + + + +def assert_dtype_equal(a, b): + assert_equal(a, b) + assert_equal(hash(a), hash(b), + "two equivalent types do not hash to the same value !") + +def assert_dtype_not_equal(a, b): + assert_(a != b) + assert_(hash(a) != hash(b), + "two different types hash to the same value !") + +class TestBuiltin: + @pytest.mark.parametrize('t', [int, float, complex, np.int32, str, object]) + def test_run(self, t): + """Only test hash runs at all.""" + dt = np.dtype(t) + hash(dt) + + @pytest.mark.parametrize('t', [int, float]) + def test_dtype(self, t): + # Make sure equivalent byte order char hash the same (e.g. < and = on + # little endian) + dt = np.dtype(t) + dt2 = dt.newbyteorder("<") + dt3 = dt.newbyteorder(">") + if dt == dt2: + assert_(dt.byteorder != dt2.byteorder, "bogus test") + assert_dtype_equal(dt, dt2) + else: + assert_(dt.byteorder != dt3.byteorder, "bogus test") + assert_dtype_equal(dt, dt3) + + def test_equivalent_dtype_hashing(self): + # Make sure equivalent dtypes with different type num hash equal + uintp = np.dtype(np.uintp) + if uintp.itemsize == 4: + left = uintp + right = np.dtype(np.uint32) + else: + left = uintp + right = np.dtype(np.ulonglong) + assert_(left == right) + assert_(hash(left) == hash(right)) + + def test_invalid_types(self): + # Make sure invalid type strings raise an error + + assert_raises(TypeError, np.dtype, 'O3') + assert_raises(TypeError, np.dtype, 'O5') + assert_raises(TypeError, np.dtype, 'O7') + assert_raises(TypeError, np.dtype, 'b3') + assert_raises(TypeError, np.dtype, 'h4') + assert_raises(TypeError, np.dtype, 'I5') + assert_raises(TypeError, np.dtype, 'e3') + assert_raises(TypeError, np.dtype, 'f5') + + if np.dtype('g').itemsize == 8 or np.dtype('g').itemsize == 16: + assert_raises(TypeError, np.dtype, 'g12') + elif np.dtype('g').itemsize == 12: + assert_raises(TypeError, np.dtype, 'g16') + + if np.dtype('l').itemsize == 8: + assert_raises(TypeError, np.dtype, 'l4') + assert_raises(TypeError, np.dtype, 'L4') + else: + assert_raises(TypeError, np.dtype, 'l8') + assert_raises(TypeError, np.dtype, 'L8') + + if np.dtype('q').itemsize == 8: + assert_raises(TypeError, np.dtype, 'q4') + assert_raises(TypeError, np.dtype, 'Q4') + else: + assert_raises(TypeError, np.dtype, 'q8') + assert_raises(TypeError, np.dtype, 'Q8') + + # Make sure negative-sized dtype raises an error + assert_raises(TypeError, np.dtype, 'S-1') + assert_raises(TypeError, np.dtype, 'U-1') + assert_raises(TypeError, np.dtype, 'V-1') + + def test_richcompare_invalid_dtype_equality(self): + # Make sure objects that cannot be converted to valid + # dtypes results in False/True when compared to valid dtypes. + # Here 7 cannot be converted to dtype. No exceptions should be raised + + assert not np.dtype(np.int32) == 7, "dtype richcompare failed for ==" + assert np.dtype(np.int32) != 7, "dtype richcompare failed for !=" + + @pytest.mark.parametrize( + 'operation', + [operator.le, operator.lt, operator.ge, operator.gt]) + def test_richcompare_invalid_dtype_comparison(self, operation): + # Make sure TypeError is raised for comparison operators + # for invalid dtypes. Here 7 is an invalid dtype. + + with pytest.raises(TypeError): + operation(np.dtype(np.int32), 7) + + @pytest.mark.parametrize("dtype", + ['Bool', 'Bytes0', 'Complex32', 'Complex64', + 'Datetime64', 'Float16', 'Float32', 'Float64', + 'Int8', 'Int16', 'Int32', 'Int64', + 'Object0', 'Str0', 'Timedelta64', + 'UInt8', 'UInt16', 'Uint32', 'UInt32', + 'Uint64', 'UInt64', 'Void0', + "Float128", "Complex128"]) + def test_numeric_style_types_are_invalid(self, dtype): + with assert_raises(TypeError): + np.dtype(dtype) + + def test_expired_dtypes_with_bad_bytesize(self): + match: str = r".*removed in NumPy 2.0.*" + with pytest.raises(TypeError, match=match): + np.dtype("int0") + with pytest.raises(TypeError, match=match): + np.dtype("uint0") + with pytest.raises(TypeError, match=match): + np.dtype("bool8") + with pytest.raises(TypeError, match=match): + np.dtype("bytes0") + with pytest.raises(TypeError, match=match): + np.dtype("str0") + with pytest.raises(TypeError, match=match): + np.dtype("object0") + with pytest.raises(TypeError, match=match): + np.dtype("void0") + + @pytest.mark.parametrize( + 'value', + ['m8', 'M8', 'datetime64', 'timedelta64', + 'i4, (2,3)f8, f4', 'S3, 3u8, (3,4)S10', + '>f', '= (3, 12), + reason="Python 3.12 has immortal refcounts, this test will no longer " + "work. See gh-23986" +) +@pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") +class TestStructuredObjectRefcounting: + """These tests cover various uses of complicated structured types which + include objects and thus require reference counting. + """ + @pytest.mark.parametrize(['dt', 'pat', 'count', 'singleton'], + iter_struct_object_dtypes()) + @pytest.mark.parametrize(["creation_func", "creation_obj"], [ + pytest.param(np.empty, None, + # None is probably used for too many things + marks=pytest.mark.skip("unreliable due to python's behaviour")), + (np.ones, 1), + (np.zeros, 0)]) + def test_structured_object_create_delete(self, dt, pat, count, singleton, + creation_func, creation_obj): + """Structured object reference counting in creation and deletion""" + # The test assumes that 0, 1, and None are singletons. + gc.collect() + before = sys.getrefcount(creation_obj) + arr = creation_func(3, dt) + + now = sys.getrefcount(creation_obj) + assert now - before == count * 3 + del arr + now = sys.getrefcount(creation_obj) + assert now == before + + @pytest.mark.parametrize(['dt', 'pat', 'count', 'singleton'], + iter_struct_object_dtypes()) + def test_structured_object_item_setting(self, dt, pat, count, singleton): + """Structured object reference counting for simple item setting""" + one = 1 + + gc.collect() + before = sys.getrefcount(singleton) + arr = np.array([pat] * 3, dt) + assert sys.getrefcount(singleton) - before == count * 3 + # Fill with `1` and check that it was replaced correctly: + before2 = sys.getrefcount(one) + arr[...] = one + after2 = sys.getrefcount(one) + assert after2 - before2 == count * 3 + del arr + gc.collect() + assert sys.getrefcount(one) == before2 + assert sys.getrefcount(singleton) == before + + @pytest.mark.parametrize(['dt', 'pat', 'count', 'singleton'], + iter_struct_object_dtypes()) + @pytest.mark.parametrize( + ['shape', 'index', 'items_changed'], + [((3,), ([0, 2],), 2), + ((3, 2), ([0, 2], slice(None)), 4), + ((3, 2), ([0, 2], [1]), 2), + ((3,), ([True, False, True]), 2)]) + def test_structured_object_indexing(self, shape, index, items_changed, + dt, pat, count, singleton): + """Structured object reference counting for advanced indexing.""" + # Use two small negative values (should be singletons, but less likely + # to run into race-conditions). This failed in some threaded envs + # When using 0 and 1. If it fails again, should remove all explicit + # checks, and rely on `pytest-leaks` reference count checker only. + val0 = -4 + val1 = -5 + + arr = np.full(shape, val0, dt) + + gc.collect() + before_val0 = sys.getrefcount(val0) + before_val1 = sys.getrefcount(val1) + # Test item getting: + part = arr[index] + after_val0 = sys.getrefcount(val0) + assert after_val0 - before_val0 == count * items_changed + del part + # Test item setting: + arr[index] = val1 + gc.collect() + after_val0 = sys.getrefcount(val0) + after_val1 = sys.getrefcount(val1) + assert before_val0 - after_val0 == count * items_changed + assert after_val1 - before_val1 == count * items_changed + + @pytest.mark.parametrize(['dt', 'pat', 'count', 'singleton'], + iter_struct_object_dtypes()) + def test_structured_object_take_and_repeat(self, dt, pat, count, singleton): + """Structured object reference counting for specialized functions. + The older functions such as take and repeat use different code paths + then item setting (when writing this). + """ + indices = [0, 1] + + arr = np.array([pat] * 3, dt) + gc.collect() + before = sys.getrefcount(singleton) + res = arr.take(indices) + after = sys.getrefcount(singleton) + assert after - before == count * 2 + new = res.repeat(10) + gc.collect() + after_repeat = sys.getrefcount(singleton) + assert after_repeat - after == count * 2 * 10 + + +class TestStructuredDtypeSparseFields: + """Tests subarray fields which contain sparse dtypes so that + not all memory is used by the dtype work. Such dtype's should + leave the underlying memory unchanged. + """ + dtype = np.dtype([('a', {'names':['aa', 'ab'], 'formats':['f', 'f'], + 'offsets':[0, 4]}, (2, 3))]) + sparse_dtype = np.dtype([('a', {'names':['ab'], 'formats':['f'], + 'offsets':[4]}, (2, 3))]) + + def test_sparse_field_assignment(self): + arr = np.zeros(3, self.dtype) + sparse_arr = arr.view(self.sparse_dtype) + + sparse_arr[...] = np.finfo(np.float32).max + # dtype is reduced when accessing the field, so shape is (3, 2, 3): + assert_array_equal(arr["a"]["aa"], np.zeros((3, 2, 3))) + + def test_sparse_field_assignment_fancy(self): + # Fancy assignment goes to the copyswap function for complex types: + arr = np.zeros(3, self.dtype) + sparse_arr = arr.view(self.sparse_dtype) + + sparse_arr[[0, 1, 2]] = np.finfo(np.float32).max + # dtype is reduced when accessing the field, so shape is (3, 2, 3): + assert_array_equal(arr["a"]["aa"], np.zeros((3, 2, 3))) + + +class TestMonsterType: + """Test deeply nested subtypes.""" + + def test1(self): + simple1 = np.dtype({'names': ['r', 'b'], 'formats': ['u1', 'u1'], + 'titles': ['Red pixel', 'Blue pixel']}) + a = np.dtype([('yo', int), ('ye', simple1), + ('yi', np.dtype((int, (3, 2))))]) + b = np.dtype([('yo', int), ('ye', simple1), + ('yi', np.dtype((int, (3, 2))))]) + assert_dtype_equal(a, b) + + c = np.dtype([('yo', int), ('ye', simple1), + ('yi', np.dtype((a, (3, 2))))]) + d = np.dtype([('yo', int), ('ye', simple1), + ('yi', np.dtype((a, (3, 2))))]) + assert_dtype_equal(c, d) + + @pytest.mark.skipif(IS_PYSTON, reason="Pyston disables recursion checking") + def test_list_recursion(self): + l = list() + l.append(('f', l)) + with pytest.raises(RecursionError): + np.dtype(l) + + @pytest.mark.skipif(IS_PYSTON, reason="Pyston disables recursion checking") + def test_tuple_recursion(self): + d = np.int32 + for i in range(100000): + d = (d, (1,)) + with pytest.raises(RecursionError): + np.dtype(d) + + @pytest.mark.skipif(IS_PYSTON, reason="Pyston disables recursion checking") + def test_dict_recursion(self): + d = dict(names=['self'], formats=[None], offsets=[0]) + d['formats'][0] = d + with pytest.raises(RecursionError): + np.dtype(d) + + +class TestMetadata: + def test_no_metadata(self): + d = np.dtype(int) + assert_(d.metadata is None) + + def test_metadata_takes_dict(self): + d = np.dtype(int, metadata={'datum': 1}) + assert_(d.metadata == {'datum': 1}) + + def test_metadata_rejects_nondict(self): + assert_raises(TypeError, np.dtype, int, metadata='datum') + assert_raises(TypeError, np.dtype, int, metadata=1) + assert_raises(TypeError, np.dtype, int, metadata=None) + + def test_nested_metadata(self): + d = np.dtype([('a', np.dtype(int, metadata={'datum': 1}))]) + assert_(d['a'].metadata == {'datum': 1}) + + def test_base_metadata_copied(self): + d = np.dtype((np.void, np.dtype('i4,i4', metadata={'datum': 1}))) + assert_(d.metadata == {'datum': 1}) + +class TestString: + def test_complex_dtype_str(self): + dt = np.dtype([('top', [('tiles', ('>f4', (64, 64)), (1,)), + ('rtile', '>f4', (64, 36))], (3,)), + ('bottom', [('bleft', ('>f4', (8, 64)), (1,)), + ('bright', '>f4', (8, 36))])]) + assert_equal(str(dt), + "[('top', [('tiles', ('>f4', (64, 64)), (1,)), " + "('rtile', '>f4', (64, 36))], (3,)), " + "('bottom', [('bleft', ('>f4', (8, 64)), (1,)), " + "('bright', '>f4', (8, 36))])]") + + # If the sticky aligned flag is set to True, it makes the + # str() function use a dict representation with an 'aligned' flag + dt = np.dtype([('top', [('tiles', ('>f4', (64, 64)), (1,)), + ('rtile', '>f4', (64, 36))], + (3,)), + ('bottom', [('bleft', ('>f4', (8, 64)), (1,)), + ('bright', '>f4', (8, 36))])], + align=True) + assert_equal(str(dt), + "{'names': ['top', 'bottom']," + " 'formats': [([('tiles', ('>f4', (64, 64)), (1,)), " + "('rtile', '>f4', (64, 36))], (3,)), " + "[('bleft', ('>f4', (8, 64)), (1,)), " + "('bright', '>f4', (8, 36))]]," + " 'offsets': [0, 76800]," + " 'itemsize': 80000," + " 'aligned': True}") + with np.printoptions(legacy='1.21'): + assert_equal(str(dt), + "{'names':['top','bottom'], " + "'formats':[([('tiles', ('>f4', (64, 64)), (1,)), " + "('rtile', '>f4', (64, 36))], (3,))," + "[('bleft', ('>f4', (8, 64)), (1,)), " + "('bright', '>f4', (8, 36))]], " + "'offsets':[0,76800], " + "'itemsize':80000, " + "'aligned':True}") + assert_equal(np.dtype(eval(str(dt))), dt) + + dt = np.dtype({'names': ['r', 'g', 'b'], 'formats': ['u1', 'u1', 'u1'], + 'offsets': [0, 1, 2], + 'titles': ['Red pixel', 'Green pixel', 'Blue pixel']}) + assert_equal(str(dt), + "[(('Red pixel', 'r'), 'u1'), " + "(('Green pixel', 'g'), 'u1'), " + "(('Blue pixel', 'b'), 'u1')]") + + dt = np.dtype({'names': ['rgba', 'r', 'g', 'b'], + 'formats': ['f4', (64, 64)), (1,)), + ('rtile', '>f4', (64, 36))], (3,)), + ('bottom', [('bleft', ('>f4', (8, 64)), (1,)), + ('bright', '>f4', (8, 36))])]) + assert_equal(repr(dt), + "dtype([('top', [('tiles', ('>f4', (64, 64)), (1,)), " + "('rtile', '>f4', (64, 36))], (3,)), " + "('bottom', [('bleft', ('>f4', (8, 64)), (1,)), " + "('bright', '>f4', (8, 36))])])") + + dt = np.dtype({'names': ['r', 'g', 'b'], 'formats': ['u1', 'u1', 'u1'], + 'offsets': [0, 1, 2], + 'titles': ['Red pixel', 'Green pixel', 'Blue pixel']}, + align=True) + assert_equal(repr(dt), + "dtype([(('Red pixel', 'r'), 'u1'), " + "(('Green pixel', 'g'), 'u1'), " + "(('Blue pixel', 'b'), 'u1')], align=True)") + + def test_repr_structured_not_packed(self): + dt = np.dtype({'names': ['rgba', 'r', 'g', 'b'], + 'formats': ['i4") + assert np.result_type(dt).isnative + assert np.result_type(dt).num == dt.num + + # dtype with empty space: + struct_dt = np.dtype(">i4,i1,f4', (2, 1)), ('b', 'u4')]) + self.check(BigEndStruct, expected) + + def test_little_endian_structure_packed(self): + class LittleEndStruct(ctypes.LittleEndianStructure): + _fields_ = [ + ('one', ctypes.c_uint8), + ('two', ctypes.c_uint32) + ] + _pack_ = 1 + expected = np.dtype([('one', 'u1'), ('two', 'B'), + ('b', '>H') + ], align=True) + self.check(PaddedStruct, expected) + + def test_simple_endian_types(self): + self.check(ctypes.c_uint16.__ctype_le__, np.dtype('u2')) + self.check(ctypes.c_uint8.__ctype_le__, np.dtype('u1')) + self.check(ctypes.c_uint8.__ctype_be__, np.dtype('u1')) + + all_types = set(np.typecodes['All']) + all_pairs = permutations(all_types, 2) + + @pytest.mark.parametrize("pair", all_pairs) + def test_pairs(self, pair): + """ + Check that np.dtype('x,y') matches [np.dtype('x'), np.dtype('y')] + Example: np.dtype('d,I') -> dtype([('f0', ' None: + alias = np.dtype[Any] + assert isinstance(alias, types.GenericAlias) + assert alias.__origin__ is np.dtype + + @pytest.mark.parametrize("code", np.typecodes["All"]) + def test_dtype_subclass(self, code: str) -> None: + cls = type(np.dtype(code)) + alias = cls[Any] + assert isinstance(alias, types.GenericAlias) + assert alias.__origin__ is cls + + @pytest.mark.parametrize("arg_len", range(4)) + def test_subscript_tuple(self, arg_len: int) -> None: + arg_tup = (Any,) * arg_len + if arg_len == 1: + assert np.dtype[arg_tup] + else: + with pytest.raises(TypeError): + np.dtype[arg_tup] + + def test_subscript_scalar(self) -> None: + assert np.dtype[Any] + + +def test_result_type_integers_and_unitless_timedelta64(): + # Regression test for gh-20077. The following call of `result_type` + # would cause a seg. fault. + td = np.timedelta64(4) + result = np.result_type(0, td) + assert_dtype_equal(result, td.dtype) + + +def test_creating_dtype_with_dtype_class_errors(): + # Regression test for #25031, calling `np.dtype` with itself segfaulted. + with pytest.raises(TypeError, match="Cannot convert np.dtype into a"): + np.array(np.ones(10), dtype=np.dtype) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_einsum.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_einsum.py new file mode 100644 index 0000000000000000000000000000000000000000..55f2546185e75b50c1c1beda4e6cf8abcff4fcff --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_einsum.py @@ -0,0 +1,1252 @@ +import itertools +import sys +import platform + +import pytest + +import numpy as np +from numpy.testing import ( + assert_, assert_equal, assert_array_equal, assert_almost_equal, + assert_raises, suppress_warnings, assert_raises_regex, assert_allclose + ) + +try: + COMPILERS = np.show_config(mode="dicts")["Compilers"] + USING_CLANG_CL = COMPILERS["c"]["name"] == "clang-cl" +except TypeError: + USING_CLANG_CL = False + +# Setup for optimize einsum +chars = 'abcdefghij' +sizes = np.array([2, 3, 4, 5, 4, 3, 2, 6, 5, 4, 3]) +global_size_dict = dict(zip(chars, sizes)) + + +class TestEinsum: + @pytest.mark.parametrize("do_opt", [True, False]) + @pytest.mark.parametrize("einsum_fn", [np.einsum, np.einsum_path]) + def test_einsum_errors(self, do_opt, einsum_fn): + # Need enough arguments + assert_raises(ValueError, einsum_fn, optimize=do_opt) + assert_raises(ValueError, einsum_fn, "", optimize=do_opt) + + # subscripts must be a string + assert_raises(TypeError, einsum_fn, 0, 0, optimize=do_opt) + + # issue 4528 revealed a segfault with this call + assert_raises(TypeError, einsum_fn, *(None,)*63, optimize=do_opt) + + # number of operands must match count in subscripts string + assert_raises(ValueError, einsum_fn, "", 0, 0, optimize=do_opt) + assert_raises(ValueError, einsum_fn, ",", 0, [0], [0], + optimize=do_opt) + assert_raises(ValueError, einsum_fn, ",", [0], optimize=do_opt) + + # can't have more subscripts than dimensions in the operand + assert_raises(ValueError, einsum_fn, "i", 0, optimize=do_opt) + assert_raises(ValueError, einsum_fn, "ij", [0, 0], optimize=do_opt) + assert_raises(ValueError, einsum_fn, "...i", 0, optimize=do_opt) + assert_raises(ValueError, einsum_fn, "i...j", [0, 0], optimize=do_opt) + assert_raises(ValueError, einsum_fn, "i...", 0, optimize=do_opt) + assert_raises(ValueError, einsum_fn, "ij...", [0, 0], optimize=do_opt) + + # invalid ellipsis + assert_raises(ValueError, einsum_fn, "i..", [0, 0], optimize=do_opt) + assert_raises(ValueError, einsum_fn, ".i...", [0, 0], optimize=do_opt) + assert_raises(ValueError, einsum_fn, "j->..j", [0, 0], optimize=do_opt) + assert_raises(ValueError, einsum_fn, "j->.j...", [0, 0], + optimize=do_opt) + + # invalid subscript character + assert_raises(ValueError, einsum_fn, "i%...", [0, 0], optimize=do_opt) + assert_raises(ValueError, einsum_fn, "...j$", [0, 0], optimize=do_opt) + assert_raises(ValueError, einsum_fn, "i->&", [0, 0], optimize=do_opt) + + # output subscripts must appear in input + assert_raises(ValueError, einsum_fn, "i->ij", [0, 0], optimize=do_opt) + + # output subscripts may only be specified once + assert_raises(ValueError, einsum_fn, "ij->jij", [[0, 0], [0, 0]], + optimize=do_opt) + + # dimensions must match when being collapsed + assert_raises(ValueError, einsum_fn, "ii", + np.arange(6).reshape(2, 3), optimize=do_opt) + assert_raises(ValueError, einsum_fn, "ii->i", + np.arange(6).reshape(2, 3), optimize=do_opt) + + with assert_raises_regex(ValueError, "'b'"): + # gh-11221 - 'c' erroneously appeared in the error message + a = np.ones((3, 3, 4, 5, 6)) + b = np.ones((3, 4, 5)) + einsum_fn('aabcb,abc', a, b) + + @pytest.mark.parametrize("do_opt", [True, False]) + def test_einsum_specific_errors(self, do_opt): + # out parameter must be an array + assert_raises(TypeError, np.einsum, "", 0, out='test', + optimize=do_opt) + + # order parameter must be a valid order + assert_raises(ValueError, np.einsum, "", 0, order='W', + optimize=do_opt) + + # casting parameter must be a valid casting + assert_raises(ValueError, np.einsum, "", 0, casting='blah', + optimize=do_opt) + + # dtype parameter must be a valid dtype + assert_raises(TypeError, np.einsum, "", 0, dtype='bad_data_type', + optimize=do_opt) + + # other keyword arguments are rejected + assert_raises(TypeError, np.einsum, "", 0, bad_arg=0, optimize=do_opt) + + # broadcasting to new dimensions must be enabled explicitly + assert_raises(ValueError, np.einsum, "i", np.arange(6).reshape(2, 3), + optimize=do_opt) + assert_raises(ValueError, np.einsum, "i->i", [[0, 1], [0, 1]], + out=np.arange(4).reshape(2, 2), optimize=do_opt) + + # Check order kwarg, asanyarray allows 1d to pass through + assert_raises(ValueError, np.einsum, "i->i", + np.arange(6).reshape(-1, 1), optimize=do_opt, order='d') + + def test_einsum_object_errors(self): + # Exceptions created by object arithmetic should + # successfully propagate + + class CustomException(Exception): + pass + + class DestructoBox: + + def __init__(self, value, destruct): + self._val = value + self._destruct = destruct + + def __add__(self, other): + tmp = self._val + other._val + if tmp >= self._destruct: + raise CustomException + else: + self._val = tmp + return self + + def __radd__(self, other): + if other == 0: + return self + else: + return self.__add__(other) + + def __mul__(self, other): + tmp = self._val * other._val + if tmp >= self._destruct: + raise CustomException + else: + self._val = tmp + return self + + def __rmul__(self, other): + if other == 0: + return self + else: + return self.__mul__(other) + + a = np.array([DestructoBox(i, 5) for i in range(1, 10)], + dtype='object').reshape(3, 3) + + # raised from unbuffered_loop_nop1_ndim2 + assert_raises(CustomException, np.einsum, "ij->i", a) + + # raised from unbuffered_loop_nop1_ndim3 + b = np.array([DestructoBox(i, 100) for i in range(0, 27)], + dtype='object').reshape(3, 3, 3) + assert_raises(CustomException, np.einsum, "i...k->...", b) + + # raised from unbuffered_loop_nop2_ndim2 + b = np.array([DestructoBox(i, 55) for i in range(1, 4)], + dtype='object') + assert_raises(CustomException, np.einsum, "ij, j", a, b) + + # raised from unbuffered_loop_nop2_ndim3 + assert_raises(CustomException, np.einsum, "ij, jh", a, a) + + # raised from PyArray_EinsteinSum + assert_raises(CustomException, np.einsum, "ij->", a) + + def test_einsum_views(self): + # pass-through + for do_opt in [True, False]: + a = np.arange(6) + a.shape = (2, 3) + + b = np.einsum("...", a, optimize=do_opt) + assert_(b.base is a) + + b = np.einsum(a, [Ellipsis], optimize=do_opt) + assert_(b.base is a) + + b = np.einsum("ij", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, a) + + b = np.einsum(a, [0, 1], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, a) + + # output is writeable whenever input is writeable + b = np.einsum("...", a, optimize=do_opt) + assert_(b.flags['WRITEABLE']) + a.flags['WRITEABLE'] = False + b = np.einsum("...", a, optimize=do_opt) + assert_(not b.flags['WRITEABLE']) + + # transpose + a = np.arange(6) + a.shape = (2, 3) + + b = np.einsum("ji", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, a.T) + + b = np.einsum(a, [1, 0], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, a.T) + + # diagonal + a = np.arange(9) + a.shape = (3, 3) + + b = np.einsum("ii->i", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a[i, i] for i in range(3)]) + + b = np.einsum(a, [0, 0], [0], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a[i, i] for i in range(3)]) + + # diagonal with various ways of broadcasting an additional dimension + a = np.arange(27) + a.shape = (3, 3, 3) + + b = np.einsum("...ii->...i", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [[x[i, i] for i in range(3)] for x in a]) + + b = np.einsum(a, [Ellipsis, 0, 0], [Ellipsis, 0], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [[x[i, i] for i in range(3)] for x in a]) + + b = np.einsum("ii...->...i", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [[x[i, i] for i in range(3)] + for x in a.transpose(2, 0, 1)]) + + b = np.einsum(a, [0, 0, Ellipsis], [Ellipsis, 0], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [[x[i, i] for i in range(3)] + for x in a.transpose(2, 0, 1)]) + + b = np.einsum("...ii->i...", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a[:, i, i] for i in range(3)]) + + b = np.einsum(a, [Ellipsis, 0, 0], [0, Ellipsis], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a[:, i, i] for i in range(3)]) + + b = np.einsum("jii->ij", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a[:, i, i] for i in range(3)]) + + b = np.einsum(a, [1, 0, 0], [0, 1], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a[:, i, i] for i in range(3)]) + + b = np.einsum("ii...->i...", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a.transpose(2, 0, 1)[:, i, i] for i in range(3)]) + + b = np.einsum(a, [0, 0, Ellipsis], [0, Ellipsis], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a.transpose(2, 0, 1)[:, i, i] for i in range(3)]) + + b = np.einsum("i...i->i...", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a.transpose(1, 0, 2)[:, i, i] for i in range(3)]) + + b = np.einsum(a, [0, Ellipsis, 0], [0, Ellipsis], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a.transpose(1, 0, 2)[:, i, i] for i in range(3)]) + + b = np.einsum("i...i->...i", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [[x[i, i] for i in range(3)] + for x in a.transpose(1, 0, 2)]) + + b = np.einsum(a, [0, Ellipsis, 0], [Ellipsis, 0], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [[x[i, i] for i in range(3)] + for x in a.transpose(1, 0, 2)]) + + # triple diagonal + a = np.arange(27) + a.shape = (3, 3, 3) + + b = np.einsum("iii->i", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a[i, i, i] for i in range(3)]) + + b = np.einsum(a, [0, 0, 0], [0], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, [a[i, i, i] for i in range(3)]) + + # swap axes + a = np.arange(24) + a.shape = (2, 3, 4) + + b = np.einsum("ijk->jik", a, optimize=do_opt) + assert_(b.base is a) + assert_equal(b, a.swapaxes(0, 1)) + + b = np.einsum(a, [0, 1, 2], [1, 0, 2], optimize=do_opt) + assert_(b.base is a) + assert_equal(b, a.swapaxes(0, 1)) + + @np._no_nep50_warning() + def check_einsum_sums(self, dtype, do_opt=False): + dtype = np.dtype(dtype) + # Check various sums. Does many sizes to exercise unrolled loops. + + # sum(a, axis=-1) + for n in range(1, 17): + a = np.arange(n, dtype=dtype) + b = np.sum(a, axis=-1) + if hasattr(b, 'astype'): + b = b.astype(dtype) + assert_equal(np.einsum("i->", a, optimize=do_opt), b) + assert_equal(np.einsum(a, [0], [], optimize=do_opt), b) + + for n in range(1, 17): + a = np.arange(2*3*n, dtype=dtype).reshape(2, 3, n) + b = np.sum(a, axis=-1) + if hasattr(b, 'astype'): + b = b.astype(dtype) + assert_equal(np.einsum("...i->...", a, optimize=do_opt), b) + assert_equal(np.einsum(a, [Ellipsis, 0], [Ellipsis], optimize=do_opt), b) + + # sum(a, axis=0) + for n in range(1, 17): + a = np.arange(2*n, dtype=dtype).reshape(2, n) + b = np.sum(a, axis=0) + if hasattr(b, 'astype'): + b = b.astype(dtype) + assert_equal(np.einsum("i...->...", a, optimize=do_opt), b) + assert_equal(np.einsum(a, [0, Ellipsis], [Ellipsis], optimize=do_opt), b) + + for n in range(1, 17): + a = np.arange(2*3*n, dtype=dtype).reshape(2, 3, n) + b = np.sum(a, axis=0) + if hasattr(b, 'astype'): + b = b.astype(dtype) + assert_equal(np.einsum("i...->...", a, optimize=do_opt), b) + assert_equal(np.einsum(a, [0, Ellipsis], [Ellipsis], optimize=do_opt), b) + + # trace(a) + for n in range(1, 17): + a = np.arange(n*n, dtype=dtype).reshape(n, n) + b = np.trace(a) + if hasattr(b, 'astype'): + b = b.astype(dtype) + assert_equal(np.einsum("ii", a, optimize=do_opt), b) + assert_equal(np.einsum(a, [0, 0], optimize=do_opt), b) + + # gh-15961: should accept numpy int64 type in subscript list + np_array = np.asarray([0, 0]) + assert_equal(np.einsum(a, np_array, optimize=do_opt), b) + assert_equal(np.einsum(a, list(np_array), optimize=do_opt), b) + + # multiply(a, b) + assert_equal(np.einsum("..., ...", 3, 4), 12) # scalar case + for n in range(1, 17): + a = np.arange(3 * n, dtype=dtype).reshape(3, n) + b = np.arange(2 * 3 * n, dtype=dtype).reshape(2, 3, n) + assert_equal(np.einsum("..., ...", a, b, optimize=do_opt), + np.multiply(a, b)) + assert_equal(np.einsum(a, [Ellipsis], b, [Ellipsis], optimize=do_opt), + np.multiply(a, b)) + + # inner(a,b) + for n in range(1, 17): + a = np.arange(2 * 3 * n, dtype=dtype).reshape(2, 3, n) + b = np.arange(n, dtype=dtype) + assert_equal(np.einsum("...i, ...i", a, b, optimize=do_opt), np.inner(a, b)) + assert_equal(np.einsum(a, [Ellipsis, 0], b, [Ellipsis, 0], optimize=do_opt), + np.inner(a, b)) + + for n in range(1, 11): + a = np.arange(n * 3 * 2, dtype=dtype).reshape(n, 3, 2) + b = np.arange(n, dtype=dtype) + assert_equal(np.einsum("i..., i...", a, b, optimize=do_opt), + np.inner(a.T, b.T).T) + assert_equal(np.einsum(a, [0, Ellipsis], b, [0, Ellipsis], optimize=do_opt), + np.inner(a.T, b.T).T) + + # outer(a,b) + for n in range(1, 17): + a = np.arange(3, dtype=dtype)+1 + b = np.arange(n, dtype=dtype)+1 + assert_equal(np.einsum("i,j", a, b, optimize=do_opt), + np.outer(a, b)) + assert_equal(np.einsum(a, [0], b, [1], optimize=do_opt), + np.outer(a, b)) + + # Suppress the complex warnings for the 'as f8' tests + with suppress_warnings() as sup: + sup.filter(np.exceptions.ComplexWarning) + + # matvec(a,b) / a.dot(b) where a is matrix, b is vector + for n in range(1, 17): + a = np.arange(4*n, dtype=dtype).reshape(4, n) + b = np.arange(n, dtype=dtype) + assert_equal(np.einsum("ij, j", a, b, optimize=do_opt), + np.dot(a, b)) + assert_equal(np.einsum(a, [0, 1], b, [1], optimize=do_opt), + np.dot(a, b)) + + c = np.arange(4, dtype=dtype) + np.einsum("ij,j", a, b, out=c, + dtype='f8', casting='unsafe', optimize=do_opt) + assert_equal(c, + np.dot(a.astype('f8'), + b.astype('f8')).astype(dtype)) + c[...] = 0 + np.einsum(a, [0, 1], b, [1], out=c, + dtype='f8', casting='unsafe', optimize=do_opt) + assert_equal(c, + np.dot(a.astype('f8'), + b.astype('f8')).astype(dtype)) + + for n in range(1, 17): + a = np.arange(4*n, dtype=dtype).reshape(4, n) + b = np.arange(n, dtype=dtype) + assert_equal(np.einsum("ji,j", a.T, b.T, optimize=do_opt), + np.dot(b.T, a.T)) + assert_equal(np.einsum(a.T, [1, 0], b.T, [1], optimize=do_opt), + np.dot(b.T, a.T)) + + c = np.arange(4, dtype=dtype) + np.einsum("ji,j", a.T, b.T, out=c, + dtype='f8', casting='unsafe', optimize=do_opt) + assert_equal(c, + np.dot(b.T.astype('f8'), + a.T.astype('f8')).astype(dtype)) + c[...] = 0 + np.einsum(a.T, [1, 0], b.T, [1], out=c, + dtype='f8', casting='unsafe', optimize=do_opt) + assert_equal(c, + np.dot(b.T.astype('f8'), + a.T.astype('f8')).astype(dtype)) + + # matmat(a,b) / a.dot(b) where a is matrix, b is matrix + for n in range(1, 17): + if n < 8 or dtype != 'f2': + a = np.arange(4*n, dtype=dtype).reshape(4, n) + b = np.arange(n*6, dtype=dtype).reshape(n, 6) + assert_equal(np.einsum("ij,jk", a, b, optimize=do_opt), + np.dot(a, b)) + assert_equal(np.einsum(a, [0, 1], b, [1, 2], optimize=do_opt), + np.dot(a, b)) + + for n in range(1, 17): + a = np.arange(4*n, dtype=dtype).reshape(4, n) + b = np.arange(n*6, dtype=dtype).reshape(n, 6) + c = np.arange(24, dtype=dtype).reshape(4, 6) + np.einsum("ij,jk", a, b, out=c, dtype='f8', casting='unsafe', + optimize=do_opt) + assert_equal(c, + np.dot(a.astype('f8'), + b.astype('f8')).astype(dtype)) + c[...] = 0 + np.einsum(a, [0, 1], b, [1, 2], out=c, + dtype='f8', casting='unsafe', optimize=do_opt) + assert_equal(c, + np.dot(a.astype('f8'), + b.astype('f8')).astype(dtype)) + + # matrix triple product (note this is not currently an efficient + # way to multiply 3 matrices) + a = np.arange(12, dtype=dtype).reshape(3, 4) + b = np.arange(20, dtype=dtype).reshape(4, 5) + c = np.arange(30, dtype=dtype).reshape(5, 6) + if dtype != 'f2': + assert_equal(np.einsum("ij,jk,kl", a, b, c, optimize=do_opt), + a.dot(b).dot(c)) + assert_equal(np.einsum(a, [0, 1], b, [1, 2], c, [2, 3], + optimize=do_opt), a.dot(b).dot(c)) + + d = np.arange(18, dtype=dtype).reshape(3, 6) + np.einsum("ij,jk,kl", a, b, c, out=d, + dtype='f8', casting='unsafe', optimize=do_opt) + tgt = a.astype('f8').dot(b.astype('f8')) + tgt = tgt.dot(c.astype('f8')).astype(dtype) + assert_equal(d, tgt) + + d[...] = 0 + np.einsum(a, [0, 1], b, [1, 2], c, [2, 3], out=d, + dtype='f8', casting='unsafe', optimize=do_opt) + tgt = a.astype('f8').dot(b.astype('f8')) + tgt = tgt.dot(c.astype('f8')).astype(dtype) + assert_equal(d, tgt) + + # tensordot(a, b) + if np.dtype(dtype) != np.dtype('f2'): + a = np.arange(60, dtype=dtype).reshape(3, 4, 5) + b = np.arange(24, dtype=dtype).reshape(4, 3, 2) + assert_equal(np.einsum("ijk, jil -> kl", a, b), + np.tensordot(a, b, axes=([1, 0], [0, 1]))) + assert_equal(np.einsum(a, [0, 1, 2], b, [1, 0, 3], [2, 3]), + np.tensordot(a, b, axes=([1, 0], [0, 1]))) + + c = np.arange(10, dtype=dtype).reshape(5, 2) + np.einsum("ijk,jil->kl", a, b, out=c, + dtype='f8', casting='unsafe', optimize=do_opt) + assert_equal(c, np.tensordot(a.astype('f8'), b.astype('f8'), + axes=([1, 0], [0, 1])).astype(dtype)) + c[...] = 0 + np.einsum(a, [0, 1, 2], b, [1, 0, 3], [2, 3], out=c, + dtype='f8', casting='unsafe', optimize=do_opt) + assert_equal(c, np.tensordot(a.astype('f8'), b.astype('f8'), + axes=([1, 0], [0, 1])).astype(dtype)) + + # logical_and(logical_and(a!=0, b!=0), c!=0) + neg_val = -2 if dtype.kind != "u" else np.iinfo(dtype).max - 1 + a = np.array([1, 3, neg_val, 0, 12, 13, 0, 1], dtype=dtype) + b = np.array([0, 3.5, 0., neg_val, 0, 1, 3, 12], dtype=dtype) + c = np.array([True, True, False, True, True, False, True, True]) + + assert_equal(np.einsum("i,i,i->i", a, b, c, + dtype='?', casting='unsafe', optimize=do_opt), + np.logical_and(np.logical_and(a != 0, b != 0), c != 0)) + assert_equal(np.einsum(a, [0], b, [0], c, [0], [0], + dtype='?', casting='unsafe'), + np.logical_and(np.logical_and(a != 0, b != 0), c != 0)) + + a = np.arange(9, dtype=dtype) + assert_equal(np.einsum(",i->", 3, a), 3*np.sum(a)) + assert_equal(np.einsum(3, [], a, [0], []), 3*np.sum(a)) + assert_equal(np.einsum("i,->", a, 3), 3*np.sum(a)) + assert_equal(np.einsum(a, [0], 3, [], []), 3*np.sum(a)) + + # Various stride0, contiguous, and SSE aligned variants + for n in range(1, 25): + a = np.arange(n, dtype=dtype) + if np.dtype(dtype).itemsize > 1: + assert_equal(np.einsum("...,...", a, a, optimize=do_opt), + np.multiply(a, a)) + assert_equal(np.einsum("i,i", a, a, optimize=do_opt), np.dot(a, a)) + assert_equal(np.einsum("i,->i", a, 2, optimize=do_opt), 2*a) + assert_equal(np.einsum(",i->i", 2, a, optimize=do_opt), 2*a) + assert_equal(np.einsum("i,->", a, 2, optimize=do_opt), 2*np.sum(a)) + assert_equal(np.einsum(",i->", 2, a, optimize=do_opt), 2*np.sum(a)) + + assert_equal(np.einsum("...,...", a[1:], a[:-1], optimize=do_opt), + np.multiply(a[1:], a[:-1])) + assert_equal(np.einsum("i,i", a[1:], a[:-1], optimize=do_opt), + np.dot(a[1:], a[:-1])) + assert_equal(np.einsum("i,->i", a[1:], 2, optimize=do_opt), 2*a[1:]) + assert_equal(np.einsum(",i->i", 2, a[1:], optimize=do_opt), 2*a[1:]) + assert_equal(np.einsum("i,->", a[1:], 2, optimize=do_opt), + 2*np.sum(a[1:])) + assert_equal(np.einsum(",i->", 2, a[1:], optimize=do_opt), + 2*np.sum(a[1:])) + + # An object array, summed as the data type + a = np.arange(9, dtype=object) + + b = np.einsum("i->", a, dtype=dtype, casting='unsafe') + assert_equal(b, np.sum(a)) + if hasattr(b, "dtype"): + # Can be a python object when dtype is object + assert_equal(b.dtype, np.dtype(dtype)) + + b = np.einsum(a, [0], [], dtype=dtype, casting='unsafe') + assert_equal(b, np.sum(a)) + if hasattr(b, "dtype"): + # Can be a python object when dtype is object + assert_equal(b.dtype, np.dtype(dtype)) + + # A case which was failing (ticket #1885) + p = np.arange(2) + 1 + q = np.arange(4).reshape(2, 2) + 3 + r = np.arange(4).reshape(2, 2) + 7 + assert_equal(np.einsum('z,mz,zm->', p, q, r), 253) + + # singleton dimensions broadcast (gh-10343) + p = np.ones((10,2)) + q = np.ones((1,2)) + assert_array_equal(np.einsum('ij,ij->j', p, q, optimize=True), + np.einsum('ij,ij->j', p, q, optimize=False)) + assert_array_equal(np.einsum('ij,ij->j', p, q, optimize=True), + [10.] * 2) + + # a blas-compatible contraction broadcasting case which was failing + # for optimize=True (ticket #10930) + x = np.array([2., 3.]) + y = np.array([4.]) + assert_array_equal(np.einsum("i, i", x, y, optimize=False), 20.) + assert_array_equal(np.einsum("i, i", x, y, optimize=True), 20.) + + # all-ones array was bypassing bug (ticket #10930) + p = np.ones((1, 5)) / 2 + q = np.ones((5, 5)) / 2 + for optimize in (True, False): + assert_array_equal(np.einsum("...ij,...jk->...ik", p, p, + optimize=optimize), + np.einsum("...ij,...jk->...ik", p, q, + optimize=optimize)) + assert_array_equal(np.einsum("...ij,...jk->...ik", p, q, + optimize=optimize), + np.full((1, 5), 1.25)) + + # Cases which were failing (gh-10899) + x = np.eye(2, dtype=dtype) + y = np.ones(2, dtype=dtype) + assert_array_equal(np.einsum("ji,i->", x, y, optimize=optimize), + [2.]) # contig_contig_outstride0_two + assert_array_equal(np.einsum("i,ij->", y, x, optimize=optimize), + [2.]) # stride0_contig_outstride0_two + assert_array_equal(np.einsum("ij,i->", x, y, optimize=optimize), + [2.]) # contig_stride0_outstride0_two + + def test_einsum_sums_int8(self): + if ( + (sys.platform == 'darwin' and platform.machine() == 'x86_64') + or + USING_CLANG_CL + ): + pytest.xfail('Fails on macOS x86-64 and when using clang-cl ' + 'with Meson, see gh-23838') + self.check_einsum_sums('i1') + + def test_einsum_sums_uint8(self): + if ( + (sys.platform == 'darwin' and platform.machine() == 'x86_64') + or + USING_CLANG_CL + ): + pytest.xfail('Fails on macOS x86-64 and when using clang-cl ' + 'with Meson, see gh-23838') + self.check_einsum_sums('u1') + + def test_einsum_sums_int16(self): + self.check_einsum_sums('i2') + + def test_einsum_sums_uint16(self): + self.check_einsum_sums('u2') + + def test_einsum_sums_int32(self): + self.check_einsum_sums('i4') + self.check_einsum_sums('i4', True) + + def test_einsum_sums_uint32(self): + self.check_einsum_sums('u4') + self.check_einsum_sums('u4', True) + + def test_einsum_sums_int64(self): + self.check_einsum_sums('i8') + + def test_einsum_sums_uint64(self): + self.check_einsum_sums('u8') + + def test_einsum_sums_float16(self): + self.check_einsum_sums('f2') + + def test_einsum_sums_float32(self): + self.check_einsum_sums('f4') + + def test_einsum_sums_float64(self): + self.check_einsum_sums('f8') + self.check_einsum_sums('f8', True) + + def test_einsum_sums_longdouble(self): + self.check_einsum_sums(np.longdouble) + + def test_einsum_sums_cfloat64(self): + self.check_einsum_sums('c8') + self.check_einsum_sums('c8', True) + + def test_einsum_sums_cfloat128(self): + self.check_einsum_sums('c16') + + def test_einsum_sums_clongdouble(self): + self.check_einsum_sums(np.clongdouble) + + def test_einsum_sums_object(self): + self.check_einsum_sums('object') + self.check_einsum_sums('object', True) + + def test_einsum_misc(self): + # This call used to crash because of a bug in + # PyArray_AssignZero + a = np.ones((1, 2)) + b = np.ones((2, 2, 1)) + assert_equal(np.einsum('ij...,j...->i...', a, b), [[[2], [2]]]) + assert_equal(np.einsum('ij...,j...->i...', a, b, optimize=True), [[[2], [2]]]) + + # Regression test for issue #10369 (test unicode inputs with Python 2) + assert_equal(np.einsum('ij...,j...->i...', a, b), [[[2], [2]]]) + assert_equal(np.einsum('...i,...i', [1, 2, 3], [2, 3, 4]), 20) + assert_equal(np.einsum('...i,...i', [1, 2, 3], [2, 3, 4], + optimize='greedy'), 20) + + # The iterator had an issue with buffering this reduction + a = np.ones((5, 12, 4, 2, 3), np.int64) + b = np.ones((5, 12, 11), np.int64) + assert_equal(np.einsum('ijklm,ijn,ijn->', a, b, b), + np.einsum('ijklm,ijn->', a, b)) + assert_equal(np.einsum('ijklm,ijn,ijn->', a, b, b, optimize=True), + np.einsum('ijklm,ijn->', a, b, optimize=True)) + + # Issue #2027, was a problem in the contiguous 3-argument + # inner loop implementation + a = np.arange(1, 3) + b = np.arange(1, 5).reshape(2, 2) + c = np.arange(1, 9).reshape(4, 2) + assert_equal(np.einsum('x,yx,zx->xzy', a, b, c), + [[[1, 3], [3, 9], [5, 15], [7, 21]], + [[8, 16], [16, 32], [24, 48], [32, 64]]]) + assert_equal(np.einsum('x,yx,zx->xzy', a, b, c, optimize=True), + [[[1, 3], [3, 9], [5, 15], [7, 21]], + [[8, 16], [16, 32], [24, 48], [32, 64]]]) + + # Ensure explicitly setting out=None does not cause an error + # see issue gh-15776 and issue gh-15256 + assert_equal(np.einsum('i,j', [1], [2], out=None), [[2]]) + + def test_object_loop(self): + + class Mult: + def __mul__(self, other): + return 42 + + objMult = np.array([Mult()]) + objNULL = np.ndarray(buffer = b'\0' * np.intp(0).itemsize, shape=1, dtype=object) + + with pytest.raises(TypeError): + np.einsum("i,j", [1], objNULL) + with pytest.raises(TypeError): + np.einsum("i,j", objNULL, [1]) + assert np.einsum("i,j", objMult, objMult) == 42 + + def test_subscript_range(self): + # Issue #7741, make sure that all letters of Latin alphabet (both uppercase & lowercase) can be used + # when creating a subscript from arrays + a = np.ones((2, 3)) + b = np.ones((3, 4)) + np.einsum(a, [0, 20], b, [20, 2], [0, 2], optimize=False) + np.einsum(a, [0, 27], b, [27, 2], [0, 2], optimize=False) + np.einsum(a, [0, 51], b, [51, 2], [0, 2], optimize=False) + assert_raises(ValueError, lambda: np.einsum(a, [0, 52], b, [52, 2], [0, 2], optimize=False)) + assert_raises(ValueError, lambda: np.einsum(a, [-1, 5], b, [5, 2], [-1, 2], optimize=False)) + + def test_einsum_broadcast(self): + # Issue #2455 change in handling ellipsis + # remove the 'middle broadcast' error + # only use the 'RIGHT' iteration in prepare_op_axes + # adds auto broadcast on left where it belongs + # broadcast on right has to be explicit + # We need to test the optimized parsing as well + + A = np.arange(2 * 3 * 4).reshape(2, 3, 4) + B = np.arange(3) + ref = np.einsum('ijk,j->ijk', A, B, optimize=False) + for opt in [True, False]: + assert_equal(np.einsum('ij...,j...->ij...', A, B, optimize=opt), ref) + assert_equal(np.einsum('ij...,...j->ij...', A, B, optimize=opt), ref) + assert_equal(np.einsum('ij...,j->ij...', A, B, optimize=opt), ref) # used to raise error + + A = np.arange(12).reshape((4, 3)) + B = np.arange(6).reshape((3, 2)) + ref = np.einsum('ik,kj->ij', A, B, optimize=False) + for opt in [True, False]: + assert_equal(np.einsum('ik...,k...->i...', A, B, optimize=opt), ref) + assert_equal(np.einsum('ik...,...kj->i...j', A, B, optimize=opt), ref) + assert_equal(np.einsum('...k,kj', A, B, optimize=opt), ref) # used to raise error + assert_equal(np.einsum('ik,k...->i...', A, B, optimize=opt), ref) # used to raise error + + dims = [2, 3, 4, 5] + a = np.arange(np.prod(dims)).reshape(dims) + v = np.arange(dims[2]) + ref = np.einsum('ijkl,k->ijl', a, v, optimize=False) + for opt in [True, False]: + assert_equal(np.einsum('ijkl,k', a, v, optimize=opt), ref) + assert_equal(np.einsum('...kl,k', a, v, optimize=opt), ref) # used to raise error + assert_equal(np.einsum('...kl,k...', a, v, optimize=opt), ref) + + J, K, M = 160, 160, 120 + A = np.arange(J * K * M).reshape(1, 1, 1, J, K, M) + B = np.arange(J * K * M * 3).reshape(J, K, M, 3) + ref = np.einsum('...lmn,...lmno->...o', A, B, optimize=False) + for opt in [True, False]: + assert_equal(np.einsum('...lmn,lmno->...o', A, B, + optimize=opt), ref) # used to raise error + + def test_einsum_fixedstridebug(self): + # Issue #4485 obscure einsum bug + # This case revealed a bug in nditer where it reported a stride + # as 'fixed' (0) when it was in fact not fixed during processing + # (0 or 4). The reason for the bug was that the check for a fixed + # stride was using the information from the 2D inner loop reuse + # to restrict the iteration dimensions it had to validate to be + # the same, but that 2D inner loop reuse logic is only triggered + # during the buffer copying step, and hence it was invalid to + # rely on those values. The fix is to check all the dimensions + # of the stride in question, which in the test case reveals that + # the stride is not fixed. + # + # NOTE: This test is triggered by the fact that the default buffersize, + # used by einsum, is 8192, and 3*2731 = 8193, is larger than that + # and results in a mismatch between the buffering and the + # striding for operand A. + A = np.arange(2 * 3).reshape(2, 3).astype(np.float32) + B = np.arange(2 * 3 * 2731).reshape(2, 3, 2731).astype(np.int16) + es = np.einsum('cl, cpx->lpx', A, B) + tp = np.tensordot(A, B, axes=(0, 0)) + assert_equal(es, tp) + # The following is the original test case from the bug report, + # made repeatable by changing random arrays to aranges. + A = np.arange(3 * 3).reshape(3, 3).astype(np.float64) + B = np.arange(3 * 3 * 64 * 64).reshape(3, 3, 64, 64).astype(np.float32) + es = np.einsum('cl, cpxy->lpxy', A, B) + tp = np.tensordot(A, B, axes=(0, 0)) + assert_equal(es, tp) + + def test_einsum_fixed_collapsingbug(self): + # Issue #5147. + # The bug only occurred when output argument of einssum was used. + x = np.random.normal(0, 1, (5, 5, 5, 5)) + y1 = np.zeros((5, 5)) + np.einsum('aabb->ab', x, out=y1) + idx = np.arange(5) + y2 = x[idx[:, None], idx[:, None], idx, idx] + assert_equal(y1, y2) + + def test_einsum_failed_on_p9_and_s390x(self): + # Issues gh-14692 and gh-12689 + # Bug with signed vs unsigned char errored on power9 and s390x Linux + tensor = np.random.random_sample((10, 10, 10, 10)) + x = np.einsum('ijij->', tensor) + y = tensor.trace(axis1=0, axis2=2).trace() + assert_allclose(x, y) + + def test_einsum_all_contig_non_contig_output(self): + # Issue gh-5907, tests that the all contiguous special case + # actually checks the contiguity of the output + x = np.ones((5, 5)) + out = np.ones(10)[::2] + correct_base = np.ones(10) + correct_base[::2] = 5 + # Always worked (inner iteration is done with 0-stride): + np.einsum('mi,mi,mi->m', x, x, x, out=out) + assert_array_equal(out.base, correct_base) + # Example 1: + out = np.ones(10)[::2] + np.einsum('im,im,im->m', x, x, x, out=out) + assert_array_equal(out.base, correct_base) + # Example 2, buffering causes x to be contiguous but + # special cases do not catch the operation before: + out = np.ones((2, 2, 2))[..., 0] + correct_base = np.ones((2, 2, 2)) + correct_base[..., 0] = 2 + x = np.ones((2, 2), np.float32) + np.einsum('ij,jk->ik', x, x, out=out) + assert_array_equal(out.base, correct_base) + + @pytest.mark.parametrize("dtype", + np.typecodes["AllFloat"] + np.typecodes["AllInteger"]) + def test_different_paths(self, dtype): + # Test originally added to cover broken float16 path: gh-20305 + # Likely most are covered elsewhere, at least partially. + dtype = np.dtype(dtype) + # Simple test, designed to exercise most specialized code paths, + # note the +0.5 for floats. This makes sure we use a float value + # where the results must be exact. + arr = (np.arange(7) + 0.5).astype(dtype) + scalar = np.array(2, dtype=dtype) + + # contig -> scalar: + res = np.einsum('i->', arr) + assert res == arr.sum() + # contig, contig -> contig: + res = np.einsum('i,i->i', arr, arr) + assert_array_equal(res, arr * arr) + # noncontig, noncontig -> contig: + res = np.einsum('i,i->i', arr.repeat(2)[::2], arr.repeat(2)[::2]) + assert_array_equal(res, arr * arr) + # contig + contig -> scalar + assert np.einsum('i,i->', arr, arr) == (arr * arr).sum() + # contig + scalar -> contig (with out) + out = np.ones(7, dtype=dtype) + res = np.einsum('i,->i', arr, dtype.type(2), out=out) + assert_array_equal(res, arr * dtype.type(2)) + # scalar + contig -> contig (with out) + res = np.einsum(',i->i', scalar, arr) + assert_array_equal(res, arr * dtype.type(2)) + # scalar + contig -> scalar + res = np.einsum(',i->', scalar, arr) + # Use einsum to compare to not have difference due to sum round-offs: + assert res == np.einsum('i->', scalar * arr) + # contig + scalar -> scalar + res = np.einsum('i,->', arr, scalar) + # Use einsum to compare to not have difference due to sum round-offs: + assert res == np.einsum('i->', scalar * arr) + # contig + contig + contig -> scalar + arr = np.array([0.5, 0.5, 0.25, 4.5, 3.], dtype=dtype) + res = np.einsum('i,i,i->', arr, arr, arr) + assert_array_equal(res, (arr * arr * arr).sum()) + # four arrays: + res = np.einsum('i,i,i,i->', arr, arr, arr, arr) + assert_array_equal(res, (arr * arr * arr * arr).sum()) + + def test_small_boolean_arrays(self): + # See gh-5946. + # Use array of True embedded in False. + a = np.zeros((16, 1, 1), dtype=np.bool)[:2] + a[...] = True + out = np.zeros((16, 1, 1), dtype=np.bool)[:2] + tgt = np.ones((2, 1, 1), dtype=np.bool) + res = np.einsum('...ij,...jk->...ik', a, a, out=out) + assert_equal(res, tgt) + + def test_out_is_res(self): + a = np.arange(9).reshape(3, 3) + res = np.einsum('...ij,...jk->...ik', a, a, out=a) + assert res is a + + def optimize_compare(self, subscripts, operands=None): + # Tests all paths of the optimization function against + # conventional einsum + if operands is None: + args = [subscripts] + terms = subscripts.split('->')[0].split(',') + for term in terms: + dims = [global_size_dict[x] for x in term] + args.append(np.random.rand(*dims)) + else: + args = [subscripts] + operands + + noopt = np.einsum(*args, optimize=False) + opt = np.einsum(*args, optimize='greedy') + assert_almost_equal(opt, noopt) + opt = np.einsum(*args, optimize='optimal') + assert_almost_equal(opt, noopt) + + def test_hadamard_like_products(self): + # Hadamard outer products + self.optimize_compare('a,ab,abc->abc') + self.optimize_compare('a,b,ab->ab') + + def test_index_transformations(self): + # Simple index transformation cases + self.optimize_compare('ea,fb,gc,hd,abcd->efgh') + self.optimize_compare('ea,fb,abcd,gc,hd->efgh') + self.optimize_compare('abcd,ea,fb,gc,hd->efgh') + + def test_complex(self): + # Long test cases + self.optimize_compare('acdf,jbje,gihb,hfac,gfac,gifabc,hfac') + self.optimize_compare('acdf,jbje,gihb,hfac,gfac,gifabc,hfac') + self.optimize_compare('cd,bdhe,aidb,hgca,gc,hgibcd,hgac') + self.optimize_compare('abhe,hidj,jgba,hiab,gab') + self.optimize_compare('bde,cdh,agdb,hica,ibd,hgicd,hiac') + self.optimize_compare('chd,bde,agbc,hiad,hgc,hgi,hiad') + self.optimize_compare('chd,bde,agbc,hiad,bdi,cgh,agdb') + self.optimize_compare('bdhe,acad,hiab,agac,hibd') + + def test_collapse(self): + # Inner products + self.optimize_compare('ab,ab,c->') + self.optimize_compare('ab,ab,c->c') + self.optimize_compare('ab,ab,cd,cd->') + self.optimize_compare('ab,ab,cd,cd->ac') + self.optimize_compare('ab,ab,cd,cd->cd') + self.optimize_compare('ab,ab,cd,cd,ef,ef->') + + def test_expand(self): + # Outer products + self.optimize_compare('ab,cd,ef->abcdef') + self.optimize_compare('ab,cd,ef->acdf') + self.optimize_compare('ab,cd,de->abcde') + self.optimize_compare('ab,cd,de->be') + self.optimize_compare('ab,bcd,cd->abcd') + self.optimize_compare('ab,bcd,cd->abd') + + def test_edge_cases(self): + # Difficult edge cases for optimization + self.optimize_compare('eb,cb,fb->cef') + self.optimize_compare('dd,fb,be,cdb->cef') + self.optimize_compare('bca,cdb,dbf,afc->') + self.optimize_compare('dcc,fce,ea,dbf->ab') + self.optimize_compare('fdf,cdd,ccd,afe->ae') + self.optimize_compare('abcd,ad') + self.optimize_compare('ed,fcd,ff,bcf->be') + self.optimize_compare('baa,dcf,af,cde->be') + self.optimize_compare('bd,db,eac->ace') + self.optimize_compare('fff,fae,bef,def->abd') + self.optimize_compare('efc,dbc,acf,fd->abe') + self.optimize_compare('ba,ac,da->bcd') + + def test_inner_product(self): + # Inner products + self.optimize_compare('ab,ab') + self.optimize_compare('ab,ba') + self.optimize_compare('abc,abc') + self.optimize_compare('abc,bac') + self.optimize_compare('abc,cba') + + def test_random_cases(self): + # Randomly built test cases + self.optimize_compare('aab,fa,df,ecc->bde') + self.optimize_compare('ecb,fef,bad,ed->ac') + self.optimize_compare('bcf,bbb,fbf,fc->') + self.optimize_compare('bb,ff,be->e') + self.optimize_compare('bcb,bb,fc,fff->') + self.optimize_compare('fbb,dfd,fc,fc->') + self.optimize_compare('afd,ba,cc,dc->bf') + self.optimize_compare('adb,bc,fa,cfc->d') + self.optimize_compare('bbd,bda,fc,db->acf') + self.optimize_compare('dba,ead,cad->bce') + self.optimize_compare('aef,fbc,dca->bde') + + def test_combined_views_mapping(self): + # gh-10792 + a = np.arange(9).reshape(1, 1, 3, 1, 3) + b = np.einsum('bbcdc->d', a) + assert_equal(b, [12]) + + def test_broadcasting_dot_cases(self): + # Ensures broadcasting cases are not mistaken for GEMM + + a = np.random.rand(1, 5, 4) + b = np.random.rand(4, 6) + c = np.random.rand(5, 6) + d = np.random.rand(10) + + self.optimize_compare('ijk,kl,jl', operands=[a, b, c]) + self.optimize_compare('ijk,kl,jl,i->i', operands=[a, b, c, d]) + + e = np.random.rand(1, 1, 5, 4) + f = np.random.rand(7, 7) + self.optimize_compare('abjk,kl,jl', operands=[e, b, c]) + self.optimize_compare('abjk,kl,jl,ab->ab', operands=[e, b, c, f]) + + # Edge case found in gh-11308 + g = np.arange(64).reshape(2, 4, 8) + self.optimize_compare('obk,ijk->ioj', operands=[g, g]) + + def test_output_order(self): + # Ensure output order is respected for optimize cases, the below + # conraction should yield a reshaped tensor view + # gh-16415 + + a = np.ones((2, 3, 5), order='F') + b = np.ones((4, 3), order='F') + + for opt in [True, False]: + tmp = np.einsum('...ft,mf->...mt', a, b, order='a', optimize=opt) + assert_(tmp.flags.f_contiguous) + + tmp = np.einsum('...ft,mf->...mt', a, b, order='f', optimize=opt) + assert_(tmp.flags.f_contiguous) + + tmp = np.einsum('...ft,mf->...mt', a, b, order='c', optimize=opt) + assert_(tmp.flags.c_contiguous) + + tmp = np.einsum('...ft,mf->...mt', a, b, order='k', optimize=opt) + assert_(tmp.flags.c_contiguous is False) + assert_(tmp.flags.f_contiguous is False) + + tmp = np.einsum('...ft,mf->...mt', a, b, optimize=opt) + assert_(tmp.flags.c_contiguous is False) + assert_(tmp.flags.f_contiguous is False) + + c = np.ones((4, 3), order='C') + for opt in [True, False]: + tmp = np.einsum('...ft,mf->...mt', a, c, order='a', optimize=opt) + assert_(tmp.flags.c_contiguous) + + d = np.ones((2, 3, 5), order='C') + for opt in [True, False]: + tmp = np.einsum('...ft,mf->...mt', d, c, order='a', optimize=opt) + assert_(tmp.flags.c_contiguous) + +class TestEinsumPath: + def build_operands(self, string, size_dict=global_size_dict): + + # Builds views based off initial operands + operands = [string] + terms = string.split('->')[0].split(',') + for term in terms: + dims = [size_dict[x] for x in term] + operands.append(np.random.rand(*dims)) + + return operands + + def assert_path_equal(self, comp, benchmark): + # Checks if list of tuples are equivalent + ret = (len(comp) == len(benchmark)) + assert_(ret) + for pos in range(len(comp) - 1): + ret &= isinstance(comp[pos + 1], tuple) + ret &= (comp[pos + 1] == benchmark[pos + 1]) + assert_(ret) + + def test_memory_contraints(self): + # Ensure memory constraints are satisfied + + outer_test = self.build_operands('a,b,c->abc') + + path, path_str = np.einsum_path(*outer_test, optimize=('greedy', 0)) + self.assert_path_equal(path, ['einsum_path', (0, 1, 2)]) + + path, path_str = np.einsum_path(*outer_test, optimize=('optimal', 0)) + self.assert_path_equal(path, ['einsum_path', (0, 1, 2)]) + + long_test = self.build_operands('acdf,jbje,gihb,hfac') + path, path_str = np.einsum_path(*long_test, optimize=('greedy', 0)) + self.assert_path_equal(path, ['einsum_path', (0, 1, 2, 3)]) + + path, path_str = np.einsum_path(*long_test, optimize=('optimal', 0)) + self.assert_path_equal(path, ['einsum_path', (0, 1, 2, 3)]) + + def test_long_paths(self): + # Long complex cases + + # Long test 1 + long_test1 = self.build_operands('acdf,jbje,gihb,hfac,gfac,gifabc,hfac') + path, path_str = np.einsum_path(*long_test1, optimize='greedy') + self.assert_path_equal(path, ['einsum_path', + (3, 6), (3, 4), (2, 4), (2, 3), (0, 2), (0, 1)]) + + path, path_str = np.einsum_path(*long_test1, optimize='optimal') + self.assert_path_equal(path, ['einsum_path', + (3, 6), (3, 4), (2, 4), (2, 3), (0, 2), (0, 1)]) + + # Long test 2 + long_test2 = self.build_operands('chd,bde,agbc,hiad,bdi,cgh,agdb') + path, path_str = np.einsum_path(*long_test2, optimize='greedy') + self.assert_path_equal(path, ['einsum_path', + (3, 4), (0, 3), (3, 4), (1, 3), (1, 2), (0, 1)]) + + path, path_str = np.einsum_path(*long_test2, optimize='optimal') + self.assert_path_equal(path, ['einsum_path', + (0, 5), (1, 4), (3, 4), (1, 3), (1, 2), (0, 1)]) + + def test_edge_paths(self): + # Difficult edge cases + + # Edge test1 + edge_test1 = self.build_operands('eb,cb,fb->cef') + path, path_str = np.einsum_path(*edge_test1, optimize='greedy') + self.assert_path_equal(path, ['einsum_path', (0, 2), (0, 1)]) + + path, path_str = np.einsum_path(*edge_test1, optimize='optimal') + self.assert_path_equal(path, ['einsum_path', (0, 2), (0, 1)]) + + # Edge test2 + edge_test2 = self.build_operands('dd,fb,be,cdb->cef') + path, path_str = np.einsum_path(*edge_test2, optimize='greedy') + self.assert_path_equal(path, ['einsum_path', (0, 3), (0, 1), (0, 1)]) + + path, path_str = np.einsum_path(*edge_test2, optimize='optimal') + self.assert_path_equal(path, ['einsum_path', (0, 3), (0, 1), (0, 1)]) + + # Edge test3 + edge_test3 = self.build_operands('bca,cdb,dbf,afc->') + path, path_str = np.einsum_path(*edge_test3, optimize='greedy') + self.assert_path_equal(path, ['einsum_path', (1, 2), (0, 2), (0, 1)]) + + path, path_str = np.einsum_path(*edge_test3, optimize='optimal') + self.assert_path_equal(path, ['einsum_path', (1, 2), (0, 2), (0, 1)]) + + # Edge test4 + edge_test4 = self.build_operands('dcc,fce,ea,dbf->ab') + path, path_str = np.einsum_path(*edge_test4, optimize='greedy') + self.assert_path_equal(path, ['einsum_path', (1, 2), (0, 1), (0, 1)]) + + path, path_str = np.einsum_path(*edge_test4, optimize='optimal') + self.assert_path_equal(path, ['einsum_path', (1, 2), (0, 2), (0, 1)]) + + # Edge test5 + edge_test4 = self.build_operands('a,ac,ab,ad,cd,bd,bc->', + size_dict={"a": 20, "b": 20, "c": 20, "d": 20}) + path, path_str = np.einsum_path(*edge_test4, optimize='greedy') + self.assert_path_equal(path, ['einsum_path', (0, 1), (0, 1, 2, 3, 4, 5)]) + + path, path_str = np.einsum_path(*edge_test4, optimize='optimal') + self.assert_path_equal(path, ['einsum_path', (0, 1), (0, 1, 2, 3, 4, 5)]) + + def test_path_type_input(self): + # Test explicit path handling + path_test = self.build_operands('dcc,fce,ea,dbf->ab') + + path, path_str = np.einsum_path(*path_test, optimize=False) + self.assert_path_equal(path, ['einsum_path', (0, 1, 2, 3)]) + + path, path_str = np.einsum_path(*path_test, optimize=True) + self.assert_path_equal(path, ['einsum_path', (1, 2), (0, 1), (0, 1)]) + + exp_path = ['einsum_path', (0, 2), (0, 2), (0, 1)] + path, path_str = np.einsum_path(*path_test, optimize=exp_path) + self.assert_path_equal(path, exp_path) + + # Double check einsum works on the input path + noopt = np.einsum(*path_test, optimize=False) + opt = np.einsum(*path_test, optimize=exp_path) + assert_almost_equal(noopt, opt) + + def test_path_type_input_internal_trace(self): + #gh-20962 + path_test = self.build_operands('cab,cdd->ab') + exp_path = ['einsum_path', (1,), (0, 1)] + + path, path_str = np.einsum_path(*path_test, optimize=exp_path) + self.assert_path_equal(path, exp_path) + + # Double check einsum works on the input path + noopt = np.einsum(*path_test, optimize=False) + opt = np.einsum(*path_test, optimize=exp_path) + assert_almost_equal(noopt, opt) + + def test_path_type_input_invalid(self): + path_test = self.build_operands('ab,bc,cd,de->ae') + exp_path = ['einsum_path', (2, 3), (0, 1)] + assert_raises(RuntimeError, np.einsum, *path_test, optimize=exp_path) + assert_raises( + RuntimeError, np.einsum_path, *path_test, optimize=exp_path) + + path_test = self.build_operands('a,a,a->a') + exp_path = ['einsum_path', (1,), (0, 1)] + assert_raises(RuntimeError, np.einsum, *path_test, optimize=exp_path) + assert_raises( + RuntimeError, np.einsum_path, *path_test, optimize=exp_path) + + def test_spaces(self): + #gh-10794 + arr = np.array([[1]]) + for sp in itertools.product(['', ' '], repeat=4): + # no error for any spacing + np.einsum('{}...a{}->{}...a{}'.format(*sp), arr) + +def test_overlap(): + a = np.arange(9, dtype=int).reshape(3, 3) + b = np.arange(9, dtype=int).reshape(3, 3) + d = np.dot(a, b) + # sanity check + c = np.einsum('ij,jk->ik', a, b) + assert_equal(c, d) + #gh-10080, out overlaps one of the operands + c = np.einsum('ij,jk->ik', a, b, out=b) + assert_equal(c, d) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_errstate.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_errstate.py new file mode 100644 index 0000000000000000000000000000000000000000..bd6b8b8caec3bc004d7482a9cd63150709c048be --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_errstate.py @@ -0,0 +1,129 @@ +import pytest +import sysconfig + +import numpy as np +from numpy.testing import assert_, assert_raises, IS_WASM + +# The floating point emulation on ARM EABI systems lacking a hardware FPU is +# known to be buggy. This is an attempt to identify these hosts. It may not +# catch all possible cases, but it catches the known cases of gh-413 and +# gh-15562. +hosttype = sysconfig.get_config_var('HOST_GNU_TYPE') +arm_softfloat = False if hosttype is None else hosttype.endswith('gnueabi') + +class TestErrstate: + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.skipif(arm_softfloat, + reason='platform/cpu issue with FPU (gh-413,-15562)') + def test_invalid(self): + with np.errstate(all='raise', under='ignore'): + a = -np.arange(3) + # This should work + with np.errstate(invalid='ignore'): + np.sqrt(a) + # While this should fail! + with assert_raises(FloatingPointError): + np.sqrt(a) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.skipif(arm_softfloat, + reason='platform/cpu issue with FPU (gh-15562)') + def test_divide(self): + with np.errstate(all='raise', under='ignore'): + a = -np.arange(3) + # This should work + with np.errstate(divide='ignore'): + a // 0 + # While this should fail! + with assert_raises(FloatingPointError): + a // 0 + # As should this, see gh-15562 + with assert_raises(FloatingPointError): + a // a + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.skipif(arm_softfloat, + reason='platform/cpu issue with FPU (gh-15562)') + def test_errcall(self): + count = 0 + def foo(*args): + nonlocal count + count += 1 + + olderrcall = np.geterrcall() + with np.errstate(call=foo): + assert np.geterrcall() is foo + with np.errstate(call=None): + assert np.geterrcall() is None + assert np.geterrcall() is olderrcall + assert count == 0 + + with np.errstate(call=foo, invalid="call"): + np.array(np.inf) - np.array(np.inf) + + assert count == 1 + + def test_errstate_decorator(self): + @np.errstate(all='ignore') + def foo(): + a = -np.arange(3) + a // 0 + + foo() + + def test_errstate_enter_once(self): + errstate = np.errstate(invalid="warn") + with errstate: + pass + + # The errstate context cannot be entered twice as that would not be + # thread-safe + with pytest.raises(TypeError, + match="Cannot enter `np.errstate` twice"): + with errstate: + pass + + @pytest.mark.skipif(IS_WASM, reason="wasm doesn't support asyncio") + def test_asyncio_safe(self): + # asyncio may not always work, lets assume its fine if missing + # Pyodide/wasm doesn't support it. If this test makes problems, + # it should just be skipped liberally (or run differently). + asyncio = pytest.importorskip("asyncio") + + @np.errstate(invalid="ignore") + def decorated(): + # Decorated non-async function (it is not safe to decorate an + # async one) + assert np.geterr()["invalid"] == "ignore" + + async def func1(): + decorated() + await asyncio.sleep(0.1) + decorated() + + async def func2(): + with np.errstate(invalid="raise"): + assert np.geterr()["invalid"] == "raise" + await asyncio.sleep(0.125) + assert np.geterr()["invalid"] == "raise" + + # for good sport, a third one with yet another state: + async def func3(): + with np.errstate(invalid="print"): + assert np.geterr()["invalid"] == "print" + await asyncio.sleep(0.11) + assert np.geterr()["invalid"] == "print" + + async def main(): + # simply run all three function multiple times: + await asyncio.gather( + func1(), func2(), func3(), func1(), func2(), func3(), + func1(), func2(), func3(), func1(), func2(), func3()) + + loop = asyncio.new_event_loop() + with np.errstate(invalid="warn"): + asyncio.run(main()) + assert np.geterr()["invalid"] == "warn" + + assert np.geterr()["invalid"] == "warn" # the default + loop.close() diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_extint128.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_extint128.py new file mode 100644 index 0000000000000000000000000000000000000000..bd97cc20c016ff912a80f6b2f0f79037061d9dcb --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_extint128.py @@ -0,0 +1,219 @@ +import itertools +import contextlib +import operator +import pytest + +import numpy as np +import numpy._core._multiarray_tests as mt + +from numpy.testing import assert_raises, assert_equal + + +INT64_MAX = np.iinfo(np.int64).max +INT64_MIN = np.iinfo(np.int64).min +INT64_MID = 2**32 + +# int128 is not two's complement, the sign bit is separate +INT128_MAX = 2**128 - 1 +INT128_MIN = -INT128_MAX +INT128_MID = 2**64 + +INT64_VALUES = ( + [INT64_MIN + j for j in range(20)] + + [INT64_MAX - j for j in range(20)] + + [INT64_MID + j for j in range(-20, 20)] + + [2*INT64_MID + j for j in range(-20, 20)] + + [INT64_MID//2 + j for j in range(-20, 20)] + + list(range(-70, 70)) +) + +INT128_VALUES = ( + [INT128_MIN + j for j in range(20)] + + [INT128_MAX - j for j in range(20)] + + [INT128_MID + j for j in range(-20, 20)] + + [2*INT128_MID + j for j in range(-20, 20)] + + [INT128_MID//2 + j for j in range(-20, 20)] + + list(range(-70, 70)) + + [False] # negative zero +) + +INT64_POS_VALUES = [x for x in INT64_VALUES if x > 0] + + +@contextlib.contextmanager +def exc_iter(*args): + """ + Iterate over Cartesian product of *args, and if an exception is raised, + add information of the current iterate. + """ + + value = [None] + + def iterate(): + for v in itertools.product(*args): + value[0] = v + yield v + + try: + yield iterate() + except Exception: + import traceback + msg = "At: %r\n%s" % (repr(value[0]), + traceback.format_exc()) + raise AssertionError(msg) + + +def test_safe_binop(): + # Test checked arithmetic routines + + ops = [ + (operator.add, 1), + (operator.sub, 2), + (operator.mul, 3) + ] + + with exc_iter(ops, INT64_VALUES, INT64_VALUES) as it: + for xop, a, b in it: + pyop, op = xop + c = pyop(a, b) + + if not (INT64_MIN <= c <= INT64_MAX): + assert_raises(OverflowError, mt.extint_safe_binop, a, b, op) + else: + d = mt.extint_safe_binop(a, b, op) + if c != d: + # assert_equal is slow + assert_equal(d, c) + + +def test_to_128(): + with exc_iter(INT64_VALUES) as it: + for a, in it: + b = mt.extint_to_128(a) + if a != b: + assert_equal(b, a) + + +def test_to_64(): + with exc_iter(INT128_VALUES) as it: + for a, in it: + if not (INT64_MIN <= a <= INT64_MAX): + assert_raises(OverflowError, mt.extint_to_64, a) + else: + b = mt.extint_to_64(a) + if a != b: + assert_equal(b, a) + + +def test_mul_64_64(): + with exc_iter(INT64_VALUES, INT64_VALUES) as it: + for a, b in it: + c = a * b + d = mt.extint_mul_64_64(a, b) + if c != d: + assert_equal(d, c) + + +def test_add_128(): + with exc_iter(INT128_VALUES, INT128_VALUES) as it: + for a, b in it: + c = a + b + if not (INT128_MIN <= c <= INT128_MAX): + assert_raises(OverflowError, mt.extint_add_128, a, b) + else: + d = mt.extint_add_128(a, b) + if c != d: + assert_equal(d, c) + + +def test_sub_128(): + with exc_iter(INT128_VALUES, INT128_VALUES) as it: + for a, b in it: + c = a - b + if not (INT128_MIN <= c <= INT128_MAX): + assert_raises(OverflowError, mt.extint_sub_128, a, b) + else: + d = mt.extint_sub_128(a, b) + if c != d: + assert_equal(d, c) + + +def test_neg_128(): + with exc_iter(INT128_VALUES) as it: + for a, in it: + b = -a + c = mt.extint_neg_128(a) + if b != c: + assert_equal(c, b) + + +def test_shl_128(): + with exc_iter(INT128_VALUES) as it: + for a, in it: + if a < 0: + b = -(((-a) << 1) & (2**128-1)) + else: + b = (a << 1) & (2**128-1) + c = mt.extint_shl_128(a) + if b != c: + assert_equal(c, b) + + +def test_shr_128(): + with exc_iter(INT128_VALUES) as it: + for a, in it: + if a < 0: + b = -((-a) >> 1) + else: + b = a >> 1 + c = mt.extint_shr_128(a) + if b != c: + assert_equal(c, b) + + +def test_gt_128(): + with exc_iter(INT128_VALUES, INT128_VALUES) as it: + for a, b in it: + c = a > b + d = mt.extint_gt_128(a, b) + if c != d: + assert_equal(d, c) + + +@pytest.mark.slow +def test_divmod_128_64(): + with exc_iter(INT128_VALUES, INT64_POS_VALUES) as it: + for a, b in it: + if a >= 0: + c, cr = divmod(a, b) + else: + c, cr = divmod(-a, b) + c = -c + cr = -cr + + d, dr = mt.extint_divmod_128_64(a, b) + + if c != d or d != dr or b*d + dr != a: + assert_equal(d, c) + assert_equal(dr, cr) + assert_equal(b*d + dr, a) + + +def test_floordiv_128_64(): + with exc_iter(INT128_VALUES, INT64_POS_VALUES) as it: + for a, b in it: + c = a // b + d = mt.extint_floordiv_128_64(a, b) + + if c != d: + assert_equal(d, c) + + +def test_ceildiv_128_64(): + with exc_iter(INT128_VALUES, INT64_POS_VALUES) as it: + for a, b in it: + c = (a + b - 1) // b + d = mt.extint_ceildiv_128_64(a, b) + + if c != d: + assert_equal(d, c) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_function_base.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_function_base.py new file mode 100644 index 0000000000000000000000000000000000000000..bebc7c52e9dfae867aa02a99c99ac5722923e052 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_function_base.py @@ -0,0 +1,482 @@ +import sys + +import pytest + +import numpy as np +from numpy import ( + logspace, linspace, geomspace, dtype, array, arange, isnan, + ndarray, sqrt, nextafter, stack, errstate + ) +from numpy._core import sctypes +from numpy._core.function_base import add_newdoc +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_array_equal, assert_allclose, + IS_PYPY + ) + + +class PhysicalQuantity(float): + def __new__(cls, value): + return float.__new__(cls, value) + + def __add__(self, x): + assert_(isinstance(x, PhysicalQuantity)) + return PhysicalQuantity(float(x) + float(self)) + __radd__ = __add__ + + def __sub__(self, x): + assert_(isinstance(x, PhysicalQuantity)) + return PhysicalQuantity(float(self) - float(x)) + + def __rsub__(self, x): + assert_(isinstance(x, PhysicalQuantity)) + return PhysicalQuantity(float(x) - float(self)) + + def __mul__(self, x): + return PhysicalQuantity(float(x) * float(self)) + __rmul__ = __mul__ + + def __div__(self, x): + return PhysicalQuantity(float(self) / float(x)) + + def __rdiv__(self, x): + return PhysicalQuantity(float(x) / float(self)) + + +class PhysicalQuantity2(ndarray): + __array_priority__ = 10 + + +class TestLogspace: + + def test_basic(self): + y = logspace(0, 6) + assert_(len(y) == 50) + y = logspace(0, 6, num=100) + assert_(y[-1] == 10 ** 6) + y = logspace(0, 6, endpoint=False) + assert_(y[-1] < 10 ** 6) + y = logspace(0, 6, num=7) + assert_array_equal(y, [1, 10, 100, 1e3, 1e4, 1e5, 1e6]) + + def test_start_stop_array(self): + start = array([0., 1.]) + stop = array([6., 7.]) + t1 = logspace(start, stop, 6) + t2 = stack([logspace(_start, _stop, 6) + for _start, _stop in zip(start, stop)], axis=1) + assert_equal(t1, t2) + t3 = logspace(start, stop[0], 6) + t4 = stack([logspace(_start, stop[0], 6) + for _start in start], axis=1) + assert_equal(t3, t4) + t5 = logspace(start, stop, 6, axis=-1) + assert_equal(t5, t2.T) + + @pytest.mark.parametrize("axis", [0, 1, -1]) + def test_base_array(self, axis: int): + start = 1 + stop = 2 + num = 6 + base = array([1, 2]) + t1 = logspace(start, stop, num=num, base=base, axis=axis) + t2 = stack( + [logspace(start, stop, num=num, base=_base) for _base in base], + axis=(axis + 1) % t1.ndim, + ) + assert_equal(t1, t2) + + @pytest.mark.parametrize("axis", [0, 1, -1]) + def test_stop_base_array(self, axis: int): + start = 1 + stop = array([2, 3]) + num = 6 + base = array([1, 2]) + t1 = logspace(start, stop, num=num, base=base, axis=axis) + t2 = stack( + [logspace(start, _stop, num=num, base=_base) + for _stop, _base in zip(stop, base)], + axis=(axis + 1) % t1.ndim, + ) + assert_equal(t1, t2) + + def test_dtype(self): + y = logspace(0, 6, dtype='float32') + assert_equal(y.dtype, dtype('float32')) + y = logspace(0, 6, dtype='float64') + assert_equal(y.dtype, dtype('float64')) + y = logspace(0, 6, dtype='int32') + assert_equal(y.dtype, dtype('int32')) + + def test_physical_quantities(self): + a = PhysicalQuantity(1.0) + b = PhysicalQuantity(5.0) + assert_equal(logspace(a, b), logspace(1.0, 5.0)) + + def test_subclass(self): + a = array(1).view(PhysicalQuantity2) + b = array(7).view(PhysicalQuantity2) + ls = logspace(a, b) + assert type(ls) is PhysicalQuantity2 + assert_equal(ls, logspace(1.0, 7.0)) + ls = logspace(a, b, 1) + assert type(ls) is PhysicalQuantity2 + assert_equal(ls, logspace(1.0, 7.0, 1)) + + +class TestGeomspace: + + def test_basic(self): + y = geomspace(1, 1e6) + assert_(len(y) == 50) + y = geomspace(1, 1e6, num=100) + assert_(y[-1] == 10 ** 6) + y = geomspace(1, 1e6, endpoint=False) + assert_(y[-1] < 10 ** 6) + y = geomspace(1, 1e6, num=7) + assert_array_equal(y, [1, 10, 100, 1e3, 1e4, 1e5, 1e6]) + + y = geomspace(8, 2, num=3) + assert_allclose(y, [8, 4, 2]) + assert_array_equal(y.imag, 0) + + y = geomspace(-1, -100, num=3) + assert_array_equal(y, [-1, -10, -100]) + assert_array_equal(y.imag, 0) + + y = geomspace(-100, -1, num=3) + assert_array_equal(y, [-100, -10, -1]) + assert_array_equal(y.imag, 0) + + def test_boundaries_match_start_and_stop_exactly(self): + # make sure that the boundaries of the returned array exactly + # equal 'start' and 'stop' - this isn't obvious because + # np.exp(np.log(x)) isn't necessarily exactly equal to x + start = 0.3 + stop = 20.3 + + y = geomspace(start, stop, num=1) + assert_equal(y[0], start) + + y = geomspace(start, stop, num=1, endpoint=False) + assert_equal(y[0], start) + + y = geomspace(start, stop, num=3) + assert_equal(y[0], start) + assert_equal(y[-1], stop) + + y = geomspace(start, stop, num=3, endpoint=False) + assert_equal(y[0], start) + + def test_nan_interior(self): + with errstate(invalid='ignore'): + y = geomspace(-3, 3, num=4) + + assert_equal(y[0], -3.0) + assert_(isnan(y[1:-1]).all()) + assert_equal(y[3], 3.0) + + with errstate(invalid='ignore'): + y = geomspace(-3, 3, num=4, endpoint=False) + + assert_equal(y[0], -3.0) + assert_(isnan(y[1:]).all()) + + def test_complex(self): + # Purely imaginary + y = geomspace(1j, 16j, num=5) + assert_allclose(y, [1j, 2j, 4j, 8j, 16j]) + assert_array_equal(y.real, 0) + + y = geomspace(-4j, -324j, num=5) + assert_allclose(y, [-4j, -12j, -36j, -108j, -324j]) + assert_array_equal(y.real, 0) + + y = geomspace(1+1j, 1000+1000j, num=4) + assert_allclose(y, [1+1j, 10+10j, 100+100j, 1000+1000j]) + + y = geomspace(-1+1j, -1000+1000j, num=4) + assert_allclose(y, [-1+1j, -10+10j, -100+100j, -1000+1000j]) + + # Logarithmic spirals + y = geomspace(-1, 1, num=3, dtype=complex) + assert_allclose(y, [-1, 1j, +1]) + + y = geomspace(0+3j, -3+0j, 3) + assert_allclose(y, [0+3j, -3/sqrt(2)+3j/sqrt(2), -3+0j]) + y = geomspace(0+3j, 3+0j, 3) + assert_allclose(y, [0+3j, 3/sqrt(2)+3j/sqrt(2), 3+0j]) + y = geomspace(-3+0j, 0-3j, 3) + assert_allclose(y, [-3+0j, -3/sqrt(2)-3j/sqrt(2), 0-3j]) + y = geomspace(0+3j, -3+0j, 3) + assert_allclose(y, [0+3j, -3/sqrt(2)+3j/sqrt(2), -3+0j]) + y = geomspace(-2-3j, 5+7j, 7) + assert_allclose(y, [-2-3j, -0.29058977-4.15771027j, + 2.08885354-4.34146838j, 4.58345529-3.16355218j, + 6.41401745-0.55233457j, 6.75707386+3.11795092j, + 5+7j]) + + # Type promotion should prevent the -5 from becoming a NaN + y = geomspace(3j, -5, 2) + assert_allclose(y, [3j, -5]) + y = geomspace(-5, 3j, 2) + assert_allclose(y, [-5, 3j]) + + def test_complex_shortest_path(self): + # test the shortest logorithmic spiral is used, see gh-25644 + x = 1.2 + 3.4j + y = np.exp(1j*(np.pi-.1)) * x + z = np.geomspace(x, y, 5) + expected = np.array([1.2 + 3.4j, -1.47384 + 3.2905616j, + -3.33577588 + 1.36842949j, -3.36011056 - 1.30753855j, + -1.53343861 - 3.26321406j]) + np.testing.assert_array_almost_equal(z, expected) + + + def test_dtype(self): + y = geomspace(1, 1e6, dtype='float32') + assert_equal(y.dtype, dtype('float32')) + y = geomspace(1, 1e6, dtype='float64') + assert_equal(y.dtype, dtype('float64')) + y = geomspace(1, 1e6, dtype='int32') + assert_equal(y.dtype, dtype('int32')) + + # Native types + y = geomspace(1, 1e6, dtype=float) + assert_equal(y.dtype, dtype('float64')) + y = geomspace(1, 1e6, dtype=complex) + assert_equal(y.dtype, dtype('complex128')) + + def test_start_stop_array_scalar(self): + lim1 = array([120, 100], dtype="int8") + lim2 = array([-120, -100], dtype="int8") + lim3 = array([1200, 1000], dtype="uint16") + t1 = geomspace(lim1[0], lim1[1], 5) + t2 = geomspace(lim2[0], lim2[1], 5) + t3 = geomspace(lim3[0], lim3[1], 5) + t4 = geomspace(120.0, 100.0, 5) + t5 = geomspace(-120.0, -100.0, 5) + t6 = geomspace(1200.0, 1000.0, 5) + + # t3 uses float32, t6 uses float64 + assert_allclose(t1, t4, rtol=1e-2) + assert_allclose(t2, t5, rtol=1e-2) + assert_allclose(t3, t6, rtol=1e-5) + + def test_start_stop_array(self): + # Try to use all special cases. + start = array([1.e0, 32., 1j, -4j, 1+1j, -1]) + stop = array([1.e4, 2., 16j, -324j, 10000+10000j, 1]) + t1 = geomspace(start, stop, 5) + t2 = stack([geomspace(_start, _stop, 5) + for _start, _stop in zip(start, stop)], axis=1) + assert_equal(t1, t2) + t3 = geomspace(start, stop[0], 5) + t4 = stack([geomspace(_start, stop[0], 5) + for _start in start], axis=1) + assert_equal(t3, t4) + t5 = geomspace(start, stop, 5, axis=-1) + assert_equal(t5, t2.T) + + def test_physical_quantities(self): + a = PhysicalQuantity(1.0) + b = PhysicalQuantity(5.0) + assert_equal(geomspace(a, b), geomspace(1.0, 5.0)) + + def test_subclass(self): + a = array(1).view(PhysicalQuantity2) + b = array(7).view(PhysicalQuantity2) + gs = geomspace(a, b) + assert type(gs) is PhysicalQuantity2 + assert_equal(gs, geomspace(1.0, 7.0)) + gs = geomspace(a, b, 1) + assert type(gs) is PhysicalQuantity2 + assert_equal(gs, geomspace(1.0, 7.0, 1)) + + def test_bounds(self): + assert_raises(ValueError, geomspace, 0, 10) + assert_raises(ValueError, geomspace, 10, 0) + assert_raises(ValueError, geomspace, 0, 0) + + +class TestLinspace: + + def test_basic(self): + y = linspace(0, 10) + assert_(len(y) == 50) + y = linspace(2, 10, num=100) + assert_(y[-1] == 10) + y = linspace(2, 10, endpoint=False) + assert_(y[-1] < 10) + assert_raises(ValueError, linspace, 0, 10, num=-1) + + def test_corner(self): + y = list(linspace(0, 1, 1)) + assert_(y == [0.0], y) + assert_raises(TypeError, linspace, 0, 1, num=2.5) + + def test_type(self): + t1 = linspace(0, 1, 0).dtype + t2 = linspace(0, 1, 1).dtype + t3 = linspace(0, 1, 2).dtype + assert_equal(t1, t2) + assert_equal(t2, t3) + + def test_dtype(self): + y = linspace(0, 6, dtype='float32') + assert_equal(y.dtype, dtype('float32')) + y = linspace(0, 6, dtype='float64') + assert_equal(y.dtype, dtype('float64')) + y = linspace(0, 6, dtype='int32') + assert_equal(y.dtype, dtype('int32')) + + def test_start_stop_array_scalar(self): + lim1 = array([-120, 100], dtype="int8") + lim2 = array([120, -100], dtype="int8") + lim3 = array([1200, 1000], dtype="uint16") + t1 = linspace(lim1[0], lim1[1], 5) + t2 = linspace(lim2[0], lim2[1], 5) + t3 = linspace(lim3[0], lim3[1], 5) + t4 = linspace(-120.0, 100.0, 5) + t5 = linspace(120.0, -100.0, 5) + t6 = linspace(1200.0, 1000.0, 5) + assert_equal(t1, t4) + assert_equal(t2, t5) + assert_equal(t3, t6) + + def test_start_stop_array(self): + start = array([-120, 120], dtype="int8") + stop = array([100, -100], dtype="int8") + t1 = linspace(start, stop, 5) + t2 = stack([linspace(_start, _stop, 5) + for _start, _stop in zip(start, stop)], axis=1) + assert_equal(t1, t2) + t3 = linspace(start, stop[0], 5) + t4 = stack([linspace(_start, stop[0], 5) + for _start in start], axis=1) + assert_equal(t3, t4) + t5 = linspace(start, stop, 5, axis=-1) + assert_equal(t5, t2.T) + + def test_complex(self): + lim1 = linspace(1 + 2j, 3 + 4j, 5) + t1 = array([1.0+2.j, 1.5+2.5j, 2.0+3j, 2.5+3.5j, 3.0+4j]) + lim2 = linspace(1j, 10, 5) + t2 = array([0.0+1.j, 2.5+0.75j, 5.0+0.5j, 7.5+0.25j, 10.0+0j]) + assert_equal(lim1, t1) + assert_equal(lim2, t2) + + def test_physical_quantities(self): + a = PhysicalQuantity(0.0) + b = PhysicalQuantity(1.0) + assert_equal(linspace(a, b), linspace(0.0, 1.0)) + + def test_subclass(self): + a = array(0).view(PhysicalQuantity2) + b = array(1).view(PhysicalQuantity2) + ls = linspace(a, b) + assert type(ls) is PhysicalQuantity2 + assert_equal(ls, linspace(0.0, 1.0)) + ls = linspace(a, b, 1) + assert type(ls) is PhysicalQuantity2 + assert_equal(ls, linspace(0.0, 1.0, 1)) + + def test_array_interface(self): + # Regression test for https://github.com/numpy/numpy/pull/6659 + # Ensure that start/stop can be objects that implement + # __array_interface__ and are convertible to numeric scalars + + class Arrayish: + """ + A generic object that supports the __array_interface__ and hence + can in principle be converted to a numeric scalar, but is not + otherwise recognized as numeric, but also happens to support + multiplication by floats. + + Data should be an object that implements the buffer interface, + and contains at least 4 bytes. + """ + + def __init__(self, data): + self._data = data + + @property + def __array_interface__(self): + return {'shape': (), 'typestr': ' 300) + assert_(len(np.lib._index_tricks_impl.mgrid.__doc__) > 300) + + @pytest.mark.skipif(sys.flags.optimize == 2, reason="Python running -OO") + def test_errors_are_ignored(self): + prev_doc = np._core.flatiter.index.__doc__ + # nothing changed, but error ignored, this should probably + # give a warning (or even error) in the future. + add_newdoc("numpy._core", "flatiter", ("index", "bad docstring")) + assert prev_doc == np._core.flatiter.index.__doc__ diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_getlimits.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_getlimits.py new file mode 100644 index 0000000000000000000000000000000000000000..8378bad193915b6b85199a35844237545efa87bb --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_getlimits.py @@ -0,0 +1,194 @@ +""" Test functions for limits module. + +""" +import warnings +import numpy as np +import pytest +from numpy._core import finfo, iinfo +from numpy import half, single, double, longdouble +from numpy.testing import assert_equal, assert_, assert_raises +from numpy._core.getlimits import _discovered_machar, _float_ma + +################################################## + +class TestPythonFloat: + def test_singleton(self): + ftype = finfo(float) + ftype2 = finfo(float) + assert_equal(id(ftype), id(ftype2)) + +class TestHalf: + def test_singleton(self): + ftype = finfo(half) + ftype2 = finfo(half) + assert_equal(id(ftype), id(ftype2)) + +class TestSingle: + def test_singleton(self): + ftype = finfo(single) + ftype2 = finfo(single) + assert_equal(id(ftype), id(ftype2)) + +class TestDouble: + def test_singleton(self): + ftype = finfo(double) + ftype2 = finfo(double) + assert_equal(id(ftype), id(ftype2)) + +class TestLongdouble: + def test_singleton(self): + ftype = finfo(longdouble) + ftype2 = finfo(longdouble) + assert_equal(id(ftype), id(ftype2)) + +def assert_finfo_equal(f1, f2): + # assert two finfo instances have the same attributes + for attr in ('bits', 'eps', 'epsneg', 'iexp', 'machep', + 'max', 'maxexp', 'min', 'minexp', 'negep', 'nexp', + 'nmant', 'precision', 'resolution', 'tiny', + 'smallest_normal', 'smallest_subnormal'): + assert_equal(getattr(f1, attr), getattr(f2, attr), + f'finfo instances {f1} and {f2} differ on {attr}') + +def assert_iinfo_equal(i1, i2): + # assert two iinfo instances have the same attributes + for attr in ('bits', 'min', 'max'): + assert_equal(getattr(i1, attr), getattr(i2, attr), + f'iinfo instances {i1} and {i2} differ on {attr}') + +class TestFinfo: + def test_basic(self): + dts = list(zip(['f2', 'f4', 'f8', 'c8', 'c16'], + [np.float16, np.float32, np.float64, np.complex64, + np.complex128])) + for dt1, dt2 in dts: + assert_finfo_equal(finfo(dt1), finfo(dt2)) + + assert_raises(ValueError, finfo, 'i4') + + def test_regression_gh23108(self): + # np.float32(1.0) and np.float64(1.0) have the same hash and are + # equal under the == operator + f1 = np.finfo(np.float32(1.0)) + f2 = np.finfo(np.float64(1.0)) + assert f1 != f2 + + def test_regression_gh23867(self): + class NonHashableWithDtype: + __hash__ = None + dtype = np.dtype('float32') + + x = NonHashableWithDtype() + assert np.finfo(x) == np.finfo(x.dtype) + + +class TestIinfo: + def test_basic(self): + dts = list(zip(['i1', 'i2', 'i4', 'i8', + 'u1', 'u2', 'u4', 'u8'], + [np.int8, np.int16, np.int32, np.int64, + np.uint8, np.uint16, np.uint32, np.uint64])) + for dt1, dt2 in dts: + assert_iinfo_equal(iinfo(dt1), iinfo(dt2)) + + assert_raises(ValueError, iinfo, 'f4') + + def test_unsigned_max(self): + types = np._core.sctypes['uint'] + for T in types: + with np.errstate(over="ignore"): + max_calculated = T(0) - T(1) + assert_equal(iinfo(T).max, max_calculated) + +class TestRepr: + def test_iinfo_repr(self): + expected = "iinfo(min=-32768, max=32767, dtype=int16)" + assert_equal(repr(np.iinfo(np.int16)), expected) + + def test_finfo_repr(self): + expected = "finfo(resolution=1e-06, min=-3.4028235e+38," + \ + " max=3.4028235e+38, dtype=float32)" + assert_equal(repr(np.finfo(np.float32)), expected) + + +def test_instances(): + # Test the finfo and iinfo results on numeric instances agree with + # the results on the corresponding types + + for c in [int, np.int16, np.int32, np.int64]: + class_iinfo = iinfo(c) + instance_iinfo = iinfo(c(12)) + + assert_iinfo_equal(class_iinfo, instance_iinfo) + + for c in [float, np.float16, np.float32, np.float64]: + class_finfo = finfo(c) + instance_finfo = finfo(c(1.2)) + assert_finfo_equal(class_finfo, instance_finfo) + + with pytest.raises(ValueError): + iinfo(10.) + + with pytest.raises(ValueError): + iinfo('hi') + + with pytest.raises(ValueError): + finfo(np.int64(1)) + + +def assert_ma_equal(discovered, ma_like): + # Check MachAr-like objects same as calculated MachAr instances + for key, value in discovered.__dict__.items(): + assert_equal(value, getattr(ma_like, key)) + if hasattr(value, 'shape'): + assert_equal(value.shape, getattr(ma_like, key).shape) + assert_equal(value.dtype, getattr(ma_like, key).dtype) + + +def test_known_types(): + # Test we are correctly compiling parameters for known types + for ftype, ma_like in ((np.float16, _float_ma[16]), + (np.float32, _float_ma[32]), + (np.float64, _float_ma[64])): + assert_ma_equal(_discovered_machar(ftype), ma_like) + # Suppress warning for broken discovery of double double on PPC + with np.errstate(all='ignore'): + ld_ma = _discovered_machar(np.longdouble) + bytes = np.dtype(np.longdouble).itemsize + if (ld_ma.it, ld_ma.maxexp) == (63, 16384) and bytes in (12, 16): + # 80-bit extended precision + assert_ma_equal(ld_ma, _float_ma[80]) + elif (ld_ma.it, ld_ma.maxexp) == (112, 16384) and bytes == 16: + # IEE 754 128-bit + assert_ma_equal(ld_ma, _float_ma[128]) + + +def test_subnormal_warning(): + """Test that the subnormal is zero warning is not being raised.""" + with np.errstate(all='ignore'): + ld_ma = _discovered_machar(np.longdouble) + bytes = np.dtype(np.longdouble).itemsize + with warnings.catch_warnings(record=True) as w: + warnings.simplefilter('always') + if (ld_ma.it, ld_ma.maxexp) == (63, 16384) and bytes in (12, 16): + # 80-bit extended precision + ld_ma.smallest_subnormal + assert len(w) == 0 + elif (ld_ma.it, ld_ma.maxexp) == (112, 16384) and bytes == 16: + # IEE 754 128-bit + ld_ma.smallest_subnormal + assert len(w) == 0 + else: + # Double double + ld_ma.smallest_subnormal + # This test may fail on some platforms + assert len(w) == 0 + + +def test_plausible_finfo(): + # Assert that finfo returns reasonable results for all types + for ftype in np._core.sctypes['float'] + np._core.sctypes['complex']: + info = np.finfo(ftype) + assert_(info.nmant > 1) + assert_(info.minexp < -1) + assert_(info.maxexp > 1) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_half.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_half.py new file mode 100644 index 0000000000000000000000000000000000000000..fbc1bf6a0a6dd0c82b8c62968407e9c959a582f8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_half.py @@ -0,0 +1,572 @@ +import platform +import pytest + +import numpy as np +from numpy import uint16, float16, float32, float64 +from numpy.testing import assert_, assert_equal, _OLD_PROMOTION, IS_WASM + + +def assert_raises_fpe(strmatch, callable, *args, **kwargs): + try: + callable(*args, **kwargs) + except FloatingPointError as exc: + assert_(str(exc).find(strmatch) >= 0, + "Did not raise floating point %s error" % strmatch) + else: + assert_(False, + "Did not raise floating point %s error" % strmatch) + +class TestHalf: + def setup_method(self): + # An array of all possible float16 values + self.all_f16 = np.arange(0x10000, dtype=uint16) + self.all_f16.dtype = float16 + + # NaN value can cause an invalid FP exception if HW is been used + with np.errstate(invalid='ignore'): + self.all_f32 = np.array(self.all_f16, dtype=float32) + self.all_f64 = np.array(self.all_f16, dtype=float64) + + # An array of all non-NaN float16 values, in sorted order + self.nonan_f16 = np.concatenate( + (np.arange(0xfc00, 0x7fff, -1, dtype=uint16), + np.arange(0x0000, 0x7c01, 1, dtype=uint16))) + self.nonan_f16.dtype = float16 + self.nonan_f32 = np.array(self.nonan_f16, dtype=float32) + self.nonan_f64 = np.array(self.nonan_f16, dtype=float64) + + # An array of all finite float16 values, in sorted order + self.finite_f16 = self.nonan_f16[1:-1] + self.finite_f32 = self.nonan_f32[1:-1] + self.finite_f64 = self.nonan_f64[1:-1] + + def test_half_conversions(self): + """Checks that all 16-bit values survive conversion + to/from 32-bit and 64-bit float""" + # Because the underlying routines preserve the NaN bits, every + # value is preserved when converting to/from other floats. + + # Convert from float32 back to float16 + with np.errstate(invalid='ignore'): + b = np.array(self.all_f32, dtype=float16) + # avoid testing NaNs due to differ bits wither Q/SNaNs + b_nn = b == b + assert_equal(self.all_f16[b_nn].view(dtype=uint16), + b[b_nn].view(dtype=uint16)) + + # Convert from float64 back to float16 + with np.errstate(invalid='ignore'): + b = np.array(self.all_f64, dtype=float16) + b_nn = b == b + assert_equal(self.all_f16[b_nn].view(dtype=uint16), + b[b_nn].view(dtype=uint16)) + + # Convert float16 to longdouble and back + # This doesn't necessarily preserve the extra NaN bits, + # so exclude NaNs. + a_ld = np.array(self.nonan_f16, dtype=np.longdouble) + b = np.array(a_ld, dtype=float16) + assert_equal(self.nonan_f16.view(dtype=uint16), + b.view(dtype=uint16)) + + # Check the range for which all integers can be represented + i_int = np.arange(-2048, 2049) + i_f16 = np.array(i_int, dtype=float16) + j = np.array(i_f16, dtype=int) + assert_equal(i_int, j) + + @pytest.mark.parametrize("string_dt", ["S", "U"]) + def test_half_conversion_to_string(self, string_dt): + # Currently uses S/U32 (which is sufficient for float32) + expected_dt = np.dtype(f"{string_dt}32") + assert np.promote_types(np.float16, string_dt) == expected_dt + assert np.promote_types(string_dt, np.float16) == expected_dt + + arr = np.ones(3, dtype=np.float16).astype(string_dt) + assert arr.dtype == expected_dt + + @pytest.mark.parametrize("string_dt", ["S", "U"]) + def test_half_conversion_from_string(self, string_dt): + string = np.array("3.1416", dtype=string_dt) + assert string.astype(np.float16) == np.array(3.1416, dtype=np.float16) + + @pytest.mark.parametrize("offset", [None, "up", "down"]) + @pytest.mark.parametrize("shift", [None, "up", "down"]) + @pytest.mark.parametrize("float_t", [np.float32, np.float64]) + @np._no_nep50_warning() + def test_half_conversion_rounding(self, float_t, shift, offset): + # Assumes that round to even is used during casting. + max_pattern = np.float16(np.finfo(np.float16).max).view(np.uint16) + + # Test all (positive) finite numbers, denormals are most interesting + # however: + f16s_patterns = np.arange(0, max_pattern+1, dtype=np.uint16) + f16s_float = f16s_patterns.view(np.float16).astype(float_t) + + # Shift the values by half a bit up or a down (or do not shift), + if shift == "up": + f16s_float = 0.5 * (f16s_float[:-1] + f16s_float[1:])[1:] + elif shift == "down": + f16s_float = 0.5 * (f16s_float[:-1] + f16s_float[1:])[:-1] + else: + f16s_float = f16s_float[1:-1] + + # Increase the float by a minimal value: + if offset == "up": + f16s_float = np.nextafter(f16s_float, float_t(np.inf)) + elif offset == "down": + f16s_float = np.nextafter(f16s_float, float_t(-np.inf)) + + # Convert back to float16 and its bit pattern: + res_patterns = f16s_float.astype(np.float16).view(np.uint16) + + # The above calculations tries the original values, or the exact + # mid points between the float16 values. It then further offsets them + # by as little as possible. If no offset occurs, "round to even" + # logic will be necessary, an arbitrarily small offset should cause + # normal up/down rounding always. + + # Calculate the expected pattern: + cmp_patterns = f16s_patterns[1:-1].copy() + + if shift == "down" and offset != "up": + shift_pattern = -1 + elif shift == "up" and offset != "down": + shift_pattern = 1 + else: + # There cannot be a shift, either shift is None, so all rounding + # will go back to original, or shift is reduced by offset too much. + shift_pattern = 0 + + # If rounding occurs, is it normal rounding or round to even? + if offset is None: + # Round to even occurs, modify only non-even, cast to allow + (-1) + cmp_patterns[0::2].view(np.int16)[...] += shift_pattern + else: + cmp_patterns.view(np.int16)[...] += shift_pattern + + assert_equal(res_patterns, cmp_patterns) + + @pytest.mark.parametrize(["float_t", "uint_t", "bits"], + [(np.float32, np.uint32, 23), + (np.float64, np.uint64, 52)]) + def test_half_conversion_denormal_round_even(self, float_t, uint_t, bits): + # Test specifically that all bits are considered when deciding + # whether round to even should occur (i.e. no bits are lost at the + # end. Compare also gh-12721. The most bits can get lost for the + # smallest denormal: + smallest_value = np.uint16(1).view(np.float16).astype(float_t) + assert smallest_value == 2**-24 + + # Will be rounded to zero based on round to even rule: + rounded_to_zero = smallest_value / float_t(2) + assert rounded_to_zero.astype(np.float16) == 0 + + # The significand will be all 0 for the float_t, test that we do not + # lose the lower ones of these: + for i in range(bits): + # slightly increasing the value should make it round up: + larger_pattern = rounded_to_zero.view(uint_t) | uint_t(1 << i) + larger_value = larger_pattern.view(float_t) + assert larger_value.astype(np.float16) == smallest_value + + def test_nans_infs(self): + with np.errstate(all='ignore'): + # Check some of the ufuncs + assert_equal(np.isnan(self.all_f16), np.isnan(self.all_f32)) + assert_equal(np.isinf(self.all_f16), np.isinf(self.all_f32)) + assert_equal(np.isfinite(self.all_f16), np.isfinite(self.all_f32)) + assert_equal(np.signbit(self.all_f16), np.signbit(self.all_f32)) + assert_equal(np.spacing(float16(65504)), np.inf) + + # Check comparisons of all values with NaN + nan = float16(np.nan) + + assert_(not (self.all_f16 == nan).any()) + assert_(not (nan == self.all_f16).any()) + + assert_((self.all_f16 != nan).all()) + assert_((nan != self.all_f16).all()) + + assert_(not (self.all_f16 < nan).any()) + assert_(not (nan < self.all_f16).any()) + + assert_(not (self.all_f16 <= nan).any()) + assert_(not (nan <= self.all_f16).any()) + + assert_(not (self.all_f16 > nan).any()) + assert_(not (nan > self.all_f16).any()) + + assert_(not (self.all_f16 >= nan).any()) + assert_(not (nan >= self.all_f16).any()) + + def test_half_values(self): + """Confirms a small number of known half values""" + a = np.array([1.0, -1.0, + 2.0, -2.0, + 0.0999755859375, 0.333251953125, # 1/10, 1/3 + 65504, -65504, # Maximum magnitude + 2.0**(-14), -2.0**(-14), # Minimum normal + 2.0**(-24), -2.0**(-24), # Minimum subnormal + 0, -1/1e1000, # Signed zeros + np.inf, -np.inf]) + b = np.array([0x3c00, 0xbc00, + 0x4000, 0xc000, + 0x2e66, 0x3555, + 0x7bff, 0xfbff, + 0x0400, 0x8400, + 0x0001, 0x8001, + 0x0000, 0x8000, + 0x7c00, 0xfc00], dtype=uint16) + b.dtype = float16 + assert_equal(a, b) + + def test_half_rounding(self): + """Checks that rounding when converting to half is correct""" + a = np.array([2.0**-25 + 2.0**-35, # Rounds to minimum subnormal + 2.0**-25, # Underflows to zero (nearest even mode) + 2.0**-26, # Underflows to zero + 1.0+2.0**-11 + 2.0**-16, # rounds to 1.0+2**(-10) + 1.0+2.0**-11, # rounds to 1.0 (nearest even mode) + 1.0+2.0**-12, # rounds to 1.0 + 65519, # rounds to 65504 + 65520], # rounds to inf + dtype=float64) + rounded = [2.0**-24, + 0.0, + 0.0, + 1.0+2.0**(-10), + 1.0, + 1.0, + 65504, + np.inf] + + # Check float64->float16 rounding + with np.errstate(over="ignore"): + b = np.array(a, dtype=float16) + assert_equal(b, rounded) + + # Check float32->float16 rounding + a = np.array(a, dtype=float32) + with np.errstate(over="ignore"): + b = np.array(a, dtype=float16) + assert_equal(b, rounded) + + def test_half_correctness(self): + """Take every finite float16, and check the casting functions with + a manual conversion.""" + + # Create an array of all finite float16s + a_bits = self.finite_f16.view(dtype=uint16) + + # Convert to 64-bit float manually + a_sgn = (-1.0)**((a_bits & 0x8000) >> 15) + a_exp = np.array((a_bits & 0x7c00) >> 10, dtype=np.int32) - 15 + a_man = (a_bits & 0x03ff) * 2.0**(-10) + # Implicit bit of normalized floats + a_man[a_exp != -15] += 1 + # Denormalized exponent is -14 + a_exp[a_exp == -15] = -14 + + a_manual = a_sgn * a_man * 2.0**a_exp + + a32_fail = np.nonzero(self.finite_f32 != a_manual)[0] + if len(a32_fail) != 0: + bad_index = a32_fail[0] + assert_equal(self.finite_f32, a_manual, + "First non-equal is half value 0x%x -> %g != %g" % + (a_bits[bad_index], + self.finite_f32[bad_index], + a_manual[bad_index])) + + a64_fail = np.nonzero(self.finite_f64 != a_manual)[0] + if len(a64_fail) != 0: + bad_index = a64_fail[0] + assert_equal(self.finite_f64, a_manual, + "First non-equal is half value 0x%x -> %g != %g" % + (a_bits[bad_index], + self.finite_f64[bad_index], + a_manual[bad_index])) + + def test_half_ordering(self): + """Make sure comparisons are working right""" + + # All non-NaN float16 values in reverse order + a = self.nonan_f16[::-1].copy() + + # 32-bit float copy + b = np.array(a, dtype=float32) + + # Should sort the same + a.sort() + b.sort() + assert_equal(a, b) + + # Comparisons should work + assert_((a[:-1] <= a[1:]).all()) + assert_(not (a[:-1] > a[1:]).any()) + assert_((a[1:] >= a[:-1]).all()) + assert_(not (a[1:] < a[:-1]).any()) + # All != except for +/-0 + assert_equal(np.nonzero(a[:-1] < a[1:])[0].size, a.size-2) + assert_equal(np.nonzero(a[1:] > a[:-1])[0].size, a.size-2) + + def test_half_funcs(self): + """Test the various ArrFuncs""" + + # fill + assert_equal(np.arange(10, dtype=float16), + np.arange(10, dtype=float32)) + + # fillwithscalar + a = np.zeros((5,), dtype=float16) + a.fill(1) + assert_equal(a, np.ones((5,), dtype=float16)) + + # nonzero and copyswap + a = np.array([0, 0, -1, -1/1e20, 0, 2.0**-24, 7.629e-6], dtype=float16) + assert_equal(a.nonzero()[0], + [2, 5, 6]) + a = a.byteswap() + a = a.view(a.dtype.newbyteorder()) + assert_equal(a.nonzero()[0], + [2, 5, 6]) + + # dot + a = np.arange(0, 10, 0.5, dtype=float16) + b = np.ones((20,), dtype=float16) + assert_equal(np.dot(a, b), + 95) + + # argmax + a = np.array([0, -np.inf, -2, 0.5, 12.55, 7.3, 2.1, 12.4], dtype=float16) + assert_equal(a.argmax(), + 4) + a = np.array([0, -np.inf, -2, np.inf, 12.55, np.nan, 2.1, 12.4], dtype=float16) + assert_equal(a.argmax(), + 5) + + # getitem + a = np.arange(10, dtype=float16) + for i in range(10): + assert_equal(a.item(i), i) + + def test_spacing_nextafter(self): + """Test np.spacing and np.nextafter""" + # All non-negative finite #'s + a = np.arange(0x7c00, dtype=uint16) + hinf = np.array((np.inf,), dtype=float16) + hnan = np.array((np.nan,), dtype=float16) + a_f16 = a.view(dtype=float16) + + assert_equal(np.spacing(a_f16[:-1]), a_f16[1:]-a_f16[:-1]) + + assert_equal(np.nextafter(a_f16[:-1], hinf), a_f16[1:]) + assert_equal(np.nextafter(a_f16[0], -hinf), -a_f16[1]) + assert_equal(np.nextafter(a_f16[1:], -hinf), a_f16[:-1]) + + assert_equal(np.nextafter(hinf, a_f16), a_f16[-1]) + assert_equal(np.nextafter(-hinf, a_f16), -a_f16[-1]) + + assert_equal(np.nextafter(hinf, hinf), hinf) + assert_equal(np.nextafter(hinf, -hinf), a_f16[-1]) + assert_equal(np.nextafter(-hinf, hinf), -a_f16[-1]) + assert_equal(np.nextafter(-hinf, -hinf), -hinf) + + assert_equal(np.nextafter(a_f16, hnan), hnan[0]) + assert_equal(np.nextafter(hnan, a_f16), hnan[0]) + + assert_equal(np.nextafter(hnan, hnan), hnan) + assert_equal(np.nextafter(hinf, hnan), hnan) + assert_equal(np.nextafter(hnan, hinf), hnan) + + # switch to negatives + a |= 0x8000 + + assert_equal(np.spacing(a_f16[0]), np.spacing(a_f16[1])) + assert_equal(np.spacing(a_f16[1:]), a_f16[:-1]-a_f16[1:]) + + assert_equal(np.nextafter(a_f16[0], hinf), -a_f16[1]) + assert_equal(np.nextafter(a_f16[1:], hinf), a_f16[:-1]) + assert_equal(np.nextafter(a_f16[:-1], -hinf), a_f16[1:]) + + assert_equal(np.nextafter(hinf, a_f16), -a_f16[-1]) + assert_equal(np.nextafter(-hinf, a_f16), a_f16[-1]) + + assert_equal(np.nextafter(a_f16, hnan), hnan[0]) + assert_equal(np.nextafter(hnan, a_f16), hnan[0]) + + def test_half_ufuncs(self): + """Test the various ufuncs""" + + a = np.array([0, 1, 2, 4, 2], dtype=float16) + b = np.array([-2, 5, 1, 4, 3], dtype=float16) + c = np.array([0, -1, -np.inf, np.nan, 6], dtype=float16) + + assert_equal(np.add(a, b), [-2, 6, 3, 8, 5]) + assert_equal(np.subtract(a, b), [2, -4, 1, 0, -1]) + assert_equal(np.multiply(a, b), [0, 5, 2, 16, 6]) + assert_equal(np.divide(a, b), [0, 0.199951171875, 2, 1, 0.66650390625]) + + assert_equal(np.equal(a, b), [False, False, False, True, False]) + assert_equal(np.not_equal(a, b), [True, True, True, False, True]) + assert_equal(np.less(a, b), [False, True, False, False, True]) + assert_equal(np.less_equal(a, b), [False, True, False, True, True]) + assert_equal(np.greater(a, b), [True, False, True, False, False]) + assert_equal(np.greater_equal(a, b), [True, False, True, True, False]) + assert_equal(np.logical_and(a, b), [False, True, True, True, True]) + assert_equal(np.logical_or(a, b), [True, True, True, True, True]) + assert_equal(np.logical_xor(a, b), [True, False, False, False, False]) + assert_equal(np.logical_not(a), [True, False, False, False, False]) + + assert_equal(np.isnan(c), [False, False, False, True, False]) + assert_equal(np.isinf(c), [False, False, True, False, False]) + assert_equal(np.isfinite(c), [True, True, False, False, True]) + assert_equal(np.signbit(b), [True, False, False, False, False]) + + assert_equal(np.copysign(b, a), [2, 5, 1, 4, 3]) + + assert_equal(np.maximum(a, b), [0, 5, 2, 4, 3]) + + x = np.maximum(b, c) + assert_(np.isnan(x[3])) + x[3] = 0 + assert_equal(x, [0, 5, 1, 0, 6]) + + assert_equal(np.minimum(a, b), [-2, 1, 1, 4, 2]) + + x = np.minimum(b, c) + assert_(np.isnan(x[3])) + x[3] = 0 + assert_equal(x, [-2, -1, -np.inf, 0, 3]) + + assert_equal(np.fmax(a, b), [0, 5, 2, 4, 3]) + assert_equal(np.fmax(b, c), [0, 5, 1, 4, 6]) + assert_equal(np.fmin(a, b), [-2, 1, 1, 4, 2]) + assert_equal(np.fmin(b, c), [-2, -1, -np.inf, 4, 3]) + + assert_equal(np.floor_divide(a, b), [0, 0, 2, 1, 0]) + assert_equal(np.remainder(a, b), [0, 1, 0, 0, 2]) + assert_equal(np.divmod(a, b), ([0, 0, 2, 1, 0], [0, 1, 0, 0, 2])) + assert_equal(np.square(b), [4, 25, 1, 16, 9]) + assert_equal(np.reciprocal(b), [-0.5, 0.199951171875, 1, 0.25, 0.333251953125]) + assert_equal(np.ones_like(b), [1, 1, 1, 1, 1]) + assert_equal(np.conjugate(b), b) + assert_equal(np.absolute(b), [2, 5, 1, 4, 3]) + assert_equal(np.negative(b), [2, -5, -1, -4, -3]) + assert_equal(np.positive(b), b) + assert_equal(np.sign(b), [-1, 1, 1, 1, 1]) + assert_equal(np.modf(b), ([0, 0, 0, 0, 0], b)) + assert_equal(np.frexp(b), ([-0.5, 0.625, 0.5, 0.5, 0.75], [2, 3, 1, 3, 2])) + assert_equal(np.ldexp(b, [0, 1, 2, 4, 2]), [-2, 10, 4, 64, 12]) + + @np._no_nep50_warning() + def test_half_coercion(self, weak_promotion): + """Test that half gets coerced properly with the other types""" + a16 = np.array((1,), dtype=float16) + a32 = np.array((1,), dtype=float32) + b16 = float16(1) + b32 = float32(1) + + assert np.power(a16, 2).dtype == float16 + assert np.power(a16, 2.0).dtype == float16 + assert np.power(a16, b16).dtype == float16 + expected_dt = float32 if weak_promotion else float16 + assert np.power(a16, b32).dtype == expected_dt + assert np.power(a16, a16).dtype == float16 + assert np.power(a16, a32).dtype == float32 + + expected_dt = float16 if weak_promotion else float64 + assert np.power(b16, 2).dtype == expected_dt + assert np.power(b16, 2.0).dtype == expected_dt + assert np.power(b16, b16).dtype, float16 + assert np.power(b16, b32).dtype, float32 + assert np.power(b16, a16).dtype, float16 + assert np.power(b16, a32).dtype, float32 + + assert np.power(a32, a16).dtype == float32 + assert np.power(a32, b16).dtype == float32 + expected_dt = float32 if weak_promotion else float16 + assert np.power(b32, a16).dtype == expected_dt + assert np.power(b32, b16).dtype == float32 + + @pytest.mark.skipif(platform.machine() == "armv5tel", + reason="See gh-413.") + @pytest.mark.skipif(IS_WASM, + reason="fp exceptions don't work in wasm.") + def test_half_fpe(self): + with np.errstate(all='raise'): + sx16 = np.array((1e-4,), dtype=float16) + bx16 = np.array((1e4,), dtype=float16) + sy16 = float16(1e-4) + by16 = float16(1e4) + + # Underflow errors + assert_raises_fpe('underflow', lambda a, b:a*b, sx16, sx16) + assert_raises_fpe('underflow', lambda a, b:a*b, sx16, sy16) + assert_raises_fpe('underflow', lambda a, b:a*b, sy16, sx16) + assert_raises_fpe('underflow', lambda a, b:a*b, sy16, sy16) + assert_raises_fpe('underflow', lambda a, b:a/b, sx16, bx16) + assert_raises_fpe('underflow', lambda a, b:a/b, sx16, by16) + assert_raises_fpe('underflow', lambda a, b:a/b, sy16, bx16) + assert_raises_fpe('underflow', lambda a, b:a/b, sy16, by16) + assert_raises_fpe('underflow', lambda a, b:a/b, + float16(2.**-14), float16(2**11)) + assert_raises_fpe('underflow', lambda a, b:a/b, + float16(-2.**-14), float16(2**11)) + assert_raises_fpe('underflow', lambda a, b:a/b, + float16(2.**-14+2**-24), float16(2)) + assert_raises_fpe('underflow', lambda a, b:a/b, + float16(-2.**-14-2**-24), float16(2)) + assert_raises_fpe('underflow', lambda a, b:a/b, + float16(2.**-14+2**-23), float16(4)) + + # Overflow errors + assert_raises_fpe('overflow', lambda a, b:a*b, bx16, bx16) + assert_raises_fpe('overflow', lambda a, b:a*b, bx16, by16) + assert_raises_fpe('overflow', lambda a, b:a*b, by16, bx16) + assert_raises_fpe('overflow', lambda a, b:a*b, by16, by16) + assert_raises_fpe('overflow', lambda a, b:a/b, bx16, sx16) + assert_raises_fpe('overflow', lambda a, b:a/b, bx16, sy16) + assert_raises_fpe('overflow', lambda a, b:a/b, by16, sx16) + assert_raises_fpe('overflow', lambda a, b:a/b, by16, sy16) + assert_raises_fpe('overflow', lambda a, b:a+b, + float16(65504), float16(17)) + assert_raises_fpe('overflow', lambda a, b:a-b, + float16(-65504), float16(17)) + assert_raises_fpe('overflow', np.nextafter, float16(65504), float16(np.inf)) + assert_raises_fpe('overflow', np.nextafter, float16(-65504), float16(-np.inf)) + assert_raises_fpe('overflow', np.spacing, float16(65504)) + + # Invalid value errors + assert_raises_fpe('invalid', np.divide, float16(np.inf), float16(np.inf)) + assert_raises_fpe('invalid', np.spacing, float16(np.inf)) + assert_raises_fpe('invalid', np.spacing, float16(np.nan)) + + # These should not raise + float16(65472)+float16(32) + float16(2**-13)/float16(2) + float16(2**-14)/float16(2**10) + np.spacing(float16(-65504)) + np.nextafter(float16(65504), float16(-np.inf)) + np.nextafter(float16(-65504), float16(np.inf)) + np.nextafter(float16(np.inf), float16(0)) + np.nextafter(float16(-np.inf), float16(0)) + np.nextafter(float16(0), float16(np.nan)) + np.nextafter(float16(np.nan), float16(0)) + float16(2**-14)/float16(2**10) + float16(-2**-14)/float16(2**10) + float16(2**-14+2**-23)/float16(2) + float16(-2**-14-2**-23)/float16(2) + + def test_half_array_interface(self): + """Test that half is compatible with __array_interface__""" + class Dummy: + pass + + a = np.ones((1,), dtype=float16) + b = Dummy() + b.__array_interface__ = a.__array_interface__ + c = np.array(b) + assert_(c.dtype == float16) + assert_equal(a, c) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_hashtable.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_hashtable.py new file mode 100644 index 0000000000000000000000000000000000000000..e75cfceea4124976f486fecd748ccf318fffa4a0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_hashtable.py @@ -0,0 +1,30 @@ +import pytest + +import random +from numpy._core._multiarray_tests import identityhash_tester + + +@pytest.mark.parametrize("key_length", [1, 3, 6]) +@pytest.mark.parametrize("length", [1, 16, 2000]) +def test_identity_hashtable(key_length, length): + # use a 30 object pool for everything (duplicates will happen) + pool = [object() for i in range(20)] + keys_vals = [] + for i in range(length): + keys = tuple(random.choices(pool, k=key_length)) + keys_vals.append((keys, random.choice(pool))) + + dictionary = dict(keys_vals) + + # add a random item at the end: + keys_vals.append(random.choice(keys_vals)) + # the expected one could be different with duplicates: + expected = dictionary[keys_vals[-1][0]] + + res = identityhash_tester(key_length, keys_vals, replace=True) + assert res is expected + + # check that ensuring one duplicate definitely raises: + keys_vals.insert(0, keys_vals[-2]) + with pytest.raises(RuntimeError): + identityhash_tester(key_length, keys_vals) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_indexerrors.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_indexerrors.py new file mode 100644 index 0000000000000000000000000000000000000000..c1faa9555813a649662e8809df7c9c552c28ee48 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_indexerrors.py @@ -0,0 +1,124 @@ +import numpy as np +from numpy.testing import ( + assert_raises, assert_raises_regex, + ) + + +class TestIndexErrors: + '''Tests to exercise indexerrors not covered by other tests.''' + + def test_arraytypes_fasttake(self): + 'take from a 0-length dimension' + x = np.empty((2, 3, 0, 4)) + assert_raises(IndexError, x.take, [0], axis=2) + assert_raises(IndexError, x.take, [1], axis=2) + assert_raises(IndexError, x.take, [0], axis=2, mode='wrap') + assert_raises(IndexError, x.take, [0], axis=2, mode='clip') + + def test_take_from_object(self): + # Check exception taking from object array + d = np.zeros(5, dtype=object) + assert_raises(IndexError, d.take, [6]) + + # Check exception taking from 0-d array + d = np.zeros((5, 0), dtype=object) + assert_raises(IndexError, d.take, [1], axis=1) + assert_raises(IndexError, d.take, [0], axis=1) + assert_raises(IndexError, d.take, [0]) + assert_raises(IndexError, d.take, [0], mode='wrap') + assert_raises(IndexError, d.take, [0], mode='clip') + + def test_multiindex_exceptions(self): + a = np.empty(5, dtype=object) + assert_raises(IndexError, a.item, 20) + a = np.empty((5, 0), dtype=object) + assert_raises(IndexError, a.item, (0, 0)) + + def test_put_exceptions(self): + a = np.zeros((5, 5)) + assert_raises(IndexError, a.put, 100, 0) + a = np.zeros((5, 5), dtype=object) + assert_raises(IndexError, a.put, 100, 0) + a = np.zeros((5, 5, 0)) + assert_raises(IndexError, a.put, 100, 0) + a = np.zeros((5, 5, 0), dtype=object) + assert_raises(IndexError, a.put, 100, 0) + + def test_iterators_exceptions(self): + "cases in iterators.c" + def assign(obj, ind, val): + obj[ind] = val + + a = np.zeros([1, 2, 3]) + assert_raises(IndexError, lambda: a[0, 5, None, 2]) + assert_raises(IndexError, lambda: a[0, 5, 0, 2]) + assert_raises(IndexError, lambda: assign(a, (0, 5, None, 2), 1)) + assert_raises(IndexError, lambda: assign(a, (0, 5, 0, 2), 1)) + + a = np.zeros([1, 0, 3]) + assert_raises(IndexError, lambda: a[0, 0, None, 2]) + assert_raises(IndexError, lambda: assign(a, (0, 0, None, 2), 1)) + + a = np.zeros([1, 2, 3]) + assert_raises(IndexError, lambda: a.flat[10]) + assert_raises(IndexError, lambda: assign(a.flat, 10, 5)) + a = np.zeros([1, 0, 3]) + assert_raises(IndexError, lambda: a.flat[10]) + assert_raises(IndexError, lambda: assign(a.flat, 10, 5)) + + a = np.zeros([1, 2, 3]) + assert_raises(IndexError, lambda: a.flat[np.array(10)]) + assert_raises(IndexError, lambda: assign(a.flat, np.array(10), 5)) + a = np.zeros([1, 0, 3]) + assert_raises(IndexError, lambda: a.flat[np.array(10)]) + assert_raises(IndexError, lambda: assign(a.flat, np.array(10), 5)) + + a = np.zeros([1, 2, 3]) + assert_raises(IndexError, lambda: a.flat[np.array([10])]) + assert_raises(IndexError, lambda: assign(a.flat, np.array([10]), 5)) + a = np.zeros([1, 0, 3]) + assert_raises(IndexError, lambda: a.flat[np.array([10])]) + assert_raises(IndexError, lambda: assign(a.flat, np.array([10]), 5)) + + def test_mapping(self): + "cases from mapping.c" + + def assign(obj, ind, val): + obj[ind] = val + + a = np.zeros((0, 10)) + assert_raises(IndexError, lambda: a[12]) + + a = np.zeros((3, 5)) + assert_raises(IndexError, lambda: a[(10, 20)]) + assert_raises(IndexError, lambda: assign(a, (10, 20), 1)) + a = np.zeros((3, 0)) + assert_raises(IndexError, lambda: a[(1, 0)]) + assert_raises(IndexError, lambda: assign(a, (1, 0), 1)) + + a = np.zeros((10,)) + assert_raises(IndexError, lambda: assign(a, 10, 1)) + a = np.zeros((0,)) + assert_raises(IndexError, lambda: assign(a, 10, 1)) + + a = np.zeros((3, 5)) + assert_raises(IndexError, lambda: a[(1, [1, 20])]) + assert_raises(IndexError, lambda: assign(a, (1, [1, 20]), 1)) + a = np.zeros((3, 0)) + assert_raises(IndexError, lambda: a[(1, [0, 1])]) + assert_raises(IndexError, lambda: assign(a, (1, [0, 1]), 1)) + + def test_mapping_error_message(self): + a = np.zeros((3, 5)) + index = (1, 2, 3, 4, 5) + assert_raises_regex( + IndexError, + "too many indices for array: " + "array is 2-dimensional, but 5 were indexed", + lambda: a[index]) + + def test_methods(self): + "cases from methods.c" + + a = np.zeros((3, 3)) + assert_raises(IndexError, lambda: a.item(100)) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_indexing.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_indexing.py new file mode 100644 index 0000000000000000000000000000000000000000..9611f75221d2863c8c53c8c251be4906317b7521 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_indexing.py @@ -0,0 +1,1440 @@ +import sys +import warnings +import functools +import operator + +import pytest + +import numpy as np +from numpy._core._multiarray_tests import array_indexing +from itertools import product +from numpy.exceptions import ComplexWarning, VisibleDeprecationWarning +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_raises_regex, + assert_array_equal, assert_warns, HAS_REFCOUNT, IS_WASM + ) + + +class TestIndexing: + def test_index_no_floats(self): + a = np.array([[[5]]]) + + assert_raises(IndexError, lambda: a[0.0]) + assert_raises(IndexError, lambda: a[0, 0.0]) + assert_raises(IndexError, lambda: a[0.0, 0]) + assert_raises(IndexError, lambda: a[0.0,:]) + assert_raises(IndexError, lambda: a[:, 0.0]) + assert_raises(IndexError, lambda: a[:, 0.0,:]) + assert_raises(IndexError, lambda: a[0.0,:,:]) + assert_raises(IndexError, lambda: a[0, 0, 0.0]) + assert_raises(IndexError, lambda: a[0.0, 0, 0]) + assert_raises(IndexError, lambda: a[0, 0.0, 0]) + assert_raises(IndexError, lambda: a[-1.4]) + assert_raises(IndexError, lambda: a[0, -1.4]) + assert_raises(IndexError, lambda: a[-1.4, 0]) + assert_raises(IndexError, lambda: a[-1.4,:]) + assert_raises(IndexError, lambda: a[:, -1.4]) + assert_raises(IndexError, lambda: a[:, -1.4,:]) + assert_raises(IndexError, lambda: a[-1.4,:,:]) + assert_raises(IndexError, lambda: a[0, 0, -1.4]) + assert_raises(IndexError, lambda: a[-1.4, 0, 0]) + assert_raises(IndexError, lambda: a[0, -1.4, 0]) + assert_raises(IndexError, lambda: a[0.0:, 0.0]) + assert_raises(IndexError, lambda: a[0.0:, 0.0,:]) + + def test_slicing_no_floats(self): + a = np.array([[5]]) + + # start as float. + assert_raises(TypeError, lambda: a[0.0:]) + assert_raises(TypeError, lambda: a[0:, 0.0:2]) + assert_raises(TypeError, lambda: a[0.0::2, :0]) + assert_raises(TypeError, lambda: a[0.0:1:2,:]) + assert_raises(TypeError, lambda: a[:, 0.0:]) + # stop as float. + assert_raises(TypeError, lambda: a[:0.0]) + assert_raises(TypeError, lambda: a[:0, 1:2.0]) + assert_raises(TypeError, lambda: a[:0.0:2, :0]) + assert_raises(TypeError, lambda: a[:0.0,:]) + assert_raises(TypeError, lambda: a[:, 0:4.0:2]) + # step as float. + assert_raises(TypeError, lambda: a[::1.0]) + assert_raises(TypeError, lambda: a[0:, :2:2.0]) + assert_raises(TypeError, lambda: a[1::4.0, :0]) + assert_raises(TypeError, lambda: a[::5.0,:]) + assert_raises(TypeError, lambda: a[:, 0:4:2.0]) + # mixed. + assert_raises(TypeError, lambda: a[1.0:2:2.0]) + assert_raises(TypeError, lambda: a[1.0::2.0]) + assert_raises(TypeError, lambda: a[0:, :2.0:2.0]) + assert_raises(TypeError, lambda: a[1.0:1:4.0, :0]) + assert_raises(TypeError, lambda: a[1.0:5.0:5.0,:]) + assert_raises(TypeError, lambda: a[:, 0.4:4.0:2.0]) + # should still get the DeprecationWarning if step = 0. + assert_raises(TypeError, lambda: a[::0.0]) + + def test_index_no_array_to_index(self): + # No non-scalar arrays. + a = np.array([[[1]]]) + + assert_raises(TypeError, lambda: a[a:a:a]) + + def test_none_index(self): + # `None` index adds newaxis + a = np.array([1, 2, 3]) + assert_equal(a[None], a[np.newaxis]) + assert_equal(a[None].ndim, a.ndim + 1) + + def test_empty_tuple_index(self): + # Empty tuple index creates a view + a = np.array([1, 2, 3]) + assert_equal(a[()], a) + assert_(a[()].base is a) + a = np.array(0) + assert_(isinstance(a[()], np.int_)) + + def test_void_scalar_empty_tuple(self): + s = np.zeros((), dtype='V4') + assert_equal(s[()].dtype, s.dtype) + assert_equal(s[()], s) + assert_equal(type(s[...]), np.ndarray) + + def test_same_kind_index_casting(self): + # Indexes should be cast with same-kind and not safe, even if that + # is somewhat unsafe. So test various different code paths. + index = np.arange(5) + u_index = index.astype(np.uintp) + arr = np.arange(10) + + assert_array_equal(arr[index], arr[u_index]) + arr[u_index] = np.arange(5) + assert_array_equal(arr, np.arange(10)) + + arr = np.arange(10).reshape(5, 2) + assert_array_equal(arr[index], arr[u_index]) + + arr[u_index] = np.arange(5)[:,None] + assert_array_equal(arr, np.arange(5)[:,None].repeat(2, axis=1)) + + arr = np.arange(25).reshape(5, 5) + assert_array_equal(arr[u_index, u_index], arr[index, index]) + + def test_empty_fancy_index(self): + # Empty list index creates an empty array + # with the same dtype (but with weird shape) + a = np.array([1, 2, 3]) + assert_equal(a[[]], []) + assert_equal(a[[]].dtype, a.dtype) + + b = np.array([], dtype=np.intp) + assert_equal(a[[]], []) + assert_equal(a[[]].dtype, a.dtype) + + b = np.array([]) + assert_raises(IndexError, a.__getitem__, b) + + def test_gh_26542(self): + a = np.array([0, 1, 2]) + idx = np.array([2, 1, 0]) + a[idx] = a + expected = np.array([2, 1, 0]) + assert_equal(a, expected) + + def test_gh_26542_2d(self): + a = np.array([[0, 1, 2]]) + idx_row = np.zeros(3, dtype=int) + idx_col = np.array([2, 1, 0]) + a[idx_row, idx_col] = a + expected = np.array([[2, 1, 0]]) + assert_equal(a, expected) + + def test_gh_26542_index_overlap(self): + arr = np.arange(100) + expected_vals = np.copy(arr[:-10]) + arr[10:] = arr[:-10] + actual_vals = arr[10:] + assert_equal(actual_vals, expected_vals) + + def test_ellipsis_index(self): + a = np.array([[1, 2, 3], + [4, 5, 6], + [7, 8, 9]]) + assert_(a[...] is not a) + assert_equal(a[...], a) + # `a[...]` was `a` in numpy <1.9. + assert_(a[...].base is a) + + # Slicing with ellipsis can skip an + # arbitrary number of dimensions + assert_equal(a[0, ...], a[0]) + assert_equal(a[0, ...], a[0,:]) + assert_equal(a[..., 0], a[:, 0]) + + # Slicing with ellipsis always results + # in an array, not a scalar + assert_equal(a[0, ..., 1], np.array(2)) + + # Assignment with `(Ellipsis,)` on 0-d arrays + b = np.array(1) + b[(Ellipsis,)] = 2 + assert_equal(b, 2) + + def test_single_int_index(self): + # Single integer index selects one row + a = np.array([[1, 2, 3], + [4, 5, 6], + [7, 8, 9]]) + + assert_equal(a[0], [1, 2, 3]) + assert_equal(a[-1], [7, 8, 9]) + + # Index out of bounds produces IndexError + assert_raises(IndexError, a.__getitem__, 1 << 30) + # Index overflow produces IndexError + assert_raises(IndexError, a.__getitem__, 1 << 64) + + def test_single_bool_index(self): + # Single boolean index + a = np.array([[1, 2, 3], + [4, 5, 6], + [7, 8, 9]]) + + assert_equal(a[np.array(True)], a[None]) + assert_equal(a[np.array(False)], a[None][0:0]) + + def test_boolean_shape_mismatch(self): + arr = np.ones((5, 4, 3)) + + index = np.array([True]) + assert_raises(IndexError, arr.__getitem__, index) + + index = np.array([False] * 6) + assert_raises(IndexError, arr.__getitem__, index) + + index = np.zeros((4, 4), dtype=bool) + assert_raises(IndexError, arr.__getitem__, index) + + assert_raises(IndexError, arr.__getitem__, (slice(None), index)) + + def test_boolean_indexing_onedim(self): + # Indexing a 2-dimensional array with + # boolean array of length one + a = np.array([[ 0., 0., 0.]]) + b = np.array([ True], dtype=bool) + assert_equal(a[b], a) + # boolean assignment + a[b] = 1. + assert_equal(a, [[1., 1., 1.]]) + + def test_boolean_assignment_value_mismatch(self): + # A boolean assignment should fail when the shape of the values + # cannot be broadcast to the subscription. (see also gh-3458) + a = np.arange(4) + + def f(a, v): + a[a > -1] = v + + assert_raises(ValueError, f, a, []) + assert_raises(ValueError, f, a, [1, 2, 3]) + assert_raises(ValueError, f, a[:1], [1, 2, 3]) + + def test_boolean_assignment_needs_api(self): + # See also gh-7666 + # This caused a segfault on Python 2 due to the GIL not being + # held when the iterator does not need it, but the transfer function + # does + arr = np.zeros(1000) + indx = np.zeros(1000, dtype=bool) + indx[:100] = True + arr[indx] = np.ones(100, dtype=object) + + expected = np.zeros(1000) + expected[:100] = 1 + assert_array_equal(arr, expected) + + def test_boolean_indexing_twodim(self): + # Indexing a 2-dimensional array with + # 2-dimensional boolean array + a = np.array([[1, 2, 3], + [4, 5, 6], + [7, 8, 9]]) + b = np.array([[ True, False, True], + [False, True, False], + [ True, False, True]]) + assert_equal(a[b], [1, 3, 5, 7, 9]) + assert_equal(a[b[1]], [[4, 5, 6]]) + assert_equal(a[b[0]], a[b[2]]) + + # boolean assignment + a[b] = 0 + assert_equal(a, [[0, 2, 0], + [4, 0, 6], + [0, 8, 0]]) + + def test_boolean_indexing_list(self): + # Regression test for #13715. It's a use-after-free bug which the + # test won't directly catch, but it will show up in valgrind. + a = np.array([1, 2, 3]) + b = [True, False, True] + # Two variants of the test because the first takes a fast path + assert_equal(a[b], [1, 3]) + assert_equal(a[None, b], [[1, 3]]) + + def test_reverse_strides_and_subspace_bufferinit(self): + # This tests that the strides are not reversed for simple and + # subspace fancy indexing. + a = np.ones(5) + b = np.zeros(5, dtype=np.intp)[::-1] + c = np.arange(5)[::-1] + + a[b] = c + # If the strides are not reversed, the 0 in the arange comes last. + assert_equal(a[0], 0) + + # This also tests that the subspace buffer is initialized: + a = np.ones((5, 2)) + c = np.arange(10).reshape(5, 2)[::-1] + a[b, :] = c + assert_equal(a[0], [0, 1]) + + def test_reversed_strides_result_allocation(self): + # Test a bug when calculating the output strides for a result array + # when the subspace size was 1 (and test other cases as well) + a = np.arange(10)[:, None] + i = np.arange(10)[::-1] + assert_array_equal(a[i], a[i.copy('C')]) + + a = np.arange(20).reshape(-1, 2) + + def test_uncontiguous_subspace_assignment(self): + # During development there was a bug activating a skip logic + # based on ndim instead of size. + a = np.full((3, 4, 2), -1) + b = np.full((3, 4, 2), -1) + + a[[0, 1]] = np.arange(2 * 4 * 2).reshape(2, 4, 2).T + b[[0, 1]] = np.arange(2 * 4 * 2).reshape(2, 4, 2).T.copy() + + assert_equal(a, b) + + def test_too_many_fancy_indices_special_case(self): + # Just documents behaviour, this is a small limitation. + a = np.ones((1,) * 64) # 64 is NPY_MAXDIMS + assert_raises(IndexError, a.__getitem__, (np.array([0]),) * 64) + + def test_scalar_array_bool(self): + # NumPy bools can be used as boolean index (python ones as of yet not) + a = np.array(1) + assert_equal(a[np.bool(True)], a[np.array(True)]) + assert_equal(a[np.bool(False)], a[np.array(False)]) + + # After deprecating bools as integers: + #a = np.array([0,1,2]) + #assert_equal(a[True, :], a[None, :]) + #assert_equal(a[:, True], a[:, None]) + # + #assert_(not np.may_share_memory(a, a[True, :])) + + def test_everything_returns_views(self): + # Before `...` would return a itself. + a = np.arange(5) + + assert_(a is not a[()]) + assert_(a is not a[...]) + assert_(a is not a[:]) + + def test_broaderrors_indexing(self): + a = np.zeros((5, 5)) + assert_raises(IndexError, a.__getitem__, ([0, 1], [0, 1, 2])) + assert_raises(IndexError, a.__setitem__, ([0, 1], [0, 1, 2]), 0) + + def test_trivial_fancy_out_of_bounds(self): + a = np.zeros(5) + ind = np.ones(20, dtype=np.intp) + ind[-1] = 10 + assert_raises(IndexError, a.__getitem__, ind) + assert_raises(IndexError, a.__setitem__, ind, 0) + ind = np.ones(20, dtype=np.intp) + ind[0] = 11 + assert_raises(IndexError, a.__getitem__, ind) + assert_raises(IndexError, a.__setitem__, ind, 0) + + def test_trivial_fancy_not_possible(self): + # Test that the fast path for trivial assignment is not incorrectly + # used when the index is not contiguous or 1D, see also gh-11467. + a = np.arange(6) + idx = np.arange(6, dtype=np.intp).reshape(2, 1, 3)[:, :, 0] + assert_array_equal(a[idx], idx) + + # this case must not go into the fast path, note that idx is + # a non-contiuguous none 1D array here. + a[idx] = -1 + res = np.arange(6) + res[0] = -1 + res[3] = -1 + assert_array_equal(a, res) + + def test_nonbaseclass_values(self): + class SubClass(np.ndarray): + def __array_finalize__(self, old): + # Have array finalize do funny things + self.fill(99) + + a = np.zeros((5, 5)) + s = a.copy().view(type=SubClass) + s.fill(1) + + a[[0, 1, 2, 3, 4], :] = s + assert_((a == 1).all()) + + # Subspace is last, so transposing might want to finalize + a[:, [0, 1, 2, 3, 4]] = s + assert_((a == 1).all()) + + a.fill(0) + a[...] = s + assert_((a == 1).all()) + + def test_array_like_values(self): + # Similar to the above test, but use a memoryview instead + a = np.zeros((5, 5)) + s = np.arange(25, dtype=np.float64).reshape(5, 5) + + a[[0, 1, 2, 3, 4], :] = memoryview(s) + assert_array_equal(a, s) + + a[:, [0, 1, 2, 3, 4]] = memoryview(s) + assert_array_equal(a, s) + + a[...] = memoryview(s) + assert_array_equal(a, s) + + def test_subclass_writeable(self): + d = np.rec.array([('NGC1001', 11), ('NGC1002', 1.), ('NGC1003', 1.)], + dtype=[('target', 'S20'), ('V_mag', '>f4')]) + ind = np.array([False, True, True], dtype=bool) + assert_(d[ind].flags.writeable) + ind = np.array([0, 1]) + assert_(d[ind].flags.writeable) + assert_(d[...].flags.writeable) + assert_(d[0].flags.writeable) + + def test_memory_order(self): + # This is not necessary to preserve. Memory layouts for + # more complex indices are not as simple. + a = np.arange(10) + b = np.arange(10).reshape(5,2).T + assert_(a[b].flags.f_contiguous) + + # Takes a different implementation branch: + a = a.reshape(-1, 1) + assert_(a[b, 0].flags.f_contiguous) + + def test_scalar_return_type(self): + # Full scalar indices should return scalars and object + # arrays should not call PyArray_Return on their items + class Zero: + # The most basic valid indexing + def __index__(self): + return 0 + + z = Zero() + + class ArrayLike: + # Simple array, should behave like the array + def __array__(self, dtype=None, copy=None): + return np.array(0) + + a = np.zeros(()) + assert_(isinstance(a[()], np.float64)) + a = np.zeros(1) + assert_(isinstance(a[z], np.float64)) + a = np.zeros((1, 1)) + assert_(isinstance(a[z, np.array(0)], np.float64)) + assert_(isinstance(a[z, ArrayLike()], np.float64)) + + # And object arrays do not call it too often: + b = np.array(0) + a = np.array(0, dtype=object) + a[()] = b + assert_(isinstance(a[()], np.ndarray)) + a = np.array([b, None]) + assert_(isinstance(a[z], np.ndarray)) + a = np.array([[b, None]]) + assert_(isinstance(a[z, np.array(0)], np.ndarray)) + assert_(isinstance(a[z, ArrayLike()], np.ndarray)) + + def test_small_regressions(self): + # Reference count of intp for index checks + a = np.array([0]) + if HAS_REFCOUNT: + refcount = sys.getrefcount(np.dtype(np.intp)) + # item setting always checks indices in separate function: + a[np.array([0], dtype=np.intp)] = 1 + a[np.array([0], dtype=np.uint8)] = 1 + assert_raises(IndexError, a.__setitem__, + np.array([1], dtype=np.intp), 1) + assert_raises(IndexError, a.__setitem__, + np.array([1], dtype=np.uint8), 1) + + if HAS_REFCOUNT: + assert_equal(sys.getrefcount(np.dtype(np.intp)), refcount) + + def test_unaligned(self): + v = (np.zeros(64, dtype=np.int8) + ord('a'))[1:-7] + d = v.view(np.dtype("S8")) + # unaligned source + x = (np.zeros(16, dtype=np.int8) + ord('a'))[1:-7] + x = x.view(np.dtype("S8")) + x[...] = np.array("b" * 8, dtype="S") + b = np.arange(d.size) + #trivial + assert_equal(d[b], d) + d[b] = x + # nontrivial + # unaligned index array + b = np.zeros(d.size + 1).view(np.int8)[1:-(np.intp(0).itemsize - 1)] + b = b.view(np.intp)[:d.size] + b[...] = np.arange(d.size) + assert_equal(d[b.astype(np.int16)], d) + d[b.astype(np.int16)] = x + # boolean + d[b % 2 == 0] + d[b % 2 == 0] = x[::2] + + def test_tuple_subclass(self): + arr = np.ones((5, 5)) + + # A tuple subclass should also be an nd-index + class TupleSubclass(tuple): + pass + index = ([1], [1]) + index = TupleSubclass(index) + assert_(arr[index].shape == (1,)) + # Unlike the non nd-index: + assert_(arr[index,].shape != (1,)) + + def test_broken_sequence_not_nd_index(self): + # See gh-5063: + # If we have an object which claims to be a sequence, but fails + # on item getting, this should not be converted to an nd-index (tuple) + # If this object happens to be a valid index otherwise, it should work + # This object here is very dubious and probably bad though: + class SequenceLike: + def __index__(self): + return 0 + + def __len__(self): + return 1 + + def __getitem__(self, item): + raise IndexError('Not possible') + + arr = np.arange(10) + assert_array_equal(arr[SequenceLike()], arr[SequenceLike(),]) + + # also test that field indexing does not segfault + # for a similar reason, by indexing a structured array + arr = np.zeros((1,), dtype=[('f1', 'i8'), ('f2', 'i8')]) + assert_array_equal(arr[SequenceLike()], arr[SequenceLike(),]) + + def test_indexing_array_weird_strides(self): + # See also gh-6221 + # the shapes used here come from the issue and create the correct + # size for the iterator buffering size. + x = np.ones(10) + x2 = np.ones((10, 2)) + ind = np.arange(10)[:, None, None, None] + ind = np.broadcast_to(ind, (10, 55, 4, 4)) + + # single advanced index case + assert_array_equal(x[ind], x[ind.copy()]) + # higher dimensional advanced index + zind = np.zeros(4, dtype=np.intp) + assert_array_equal(x2[ind, zind], x2[ind.copy(), zind]) + + def test_indexing_array_negative_strides(self): + # From gh-8264, + # core dumps if negative strides are used in iteration + arro = np.zeros((4, 4)) + arr = arro[::-1, ::-1] + + slices = (slice(None), [0, 1, 2, 3]) + arr[slices] = 10 + assert_array_equal(arr, 10.) + + def test_character_assignment(self): + # This is an example a function going through CopyObject which + # used to have an untested special path for scalars + # (the character special dtype case, should be deprecated probably) + arr = np.zeros((1, 5), dtype="c") + arr[0] = np.str_("asdfg") # must assign as a sequence + assert_array_equal(arr[0], np.array("asdfg", dtype="c")) + assert arr[0, 1] == b"s" # make sure not all were set to "a" for both + + @pytest.mark.parametrize("index", + [True, False, np.array([0])]) + @pytest.mark.parametrize("num", [64, 80]) + @pytest.mark.parametrize("original_ndim", [1, 64]) + def test_too_many_advanced_indices(self, index, num, original_ndim): + # These are limitations based on the number of arguments we can process. + # For `num=32` (and all boolean cases), the result is actually define; + # but the use of NpyIter (NPY_MAXARGS) limits it for technical reasons. + arr = np.ones((1,) * original_ndim) + with pytest.raises(IndexError): + arr[(index,) * num] + with pytest.raises(IndexError): + arr[(index,) * num] = 1. + + @pytest.mark.skipif(IS_WASM, reason="no threading") + def test_structured_advanced_indexing(self): + # Test that copyswap(n) used by integer array indexing is threadsafe + # for structured datatypes, see gh-15387. This test can behave randomly. + from concurrent.futures import ThreadPoolExecutor + + # Create a deeply nested dtype to make a failure more likely: + dt = np.dtype([("", "f8")]) + dt = np.dtype([("", dt)] * 2) + dt = np.dtype([("", dt)] * 2) + # The array should be large enough to likely run into threading issues + arr = np.random.uniform(size=(6000, 8)).view(dt)[:, 0] + + rng = np.random.default_rng() + def func(arr): + indx = rng.integers(0, len(arr), size=6000, dtype=np.intp) + arr[indx] + + tpe = ThreadPoolExecutor(max_workers=8) + futures = [tpe.submit(func, arr) for _ in range(10)] + for f in futures: + f.result() + + assert arr.dtype is dt + + def test_nontuple_ndindex(self): + a = np.arange(25).reshape((5, 5)) + assert_equal(a[[0, 1]], np.array([a[0], a[1]])) + assert_equal(a[[0, 1], [0, 1]], np.array([0, 6])) + assert_raises(IndexError, a.__getitem__, [slice(None)]) + + +class TestFieldIndexing: + def test_scalar_return_type(self): + # Field access on an array should return an array, even if it + # is 0-d. + a = np.zeros((), [('a','f8')]) + assert_(isinstance(a['a'], np.ndarray)) + assert_(isinstance(a[['a']], np.ndarray)) + + +class TestBroadcastedAssignments: + def assign(self, a, ind, val): + a[ind] = val + return a + + def test_prepending_ones(self): + a = np.zeros((3, 2)) + + a[...] = np.ones((1, 3, 2)) + # Fancy with subspace with and without transpose + a[[0, 1, 2], :] = np.ones((1, 3, 2)) + a[:, [0, 1]] = np.ones((1, 3, 2)) + # Fancy without subspace (with broadcasting) + a[[[0], [1], [2]], [0, 1]] = np.ones((1, 3, 2)) + + def test_prepend_not_one(self): + assign = self.assign + s_ = np.s_ + a = np.zeros(5) + + # Too large and not only ones. + assert_raises(ValueError, assign, a, s_[...], np.ones((2, 1))) + assert_raises(ValueError, assign, a, s_[[1, 2, 3],], np.ones((2, 1))) + assert_raises(ValueError, assign, a, s_[[[1], [2]],], np.ones((2,2,1))) + + def test_simple_broadcasting_errors(self): + assign = self.assign + s_ = np.s_ + a = np.zeros((5, 1)) + + assert_raises(ValueError, assign, a, s_[...], np.zeros((5, 2))) + assert_raises(ValueError, assign, a, s_[...], np.zeros((5, 0))) + assert_raises(ValueError, assign, a, s_[:, [0]], np.zeros((5, 2))) + assert_raises(ValueError, assign, a, s_[:, [0]], np.zeros((5, 0))) + assert_raises(ValueError, assign, a, s_[[0], :], np.zeros((2, 1))) + + @pytest.mark.parametrize("index", [ + (..., [1, 2], slice(None)), + ([0, 1], ..., 0), + (..., [1, 2], [1, 2])]) + def test_broadcast_error_reports_correct_shape(self, index): + values = np.zeros((100, 100)) # will never broadcast below + + arr = np.zeros((3, 4, 5, 6, 7)) + # We currently report without any spaces (could be changed) + shape_str = str(arr[index].shape).replace(" ", "") + + with pytest.raises(ValueError) as e: + arr[index] = values + + assert str(e.value).endswith(shape_str) + + def test_index_is_larger(self): + # Simple case of fancy index broadcasting of the index. + a = np.zeros((5, 5)) + a[[[0], [1], [2]], [0, 1, 2]] = [2, 3, 4] + + assert_((a[:3, :3] == [2, 3, 4]).all()) + + def test_broadcast_subspace(self): + a = np.zeros((100, 100)) + v = np.arange(100)[:,None] + b = np.arange(100)[::-1] + a[b] = v + assert_((a[::-1] == v).all()) + + +class TestSubclasses: + def test_basic(self): + # Test that indexing in various ways produces SubClass instances, + # and that the base is set up correctly: the original subclass + # instance for views, and a new ndarray for advanced/boolean indexing + # where a copy was made (latter a regression test for gh-11983). + class SubClass(np.ndarray): + pass + + a = np.arange(5) + s = a.view(SubClass) + s_slice = s[:3] + assert_(type(s_slice) is SubClass) + assert_(s_slice.base is s) + assert_array_equal(s_slice, a[:3]) + + s_fancy = s[[0, 1, 2]] + assert_(type(s_fancy) is SubClass) + assert_(s_fancy.base is not s) + assert_(type(s_fancy.base) is np.ndarray) + assert_array_equal(s_fancy, a[[0, 1, 2]]) + assert_array_equal(s_fancy.base, a[[0, 1, 2]]) + + s_bool = s[s > 0] + assert_(type(s_bool) is SubClass) + assert_(s_bool.base is not s) + assert_(type(s_bool.base) is np.ndarray) + assert_array_equal(s_bool, a[a > 0]) + assert_array_equal(s_bool.base, a[a > 0]) + + def test_fancy_on_read_only(self): + # Test that fancy indexing on read-only SubClass does not make a + # read-only copy (gh-14132) + class SubClass(np.ndarray): + pass + + a = np.arange(5) + s = a.view(SubClass) + s.flags.writeable = False + s_fancy = s[[0, 1, 2]] + assert_(s_fancy.flags.writeable) + + + def test_finalize_gets_full_info(self): + # Array finalize should be called on the filled array. + class SubClass(np.ndarray): + def __array_finalize__(self, old): + self.finalize_status = np.array(self) + self.old = old + + s = np.arange(10).view(SubClass) + new_s = s[:3] + assert_array_equal(new_s.finalize_status, new_s) + assert_array_equal(new_s.old, s) + + new_s = s[[0,1,2,3]] + assert_array_equal(new_s.finalize_status, new_s) + assert_array_equal(new_s.old, s) + + new_s = s[s > 0] + assert_array_equal(new_s.finalize_status, new_s) + assert_array_equal(new_s.old, s) + + +class TestFancyIndexingCast: + def test_boolean_index_cast_assign(self): + # Setup the boolean index and float arrays. + shape = (8, 63) + bool_index = np.zeros(shape).astype(bool) + bool_index[0, 1] = True + zero_array = np.zeros(shape) + + # Assigning float is fine. + zero_array[bool_index] = np.array([1]) + assert_equal(zero_array[0, 1], 1) + + # Fancy indexing works, although we get a cast warning. + assert_warns(ComplexWarning, + zero_array.__setitem__, ([0], [1]), np.array([2 + 1j])) + assert_equal(zero_array[0, 1], 2) # No complex part + + # Cast complex to float, throwing away the imaginary portion. + assert_warns(ComplexWarning, + zero_array.__setitem__, bool_index, np.array([1j])) + assert_equal(zero_array[0, 1], 0) + +class TestFancyIndexingEquivalence: + def test_object_assign(self): + # Check that the field and object special case using copyto is active. + # The right hand side cannot be converted to an array here. + a = np.arange(5, dtype=object) + b = a.copy() + a[:3] = [1, (1,2), 3] + b[[0, 1, 2]] = [1, (1,2), 3] + assert_array_equal(a, b) + + # test same for subspace fancy indexing + b = np.arange(5, dtype=object)[None, :] + b[[0], :3] = [[1, (1,2), 3]] + assert_array_equal(a, b[0]) + + # Check that swapping of axes works. + # There was a bug that made the later assignment throw a ValueError + # do to an incorrectly transposed temporary right hand side (gh-5714) + b = b.T + b[:3, [0]] = [[1], [(1,2)], [3]] + assert_array_equal(a, b[:, 0]) + + # Another test for the memory order of the subspace + arr = np.ones((3, 4, 5), dtype=object) + # Equivalent slicing assignment for comparison + cmp_arr = arr.copy() + cmp_arr[:1, ...] = [[[1], [2], [3], [4]]] + arr[[0], ...] = [[[1], [2], [3], [4]]] + assert_array_equal(arr, cmp_arr) + arr = arr.copy('F') + arr[[0], ...] = [[[1], [2], [3], [4]]] + assert_array_equal(arr, cmp_arr) + + def test_cast_equivalence(self): + # Yes, normal slicing uses unsafe casting. + a = np.arange(5) + b = a.copy() + + a[:3] = np.array(['2', '-3', '-1']) + b[[0, 2, 1]] = np.array(['2', '-1', '-3']) + assert_array_equal(a, b) + + # test the same for subspace fancy indexing + b = np.arange(5)[None, :] + b[[0], :3] = np.array([['2', '-3', '-1']]) + assert_array_equal(a, b[0]) + + +class TestMultiIndexingAutomated: + """ + These tests use code to mimic the C-Code indexing for selection. + + NOTE: + + * This still lacks tests for complex item setting. + * If you change behavior of indexing, you might want to modify + these tests to try more combinations. + * Behavior was written to match numpy version 1.8. (though a + first version matched 1.7.) + * Only tuple indices are supported by the mimicking code. + (and tested as of writing this) + * Error types should match most of the time as long as there + is only one error. For multiple errors, what gets raised + will usually not be the same one. They are *not* tested. + + Update 2016-11-30: It is probably not worth maintaining this test + indefinitely and it can be dropped if maintenance becomes a burden. + + """ + + def setup_method(self): + self.a = np.arange(np.prod([3, 1, 5, 6])).reshape(3, 1, 5, 6) + self.b = np.empty((3, 0, 5, 6)) + self.complex_indices = ['skip', Ellipsis, + 0, + # Boolean indices, up to 3-d for some special cases of eating up + # dimensions, also need to test all False + np.array([True, False, False]), + np.array([[True, False], [False, True]]), + np.array([[[False, False], [False, False]]]), + # Some slices: + slice(-5, 5, 2), + slice(1, 1, 100), + slice(4, -1, -2), + slice(None, None, -3), + # Some Fancy indexes: + np.empty((0, 1, 1), dtype=np.intp), # empty and can be broadcast + np.array([0, 1, -2]), + np.array([[2], [0], [1]]), + np.array([[0, -1], [0, 1]], dtype=np.dtype('intp').newbyteorder()), + np.array([2, -1], dtype=np.int8), + np.zeros([1]*31, dtype=int), # trigger too large array. + np.array([0., 1.])] # invalid datatype + # Some simpler indices that still cover a bit more + self.simple_indices = [Ellipsis, None, -1, [1], np.array([True]), + 'skip'] + # Very simple ones to fill the rest: + self.fill_indices = [slice(None, None), 0] + + def _get_multi_index(self, arr, indices): + """Mimic multi dimensional indexing. + + Parameters + ---------- + arr : ndarray + Array to be indexed. + indices : tuple of index objects + + Returns + ------- + out : ndarray + An array equivalent to the indexing operation (but always a copy). + `arr[indices]` should be identical. + no_copy : bool + Whether the indexing operation requires a copy. If this is `True`, + `np.may_share_memory(arr, arr[indices])` should be `True` (with + some exceptions for scalars and possibly 0-d arrays). + + Notes + ----- + While the function may mostly match the errors of normal indexing this + is generally not the case. + """ + in_indices = list(indices) + indices = [] + # if False, this is a fancy or boolean index + no_copy = True + # number of fancy/scalar indexes that are not consecutive + num_fancy = 0 + # number of dimensions indexed by a "fancy" index + fancy_dim = 0 + # NOTE: This is a funny twist (and probably OK to change). + # The boolean array has illegal indexes, but this is + # allowed if the broadcast fancy-indices are 0-sized. + # This variable is to catch that case. + error_unless_broadcast_to_empty = False + + # We need to handle Ellipsis and make arrays from indices, also + # check if this is fancy indexing (set no_copy). + ndim = 0 + ellipsis_pos = None # define here mostly to replace all but first. + for i, indx in enumerate(in_indices): + if indx is None: + continue + if isinstance(indx, np.ndarray) and indx.dtype == bool: + no_copy = False + if indx.ndim == 0: + raise IndexError + # boolean indices can have higher dimensions + ndim += indx.ndim + fancy_dim += indx.ndim + continue + if indx is Ellipsis: + if ellipsis_pos is None: + ellipsis_pos = i + continue # do not increment ndim counter + raise IndexError + if isinstance(indx, slice): + ndim += 1 + continue + if not isinstance(indx, np.ndarray): + # This could be open for changes in numpy. + # numpy should maybe raise an error if casting to intp + # is not safe. It rejects np.array([1., 2.]) but not + # [1., 2.] as index (same for ie. np.take). + # (Note the importance of empty lists if changing this here) + try: + indx = np.array(indx, dtype=np.intp) + except ValueError: + raise IndexError + in_indices[i] = indx + elif indx.dtype.kind != 'b' and indx.dtype.kind != 'i': + raise IndexError('arrays used as indices must be of ' + 'integer (or boolean) type') + if indx.ndim != 0: + no_copy = False + ndim += 1 + fancy_dim += 1 + + if arr.ndim - ndim < 0: + # we can't take more dimensions then we have, not even for 0-d + # arrays. since a[()] makes sense, but not a[(),]. We will + # raise an error later on, unless a broadcasting error occurs + # first. + raise IndexError + + if ndim == 0 and None not in in_indices: + # Well we have no indexes or one Ellipsis. This is legal. + return arr.copy(), no_copy + + if ellipsis_pos is not None: + in_indices[ellipsis_pos:ellipsis_pos+1] = ([slice(None, None)] * + (arr.ndim - ndim)) + + for ax, indx in enumerate(in_indices): + if isinstance(indx, slice): + # convert to an index array + indx = np.arange(*indx.indices(arr.shape[ax])) + indices.append(['s', indx]) + continue + elif indx is None: + # this is like taking a slice with one element from a new axis: + indices.append(['n', np.array([0], dtype=np.intp)]) + arr = arr.reshape((arr.shape[:ax] + (1,) + arr.shape[ax:])) + continue + if isinstance(indx, np.ndarray) and indx.dtype == bool: + if indx.shape != arr.shape[ax:ax+indx.ndim]: + raise IndexError + + try: + flat_indx = np.ravel_multi_index(np.nonzero(indx), + arr.shape[ax:ax+indx.ndim], mode='raise') + except Exception: + error_unless_broadcast_to_empty = True + # fill with 0s instead, and raise error later + flat_indx = np.array([0]*indx.sum(), dtype=np.intp) + # concatenate axis into a single one: + if indx.ndim != 0: + arr = arr.reshape((arr.shape[:ax] + + (np.prod(arr.shape[ax:ax+indx.ndim]),) + + arr.shape[ax+indx.ndim:])) + indx = flat_indx + else: + # This could be changed, a 0-d boolean index can + # make sense (even outside the 0-d indexed array case) + # Note that originally this is could be interpreted as + # integer in the full integer special case. + raise IndexError + else: + # If the index is a singleton, the bounds check is done + # before the broadcasting. This used to be different in <1.9 + if indx.ndim == 0: + if indx >= arr.shape[ax] or indx < -arr.shape[ax]: + raise IndexError + if indx.ndim == 0: + # The index is a scalar. This used to be two fold, but if + # fancy indexing was active, the check was done later, + # possibly after broadcasting it away (1.7. or earlier). + # Now it is always done. + if indx >= arr.shape[ax] or indx < - arr.shape[ax]: + raise IndexError + if (len(indices) > 0 and + indices[-1][0] == 'f' and + ax != ellipsis_pos): + # NOTE: There could still have been a 0-sized Ellipsis + # between them. Checked that with ellipsis_pos. + indices[-1].append(indx) + else: + # We have a fancy index that is not after an existing one. + # NOTE: A 0-d array triggers this as well, while one may + # expect it to not trigger it, since a scalar would not be + # considered fancy indexing. + num_fancy += 1 + indices.append(['f', indx]) + + if num_fancy > 1 and not no_copy: + # We have to flush the fancy indexes left + new_indices = indices[:] + axes = list(range(arr.ndim)) + fancy_axes = [] + new_indices.insert(0, ['f']) + ni = 0 + ai = 0 + for indx in indices: + ni += 1 + if indx[0] == 'f': + new_indices[0].extend(indx[1:]) + del new_indices[ni] + ni -= 1 + for ax in range(ai, ai + len(indx[1:])): + fancy_axes.append(ax) + axes.remove(ax) + ai += len(indx) - 1 # axis we are at + indices = new_indices + # and now we need to transpose arr: + arr = arr.transpose(*(fancy_axes + axes)) + + # We only have one 'f' index now and arr is transposed accordingly. + # Now handle newaxis by reshaping... + ax = 0 + for indx in indices: + if indx[0] == 'f': + if len(indx) == 1: + continue + # First of all, reshape arr to combine fancy axes into one: + orig_shape = arr.shape + orig_slice = orig_shape[ax:ax + len(indx[1:])] + arr = arr.reshape((arr.shape[:ax] + + (np.prod(orig_slice).astype(int),) + + arr.shape[ax + len(indx[1:]):])) + + # Check if broadcasting works + res = np.broadcast(*indx[1:]) + # unfortunately the indices might be out of bounds. So check + # that first, and use mode='wrap' then. However only if + # there are any indices... + if res.size != 0: + if error_unless_broadcast_to_empty: + raise IndexError + for _indx, _size in zip(indx[1:], orig_slice): + if _indx.size == 0: + continue + if np.any(_indx >= _size) or np.any(_indx < -_size): + raise IndexError + if len(indx[1:]) == len(orig_slice): + if np.prod(orig_slice) == 0: + # Work around for a crash or IndexError with 'wrap' + # in some 0-sized cases. + try: + mi = np.ravel_multi_index(indx[1:], orig_slice, + mode='raise') + except Exception: + # This happens with 0-sized orig_slice (sometimes?) + # here it is a ValueError, but indexing gives a: + raise IndexError('invalid index into 0-sized') + else: + mi = np.ravel_multi_index(indx[1:], orig_slice, + mode='wrap') + else: + # Maybe never happens... + raise ValueError + arr = arr.take(mi.ravel(), axis=ax) + try: + arr = arr.reshape((arr.shape[:ax] + + mi.shape + + arr.shape[ax+1:])) + except ValueError: + # too many dimensions, probably + raise IndexError + ax += mi.ndim + continue + + # If we are here, we have a 1D array for take: + arr = arr.take(indx[1], axis=ax) + ax += 1 + + return arr, no_copy + + def _check_multi_index(self, arr, index): + """Check a multi index item getting and simple setting. + + Parameters + ---------- + arr : ndarray + Array to be indexed, must be a reshaped arange. + index : tuple of indexing objects + Index being tested. + """ + # Test item getting + try: + mimic_get, no_copy = self._get_multi_index(arr, index) + except Exception as e: + if HAS_REFCOUNT: + prev_refcount = sys.getrefcount(arr) + assert_raises(type(e), arr.__getitem__, index) + assert_raises(type(e), arr.__setitem__, index, 0) + if HAS_REFCOUNT: + assert_equal(prev_refcount, sys.getrefcount(arr)) + return + + self._compare_index_result(arr, index, mimic_get, no_copy) + + def _check_single_index(self, arr, index): + """Check a single index item getting and simple setting. + + Parameters + ---------- + arr : ndarray + Array to be indexed, must be an arange. + index : indexing object + Index being tested. Must be a single index and not a tuple + of indexing objects (see also `_check_multi_index`). + """ + try: + mimic_get, no_copy = self._get_multi_index(arr, (index,)) + except Exception as e: + if HAS_REFCOUNT: + prev_refcount = sys.getrefcount(arr) + assert_raises(type(e), arr.__getitem__, index) + assert_raises(type(e), arr.__setitem__, index, 0) + if HAS_REFCOUNT: + assert_equal(prev_refcount, sys.getrefcount(arr)) + return + + self._compare_index_result(arr, index, mimic_get, no_copy) + + def _compare_index_result(self, arr, index, mimic_get, no_copy): + """Compare mimicked result to indexing result. + """ + arr = arr.copy() + indexed_arr = arr[index] + assert_array_equal(indexed_arr, mimic_get) + # Check if we got a view, unless its a 0-sized or 0-d array. + # (then its not a view, and that does not matter) + if indexed_arr.size != 0 and indexed_arr.ndim != 0: + assert_(np.may_share_memory(indexed_arr, arr) == no_copy) + # Check reference count of the original array + if HAS_REFCOUNT: + if no_copy: + # refcount increases by one: + assert_equal(sys.getrefcount(arr), 3) + else: + assert_equal(sys.getrefcount(arr), 2) + + # Test non-broadcast setitem: + b = arr.copy() + b[index] = mimic_get + 1000 + if b.size == 0: + return # nothing to compare here... + if no_copy and indexed_arr.ndim != 0: + # change indexed_arr in-place to manipulate original: + indexed_arr += 1000 + assert_array_equal(arr, b) + return + # Use the fact that the array is originally an arange: + arr.flat[indexed_arr.ravel()] += 1000 + assert_array_equal(arr, b) + + def test_boolean(self): + a = np.array(5) + assert_equal(a[np.array(True)], 5) + a[np.array(True)] = 1 + assert_equal(a, 1) + # NOTE: This is different from normal broadcasting, as + # arr[boolean_array] works like in a multi index. Which means + # it is aligned to the left. This is probably correct for + # consistency with arr[boolean_array,] also no broadcasting + # is done at all + self._check_multi_index( + self.a, (np.zeros_like(self.a, dtype=bool),)) + self._check_multi_index( + self.a, (np.zeros_like(self.a, dtype=bool)[..., 0],)) + self._check_multi_index( + self.a, (np.zeros_like(self.a, dtype=bool)[None, ...],)) + + def test_multidim(self): + # Automatically test combinations with complex indexes on 2nd (or 1st) + # spot and the simple ones in one other spot. + with warnings.catch_warnings(): + # This is so that np.array(True) is not accepted in a full integer + # index, when running the file separately. + warnings.filterwarnings('error', '', DeprecationWarning) + warnings.filterwarnings('error', '', VisibleDeprecationWarning) + + def isskip(idx): + return isinstance(idx, str) and idx == "skip" + + for simple_pos in [0, 2, 3]: + tocheck = [self.fill_indices, self.complex_indices, + self.fill_indices, self.fill_indices] + tocheck[simple_pos] = self.simple_indices + for index in product(*tocheck): + index = tuple(i for i in index if not isskip(i)) + self._check_multi_index(self.a, index) + self._check_multi_index(self.b, index) + + # Check very simple item getting: + self._check_multi_index(self.a, (0, 0, 0, 0)) + self._check_multi_index(self.b, (0, 0, 0, 0)) + # Also check (simple cases of) too many indices: + assert_raises(IndexError, self.a.__getitem__, (0, 0, 0, 0, 0)) + assert_raises(IndexError, self.a.__setitem__, (0, 0, 0, 0, 0), 0) + assert_raises(IndexError, self.a.__getitem__, (0, 0, [1], 0, 0)) + assert_raises(IndexError, self.a.__setitem__, (0, 0, [1], 0, 0), 0) + + def test_1d(self): + a = np.arange(10) + for index in self.complex_indices: + self._check_single_index(a, index) + +class TestFloatNonIntegerArgument: + """ + These test that ``TypeError`` is raised when you try to use + non-integers as arguments to for indexing and slicing e.g. ``a[0.0:5]`` + and ``a[0.5]``, or other functions like ``array.reshape(1., -1)``. + + """ + def test_valid_indexing(self): + # These should raise no errors. + a = np.array([[[5]]]) + + a[np.array([0])] + a[[0, 0]] + a[:, [0, 0]] + a[:, 0,:] + a[:,:,:] + + def test_valid_slicing(self): + # These should raise no errors. + a = np.array([[[5]]]) + + a[::] + a[0:] + a[:2] + a[0:2] + a[::2] + a[1::2] + a[:2:2] + a[1:2:2] + + def test_non_integer_argument_errors(self): + a = np.array([[5]]) + + assert_raises(TypeError, np.reshape, a, (1., 1., -1)) + assert_raises(TypeError, np.reshape, a, (np.array(1.), -1)) + assert_raises(TypeError, np.take, a, [0], 1.) + assert_raises(TypeError, np.take, a, [0], np.float64(1.)) + + def test_non_integer_sequence_multiplication(self): + # NumPy scalar sequence multiply should not work with non-integers + def mult(a, b): + return a * b + + assert_raises(TypeError, mult, [1], np.float64(3)) + # following should be OK + mult([1], np.int_(3)) + + def test_reduce_axis_float_index(self): + d = np.zeros((3,3,3)) + assert_raises(TypeError, np.min, d, 0.5) + assert_raises(TypeError, np.min, d, (0.5, 1)) + assert_raises(TypeError, np.min, d, (1, 2.2)) + assert_raises(TypeError, np.min, d, (.2, 1.2)) + + +class TestBooleanIndexing: + # Using a boolean as integer argument/indexing is an error. + def test_bool_as_int_argument_errors(self): + a = np.array([[[1]]]) + + assert_raises(TypeError, np.reshape, a, (True, -1)) + assert_raises(TypeError, np.reshape, a, (np.bool(True), -1)) + # Note that operator.index(np.array(True)) does not work, a boolean + # array is thus also deprecated, but not with the same message: + assert_raises(TypeError, operator.index, np.array(True)) + assert_warns(DeprecationWarning, operator.index, np.True_) + assert_raises(TypeError, np.take, args=(a, [0], False)) + + def test_boolean_indexing_weirdness(self): + # Weird boolean indexing things + a = np.ones((2, 3, 4)) + assert a[False, True, ...].shape == (0, 2, 3, 4) + assert a[True, [0, 1], True, True, [1], [[2]]].shape == (1, 2) + assert_raises(IndexError, lambda: a[False, [0, 1], ...]) + + def test_boolean_indexing_fast_path(self): + # These used to either give the wrong error, or incorrectly give no + # error. + a = np.ones((3, 3)) + + # This used to incorrectly work (and give an array of shape (0,)) + idx1 = np.array([[False]*9]) + assert_raises_regex(IndexError, + "boolean index did not match indexed array along axis 0; " + "size of axis is 3 but size of corresponding boolean axis is 1", + lambda: a[idx1]) + + # This used to incorrectly give a ValueError: operands could not be broadcast together + idx2 = np.array([[False]*8 + [True]]) + assert_raises_regex(IndexError, + "boolean index did not match indexed array along axis 0; " + "size of axis is 3 but size of corresponding boolean axis is 1", + lambda: a[idx2]) + + # This is the same as it used to be. The above two should work like this. + idx3 = np.array([[False]*10]) + assert_raises_regex(IndexError, + "boolean index did not match indexed array along axis 0; " + "size of axis is 3 but size of corresponding boolean axis is 1", + lambda: a[idx3]) + + # This used to give ValueError: non-broadcastable operand + a = np.ones((1, 1, 2)) + idx = np.array([[[True], [False]]]) + assert_raises_regex(IndexError, + "boolean index did not match indexed array along axis 1; " + "size of axis is 1 but size of corresponding boolean axis is 2", + lambda: a[idx]) + + +class TestArrayToIndexDeprecation: + """Creating an index from array not 0-D is an error. + + """ + def test_array_to_index_error(self): + # so no exception is expected. The raising is effectively tested above. + a = np.array([[[1]]]) + + assert_raises(TypeError, operator.index, np.array([1])) + assert_raises(TypeError, np.reshape, a, (a, -1)) + assert_raises(TypeError, np.take, a, [0], a) + + +class TestNonIntegerArrayLike: + """Tests that array_likes only valid if can safely cast to integer. + + For instance, lists give IndexError when they cannot be safely cast to + an integer. + + """ + def test_basic(self): + a = np.arange(10) + + assert_raises(IndexError, a.__getitem__, [0.5, 1.5]) + assert_raises(IndexError, a.__getitem__, (['1', '2'],)) + + # The following is valid + a.__getitem__([]) + + +class TestMultipleEllipsisError: + """An index can only have a single ellipsis. + + """ + def test_basic(self): + a = np.arange(10) + assert_raises(IndexError, lambda: a[..., ...]) + assert_raises(IndexError, a.__getitem__, ((Ellipsis,) * 2,)) + assert_raises(IndexError, a.__getitem__, ((Ellipsis,) * 3,)) + + +class TestCApiAccess: + def test_getitem(self): + subscript = functools.partial(array_indexing, 0) + + # 0-d arrays don't work: + assert_raises(IndexError, subscript, np.ones(()), 0) + # Out of bound values: + assert_raises(IndexError, subscript, np.ones(10), 11) + assert_raises(IndexError, subscript, np.ones(10), -11) + assert_raises(IndexError, subscript, np.ones((10, 10)), 11) + assert_raises(IndexError, subscript, np.ones((10, 10)), -11) + + a = np.arange(10) + assert_array_equal(a[4], subscript(a, 4)) + a = a.reshape(5, 2) + assert_array_equal(a[-4], subscript(a, -4)) + + def test_setitem(self): + assign = functools.partial(array_indexing, 1) + + # Deletion is impossible: + assert_raises(ValueError, assign, np.ones(10), 0) + # 0-d arrays don't work: + assert_raises(IndexError, assign, np.ones(()), 0, 0) + # Out of bound values: + assert_raises(IndexError, assign, np.ones(10), 11, 0) + assert_raises(IndexError, assign, np.ones(10), -11, 0) + assert_raises(IndexError, assign, np.ones((10, 10)), 11, 0) + assert_raises(IndexError, assign, np.ones((10, 10)), -11, 0) + + a = np.arange(10) + assign(a, 4, 10) + assert_(a[4] == 10) + + a = a.reshape(5, 2) + assign(a, 4, 10) + assert_array_equal(a[-1], [10, 10]) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_item_selection.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_item_selection.py new file mode 100644 index 0000000000000000000000000000000000000000..5660ef583edb52824494efb4d444d10ad2be5b6a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_item_selection.py @@ -0,0 +1,165 @@ +import sys + +import pytest + +import numpy as np +from numpy.testing import ( + assert_, assert_raises, assert_array_equal, HAS_REFCOUNT + ) + + +class TestTake: + def test_simple(self): + a = [[1, 2], [3, 4]] + a_str = [[b'1', b'2'], [b'3', b'4']] + modes = ['raise', 'wrap', 'clip'] + indices = [-1, 4] + index_arrays = [np.empty(0, dtype=np.intp), + np.empty(tuple(), dtype=np.intp), + np.empty((1, 1), dtype=np.intp)] + real_indices = {'raise': {-1: 1, 4: IndexError}, + 'wrap': {-1: 1, 4: 0}, + 'clip': {-1: 0, 4: 1}} + # Currently all types but object, use the same function generation. + # So it should not be necessary to test all. However test also a non + # refcounted struct on top of object, which has a size that hits the + # default (non-specialized) path. + types = int, object, np.dtype([('', 'i2', 3)]) + for t in types: + # ta works, even if the array may be odd if buffer interface is used + ta = np.array(a if np.issubdtype(t, np.number) else a_str, dtype=t) + tresult = list(ta.T.copy()) + for index_array in index_arrays: + if index_array.size != 0: + tresult[0].shape = (2,) + index_array.shape + tresult[1].shape = (2,) + index_array.shape + for mode in modes: + for index in indices: + real_index = real_indices[mode][index] + if real_index is IndexError and index_array.size != 0: + index_array.put(0, index) + assert_raises(IndexError, ta.take, index_array, + mode=mode, axis=1) + elif index_array.size != 0: + index_array.put(0, index) + res = ta.take(index_array, mode=mode, axis=1) + assert_array_equal(res, tresult[real_index]) + else: + res = ta.take(index_array, mode=mode, axis=1) + assert_(res.shape == (2,) + index_array.shape) + + def test_refcounting(self): + objects = [object() for i in range(10)] + for mode in ('raise', 'clip', 'wrap'): + a = np.array(objects) + b = np.array([2, 2, 4, 5, 3, 5]) + a.take(b, out=a[:6], mode=mode) + del a + if HAS_REFCOUNT: + assert_(all(sys.getrefcount(o) == 3 for o in objects)) + # not contiguous, example: + a = np.array(objects * 2)[::2] + a.take(b, out=a[:6], mode=mode) + del a + if HAS_REFCOUNT: + assert_(all(sys.getrefcount(o) == 3 for o in objects)) + + def test_unicode_mode(self): + d = np.arange(10) + k = b'\xc3\xa4'.decode("UTF8") + assert_raises(ValueError, d.take, 5, mode=k) + + def test_empty_partition(self): + # In reference to github issue #6530 + a_original = np.array([0, 2, 4, 6, 8, 10]) + a = a_original.copy() + + # An empty partition should be a successful no-op + a.partition(np.array([], dtype=np.int16)) + + assert_array_equal(a, a_original) + + def test_empty_argpartition(self): + # In reference to github issue #6530 + a = np.array([0, 2, 4, 6, 8, 10]) + a = a.argpartition(np.array([], dtype=np.int16)) + + b = np.array([0, 1, 2, 3, 4, 5]) + assert_array_equal(a, b) + + +class TestPutMask: + @pytest.mark.parametrize("dtype", list(np.typecodes["All"]) + ["i,O"]) + def test_simple(self, dtype): + if dtype.lower() == "m": + dtype += "8[ns]" + + # putmask is weird and doesn't care about value length (even shorter) + vals = np.arange(1001).astype(dtype=dtype) + + mask = np.random.randint(2, size=1000).astype(bool) + # Use vals.dtype in case of flexible dtype (i.e. string) + arr = np.zeros(1000, dtype=vals.dtype) + zeros = arr.copy() + + np.putmask(arr, mask, vals) + assert_array_equal(arr[mask], vals[:len(mask)][mask]) + assert_array_equal(arr[~mask], zeros[~mask]) + + @pytest.mark.parametrize("dtype", list(np.typecodes["All"])[1:] + ["i,O"]) + @pytest.mark.parametrize("mode", ["raise", "wrap", "clip"]) + def test_empty(self, dtype, mode): + arr = np.zeros(1000, dtype=dtype) + arr_copy = arr.copy() + mask = np.random.randint(2, size=1000).astype(bool) + + # Allowing empty values like this is weird... + np.put(arr, mask, []) + assert_array_equal(arr, arr_copy) + + +class TestPut: + @pytest.mark.parametrize("dtype", list(np.typecodes["All"])[1:] + ["i,O"]) + @pytest.mark.parametrize("mode", ["raise", "wrap", "clip"]) + def test_simple(self, dtype, mode): + if dtype.lower() == "m": + dtype += "8[ns]" + + # put is weird and doesn't care about value length (even shorter) + vals = np.arange(1001).astype(dtype=dtype) + + # Use vals.dtype in case of flexible dtype (i.e. string) + arr = np.zeros(1000, dtype=vals.dtype) + zeros = arr.copy() + + if mode == "clip": + # Special because 0 and -1 value are "reserved" for clip test + indx = np.random.permutation(len(arr) - 2)[:-500] + 1 + + indx[-1] = 0 + indx[-2] = len(arr) - 1 + indx_put = indx.copy() + indx_put[-1] = -1389 + indx_put[-2] = 1321 + else: + # Avoid duplicates (for simplicity) and fill half only + indx = np.random.permutation(len(arr) - 3)[:-500] + indx_put = indx + if mode == "wrap": + indx_put = indx_put + len(arr) + + np.put(arr, indx_put, vals, mode=mode) + assert_array_equal(arr[indx], vals[:len(indx)]) + untouched = np.ones(len(arr), dtype=bool) + untouched[indx] = False + assert_array_equal(arr[untouched], zeros[:untouched.sum()]) + + @pytest.mark.parametrize("dtype", list(np.typecodes["All"])[1:] + ["i,O"]) + @pytest.mark.parametrize("mode", ["raise", "wrap", "clip"]) + def test_empty(self, dtype, mode): + arr = np.zeros(1000, dtype=dtype) + arr_copy = arr.copy() + + # Allowing empty values like this is weird... + np.put(arr, [1, 2, 3], []) + assert_array_equal(arr, arr_copy) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_limited_api.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_limited_api.py new file mode 100644 index 0000000000000000000000000000000000000000..9273264a867db32daad66496bfacfe7ae4d6748f --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_limited_api.py @@ -0,0 +1,80 @@ +import os +import shutil +import subprocess +import sys +import sysconfig +import pytest + +from numpy.testing import IS_WASM, IS_PYPY + +# This import is copied from random.tests.test_extending +try: + import cython + from Cython.Compiler.Version import version as cython_version +except ImportError: + cython = None +else: + from numpy._utils import _pep440 + + # Note: keep in sync with the one in pyproject.toml + required_version = "3.0.6" + if _pep440.parse(cython_version) < _pep440.Version(required_version): + # too old or wrong cython, skip the test + cython = None + +pytestmark = pytest.mark.skipif(cython is None, reason="requires cython") + + +@pytest.fixture(scope='module') +def install_temp(tmpdir_factory): + # Based in part on test_cython from random.tests.test_extending + if IS_WASM: + pytest.skip("No subprocess") + + srcdir = os.path.join(os.path.dirname(__file__), 'examples', 'limited_api') + build_dir = tmpdir_factory.mktemp("limited_api") / "build" + os.makedirs(build_dir, exist_ok=True) + try: + subprocess.check_call(["meson", "--version"]) + except FileNotFoundError: + pytest.skip("No usable 'meson' found") + if sys.platform == "win32": + subprocess.check_call(["meson", "setup", + "--werror", + "--buildtype=release", + "--vsenv", str(srcdir)], + cwd=build_dir, + ) + else: + subprocess.check_call(["meson", "setup", "--werror", str(srcdir)], + cwd=build_dir + ) + try: + subprocess.check_call( + ["meson", "compile", "-vv"], cwd=build_dir) + except subprocess.CalledProcessError as p: + print(f"{p.stdout=}") + print(f"{p.stderr=}") + raise + + sys.path.append(str(build_dir)) + + + +@pytest.mark.skipif(IS_WASM, reason="Can't start subprocess") +@pytest.mark.xfail( + sysconfig.get_config_var("Py_DEBUG"), + reason=( + "Py_LIMITED_API is incompatible with Py_DEBUG, Py_TRACE_REFS, " + "and Py_REF_DEBUG" + ), +) +@pytest.mark.skipif(IS_PYPY, reason="no support for limited API in PyPy") +def test_limited_api(install_temp): + """Test building a third-party C extension with the limited API + and building a cython extension with the limited API + """ + + import limited_api1 # Earliest (3.6) + import limited_api_latest # Latest version (current Python) + import limited_api2 # cython diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_longdouble.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_longdouble.py new file mode 100644 index 0000000000000000000000000000000000000000..a7ad5c9e57916976c395a083171236f70ce9d338 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_longdouble.py @@ -0,0 +1,395 @@ +import warnings +import platform +import pytest + +import numpy as np +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_warns, assert_array_equal, + temppath, IS_MUSL + ) +from numpy._core.tests._locales import CommaDecimalPointLocale + + +LD_INFO = np.finfo(np.longdouble) +longdouble_longer_than_double = (LD_INFO.eps < np.finfo(np.double).eps) + + +_o = 1 + LD_INFO.eps +string_to_longdouble_inaccurate = (_o != np.longdouble(str(_o))) +del _o + + +def test_scalar_extraction(): + """Confirm that extracting a value doesn't convert to python float""" + o = 1 + LD_INFO.eps + a = np.array([o, o, o]) + assert_equal(a[1], o) + + +# Conversions string -> long double + +# 0.1 not exactly representable in base 2 floating point. +repr_precision = len(repr(np.longdouble(0.1))) +# +2 from macro block starting around line 842 in scalartypes.c.src. + + +@pytest.mark.skipif(IS_MUSL, + reason="test flaky on musllinux") +@pytest.mark.skipif(LD_INFO.precision + 2 >= repr_precision, + reason="repr precision not enough to show eps") +def test_str_roundtrip(): + # We will only see eps in repr if within printing precision. + o = 1 + LD_INFO.eps + assert_equal(np.longdouble(str(o)), o, "str was %s" % str(o)) + + +@pytest.mark.skipif(string_to_longdouble_inaccurate, reason="Need strtold_l") +def test_str_roundtrip_bytes(): + o = 1 + LD_INFO.eps + assert_equal(np.longdouble(str(o).encode("ascii")), o) + + +@pytest.mark.skipif(string_to_longdouble_inaccurate, reason="Need strtold_l") +@pytest.mark.parametrize("strtype", (np.str_, np.bytes_, str, bytes)) +def test_array_and_stringlike_roundtrip(strtype): + """ + Test that string representations of long-double roundtrip both + for array casting and scalar coercion, see also gh-15608. + """ + o = 1 + LD_INFO.eps + + if strtype in (np.bytes_, bytes): + o_str = strtype(str(o).encode("ascii")) + else: + o_str = strtype(str(o)) + + # Test that `o` is correctly coerced from the string-like + assert o == np.longdouble(o_str) + + # Test that arrays also roundtrip correctly: + o_strarr = np.asarray([o] * 3, dtype=strtype) + assert (o == o_strarr.astype(np.longdouble)).all() + + # And array coercion and casting to string give the same as scalar repr: + assert (o_strarr == o_str).all() + assert (np.asarray([o] * 3).astype(strtype) == o_str).all() + + +def test_bogus_string(): + assert_raises(ValueError, np.longdouble, "spam") + assert_raises(ValueError, np.longdouble, "1.0 flub") + + +@pytest.mark.skipif(string_to_longdouble_inaccurate, reason="Need strtold_l") +def test_fromstring(): + o = 1 + LD_INFO.eps + s = (" " + str(o))*5 + a = np.array([o]*5) + assert_equal(np.fromstring(s, sep=" ", dtype=np.longdouble), a, + err_msg="reading '%s'" % s) + + +def test_fromstring_complex(): + for ctype in ["complex", "cdouble"]: + # Check spacing between separator + assert_equal(np.fromstring("1, 2 , 3 ,4", sep=",", dtype=ctype), + np.array([1., 2., 3., 4.])) + # Real component not specified + assert_equal(np.fromstring("1j, -2j, 3j, 4e1j", sep=",", dtype=ctype), + np.array([1.j, -2.j, 3.j, 40.j])) + # Both components specified + assert_equal(np.fromstring("1+1j,2-2j, -3+3j, -4e1+4j", sep=",", dtype=ctype), + np.array([1. + 1.j, 2. - 2.j, - 3. + 3.j, - 40. + 4j])) + # Spaces at wrong places + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1+2 j,3", dtype=ctype, sep=","), + np.array([1.])) + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1+ 2j,3", dtype=ctype, sep=","), + np.array([1.])) + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1 +2j,3", dtype=ctype, sep=","), + np.array([1.])) + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1+j", dtype=ctype, sep=","), + np.array([1.])) + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1+", dtype=ctype, sep=","), + np.array([1.])) + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1j+1", dtype=ctype, sep=","), + np.array([1j])) + + +def test_fromstring_bogus(): + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1. 2. 3. flop 4.", dtype=float, sep=" "), + np.array([1., 2., 3.])) + + +def test_fromstring_empty(): + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("xxxxx", sep="x"), + np.array([])) + + +def test_fromstring_missing(): + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1xx3x4x5x6", sep="x"), + np.array([1])) + + +class TestFileBased: + + ldbl = 1 + LD_INFO.eps + tgt = np.array([ldbl]*5) + out = ''.join([str(t) + '\n' for t in tgt]) + + def test_fromfile_bogus(self): + with temppath() as path: + with open(path, 'w') as f: + f.write("1. 2. 3. flop 4.\n") + + with assert_warns(DeprecationWarning): + res = np.fromfile(path, dtype=float, sep=" ") + assert_equal(res, np.array([1., 2., 3.])) + + def test_fromfile_complex(self): + for ctype in ["complex", "cdouble"]: + # Check spacing between separator and only real component specified + with temppath() as path: + with open(path, 'w') as f: + f.write("1, 2 , 3 ,4\n") + + res = np.fromfile(path, dtype=ctype, sep=",") + assert_equal(res, np.array([1., 2., 3., 4.])) + + # Real component not specified + with temppath() as path: + with open(path, 'w') as f: + f.write("1j, -2j, 3j, 4e1j\n") + + res = np.fromfile(path, dtype=ctype, sep=",") + assert_equal(res, np.array([1.j, -2.j, 3.j, 40.j])) + + # Both components specified + with temppath() as path: + with open(path, 'w') as f: + f.write("1+1j,2-2j, -3+3j, -4e1+4j\n") + + res = np.fromfile(path, dtype=ctype, sep=",") + assert_equal(res, np.array([1. + 1.j, 2. - 2.j, - 3. + 3.j, - 40. + 4j])) + + # Spaces at wrong places + with temppath() as path: + with open(path, 'w') as f: + f.write("1+2 j,3\n") + + with assert_warns(DeprecationWarning): + res = np.fromfile(path, dtype=ctype, sep=",") + assert_equal(res, np.array([1.])) + + # Spaces at wrong places + with temppath() as path: + with open(path, 'w') as f: + f.write("1+ 2j,3\n") + + with assert_warns(DeprecationWarning): + res = np.fromfile(path, dtype=ctype, sep=",") + assert_equal(res, np.array([1.])) + + # Spaces at wrong places + with temppath() as path: + with open(path, 'w') as f: + f.write("1 +2j,3\n") + + with assert_warns(DeprecationWarning): + res = np.fromfile(path, dtype=ctype, sep=",") + assert_equal(res, np.array([1.])) + + # Spaces at wrong places + with temppath() as path: + with open(path, 'w') as f: + f.write("1+j\n") + + with assert_warns(DeprecationWarning): + res = np.fromfile(path, dtype=ctype, sep=",") + assert_equal(res, np.array([1.])) + + # Spaces at wrong places + with temppath() as path: + with open(path, 'w') as f: + f.write("1+\n") + + with assert_warns(DeprecationWarning): + res = np.fromfile(path, dtype=ctype, sep=",") + assert_equal(res, np.array([1.])) + + # Spaces at wrong places + with temppath() as path: + with open(path, 'w') as f: + f.write("1j+1\n") + + with assert_warns(DeprecationWarning): + res = np.fromfile(path, dtype=ctype, sep=",") + assert_equal(res, np.array([1.j])) + + + + @pytest.mark.skipif(string_to_longdouble_inaccurate, + reason="Need strtold_l") + def test_fromfile(self): + with temppath() as path: + with open(path, 'w') as f: + f.write(self.out) + res = np.fromfile(path, dtype=np.longdouble, sep="\n") + assert_equal(res, self.tgt) + + @pytest.mark.skipif(string_to_longdouble_inaccurate, + reason="Need strtold_l") + def test_genfromtxt(self): + with temppath() as path: + with open(path, 'w') as f: + f.write(self.out) + res = np.genfromtxt(path, dtype=np.longdouble) + assert_equal(res, self.tgt) + + @pytest.mark.skipif(string_to_longdouble_inaccurate, + reason="Need strtold_l") + def test_loadtxt(self): + with temppath() as path: + with open(path, 'w') as f: + f.write(self.out) + res = np.loadtxt(path, dtype=np.longdouble) + assert_equal(res, self.tgt) + + @pytest.mark.skipif(string_to_longdouble_inaccurate, + reason="Need strtold_l") + def test_tofile_roundtrip(self): + with temppath() as path: + self.tgt.tofile(path, sep=" ") + res = np.fromfile(path, dtype=np.longdouble, sep=" ") + assert_equal(res, self.tgt) + + +# Conversions long double -> string + + +def test_str_exact(): + o = 1 + LD_INFO.eps + assert_(str(o) != '1') + + +@pytest.mark.skipif(longdouble_longer_than_double, reason="BUG #2376") +@pytest.mark.skipif(string_to_longdouble_inaccurate, + reason="Need strtold_l") +def test_format(): + o = 1 + LD_INFO.eps + assert_("{0:.40g}".format(o) != '1') + + +@pytest.mark.skipif(longdouble_longer_than_double, reason="BUG #2376") +@pytest.mark.skipif(string_to_longdouble_inaccurate, + reason="Need strtold_l") +def test_percent(): + o = 1 + LD_INFO.eps + assert_("%.40g" % o != '1') + + +@pytest.mark.skipif(longdouble_longer_than_double, + reason="array repr problem") +@pytest.mark.skipif(string_to_longdouble_inaccurate, + reason="Need strtold_l") +def test_array_repr(): + o = 1 + LD_INFO.eps + a = np.array([o]) + b = np.array([1], dtype=np.longdouble) + if not np.all(a != b): + raise ValueError("precision loss creating arrays") + assert_(repr(a) != repr(b)) + +# +# Locale tests: scalar types formatting should be independent of the locale +# + +class TestCommaDecimalPointLocale(CommaDecimalPointLocale): + + def test_str_roundtrip_foreign(self): + o = 1.5 + assert_equal(o, np.longdouble(str(o))) + + def test_fromstring_foreign_repr(self): + f = 1.234 + a = np.fromstring(repr(f), dtype=float, sep=" ") + assert_equal(a[0], f) + + def test_fromstring_best_effort_float(self): + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1,234", dtype=float, sep=" "), + np.array([1.])) + + def test_fromstring_best_effort(self): + with assert_warns(DeprecationWarning): + assert_equal(np.fromstring("1,234", dtype=np.longdouble, sep=" "), + np.array([1.])) + + def test_fromstring_foreign(self): + s = "1.234" + a = np.fromstring(s, dtype=np.longdouble, sep=" ") + assert_equal(a[0], np.longdouble(s)) + + def test_fromstring_foreign_sep(self): + a = np.array([1, 2, 3, 4]) + b = np.fromstring("1,2,3,4,", dtype=np.longdouble, sep=",") + assert_array_equal(a, b) + + def test_fromstring_foreign_value(self): + with assert_warns(DeprecationWarning): + b = np.fromstring("1,234", dtype=np.longdouble, sep=" ") + assert_array_equal(b[0], 1) + + +@pytest.mark.parametrize("int_val", [ + # cases discussed in gh-10723 + # and gh-9968 + 2 ** 1024, 0]) +def test_longdouble_from_int(int_val): + # for issue gh-9968 + str_val = str(int_val) + # we'll expect a RuntimeWarning on platforms + # with np.longdouble equivalent to np.double + # for large integer input + with warnings.catch_warnings(record=True) as w: + warnings.filterwarnings('always', '', RuntimeWarning) + # can be inf==inf on some platforms + assert np.longdouble(int_val) == np.longdouble(str_val) + # we can't directly compare the int and + # max longdouble value on all platforms + if np.allclose(np.finfo(np.longdouble).max, + np.finfo(np.double).max) and w: + assert w[0].category is RuntimeWarning + +@pytest.mark.parametrize("bool_val", [ + True, False]) +def test_longdouble_from_bool(bool_val): + assert np.longdouble(bool_val) == np.longdouble(int(bool_val)) + + +@pytest.mark.skipif( + not (IS_MUSL and platform.machine() == "x86_64"), + reason="only need to run on musllinux_x86_64" +) +def test_musllinux_x86_64_signature(): + # this test may fail if you're emulating musllinux_x86_64 on a different + # architecture, but should pass natively. + known_sigs = [b'\xcd\xcc\xcc\xcc\xcc\xcc\xcc\xcc\xfb\xbf'] + sig = (np.longdouble(-1.0) / np.longdouble(10.0)) + sig = sig.view(sig.dtype.newbyteorder('<')).tobytes()[:10] + assert sig in known_sigs + + +def test_eps_positive(): + # np.finfo('g').eps should be positive on all platforms. If this isn't true + # then something may have gone wrong with the MachArLike, e.g. if + # np._core.getlimits._discovered_machar didn't work properly + assert np.finfo(np.longdouble).eps > 0. diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_machar.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_machar.py new file mode 100644 index 0000000000000000000000000000000000000000..c7f677075dcac04cd1d2202bbcac5076ceabb703 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_machar.py @@ -0,0 +1,30 @@ +""" +Test machar. Given recent changes to hardcode type data, we might want to get +rid of both MachAr and this test at some point. + +""" +from numpy._core._machar import MachAr +import numpy._core.numerictypes as ntypes +from numpy import errstate, array + + +class TestMachAr: + def _run_machar_highprec(self): + # Instantiate MachAr instance with high enough precision to cause + # underflow + try: + hiprec = ntypes.float96 + MachAr(lambda v: array(v, hiprec)) + except AttributeError: + # Fixme, this needs to raise a 'skip' exception. + "Skipping test: no ntypes.float96 available on this platform." + + def test_underlow(self): + # Regression test for #759: + # instantiating MachAr for dtype = np.float96 raises spurious warning. + with errstate(all='raise'): + try: + self._run_machar_highprec() + except FloatingPointError as e: + msg = "Caught %s exception, should not have been raised." % e + raise AssertionError(msg) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_mem_overlap.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_mem_overlap.py new file mode 100644 index 0000000000000000000000000000000000000000..4ea70c044d518b225604a846002be53e1a23f879 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_mem_overlap.py @@ -0,0 +1,933 @@ +import itertools +import pytest + +import numpy as np +from numpy._core._multiarray_tests import solve_diophantine, internal_overlap +from numpy._core import _umath_tests +from numpy.lib.stride_tricks import as_strided +from numpy.testing import ( + assert_, assert_raises, assert_equal, assert_array_equal + ) + + +ndims = 2 +size = 10 +shape = tuple([size] * ndims) + +MAY_SHARE_BOUNDS = 0 +MAY_SHARE_EXACT = -1 + + +def _indices_for_nelems(nelems): + """Returns slices of length nelems, from start onwards, in direction sign.""" + + if nelems == 0: + return [size // 2] # int index + + res = [] + for step in (1, 2): + for sign in (-1, 1): + start = size // 2 - nelems * step * sign // 2 + stop = start + nelems * step * sign + res.append(slice(start, stop, step * sign)) + + return res + + +def _indices_for_axis(): + """Returns (src, dst) pairs of indices.""" + + res = [] + for nelems in (0, 2, 3): + ind = _indices_for_nelems(nelems) + res.extend(itertools.product(ind, ind)) # all assignments of size "nelems" + + return res + + +def _indices(ndims): + """Returns ((axis0_src, axis0_dst), (axis1_src, axis1_dst), ... ) index pairs.""" + + ind = _indices_for_axis() + return itertools.product(ind, repeat=ndims) + + +def _check_assignment(srcidx, dstidx): + """Check assignment arr[dstidx] = arr[srcidx] works.""" + + arr = np.arange(np.prod(shape)).reshape(shape) + + cpy = arr.copy() + + cpy[dstidx] = arr[srcidx] + arr[dstidx] = arr[srcidx] + + assert_(np.all(arr == cpy), + 'assigning arr[%s] = arr[%s]' % (dstidx, srcidx)) + + +def test_overlapping_assignments(): + # Test automatically generated assignments which overlap in memory. + + inds = _indices(ndims) + + for ind in inds: + srcidx = tuple([a[0] for a in ind]) + dstidx = tuple([a[1] for a in ind]) + + _check_assignment(srcidx, dstidx) + + +@pytest.mark.slow +def test_diophantine_fuzz(): + # Fuzz test the diophantine solver + rng = np.random.RandomState(1234) + + max_int = np.iinfo(np.intp).max + + for ndim in range(10): + feasible_count = 0 + infeasible_count = 0 + + min_count = 500//(ndim + 1) + + while min(feasible_count, infeasible_count) < min_count: + # Ensure big and small integer problems + A_max = 1 + rng.randint(0, 11, dtype=np.intp)**6 + U_max = rng.randint(0, 11, dtype=np.intp)**6 + + A_max = min(max_int, A_max) + U_max = min(max_int-1, U_max) + + A = tuple(int(rng.randint(1, A_max+1, dtype=np.intp)) + for j in range(ndim)) + U = tuple(int(rng.randint(0, U_max+2, dtype=np.intp)) + for j in range(ndim)) + + b_ub = min(max_int-2, sum(a*ub for a, ub in zip(A, U))) + b = int(rng.randint(-1, b_ub+2, dtype=np.intp)) + + if ndim == 0 and feasible_count < min_count: + b = 0 + + X = solve_diophantine(A, U, b) + + if X is None: + # Check the simplified decision problem agrees + X_simplified = solve_diophantine(A, U, b, simplify=1) + assert_(X_simplified is None, (A, U, b, X_simplified)) + + # Check no solution exists (provided the problem is + # small enough so that brute force checking doesn't + # take too long) + ranges = tuple(range(0, a*ub+1, a) for a, ub in zip(A, U)) + + size = 1 + for r in ranges: + size *= len(r) + if size < 100000: + assert_(not any(sum(w) == b for w in itertools.product(*ranges))) + infeasible_count += 1 + else: + # Check the simplified decision problem agrees + X_simplified = solve_diophantine(A, U, b, simplify=1) + assert_(X_simplified is not None, (A, U, b, X_simplified)) + + # Check validity + assert_(sum(a*x for a, x in zip(A, X)) == b) + assert_(all(0 <= x <= ub for x, ub in zip(X, U))) + feasible_count += 1 + + +def test_diophantine_overflow(): + # Smoke test integer overflow detection + max_intp = np.iinfo(np.intp).max + max_int64 = np.iinfo(np.int64).max + + if max_int64 <= max_intp: + # Check that the algorithm works internally in 128-bit; + # solving this problem requires large intermediate numbers + A = (max_int64//2, max_int64//2 - 10) + U = (max_int64//2, max_int64//2 - 10) + b = 2*(max_int64//2) - 10 + + assert_equal(solve_diophantine(A, U, b), (1, 1)) + + +def check_may_share_memory_exact(a, b): + got = np.may_share_memory(a, b, max_work=MAY_SHARE_EXACT) + + assert_equal(np.may_share_memory(a, b), + np.may_share_memory(a, b, max_work=MAY_SHARE_BOUNDS)) + + a.fill(0) + b.fill(0) + a.fill(1) + exact = b.any() + + err_msg = "" + if got != exact: + err_msg = " " + "\n ".join([ + "base_a - base_b = %r" % (a.__array_interface__['data'][0] - b.__array_interface__['data'][0],), + "shape_a = %r" % (a.shape,), + "shape_b = %r" % (b.shape,), + "strides_a = %r" % (a.strides,), + "strides_b = %r" % (b.strides,), + "size_a = %r" % (a.size,), + "size_b = %r" % (b.size,) + ]) + + assert_equal(got, exact, err_msg=err_msg) + + +def test_may_share_memory_manual(): + # Manual test cases for may_share_memory + + # Base arrays + xs0 = [ + np.zeros([13, 21, 23, 22], dtype=np.int8), + np.zeros([13, 21, 23*2, 22], dtype=np.int8)[:,:,::2,:] + ] + + # Generate all negative stride combinations + xs = [] + for x in xs0: + for ss in itertools.product(*(([slice(None), slice(None, None, -1)],)*4)): + xp = x[ss] + xs.append(xp) + + for x in xs: + # The default is a simple extent check + assert_(np.may_share_memory(x[:,0,:], x[:,1,:])) + assert_(np.may_share_memory(x[:,0,:], x[:,1,:], max_work=None)) + + # Exact checks + check_may_share_memory_exact(x[:,0,:], x[:,1,:]) + check_may_share_memory_exact(x[:,::7], x[:,3::3]) + + try: + xp = x.ravel() + if xp.flags.owndata: + continue + xp = xp.view(np.int16) + except ValueError: + continue + + # 0-size arrays cannot overlap + check_may_share_memory_exact(x.ravel()[6:6], + xp.reshape(13, 21, 23, 11)[:,::7]) + + # Test itemsize is dealt with + check_may_share_memory_exact(x[:,::7], + xp.reshape(13, 21, 23, 11)) + check_may_share_memory_exact(x[:,::7], + xp.reshape(13, 21, 23, 11)[:,3::3]) + check_may_share_memory_exact(x.ravel()[6:7], + xp.reshape(13, 21, 23, 11)[:,::7]) + + # Check unit size + x = np.zeros([1], dtype=np.int8) + check_may_share_memory_exact(x, x) + check_may_share_memory_exact(x, x.copy()) + + +def iter_random_view_pairs(x, same_steps=True, equal_size=False): + rng = np.random.RandomState(1234) + + if equal_size and same_steps: + raise ValueError() + + def random_slice(n, step): + start = rng.randint(0, n+1, dtype=np.intp) + stop = rng.randint(start, n+1, dtype=np.intp) + if rng.randint(0, 2, dtype=np.intp) == 0: + stop, start = start, stop + step *= -1 + return slice(start, stop, step) + + def random_slice_fixed_size(n, step, size): + start = rng.randint(0, n+1 - size*step) + stop = start + (size-1)*step + 1 + if rng.randint(0, 2) == 0: + stop, start = start-1, stop-1 + if stop < 0: + stop = None + step *= -1 + return slice(start, stop, step) + + # First a few regular views + yield x, x + for j in range(1, 7, 3): + yield x[j:], x[:-j] + yield x[...,j:], x[...,:-j] + + # An array with zero stride internal overlap + strides = list(x.strides) + strides[0] = 0 + xp = as_strided(x, shape=x.shape, strides=strides) + yield x, xp + yield xp, xp + + # An array with non-zero stride internal overlap + strides = list(x.strides) + if strides[0] > 1: + strides[0] = 1 + xp = as_strided(x, shape=x.shape, strides=strides) + yield x, xp + yield xp, xp + + # Then discontiguous views + while True: + steps = tuple(rng.randint(1, 11, dtype=np.intp) + if rng.randint(0, 5, dtype=np.intp) == 0 else 1 + for j in range(x.ndim)) + s1 = tuple(random_slice(p, s) for p, s in zip(x.shape, steps)) + + t1 = np.arange(x.ndim) + rng.shuffle(t1) + + if equal_size: + t2 = t1 + else: + t2 = np.arange(x.ndim) + rng.shuffle(t2) + + a = x[s1] + + if equal_size: + if a.size == 0: + continue + + steps2 = tuple(rng.randint(1, max(2, p//(1+pa))) + if rng.randint(0, 5) == 0 else 1 + for p, s, pa in zip(x.shape, s1, a.shape)) + s2 = tuple(random_slice_fixed_size(p, s, pa) + for p, s, pa in zip(x.shape, steps2, a.shape)) + elif same_steps: + steps2 = steps + else: + steps2 = tuple(rng.randint(1, 11, dtype=np.intp) + if rng.randint(0, 5, dtype=np.intp) == 0 else 1 + for j in range(x.ndim)) + + if not equal_size: + s2 = tuple(random_slice(p, s) for p, s in zip(x.shape, steps2)) + + a = a.transpose(t1) + b = x[s2].transpose(t2) + + yield a, b + + +def check_may_share_memory_easy_fuzz(get_max_work, same_steps, min_count): + # Check that overlap problems with common strides are solved with + # little work. + x = np.zeros([17,34,71,97], dtype=np.int16) + + feasible = 0 + infeasible = 0 + + pair_iter = iter_random_view_pairs(x, same_steps) + + while min(feasible, infeasible) < min_count: + a, b = next(pair_iter) + + bounds_overlap = np.may_share_memory(a, b) + may_share_answer = np.may_share_memory(a, b) + easy_answer = np.may_share_memory(a, b, max_work=get_max_work(a, b)) + exact_answer = np.may_share_memory(a, b, max_work=MAY_SHARE_EXACT) + + if easy_answer != exact_answer: + # assert_equal is slow... + assert_equal(easy_answer, exact_answer) + + if may_share_answer != bounds_overlap: + assert_equal(may_share_answer, bounds_overlap) + + if bounds_overlap: + if exact_answer: + feasible += 1 + else: + infeasible += 1 + + +@pytest.mark.slow +def test_may_share_memory_easy_fuzz(): + # Check that overlap problems with common strides are always + # solved with little work. + + check_may_share_memory_easy_fuzz(get_max_work=lambda a, b: 1, + same_steps=True, + min_count=2000) + + +@pytest.mark.slow +def test_may_share_memory_harder_fuzz(): + # Overlap problems with not necessarily common strides take more + # work. + # + # The work bound below can't be reduced much. Harder problems can + # also exist but not be detected here, as the set of problems + # comes from RNG. + + check_may_share_memory_easy_fuzz(get_max_work=lambda a, b: max(a.size, b.size)//2, + same_steps=False, + min_count=2000) + + +def test_shares_memory_api(): + x = np.zeros([4, 5, 6], dtype=np.int8) + + assert_equal(np.shares_memory(x, x), True) + assert_equal(np.shares_memory(x, x.copy()), False) + + a = x[:,::2,::3] + b = x[:,::3,::2] + assert_equal(np.shares_memory(a, b), True) + assert_equal(np.shares_memory(a, b, max_work=None), True) + assert_raises( + np.exceptions.TooHardError, np.shares_memory, a, b, max_work=1 + ) + + +def test_may_share_memory_bad_max_work(): + x = np.zeros([1]) + assert_raises(OverflowError, np.may_share_memory, x, x, max_work=10**100) + assert_raises(OverflowError, np.shares_memory, x, x, max_work=10**100) + + +def test_internal_overlap_diophantine(): + def check(A, U, exists=None): + X = solve_diophantine(A, U, 0, require_ub_nontrivial=1) + + if exists is None: + exists = (X is not None) + + if X is not None: + assert_(sum(a*x for a, x in zip(A, X)) == sum(a*u//2 for a, u in zip(A, U))) + assert_(all(0 <= x <= u for x, u in zip(X, U))) + assert_(any(x != u//2 for x, u in zip(X, U))) + + if exists: + assert_(X is not None, repr(X)) + else: + assert_(X is None, repr(X)) + + # Smoke tests + check((3, 2), (2*2, 3*2), exists=True) + check((3*2, 2), (15*2, (3-1)*2), exists=False) + + +def test_internal_overlap_slices(): + # Slicing an array never generates internal overlap + + x = np.zeros([17,34,71,97], dtype=np.int16) + + rng = np.random.RandomState(1234) + + def random_slice(n, step): + start = rng.randint(0, n+1, dtype=np.intp) + stop = rng.randint(start, n+1, dtype=np.intp) + if rng.randint(0, 2, dtype=np.intp) == 0: + stop, start = start, stop + step *= -1 + return slice(start, stop, step) + + cases = 0 + min_count = 5000 + + while cases < min_count: + steps = tuple(rng.randint(1, 11, dtype=np.intp) + if rng.randint(0, 5, dtype=np.intp) == 0 else 1 + for j in range(x.ndim)) + t1 = np.arange(x.ndim) + rng.shuffle(t1) + s1 = tuple(random_slice(p, s) for p, s in zip(x.shape, steps)) + a = x[s1].transpose(t1) + + assert_(not internal_overlap(a)) + cases += 1 + + +def check_internal_overlap(a, manual_expected=None): + got = internal_overlap(a) + + # Brute-force check + m = set() + ranges = tuple(range(n) for n in a.shape) + for v in itertools.product(*ranges): + offset = sum(s*w for s, w in zip(a.strides, v)) + if offset in m: + expected = True + break + else: + m.add(offset) + else: + expected = False + + # Compare + if got != expected: + assert_equal(got, expected, err_msg=repr((a.strides, a.shape))) + if manual_expected is not None and expected != manual_expected: + assert_equal(expected, manual_expected) + return got + + +def test_internal_overlap_manual(): + # Stride tricks can construct arrays with internal overlap + + # We don't care about memory bounds, the array is not + # read/write accessed + x = np.arange(1).astype(np.int8) + + # Check low-dimensional special cases + + check_internal_overlap(x, False) # 1-dim + check_internal_overlap(x.reshape([]), False) # 0-dim + + a = as_strided(x, strides=(3, 4), shape=(4, 4)) + check_internal_overlap(a, False) + + a = as_strided(x, strides=(3, 4), shape=(5, 4)) + check_internal_overlap(a, True) + + a = as_strided(x, strides=(0,), shape=(0,)) + check_internal_overlap(a, False) + + a = as_strided(x, strides=(0,), shape=(1,)) + check_internal_overlap(a, False) + + a = as_strided(x, strides=(0,), shape=(2,)) + check_internal_overlap(a, True) + + a = as_strided(x, strides=(0, -9993), shape=(87, 22)) + check_internal_overlap(a, True) + + a = as_strided(x, strides=(0, -9993), shape=(1, 22)) + check_internal_overlap(a, False) + + a = as_strided(x, strides=(0, -9993), shape=(0, 22)) + check_internal_overlap(a, False) + + +def test_internal_overlap_fuzz(): + # Fuzz check; the brute-force check is fairly slow + + x = np.arange(1).astype(np.int8) + + overlap = 0 + no_overlap = 0 + min_count = 100 + + rng = np.random.RandomState(1234) + + while min(overlap, no_overlap) < min_count: + ndim = rng.randint(1, 4, dtype=np.intp) + + strides = tuple(rng.randint(-1000, 1000, dtype=np.intp) + for j in range(ndim)) + shape = tuple(rng.randint(1, 30, dtype=np.intp) + for j in range(ndim)) + + a = as_strided(x, strides=strides, shape=shape) + result = check_internal_overlap(a) + + if result: + overlap += 1 + else: + no_overlap += 1 + + +def test_non_ndarray_inputs(): + # Regression check for gh-5604 + + class MyArray: + def __init__(self, data): + self.data = data + + @property + def __array_interface__(self): + return self.data.__array_interface__ + + class MyArray2: + def __init__(self, data): + self.data = data + + def __array__(self, dtype=None, copy=None): + return self.data + + for cls in [MyArray, MyArray2]: + x = np.arange(5) + + assert_(np.may_share_memory(cls(x[::2]), x[1::2])) + assert_(not np.shares_memory(cls(x[::2]), x[1::2])) + + assert_(np.shares_memory(cls(x[1::3]), x[::2])) + assert_(np.may_share_memory(cls(x[1::3]), x[::2])) + + +def view_element_first_byte(x): + """Construct an array viewing the first byte of each element of `x`""" + from numpy.lib._stride_tricks_impl import DummyArray + interface = dict(x.__array_interface__) + interface['typestr'] = '|b1' + interface['descr'] = [('', '|b1')] + return np.asarray(DummyArray(interface, x)) + + +def assert_copy_equivalent(operation, args, out, **kwargs): + """ + Check that operation(*args, out=out) produces results + equivalent to out[...] = operation(*args, out=out.copy()) + """ + + kwargs['out'] = out + kwargs2 = dict(kwargs) + kwargs2['out'] = out.copy() + + out_orig = out.copy() + out[...] = operation(*args, **kwargs2) + expected = out.copy() + out[...] = out_orig + + got = operation(*args, **kwargs).copy() + + if (got != expected).any(): + assert_equal(got, expected) + + +class TestUFunc: + """ + Test ufunc call memory overlap handling + """ + + def check_unary_fuzz(self, operation, get_out_axis_size, dtype=np.int16, + count=5000): + shapes = [7, 13, 8, 21, 29, 32] + + rng = np.random.RandomState(1234) + + for ndim in range(1, 6): + x = rng.randint(0, 2**16, size=shapes[:ndim]).astype(dtype) + + it = iter_random_view_pairs(x, same_steps=False, equal_size=True) + + min_count = count // (ndim + 1)**2 + + overlapping = 0 + while overlapping < min_count: + a, b = next(it) + + a_orig = a.copy() + b_orig = b.copy() + + if get_out_axis_size is None: + assert_copy_equivalent(operation, [a], out=b) + + if np.shares_memory(a, b): + overlapping += 1 + else: + for axis in itertools.chain(range(ndim), [None]): + a[...] = a_orig + b[...] = b_orig + + # Determine size for reduction axis (None if scalar) + outsize, scalarize = get_out_axis_size(a, b, axis) + if outsize == 'skip': + continue + + # Slice b to get an output array of the correct size + sl = [slice(None)] * ndim + if axis is None: + if outsize is None: + sl = [slice(0, 1)] + [0]*(ndim - 1) + else: + sl = [slice(0, outsize)] + [0]*(ndim - 1) + else: + if outsize is None: + k = b.shape[axis]//2 + if ndim == 1: + sl[axis] = slice(k, k + 1) + else: + sl[axis] = k + else: + assert b.shape[axis] >= outsize + sl[axis] = slice(0, outsize) + b_out = b[tuple(sl)] + + if scalarize: + b_out = b_out.reshape([]) + + if np.shares_memory(a, b_out): + overlapping += 1 + + # Check result + assert_copy_equivalent(operation, [a], out=b_out, axis=axis) + + @pytest.mark.slow + def test_unary_ufunc_call_fuzz(self): + self.check_unary_fuzz(np.invert, None, np.int16) + + @pytest.mark.slow + def test_unary_ufunc_call_complex_fuzz(self): + # Complex typically has a smaller alignment than itemsize + self.check_unary_fuzz(np.negative, None, np.complex128, count=500) + + def test_binary_ufunc_accumulate_fuzz(self): + def get_out_axis_size(a, b, axis): + if axis is None: + if a.ndim == 1: + return a.size, False + else: + return 'skip', False # accumulate doesn't support this + else: + return a.shape[axis], False + + self.check_unary_fuzz(np.add.accumulate, get_out_axis_size, + dtype=np.int16, count=500) + + def test_binary_ufunc_reduce_fuzz(self): + def get_out_axis_size(a, b, axis): + return None, (axis is None or a.ndim == 1) + + self.check_unary_fuzz(np.add.reduce, get_out_axis_size, + dtype=np.int16, count=500) + + def test_binary_ufunc_reduceat_fuzz(self): + def get_out_axis_size(a, b, axis): + if axis is None: + if a.ndim == 1: + return a.size, False + else: + return 'skip', False # reduceat doesn't support this + else: + return a.shape[axis], False + + def do_reduceat(a, out, axis): + if axis is None: + size = len(a) + step = size//len(out) + else: + size = a.shape[axis] + step = a.shape[axis] // out.shape[axis] + idx = np.arange(0, size, step) + return np.add.reduceat(a, idx, out=out, axis=axis) + + self.check_unary_fuzz(do_reduceat, get_out_axis_size, + dtype=np.int16, count=500) + + def test_binary_ufunc_reduceat_manual(self): + def check(ufunc, a, ind, out): + c1 = ufunc.reduceat(a.copy(), ind.copy(), out=out.copy()) + c2 = ufunc.reduceat(a, ind, out=out) + assert_array_equal(c1, c2) + + # Exactly same input/output arrays + a = np.arange(10000, dtype=np.int16) + check(np.add, a, a[::-1].copy(), a) + + # Overlap with index + a = np.arange(10000, dtype=np.int16) + check(np.add, a, a[::-1], a) + + @pytest.mark.slow + def test_unary_gufunc_fuzz(self): + shapes = [7, 13, 8, 21, 29, 32] + gufunc = _umath_tests.euclidean_pdist + + rng = np.random.RandomState(1234) + + for ndim in range(2, 6): + x = rng.rand(*shapes[:ndim]) + + it = iter_random_view_pairs(x, same_steps=False, equal_size=True) + + min_count = 500 // (ndim + 1)**2 + + overlapping = 0 + while overlapping < min_count: + a, b = next(it) + + if min(a.shape[-2:]) < 2 or min(b.shape[-2:]) < 2 or a.shape[-1] < 2: + continue + + # Ensure the shapes are so that euclidean_pdist is happy + if b.shape[-1] > b.shape[-2]: + b = b[...,0,:] + else: + b = b[...,:,0] + + n = a.shape[-2] + p = n * (n - 1) // 2 + if p <= b.shape[-1] and p > 0: + b = b[...,:p] + else: + n = max(2, int(np.sqrt(b.shape[-1]))//2) + p = n * (n - 1) // 2 + a = a[...,:n,:] + b = b[...,:p] + + # Call + if np.shares_memory(a, b): + overlapping += 1 + + with np.errstate(over='ignore', invalid='ignore'): + assert_copy_equivalent(gufunc, [a], out=b) + + def test_ufunc_at_manual(self): + def check(ufunc, a, ind, b=None): + a0 = a.copy() + if b is None: + ufunc.at(a0, ind.copy()) + c1 = a0.copy() + ufunc.at(a, ind) + c2 = a.copy() + else: + ufunc.at(a0, ind.copy(), b.copy()) + c1 = a0.copy() + ufunc.at(a, ind, b) + c2 = a.copy() + assert_array_equal(c1, c2) + + # Overlap with index + a = np.arange(10000, dtype=np.int16) + check(np.invert, a[::-1], a) + + # Overlap with second data array + a = np.arange(100, dtype=np.int16) + ind = np.arange(0, 100, 2, dtype=np.int16) + check(np.add, a, ind, a[25:75]) + + def test_unary_ufunc_1d_manual(self): + # Exercise ufunc fast-paths (that avoid creation of an `np.nditer`) + + def check(a, b): + a_orig = a.copy() + b_orig = b.copy() + + b0 = b.copy() + c1 = ufunc(a, out=b0) + c2 = ufunc(a, out=b) + assert_array_equal(c1, c2) + + # Trigger "fancy ufunc loop" code path + mask = view_element_first_byte(b).view(np.bool) + + a[...] = a_orig + b[...] = b_orig + c1 = ufunc(a, out=b.copy(), where=mask.copy()).copy() + + a[...] = a_orig + b[...] = b_orig + c2 = ufunc(a, out=b, where=mask.copy()).copy() + + # Also, mask overlapping with output + a[...] = a_orig + b[...] = b_orig + c3 = ufunc(a, out=b, where=mask).copy() + + assert_array_equal(c1, c2) + assert_array_equal(c1, c3) + + dtypes = [np.int8, np.int16, np.int32, np.int64, np.float32, + np.float64, np.complex64, np.complex128] + dtypes = [np.dtype(x) for x in dtypes] + + for dtype in dtypes: + if np.issubdtype(dtype, np.integer): + ufunc = np.invert + else: + ufunc = np.reciprocal + + n = 1000 + k = 10 + indices = [ + np.index_exp[:n], + np.index_exp[k:k+n], + np.index_exp[n-1::-1], + np.index_exp[k+n-1:k-1:-1], + np.index_exp[:2*n:2], + np.index_exp[k:k+2*n:2], + np.index_exp[2*n-1::-2], + np.index_exp[k+2*n-1:k-1:-2], + ] + + for xi, yi in itertools.product(indices, indices): + v = np.arange(1, 1 + n*2 + k, dtype=dtype) + x = v[xi] + y = v[yi] + + with np.errstate(all='ignore'): + check(x, y) + + # Scalar cases + check(x[:1], y) + check(x[-1:], y) + check(x[:1].reshape([]), y) + check(x[-1:].reshape([]), y) + + def test_unary_ufunc_where_same(self): + # Check behavior at wheremask overlap + ufunc = np.invert + + def check(a, out, mask): + c1 = ufunc(a, out=out.copy(), where=mask.copy()) + c2 = ufunc(a, out=out, where=mask) + assert_array_equal(c1, c2) + + # Check behavior with same input and output arrays + x = np.arange(100).astype(np.bool) + check(x, x, x) + check(x, x.copy(), x) + check(x, x, x.copy()) + + @pytest.mark.slow + def test_binary_ufunc_1d_manual(self): + ufunc = np.add + + def check(a, b, c): + c0 = c.copy() + c1 = ufunc(a, b, out=c0) + c2 = ufunc(a, b, out=c) + assert_array_equal(c1, c2) + + for dtype in [np.int8, np.int16, np.int32, np.int64, + np.float32, np.float64, np.complex64, np.complex128]: + # Check different data dependency orders + + n = 1000 + k = 10 + + indices = [] + for p in [1, 2]: + indices.extend([ + np.index_exp[:p*n:p], + np.index_exp[k:k+p*n:p], + np.index_exp[p*n-1::-p], + np.index_exp[k+p*n-1:k-1:-p], + ]) + + for x, y, z in itertools.product(indices, indices, indices): + v = np.arange(6*n).astype(dtype) + x = v[x] + y = v[y] + z = v[z] + + check(x, y, z) + + # Scalar cases + check(x[:1], y, z) + check(x[-1:], y, z) + check(x[:1].reshape([]), y, z) + check(x[-1:].reshape([]), y, z) + check(x, y[:1], z) + check(x, y[-1:], z) + check(x, y[:1].reshape([]), z) + check(x, y[-1:].reshape([]), z) + + def test_inplace_op_simple_manual(self): + rng = np.random.RandomState(1234) + x = rng.rand(200, 200) # bigger than bufsize + + x += x.T + assert_array_equal(x - x.T, 0) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_mem_policy.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_mem_policy.py new file mode 100644 index 0000000000000000000000000000000000000000..9cbbedeca0f51aa00a2983657736866140ac5279 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_mem_policy.py @@ -0,0 +1,446 @@ +import asyncio +import gc +import os +import sys +import threading +import warnings + +import pytest + +import numpy as np +from numpy.testing import extbuild, assert_warns, IS_WASM +from numpy._core.multiarray import get_handler_name + + +# FIXME: numpy.testing.extbuild uses `numpy.distutils`, so this won't work on +# Python 3.12 and up. It's an internal test utility, so for now we just skip +# these tests. + + +@pytest.fixture +def get_module(tmp_path): + """ Add a memory policy that returns a false pointer 64 bytes into the + actual allocation, and fill the prefix with some text. Then check at each + memory manipulation that the prefix exists, to make sure all alloc/realloc/ + free/calloc go via the functions here. + """ + if sys.platform.startswith('cygwin'): + pytest.skip('link fails on cygwin') + if IS_WASM: + pytest.skip("Can't build module inside Wasm") + functions = [ + ("get_default_policy", "METH_NOARGS", """ + Py_INCREF(PyDataMem_DefaultHandler); + return PyDataMem_DefaultHandler; + """), + ("set_secret_data_policy", "METH_NOARGS", """ + PyObject *secret_data = + PyCapsule_New(&secret_data_handler, "mem_handler", NULL); + if (secret_data == NULL) { + return NULL; + } + PyObject *old = PyDataMem_SetHandler(secret_data); + Py_DECREF(secret_data); + return old; + """), + ("set_old_policy", "METH_O", """ + PyObject *old; + if (args != NULL && PyCapsule_CheckExact(args)) { + old = PyDataMem_SetHandler(args); + } + else { + old = PyDataMem_SetHandler(NULL); + } + return old; + """), + ("get_array", "METH_NOARGS", """ + char *buf = (char *)malloc(20); + npy_intp dims[1]; + dims[0] = 20; + PyArray_Descr *descr = PyArray_DescrNewFromType(NPY_UINT8); + return PyArray_NewFromDescr(&PyArray_Type, descr, 1, dims, NULL, + buf, NPY_ARRAY_WRITEABLE, NULL); + """), + ("set_own", "METH_O", """ + if (!PyArray_Check(args)) { + PyErr_SetString(PyExc_ValueError, + "need an ndarray"); + return NULL; + } + PyArray_ENABLEFLAGS((PyArrayObject*)args, NPY_ARRAY_OWNDATA); + // Maybe try this too? + // PyArray_BASE(PyArrayObject *)args) = NULL; + Py_RETURN_NONE; + """), + ("get_array_with_base", "METH_NOARGS", """ + char *buf = (char *)malloc(20); + npy_intp dims[1]; + dims[0] = 20; + PyArray_Descr *descr = PyArray_DescrNewFromType(NPY_UINT8); + PyObject *arr = PyArray_NewFromDescr(&PyArray_Type, descr, 1, dims, + NULL, buf, + NPY_ARRAY_WRITEABLE, NULL); + if (arr == NULL) return NULL; + PyObject *obj = PyCapsule_New(buf, "buf capsule", + (PyCapsule_Destructor)&warn_on_free); + if (obj == NULL) { + Py_DECREF(arr); + return NULL; + } + if (PyArray_SetBaseObject((PyArrayObject *)arr, obj) < 0) { + Py_DECREF(arr); + Py_DECREF(obj); + return NULL; + } + return arr; + + """), + ] + prologue = ''' + #define NPY_TARGET_VERSION NPY_1_22_API_VERSION + #define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION + #include + /* + * This struct allows the dynamic configuration of the allocator funcs + * of the `secret_data_allocator`. It is provided here for + * demonstration purposes, as a valid `ctx` use-case scenario. + */ + typedef struct { + void *(*malloc)(size_t); + void *(*calloc)(size_t, size_t); + void *(*realloc)(void *, size_t); + void (*free)(void *); + } SecretDataAllocatorFuncs; + + NPY_NO_EXPORT void * + shift_alloc(void *ctx, size_t sz) { + SecretDataAllocatorFuncs *funcs = (SecretDataAllocatorFuncs *)ctx; + char *real = (char *)funcs->malloc(sz + 64); + if (real == NULL) { + return NULL; + } + snprintf(real, 64, "originally allocated %ld", (unsigned long)sz); + return (void *)(real + 64); + } + NPY_NO_EXPORT void * + shift_zero(void *ctx, size_t sz, size_t cnt) { + SecretDataAllocatorFuncs *funcs = (SecretDataAllocatorFuncs *)ctx; + char *real = (char *)funcs->calloc(sz + 64, cnt); + if (real == NULL) { + return NULL; + } + snprintf(real, 64, "originally allocated %ld via zero", + (unsigned long)sz); + return (void *)(real + 64); + } + NPY_NO_EXPORT void + shift_free(void *ctx, void * p, npy_uintp sz) { + SecretDataAllocatorFuncs *funcs = (SecretDataAllocatorFuncs *)ctx; + if (p == NULL) { + return ; + } + char *real = (char *)p - 64; + if (strncmp(real, "originally allocated", 20) != 0) { + fprintf(stdout, "uh-oh, unmatched shift_free, " + "no appropriate prefix\\n"); + /* Make C runtime crash by calling free on the wrong address */ + funcs->free((char *)p + 10); + /* funcs->free(real); */ + } + else { + npy_uintp i = (npy_uintp)atoi(real +20); + if (i != sz) { + fprintf(stderr, "uh-oh, unmatched shift_free" + "(ptr, %ld) but allocated %ld\\n", sz, i); + /* This happens in some places, only print */ + funcs->free(real); + } + else { + funcs->free(real); + } + } + } + NPY_NO_EXPORT void * + shift_realloc(void *ctx, void * p, npy_uintp sz) { + SecretDataAllocatorFuncs *funcs = (SecretDataAllocatorFuncs *)ctx; + if (p != NULL) { + char *real = (char *)p - 64; + if (strncmp(real, "originally allocated", 20) != 0) { + fprintf(stdout, "uh-oh, unmatched shift_realloc\\n"); + return realloc(p, sz); + } + return (void *)((char *)funcs->realloc(real, sz + 64) + 64); + } + else { + char *real = (char *)funcs->realloc(p, sz + 64); + if (real == NULL) { + return NULL; + } + snprintf(real, 64, "originally allocated " + "%ld via realloc", (unsigned long)sz); + return (void *)(real + 64); + } + } + /* As an example, we use the standard {m|c|re}alloc/free funcs. */ + static SecretDataAllocatorFuncs secret_data_handler_ctx = { + malloc, + calloc, + realloc, + free + }; + static PyDataMem_Handler secret_data_handler = { + "secret_data_allocator", + 1, + { + &secret_data_handler_ctx, /* ctx */ + shift_alloc, /* malloc */ + shift_zero, /* calloc */ + shift_realloc, /* realloc */ + shift_free /* free */ + } + }; + void warn_on_free(void *capsule) { + PyErr_WarnEx(PyExc_UserWarning, "in warn_on_free", 1); + void * obj = PyCapsule_GetPointer(capsule, + PyCapsule_GetName(capsule)); + free(obj); + }; + ''' + more_init = "import_array();" + try: + import mem_policy + return mem_policy + except ImportError: + pass + # if it does not exist, build and load it + return extbuild.build_and_import_extension('mem_policy', + functions, + prologue=prologue, + include_dirs=[np.get_include()], + build_dir=tmp_path, + more_init=more_init) + + +@pytest.mark.skipif(sys.version_info >= (3, 12), reason="no numpy.distutils") +def test_set_policy(get_module): + + get_handler_name = np._core.multiarray.get_handler_name + get_handler_version = np._core.multiarray.get_handler_version + orig_policy_name = get_handler_name() + + a = np.arange(10).reshape((2, 5)) # a doesn't own its own data + assert get_handler_name(a) is None + assert get_handler_version(a) is None + assert get_handler_name(a.base) == orig_policy_name + assert get_handler_version(a.base) == 1 + + orig_policy = get_module.set_secret_data_policy() + + b = np.arange(10).reshape((2, 5)) # b doesn't own its own data + assert get_handler_name(b) is None + assert get_handler_version(b) is None + assert get_handler_name(b.base) == 'secret_data_allocator' + assert get_handler_version(b.base) == 1 + + if orig_policy_name == 'default_allocator': + get_module.set_old_policy(None) # tests PyDataMem_SetHandler(NULL) + assert get_handler_name() == 'default_allocator' + else: + get_module.set_old_policy(orig_policy) + assert get_handler_name() == orig_policy_name + + +@pytest.mark.skipif(sys.version_info >= (3, 12), reason="no numpy.distutils") +def test_default_policy_singleton(get_module): + get_handler_name = np._core.multiarray.get_handler_name + + # set the policy to default + orig_policy = get_module.set_old_policy(None) + + assert get_handler_name() == 'default_allocator' + + # re-set the policy to default + def_policy_1 = get_module.set_old_policy(None) + + assert get_handler_name() == 'default_allocator' + + # set the policy to original + def_policy_2 = get_module.set_old_policy(orig_policy) + + # since default policy is a singleton, + # these should be the same object + assert def_policy_1 is def_policy_2 is get_module.get_default_policy() + + +@pytest.mark.skipif(sys.version_info >= (3, 12), reason="no numpy.distutils") +def test_policy_propagation(get_module): + # The memory policy goes hand-in-hand with flags.owndata + + class MyArr(np.ndarray): + pass + + get_handler_name = np._core.multiarray.get_handler_name + orig_policy_name = get_handler_name() + a = np.arange(10).view(MyArr).reshape((2, 5)) + assert get_handler_name(a) is None + assert a.flags.owndata is False + + assert get_handler_name(a.base) is None + assert a.base.flags.owndata is False + + assert get_handler_name(a.base.base) == orig_policy_name + assert a.base.base.flags.owndata is True + + +async def concurrent_context1(get_module, orig_policy_name, event): + if orig_policy_name == 'default_allocator': + get_module.set_secret_data_policy() + assert get_handler_name() == 'secret_data_allocator' + else: + get_module.set_old_policy(None) + assert get_handler_name() == 'default_allocator' + event.set() + + +async def concurrent_context2(get_module, orig_policy_name, event): + await event.wait() + # the policy is not affected by changes in parallel contexts + assert get_handler_name() == orig_policy_name + # change policy in the child context + if orig_policy_name == 'default_allocator': + get_module.set_secret_data_policy() + assert get_handler_name() == 'secret_data_allocator' + else: + get_module.set_old_policy(None) + assert get_handler_name() == 'default_allocator' + + +async def async_test_context_locality(get_module): + orig_policy_name = np._core.multiarray.get_handler_name() + + event = asyncio.Event() + # the child contexts inherit the parent policy + concurrent_task1 = asyncio.create_task( + concurrent_context1(get_module, orig_policy_name, event)) + concurrent_task2 = asyncio.create_task( + concurrent_context2(get_module, orig_policy_name, event)) + await concurrent_task1 + await concurrent_task2 + + # the parent context is not affected by child policy changes + assert np._core.multiarray.get_handler_name() == orig_policy_name + + +@pytest.mark.skipif(sys.version_info >= (3, 12), reason="no numpy.distutils") +def test_context_locality(get_module): + if (sys.implementation.name == 'pypy' + and sys.pypy_version_info[:3] < (7, 3, 6)): + pytest.skip('no context-locality support in PyPy < 7.3.6') + asyncio.run(async_test_context_locality(get_module)) + + +def concurrent_thread1(get_module, event): + get_module.set_secret_data_policy() + assert np._core.multiarray.get_handler_name() == 'secret_data_allocator' + event.set() + + +def concurrent_thread2(get_module, event): + event.wait() + # the policy is not affected by changes in parallel threads + assert np._core.multiarray.get_handler_name() == 'default_allocator' + # change policy in the child thread + get_module.set_secret_data_policy() + + +@pytest.mark.skipif(sys.version_info >= (3, 12), reason="no numpy.distutils") +def test_thread_locality(get_module): + orig_policy_name = np._core.multiarray.get_handler_name() + + event = threading.Event() + # the child threads do not inherit the parent policy + concurrent_task1 = threading.Thread(target=concurrent_thread1, + args=(get_module, event)) + concurrent_task2 = threading.Thread(target=concurrent_thread2, + args=(get_module, event)) + concurrent_task1.start() + concurrent_task2.start() + concurrent_task1.join() + concurrent_task2.join() + + # the parent thread is not affected by child policy changes + assert np._core.multiarray.get_handler_name() == orig_policy_name + + +@pytest.mark.skipif(sys.version_info >= (3, 12), reason="no numpy.distutils") +@pytest.mark.skip(reason="too slow, see gh-23975") +def test_new_policy(get_module): + a = np.arange(10) + orig_policy_name = np._core.multiarray.get_handler_name(a) + + orig_policy = get_module.set_secret_data_policy() + + b = np.arange(10) + assert np._core.multiarray.get_handler_name(b) == 'secret_data_allocator' + + # test array manipulation. This is slow + if orig_policy_name == 'default_allocator': + # when the np._core.test tests recurse into this test, the + # policy will be set so this "if" will be false, preventing + # infinite recursion + # + # if needed, debug this by + # - running tests with -- -s (to not capture stdout/stderr + # - setting verbose=2 + # - setting extra_argv=['-vv'] here + assert np._core.test('full', verbose=1, extra_argv=[]) + # also try the ma tests, the pickling test is quite tricky + assert np.ma.test('full', verbose=1, extra_argv=[]) + + get_module.set_old_policy(orig_policy) + + c = np.arange(10) + assert np._core.multiarray.get_handler_name(c) == orig_policy_name + + +@pytest.mark.skipif(sys.version_info >= (3, 12), reason="no numpy.distutils") +@pytest.mark.xfail(sys.implementation.name == "pypy", + reason=("bad interaction between getenv and " + "os.environ inside pytest")) +@pytest.mark.parametrize("policy", ["0", "1", None]) +def test_switch_owner(get_module, policy): + a = get_module.get_array() + assert np._core.multiarray.get_handler_name(a) is None + get_module.set_own(a) + + if policy is None: + # See what we expect to be set based on the env variable + policy = os.getenv("NUMPY_WARN_IF_NO_MEM_POLICY", "0") == "1" + oldval = None + else: + policy = policy == "1" + oldval = np._core._multiarray_umath._set_numpy_warn_if_no_mem_policy( + policy) + try: + # The policy should be NULL, so we have to assume we can call + # "free". A warning is given if the policy == "1" + if policy: + with assert_warns(RuntimeWarning) as w: + del a + gc.collect() + else: + del a + gc.collect() + + finally: + if oldval is not None: + np._core._multiarray_umath._set_numpy_warn_if_no_mem_policy(oldval) + + +@pytest.mark.skipif(sys.version_info >= (3, 12), reason="no numpy.distutils") +def test_owner_is_base(get_module): + a = get_module.get_array_with_base() + with pytest.warns(UserWarning, match='warn_on_free'): + del a + gc.collect() + gc.collect() diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_memmap.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_memmap.py new file mode 100644 index 0000000000000000000000000000000000000000..9603e8316e1db8cd37f03740a80fe5c864d3a1dc --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_memmap.py @@ -0,0 +1,221 @@ +import sys +import os +import mmap +import pytest +from pathlib import Path +from tempfile import NamedTemporaryFile, TemporaryFile + +from numpy import ( + memmap, sum, average, prod, ndarray, isscalar, add, subtract, multiply) + +from numpy import arange, allclose, asarray +from numpy.testing import ( + assert_, assert_equal, assert_array_equal, suppress_warnings, IS_PYPY, + break_cycles + ) + +class TestMemmap: + def setup_method(self): + self.tmpfp = NamedTemporaryFile(prefix='mmap') + self.shape = (3, 4) + self.dtype = 'float32' + self.data = arange(12, dtype=self.dtype) + self.data.resize(self.shape) + + def teardown_method(self): + self.tmpfp.close() + self.data = None + if IS_PYPY: + break_cycles() + break_cycles() + + def test_roundtrip(self): + # Write data to file + fp = memmap(self.tmpfp, dtype=self.dtype, mode='w+', + shape=self.shape) + fp[:] = self.data[:] + del fp # Test __del__ machinery, which handles cleanup + + # Read data back from file + newfp = memmap(self.tmpfp, dtype=self.dtype, mode='r', + shape=self.shape) + assert_(allclose(self.data, newfp)) + assert_array_equal(self.data, newfp) + assert_equal(newfp.flags.writeable, False) + + def test_open_with_filename(self, tmp_path): + tmpname = tmp_path / 'mmap' + fp = memmap(tmpname, dtype=self.dtype, mode='w+', + shape=self.shape) + fp[:] = self.data[:] + del fp + + def test_unnamed_file(self): + with TemporaryFile() as f: + fp = memmap(f, dtype=self.dtype, shape=self.shape) + del fp + + def test_attributes(self): + offset = 1 + mode = "w+" + fp = memmap(self.tmpfp, dtype=self.dtype, mode=mode, + shape=self.shape, offset=offset) + assert_equal(offset, fp.offset) + assert_equal(mode, fp.mode) + del fp + + def test_filename(self, tmp_path): + tmpname = tmp_path / "mmap" + fp = memmap(tmpname, dtype=self.dtype, mode='w+', + shape=self.shape) + abspath = Path(os.path.abspath(tmpname)) + fp[:] = self.data[:] + assert_equal(abspath, fp.filename) + b = fp[:1] + assert_equal(abspath, b.filename) + del b + del fp + + def test_path(self, tmp_path): + tmpname = tmp_path / "mmap" + fp = memmap(Path(tmpname), dtype=self.dtype, mode='w+', + shape=self.shape) + # os.path.realpath does not resolve symlinks on Windows + # see: https://bugs.python.org/issue9949 + # use Path.resolve, just as memmap class does internally + abspath = str(Path(tmpname).resolve()) + fp[:] = self.data[:] + assert_equal(abspath, str(fp.filename.resolve())) + b = fp[:1] + assert_equal(abspath, str(b.filename.resolve())) + del b + del fp + + def test_filename_fileobj(self): + fp = memmap(self.tmpfp, dtype=self.dtype, mode="w+", + shape=self.shape) + assert_equal(fp.filename, self.tmpfp.name) + + @pytest.mark.skipif(sys.platform == 'gnu0', + reason="Known to fail on hurd") + def test_flush(self): + fp = memmap(self.tmpfp, dtype=self.dtype, mode='w+', + shape=self.shape) + fp[:] = self.data[:] + assert_equal(fp[0], self.data[0]) + fp.flush() + + def test_del(self): + # Make sure a view does not delete the underlying mmap + fp_base = memmap(self.tmpfp, dtype=self.dtype, mode='w+', + shape=self.shape) + fp_base[0] = 5 + fp_view = fp_base[0:1] + assert_equal(fp_view[0], 5) + del fp_view + # Should still be able to access and assign values after + # deleting the view + assert_equal(fp_base[0], 5) + fp_base[0] = 6 + assert_equal(fp_base[0], 6) + + def test_arithmetic_drops_references(self): + fp = memmap(self.tmpfp, dtype=self.dtype, mode='w+', + shape=self.shape) + tmp = (fp + 10) + if isinstance(tmp, memmap): + assert_(tmp._mmap is not fp._mmap) + + def test_indexing_drops_references(self): + fp = memmap(self.tmpfp, dtype=self.dtype, mode='w+', + shape=self.shape) + tmp = fp[(1, 2), (2, 3)] + if isinstance(tmp, memmap): + assert_(tmp._mmap is not fp._mmap) + + def test_slicing_keeps_references(self): + fp = memmap(self.tmpfp, dtype=self.dtype, mode='w+', + shape=self.shape) + assert_(fp[:2, :2]._mmap is fp._mmap) + + def test_view(self): + fp = memmap(self.tmpfp, dtype=self.dtype, shape=self.shape) + new1 = fp.view() + new2 = new1.view() + assert_(new1.base is fp) + assert_(new2.base is fp) + new_array = asarray(fp) + assert_(new_array.base is fp) + + def test_ufunc_return_ndarray(self): + fp = memmap(self.tmpfp, dtype=self.dtype, shape=self.shape) + fp[:] = self.data + + with suppress_warnings() as sup: + sup.filter(FutureWarning, "np.average currently does not preserve") + for unary_op in [sum, average, prod]: + result = unary_op(fp) + assert_(isscalar(result)) + assert_(result.__class__ is self.data[0, 0].__class__) + + assert_(unary_op(fp, axis=0).__class__ is ndarray) + assert_(unary_op(fp, axis=1).__class__ is ndarray) + + for binary_op in [add, subtract, multiply]: + assert_(binary_op(fp, self.data).__class__ is ndarray) + assert_(binary_op(self.data, fp).__class__ is ndarray) + assert_(binary_op(fp, fp).__class__ is ndarray) + + fp += 1 + assert(fp.__class__ is memmap) + add(fp, 1, out=fp) + assert(fp.__class__ is memmap) + + def test_getitem(self): + fp = memmap(self.tmpfp, dtype=self.dtype, shape=self.shape) + fp[:] = self.data + + assert_(fp[1:, :-1].__class__ is memmap) + # Fancy indexing returns a copy that is not memmapped + assert_(fp[[0, 1]].__class__ is ndarray) + + def test_memmap_subclass(self): + class MemmapSubClass(memmap): + pass + + fp = MemmapSubClass(self.tmpfp, dtype=self.dtype, shape=self.shape) + fp[:] = self.data + + # We keep previous behavior for subclasses of memmap, i.e. the + # ufunc and __getitem__ output is never turned into a ndarray + assert_(sum(fp, axis=0).__class__ is MemmapSubClass) + assert_(sum(fp).__class__ is MemmapSubClass) + assert_(fp[1:, :-1].__class__ is MemmapSubClass) + assert(fp[[0, 1]].__class__ is MemmapSubClass) + + def test_mmap_offset_greater_than_allocation_granularity(self): + size = 5 * mmap.ALLOCATIONGRANULARITY + offset = mmap.ALLOCATIONGRANULARITY + 1 + fp = memmap(self.tmpfp, shape=size, mode='w+', offset=offset) + assert_(fp.offset == offset) + + def test_no_shape(self): + self.tmpfp.write(b'a'*16) + mm = memmap(self.tmpfp, dtype='float64') + assert_equal(mm.shape, (2,)) + + def test_empty_array(self): + # gh-12653 + with pytest.raises(ValueError, match='empty file'): + memmap(self.tmpfp, shape=(0,4), mode='w+') + + self.tmpfp.write(b'\0') + + # ok now the file is not empty + memmap(self.tmpfp, shape=(0,4), mode='w+') + + def test_shape_type(self): + memmap(self.tmpfp, shape=3, mode='w+') + memmap(self.tmpfp, shape=self.shape, mode='w+') + memmap(self.tmpfp, shape=list(self.shape), mode='w+') + memmap(self.tmpfp, shape=asarray(self.shape), mode='w+') diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_multiarray.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_multiarray.py new file mode 100644 index 0000000000000000000000000000000000000000..81123b1128c84857c3d2eb6e30f151c1658b6776 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_multiarray.py @@ -0,0 +1,10239 @@ +from __future__ import annotations + +import collections.abc +import tempfile +import sys +import warnings +import operator +import io +import itertools +import functools +import ctypes +import os +import gc +import re +import weakref +import pytest +from contextlib import contextmanager +import pickle +import pathlib +import builtins +from decimal import Decimal +import mmap + +import numpy as np +import numpy._core._multiarray_tests as _multiarray_tests +from numpy._core._rational_tests import rational +from numpy.exceptions import AxisError, ComplexWarning +from numpy.testing import ( + assert_, assert_raises, assert_warns, assert_equal, assert_almost_equal, + assert_array_equal, assert_raises_regex, assert_array_almost_equal, + assert_allclose, IS_PYPY, IS_WASM, IS_PYSTON, HAS_REFCOUNT, + assert_array_less, runstring, temppath, suppress_warnings, break_cycles, + _SUPPORTS_SVE, assert_array_compare, + ) +from numpy.testing._private.utils import requires_memory, _no_tracing +from numpy._core.tests._locales import CommaDecimalPointLocale +from numpy.lib.recfunctions import repack_fields +from numpy._core.multiarray import _get_ndarray_c_version, dot + +# Need to test an object that does not fully implement math interface +from datetime import timedelta, datetime + + +def assert_arg_sorted(arr, arg): + # resulting array should be sorted and arg values should be unique + assert_equal(arr[arg], np.sort(arr)) + assert_equal(np.sort(arg), np.arange(len(arg))) + + +def assert_arr_partitioned(kth, k, arr_part): + assert_equal(arr_part[k], kth) + assert_array_compare(operator.__le__, arr_part[:k], kth) + assert_array_compare(operator.__ge__, arr_part[k:], kth) + + +def _aligned_zeros(shape, dtype=float, order="C", align=None): + """ + Allocate a new ndarray with aligned memory. + + The ndarray is guaranteed *not* aligned to twice the requested alignment. + Eg, if align=4, guarantees it is not aligned to 8. If align=None uses + dtype.alignment.""" + dtype = np.dtype(dtype) + if dtype == np.dtype(object): + # Can't do this, fall back to standard allocation (which + # should always be sufficiently aligned) + if align is not None: + raise ValueError("object array alignment not supported") + return np.zeros(shape, dtype=dtype, order=order) + if align is None: + align = dtype.alignment + if not hasattr(shape, '__len__'): + shape = (shape,) + size = functools.reduce(operator.mul, shape) * dtype.itemsize + buf = np.empty(size + 2*align + 1, np.uint8) + + ptr = buf.__array_interface__['data'][0] + offset = ptr % align + if offset != 0: + offset = align - offset + if (ptr % (2*align)) == 0: + offset += align + + # Note: slices producing 0-size arrays do not necessarily change + # data pointer --- so we use and allocate size+1 + buf = buf[offset:offset+size+1][:-1] + buf.fill(0) + data = np.ndarray(shape, dtype, buf, order=order) + return data + + +class TestFlags: + def setup_method(self): + self.a = np.arange(10) + + def test_writeable(self): + mydict = locals() + self.a.flags.writeable = False + assert_raises(ValueError, runstring, 'self.a[0] = 3', mydict) + self.a.flags.writeable = True + self.a[0] = 5 + self.a[0] = 0 + + def test_writeable_any_base(self): + # Ensure that any base being writeable is sufficient to change flag; + # this is especially interesting for arrays from an array interface. + arr = np.arange(10) + + class subclass(np.ndarray): + pass + + # Create subclass so base will not be collapsed, this is OK to change + view1 = arr.view(subclass) + view2 = view1[...] + arr.flags.writeable = False + view2.flags.writeable = False + view2.flags.writeable = True # Can be set to True again. + + arr = np.arange(10) + + class frominterface: + def __init__(self, arr): + self.arr = arr + self.__array_interface__ = arr.__array_interface__ + + view1 = np.asarray(frominterface) + view2 = view1[...] + view2.flags.writeable = False + view2.flags.writeable = True + + view1.flags.writeable = False + view2.flags.writeable = False + with assert_raises(ValueError): + # Must assume not writeable, since only base is not: + view2.flags.writeable = True + + def test_writeable_from_readonly(self): + # gh-9440 - make sure fromstring, from buffer on readonly buffers + # set writeable False + data = b'\x00' * 100 + vals = np.frombuffer(data, 'B') + assert_raises(ValueError, vals.setflags, write=True) + types = np.dtype( [('vals', 'u1'), ('res3', 'S4')] ) + values = np._core.records.fromstring(data, types) + vals = values['vals'] + assert_raises(ValueError, vals.setflags, write=True) + + def test_writeable_from_buffer(self): + data = bytearray(b'\x00' * 100) + vals = np.frombuffer(data, 'B') + assert_(vals.flags.writeable) + vals.setflags(write=False) + assert_(vals.flags.writeable is False) + vals.setflags(write=True) + assert_(vals.flags.writeable) + types = np.dtype( [('vals', 'u1'), ('res3', 'S4')] ) + values = np._core.records.fromstring(data, types) + vals = values['vals'] + assert_(vals.flags.writeable) + vals.setflags(write=False) + assert_(vals.flags.writeable is False) + vals.setflags(write=True) + assert_(vals.flags.writeable) + + @pytest.mark.skipif(IS_PYPY, reason="PyPy always copies") + def test_writeable_pickle(self): + import pickle + # Small arrays will be copied without setting base. + # See condition for using PyArray_SetBaseObject in + # array_setstate. + a = np.arange(1000) + for v in range(pickle.HIGHEST_PROTOCOL): + vals = pickle.loads(pickle.dumps(a, v)) + assert_(vals.flags.writeable) + assert_(isinstance(vals.base, bytes)) + + def test_writeable_from_c_data(self): + # Test that the writeable flag can be changed for an array wrapping + # low level C-data, but not owning its data. + # Also see that this is deprecated to change from python. + from numpy._core._multiarray_tests import get_c_wrapping_array + + arr_writeable = get_c_wrapping_array(True) + assert not arr_writeable.flags.owndata + assert arr_writeable.flags.writeable + view = arr_writeable[...] + + # Toggling the writeable flag works on the view: + view.flags.writeable = False + assert not view.flags.writeable + view.flags.writeable = True + assert view.flags.writeable + # Flag can be unset on the arr_writeable: + arr_writeable.flags.writeable = False + + arr_readonly = get_c_wrapping_array(False) + assert not arr_readonly.flags.owndata + assert not arr_readonly.flags.writeable + + for arr in [arr_writeable, arr_readonly]: + view = arr[...] + view.flags.writeable = False # make sure it is readonly + arr.flags.writeable = False + assert not arr.flags.writeable + + with assert_raises(ValueError): + view.flags.writeable = True + + with warnings.catch_warnings(): + warnings.simplefilter("error", DeprecationWarning) + with assert_raises(DeprecationWarning): + arr.flags.writeable = True + + with assert_warns(DeprecationWarning): + arr.flags.writeable = True + + def test_warnonwrite(self): + a = np.arange(10) + a.flags._warn_on_write = True + with warnings.catch_warnings(record=True) as w: + warnings.filterwarnings('always') + a[1] = 10 + a[2] = 10 + # only warn once + assert_(len(w) == 1) + + @pytest.mark.parametrize(["flag", "flag_value", "writeable"], + [("writeable", True, True), + # Delete _warn_on_write after deprecation and simplify + # the parameterization: + ("_warn_on_write", True, False), + ("writeable", False, False)]) + def test_readonly_flag_protocols(self, flag, flag_value, writeable): + a = np.arange(10) + setattr(a.flags, flag, flag_value) + + class MyArr(): + __array_struct__ = a.__array_struct__ + + assert memoryview(a).readonly is not writeable + assert a.__array_interface__['data'][1] is not writeable + assert np.asarray(MyArr()).flags.writeable is writeable + + def test_otherflags(self): + assert_equal(self.a.flags.carray, True) + assert_equal(self.a.flags['C'], True) + assert_equal(self.a.flags.farray, False) + assert_equal(self.a.flags.behaved, True) + assert_equal(self.a.flags.fnc, False) + assert_equal(self.a.flags.forc, True) + assert_equal(self.a.flags.owndata, True) + assert_equal(self.a.flags.writeable, True) + assert_equal(self.a.flags.aligned, True) + assert_equal(self.a.flags.writebackifcopy, False) + assert_equal(self.a.flags['X'], False) + assert_equal(self.a.flags['WRITEBACKIFCOPY'], False) + + def test_string_align(self): + a = np.zeros(4, dtype=np.dtype('|S4')) + assert_(a.flags.aligned) + # not power of two are accessed byte-wise and thus considered aligned + a = np.zeros(5, dtype=np.dtype('|S4')) + assert_(a.flags.aligned) + + def test_void_align(self): + a = np.zeros(4, dtype=np.dtype([("a", "i4"), ("b", "i4")])) + assert_(a.flags.aligned) + + +class TestHash: + # see #3793 + def test_int(self): + for st, ut, s in [(np.int8, np.uint8, 8), + (np.int16, np.uint16, 16), + (np.int32, np.uint32, 32), + (np.int64, np.uint64, 64)]: + for i in range(1, s): + assert_equal(hash(st(-2**i)), hash(-2**i), + err_msg="%r: -2**%d" % (st, i)) + assert_equal(hash(st(2**(i - 1))), hash(2**(i - 1)), + err_msg="%r: 2**%d" % (st, i - 1)) + assert_equal(hash(st(2**i - 1)), hash(2**i - 1), + err_msg="%r: 2**%d - 1" % (st, i)) + + i = max(i - 1, 1) + assert_equal(hash(ut(2**(i - 1))), hash(2**(i - 1)), + err_msg="%r: 2**%d" % (ut, i - 1)) + assert_equal(hash(ut(2**i - 1)), hash(2**i - 1), + err_msg="%r: 2**%d - 1" % (ut, i)) + + +class TestAttributes: + def setup_method(self): + self.one = np.arange(10) + self.two = np.arange(20).reshape(4, 5) + self.three = np.arange(60, dtype=np.float64).reshape(2, 5, 6) + + def test_attributes(self): + assert_equal(self.one.shape, (10,)) + assert_equal(self.two.shape, (4, 5)) + assert_equal(self.three.shape, (2, 5, 6)) + self.three.shape = (10, 3, 2) + assert_equal(self.three.shape, (10, 3, 2)) + self.three.shape = (2, 5, 6) + assert_equal(self.one.strides, (self.one.itemsize,)) + num = self.two.itemsize + assert_equal(self.two.strides, (5*num, num)) + num = self.three.itemsize + assert_equal(self.three.strides, (30*num, 6*num, num)) + assert_equal(self.one.ndim, 1) + assert_equal(self.two.ndim, 2) + assert_equal(self.three.ndim, 3) + num = self.two.itemsize + assert_equal(self.two.size, 20) + assert_equal(self.two.nbytes, 20*num) + assert_equal(self.two.itemsize, self.two.dtype.itemsize) + assert_equal(self.two.base, np.arange(20)) + + def test_dtypeattr(self): + assert_equal(self.one.dtype, np.dtype(np.int_)) + assert_equal(self.three.dtype, np.dtype(np.float64)) + assert_equal(self.one.dtype.char, np.dtype(int).char) + assert self.one.dtype.char in "lq" + assert_equal(self.three.dtype.char, 'd') + assert_(self.three.dtype.str[0] in '<>') + assert_equal(self.one.dtype.str[1], 'i') + assert_equal(self.three.dtype.str[1], 'f') + + def test_int_subclassing(self): + # Regression test for https://github.com/numpy/numpy/pull/3526 + + numpy_int = np.int_(0) + + # int_ doesn't inherit from Python int, because it's not fixed-width + assert_(not isinstance(numpy_int, int)) + + def test_stridesattr(self): + x = self.one + + def make_array(size, offset, strides): + return np.ndarray(size, buffer=x, dtype=int, + offset=offset*x.itemsize, + strides=strides*x.itemsize) + + assert_equal(make_array(4, 4, -1), np.array([4, 3, 2, 1])) + assert_raises(ValueError, make_array, 4, 4, -2) + assert_raises(ValueError, make_array, 4, 2, -1) + assert_raises(ValueError, make_array, 8, 3, 1) + assert_equal(make_array(8, 3, 0), np.array([3]*8)) + # Check behavior reported in gh-2503: + assert_raises(ValueError, make_array, (2, 3), 5, np.array([-2, -3])) + make_array(0, 0, 10) + + def test_set_stridesattr(self): + x = self.one + + def make_array(size, offset, strides): + try: + r = np.ndarray([size], dtype=int, buffer=x, + offset=offset*x.itemsize) + except Exception as e: + raise RuntimeError(e) + r.strides = strides = strides*x.itemsize + return r + + assert_equal(make_array(4, 4, -1), np.array([4, 3, 2, 1])) + assert_equal(make_array(7, 3, 1), np.array([3, 4, 5, 6, 7, 8, 9])) + assert_raises(ValueError, make_array, 4, 4, -2) + assert_raises(ValueError, make_array, 4, 2, -1) + assert_raises(RuntimeError, make_array, 8, 3, 1) + # Check that the true extent of the array is used. + # Test relies on as_strided base not exposing a buffer. + x = np.lib.stride_tricks.as_strided(np.arange(1), (10, 10), (0, 0)) + + def set_strides(arr, strides): + arr.strides = strides + + assert_raises(ValueError, set_strides, x, (10*x.itemsize, x.itemsize)) + + # Test for offset calculations: + x = np.lib.stride_tricks.as_strided(np.arange(10, dtype=np.int8)[-1], + shape=(10,), strides=(-1,)) + assert_raises(ValueError, set_strides, x[::-1], -1) + a = x[::-1] + a.strides = 1 + a[::2].strides = 2 + + # test 0d + arr_0d = np.array(0) + arr_0d.strides = () + assert_raises(TypeError, set_strides, arr_0d, None) + + def test_fill(self): + for t in "?bhilqpBHILQPfdgFDGO": + x = np.empty((3, 2, 1), t) + y = np.empty((3, 2, 1), t) + x.fill(1) + y[...] = 1 + assert_equal(x, y) + + def test_fill_max_uint64(self): + x = np.empty((3, 2, 1), dtype=np.uint64) + y = np.empty((3, 2, 1), dtype=np.uint64) + value = 2**64 - 1 + y[...] = value + x.fill(value) + assert_array_equal(x, y) + + def test_fill_struct_array(self): + # Filling from a scalar + x = np.array([(0, 0.0), (1, 1.0)], dtype='i4,f8') + x.fill(x[0]) + assert_equal(x['f1'][1], x['f1'][0]) + # Filling from a tuple that can be converted + # to a scalar + x = np.zeros(2, dtype=[('a', 'f8'), ('b', 'i4')]) + x.fill((3.5, -2)) + assert_array_equal(x['a'], [3.5, 3.5]) + assert_array_equal(x['b'], [-2, -2]) + + def test_fill_readonly(self): + # gh-22922 + a = np.zeros(11) + a.setflags(write=False) + with pytest.raises(ValueError, match=".*read-only"): + a.fill(0) + + def test_fill_subarrays(self): + # NOTE: + # This is also a regression test for a crash with PYTHONMALLOC=debug + + dtype = np.dtype("2i4')) + assert_(np.dtype([('a', 'i4')])) + + def test_structured_non_void(self): + fields = [('a', 'i8'), ('b', 'f8')]) + assert_equal(a == b, [False, True]) + assert_equal(a != b, [True, False]) + + a = np.array([(5, 42), (10, 1)], dtype=[('a', '>f8'), ('b', 'i8')]) + assert_equal(a == b, [False, True]) + assert_equal(a != b, [True, False]) + + # Including with embedded subarray dtype (although subarray comparison + # itself may still be a bit weird and compare the raw data) + a = np.array([(5, 42), (10, 1)], dtype=[('a', '10>f8'), ('b', '5i8')]) + assert_equal(a == b, [False, True]) + assert_equal(a != b, [True, False]) + + @pytest.mark.parametrize("op", [ + operator.eq, lambda x, y: operator.eq(y, x), + operator.ne, lambda x, y: operator.ne(y, x)]) + def test_void_comparison_failures(self, op): + # In principle, one could decide to return an array of False for some + # if comparisons are impossible. But right now we return TypeError + # when "void" dtype are involved. + x = np.zeros(3, dtype=[('a', 'i1')]) + y = np.zeros(3) + # Cannot compare non-structured to structured: + with pytest.raises(TypeError): + op(x, y) + + # Added title prevents promotion, but casts are OK: + y = np.zeros(3, dtype=[(('title', 'a'), 'i1')]) + assert np.can_cast(y.dtype, x.dtype) + with pytest.raises(TypeError): + op(x, y) + + x = np.zeros(3, dtype="V7") + y = np.zeros(3, dtype="V8") + with pytest.raises(TypeError): + op(x, y) + + def test_casting(self): + # Check that casting a structured array to change its byte order + # works + a = np.array([(1,)], dtype=[('a', 'i4')], casting='unsafe')) + b = a.astype([('a', '>i4')]) + a_tmp = a.byteswap() + a_tmp = a_tmp.view(a_tmp.dtype.newbyteorder()) + assert_equal(b, a_tmp) + assert_equal(a['a'][0], b['a'][0]) + + # Check that equality comparison works on structured arrays if + # they are 'equiv'-castable + a = np.array([(5, 42), (10, 1)], dtype=[('a', '>i4'), ('b', 'f8')]) + assert_(np.can_cast(a.dtype, b.dtype, casting='equiv')) + assert_equal(a == b, [True, True]) + + # Check that 'equiv' casting can change byte order + assert_(np.can_cast(a.dtype, b.dtype, casting='equiv')) + c = a.astype(b.dtype, casting='equiv') + assert_equal(a == c, [True, True]) + + # Check that 'safe' casting can change byte order and up-cast + # fields + t = [('a', 'f8')] + assert_(np.can_cast(a.dtype, t, casting='safe')) + c = a.astype(t, casting='safe') + assert_equal((c == np.array([(5, 42), (10, 1)], dtype=t)), + [True, True]) + + # Check that 'same_kind' casting can change byte order and + # change field widths within a "kind" + t = [('a', 'f4')] + assert_(np.can_cast(a.dtype, t, casting='same_kind')) + c = a.astype(t, casting='same_kind') + assert_equal((c == np.array([(5, 42), (10, 1)], dtype=t)), + [True, True]) + + # Check that casting fails if the casting rule should fail on + # any of the fields + t = [('a', '>i8'), ('b', 'i2'), ('b', 'i8'), ('b', 'i4')] + assert_(not np.can_cast(a.dtype, t, casting=casting)) + t = [('a', '>i4'), ('b', 'i8") + ab = np.array([(1, 2)], dtype=[A, B]) + ba = np.array([(1, 2)], dtype=[B, A]) + assert_raises(TypeError, np.concatenate, ab, ba) + assert_raises(TypeError, np.result_type, ab.dtype, ba.dtype) + assert_raises(TypeError, np.promote_types, ab.dtype, ba.dtype) + + # dtypes with same field names/order but different memory offsets + # and byte-order are promotable to packed nbo. + assert_equal(np.promote_types(ab.dtype, ba[['a', 'b']].dtype), + repack_fields(ab.dtype.newbyteorder('N'))) + + # gh-13667 + # dtypes with different fieldnames but castable field types are castable + assert_equal(np.can_cast(ab.dtype, ba.dtype), True) + assert_equal(ab.astype(ba.dtype).dtype, ba.dtype) + assert_equal(np.can_cast('f8,i8', [('f0', 'f8'), ('f1', 'i8')]), True) + assert_equal(np.can_cast('f8,i8', [('f1', 'f8'), ('f0', 'i8')]), True) + assert_equal(np.can_cast('f8,i8', [('f1', 'i8'), ('f0', 'f8')]), False) + assert_equal(np.can_cast('f8,i8', [('f1', 'i8'), ('f0', 'f8')], + casting='unsafe'), True) + + ab[:] = ba # make sure assignment still works + + # tests of type-promotion of corresponding fields + dt1 = np.dtype([("", "i4")]) + dt2 = np.dtype([("", "i8")]) + assert_equal(np.promote_types(dt1, dt2), np.dtype([('f0', 'i8')])) + assert_equal(np.promote_types(dt2, dt1), np.dtype([('f0', 'i8')])) + assert_raises(TypeError, np.promote_types, dt1, np.dtype([("", "V3")])) + assert_equal(np.promote_types('i4,f8', 'i8,f4'), + np.dtype([('f0', 'i8'), ('f1', 'f8')])) + # test nested case + dt1nest = np.dtype([("", dt1)]) + dt2nest = np.dtype([("", dt2)]) + assert_equal(np.promote_types(dt1nest, dt2nest), + np.dtype([('f0', np.dtype([('f0', 'i8')]))])) + + # note that offsets are lost when promoting: + dt = np.dtype({'names': ['x'], 'formats': ['i4'], 'offsets': [8]}) + a = np.ones(3, dtype=dt) + assert_equal(np.concatenate([a, a]).dtype, np.dtype([('x', 'i4')])) + + @pytest.mark.parametrize("dtype_dict", [ + dict(names=["a", "b"], formats=["i4", "f"], itemsize=100), + dict(names=["a", "b"], formats=["i4", "f"], + offsets=[0, 12])]) + @pytest.mark.parametrize("align", [True, False]) + def test_structured_promotion_packs(self, dtype_dict, align): + # Structured dtypes are packed when promoted (we consider the packed + # form to be "canonical"), so tere is no extra padding. + dtype = np.dtype(dtype_dict, align=align) + # Remove non "canonical" dtype options: + dtype_dict.pop("itemsize", None) + dtype_dict.pop("offsets", None) + expected = np.dtype(dtype_dict, align=align) + + res = np.promote_types(dtype, dtype) + assert res.itemsize == expected.itemsize + assert res.fields == expected.fields + + # But the "expected" one, should just be returned unchanged: + res = np.promote_types(expected, expected) + assert res is expected + + def test_structured_asarray_is_view(self): + # A scalar viewing an array preserves its view even when creating a + # new array. This test documents behaviour, it may not be the best + # desired behaviour. + arr = np.array([1], dtype="i,i") + scalar = arr[0] + assert not scalar.flags.owndata # view into the array + assert np.asarray(scalar).base is scalar + # But never when a dtype is passed in: + assert np.asarray(scalar, dtype=scalar.dtype).base is None + # A scalar which owns its data does not have this property. + # It is not easy to create one, one method is to use pickle: + scalar = pickle.loads(pickle.dumps(scalar)) + assert scalar.flags.owndata + assert np.asarray(scalar).base is None + +class TestBool: + def test_test_interning(self): + a0 = np.bool(0) + b0 = np.bool(False) + assert_(a0 is b0) + a1 = np.bool(1) + b1 = np.bool(True) + assert_(a1 is b1) + assert_(np.array([True])[0] is a1) + assert_(np.array(True)[()] is a1) + + def test_sum(self): + d = np.ones(101, dtype=bool) + assert_equal(d.sum(), d.size) + assert_equal(d[::2].sum(), d[::2].size) + assert_equal(d[::-2].sum(), d[::-2].size) + + d = np.frombuffer(b'\xff\xff' * 100, dtype=bool) + assert_equal(d.sum(), d.size) + assert_equal(d[::2].sum(), d[::2].size) + assert_equal(d[::-2].sum(), d[::-2].size) + + def check_count_nonzero(self, power, length): + powers = [2 ** i for i in range(length)] + for i in range(2**power): + l = [(i & x) != 0 for x in powers] + a = np.array(l, dtype=bool) + c = builtins.sum(l) + assert_equal(np.count_nonzero(a), c) + av = a.view(np.uint8) + av *= 3 + assert_equal(np.count_nonzero(a), c) + av *= 4 + assert_equal(np.count_nonzero(a), c) + av[av != 0] = 0xFF + assert_equal(np.count_nonzero(a), c) + + def test_count_nonzero(self): + # check all 12 bit combinations in a length 17 array + # covers most cases of the 16 byte unrolled code + self.check_count_nonzero(12, 17) + + @pytest.mark.slow + def test_count_nonzero_all(self): + # check all combinations in a length 17 array + # covers all cases of the 16 byte unrolled code + self.check_count_nonzero(17, 17) + + def test_count_nonzero_unaligned(self): + # prevent mistakes as e.g. gh-4060 + for o in range(7): + a = np.zeros((18,), dtype=bool)[o+1:] + a[:o] = True + assert_equal(np.count_nonzero(a), builtins.sum(a.tolist())) + a = np.ones((18,), dtype=bool)[o+1:] + a[:o] = False + assert_equal(np.count_nonzero(a), builtins.sum(a.tolist())) + + def _test_cast_from_flexible(self, dtype): + # empty string -> false + for n in range(3): + v = np.array(b'', (dtype, n)) + assert_equal(bool(v), False) + assert_equal(bool(v[()]), False) + assert_equal(v.astype(bool), False) + assert_(isinstance(v.astype(bool), np.ndarray)) + assert_(v[()].astype(bool) is np.False_) + + # anything else -> true + for n in range(1, 4): + for val in [b'a', b'0', b' ']: + v = np.array(val, (dtype, n)) + assert_equal(bool(v), True) + assert_equal(bool(v[()]), True) + assert_equal(v.astype(bool), True) + assert_(isinstance(v.astype(bool), np.ndarray)) + assert_(v[()].astype(bool) is np.True_) + + def test_cast_from_void(self): + self._test_cast_from_flexible(np.void) + + @pytest.mark.xfail(reason="See gh-9847") + def test_cast_from_unicode(self): + self._test_cast_from_flexible(np.str_) + + @pytest.mark.xfail(reason="See gh-9847") + def test_cast_from_bytes(self): + self._test_cast_from_flexible(np.bytes_) + + +class TestZeroSizeFlexible: + @staticmethod + def _zeros(shape, dtype=str): + dtype = np.dtype(dtype) + if dtype == np.void: + return np.zeros(shape, dtype=(dtype, 0)) + + # not constructable directly + dtype = np.dtype([('x', dtype, 0)]) + return np.zeros(shape, dtype=dtype)['x'] + + def test_create(self): + zs = self._zeros(10, bytes) + assert_equal(zs.itemsize, 0) + zs = self._zeros(10, np.void) + assert_equal(zs.itemsize, 0) + zs = self._zeros(10, str) + assert_equal(zs.itemsize, 0) + + def _test_sort_partition(self, name, kinds, **kwargs): + # Previously, these would all hang + for dt in [bytes, np.void, str]: + zs = self._zeros(10, dt) + sort_method = getattr(zs, name) + sort_func = getattr(np, name) + for kind in kinds: + sort_method(kind=kind, **kwargs) + sort_func(zs, kind=kind, **kwargs) + + def test_sort(self): + self._test_sort_partition('sort', kinds='qhs') + + def test_argsort(self): + self._test_sort_partition('argsort', kinds='qhs') + + def test_partition(self): + self._test_sort_partition('partition', kinds=['introselect'], kth=2) + + def test_argpartition(self): + self._test_sort_partition('argpartition', kinds=['introselect'], kth=2) + + def test_resize(self): + # previously an error + for dt in [bytes, np.void, str]: + zs = self._zeros(10, dt) + zs.resize(25) + zs.resize((10, 10)) + + def test_view(self): + for dt in [bytes, np.void, str]: + zs = self._zeros(10, dt) + + # viewing as itself should be allowed + assert_equal(zs.view(dt).dtype, np.dtype(dt)) + + # viewing as any non-empty type gives an empty result + assert_equal(zs.view((dt, 1)).shape, (0,)) + + def test_dumps(self): + zs = self._zeros(10, int) + assert_equal(zs, pickle.loads(zs.dumps())) + + def test_pickle(self): + for proto in range(2, pickle.HIGHEST_PROTOCOL + 1): + for dt in [bytes, np.void, str]: + zs = self._zeros(10, dt) + p = pickle.dumps(zs, protocol=proto) + zs2 = pickle.loads(p) + + assert_equal(zs.dtype, zs2.dtype) + + def test_pickle_empty(self): + """Checking if an empty array pickled and un-pickled will not cause a + segmentation fault""" + arr = np.array([]).reshape(999999, 0) + pk_dmp = pickle.dumps(arr) + pk_load = pickle.loads(pk_dmp) + + assert pk_load.size == 0 + + @pytest.mark.skipif(pickle.HIGHEST_PROTOCOL < 5, + reason="requires pickle protocol 5") + def test_pickle_with_buffercallback(self): + array = np.arange(10) + buffers = [] + bytes_string = pickle.dumps(array, buffer_callback=buffers.append, + protocol=5) + array_from_buffer = pickle.loads(bytes_string, buffers=buffers) + # when using pickle protocol 5 with buffer callbacks, + # array_from_buffer is reconstructed from a buffer holding a view + # to the initial array's data, so modifying an element in array + # should modify it in array_from_buffer too. + array[0] = -1 + assert array_from_buffer[0] == -1, array_from_buffer[0] + + +class TestMethods: + + sort_kinds = ['quicksort', 'heapsort', 'stable'] + + def test_all_where(self): + a = np.array([[True, False, True], + [False, False, False], + [True, True, True]]) + wh_full = np.array([[True, False, True], + [False, False, False], + [True, False, True]]) + wh_lower = np.array([[False], + [False], + [True]]) + for _ax in [0, None]: + assert_equal(a.all(axis=_ax, where=wh_lower), + np.all(a[wh_lower[:,0],:], axis=_ax)) + assert_equal(np.all(a, axis=_ax, where=wh_lower), + a[wh_lower[:,0],:].all(axis=_ax)) + + assert_equal(a.all(where=wh_full), True) + assert_equal(np.all(a, where=wh_full), True) + assert_equal(a.all(where=False), True) + assert_equal(np.all(a, where=False), True) + + def test_any_where(self): + a = np.array([[True, False, True], + [False, False, False], + [True, True, True]]) + wh_full = np.array([[False, True, False], + [True, True, True], + [False, False, False]]) + wh_middle = np.array([[False], + [True], + [False]]) + for _ax in [0, None]: + assert_equal(a.any(axis=_ax, where=wh_middle), + np.any(a[wh_middle[:,0],:], axis=_ax)) + assert_equal(np.any(a, axis=_ax, where=wh_middle), + a[wh_middle[:,0],:].any(axis=_ax)) + assert_equal(a.any(where=wh_full), False) + assert_equal(np.any(a, where=wh_full), False) + assert_equal(a.any(where=False), False) + assert_equal(np.any(a, where=False), False) + + @pytest.mark.parametrize("dtype", + ["i8", "U10", "object", "datetime64[ms]"]) + def test_any_and_all_result_dtype(self, dtype): + arr = np.ones(3, dtype=dtype) + assert arr.any().dtype == np.bool + assert arr.all().dtype == np.bool + + def test_any_and_all_object_dtype(self): + # (seberg) Not sure we should even allow dtype here, but it is. + arr = np.ones(3, dtype=object) + # keepdims to prevent getting a scalar. + assert arr.any(dtype=object, keepdims=True).dtype == object + assert arr.all(dtype=object, keepdims=True).dtype == object + + def test_compress(self): + tgt = [[5, 6, 7, 8, 9]] + arr = np.arange(10).reshape(2, 5) + out = arr.compress([0, 1], axis=0) + assert_equal(out, tgt) + + tgt = [[1, 3], [6, 8]] + out = arr.compress([0, 1, 0, 1, 0], axis=1) + assert_equal(out, tgt) + + tgt = [[1], [6]] + arr = np.arange(10).reshape(2, 5) + out = arr.compress([0, 1], axis=1) + assert_equal(out, tgt) + + arr = np.arange(10).reshape(2, 5) + out = arr.compress([0, 1]) + assert_equal(out, 1) + + def test_choose(self): + x = 2*np.ones((3,), dtype=int) + y = 3*np.ones((3,), dtype=int) + x2 = 2*np.ones((2, 3), dtype=int) + y2 = 3*np.ones((2, 3), dtype=int) + ind = np.array([0, 0, 1]) + + A = ind.choose((x, y)) + assert_equal(A, [2, 2, 3]) + + A = ind.choose((x2, y2)) + assert_equal(A, [[2, 2, 3], [2, 2, 3]]) + + A = ind.choose((x, y2)) + assert_equal(A, [[2, 2, 3], [2, 2, 3]]) + + oned = np.ones(1) + # gh-12031, caused SEGFAULT + assert_raises(TypeError, oned.choose,np.void(0), [oned]) + + out = np.array(0) + ret = np.choose(np.array(1), [10, 20, 30], out=out) + assert out is ret + assert_equal(out[()], 20) + + # gh-6272 check overlap on out + x = np.arange(5) + y = np.choose([0,0,0], [x[:3], x[:3], x[:3]], out=x[1:4], mode='wrap') + assert_equal(y, np.array([0, 1, 2])) + + def test_prod(self): + ba = [1, 2, 10, 11, 6, 5, 4] + ba2 = [[1, 2, 3, 4], [5, 6, 7, 9], [10, 3, 4, 5]] + + for ctype in [np.int16, np.uint16, np.int32, np.uint32, + np.float32, np.float64, np.complex64, np.complex128]: + a = np.array(ba, ctype) + a2 = np.array(ba2, ctype) + if ctype in ['1', 'b']: + assert_raises(ArithmeticError, a.prod) + assert_raises(ArithmeticError, a2.prod, axis=1) + else: + assert_equal(a.prod(axis=0), 26400) + assert_array_equal(a2.prod(axis=0), + np.array([50, 36, 84, 180], ctype)) + assert_array_equal(a2.prod(axis=-1), + np.array([24, 1890, 600], ctype)) + + @pytest.mark.parametrize('dtype', [None, object]) + def test_repeat(self, dtype): + m = np.array([1, 2, 3, 4, 5, 6], dtype=dtype) + m_rect = m.reshape((2, 3)) + + A = m.repeat([1, 3, 2, 1, 1, 2]) + assert_equal(A, [1, 2, 2, 2, 3, + 3, 4, 5, 6, 6]) + + A = m.repeat(2) + assert_equal(A, [1, 1, 2, 2, 3, 3, + 4, 4, 5, 5, 6, 6]) + + A = m_rect.repeat([2, 1], axis=0) + assert_equal(A, [[1, 2, 3], + [1, 2, 3], + [4, 5, 6]]) + + A = m_rect.repeat([1, 3, 2], axis=1) + assert_equal(A, [[1, 2, 2, 2, 3, 3], + [4, 5, 5, 5, 6, 6]]) + + A = m_rect.repeat(2, axis=0) + assert_equal(A, [[1, 2, 3], + [1, 2, 3], + [4, 5, 6], + [4, 5, 6]]) + + A = m_rect.repeat(2, axis=1) + assert_equal(A, [[1, 1, 2, 2, 3, 3], + [4, 4, 5, 5, 6, 6]]) + + def test_reshape(self): + arr = np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9], [10, 11, 12]]) + + tgt = [[1, 2, 3, 4, 5, 6], [7, 8, 9, 10, 11, 12]] + assert_equal(arr.reshape(2, 6), tgt) + + tgt = [[1, 2, 3, 4], [5, 6, 7, 8], [9, 10, 11, 12]] + assert_equal(arr.reshape(3, 4), tgt) + + tgt = [[1, 10, 8, 6], [4, 2, 11, 9], [7, 5, 3, 12]] + assert_equal(arr.reshape((3, 4), order='F'), tgt) + + tgt = [[1, 4, 7, 10], [2, 5, 8, 11], [3, 6, 9, 12]] + assert_equal(arr.T.reshape((3, 4), order='C'), tgt) + + def test_round(self): + def check_round(arr, expected, *round_args): + assert_equal(arr.round(*round_args), expected) + # With output array + out = np.zeros_like(arr) + res = arr.round(*round_args, out=out) + assert_equal(out, expected) + assert out is res + + check_round(np.array([1.2, 1.5]), [1, 2]) + check_round(np.array(1.5), 2) + check_round(np.array([12.2, 15.5]), [10, 20], -1) + check_round(np.array([12.15, 15.51]), [12.2, 15.5], 1) + # Complex rounding + check_round(np.array([4.5 + 1.5j]), [4 + 2j]) + check_round(np.array([12.5 + 15.5j]), [10 + 20j], -1) + + def test_squeeze(self): + a = np.array([[[1], [2], [3]]]) + assert_equal(a.squeeze(), [1, 2, 3]) + assert_equal(a.squeeze(axis=(0,)), [[1], [2], [3]]) + assert_raises(ValueError, a.squeeze, axis=(1,)) + assert_equal(a.squeeze(axis=(2,)), [[1, 2, 3]]) + + def test_transpose(self): + a = np.array([[1, 2], [3, 4]]) + assert_equal(a.transpose(), [[1, 3], [2, 4]]) + assert_raises(ValueError, lambda: a.transpose(0)) + assert_raises(ValueError, lambda: a.transpose(0, 0)) + assert_raises(ValueError, lambda: a.transpose(0, 1, 2)) + + def test_sort(self): + # test ordering for floats and complex containing nans. It is only + # necessary to check the less-than comparison, so sorts that + # only follow the insertion sort path are sufficient. We only + # test doubles and complex doubles as the logic is the same. + + # check doubles + msg = "Test real sort order with nans" + a = np.array([np.nan, 1, 0]) + b = np.sort(a) + assert_equal(b, a[::-1], msg) + # check complex + msg = "Test complex sort order with nans" + a = np.zeros(9, dtype=np.complex128) + a.real += [np.nan, np.nan, np.nan, 1, 0, 1, 1, 0, 0] + a.imag += [np.nan, 1, 0, np.nan, np.nan, 1, 0, 1, 0] + b = np.sort(a) + assert_equal(b, a[::-1], msg) + + with assert_raises_regex( + ValueError, + "kind` and `stable` parameters can't be provided at the same time" + ): + np.sort(a, kind="stable", stable=True) + + # all c scalar sorts use the same code with different types + # so it suffices to run a quick check with one type. The number + # of sorted items must be greater than ~50 to check the actual + # algorithm because quick and merge sort fall over to insertion + # sort for small arrays. + + @pytest.mark.parametrize('dtype', [np.uint8, np.uint16, np.uint32, np.uint64, + np.float16, np.float32, np.float64, + np.longdouble]) + def test_sort_unsigned(self, dtype): + a = np.arange(101, dtype=dtype) + b = a[::-1].copy() + for kind in self.sort_kinds: + msg = "scalar sort, kind=%s" % kind + c = a.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + c = b.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + + @pytest.mark.parametrize('dtype', + [np.int8, np.int16, np.int32, np.int64, np.float16, + np.float32, np.float64, np.longdouble]) + def test_sort_signed(self, dtype): + a = np.arange(-50, 51, dtype=dtype) + b = a[::-1].copy() + for kind in self.sort_kinds: + msg = "scalar sort, kind=%s" % (kind) + c = a.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + c = b.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + + @pytest.mark.parametrize('dtype', [np.float32, np.float64, np.longdouble]) + @pytest.mark.parametrize('part', ['real', 'imag']) + def test_sort_complex(self, part, dtype): + # test complex sorts. These use the same code as the scalars + # but the compare function differs. + cdtype = { + np.single: np.csingle, + np.double: np.cdouble, + np.longdouble: np.clongdouble, + }[dtype] + a = np.arange(-50, 51, dtype=dtype) + b = a[::-1].copy() + ai = (a * (1+1j)).astype(cdtype) + bi = (b * (1+1j)).astype(cdtype) + setattr(ai, part, 1) + setattr(bi, part, 1) + for kind in self.sort_kinds: + msg = "complex sort, %s part == 1, kind=%s" % (part, kind) + c = ai.copy() + c.sort(kind=kind) + assert_equal(c, ai, msg) + c = bi.copy() + c.sort(kind=kind) + assert_equal(c, ai, msg) + + def test_sort_complex_byte_swapping(self): + # test sorting of complex arrays requiring byte-swapping, gh-5441 + for endianness in '<>': + for dt in np.typecodes['Complex']: + arr = np.array([1+3.j, 2+2.j, 3+1.j], dtype=endianness + dt) + c = arr.copy() + c.sort() + msg = 'byte-swapped complex sort, dtype={0}'.format(dt) + assert_equal(c, arr, msg) + + @pytest.mark.parametrize('dtype', [np.bytes_, np.str_]) + def test_sort_string(self, dtype): + # np.array will perform the encoding to bytes for us in the bytes test + a = np.array(['aaaaaaaa' + chr(i) for i in range(101)], dtype=dtype) + b = a[::-1].copy() + for kind in self.sort_kinds: + msg = "kind=%s" % kind + c = a.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + c = b.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + + def test_sort_object(self): + # test object array sorts. + a = np.empty((101,), dtype=object) + a[:] = list(range(101)) + b = a[::-1] + for kind in ['q', 'h', 'm']: + msg = "kind=%s" % kind + c = a.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + c = b.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + + @pytest.mark.parametrize("dt", [ + np.dtype([('f', float), ('i', int)]), + np.dtype([('f', float), ('i', object)])]) + @pytest.mark.parametrize("step", [1, 2]) + def test_sort_structured(self, dt, step): + # test record array sorts. + a = np.array([(i, i) for i in range(101*step)], dtype=dt) + b = a[::-1] + for kind in ['q', 'h', 'm']: + msg = "kind=%s" % kind + c = a.copy()[::step] + indx = c.argsort(kind=kind) + c.sort(kind=kind) + assert_equal(c, a[::step], msg) + assert_equal(a[::step][indx], a[::step], msg) + c = b.copy()[::step] + indx = c.argsort(kind=kind) + c.sort(kind=kind) + assert_equal(c, a[step-1::step], msg) + assert_equal(b[::step][indx], a[step-1::step], msg) + + @pytest.mark.parametrize('dtype', ['datetime64[D]', 'timedelta64[D]']) + def test_sort_time(self, dtype): + # test datetime64 and timedelta64 sorts. + a = np.arange(0, 101, dtype=dtype) + b = a[::-1] + for kind in ['q', 'h', 'm']: + msg = "kind=%s" % kind + c = a.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + c = b.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + + def test_sort_axis(self): + # check axis handling. This should be the same for all type + # specific sorts, so we only check it for one type and one kind + a = np.array([[3, 2], [1, 0]]) + b = np.array([[1, 0], [3, 2]]) + c = np.array([[2, 3], [0, 1]]) + d = a.copy() + d.sort(axis=0) + assert_equal(d, b, "test sort with axis=0") + d = a.copy() + d.sort(axis=1) + assert_equal(d, c, "test sort with axis=1") + d = a.copy() + d.sort() + assert_equal(d, c, "test sort with default axis") + + def test_sort_size_0(self): + # check axis handling for multidimensional empty arrays + a = np.array([]) + a.shape = (3, 2, 1, 0) + for axis in range(-a.ndim, a.ndim): + msg = 'test empty array sort with axis={0}'.format(axis) + assert_equal(np.sort(a, axis=axis), a, msg) + msg = 'test empty array sort with axis=None' + assert_equal(np.sort(a, axis=None), a.ravel(), msg) + + def test_sort_bad_ordering(self): + # test generic class with bogus ordering, + # should not segfault. + class Boom: + def __lt__(self, other): + return True + + a = np.array([Boom()] * 100, dtype=object) + for kind in self.sort_kinds: + msg = "kind=%s" % kind + c = a.copy() + c.sort(kind=kind) + assert_equal(c, a, msg) + + def test_void_sort(self): + # gh-8210 - previously segfaulted + for i in range(4): + rand = np.random.randint(256, size=4000, dtype=np.uint8) + arr = rand.view('V4') + arr[::-1].sort() + + dt = np.dtype([('val', 'i4', (1,))]) + for i in range(4): + rand = np.random.randint(256, size=4000, dtype=np.uint8) + arr = rand.view(dt) + arr[::-1].sort() + + def test_sort_raises(self): + #gh-9404 + arr = np.array([0, datetime.now(), 1], dtype=object) + for kind in self.sort_kinds: + assert_raises(TypeError, arr.sort, kind=kind) + #gh-3879 + class Raiser: + def raises_anything(*args, **kwargs): + raise TypeError("SOMETHING ERRORED") + __eq__ = __ne__ = __lt__ = __gt__ = __ge__ = __le__ = raises_anything + arr = np.array([[Raiser(), n] for n in range(10)]).reshape(-1) + np.random.shuffle(arr) + for kind in self.sort_kinds: + assert_raises(TypeError, arr.sort, kind=kind) + + def test_sort_degraded(self): + # test degraded dataset would take minutes to run with normal qsort + d = np.arange(1000000) + do = d.copy() + x = d + # create a median of 3 killer where each median is the sorted second + # last element of the quicksort partition + while x.size > 3: + mid = x.size // 2 + x[mid], x[-2] = x[-2], x[mid] + x = x[:-2] + + assert_equal(np.sort(d), do) + assert_equal(d[np.argsort(d)], do) + + def test_copy(self): + def assert_fortran(arr): + assert_(arr.flags.fortran) + assert_(arr.flags.f_contiguous) + assert_(not arr.flags.c_contiguous) + + def assert_c(arr): + assert_(not arr.flags.fortran) + assert_(not arr.flags.f_contiguous) + assert_(arr.flags.c_contiguous) + + a = np.empty((2, 2), order='F') + # Test copying a Fortran array + assert_c(a.copy()) + assert_c(a.copy('C')) + assert_fortran(a.copy('F')) + assert_fortran(a.copy('A')) + + # Now test starting with a C array. + a = np.empty((2, 2), order='C') + assert_c(a.copy()) + assert_c(a.copy('C')) + assert_fortran(a.copy('F')) + assert_c(a.copy('A')) + + @pytest.mark.parametrize("dtype", ['O', np.int32, 'i,O']) + def test__deepcopy__(self, dtype): + # Force the entry of NULLs into array + a = np.empty(4, dtype=dtype) + ctypes.memset(a.ctypes.data, 0, a.nbytes) + + # Ensure no error is raised, see gh-21833 + b = a.__deepcopy__({}) + + a[0] = 42 + with pytest.raises(AssertionError): + assert_array_equal(a, b) + + def test__deepcopy__catches_failure(self): + class MyObj: + def __deepcopy__(self, *args, **kwargs): + raise RuntimeError + + arr = np.array([1, MyObj(), 3], dtype='O') + with pytest.raises(RuntimeError): + arr.__deepcopy__({}) + + def test_sort_order(self): + # Test sorting an array with fields + x1 = np.array([21, 32, 14]) + x2 = np.array(['my', 'first', 'name']) + x3 = np.array([3.1, 4.5, 6.2]) + r = np.rec.fromarrays([x1, x2, x3], names='id,word,number') + + r.sort(order=['id']) + assert_equal(r.id, np.array([14, 21, 32])) + assert_equal(r.word, np.array(['name', 'my', 'first'])) + assert_equal(r.number, np.array([6.2, 3.1, 4.5])) + + r.sort(order=['word']) + assert_equal(r.id, np.array([32, 21, 14])) + assert_equal(r.word, np.array(['first', 'my', 'name'])) + assert_equal(r.number, np.array([4.5, 3.1, 6.2])) + + r.sort(order=['number']) + assert_equal(r.id, np.array([21, 32, 14])) + assert_equal(r.word, np.array(['my', 'first', 'name'])) + assert_equal(r.number, np.array([3.1, 4.5, 6.2])) + + assert_raises_regex(ValueError, 'duplicate', + lambda: r.sort(order=['id', 'id'])) + + if sys.byteorder == 'little': + strtype = '>i2' + else: + strtype = '': + for dt in np.typecodes['Complex']: + arr = np.array([1+3.j, 2+2.j, 3+1.j], dtype=endianness + dt) + msg = 'byte-swapped complex argsort, dtype={0}'.format(dt) + assert_equal(arr.argsort(), + np.arange(len(arr), dtype=np.intp), msg) + + # test string argsorts. + s = 'aaaaaaaa' + a = np.array([s + chr(i) for i in range(101)]) + b = a[::-1].copy() + r = np.arange(101) + rr = r[::-1] + for kind in self.sort_kinds: + msg = "string argsort, kind=%s" % kind + assert_equal(a.copy().argsort(kind=kind), r, msg) + assert_equal(b.copy().argsort(kind=kind), rr, msg) + + # test unicode argsorts. + s = 'aaaaaaaa' + a = np.array([s + chr(i) for i in range(101)], dtype=np.str_) + b = a[::-1] + r = np.arange(101) + rr = r[::-1] + for kind in self.sort_kinds: + msg = "unicode argsort, kind=%s" % kind + assert_equal(a.copy().argsort(kind=kind), r, msg) + assert_equal(b.copy().argsort(kind=kind), rr, msg) + + # test object array argsorts. + a = np.empty((101,), dtype=object) + a[:] = list(range(101)) + b = a[::-1] + r = np.arange(101) + rr = r[::-1] + for kind in self.sort_kinds: + msg = "object argsort, kind=%s" % kind + assert_equal(a.copy().argsort(kind=kind), r, msg) + assert_equal(b.copy().argsort(kind=kind), rr, msg) + + # test structured array argsorts. + dt = np.dtype([('f', float), ('i', int)]) + a = np.array([(i, i) for i in range(101)], dtype=dt) + b = a[::-1] + r = np.arange(101) + rr = r[::-1] + for kind in self.sort_kinds: + msg = "structured array argsort, kind=%s" % kind + assert_equal(a.copy().argsort(kind=kind), r, msg) + assert_equal(b.copy().argsort(kind=kind), rr, msg) + + # test datetime64 argsorts. + a = np.arange(0, 101, dtype='datetime64[D]') + b = a[::-1] + r = np.arange(101) + rr = r[::-1] + for kind in ['q', 'h', 'm']: + msg = "datetime64 argsort, kind=%s" % kind + assert_equal(a.copy().argsort(kind=kind), r, msg) + assert_equal(b.copy().argsort(kind=kind), rr, msg) + + # test timedelta64 argsorts. + a = np.arange(0, 101, dtype='timedelta64[D]') + b = a[::-1] + r = np.arange(101) + rr = r[::-1] + for kind in ['q', 'h', 'm']: + msg = "timedelta64 argsort, kind=%s" % kind + assert_equal(a.copy().argsort(kind=kind), r, msg) + assert_equal(b.copy().argsort(kind=kind), rr, msg) + + # check axis handling. This should be the same for all type + # specific argsorts, so we only check it for one type and one kind + a = np.array([[3, 2], [1, 0]]) + b = np.array([[1, 1], [0, 0]]) + c = np.array([[1, 0], [1, 0]]) + assert_equal(a.copy().argsort(axis=0), b) + assert_equal(a.copy().argsort(axis=1), c) + assert_equal(a.copy().argsort(), c) + + # check axis handling for multidimensional empty arrays + a = np.array([]) + a.shape = (3, 2, 1, 0) + for axis in range(-a.ndim, a.ndim): + msg = 'test empty array argsort with axis={0}'.format(axis) + assert_equal(np.argsort(a, axis=axis), + np.zeros_like(a, dtype=np.intp), msg) + msg = 'test empty array argsort with axis=None' + assert_equal(np.argsort(a, axis=None), + np.zeros_like(a.ravel(), dtype=np.intp), msg) + + # check that stable argsorts are stable + r = np.arange(100) + # scalars + a = np.zeros(100) + assert_equal(a.argsort(kind='m'), r) + # complex + a = np.zeros(100, dtype=complex) + assert_equal(a.argsort(kind='m'), r) + # string + a = np.array(['aaaaaaaaa' for i in range(100)]) + assert_equal(a.argsort(kind='m'), r) + # unicode + a = np.array(['aaaaaaaaa' for i in range(100)], dtype=np.str_) + assert_equal(a.argsort(kind='m'), r) + + with assert_raises_regex( + ValueError, + "kind` and `stable` parameters can't be provided at the same time" + ): + np.argsort(a, kind="stable", stable=True) + + def test_sort_unicode_kind(self): + d = np.arange(10) + k = b'\xc3\xa4'.decode("UTF8") + assert_raises(ValueError, d.sort, kind=k) + assert_raises(ValueError, d.argsort, kind=k) + + @pytest.mark.parametrize('a', [ + np.array([0, 1, np.nan], dtype=np.float16), + np.array([0, 1, np.nan], dtype=np.float32), + np.array([0, 1, np.nan]), + ]) + def test_searchsorted_floats(self, a): + # test for floats arrays containing nans. Explicitly test + # half, single, and double precision floats to verify that + # the NaN-handling is correct. + msg = "Test real (%s) searchsorted with nans, side='l'" % a.dtype + b = a.searchsorted(a, side='left') + assert_equal(b, np.arange(3), msg) + msg = "Test real (%s) searchsorted with nans, side='r'" % a.dtype + b = a.searchsorted(a, side='right') + assert_equal(b, np.arange(1, 4), msg) + # check keyword arguments + a.searchsorted(v=1) + x = np.array([0, 1, np.nan], dtype='float32') + y = np.searchsorted(x, x[-1]) + assert_equal(y, 2) + + def test_searchsorted_complex(self): + # test for complex arrays containing nans. + # The search sorted routines use the compare functions for the + # array type, so this checks if that is consistent with the sort + # order. + # check double complex + a = np.zeros(9, dtype=np.complex128) + a.real += [0, 0, 1, 1, 0, 1, np.nan, np.nan, np.nan] + a.imag += [0, 1, 0, 1, np.nan, np.nan, 0, 1, np.nan] + msg = "Test complex searchsorted with nans, side='l'" + b = a.searchsorted(a, side='left') + assert_equal(b, np.arange(9), msg) + msg = "Test complex searchsorted with nans, side='r'" + b = a.searchsorted(a, side='right') + assert_equal(b, np.arange(1, 10), msg) + msg = "Test searchsorted with little endian, side='l'" + a = np.array([0, 128], dtype=' p[:, i]).all(), + msg="%d: %r < %r" % (i, p[:, i], p[:, i + 1:].T)) + for row in range(p.shape[0]): + self.assert_partitioned(p[row], [i]) + self.assert_partitioned(parg[row], [i]) + + p = np.partition(d0, i, axis=0, kind=k) + parg = d0[np.argpartition(d0, i, axis=0, kind=k), + np.arange(d0.shape[1])[None, :]] + aae(p[i, :], np.array([i] * d1.shape[0], dtype=dt)) + # array_less does not seem to work right + at((p[:i, :] <= p[i, :]).all(), + msg="%d: %r <= %r" % (i, p[i, :], p[:i, :])) + at((p[i + 1:, :] > p[i, :]).all(), + msg="%d: %r < %r" % (i, p[i, :], p[:, i + 1:])) + for col in range(p.shape[1]): + self.assert_partitioned(p[:, col], [i]) + self.assert_partitioned(parg[:, col], [i]) + + # check inplace + dc = d.copy() + dc.partition(i, kind=k) + assert_equal(dc, np.partition(d, i, kind=k)) + dc = d0.copy() + dc.partition(i, axis=0, kind=k) + assert_equal(dc, np.partition(d0, i, axis=0, kind=k)) + dc = d1.copy() + dc.partition(i, axis=1, kind=k) + assert_equal(dc, np.partition(d1, i, axis=1, kind=k)) + + def assert_partitioned(self, d, kth): + prev = 0 + for k in np.sort(kth): + assert_array_compare(operator.__le__, d[prev:k], d[k], + err_msg='kth %d' % k) + assert_((d[k:] >= d[k]).all(), + msg="kth %d, %r not greater equal %r" % (k, d[k:], d[k])) + prev = k + 1 + + def test_partition_iterative(self): + d = np.arange(17) + kth = (0, 1, 2, 429, 231) + assert_raises(ValueError, d.partition, kth) + assert_raises(ValueError, d.argpartition, kth) + d = np.arange(10).reshape((2, 5)) + assert_raises(ValueError, d.partition, kth, axis=0) + assert_raises(ValueError, d.partition, kth, axis=1) + assert_raises(ValueError, np.partition, d, kth, axis=1) + assert_raises(ValueError, np.partition, d, kth, axis=None) + + d = np.array([3, 4, 2, 1]) + p = np.partition(d, (0, 3)) + self.assert_partitioned(p, (0, 3)) + self.assert_partitioned(d[np.argpartition(d, (0, 3))], (0, 3)) + + assert_array_equal(p, np.partition(d, (-3, -1))) + assert_array_equal(p, d[np.argpartition(d, (-3, -1))]) + + d = np.arange(17) + np.random.shuffle(d) + d.partition(range(d.size)) + assert_array_equal(np.arange(17), d) + np.random.shuffle(d) + assert_array_equal(np.arange(17), d[d.argpartition(range(d.size))]) + + # test unsorted kth + d = np.arange(17) + np.random.shuffle(d) + keys = np.array([1, 3, 8, -2]) + np.random.shuffle(d) + p = np.partition(d, keys) + self.assert_partitioned(p, keys) + p = d[np.argpartition(d, keys)] + self.assert_partitioned(p, keys) + np.random.shuffle(keys) + assert_array_equal(np.partition(d, keys), p) + assert_array_equal(d[np.argpartition(d, keys)], p) + + # equal kth + d = np.arange(20)[::-1] + self.assert_partitioned(np.partition(d, [5]*4), [5]) + self.assert_partitioned(np.partition(d, [5]*4 + [6, 13]), + [5]*4 + [6, 13]) + self.assert_partitioned(d[np.argpartition(d, [5]*4)], [5]) + self.assert_partitioned(d[np.argpartition(d, [5]*4 + [6, 13])], + [5]*4 + [6, 13]) + + d = np.arange(12) + np.random.shuffle(d) + d1 = np.tile(np.arange(12), (4, 1)) + map(np.random.shuffle, d1) + d0 = np.transpose(d1) + + kth = (1, 6, 7, -1) + p = np.partition(d1, kth, axis=1) + pa = d1[np.arange(d1.shape[0])[:, None], + d1.argpartition(kth, axis=1)] + assert_array_equal(p, pa) + for i in range(d1.shape[0]): + self.assert_partitioned(p[i,:], kth) + p = np.partition(d0, kth, axis=0) + pa = d0[np.argpartition(d0, kth, axis=0), + np.arange(d0.shape[1])[None,:]] + assert_array_equal(p, pa) + for i in range(d0.shape[1]): + self.assert_partitioned(p[:, i], kth) + + def test_partition_cdtype(self): + d = np.array([('Galahad', 1.7, 38), ('Arthur', 1.8, 41), + ('Lancelot', 1.9, 38)], + dtype=[('name', '|S10'), ('height', ' (numpy ufunc, has_in_place_version, preferred_dtype) + ops = { + 'add': (np.add, True, float), + 'sub': (np.subtract, True, float), + 'mul': (np.multiply, True, float), + 'truediv': (np.true_divide, True, float), + 'floordiv': (np.floor_divide, True, float), + 'mod': (np.remainder, True, float), + 'divmod': (np.divmod, False, float), + 'pow': (np.power, True, int), + 'lshift': (np.left_shift, True, int), + 'rshift': (np.right_shift, True, int), + 'and': (np.bitwise_and, True, int), + 'xor': (np.bitwise_xor, True, int), + 'or': (np.bitwise_or, True, int), + 'matmul': (np.matmul, True, float), + # 'ge': (np.less_equal, False), + # 'gt': (np.less, False), + # 'le': (np.greater_equal, False), + # 'lt': (np.greater, False), + # 'eq': (np.equal, False), + # 'ne': (np.not_equal, False), + } + + class Coerced(Exception): + pass + + def array_impl(self): + raise Coerced + + def op_impl(self, other): + return "forward" + + def rop_impl(self, other): + return "reverse" + + def iop_impl(self, other): + return "in-place" + + def array_ufunc_impl(self, ufunc, method, *args, **kwargs): + return ("__array_ufunc__", ufunc, method, args, kwargs) + + # Create an object with the given base, in the given module, with a + # bunch of placeholder __op__ methods, and optionally a + # __array_ufunc__ and __array_priority__. + def make_obj(base, array_priority=False, array_ufunc=False, + alleged_module="__main__"): + class_namespace = {"__array__": array_impl} + if array_priority is not False: + class_namespace["__array_priority__"] = array_priority + for op in ops: + class_namespace["__{0}__".format(op)] = op_impl + class_namespace["__r{0}__".format(op)] = rop_impl + class_namespace["__i{0}__".format(op)] = iop_impl + if array_ufunc is not False: + class_namespace["__array_ufunc__"] = array_ufunc + eval_namespace = {"base": base, + "class_namespace": class_namespace, + "__name__": alleged_module, + } + MyType = eval("type('MyType', (base,), class_namespace)", + eval_namespace) + if issubclass(MyType, np.ndarray): + # Use this range to avoid special case weirdnesses around + # divide-by-0, pow(x, 2), overflow due to pow(big, big), etc. + return np.arange(3, 7).reshape(2, 2).view(MyType) + else: + return MyType() + + def check(obj, binop_override_expected, ufunc_override_expected, + inplace_override_expected, check_scalar=True): + for op, (ufunc, has_inplace, dtype) in ops.items(): + err_msg = ('op: %s, ufunc: %s, has_inplace: %s, dtype: %s' + % (op, ufunc, has_inplace, dtype)) + check_objs = [np.arange(3, 7, dtype=dtype).reshape(2, 2)] + if check_scalar: + check_objs.append(check_objs[0][0]) + for arr in check_objs: + arr_method = getattr(arr, "__{0}__".format(op)) + + def first_out_arg(result): + if op == "divmod": + assert_(isinstance(result, tuple)) + return result[0] + else: + return result + + # arr __op__ obj + if binop_override_expected: + assert_equal(arr_method(obj), NotImplemented, err_msg) + elif ufunc_override_expected: + assert_equal(arr_method(obj)[0], "__array_ufunc__", + err_msg) + else: + if (isinstance(obj, np.ndarray) and + (type(obj).__array_ufunc__ is + np.ndarray.__array_ufunc__)): + # __array__ gets ignored + res = first_out_arg(arr_method(obj)) + assert_(res.__class__ is obj.__class__, err_msg) + else: + assert_raises((TypeError, Coerced), + arr_method, obj, err_msg=err_msg) + # obj __op__ arr + arr_rmethod = getattr(arr, "__r{0}__".format(op)) + if ufunc_override_expected: + res = arr_rmethod(obj) + assert_equal(res[0], "__array_ufunc__", + err_msg=err_msg) + assert_equal(res[1], ufunc, err_msg=err_msg) + else: + if (isinstance(obj, np.ndarray) and + (type(obj).__array_ufunc__ is + np.ndarray.__array_ufunc__)): + # __array__ gets ignored + res = first_out_arg(arr_rmethod(obj)) + assert_(res.__class__ is obj.__class__, err_msg) + else: + # __array_ufunc__ = "asdf" creates a TypeError + assert_raises((TypeError, Coerced), + arr_rmethod, obj, err_msg=err_msg) + + # arr __iop__ obj + # array scalars don't have in-place operators + if has_inplace and isinstance(arr, np.ndarray): + arr_imethod = getattr(arr, "__i{0}__".format(op)) + if inplace_override_expected: + assert_equal(arr_method(obj), NotImplemented, + err_msg=err_msg) + elif ufunc_override_expected: + res = arr_imethod(obj) + assert_equal(res[0], "__array_ufunc__", err_msg) + assert_equal(res[1], ufunc, err_msg) + assert_(type(res[-1]["out"]) is tuple, err_msg) + assert_(res[-1]["out"][0] is arr, err_msg) + else: + if (isinstance(obj, np.ndarray) and + (type(obj).__array_ufunc__ is + np.ndarray.__array_ufunc__)): + # __array__ gets ignored + assert_(arr_imethod(obj) is arr, err_msg) + else: + assert_raises((TypeError, Coerced), + arr_imethod, obj, + err_msg=err_msg) + + op_fn = getattr(operator, op, None) + if op_fn is None: + op_fn = getattr(operator, op + "_", None) + if op_fn is None: + op_fn = getattr(builtins, op) + assert_equal(op_fn(obj, arr), "forward", err_msg) + if not isinstance(obj, np.ndarray): + if binop_override_expected: + assert_equal(op_fn(arr, obj), "reverse", err_msg) + elif ufunc_override_expected: + assert_equal(op_fn(arr, obj)[0], "__array_ufunc__", + err_msg) + if ufunc_override_expected: + assert_equal(ufunc(obj, arr)[0], "__array_ufunc__", + err_msg) + + # No array priority, no array_ufunc -> nothing called + check(make_obj(object), False, False, False) + # Negative array priority, no array_ufunc -> nothing called + # (has to be very negative, because scalar priority is -1000000.0) + check(make_obj(object, array_priority=-2**30), False, False, False) + # Positive array priority, no array_ufunc -> binops and iops only + check(make_obj(object, array_priority=1), True, False, True) + # ndarray ignores array_priority for ndarray subclasses + check(make_obj(np.ndarray, array_priority=1), False, False, False, + check_scalar=False) + # Positive array_priority and array_ufunc -> array_ufunc only + check(make_obj(object, array_priority=1, + array_ufunc=array_ufunc_impl), False, True, False) + check(make_obj(np.ndarray, array_priority=1, + array_ufunc=array_ufunc_impl), False, True, False) + # array_ufunc set to None -> defer binops only + check(make_obj(object, array_ufunc=None), True, False, False) + check(make_obj(np.ndarray, array_ufunc=None), True, False, False, + check_scalar=False) + + @pytest.mark.parametrize("priority", [None, "runtime error"]) + def test_ufunc_binop_bad_array_priority(self, priority): + # Mainly checks that this does not crash. The second array has a lower + # priority than -1 ("error value"). If the __radd__ actually exists, + # bad things can happen (I think via the scalar paths). + # In principle both of these can probably just be errors in the future. + class BadPriority: + @property + def __array_priority__(self): + if priority == "runtime error": + raise RuntimeError("RuntimeError in __array_priority__!") + return priority + + def __radd__(self, other): + return "result" + + class LowPriority(np.ndarray): + __array_priority__ = -1000 + + # Priority failure uses the same as scalars (smaller -1000). So the + # LowPriority wins with 'result' for each element (inner operation). + res = np.arange(3).view(LowPriority) + BadPriority() + assert res.shape == (3,) + assert res[0] == 'result' + + + def test_ufunc_override_normalize_signature(self): + # gh-5674 + class SomeClass: + def __array_ufunc__(self, ufunc, method, *inputs, **kw): + return kw + + a = SomeClass() + kw = np.add(a, [1]) + assert_('sig' not in kw and 'signature' not in kw) + kw = np.add(a, [1], sig='ii->i') + assert_('sig' not in kw and 'signature' in kw) + assert_equal(kw['signature'], 'ii->i') + kw = np.add(a, [1], signature='ii->i') + assert_('sig' not in kw and 'signature' in kw) + assert_equal(kw['signature'], 'ii->i') + + def test_array_ufunc_index(self): + # Check that index is set appropriately, also if only an output + # is passed on (latter is another regression tests for github bug 4753) + # This also checks implicitly that 'out' is always a tuple. + class CheckIndex: + def __array_ufunc__(self, ufunc, method, *inputs, **kw): + for i, a in enumerate(inputs): + if a is self: + return i + # calls below mean we must be in an output. + for j, a in enumerate(kw['out']): + if a is self: + return (j,) + + a = CheckIndex() + dummy = np.arange(2.) + # 1 input, 1 output + assert_equal(np.sin(a), 0) + assert_equal(np.sin(dummy, a), (0,)) + assert_equal(np.sin(dummy, out=a), (0,)) + assert_equal(np.sin(dummy, out=(a,)), (0,)) + assert_equal(np.sin(a, a), 0) + assert_equal(np.sin(a, out=a), 0) + assert_equal(np.sin(a, out=(a,)), 0) + # 1 input, 2 outputs + assert_equal(np.modf(dummy, a), (0,)) + assert_equal(np.modf(dummy, None, a), (1,)) + assert_equal(np.modf(dummy, dummy, a), (1,)) + assert_equal(np.modf(dummy, out=(a, None)), (0,)) + assert_equal(np.modf(dummy, out=(a, dummy)), (0,)) + assert_equal(np.modf(dummy, out=(None, a)), (1,)) + assert_equal(np.modf(dummy, out=(dummy, a)), (1,)) + assert_equal(np.modf(a, out=(dummy, a)), 0) + with assert_raises(TypeError): + # Out argument must be tuple, since there are multiple outputs + np.modf(dummy, out=a) + + assert_raises(ValueError, np.modf, dummy, out=(a,)) + + # 2 inputs, 1 output + assert_equal(np.add(a, dummy), 0) + assert_equal(np.add(dummy, a), 1) + assert_equal(np.add(dummy, dummy, a), (0,)) + assert_equal(np.add(dummy, a, a), 1) + assert_equal(np.add(dummy, dummy, out=a), (0,)) + assert_equal(np.add(dummy, dummy, out=(a,)), (0,)) + assert_equal(np.add(a, dummy, out=a), 0) + + def test_out_override(self): + # regression test for github bug 4753 + class OutClass(np.ndarray): + def __array_ufunc__(self, ufunc, method, *inputs, **kw): + if 'out' in kw: + tmp_kw = kw.copy() + tmp_kw.pop('out') + func = getattr(ufunc, method) + kw['out'][0][...] = func(*inputs, **tmp_kw) + + A = np.array([0]).view(OutClass) + B = np.array([5]) + C = np.array([6]) + np.multiply(C, B, A) + assert_equal(A[0], 30) + assert_(isinstance(A, OutClass)) + A[0] = 0 + np.multiply(C, B, out=A) + assert_equal(A[0], 30) + assert_(isinstance(A, OutClass)) + + def test_pow_override_with_errors(self): + # regression test for gh-9112 + class PowerOnly(np.ndarray): + def __array_ufunc__(self, ufunc, method, *inputs, **kw): + if ufunc is not np.power: + raise NotImplementedError + return "POWER!" + # explicit cast to float, to ensure the fast power path is taken. + a = np.array(5., dtype=np.float64).view(PowerOnly) + assert_equal(a ** 2.5, "POWER!") + with assert_raises(NotImplementedError): + a ** 0.5 + with assert_raises(NotImplementedError): + a ** 0 + with assert_raises(NotImplementedError): + a ** 1 + with assert_raises(NotImplementedError): + a ** -1 + with assert_raises(NotImplementedError): + a ** 2 + + def test_pow_array_object_dtype(self): + # test pow on arrays of object dtype + class SomeClass: + def __init__(self, num=None): + self.num = num + + # want to ensure a fast pow path is not taken + def __mul__(self, other): + raise AssertionError('__mul__ should not be called') + + def __div__(self, other): + raise AssertionError('__div__ should not be called') + + def __pow__(self, exp): + return SomeClass(num=self.num ** exp) + + def __eq__(self, other): + if isinstance(other, SomeClass): + return self.num == other.num + + __rpow__ = __pow__ + + def pow_for(exp, arr): + return np.array([x ** exp for x in arr]) + + obj_arr = np.array([SomeClass(1), SomeClass(2), SomeClass(3)]) + + assert_equal(obj_arr ** 0.5, pow_for(0.5, obj_arr)) + assert_equal(obj_arr ** 0, pow_for(0, obj_arr)) + assert_equal(obj_arr ** 1, pow_for(1, obj_arr)) + assert_equal(obj_arr ** -1, pow_for(-1, obj_arr)) + assert_equal(obj_arr ** 2, pow_for(2, obj_arr)) + + def test_pos_array_ufunc_override(self): + class A(np.ndarray): + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + return getattr(ufunc, method)(*[i.view(np.ndarray) for + i in inputs], **kwargs) + tst = np.array('foo').view(A) + with assert_raises(TypeError): + +tst + + +class TestTemporaryElide: + # elision is only triggered on relatively large arrays + + def test_extension_incref_elide(self): + # test extension (e.g. cython) calling PyNumber_* slots without + # increasing the reference counts + # + # def incref_elide(a): + # d = input.copy() # refcount 1 + # return d, d + d # PyNumber_Add without increasing refcount + from numpy._core._multiarray_tests import incref_elide + d = np.ones(100000) + orig, res = incref_elide(d) + d + d + # the return original should not be changed to an inplace operation + assert_array_equal(orig, d) + assert_array_equal(res, d + d) + + def test_extension_incref_elide_stack(self): + # scanning if the refcount == 1 object is on the python stack to check + # that we are called directly from python is flawed as object may still + # be above the stack pointer and we have no access to the top of it + # + # def incref_elide_l(d): + # return l[4] + l[4] # PyNumber_Add without increasing refcount + from numpy._core._multiarray_tests import incref_elide_l + # padding with 1 makes sure the object on the stack is not overwritten + l = [1, 1, 1, 1, np.ones(100000)] + res = incref_elide_l(l) + # the return original should not be changed to an inplace operation + assert_array_equal(l[4], np.ones(100000)) + assert_array_equal(res, l[4] + l[4]) + + def test_temporary_with_cast(self): + # check that we don't elide into a temporary which would need casting + d = np.ones(200000, dtype=np.int64) + r = ((d + d) + np.array(2**222, dtype='O')) + assert_equal(r.dtype, np.dtype('O')) + + r = ((d + d) / 2) + assert_equal(r.dtype, np.dtype('f8')) + + r = np.true_divide((d + d), 2) + assert_equal(r.dtype, np.dtype('f8')) + + r = ((d + d) / 2.) + assert_equal(r.dtype, np.dtype('f8')) + + r = ((d + d) // 2) + assert_equal(r.dtype, np.dtype(np.int64)) + + # commutative elision into the astype result + f = np.ones(100000, dtype=np.float32) + assert_equal(((f + f) + f.astype(np.float64)).dtype, np.dtype('f8')) + + # no elision into lower type + d = f.astype(np.float64) + assert_equal(((f + f) + d).dtype, d.dtype) + l = np.ones(100000, dtype=np.longdouble) + assert_equal(((d + d) + l).dtype, l.dtype) + + # test unary abs with different output dtype + for dt in (np.complex64, np.complex128, np.clongdouble): + c = np.ones(100000, dtype=dt) + r = abs(c * 2.0) + assert_equal(r.dtype, np.dtype('f%d' % (c.itemsize // 2))) + + def test_elide_broadcast(self): + # test no elision on broadcast to higher dimension + # only triggers elision code path in debug mode as triggering it in + # normal mode needs 256kb large matching dimension, so a lot of memory + d = np.ones((2000, 1), dtype=int) + b = np.ones((2000), dtype=bool) + r = (1 - d) + b + assert_equal(r, 1) + assert_equal(r.shape, (2000, 2000)) + + def test_elide_scalar(self): + # check inplace op does not create ndarray from scalars + a = np.bool() + assert_(type(~(a & a)) is np.bool) + + def test_elide_scalar_readonly(self): + # The imaginary part of a real array is readonly. This needs to go + # through fast_scalar_power which is only called for powers of + # +1, -1, 0, 0.5, and 2, so use 2. Also need valid refcount for + # elision which can be gotten for the imaginary part of a real + # array. Should not error. + a = np.empty(100000, dtype=np.float64) + a.imag ** 2 + + def test_elide_readonly(self): + # don't try to elide readonly temporaries + r = np.asarray(np.broadcast_to(np.zeros(1), 100000).flat) * 0.0 + assert_equal(r, 0) + + def test_elide_updateifcopy(self): + a = np.ones(2**20)[::2] + b = a.flat.__array__() + 1 + del b + assert_equal(a, 1) + + +class TestCAPI: + def test_IsPythonScalar(self): + from numpy._core._multiarray_tests import IsPythonScalar + assert_(IsPythonScalar(b'foobar')) + assert_(IsPythonScalar(1)) + assert_(IsPythonScalar(2**80)) + assert_(IsPythonScalar(2.)) + assert_(IsPythonScalar("a")) + + @pytest.mark.parametrize("converter", + [_multiarray_tests.run_scalar_intp_converter, + _multiarray_tests.run_scalar_intp_from_sequence]) + def test_intp_sequence_converters(self, converter): + # Test simple values (-1 is special for error return paths) + assert converter(10) == (10,) + assert converter(-1) == (-1,) + # A 0-D array looks a bit like a sequence but must take the integer + # path: + assert converter(np.array(123)) == (123,) + # Test simple sequences (intp_from_sequence only supports length 1): + assert converter((10,)) == (10,) + assert converter(np.array([11])) == (11,) + + @pytest.mark.parametrize("converter", + [_multiarray_tests.run_scalar_intp_converter, + _multiarray_tests.run_scalar_intp_from_sequence]) + @pytest.mark.skipif(IS_PYPY and sys.implementation.version <= (7, 3, 8), + reason="PyPy bug in error formatting") + def test_intp_sequence_converters_errors(self, converter): + with pytest.raises(TypeError, + match="expected a sequence of integers or a single integer, "): + converter(object()) + with pytest.raises(TypeError, + match="expected a sequence of integers or a single integer, " + "got '32.0'"): + converter(32.) + with pytest.raises(TypeError, + match="'float' object cannot be interpreted as an integer"): + converter([32.]) + with pytest.raises(ValueError, + match="Maximum allowed dimension"): + # These converters currently convert overflows to a ValueError + converter(2**64) + + +class TestSubscripting: + def test_test_zero_rank(self): + x = np.array([1, 2, 3]) + assert_(isinstance(x[0], np.int_)) + assert_(type(x[0, ...]) is np.ndarray) + + +class TestPickling: + @pytest.mark.skipif(pickle.HIGHEST_PROTOCOL >= 5, + reason=('this tests the error messages when trying to' + 'protocol 5 although it is not available')) + def test_correct_protocol5_error_message(self): + array = np.arange(10) + + def test_record_array_with_object_dtype(self): + my_object = object() + + arr_with_object = np.array( + [(my_object, 1, 2.0)], + dtype=[('a', object), ('b', int), ('c', float)]) + arr_without_object = np.array( + [('xxx', 1, 2.0)], + dtype=[('a', str), ('b', int), ('c', float)]) + + for proto in range(2, pickle.HIGHEST_PROTOCOL + 1): + depickled_arr_with_object = pickle.loads( + pickle.dumps(arr_with_object, protocol=proto)) + depickled_arr_without_object = pickle.loads( + pickle.dumps(arr_without_object, protocol=proto)) + + assert_equal(arr_with_object.dtype, + depickled_arr_with_object.dtype) + assert_equal(arr_without_object.dtype, + depickled_arr_without_object.dtype) + + @pytest.mark.skipif(pickle.HIGHEST_PROTOCOL < 5, + reason="requires pickle protocol 5") + def test_f_contiguous_array(self): + f_contiguous_array = np.array([[1, 2, 3], [4, 5, 6]], order='F') + buffers = [] + + # When using pickle protocol 5, Fortran-contiguous arrays can be + # serialized using out-of-band buffers + bytes_string = pickle.dumps(f_contiguous_array, protocol=5, + buffer_callback=buffers.append) + + assert len(buffers) > 0 + + depickled_f_contiguous_array = pickle.loads(bytes_string, + buffers=buffers) + + assert_equal(f_contiguous_array, depickled_f_contiguous_array) + + def test_non_contiguous_array(self): + non_contiguous_array = np.arange(12).reshape(3, 4)[:, :2] + assert not non_contiguous_array.flags.c_contiguous + assert not non_contiguous_array.flags.f_contiguous + + # make sure non-contiguous arrays can be pickled-depickled + # using any protocol + for proto in range(2, pickle.HIGHEST_PROTOCOL + 1): + depickled_non_contiguous_array = pickle.loads( + pickle.dumps(non_contiguous_array, protocol=proto)) + + assert_equal(non_contiguous_array, depickled_non_contiguous_array) + + def test_roundtrip(self): + for proto in range(2, pickle.HIGHEST_PROTOCOL + 1): + carray = np.array([[2, 9], [7, 0], [3, 8]]) + DATA = [ + carray, + np.transpose(carray), + np.array([('xxx', 1, 2.0)], dtype=[('a', (str, 3)), ('b', int), + ('c', float)]) + ] + + refs = [weakref.ref(a) for a in DATA] + for a in DATA: + assert_equal( + a, pickle.loads(pickle.dumps(a, protocol=proto)), + err_msg="%r" % a) + del a, DATA, carray + break_cycles() + # check for reference leaks (gh-12793) + for ref in refs: + assert ref() is None + + def _loads(self, obj): + return pickle.loads(obj, encoding='latin1') + + # version 0 pickles, using protocol=2 to pickle + # version 0 doesn't have a version field + def test_version0_int8(self): + s = b"\x80\x02cnumpy.core._internal\n_reconstruct\nq\x01cnumpy\nndarray\nq\x02K\x00\x85U\x01b\x87Rq\x03(K\x04\x85cnumpy\ndtype\nq\x04U\x02i1K\x00K\x01\x87Rq\x05(U\x01|NNJ\xff\xff\xff\xffJ\xff\xff\xff\xfftb\x89U\x04\x01\x02\x03\x04tb." # noqa + a = np.array([1, 2, 3, 4], dtype=np.int8) + p = self._loads(s) + assert_equal(a, p) + + def test_version0_float32(self): + s = b"\x80\x02cnumpy.core._internal\n_reconstruct\nq\x01cnumpy\nndarray\nq\x02K\x00\x85U\x01b\x87Rq\x03(K\x04\x85cnumpy\ndtype\nq\x04U\x02f4K\x00K\x01\x87Rq\x05(U\x01= g2, [g1[i] >= g2[i] for i in [0, 1, 2]]) + assert_array_equal(g1 < g2, [g1[i] < g2[i] for i in [0, 1, 2]]) + assert_array_equal(g1 > g2, [g1[i] > g2[i] for i in [0, 1, 2]]) + + def test_mixed(self): + g1 = np.array(["spam", "spa", "spammer", "and eggs"]) + g2 = "spam" + assert_array_equal(g1 == g2, [x == g2 for x in g1]) + assert_array_equal(g1 != g2, [x != g2 for x in g1]) + assert_array_equal(g1 < g2, [x < g2 for x in g1]) + assert_array_equal(g1 > g2, [x > g2 for x in g1]) + assert_array_equal(g1 <= g2, [x <= g2 for x in g1]) + assert_array_equal(g1 >= g2, [x >= g2 for x in g1]) + + def test_unicode(self): + g1 = np.array(["This", "is", "example"]) + g2 = np.array(["This", "was", "example"]) + assert_array_equal(g1 == g2, [g1[i] == g2[i] for i in [0, 1, 2]]) + assert_array_equal(g1 != g2, [g1[i] != g2[i] for i in [0, 1, 2]]) + assert_array_equal(g1 <= g2, [g1[i] <= g2[i] for i in [0, 1, 2]]) + assert_array_equal(g1 >= g2, [g1[i] >= g2[i] for i in [0, 1, 2]]) + assert_array_equal(g1 < g2, [g1[i] < g2[i] for i in [0, 1, 2]]) + assert_array_equal(g1 > g2, [g1[i] > g2[i] for i in [0, 1, 2]]) + +class TestArgmaxArgminCommon: + + sizes = [(), (3,), (3, 2), (2, 3), + (3, 3), (2, 3, 4), (4, 3, 2), + (1, 2, 3, 4), (2, 3, 4, 1), + (3, 4, 1, 2), (4, 1, 2, 3), + (64,), (128,), (256,)] + + @pytest.mark.parametrize("size, axis", itertools.chain(*[[(size, axis) + for axis in list(range(-len(size), len(size))) + [None]] + for size in sizes])) + @pytest.mark.parametrize('method', [np.argmax, np.argmin]) + def test_np_argmin_argmax_keepdims(self, size, axis, method): + + arr = np.random.normal(size=size) + + # contiguous arrays + if axis is None: + new_shape = [1 for _ in range(len(size))] + else: + new_shape = list(size) + new_shape[axis] = 1 + new_shape = tuple(new_shape) + + _res_orig = method(arr, axis=axis) + res_orig = _res_orig.reshape(new_shape) + res = method(arr, axis=axis, keepdims=True) + assert_equal(res, res_orig) + assert_(res.shape == new_shape) + outarray = np.empty(res.shape, dtype=res.dtype) + res1 = method(arr, axis=axis, out=outarray, + keepdims=True) + assert_(res1 is outarray) + assert_equal(res, outarray) + + if len(size) > 0: + wrong_shape = list(new_shape) + if axis is not None: + wrong_shape[axis] = 2 + else: + wrong_shape[0] = 2 + wrong_outarray = np.empty(wrong_shape, dtype=res.dtype) + with pytest.raises(ValueError): + method(arr.T, axis=axis, + out=wrong_outarray, keepdims=True) + + # non-contiguous arrays + if axis is None: + new_shape = [1 for _ in range(len(size))] + else: + new_shape = list(size)[::-1] + new_shape[axis] = 1 + new_shape = tuple(new_shape) + + _res_orig = method(arr.T, axis=axis) + res_orig = _res_orig.reshape(new_shape) + res = method(arr.T, axis=axis, keepdims=True) + assert_equal(res, res_orig) + assert_(res.shape == new_shape) + outarray = np.empty(new_shape[::-1], dtype=res.dtype) + outarray = outarray.T + res1 = method(arr.T, axis=axis, out=outarray, + keepdims=True) + assert_(res1 is outarray) + assert_equal(res, outarray) + + if len(size) > 0: + # one dimension lesser for non-zero sized + # array should raise an error + with pytest.raises(ValueError): + method(arr[0], axis=axis, + out=outarray, keepdims=True) + + if len(size) > 0: + wrong_shape = list(new_shape) + if axis is not None: + wrong_shape[axis] = 2 + else: + wrong_shape[0] = 2 + wrong_outarray = np.empty(wrong_shape, dtype=res.dtype) + with pytest.raises(ValueError): + method(arr.T, axis=axis, + out=wrong_outarray, keepdims=True) + + @pytest.mark.parametrize('method', ['max', 'min']) + def test_all(self, method): + a = np.random.normal(0, 1, (4, 5, 6, 7, 8)) + arg_method = getattr(a, 'arg' + method) + val_method = getattr(a, method) + for i in range(a.ndim): + a_maxmin = val_method(i) + aarg_maxmin = arg_method(i) + axes = list(range(a.ndim)) + axes.remove(i) + assert_(np.all(a_maxmin == aarg_maxmin.choose( + *a.transpose(i, *axes)))) + + @pytest.mark.parametrize('method', ['argmax', 'argmin']) + def test_output_shape(self, method): + # see also gh-616 + a = np.ones((10, 5)) + arg_method = getattr(a, method) + # Check some simple shape mismatches + out = np.ones(11, dtype=np.int_) + assert_raises(ValueError, arg_method, -1, out) + + out = np.ones((2, 5), dtype=np.int_) + assert_raises(ValueError, arg_method, -1, out) + + # these could be relaxed possibly (used to allow even the previous) + out = np.ones((1, 10), dtype=np.int_) + assert_raises(ValueError, arg_method, -1, out) + + out = np.ones(10, dtype=np.int_) + arg_method(-1, out=out) + assert_equal(out, arg_method(-1)) + + @pytest.mark.parametrize('ndim', [0, 1]) + @pytest.mark.parametrize('method', ['argmax', 'argmin']) + def test_ret_is_out(self, ndim, method): + a = np.ones((4,) + (256,)*ndim) + arg_method = getattr(a, method) + out = np.empty((256,)*ndim, dtype=np.intp) + ret = arg_method(axis=0, out=out) + assert ret is out + + @pytest.mark.parametrize('np_array, method, idx, val', + [(np.zeros, 'argmax', 5942, "as"), + (np.ones, 'argmin', 6001, "0")]) + def test_unicode(self, np_array, method, idx, val): + d = np_array(6031, dtype='= cmin)) + assert_(np.all(x <= cmax)) + + def _clip_type(self, type_group, array_max, + clip_min, clip_max, inplace=False, + expected_min=None, expected_max=None): + if expected_min is None: + expected_min = clip_min + if expected_max is None: + expected_max = clip_max + + for T in np._core.sctypes[type_group]: + if sys.byteorder == 'little': + byte_orders = ['=', '>'] + else: + byte_orders = ['<', '='] + + for byteorder in byte_orders: + dtype = np.dtype(T).newbyteorder(byteorder) + + x = (np.random.random(1000) * array_max).astype(dtype) + if inplace: + # The tests that call us pass clip_min and clip_max that + # might not fit in the destination dtype. They were written + # assuming the previous unsafe casting, which now must be + # passed explicitly to avoid a warning. + x.clip(clip_min, clip_max, x, casting='unsafe') + else: + x = x.clip(clip_min, clip_max) + byteorder = '=' + + if x.dtype.byteorder == '|': + byteorder = '|' + assert_equal(x.dtype.byteorder, byteorder) + self._check_range(x, expected_min, expected_max) + return x + + def test_basic(self): + for inplace in [False, True]: + self._clip_type( + 'float', 1024, -12.8, 100.2, inplace=inplace) + self._clip_type( + 'float', 1024, 0, 0, inplace=inplace) + + self._clip_type( + 'int', 1024, -120, 100, inplace=inplace) + self._clip_type( + 'int', 1024, 0, 0, inplace=inplace) + + self._clip_type( + 'uint', 1024, 0, 0, inplace=inplace) + self._clip_type( + 'uint', 1024, 10, 100, inplace=inplace) + + @pytest.mark.parametrize("inplace", [False, True]) + def test_int_range_error(self, inplace): + # E.g. clipping uint with negative integers fails to promote + # (changed with NEP 50 and may be adaptable) + # Similar to last check in `test_basic` + x = (np.random.random(1000) * 255).astype("uint8") + with pytest.raises(OverflowError): + x.clip(-1, 10, out=x if inplace else None) + + with pytest.raises(OverflowError): + x.clip(0, 256, out=x if inplace else None) + + def test_record_array(self): + rec = np.array([(-5, 2.0, 3.0), (5.0, 4.0, 3.0)], + dtype=[('x', '= 3)) + x = val.clip(min=3) + assert_(np.all(x >= 3)) + x = val.clip(max=4) + assert_(np.all(x <= 4)) + + def test_nan(self): + input_arr = np.array([-2., np.nan, 0.5, 3., 0.25, np.nan]) + result = input_arr.clip(-1, 1) + expected = np.array([-1., np.nan, 0.5, 1., 0.25, np.nan]) + assert_array_equal(result, expected) + + +class TestCompress: + def test_axis(self): + tgt = [[5, 6, 7, 8, 9]] + arr = np.arange(10).reshape(2, 5) + out = np.compress([0, 1], arr, axis=0) + assert_equal(out, tgt) + + tgt = [[1, 3], [6, 8]] + out = np.compress([0, 1, 0, 1, 0], arr, axis=1) + assert_equal(out, tgt) + + def test_truncate(self): + tgt = [[1], [6]] + arr = np.arange(10).reshape(2, 5) + out = np.compress([0, 1], arr, axis=1) + assert_equal(out, tgt) + + def test_flatten(self): + arr = np.arange(10).reshape(2, 5) + out = np.compress([0, 1], arr) + assert_equal(out, 1) + + +class TestPutmask: + def tst_basic(self, x, T, mask, val): + np.putmask(x, mask, val) + assert_equal(x[mask], np.array(val, T)) + + def test_ip_types(self): + unchecked_types = [bytes, str, np.void] + + x = np.random.random(1000)*100 + mask = x < 40 + + for val in [-100, 0, 15]: + for types in np._core.sctypes.values(): + for T in types: + if T not in unchecked_types: + if val < 0 and np.dtype(T).kind == "u": + val = np.iinfo(T).max - 99 + self.tst_basic(x.copy().astype(T), T, mask, val) + + # Also test string of a length which uses an untypical length + dt = np.dtype("S3") + self.tst_basic(x.astype(dt), dt.type, mask, dt.type(val)[:3]) + + def test_mask_size(self): + assert_raises(ValueError, np.putmask, np.array([1, 2, 3]), [True], 5) + + @pytest.mark.parametrize('dtype', ('>i4', 'f8'), ('z', '= 2, 3) + + def test_kwargs(self): + x = np.array([0, 0]) + np.putmask(x, [0, 1], [-1, -2]) + assert_array_equal(x, [0, -2]) + + x = np.array([0, 0]) + np.putmask(x, mask=[0, 1], values=[-1, -2]) + assert_array_equal(x, [0, -2]) + + x = np.array([0, 0]) + np.putmask(x, values=[-1, -2], mask=[0, 1]) + assert_array_equal(x, [0, -2]) + + with pytest.raises(TypeError): + np.putmask(a=x, values=[-1, -2], mask=[0, 1]) + + +class TestTake: + def tst_basic(self, x): + ind = list(range(x.shape[0])) + assert_array_equal(x.take(ind, axis=0), x) + + def test_ip_types(self): + unchecked_types = [bytes, str, np.void] + + x = np.random.random(24)*100 + x.shape = 2, 3, 4 + for types in np._core.sctypes.values(): + for T in types: + if T not in unchecked_types: + self.tst_basic(x.copy().astype(T)) + + # Also test string of a length which uses an untypical length + self.tst_basic(x.astype("S3")) + + def test_raise(self): + x = np.random.random(24)*100 + x.shape = 2, 3, 4 + assert_raises(IndexError, x.take, [0, 1, 2], axis=0) + assert_raises(IndexError, x.take, [-3], axis=0) + assert_array_equal(x.take([-1], axis=0)[0], x[1]) + + def test_clip(self): + x = np.random.random(24)*100 + x.shape = 2, 3, 4 + assert_array_equal(x.take([-1], axis=0, mode='clip')[0], x[0]) + assert_array_equal(x.take([2], axis=0, mode='clip')[0], x[1]) + + def test_wrap(self): + x = np.random.random(24)*100 + x.shape = 2, 3, 4 + assert_array_equal(x.take([-1], axis=0, mode='wrap')[0], x[1]) + assert_array_equal(x.take([2], axis=0, mode='wrap')[0], x[0]) + assert_array_equal(x.take([3], axis=0, mode='wrap')[0], x[1]) + + @pytest.mark.parametrize('dtype', ('>i4', 'f8'), ('z', ' 16MB + d = np.zeros(4 * 1024 ** 2) + d.tofile(tmp_filename) + assert_equal(os.path.getsize(tmp_filename), d.nbytes) + assert_array_equal(d, np.fromfile(tmp_filename)) + # check offset + with open(tmp_filename, "r+b") as f: + f.seek(d.nbytes) + d.tofile(f) + assert_equal(os.path.getsize(tmp_filename), d.nbytes * 2) + # check append mode (gh-8329) + open(tmp_filename, "w").close() # delete file contents + with open(tmp_filename, "ab") as f: + d.tofile(f) + assert_array_equal(d, np.fromfile(tmp_filename)) + with open(tmp_filename, "ab") as f: + d.tofile(f) + assert_equal(os.path.getsize(tmp_filename), d.nbytes * 2) + + def test_io_open_buffered_fromfile(self, x, tmp_filename): + # gh-6632 + x.tofile(tmp_filename) + with open(tmp_filename, 'rb', buffering=-1) as f: + y = np.fromfile(f, dtype=x.dtype) + assert_array_equal(y, x.flat) + + def test_file_position_after_fromfile(self, tmp_filename): + # gh-4118 + sizes = [io.DEFAULT_BUFFER_SIZE//8, + io.DEFAULT_BUFFER_SIZE, + io.DEFAULT_BUFFER_SIZE*8] + + for size in sizes: + with open(tmp_filename, 'wb') as f: + f.seek(size-1) + f.write(b'\0') + + for mode in ['rb', 'r+b']: + err_msg = "%d %s" % (size, mode) + + with open(tmp_filename, mode) as f: + f.read(2) + np.fromfile(f, dtype=np.float64, count=1) + pos = f.tell() + assert_equal(pos, 10, err_msg=err_msg) + + def test_file_position_after_tofile(self, tmp_filename): + # gh-4118 + sizes = [io.DEFAULT_BUFFER_SIZE//8, + io.DEFAULT_BUFFER_SIZE, + io.DEFAULT_BUFFER_SIZE*8] + + for size in sizes: + err_msg = "%d" % (size,) + + with open(tmp_filename, 'wb') as f: + f.seek(size-1) + f.write(b'\0') + f.seek(10) + f.write(b'12') + np.array([0], dtype=np.float64).tofile(f) + pos = f.tell() + assert_equal(pos, 10 + 2 + 8, err_msg=err_msg) + + with open(tmp_filename, 'r+b') as f: + f.read(2) + f.seek(0, 1) # seek between read&write required by ANSI C + np.array([0], dtype=np.float64).tofile(f) + pos = f.tell() + assert_equal(pos, 10, err_msg=err_msg) + + def test_load_object_array_fromfile(self, tmp_filename): + # gh-12300 + with open(tmp_filename, 'w') as f: + # Ensure we have a file with consistent contents + pass + + with open(tmp_filename, 'rb') as f: + assert_raises_regex(ValueError, "Cannot read into object array", + np.fromfile, f, dtype=object) + + assert_raises_regex(ValueError, "Cannot read into object array", + np.fromfile, tmp_filename, dtype=object) + + def test_fromfile_offset(self, x, tmp_filename): + with open(tmp_filename, 'wb') as f: + x.tofile(f) + + with open(tmp_filename, 'rb') as f: + y = np.fromfile(f, dtype=x.dtype, offset=0) + assert_array_equal(y, x.flat) + + with open(tmp_filename, 'rb') as f: + count_items = len(x.flat) // 8 + offset_items = len(x.flat) // 4 + offset_bytes = x.dtype.itemsize * offset_items + y = np.fromfile( + f, dtype=x.dtype, count=count_items, offset=offset_bytes + ) + assert_array_equal( + y, x.flat[offset_items:offset_items+count_items] + ) + + # subsequent seeks should stack + offset_bytes = x.dtype.itemsize + z = np.fromfile(f, dtype=x.dtype, offset=offset_bytes) + assert_array_equal(z, x.flat[offset_items+count_items+1:]) + + with open(tmp_filename, 'wb') as f: + x.tofile(f, sep=",") + + with open(tmp_filename, 'rb') as f: + assert_raises_regex( + TypeError, + "'offset' argument only permitted for binary files", + np.fromfile, tmp_filename, dtype=x.dtype, + sep=",", offset=1) + + @pytest.mark.skipif(IS_PYPY, reason="bug in PyPy's PyNumber_AsSsize_t") + def test_fromfile_bad_dup(self, x, tmp_filename): + def dup_str(fd): + return 'abc' + + def dup_bigint(fd): + return 2**68 + + old_dup = os.dup + try: + with open(tmp_filename, 'wb') as f: + x.tofile(f) + for dup, exc in ((dup_str, TypeError), (dup_bigint, OSError)): + os.dup = dup + assert_raises(exc, np.fromfile, f) + finally: + os.dup = old_dup + + def _check_from(self, s, value, filename, **kw): + if 'sep' not in kw: + y = np.frombuffer(s, **kw) + else: + y = np.fromstring(s, **kw) + assert_array_equal(y, value) + + with open(filename, 'wb') as f: + f.write(s) + y = np.fromfile(filename, **kw) + assert_array_equal(y, value) + + @pytest.fixture(params=["period", "comma"]) + def decimal_sep_localization(self, request): + """ + Including this fixture in a test will automatically + execute it with both types of decimal separator. + + So:: + + def test_decimal(decimal_sep_localization): + pass + + is equivalent to the following two tests:: + + def test_decimal_period_separator(): + pass + + def test_decimal_comma_separator(): + with CommaDecimalPointLocale(): + pass + """ + if request.param == "period": + yield + elif request.param == "comma": + with CommaDecimalPointLocale(): + yield + else: + assert False, request.param + + def test_nan(self, tmp_filename, decimal_sep_localization): + self._check_from( + b"nan +nan -nan NaN nan(foo) +NaN(BAR) -NAN(q_u_u_x_)", + [np.nan, np.nan, np.nan, np.nan, np.nan, np.nan, np.nan], + tmp_filename, + sep=' ') + + def test_inf(self, tmp_filename, decimal_sep_localization): + self._check_from( + b"inf +inf -inf infinity -Infinity iNfInItY -inF", + [np.inf, np.inf, -np.inf, np.inf, -np.inf, np.inf, -np.inf], + tmp_filename, + sep=' ') + + def test_numbers(self, tmp_filename, decimal_sep_localization): + self._check_from( + b"1.234 -1.234 .3 .3e55 -123133.1231e+133", + [1.234, -1.234, .3, .3e55, -123133.1231e+133], + tmp_filename, + sep=' ') + + def test_binary(self, tmp_filename): + self._check_from( + b'\x00\x00\x80?\x00\x00\x00@\x00\x00@@\x00\x00\x80@', + np.array([1, 2, 3, 4]), + tmp_filename, + dtype='']) + @pytest.mark.parametrize('dtype', [float, int, complex]) + def test_basic(self, byteorder, dtype): + dt = np.dtype(dtype).newbyteorder(byteorder) + x = (np.random.random((4, 7)) * 5).astype(dt) + buf = x.tobytes() + assert_array_equal(np.frombuffer(buf, dtype=dt), x.flat) + + @pytest.mark.parametrize("obj", [np.arange(10), b"12345678"]) + def test_array_base(self, obj): + # Objects (including NumPy arrays), which do not use the + # `release_buffer` slot should be directly used as a base object. + # See also gh-21612 + new = np.frombuffer(obj) + assert new.base is obj + + def test_empty(self): + assert_array_equal(np.frombuffer(b''), np.array([])) + + @pytest.mark.skipif(IS_PYPY, + reason="PyPy's memoryview currently does not track exports. See: " + "https://foss.heptapod.net/pypy/pypy/-/issues/3724") + def test_mmap_close(self): + # The old buffer protocol was not safe for some things that the new + # one is. But `frombuffer` always used the old one for a long time. + # Checks that it is safe with the new one (using memoryviews) + with tempfile.TemporaryFile(mode='wb') as tmp: + tmp.write(b"asdf") + tmp.flush() + mm = mmap.mmap(tmp.fileno(), 0) + arr = np.frombuffer(mm, dtype=np.uint8) + with pytest.raises(BufferError): + mm.close() # cannot close while array uses the buffer + del arr + mm.close() + +class TestFlat: + def setup_method(self): + a0 = np.arange(20.0) + a = a0.reshape(4, 5) + a0.shape = (4, 5) + a.flags.writeable = False + self.a = a + self.b = a[::2, ::2] + self.a0 = a0 + self.b0 = a0[::2, ::2] + + def test_contiguous(self): + testpassed = False + try: + self.a.flat[12] = 100.0 + except ValueError: + testpassed = True + assert_(testpassed) + assert_(self.a.flat[12] == 12.0) + + def test_discontiguous(self): + testpassed = False + try: + self.b.flat[4] = 100.0 + except ValueError: + testpassed = True + assert_(testpassed) + assert_(self.b.flat[4] == 12.0) + + def test___array__(self): + c = self.a.flat.__array__() + d = self.b.flat.__array__() + e = self.a0.flat.__array__() + f = self.b0.flat.__array__() + + assert_(c.flags.writeable is False) + assert_(d.flags.writeable is False) + assert_(e.flags.writeable is True) + assert_(f.flags.writeable is False) + assert_(c.flags.writebackifcopy is False) + assert_(d.flags.writebackifcopy is False) + assert_(e.flags.writebackifcopy is False) + assert_(f.flags.writebackifcopy is False) + + @pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") + def test_refcount(self): + # includes regression test for reference count error gh-13165 + inds = [np.intp(0), np.array([True]*self.a.size), np.array([0]), None] + indtype = np.dtype(np.intp) + rc_indtype = sys.getrefcount(indtype) + for ind in inds: + rc_ind = sys.getrefcount(ind) + for _ in range(100): + try: + self.a.flat[ind] + except IndexError: + pass + assert_(abs(sys.getrefcount(ind) - rc_ind) < 50) + assert_(abs(sys.getrefcount(indtype) - rc_indtype) < 50) + + def test_index_getset(self): + it = np.arange(10).reshape(2, 1, 5).flat + with pytest.raises(AttributeError): + it.index = 10 + + for _ in it: + pass + # Check the value of `.index` is updated correctly (see also gh-19153) + # If the type was incorrect, this would show up on big-endian machines + assert it.index == it.base.size + + def test_maxdims(self): + # The flat iterator and thus attribute is currently unfortunately + # limited to only 32 dimensions (after bumping it to 64 for 2.0) + a = np.ones((1,) * 64) + + with pytest.raises(RuntimeError, + match=".*32 dimensions but the array has 64"): + a.flat + + +class TestResize: + + @_no_tracing + def test_basic(self): + x = np.array([[1, 0, 0], [0, 1, 0], [0, 0, 1]]) + if IS_PYPY: + x.resize((5, 5), refcheck=False) + else: + x.resize((5, 5)) + assert_array_equal(x.flat[:9], + np.array([[1, 0, 0], [0, 1, 0], [0, 0, 1]]).flat) + assert_array_equal(x[9:].flat, 0) + + def test_check_reference(self): + x = np.array([[1, 0, 0], [0, 1, 0], [0, 0, 1]]) + y = x + assert_raises(ValueError, x.resize, (5, 1)) + del y # avoid pyflakes unused variable warning. + + @_no_tracing + def test_int_shape(self): + x = np.eye(3) + if IS_PYPY: + x.resize(3, refcheck=False) + else: + x.resize(3) + assert_array_equal(x, np.eye(3)[0,:]) + + def test_none_shape(self): + x = np.eye(3) + x.resize(None) + assert_array_equal(x, np.eye(3)) + x.resize() + assert_array_equal(x, np.eye(3)) + + def test_0d_shape(self): + # to it multiple times to test it does not break alloc cache gh-9216 + for i in range(10): + x = np.empty((1,)) + x.resize(()) + assert_equal(x.shape, ()) + assert_equal(x.size, 1) + x = np.empty(()) + x.resize((1,)) + assert_equal(x.shape, (1,)) + assert_equal(x.size, 1) + + def test_invalid_arguments(self): + assert_raises(TypeError, np.eye(3).resize, 'hi') + assert_raises(ValueError, np.eye(3).resize, -1) + assert_raises(TypeError, np.eye(3).resize, order=1) + assert_raises(TypeError, np.eye(3).resize, refcheck='hi') + + @_no_tracing + def test_freeform_shape(self): + x = np.eye(3) + if IS_PYPY: + x.resize(3, 2, 1, refcheck=False) + else: + x.resize(3, 2, 1) + assert_(x.shape == (3, 2, 1)) + + @_no_tracing + def test_zeros_appended(self): + x = np.eye(3) + if IS_PYPY: + x.resize(2, 3, 3, refcheck=False) + else: + x.resize(2, 3, 3) + assert_array_equal(x[0], np.eye(3)) + assert_array_equal(x[1], np.zeros((3, 3))) + + @_no_tracing + def test_obj_obj(self): + # check memory is initialized on resize, gh-4857 + a = np.ones(10, dtype=[('k', object, 2)]) + if IS_PYPY: + a.resize(15, refcheck=False) + else: + a.resize(15,) + assert_equal(a.shape, (15,)) + assert_array_equal(a['k'][-5:], 0) + assert_array_equal(a['k'][:-5], 1) + + def test_empty_view(self): + # check that sizes containing a zero don't trigger a reallocate for + # already empty arrays + x = np.zeros((10, 0), int) + x_view = x[...] + x_view.resize((0, 10)) + x_view.resize((0, 100)) + + def test_check_weakref(self): + x = np.array([[1, 0, 0], [0, 1, 0], [0, 0, 1]]) + xref = weakref.ref(x) + assert_raises(ValueError, x.resize, (5, 1)) + del xref # avoid pyflakes unused variable warning. + + +class TestRecord: + def test_field_rename(self): + dt = np.dtype([('f', float), ('i', int)]) + dt.names = ['p', 'q'] + assert_equal(dt.names, ['p', 'q']) + + def test_multiple_field_name_occurrence(self): + def test_dtype_init(): + np.dtype([("A", "f8"), ("B", "f8"), ("A", "f8")]) + + # Error raised when multiple fields have the same name + assert_raises(ValueError, test_dtype_init) + + def test_bytes_fields(self): + # Bytes are not allowed in field names and not recognized in titles + # on Py3 + assert_raises(TypeError, np.dtype, [(b'a', int)]) + assert_raises(TypeError, np.dtype, [(('b', b'a'), int)]) + + dt = np.dtype([((b'a', 'b'), int)]) + assert_raises(TypeError, dt.__getitem__, b'a') + + x = np.array([(1,), (2,), (3,)], dtype=dt) + assert_raises(IndexError, x.__getitem__, b'a') + + y = x[0] + assert_raises(IndexError, y.__getitem__, b'a') + + def test_multiple_field_name_unicode(self): + def test_dtype_unicode(): + np.dtype([("\u20B9", "f8"), ("B", "f8"), ("\u20B9", "f8")]) + + # Error raised when multiple fields have the same name(unicode included) + assert_raises(ValueError, test_dtype_unicode) + + def test_fromarrays_unicode(self): + # A single name string provided to fromarrays() is allowed to be unicode + # on both Python 2 and 3: + x = np._core.records.fromarrays( + [[0], [1]], names='a,b', formats='i4,i4') + assert_equal(x['a'][0], 0) + assert_equal(x['b'][0], 1) + + def test_unicode_order(self): + # Test that we can sort with order as a unicode field name in both Python 2 and + # 3: + name = 'b' + x = np.array([1, 3, 2], dtype=[(name, int)]) + x.sort(order=name) + assert_equal(x['b'], np.array([1, 2, 3])) + + def test_field_names(self): + # Test unicode and 8-bit / byte strings can be used + a = np.zeros((1,), dtype=[('f1', 'i4'), + ('f2', 'i4'), + ('f3', [('sf1', 'i4')])]) + # byte string indexing fails gracefully + assert_raises(IndexError, a.__setitem__, b'f1', 1) + assert_raises(IndexError, a.__getitem__, b'f1') + assert_raises(IndexError, a['f1'].__setitem__, b'sf1', 1) + assert_raises(IndexError, a['f1'].__getitem__, b'sf1') + b = a.copy() + fn1 = str('f1') + b[fn1] = 1 + assert_equal(b[fn1], 1) + fnn = str('not at all') + assert_raises(ValueError, b.__setitem__, fnn, 1) + assert_raises(ValueError, b.__getitem__, fnn) + b[0][fn1] = 2 + assert_equal(b[fn1], 2) + # Subfield + assert_raises(ValueError, b[0].__setitem__, fnn, 1) + assert_raises(ValueError, b[0].__getitem__, fnn) + # Subfield + fn3 = str('f3') + sfn1 = str('sf1') + b[fn3][sfn1] = 1 + assert_equal(b[fn3][sfn1], 1) + assert_raises(ValueError, b[fn3].__setitem__, fnn, 1) + assert_raises(ValueError, b[fn3].__getitem__, fnn) + # multiple subfields + fn2 = str('f2') + b[fn2] = 3 + + assert_equal(b[['f1', 'f2']][0].tolist(), (2, 3)) + assert_equal(b[['f2', 'f1']][0].tolist(), (3, 2)) + assert_equal(b[['f1', 'f3']][0].tolist(), (2, (1,))) + + # non-ascii unicode field indexing is well behaved + assert_raises(ValueError, a.__setitem__, '\u03e0', 1) + assert_raises(ValueError, a.__getitem__, '\u03e0') + + def test_record_hash(self): + a = np.array([(1, 2), (1, 2)], dtype='i1,i2') + a.flags.writeable = False + b = np.array([(1, 2), (3, 4)], dtype=[('num1', 'i1'), ('num2', 'i2')]) + b.flags.writeable = False + c = np.array([(1, 2), (3, 4)], dtype='i1,i2') + c.flags.writeable = False + assert_(hash(a[0]) == hash(a[1])) + assert_(hash(a[0]) == hash(b[0])) + assert_(hash(a[0]) != hash(b[1])) + assert_(hash(c[0]) == hash(a[0]) and c[0] == a[0]) + + def test_record_no_hash(self): + a = np.array([(1, 2), (1, 2)], dtype='i1,i2') + assert_raises(TypeError, hash, a[0]) + + def test_empty_structure_creation(self): + # make sure these do not raise errors (gh-5631) + np.array([()], dtype={'names': [], 'formats': [], + 'offsets': [], 'itemsize': 12}) + np.array([(), (), (), (), ()], dtype={'names': [], 'formats': [], + 'offsets': [], 'itemsize': 12}) + + def test_multifield_indexing_view(self): + a = np.ones(3, dtype=[('a', 'i4'), ('b', 'f4'), ('c', 'u4')]) + v = a[['a', 'c']] + assert_(v.base is a) + assert_(v.dtype == np.dtype({'names': ['a', 'c'], + 'formats': ['i4', 'u4'], + 'offsets': [0, 8]})) + v[:] = (4,5) + assert_equal(a[0].item(), (4, 1, 5)) + +class TestView: + def test_basic(self): + x = np.array([(1, 2, 3, 4), (5, 6, 7, 8)], + dtype=[('r', np.int8), ('g', np.int8), + ('b', np.int8), ('a', np.int8)]) + # We must be specific about the endianness here: + y = x.view(dtype=' 0) + assert_(issubclass(w[0].category, RuntimeWarning)) + + def test_empty(self): + A = np.zeros((0, 3)) + for f in self.funcs: + for axis in [0, None]: + with warnings.catch_warnings(record=True) as w: + warnings.simplefilter('always') + assert_(np.isnan(f(A, axis=axis)).all()) + assert_(len(w) > 0) + assert_(issubclass(w[0].category, RuntimeWarning)) + for axis in [1]: + with warnings.catch_warnings(record=True) as w: + warnings.simplefilter('always') + assert_equal(f(A, axis=axis), np.zeros([])) + + def test_mean_values(self): + for mat in [self.rmat, self.cmat, self.omat]: + for axis in [0, 1]: + tgt = mat.sum(axis=axis) + res = _mean(mat, axis=axis) * mat.shape[axis] + assert_almost_equal(res, tgt) + for axis in [None]: + tgt = mat.sum(axis=axis) + res = _mean(mat, axis=axis) * np.prod(mat.shape) + assert_almost_equal(res, tgt) + + def test_mean_float16(self): + # This fail if the sum inside mean is done in float16 instead + # of float32. + assert_(_mean(np.ones(100000, dtype='float16')) == 1) + + def test_mean_axis_error(self): + # Ensure that AxisError is raised instead of IndexError when axis is + # out of bounds, see gh-15817. + with assert_raises(np.exceptions.AxisError): + np.arange(10).mean(axis=2) + + def test_mean_where(self): + a = np.arange(16).reshape((4, 4)) + wh_full = np.array([[False, True, False, True], + [True, False, True, False], + [True, True, False, False], + [False, False, True, True]]) + wh_partial = np.array([[False], + [True], + [True], + [False]]) + _cases = [(1, True, [1.5, 5.5, 9.5, 13.5]), + (0, wh_full, [6., 5., 10., 9.]), + (1, wh_full, [2., 5., 8.5, 14.5]), + (0, wh_partial, [6., 7., 8., 9.])] + for _ax, _wh, _res in _cases: + assert_allclose(a.mean(axis=_ax, where=_wh), + np.array(_res)) + assert_allclose(np.mean(a, axis=_ax, where=_wh), + np.array(_res)) + + a3d = np.arange(16).reshape((2, 2, 4)) + _wh_partial = np.array([False, True, True, False]) + _res = [[1.5, 5.5], [9.5, 13.5]] + assert_allclose(a3d.mean(axis=2, where=_wh_partial), + np.array(_res)) + assert_allclose(np.mean(a3d, axis=2, where=_wh_partial), + np.array(_res)) + + with pytest.warns(RuntimeWarning) as w: + assert_allclose(a.mean(axis=1, where=wh_partial), + np.array([np.nan, 5.5, 9.5, np.nan])) + with pytest.warns(RuntimeWarning) as w: + assert_equal(a.mean(where=False), np.nan) + with pytest.warns(RuntimeWarning) as w: + assert_equal(np.mean(a, where=False), np.nan) + + def test_var_values(self): + for mat in [self.rmat, self.cmat, self.omat]: + for axis in [0, 1, None]: + msqr = _mean(mat * mat.conj(), axis=axis) + mean = _mean(mat, axis=axis) + tgt = msqr - mean * mean.conjugate() + res = _var(mat, axis=axis) + assert_almost_equal(res, tgt) + + @pytest.mark.parametrize(('complex_dtype', 'ndec'), ( + ('complex64', 6), + ('complex128', 7), + ('clongdouble', 7), + )) + def test_var_complex_values(self, complex_dtype, ndec): + # Test fast-paths for every builtin complex type + for axis in [0, 1, None]: + mat = self.cmat.copy().astype(complex_dtype) + msqr = _mean(mat * mat.conj(), axis=axis) + mean = _mean(mat, axis=axis) + tgt = msqr - mean * mean.conjugate() + res = _var(mat, axis=axis) + assert_almost_equal(res, tgt, decimal=ndec) + + def test_var_dimensions(self): + # _var paths for complex number introduce additions on views that + # increase dimensions. Ensure this generalizes to higher dims + mat = np.stack([self.cmat]*3) + for axis in [0, 1, 2, -1, None]: + msqr = _mean(mat * mat.conj(), axis=axis) + mean = _mean(mat, axis=axis) + tgt = msqr - mean * mean.conjugate() + res = _var(mat, axis=axis) + assert_almost_equal(res, tgt) + + def test_var_complex_byteorder(self): + # Test that var fast-path does not cause failures for complex arrays + # with non-native byteorder + cmat = self.cmat.copy().astype('complex128') + cmat_swapped = cmat.astype(cmat.dtype.newbyteorder()) + assert_almost_equal(cmat.var(), cmat_swapped.var()) + + def test_var_axis_error(self): + # Ensure that AxisError is raised instead of IndexError when axis is + # out of bounds, see gh-15817. + with assert_raises(np.exceptions.AxisError): + np.arange(10).var(axis=2) + + def test_var_where(self): + a = np.arange(25).reshape((5, 5)) + wh_full = np.array([[False, True, False, True, True], + [True, False, True, True, False], + [True, True, False, False, True], + [False, True, True, False, True], + [True, False, True, True, False]]) + wh_partial = np.array([[False], + [True], + [True], + [False], + [True]]) + _cases = [(0, True, [50., 50., 50., 50., 50.]), + (1, True, [2., 2., 2., 2., 2.])] + for _ax, _wh, _res in _cases: + assert_allclose(a.var(axis=_ax, where=_wh), + np.array(_res)) + assert_allclose(np.var(a, axis=_ax, where=_wh), + np.array(_res)) + + a3d = np.arange(16).reshape((2, 2, 4)) + _wh_partial = np.array([False, True, True, False]) + _res = [[0.25, 0.25], [0.25, 0.25]] + assert_allclose(a3d.var(axis=2, where=_wh_partial), + np.array(_res)) + assert_allclose(np.var(a3d, axis=2, where=_wh_partial), + np.array(_res)) + + assert_allclose(np.var(a, axis=1, where=wh_full), + np.var(a[wh_full].reshape((5, 3)), axis=1)) + assert_allclose(np.var(a, axis=0, where=wh_partial), + np.var(a[wh_partial[:,0]], axis=0)) + with pytest.warns(RuntimeWarning) as w: + assert_equal(a.var(where=False), np.nan) + with pytest.warns(RuntimeWarning) as w: + assert_equal(np.var(a, where=False), np.nan) + + def test_std_values(self): + for mat in [self.rmat, self.cmat, self.omat]: + for axis in [0, 1, None]: + tgt = np.sqrt(_var(mat, axis=axis)) + res = _std(mat, axis=axis) + assert_almost_equal(res, tgt) + + def test_std_where(self): + a = np.arange(25).reshape((5,5))[::-1] + whf = np.array([[False, True, False, True, True], + [True, False, True, False, True], + [True, True, False, True, False], + [True, False, True, True, False], + [False, True, False, True, True]]) + whp = np.array([[False], + [False], + [True], + [True], + [False]]) + _cases = [ + (0, True, 7.07106781*np.ones((5))), + (1, True, 1.41421356*np.ones((5))), + (0, whf, + np.array([4.0824829 , 8.16496581, 5., 7.39509973, 8.49836586])), + (0, whp, 2.5*np.ones((5))) + ] + for _ax, _wh, _res in _cases: + assert_allclose(a.std(axis=_ax, where=_wh), _res) + assert_allclose(np.std(a, axis=_ax, where=_wh), _res) + + a3d = np.arange(16).reshape((2, 2, 4)) + _wh_partial = np.array([False, True, True, False]) + _res = [[0.5, 0.5], [0.5, 0.5]] + assert_allclose(a3d.std(axis=2, where=_wh_partial), + np.array(_res)) + assert_allclose(np.std(a3d, axis=2, where=_wh_partial), + np.array(_res)) + + assert_allclose(a.std(axis=1, where=whf), + np.std(a[whf].reshape((5,3)), axis=1)) + assert_allclose(np.std(a, axis=1, where=whf), + (a[whf].reshape((5,3))).std(axis=1)) + assert_allclose(a.std(axis=0, where=whp), + np.std(a[whp[:,0]], axis=0)) + assert_allclose(np.std(a, axis=0, where=whp), + (a[whp[:,0]]).std(axis=0)) + with pytest.warns(RuntimeWarning) as w: + assert_equal(a.std(where=False), np.nan) + with pytest.warns(RuntimeWarning) as w: + assert_equal(np.std(a, where=False), np.nan) + + def test_subclass(self): + class TestArray(np.ndarray): + def __new__(cls, data, info): + result = np.array(data) + result = result.view(cls) + result.info = info + return result + + def __array_finalize__(self, obj): + self.info = getattr(obj, "info", '') + + dat = TestArray([[1, 2, 3, 4], [5, 6, 7, 8]], 'jubba') + res = dat.mean(1) + assert_(res.info == dat.info) + res = dat.std(1) + assert_(res.info == dat.info) + res = dat.var(1) + assert_(res.info == dat.info) + + +class TestVdot: + def test_basic(self): + dt_numeric = np.typecodes['AllFloat'] + np.typecodes['AllInteger'] + dt_complex = np.typecodes['Complex'] + + # test real + a = np.eye(3) + for dt in dt_numeric + 'O': + b = a.astype(dt) + res = np.vdot(b, b) + assert_(np.isscalar(res)) + assert_equal(np.vdot(b, b), 3) + + # test complex + a = np.eye(3) * 1j + for dt in dt_complex + 'O': + b = a.astype(dt) + res = np.vdot(b, b) + assert_(np.isscalar(res)) + assert_equal(np.vdot(b, b), 3) + + # test boolean + b = np.eye(3, dtype=bool) + res = np.vdot(b, b) + assert_(np.isscalar(res)) + assert_equal(np.vdot(b, b), True) + + def test_vdot_array_order(self): + a = np.array([[1, 2], [3, 4]], order='C') + b = np.array([[1, 2], [3, 4]], order='F') + res = np.vdot(a, a) + + # integer arrays are exact + assert_equal(np.vdot(a, b), res) + assert_equal(np.vdot(b, a), res) + assert_equal(np.vdot(b, b), res) + + def test_vdot_uncontiguous(self): + for size in [2, 1000]: + # Different sizes match different branches in vdot. + a = np.zeros((size, 2, 2)) + b = np.zeros((size, 2, 2)) + a[:, 0, 0] = np.arange(size) + b[:, 0, 0] = np.arange(size) + 1 + # Make a and b uncontiguous: + a = a[..., 0] + b = b[..., 0] + + assert_equal(np.vdot(a, b), + np.vdot(a.flatten(), b.flatten())) + assert_equal(np.vdot(a, b.copy()), + np.vdot(a.flatten(), b.flatten())) + assert_equal(np.vdot(a.copy(), b), + np.vdot(a.flatten(), b.flatten())) + assert_equal(np.vdot(a.copy('F'), b), + np.vdot(a.flatten(), b.flatten())) + assert_equal(np.vdot(a, b.copy('F')), + np.vdot(a.flatten(), b.flatten())) + + +class TestDot: + def setup_method(self): + np.random.seed(128) + self.A = np.random.rand(4, 2) + self.b1 = np.random.rand(2, 1) + self.b2 = np.random.rand(2) + self.b3 = np.random.rand(1, 2) + self.b4 = np.random.rand(4) + self.N = 7 + + def test_dotmatmat(self): + A = self.A + res = np.dot(A.transpose(), A) + tgt = np.array([[1.45046013, 0.86323640], + [0.86323640, 0.84934569]]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotmatvec(self): + A, b1 = self.A, self.b1 + res = np.dot(A, b1) + tgt = np.array([[0.32114320], [0.04889721], + [0.15696029], [0.33612621]]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotmatvec2(self): + A, b2 = self.A, self.b2 + res = np.dot(A, b2) + tgt = np.array([0.29677940, 0.04518649, 0.14468333, 0.31039293]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotvecmat(self): + A, b4 = self.A, self.b4 + res = np.dot(b4, A) + tgt = np.array([1.23495091, 1.12222648]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotvecmat2(self): + b3, A = self.b3, self.A + res = np.dot(b3, A.transpose()) + tgt = np.array([[0.58793804, 0.08957460, 0.30605758, 0.62716383]]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotvecmat3(self): + A, b4 = self.A, self.b4 + res = np.dot(A.transpose(), b4) + tgt = np.array([1.23495091, 1.12222648]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotvecvecouter(self): + b1, b3 = self.b1, self.b3 + res = np.dot(b1, b3) + tgt = np.array([[0.20128610, 0.08400440], [0.07190947, 0.03001058]]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotvecvecinner(self): + b1, b3 = self.b1, self.b3 + res = np.dot(b3, b1) + tgt = np.array([[ 0.23129668]]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotcolumnvect1(self): + b1 = np.ones((3, 1)) + b2 = [5.3] + res = np.dot(b1, b2) + tgt = np.array([5.3, 5.3, 5.3]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotcolumnvect2(self): + b1 = np.ones((3, 1)).transpose() + b2 = [6.2] + res = np.dot(b2, b1) + tgt = np.array([6.2, 6.2, 6.2]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotvecscalar(self): + np.random.seed(100) + b1 = np.random.rand(1, 1) + b2 = np.random.rand(1, 4) + res = np.dot(b1, b2) + tgt = np.array([[0.15126730, 0.23068496, 0.45905553, 0.00256425]]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_dotvecscalar2(self): + np.random.seed(100) + b1 = np.random.rand(4, 1) + b2 = np.random.rand(1, 1) + res = np.dot(b1, b2) + tgt = np.array([[0.00256425],[0.00131359],[0.00200324],[ 0.00398638]]) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_all(self): + dims = [(), (1,), (1, 1)] + dout = [(), (1,), (1, 1), (1,), (), (1,), (1, 1), (1,), (1, 1)] + for dim, (dim1, dim2) in zip(dout, itertools.product(dims, dims)): + b1 = np.zeros(dim1) + b2 = np.zeros(dim2) + res = np.dot(b1, b2) + tgt = np.zeros(dim) + assert_(res.shape == tgt.shape) + assert_almost_equal(res, tgt, decimal=self.N) + + def test_vecobject(self): + class Vec: + def __init__(self, sequence=None): + if sequence is None: + sequence = [] + self.array = np.array(sequence) + + def __add__(self, other): + out = Vec() + out.array = self.array + other.array + return out + + def __sub__(self, other): + out = Vec() + out.array = self.array - other.array + return out + + def __mul__(self, other): # with scalar + out = Vec(self.array.copy()) + out.array *= other + return out + + def __rmul__(self, other): + return self*other + + U_non_cont = np.transpose([[1., 1.], [1., 2.]]) + U_cont = np.ascontiguousarray(U_non_cont) + x = np.array([Vec([1., 0.]), Vec([0., 1.])]) + zeros = np.array([Vec([0., 0.]), Vec([0., 0.])]) + zeros_test = np.dot(U_cont, x) - np.dot(U_non_cont, x) + assert_equal(zeros[0].array, zeros_test[0].array) + assert_equal(zeros[1].array, zeros_test[1].array) + + def test_dot_2args(self): + + a = np.array([[1, 2], [3, 4]], dtype=float) + b = np.array([[1, 0], [1, 1]], dtype=float) + c = np.array([[3, 2], [7, 4]], dtype=float) + + d = dot(a, b) + assert_allclose(c, d) + + def test_dot_3args(self): + + np.random.seed(22) + f = np.random.random_sample((1024, 16)) + v = np.random.random_sample((16, 32)) + + r = np.empty((1024, 32)) + for i in range(12): + dot(f, v, r) + if HAS_REFCOUNT: + assert_equal(sys.getrefcount(r), 2) + r2 = dot(f, v, out=None) + assert_array_equal(r2, r) + assert_(r is dot(f, v, out=r)) + + v = v[:, 0].copy() # v.shape == (16,) + r = r[:, 0].copy() # r.shape == (1024,) + r2 = dot(f, v) + assert_(r is dot(f, v, r)) + assert_array_equal(r2, r) + + def test_dot_3args_errors(self): + + np.random.seed(22) + f = np.random.random_sample((1024, 16)) + v = np.random.random_sample((16, 32)) + + r = np.empty((1024, 31)) + assert_raises(ValueError, dot, f, v, r) + + r = np.empty((1024,)) + assert_raises(ValueError, dot, f, v, r) + + r = np.empty((32,)) + assert_raises(ValueError, dot, f, v, r) + + r = np.empty((32, 1024)) + assert_raises(ValueError, dot, f, v, r) + assert_raises(ValueError, dot, f, v, r.T) + + r = np.empty((1024, 64)) + assert_raises(ValueError, dot, f, v, r[:, ::2]) + assert_raises(ValueError, dot, f, v, r[:, :32]) + + r = np.empty((1024, 32), dtype=np.float32) + assert_raises(ValueError, dot, f, v, r) + + r = np.empty((1024, 32), dtype=int) + assert_raises(ValueError, dot, f, v, r) + + def test_dot_out_result(self): + x = np.ones((), dtype=np.float16) + y = np.ones((5,), dtype=np.float16) + z = np.zeros((5,), dtype=np.float16) + res = x.dot(y, out=z) + assert np.array_equal(res, y) + assert np.array_equal(z, y) + + def test_dot_out_aliasing(self): + x = np.ones((), dtype=np.float16) + y = np.ones((5,), dtype=np.float16) + z = np.zeros((5,), dtype=np.float16) + res = x.dot(y, out=z) + z[0] = 2 + assert np.array_equal(res, z) + + def test_dot_array_order(self): + a = np.array([[1, 2], [3, 4]], order='C') + b = np.array([[1, 2], [3, 4]], order='F') + res = np.dot(a, a) + + # integer arrays are exact + assert_equal(np.dot(a, b), res) + assert_equal(np.dot(b, a), res) + assert_equal(np.dot(b, b), res) + + def test_accelerate_framework_sgemv_fix(self): + + def aligned_array(shape, align, dtype, order='C'): + d = dtype(0) + N = np.prod(shape) + tmp = np.zeros(N * d.nbytes + align, dtype=np.uint8) + address = tmp.__array_interface__["data"][0] + for offset in range(align): + if (address + offset) % align == 0: + break + tmp = tmp[offset:offset+N*d.nbytes].view(dtype=dtype) + return tmp.reshape(shape, order=order) + + def as_aligned(arr, align, dtype, order='C'): + aligned = aligned_array(arr.shape, align, dtype, order) + aligned[:] = arr[:] + return aligned + + def assert_dot_close(A, X, desired): + assert_allclose(np.dot(A, X), desired, rtol=1e-5, atol=1e-7) + + m = aligned_array(100, 15, np.float32) + s = aligned_array((100, 100), 15, np.float32) + np.dot(s, m) # this will always segfault if the bug is present + + testdata = itertools.product((15, 32), (10000,), (200, 89), ('C', 'F')) + for align, m, n, a_order in testdata: + # Calculation in double precision + A_d = np.random.rand(m, n) + X_d = np.random.rand(n) + desired = np.dot(A_d, X_d) + # Calculation with aligned single precision + A_f = as_aligned(A_d, align, np.float32, order=a_order) + X_f = as_aligned(X_d, align, np.float32) + assert_dot_close(A_f, X_f, desired) + # Strided A rows + A_d_2 = A_d[::2] + desired = np.dot(A_d_2, X_d) + A_f_2 = A_f[::2] + assert_dot_close(A_f_2, X_f, desired) + # Strided A columns, strided X vector + A_d_22 = A_d_2[:, ::2] + X_d_2 = X_d[::2] + desired = np.dot(A_d_22, X_d_2) + A_f_22 = A_f_2[:, ::2] + X_f_2 = X_f[::2] + assert_dot_close(A_f_22, X_f_2, desired) + # Check the strides are as expected + if a_order == 'F': + assert_equal(A_f_22.strides, (8, 8 * m)) + else: + assert_equal(A_f_22.strides, (8 * n, 8)) + assert_equal(X_f_2.strides, (8,)) + # Strides in A rows + cols only + X_f_2c = as_aligned(X_f_2, align, np.float32) + assert_dot_close(A_f_22, X_f_2c, desired) + # Strides just in A cols + A_d_12 = A_d[:, ::2] + desired = np.dot(A_d_12, X_d_2) + A_f_12 = A_f[:, ::2] + assert_dot_close(A_f_12, X_f_2c, desired) + # Strides in A cols and X + assert_dot_close(A_f_12, X_f_2, desired) + + @pytest.mark.slow + @pytest.mark.parametrize("dtype", [np.float64, np.complex128]) + @requires_memory(free_bytes=18e9) # complex case needs 18GiB+ + def test_huge_vectordot(self, dtype): + # Large vector multiplications are chunked with 32bit BLAS + # Test that the chunking does the right thing, see also gh-22262 + data = np.ones(2**30+100, dtype=dtype) + res = np.dot(data, data) + assert res == 2**30+100 + + def test_dtype_discovery_fails(self): + # See gh-14247, error checking was missing for failed dtype discovery + class BadObject(object): + def __array__(self, dtype=None, copy=None): + raise TypeError("just this tiny mint leaf") + + with pytest.raises(TypeError): + np.dot(BadObject(), BadObject()) + + with pytest.raises(TypeError): + np.dot(3.0, BadObject()) + + +class MatmulCommon: + """Common tests for '@' operator and numpy.matmul. + + """ + # Should work with these types. Will want to add + # "O" at some point + types = "?bhilqBHILQefdgFDGO" + + def test_exceptions(self): + dims = [ + ((1,), (2,)), # mismatched vector vector + ((2, 1,), (2,)), # mismatched matrix vector + ((2,), (1, 2)), # mismatched vector matrix + ((1, 2), (3, 1)), # mismatched matrix matrix + ((1,), ()), # vector scalar + ((), (1)), # scalar vector + ((1, 1), ()), # matrix scalar + ((), (1, 1)), # scalar matrix + ((2, 2, 1), (3, 1, 2)), # cannot broadcast + ] + + for dt, (dm1, dm2) in itertools.product(self.types, dims): + a = np.ones(dm1, dtype=dt) + b = np.ones(dm2, dtype=dt) + assert_raises(ValueError, self.matmul, a, b) + + def test_shapes(self): + dims = [ + ((1, 1), (2, 1, 1)), # broadcast first argument + ((2, 1, 1), (1, 1)), # broadcast second argument + ((2, 1, 1), (2, 1, 1)), # matrix stack sizes match + ] + + for dt, (dm1, dm2) in itertools.product(self.types, dims): + a = np.ones(dm1, dtype=dt) + b = np.ones(dm2, dtype=dt) + res = self.matmul(a, b) + assert_(res.shape == (2, 1, 1)) + + # vector vector returns scalars. + for dt in self.types: + a = np.ones((2,), dtype=dt) + b = np.ones((2,), dtype=dt) + c = self.matmul(a, b) + assert_(np.array(c).shape == ()) + + def test_result_types(self): + mat = np.ones((1,1)) + vec = np.ones((1,)) + for dt in self.types: + m = mat.astype(dt) + v = vec.astype(dt) + for arg in [(m, v), (v, m), (m, m)]: + res = self.matmul(*arg) + assert_(res.dtype == dt) + + # vector vector returns scalars + if dt != "O": + res = self.matmul(v, v) + assert_(type(res) is np.dtype(dt).type) + + def test_scalar_output(self): + vec1 = np.array([2]) + vec2 = np.array([3, 4]).reshape(1, -1) + tgt = np.array([6, 8]) + for dt in self.types[1:]: + v1 = vec1.astype(dt) + v2 = vec2.astype(dt) + res = self.matmul(v1, v2) + assert_equal(res, tgt) + res = self.matmul(v2.T, v1) + assert_equal(res, tgt) + + # boolean type + vec = np.array([True, True], dtype='?').reshape(1, -1) + res = self.matmul(vec[:, 0], vec) + assert_equal(res, True) + + def test_vector_vector_values(self): + vec1 = np.array([1, 2]) + vec2 = np.array([3, 4]).reshape(-1, 1) + tgt1 = np.array([11]) + tgt2 = np.array([[3, 6], [4, 8]]) + for dt in self.types[1:]: + v1 = vec1.astype(dt) + v2 = vec2.astype(dt) + res = self.matmul(v1, v2) + assert_equal(res, tgt1) + # no broadcast, we must make v1 into a 2d ndarray + res = self.matmul(v2, v1.reshape(1, -1)) + assert_equal(res, tgt2) + + # boolean type + vec = np.array([True, True], dtype='?') + res = self.matmul(vec, vec) + assert_equal(res, True) + + def test_vector_matrix_values(self): + vec = np.array([1, 2]) + mat1 = np.array([[1, 2], [3, 4]]) + mat2 = np.stack([mat1]*2, axis=0) + tgt1 = np.array([7, 10]) + tgt2 = np.stack([tgt1]*2, axis=0) + for dt in self.types[1:]: + v = vec.astype(dt) + m1 = mat1.astype(dt) + m2 = mat2.astype(dt) + res = self.matmul(v, m1) + assert_equal(res, tgt1) + res = self.matmul(v, m2) + assert_equal(res, tgt2) + + # boolean type + vec = np.array([True, False]) + mat1 = np.array([[True, False], [False, True]]) + mat2 = np.stack([mat1]*2, axis=0) + tgt1 = np.array([True, False]) + tgt2 = np.stack([tgt1]*2, axis=0) + + res = self.matmul(vec, mat1) + assert_equal(res, tgt1) + res = self.matmul(vec, mat2) + assert_equal(res, tgt2) + + def test_matrix_vector_values(self): + vec = np.array([1, 2]) + mat1 = np.array([[1, 2], [3, 4]]) + mat2 = np.stack([mat1]*2, axis=0) + tgt1 = np.array([5, 11]) + tgt2 = np.stack([tgt1]*2, axis=0) + for dt in self.types[1:]: + v = vec.astype(dt) + m1 = mat1.astype(dt) + m2 = mat2.astype(dt) + res = self.matmul(m1, v) + assert_equal(res, tgt1) + res = self.matmul(m2, v) + assert_equal(res, tgt2) + + # boolean type + vec = np.array([True, False]) + mat1 = np.array([[True, False], [False, True]]) + mat2 = np.stack([mat1]*2, axis=0) + tgt1 = np.array([True, False]) + tgt2 = np.stack([tgt1]*2, axis=0) + + res = self.matmul(vec, mat1) + assert_equal(res, tgt1) + res = self.matmul(vec, mat2) + assert_equal(res, tgt2) + + def test_matrix_matrix_values(self): + mat1 = np.array([[1, 2], [3, 4]]) + mat2 = np.array([[1, 0], [1, 1]]) + mat12 = np.stack([mat1, mat2], axis=0) + mat21 = np.stack([mat2, mat1], axis=0) + tgt11 = np.array([[7, 10], [15, 22]]) + tgt12 = np.array([[3, 2], [7, 4]]) + tgt21 = np.array([[1, 2], [4, 6]]) + tgt12_21 = np.stack([tgt12, tgt21], axis=0) + tgt11_12 = np.stack((tgt11, tgt12), axis=0) + tgt11_21 = np.stack((tgt11, tgt21), axis=0) + for dt in self.types[1:]: + m1 = mat1.astype(dt) + m2 = mat2.astype(dt) + m12 = mat12.astype(dt) + m21 = mat21.astype(dt) + + # matrix @ matrix + res = self.matmul(m1, m2) + assert_equal(res, tgt12) + res = self.matmul(m2, m1) + assert_equal(res, tgt21) + + # stacked @ matrix + res = self.matmul(m12, m1) + assert_equal(res, tgt11_21) + + # matrix @ stacked + res = self.matmul(m1, m12) + assert_equal(res, tgt11_12) + + # stacked @ stacked + res = self.matmul(m12, m21) + assert_equal(res, tgt12_21) + + # boolean type + m1 = np.array([[1, 1], [0, 0]], dtype=np.bool) + m2 = np.array([[1, 0], [1, 1]], dtype=np.bool) + m12 = np.stack([m1, m2], axis=0) + m21 = np.stack([m2, m1], axis=0) + tgt11 = m1 + tgt12 = m1 + tgt21 = np.array([[1, 1], [1, 1]], dtype=np.bool) + tgt12_21 = np.stack([tgt12, tgt21], axis=0) + tgt11_12 = np.stack((tgt11, tgt12), axis=0) + tgt11_21 = np.stack((tgt11, tgt21), axis=0) + + # matrix @ matrix + res = self.matmul(m1, m2) + assert_equal(res, tgt12) + res = self.matmul(m2, m1) + assert_equal(res, tgt21) + + # stacked @ matrix + res = self.matmul(m12, m1) + assert_equal(res, tgt11_21) + + # matrix @ stacked + res = self.matmul(m1, m12) + assert_equal(res, tgt11_12) + + # stacked @ stacked + res = self.matmul(m12, m21) + assert_equal(res, tgt12_21) + + +class TestMatmul(MatmulCommon): + matmul = np.matmul + + def test_out_arg(self): + a = np.ones((5, 2), dtype=float) + b = np.array([[1, 3], [5, 7]], dtype=float) + tgt = np.dot(a, b) + + # test as positional argument + msg = "out positional argument" + out = np.zeros((5, 2), dtype=float) + self.matmul(a, b, out) + assert_array_equal(out, tgt, err_msg=msg) + + # test as keyword argument + msg = "out keyword argument" + out = np.zeros((5, 2), dtype=float) + self.matmul(a, b, out=out) + assert_array_equal(out, tgt, err_msg=msg) + + # test out with not allowed type cast (safe casting) + msg = "Cannot cast ufunc .* output" + out = np.zeros((5, 2), dtype=np.int32) + assert_raises_regex(TypeError, msg, self.matmul, a, b, out=out) + + # test out with type upcast to complex + out = np.zeros((5, 2), dtype=np.complex128) + c = self.matmul(a, b, out=out) + assert_(c is out) + with suppress_warnings() as sup: + sup.filter(ComplexWarning, '') + c = c.astype(tgt.dtype) + assert_array_equal(c, tgt) + + def test_empty_out(self): + # Check that the output cannot be broadcast, so that it cannot be + # size zero when the outer dimensions (iterator size) has size zero. + arr = np.ones((0, 1, 1)) + out = np.ones((1, 1, 1)) + assert self.matmul(arr, arr).shape == (0, 1, 1) + + with pytest.raises(ValueError, match=r"non-broadcastable"): + self.matmul(arr, arr, out=out) + + def test_out_contiguous(self): + a = np.ones((5, 2), dtype=float) + b = np.array([[1, 3], [5, 7]], dtype=float) + v = np.array([1, 3], dtype=float) + tgt = np.dot(a, b) + tgt_mv = np.dot(a, v) + + # test out non-contiguous + out = np.ones((5, 2, 2), dtype=float) + c = self.matmul(a, b, out=out[..., 0]) + assert c.base is out + assert_array_equal(c, tgt) + c = self.matmul(a, v, out=out[:, 0, 0]) + assert_array_equal(c, tgt_mv) + c = self.matmul(v, a.T, out=out[:, 0, 0]) + assert_array_equal(c, tgt_mv) + + # test out contiguous in only last dim + out = np.ones((10, 2), dtype=float) + c = self.matmul(a, b, out=out[::2, :]) + assert_array_equal(c, tgt) + + # test transposes of out, args + out = np.ones((5, 2), dtype=float) + c = self.matmul(b.T, a.T, out=out.T) + assert_array_equal(out, tgt) + + m1 = np.arange(15.).reshape(5, 3) + m2 = np.arange(21.).reshape(3, 7) + m3 = np.arange(30.).reshape(5, 6)[:, ::2] # non-contiguous + vc = np.arange(10.) + vr = np.arange(6.) + m0 = np.zeros((3, 0)) + @pytest.mark.parametrize('args', ( + # matrix-matrix + (m1, m2), (m2.T, m1.T), (m2.T.copy(), m1.T), (m2.T, m1.T.copy()), + # matrix-matrix-transpose, contiguous and non + (m1, m1.T), (m1.T, m1), (m1, m3.T), (m3, m1.T), + (m3, m3.T), (m3.T, m3), + # matrix-matrix non-contiguous + (m3, m2), (m2.T, m3.T), (m2.T.copy(), m3.T), + # vector-matrix, matrix-vector, contiguous + (m1, vr[:3]), (vc[:5], m1), (m1.T, vc[:5]), (vr[:3], m1.T), + # vector-matrix, matrix-vector, vector non-contiguous + (m1, vr[::2]), (vc[::2], m1), (m1.T, vc[::2]), (vr[::2], m1.T), + # vector-matrix, matrix-vector, matrix non-contiguous + (m3, vr[:3]), (vc[:5], m3), (m3.T, vc[:5]), (vr[:3], m3.T), + # vector-matrix, matrix-vector, both non-contiguous + (m3, vr[::2]), (vc[::2], m3), (m3.T, vc[::2]), (vr[::2], m3.T), + # size == 0 + (m0, m0.T), (m0.T, m0), (m1, m0), (m0.T, m1.T), + )) + def test_dot_equivalent(self, args): + r1 = np.matmul(*args) + r2 = np.dot(*args) + assert_equal(r1, r2) + + r3 = np.matmul(args[0].copy(), args[1].copy()) + assert_equal(r1, r3) + + def test_matmul_object(self): + import fractions + + f = np.vectorize(fractions.Fraction) + def random_ints(): + return np.random.randint(1, 1000, size=(10, 3, 3)) + M1 = f(random_ints(), random_ints()) + M2 = f(random_ints(), random_ints()) + + M3 = self.matmul(M1, M2) + + [N1, N2, N3] = [a.astype(float) for a in [M1, M2, M3]] + + assert_allclose(N3, self.matmul(N1, N2)) + + def test_matmul_object_type_scalar(self): + from fractions import Fraction as F + v = np.array([F(2,3), F(5,7)]) + res = self.matmul(v, v) + assert_(type(res) is F) + + def test_matmul_empty(self): + a = np.empty((3, 0), dtype=object) + b = np.empty((0, 3), dtype=object) + c = np.zeros((3, 3)) + assert_array_equal(np.matmul(a, b), c) + + def test_matmul_exception_multiply(self): + # test that matmul fails if `__mul__` is missing + class add_not_multiply(): + def __add__(self, other): + return self + a = np.full((3,3), add_not_multiply()) + with assert_raises(TypeError): + b = np.matmul(a, a) + + def test_matmul_exception_add(self): + # test that matmul fails if `__add__` is missing + class multiply_not_add(): + def __mul__(self, other): + return self + a = np.full((3,3), multiply_not_add()) + with assert_raises(TypeError): + b = np.matmul(a, a) + + def test_matmul_bool(self): + # gh-14439 + a = np.array([[1, 0],[1, 1]], dtype=bool) + assert np.max(a.view(np.uint8)) == 1 + b = np.matmul(a, a) + # matmul with boolean output should always be 0, 1 + assert np.max(b.view(np.uint8)) == 1 + + rg = np.random.default_rng(np.random.PCG64(43)) + d = rg.integers(2, size=4*5, dtype=np.int8) + d = d.reshape(4, 5) > 0 + out1 = np.matmul(d, d.reshape(5, 4)) + out2 = np.dot(d, d.reshape(5, 4)) + assert_equal(out1, out2) + + c = np.matmul(np.zeros((2, 0), dtype=bool), np.zeros(0, dtype=bool)) + assert not np.any(c) + + +class TestMatmulOperator(MatmulCommon): + import operator + matmul = operator.matmul + + def test_array_priority_override(self): + + class A: + __array_priority__ = 1000 + + def __matmul__(self, other): + return "A" + + def __rmatmul__(self, other): + return "A" + + a = A() + b = np.ones(2) + assert_equal(self.matmul(a, b), "A") + assert_equal(self.matmul(b, a), "A") + + def test_matmul_raises(self): + assert_raises(TypeError, self.matmul, np.int8(5), np.int8(5)) + assert_raises(TypeError, self.matmul, np.void(b'abc'), np.void(b'abc')) + assert_raises(TypeError, self.matmul, np.arange(10), np.void(b'abc')) + + +class TestMatmulInplace: + DTYPES = {} + for i in MatmulCommon.types: + for j in MatmulCommon.types: + if np.can_cast(j, i): + DTYPES[f"{i}-{j}"] = (np.dtype(i), np.dtype(j)) + + @pytest.mark.parametrize("dtype1,dtype2", DTYPES.values(), ids=DTYPES) + def test_basic(self, dtype1: np.dtype, dtype2: np.dtype) -> None: + a = np.arange(10).reshape(5, 2).astype(dtype1) + a_id = id(a) + b = np.ones((2, 2), dtype=dtype2) + + ref = a @ b + a @= b + + assert id(a) == a_id + assert a.dtype == dtype1 + assert a.shape == (5, 2) + if dtype1.kind in "fc": + np.testing.assert_allclose(a, ref) + else: + np.testing.assert_array_equal(a, ref) + + SHAPES = { + "2d_large": ((10**5, 10), (10, 10)), + "3d_large": ((10**4, 10, 10), (1, 10, 10)), + "1d": ((3,), (3,)), + "2d_1d": ((3, 3), (3,)), + "1d_2d": ((3,), (3, 3)), + "2d_broadcast": ((3, 3), (3, 1)), + "2d_broadcast_reverse": ((1, 3), (3, 3)), + "3d_broadcast1": ((3, 3, 3), (1, 3, 1)), + "3d_broadcast2": ((3, 3, 3), (1, 3, 3)), + "3d_broadcast3": ((3, 3, 3), (3, 3, 1)), + "3d_broadcast_reverse1": ((1, 3, 3), (3, 3, 3)), + "3d_broadcast_reverse2": ((3, 1, 3), (3, 3, 3)), + "3d_broadcast_reverse3": ((1, 1, 3), (3, 3, 3)), + } + + @pytest.mark.parametrize("a_shape,b_shape", SHAPES.values(), ids=SHAPES) + def test_shapes(self, a_shape: tuple[int, ...], b_shape: tuple[int, ...]): + a_size = np.prod(a_shape) + a = np.arange(a_size).reshape(a_shape).astype(np.float64) + a_id = id(a) + + b_size = np.prod(b_shape) + b = np.arange(b_size).reshape(b_shape) + + ref = a @ b + if ref.shape != a_shape: + with pytest.raises(ValueError): + a @= b + return + else: + a @= b + + assert id(a) == a_id + assert a.dtype.type == np.float64 + assert a.shape == a_shape + np.testing.assert_allclose(a, ref) + + +def test_matmul_axes(): + a = np.arange(3*4*5).reshape(3, 4, 5) + c = np.matmul(a, a, axes=[(-2, -1), (-1, -2), (1, 2)]) + assert c.shape == (3, 4, 4) + d = np.matmul(a, a, axes=[(-2, -1), (-1, -2), (0, 1)]) + assert d.shape == (4, 4, 3) + e = np.swapaxes(d, 0, 2) + assert_array_equal(e, c) + f = np.matmul(a, np.arange(3), axes=[(1, 0), (0), (0)]) + assert f.shape == (4, 5) + + +class TestInner: + + def test_inner_type_mismatch(self): + c = 1. + A = np.array((1,1), dtype='i,i') + + assert_raises(TypeError, np.inner, c, A) + assert_raises(TypeError, np.inner, A, c) + + def test_inner_scalar_and_vector(self): + for dt in np.typecodes['AllInteger'] + np.typecodes['AllFloat'] + '?': + sca = np.array(3, dtype=dt)[()] + vec = np.array([1, 2], dtype=dt) + desired = np.array([3, 6], dtype=dt) + assert_equal(np.inner(vec, sca), desired) + assert_equal(np.inner(sca, vec), desired) + + def test_vecself(self): + # Ticket 844. + # Inner product of a vector with itself segfaults or give + # meaningless result + a = np.zeros(shape=(1, 80), dtype=np.float64) + p = np.inner(a, a) + assert_almost_equal(p, 0, decimal=14) + + def test_inner_product_with_various_contiguities(self): + # github issue 6532 + for dt in np.typecodes['AllInteger'] + np.typecodes['AllFloat'] + '?': + # check an inner product involving a matrix transpose + A = np.array([[1, 2], [3, 4]], dtype=dt) + B = np.array([[1, 3], [2, 4]], dtype=dt) + C = np.array([1, 1], dtype=dt) + desired = np.array([4, 6], dtype=dt) + assert_equal(np.inner(A.T, C), desired) + assert_equal(np.inner(C, A.T), desired) + assert_equal(np.inner(B, C), desired) + assert_equal(np.inner(C, B), desired) + # check a matrix product + desired = np.array([[7, 10], [15, 22]], dtype=dt) + assert_equal(np.inner(A, B), desired) + # check the syrk vs. gemm paths + desired = np.array([[5, 11], [11, 25]], dtype=dt) + assert_equal(np.inner(A, A), desired) + assert_equal(np.inner(A, A.copy()), desired) + # check an inner product involving an aliased and reversed view + a = np.arange(5).astype(dt) + b = a[::-1] + desired = np.array(10, dtype=dt).item() + assert_equal(np.inner(b, a), desired) + + def test_3d_tensor(self): + for dt in np.typecodes['AllInteger'] + np.typecodes['AllFloat'] + '?': + a = np.arange(24).reshape(2,3,4).astype(dt) + b = np.arange(24, 48).reshape(2,3,4).astype(dt) + desired = np.array( + [[[[ 158, 182, 206], + [ 230, 254, 278]], + + [[ 566, 654, 742], + [ 830, 918, 1006]], + + [[ 974, 1126, 1278], + [1430, 1582, 1734]]], + + [[[1382, 1598, 1814], + [2030, 2246, 2462]], + + [[1790, 2070, 2350], + [2630, 2910, 3190]], + + [[2198, 2542, 2886], + [3230, 3574, 3918]]]] + ).astype(dt) + assert_equal(np.inner(a, b), desired) + assert_equal(np.inner(b, a).transpose(2,3,0,1), desired) + + +class TestChoose: + def setup_method(self): + self.x = 2*np.ones((3,), dtype=int) + self.y = 3*np.ones((3,), dtype=int) + self.x2 = 2*np.ones((2, 3), dtype=int) + self.y2 = 3*np.ones((2, 3), dtype=int) + self.ind = [0, 0, 1] + + def test_basic(self): + A = np.choose(self.ind, (self.x, self.y)) + assert_equal(A, [2, 2, 3]) + + def test_broadcast1(self): + A = np.choose(self.ind, (self.x2, self.y2)) + assert_equal(A, [[2, 2, 3], [2, 2, 3]]) + + def test_broadcast2(self): + A = np.choose(self.ind, (self.x, self.y2)) + assert_equal(A, [[2, 2, 3], [2, 2, 3]]) + + @pytest.mark.parametrize("ops", + [(1000, np.array([1], dtype=np.uint8)), + (-1, np.array([1], dtype=np.uint8)), + (1., np.float32(3)), + (1., np.array([3], dtype=np.float32))],) + def test_output_dtype(self, ops): + expected_dt = np.result_type(*ops) + assert(np.choose([0], ops).dtype == expected_dt) + + def test_dimension_and_args_limit(self): + # Maxdims for the legacy iterator is 32, but the maximum number + # of arguments is actually larger (a itself also counts here) + a = np.ones((1,) * 32, dtype=np.intp) + res = a.choose([0, a] + [2] * 61) + with pytest.raises(ValueError, + match="Need at least 0 and at most 64 array objects"): + a.choose([0, a] + [2] * 62) + + assert_array_equal(res, a) + # Choose is unfortunately limited to 32 dims as of NumPy 2.0 + a = np.ones((1,) * 60, dtype=np.intp) + with pytest.raises(RuntimeError, + match=".*32 dimensions but the array has 60"): + a.choose([a, a]) + + +class TestRepeat: + def setup_method(self): + self.m = np.array([1, 2, 3, 4, 5, 6]) + self.m_rect = self.m.reshape((2, 3)) + + def test_basic(self): + A = np.repeat(self.m, [1, 3, 2, 1, 1, 2]) + assert_equal(A, [1, 2, 2, 2, 3, + 3, 4, 5, 6, 6]) + + def test_broadcast1(self): + A = np.repeat(self.m, 2) + assert_equal(A, [1, 1, 2, 2, 3, 3, + 4, 4, 5, 5, 6, 6]) + + def test_axis_spec(self): + A = np.repeat(self.m_rect, [2, 1], axis=0) + assert_equal(A, [[1, 2, 3], + [1, 2, 3], + [4, 5, 6]]) + + A = np.repeat(self.m_rect, [1, 3, 2], axis=1) + assert_equal(A, [[1, 2, 2, 2, 3, 3], + [4, 5, 5, 5, 6, 6]]) + + def test_broadcast2(self): + A = np.repeat(self.m_rect, 2, axis=0) + assert_equal(A, [[1, 2, 3], + [1, 2, 3], + [4, 5, 6], + [4, 5, 6]]) + + A = np.repeat(self.m_rect, 2, axis=1) + assert_equal(A, [[1, 1, 2, 2, 3, 3], + [4, 4, 5, 5, 6, 6]]) + + +# TODO: test for multidimensional +NEIGH_MODE = {'zero': 0, 'one': 1, 'constant': 2, 'circular': 3, 'mirror': 4} + + +@pytest.mark.parametrize('dt', [float, Decimal], ids=['float', 'object']) +class TestNeighborhoodIter: + # Simple, 2d tests + def test_simple2d(self, dt): + # Test zero and one padding for simple data type + x = np.array([[0, 1], [2, 3]], dtype=dt) + r = [np.array([[0, 0, 0], [0, 0, 1]], dtype=dt), + np.array([[0, 0, 0], [0, 1, 0]], dtype=dt), + np.array([[0, 0, 1], [0, 2, 3]], dtype=dt), + np.array([[0, 1, 0], [2, 3, 0]], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator( + x, [-1, 0, -1, 1], x[0], NEIGH_MODE['zero']) + assert_array_equal(l, r) + + r = [np.array([[1, 1, 1], [1, 0, 1]], dtype=dt), + np.array([[1, 1, 1], [0, 1, 1]], dtype=dt), + np.array([[1, 0, 1], [1, 2, 3]], dtype=dt), + np.array([[0, 1, 1], [2, 3, 1]], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator( + x, [-1, 0, -1, 1], x[0], NEIGH_MODE['one']) + assert_array_equal(l, r) + + r = [np.array([[4, 4, 4], [4, 0, 1]], dtype=dt), + np.array([[4, 4, 4], [0, 1, 4]], dtype=dt), + np.array([[4, 0, 1], [4, 2, 3]], dtype=dt), + np.array([[0, 1, 4], [2, 3, 4]], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator( + x, [-1, 0, -1, 1], 4, NEIGH_MODE['constant']) + assert_array_equal(l, r) + + # Test with start in the middle + r = [np.array([[4, 0, 1], [4, 2, 3]], dtype=dt), + np.array([[0, 1, 4], [2, 3, 4]], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator( + x, [-1, 0, -1, 1], 4, NEIGH_MODE['constant'], 2) + assert_array_equal(l, r) + + def test_mirror2d(self, dt): + x = np.array([[0, 1], [2, 3]], dtype=dt) + r = [np.array([[0, 0, 1], [0, 0, 1]], dtype=dt), + np.array([[0, 1, 1], [0, 1, 1]], dtype=dt), + np.array([[0, 0, 1], [2, 2, 3]], dtype=dt), + np.array([[0, 1, 1], [2, 3, 3]], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator( + x, [-1, 0, -1, 1], x[0], NEIGH_MODE['mirror']) + assert_array_equal(l, r) + + # Simple, 1d tests + def test_simple(self, dt): + # Test padding with constant values + x = np.linspace(1, 5, 5).astype(dt) + r = [[0, 1, 2], [1, 2, 3], [2, 3, 4], [3, 4, 5], [4, 5, 0]] + l = _multiarray_tests.test_neighborhood_iterator( + x, [-1, 1], x[0], NEIGH_MODE['zero']) + assert_array_equal(l, r) + + r = [[1, 1, 2], [1, 2, 3], [2, 3, 4], [3, 4, 5], [4, 5, 1]] + l = _multiarray_tests.test_neighborhood_iterator( + x, [-1, 1], x[0], NEIGH_MODE['one']) + assert_array_equal(l, r) + + r = [[x[4], 1, 2], [1, 2, 3], [2, 3, 4], [3, 4, 5], [4, 5, x[4]]] + l = _multiarray_tests.test_neighborhood_iterator( + x, [-1, 1], x[4], NEIGH_MODE['constant']) + assert_array_equal(l, r) + + # Test mirror modes + def test_mirror(self, dt): + x = np.linspace(1, 5, 5).astype(dt) + r = np.array([[2, 1, 1, 2, 3], [1, 1, 2, 3, 4], [1, 2, 3, 4, 5], + [2, 3, 4, 5, 5], [3, 4, 5, 5, 4]], dtype=dt) + l = _multiarray_tests.test_neighborhood_iterator( + x, [-2, 2], x[1], NEIGH_MODE['mirror']) + assert_([i.dtype == dt for i in l]) + assert_array_equal(l, r) + + # Circular mode + def test_circular(self, dt): + x = np.linspace(1, 5, 5).astype(dt) + r = np.array([[4, 5, 1, 2, 3], [5, 1, 2, 3, 4], [1, 2, 3, 4, 5], + [2, 3, 4, 5, 1], [3, 4, 5, 1, 2]], dtype=dt) + l = _multiarray_tests.test_neighborhood_iterator( + x, [-2, 2], x[0], NEIGH_MODE['circular']) + assert_array_equal(l, r) + + +# Test stacking neighborhood iterators +class TestStackedNeighborhoodIter: + # Simple, 1d test: stacking 2 constant-padded neigh iterators + def test_simple_const(self): + dt = np.float64 + # Test zero and one padding for simple data type + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([0], dtype=dt), + np.array([0], dtype=dt), + np.array([1], dtype=dt), + np.array([2], dtype=dt), + np.array([3], dtype=dt), + np.array([0], dtype=dt), + np.array([0], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-2, 4], NEIGH_MODE['zero'], [0, 0], NEIGH_MODE['zero']) + assert_array_equal(l, r) + + r = [np.array([1, 0, 1], dtype=dt), + np.array([0, 1, 2], dtype=dt), + np.array([1, 2, 3], dtype=dt), + np.array([2, 3, 0], dtype=dt), + np.array([3, 0, 1], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-1, 3], NEIGH_MODE['zero'], [-1, 1], NEIGH_MODE['one']) + assert_array_equal(l, r) + + # 2nd simple, 1d test: stacking 2 neigh iterators, mixing const padding and + # mirror padding + def test_simple_mirror(self): + dt = np.float64 + # Stacking zero on top of mirror + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([0, 1, 1], dtype=dt), + np.array([1, 1, 2], dtype=dt), + np.array([1, 2, 3], dtype=dt), + np.array([2, 3, 3], dtype=dt), + np.array([3, 3, 0], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-1, 3], NEIGH_MODE['mirror'], [-1, 1], NEIGH_MODE['zero']) + assert_array_equal(l, r) + + # Stacking mirror on top of zero + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([1, 0, 0], dtype=dt), + np.array([0, 0, 1], dtype=dt), + np.array([0, 1, 2], dtype=dt), + np.array([1, 2, 3], dtype=dt), + np.array([2, 3, 0], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-1, 3], NEIGH_MODE['zero'], [-2, 0], NEIGH_MODE['mirror']) + assert_array_equal(l, r) + + # Stacking mirror on top of zero: 2nd + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([0, 1, 2], dtype=dt), + np.array([1, 2, 3], dtype=dt), + np.array([2, 3, 0], dtype=dt), + np.array([3, 0, 0], dtype=dt), + np.array([0, 0, 3], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-1, 3], NEIGH_MODE['zero'], [0, 2], NEIGH_MODE['mirror']) + assert_array_equal(l, r) + + # Stacking mirror on top of zero: 3rd + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([1, 0, 0, 1, 2], dtype=dt), + np.array([0, 0, 1, 2, 3], dtype=dt), + np.array([0, 1, 2, 3, 0], dtype=dt), + np.array([1, 2, 3, 0, 0], dtype=dt), + np.array([2, 3, 0, 0, 3], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-1, 3], NEIGH_MODE['zero'], [-2, 2], NEIGH_MODE['mirror']) + assert_array_equal(l, r) + + # 3rd simple, 1d test: stacking 2 neigh iterators, mixing const padding and + # circular padding + def test_simple_circular(self): + dt = np.float64 + # Stacking zero on top of mirror + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([0, 3, 1], dtype=dt), + np.array([3, 1, 2], dtype=dt), + np.array([1, 2, 3], dtype=dt), + np.array([2, 3, 1], dtype=dt), + np.array([3, 1, 0], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-1, 3], NEIGH_MODE['circular'], [-1, 1], NEIGH_MODE['zero']) + assert_array_equal(l, r) + + # Stacking mirror on top of zero + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([3, 0, 0], dtype=dt), + np.array([0, 0, 1], dtype=dt), + np.array([0, 1, 2], dtype=dt), + np.array([1, 2, 3], dtype=dt), + np.array([2, 3, 0], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-1, 3], NEIGH_MODE['zero'], [-2, 0], NEIGH_MODE['circular']) + assert_array_equal(l, r) + + # Stacking mirror on top of zero: 2nd + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([0, 1, 2], dtype=dt), + np.array([1, 2, 3], dtype=dt), + np.array([2, 3, 0], dtype=dt), + np.array([3, 0, 0], dtype=dt), + np.array([0, 0, 1], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-1, 3], NEIGH_MODE['zero'], [0, 2], NEIGH_MODE['circular']) + assert_array_equal(l, r) + + # Stacking mirror on top of zero: 3rd + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([3, 0, 0, 1, 2], dtype=dt), + np.array([0, 0, 1, 2, 3], dtype=dt), + np.array([0, 1, 2, 3, 0], dtype=dt), + np.array([1, 2, 3, 0, 0], dtype=dt), + np.array([2, 3, 0, 0, 1], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [-1, 3], NEIGH_MODE['zero'], [-2, 2], NEIGH_MODE['circular']) + assert_array_equal(l, r) + + # 4th simple, 1d test: stacking 2 neigh iterators, but with lower iterator + # being strictly within the array + def test_simple_strict_within(self): + dt = np.float64 + # Stacking zero on top of zero, first neighborhood strictly inside the + # array + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([1, 2, 3, 0], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [1, 1], NEIGH_MODE['zero'], [-1, 2], NEIGH_MODE['zero']) + assert_array_equal(l, r) + + # Stacking mirror on top of zero, first neighborhood strictly inside the + # array + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([1, 2, 3, 3], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [1, 1], NEIGH_MODE['zero'], [-1, 2], NEIGH_MODE['mirror']) + assert_array_equal(l, r) + + # Stacking mirror on top of zero, first neighborhood strictly inside the + # array + x = np.array([1, 2, 3], dtype=dt) + r = [np.array([1, 2, 3, 1], dtype=dt)] + l = _multiarray_tests.test_neighborhood_iterator_oob( + x, [1, 1], NEIGH_MODE['zero'], [-1, 2], NEIGH_MODE['circular']) + assert_array_equal(l, r) + +class TestWarnings: + + def test_complex_warning(self): + x = np.array([1, 2]) + y = np.array([1-2j, 1+2j]) + + with warnings.catch_warnings(): + warnings.simplefilter("error", ComplexWarning) + assert_raises(ComplexWarning, x.__setitem__, slice(None), y) + assert_equal(x, [1, 2]) + + +class TestMinScalarType: + + def test_usigned_shortshort(self): + dt = np.min_scalar_type(2**8-1) + wanted = np.dtype('uint8') + assert_equal(wanted, dt) + + def test_usigned_short(self): + dt = np.min_scalar_type(2**16-1) + wanted = np.dtype('uint16') + assert_equal(wanted, dt) + + def test_usigned_int(self): + dt = np.min_scalar_type(2**32-1) + wanted = np.dtype('uint32') + assert_equal(wanted, dt) + + def test_usigned_longlong(self): + dt = np.min_scalar_type(2**63-1) + wanted = np.dtype('uint64') + assert_equal(wanted, dt) + + def test_object(self): + dt = np.min_scalar_type(2**64) + wanted = np.dtype('O') + assert_equal(wanted, dt) + + +from numpy._core._internal import _dtype_from_pep3118 + + +class TestPEP3118Dtype: + def _check(self, spec, wanted): + dt = np.dtype(wanted) + actual = _dtype_from_pep3118(spec) + assert_equal(actual, dt, + err_msg="spec %r != dtype %r" % (spec, wanted)) + + def test_native_padding(self): + align = np.dtype('i').alignment + for j in range(8): + if j == 0: + s = 'bi' + else: + s = 'b%dxi' % j + self._check('@'+s, {'f0': ('i1', 0), + 'f1': ('i', align*(1 + j//align))}) + self._check('='+s, {'f0': ('i1', 0), + 'f1': ('i', 1+j)}) + + def test_native_padding_2(self): + # Native padding should work also for structs and sub-arrays + self._check('x3T{xi}', {'f0': (({'f0': ('i', 4)}, (3,)), 4)}) + self._check('^x3T{xi}', {'f0': (({'f0': ('i', 1)}, (3,)), 1)}) + + def test_trailing_padding(self): + # Trailing padding should be included, *and*, the item size + # should match the alignment if in aligned mode + align = np.dtype('i').alignment + size = np.dtype('i').itemsize + + def aligned(n): + return align*(1 + (n-1)//align) + + base = dict(formats=['i'], names=['f0']) + + self._check('ix', dict(itemsize=aligned(size + 1), **base)) + self._check('ixx', dict(itemsize=aligned(size + 2), **base)) + self._check('ixxx', dict(itemsize=aligned(size + 3), **base)) + self._check('ixxxx', dict(itemsize=aligned(size + 4), **base)) + self._check('i7x', dict(itemsize=aligned(size + 7), **base)) + + self._check('^ix', dict(itemsize=size + 1, **base)) + self._check('^ixx', dict(itemsize=size + 2, **base)) + self._check('^ixxx', dict(itemsize=size + 3, **base)) + self._check('^ixxxx', dict(itemsize=size + 4, **base)) + self._check('^i7x', dict(itemsize=size + 7, **base)) + + def test_native_padding_3(self): + dt = np.dtype( + [('a', 'b'), ('b', 'i'), + ('sub', np.dtype('b,i')), ('c', 'i')], + align=True) + self._check("T{b:a:xxxi:b:T{b:f0:=i:f1:}:sub:xxxi:c:}", dt) + + dt = np.dtype( + [('a', 'b'), ('b', 'i'), ('c', 'b'), ('d', 'b'), + ('e', 'b'), ('sub', np.dtype('b,i', align=True))]) + self._check("T{b:a:=i:b:b:c:b:d:b:e:T{b:f0:xxxi:f1:}:sub:}", dt) + + def test_padding_with_array_inside_struct(self): + dt = np.dtype( + [('a', 'b'), ('b', 'i'), ('c', 'b', (3,)), + ('d', 'i')], + align=True) + self._check("T{b:a:xxxi:b:3b:c:xi:d:}", dt) + + def test_byteorder_inside_struct(self): + # The byte order after @T{=i} should be '=', not '@'. + # Check this by noting the absence of native alignment. + self._check('@T{^i}xi', {'f0': ({'f0': ('i', 0)}, 0), + 'f1': ('i', 5)}) + + def test_intra_padding(self): + # Natively aligned sub-arrays may require some internal padding + align = np.dtype('i').alignment + size = np.dtype('i').itemsize + + def aligned(n): + return (align*(1 + (n-1)//align)) + + self._check('(3)T{ix}', (dict( + names=['f0'], + formats=['i'], + offsets=[0], + itemsize=aligned(size + 1) + ), (3,))) + + def test_char_vs_string(self): + dt = np.dtype('c') + self._check('c', dt) + + dt = np.dtype([('f0', 'S1', (4,)), ('f1', 'S4')]) + self._check('4c4s', dt) + + def test_field_order(self): + # gh-9053 - previously, we relied on dictionary key order + self._check("(0)I:a:f:b:", [('a', 'I', (0,)), ('b', 'f')]) + self._check("(0)I:b:f:a:", [('b', 'I', (0,)), ('a', 'f')]) + + def test_unnamed_fields(self): + self._check('ii', [('f0', 'i'), ('f1', 'i')]) + self._check('ii:f0:', [('f1', 'i'), ('f0', 'i')]) + + self._check('i', 'i') + self._check('i:f0:', [('f0', 'i')]) + + +class TestNewBufferProtocol: + """ Test PEP3118 buffers """ + + def _check_roundtrip(self, obj): + obj = np.asarray(obj) + x = memoryview(obj) + y = np.asarray(x) + y2 = np.array(x) + assert_(not y.flags.owndata) + assert_(y2.flags.owndata) + + assert_equal(y.dtype, obj.dtype) + assert_equal(y.shape, obj.shape) + assert_array_equal(obj, y) + + assert_equal(y2.dtype, obj.dtype) + assert_equal(y2.shape, obj.shape) + assert_array_equal(obj, y2) + + def test_roundtrip(self): + x = np.array([1, 2, 3, 4, 5], dtype='i4') + self._check_roundtrip(x) + + x = np.array([[1, 2], [3, 4]], dtype=np.float64) + self._check_roundtrip(x) + + x = np.zeros((3, 3, 3), dtype=np.float32)[:, 0,:] + self._check_roundtrip(x) + + dt = [('a', 'b'), + ('b', 'h'), + ('c', 'i'), + ('d', 'l'), + ('dx', 'q'), + ('e', 'B'), + ('f', 'H'), + ('g', 'I'), + ('h', 'L'), + ('hx', 'Q'), + ('i', np.single), + ('j', np.double), + ('k', np.longdouble), + ('ix', np.csingle), + ('jx', np.cdouble), + ('kx', np.clongdouble), + ('l', 'S4'), + ('m', 'U4'), + ('n', 'V3'), + ('o', '?'), + ('p', np.half), + ] + x = np.array( + [(1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, + b'aaaa', 'bbbb', b'xxx', True, 1.0)], + dtype=dt) + self._check_roundtrip(x) + + x = np.array(([[1, 2], [3, 4]],), dtype=[('a', (int, (2, 2)))]) + self._check_roundtrip(x) + + x = np.array([1, 2, 3], dtype='>i2') + self._check_roundtrip(x) + + x = np.array([1, 2, 3], dtype='') + x = np.zeros(4, dtype=dt) + self._check_roundtrip(x) + + def test_roundtrip_scalar(self): + # Issue #4015. + self._check_roundtrip(0) + + def test_invalid_buffer_format(self): + # datetime64 cannot be used fully in a buffer yet + # Should be fixed in the next Numpy major release + dt = np.dtype([('a', 'uint16'), ('b', 'M8[s]')]) + a = np.empty(3, dt) + assert_raises((ValueError, BufferError), memoryview, a) + assert_raises((ValueError, BufferError), memoryview, np.array((3), 'M8[D]')) + + def test_export_simple_1d(self): + x = np.array([1, 2, 3, 4, 5], dtype='i') + y = memoryview(x) + assert_equal(y.format, 'i') + assert_equal(y.shape, (5,)) + assert_equal(y.ndim, 1) + assert_equal(y.strides, (4,)) + assert_equal(y.suboffsets, ()) + assert_equal(y.itemsize, 4) + + def test_export_simple_nd(self): + x = np.array([[1, 2], [3, 4]], dtype=np.float64) + y = memoryview(x) + assert_equal(y.format, 'd') + assert_equal(y.shape, (2, 2)) + assert_equal(y.ndim, 2) + assert_equal(y.strides, (16, 8)) + assert_equal(y.suboffsets, ()) + assert_equal(y.itemsize, 8) + + def test_export_discontiguous(self): + x = np.zeros((3, 3, 3), dtype=np.float32)[:, 0,:] + y = memoryview(x) + assert_equal(y.format, 'f') + assert_equal(y.shape, (3, 3)) + assert_equal(y.ndim, 2) + assert_equal(y.strides, (36, 4)) + assert_equal(y.suboffsets, ()) + assert_equal(y.itemsize, 4) + + def test_export_record(self): + dt = [('a', 'b'), + ('b', 'h'), + ('c', 'i'), + ('d', 'l'), + ('dx', 'q'), + ('e', 'B'), + ('f', 'H'), + ('g', 'I'), + ('h', 'L'), + ('hx', 'Q'), + ('i', np.single), + ('j', np.double), + ('k', np.longdouble), + ('ix', np.csingle), + ('jx', np.cdouble), + ('kx', np.clongdouble), + ('l', 'S4'), + ('m', 'U4'), + ('n', 'V3'), + ('o', '?'), + ('p', np.half), + ] + x = np.array( + [(1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, + b'aaaa', 'bbbb', b' ', True, 1.0)], + dtype=dt) + y = memoryview(x) + assert_equal(y.shape, (1,)) + assert_equal(y.ndim, 1) + assert_equal(y.suboffsets, ()) + + sz = sum([np.dtype(b).itemsize for a, b in dt]) + if np.dtype('l').itemsize == 4: + assert_equal(y.format, 'T{b:a:=h:b:i:c:l:d:q:dx:B:e:@H:f:=I:g:L:h:Q:hx:f:i:d:j:^g:k:=Zf:ix:Zd:jx:^Zg:kx:4s:l:=4w:m:3x:n:?:o:@e:p:}') + else: + assert_equal(y.format, 'T{b:a:=h:b:i:c:q:d:q:dx:B:e:@H:f:=I:g:Q:h:Q:hx:f:i:d:j:^g:k:=Zf:ix:Zd:jx:^Zg:kx:4s:l:=4w:m:3x:n:?:o:@e:p:}') + assert_equal(y.strides, (sz,)) + assert_equal(y.itemsize, sz) + + def test_export_subarray(self): + x = np.array(([[1, 2], [3, 4]],), dtype=[('a', ('i', (2, 2)))]) + y = memoryview(x) + assert_equal(y.format, 'T{(2,2)i:a:}') + assert_equal(y.shape, ()) + assert_equal(y.ndim, 0) + assert_equal(y.strides, ()) + assert_equal(y.suboffsets, ()) + assert_equal(y.itemsize, 16) + + def test_export_endian(self): + x = np.array([1, 2, 3], dtype='>i') + y = memoryview(x) + if sys.byteorder == 'little': + assert_equal(y.format, '>i') + else: + assert_equal(y.format, 'i') + + x = np.array([1, 2, 3], dtype=' np.array(0, dtype=dt1), "type %s failed" % (dt1,)) + assert_(not 1 < np.array(0, dtype=dt1), "type %s failed" % (dt1,)) + + for dt2 in np.typecodes['AllInteger']: + assert_(np.array(1, dtype=dt1) > np.array(0, dtype=dt2), + "type %s and %s failed" % (dt1, dt2)) + assert_(not np.array(1, dtype=dt1) < np.array(0, dtype=dt2), + "type %s and %s failed" % (dt1, dt2)) + + # Unsigned integers + for dt1 in 'BHILQP': + assert_(-1 < np.array(1, dtype=dt1), "type %s failed" % (dt1,)) + assert_(not -1 > np.array(1, dtype=dt1), "type %s failed" % (dt1,)) + assert_(-1 != np.array(1, dtype=dt1), "type %s failed" % (dt1,)) + + # Unsigned vs signed + for dt2 in 'bhilqp': + assert_(np.array(1, dtype=dt1) > np.array(-1, dtype=dt2), + "type %s and %s failed" % (dt1, dt2)) + assert_(not np.array(1, dtype=dt1) < np.array(-1, dtype=dt2), + "type %s and %s failed" % (dt1, dt2)) + assert_(np.array(1, dtype=dt1) != np.array(-1, dtype=dt2), + "type %s and %s failed" % (dt1, dt2)) + + # Signed integers and floats + for dt1 in 'bhlqp' + np.typecodes['Float']: + assert_(1 > np.array(-1, dtype=dt1), "type %s failed" % (dt1,)) + assert_(not 1 < np.array(-1, dtype=dt1), "type %s failed" % (dt1,)) + assert_(-1 == np.array(-1, dtype=dt1), "type %s failed" % (dt1,)) + + for dt2 in 'bhlqp' + np.typecodes['Float']: + assert_(np.array(1, dtype=dt1) > np.array(-1, dtype=dt2), + "type %s and %s failed" % (dt1, dt2)) + assert_(not np.array(1, dtype=dt1) < np.array(-1, dtype=dt2), + "type %s and %s failed" % (dt1, dt2)) + assert_(np.array(-1, dtype=dt1) == np.array(-1, dtype=dt2), + "type %s and %s failed" % (dt1, dt2)) + + def test_to_bool_scalar(self): + assert_equal(bool(np.array([False])), False) + assert_equal(bool(np.array([True])), True) + assert_equal(bool(np.array([[42]])), True) + assert_raises(ValueError, bool, np.array([1, 2])) + + class NotConvertible: + def __bool__(self): + raise NotImplementedError + + assert_raises(NotImplementedError, bool, np.array(NotConvertible())) + assert_raises(NotImplementedError, bool, np.array([NotConvertible()])) + if IS_PYSTON: + pytest.skip("Pyston disables recursion checking") + + self_containing = np.array([None]) + self_containing[0] = self_containing + + Error = RecursionError + + assert_raises(Error, bool, self_containing) # previously stack overflow + self_containing[0] = None # resolve circular reference + + def test_to_int_scalar(self): + # gh-9972 means that these aren't always the same + int_funcs = (int, lambda x: x.__int__()) + for int_func in int_funcs: + assert_equal(int_func(np.array(0)), 0) + with assert_warns(DeprecationWarning): + assert_equal(int_func(np.array([1])), 1) + with assert_warns(DeprecationWarning): + assert_equal(int_func(np.array([[42]])), 42) + assert_raises(TypeError, int_func, np.array([1, 2])) + + # gh-9972 + assert_equal(4, int_func(np.array('4'))) + assert_equal(5, int_func(np.bytes_(b'5'))) + assert_equal(6, int_func(np.str_('6'))) + + # The delegation of int() to __trunc__ was deprecated in + # Python 3.11. + if sys.version_info < (3, 11): + class HasTrunc: + def __trunc__(self): + return 3 + assert_equal(3, int_func(np.array(HasTrunc()))) + with assert_warns(DeprecationWarning): + assert_equal(3, int_func(np.array([HasTrunc()]))) + else: + pass + + class NotConvertible: + def __int__(self): + raise NotImplementedError + assert_raises(NotImplementedError, + int_func, np.array(NotConvertible())) + with assert_warns(DeprecationWarning): + assert_raises(NotImplementedError, + int_func, np.array([NotConvertible()])) + + +class TestWhere: + def test_basic(self): + dts = [bool, np.int16, np.int32, np.int64, np.double, np.complex128, + np.longdouble, np.clongdouble] + for dt in dts: + c = np.ones(53, dtype=bool) + assert_equal(np.where( c, dt(0), dt(1)), dt(0)) + assert_equal(np.where(~c, dt(0), dt(1)), dt(1)) + assert_equal(np.where(True, dt(0), dt(1)), dt(0)) + assert_equal(np.where(False, dt(0), dt(1)), dt(1)) + d = np.ones_like(c).astype(dt) + e = np.zeros_like(d) + r = d.astype(dt) + c[7] = False + r[7] = e[7] + assert_equal(np.where(c, e, e), e) + assert_equal(np.where(c, d, e), r) + assert_equal(np.where(c, d, e[0]), r) + assert_equal(np.where(c, d[0], e), r) + assert_equal(np.where(c[::2], d[::2], e[::2]), r[::2]) + assert_equal(np.where(c[1::2], d[1::2], e[1::2]), r[1::2]) + assert_equal(np.where(c[::3], d[::3], e[::3]), r[::3]) + assert_equal(np.where(c[1::3], d[1::3], e[1::3]), r[1::3]) + assert_equal(np.where(c[::-2], d[::-2], e[::-2]), r[::-2]) + assert_equal(np.where(c[::-3], d[::-3], e[::-3]), r[::-3]) + assert_equal(np.where(c[1::-3], d[1::-3], e[1::-3]), r[1::-3]) + + @pytest.mark.skipif(IS_WASM, reason="no wasm fp exception support") + def test_exotic(self): + # object + assert_array_equal(np.where(True, None, None), np.array(None)) + # zero sized + m = np.array([], dtype=bool).reshape(0, 3) + b = np.array([], dtype=np.float64).reshape(0, 3) + assert_array_equal(np.where(m, 0, b), np.array([]).reshape(0, 3)) + + # object cast + d = np.array([-1.34, -0.16, -0.54, -0.31, -0.08, -0.95, 0.000, 0.313, + 0.547, -0.18, 0.876, 0.236, 1.969, 0.310, 0.699, 1.013, + 1.267, 0.229, -1.39, 0.487]) + nan = float('NaN') + e = np.array(['5z', '0l', nan, 'Wz', nan, nan, 'Xq', 'cs', nan, nan, + 'QN', nan, nan, 'Fd', nan, nan, 'kp', nan, '36', 'i1'], + dtype=object) + m = np.array([0, 0, 1, 0, 1, 1, 0, 0, 1, 1, + 0, 1, 1, 0, 1, 1, 0, 1, 0, 0], dtype=bool) + + r = e[:] + r[np.where(m)] = d[np.where(m)] + assert_array_equal(np.where(m, d, e), r) + + r = e[:] + r[np.where(~m)] = d[np.where(~m)] + assert_array_equal(np.where(m, e, d), r) + + assert_array_equal(np.where(m, e, e), e) + + # minimal dtype result with NaN scalar (e.g required by pandas) + d = np.array([1., 2.], dtype=np.float32) + e = float('NaN') + assert_equal(np.where(True, d, e).dtype, np.float32) + e = float('Infinity') + assert_equal(np.where(True, d, e).dtype, np.float32) + e = float('-Infinity') + assert_equal(np.where(True, d, e).dtype, np.float32) + # With NEP 50 adopted, the float will overflow here: + e = float(1e150) + with pytest.warns(RuntimeWarning, match="overflow"): + res = np.where(True, d, e) + assert res.dtype == np.float32 + + def test_ndim(self): + c = [True, False] + a = np.zeros((2, 25)) + b = np.ones((2, 25)) + r = np.where(np.array(c)[:,np.newaxis], a, b) + assert_array_equal(r[0], a[0]) + assert_array_equal(r[1], b[0]) + + a = a.T + b = b.T + r = np.where(c, a, b) + assert_array_equal(r[:,0], a[:,0]) + assert_array_equal(r[:,1], b[:,0]) + + def test_dtype_mix(self): + c = np.array([False, True, False, False, False, False, True, False, + False, False, True, False]) + a = np.uint32(1) + b = np.array([5., 0., 3., 2., -1., -4., 0., -10., 10., 1., 0., 3.], + dtype=np.float64) + r = np.array([5., 1., 3., 2., -1., -4., 1., -10., 10., 1., 1., 3.], + dtype=np.float64) + assert_equal(np.where(c, a, b), r) + + a = a.astype(np.float32) + b = b.astype(np.int64) + assert_equal(np.where(c, a, b), r) + + # non bool mask + c = c.astype(int) + c[c != 0] = 34242324 + assert_equal(np.where(c, a, b), r) + # invert + tmpmask = c != 0 + c[c == 0] = 41247212 + c[tmpmask] = 0 + assert_equal(np.where(c, b, a), r) + + def test_foreign(self): + c = np.array([False, True, False, False, False, False, True, False, + False, False, True, False]) + r = np.array([5., 1., 3., 2., -1., -4., 1., -10., 10., 1., 1., 3.], + dtype=np.float64) + a = np.ones(1, dtype='>i4') + b = np.array([5., 0., 3., 2., -1., -4., 0., -10., 10., 1., 0., 3.], + dtype=np.float64) + assert_equal(np.where(c, a, b), r) + + b = b.astype('>f8') + assert_equal(np.where(c, a, b), r) + + a = a.astype('i4') + assert_equal(np.where(c, a, b), r) + + def test_error(self): + c = [True, True] + a = np.ones((4, 5)) + b = np.ones((5, 5)) + assert_raises(ValueError, np.where, c, a, a) + assert_raises(ValueError, np.where, c[0], a, b) + + def test_string(self): + # gh-4778 check strings are properly filled with nulls + a = np.array("abc") + b = np.array("x" * 753) + assert_equal(np.where(True, a, b), "abc") + assert_equal(np.where(False, b, a), "abc") + + # check native datatype sized strings + a = np.array("abcd") + b = np.array("x" * 8) + assert_equal(np.where(True, a, b), "abcd") + assert_equal(np.where(False, b, a), "abcd") + + def test_empty_result(self): + # pass empty where result through an assignment which reads the data of + # empty arrays, error detectable with valgrind, see gh-8922 + x = np.zeros((1, 1)) + ibad = np.vstack(np.where(x == 99.)) + assert_array_equal(ibad, + np.atleast_2d(np.array([[],[]], dtype=np.intp))) + + def test_largedim(self): + # invalid read regression gh-9304 + shape = [10, 2, 3, 4, 5, 6] + np.random.seed(2) + array = np.random.rand(*shape) + + for i in range(10): + benchmark = array.nonzero() + result = array.nonzero() + assert_array_equal(benchmark, result) + + def test_kwargs(self): + a = np.zeros(1) + with assert_raises(TypeError): + np.where(a, x=a, y=a) + + +if not IS_PYPY: + # sys.getsizeof() is not valid on PyPy + class TestSizeOf: + + def test_empty_array(self): + x = np.array([]) + assert_(sys.getsizeof(x) > 0) + + def check_array(self, dtype): + elem_size = dtype(0).itemsize + + for length in [10, 50, 100, 500]: + x = np.arange(length, dtype=dtype) + assert_(sys.getsizeof(x) > length * elem_size) + + def test_array_int32(self): + self.check_array(np.int32) + + def test_array_int64(self): + self.check_array(np.int64) + + def test_array_float32(self): + self.check_array(np.float32) + + def test_array_float64(self): + self.check_array(np.float64) + + def test_view(self): + d = np.ones(100) + assert_(sys.getsizeof(d[...]) < sys.getsizeof(d)) + + def test_reshape(self): + d = np.ones(100) + assert_(sys.getsizeof(d) < sys.getsizeof(d.reshape(100, 1, 1).copy())) + + @_no_tracing + def test_resize(self): + d = np.ones(100) + old = sys.getsizeof(d) + d.resize(50) + assert_(old > sys.getsizeof(d)) + d.resize(150) + assert_(old < sys.getsizeof(d)) + + def test_error(self): + d = np.ones(100) + assert_raises(TypeError, d.__sizeof__, "a") + + +class TestHashing: + + def test_arrays_not_hashable(self): + x = np.ones(3) + assert_raises(TypeError, hash, x) + + def test_collections_hashable(self): + x = np.array([]) + assert_(not isinstance(x, collections.abc.Hashable)) + + +class TestArrayPriority: + # This will go away when __array_priority__ is settled, meanwhile + # it serves to check unintended changes. + op = operator + binary_ops = [ + op.pow, op.add, op.sub, op.mul, op.floordiv, op.truediv, op.mod, + op.and_, op.or_, op.xor, op.lshift, op.rshift, op.mod, op.gt, + op.ge, op.lt, op.le, op.ne, op.eq + ] + + class Foo(np.ndarray): + __array_priority__ = 100. + + def __new__(cls, *args, **kwargs): + return np.array(*args, **kwargs).view(cls) + + class Bar(np.ndarray): + __array_priority__ = 101. + + def __new__(cls, *args, **kwargs): + return np.array(*args, **kwargs).view(cls) + + class Other: + __array_priority__ = 1000. + + def _all(self, other): + return self.__class__() + + __add__ = __radd__ = _all + __sub__ = __rsub__ = _all + __mul__ = __rmul__ = _all + __pow__ = __rpow__ = _all + __div__ = __rdiv__ = _all + __mod__ = __rmod__ = _all + __truediv__ = __rtruediv__ = _all + __floordiv__ = __rfloordiv__ = _all + __and__ = __rand__ = _all + __xor__ = __rxor__ = _all + __or__ = __ror__ = _all + __lshift__ = __rlshift__ = _all + __rshift__ = __rrshift__ = _all + __eq__ = _all + __ne__ = _all + __gt__ = _all + __ge__ = _all + __lt__ = _all + __le__ = _all + + def test_ndarray_subclass(self): + a = np.array([1, 2]) + b = self.Bar([1, 2]) + for f in self.binary_ops: + msg = repr(f) + assert_(isinstance(f(a, b), self.Bar), msg) + assert_(isinstance(f(b, a), self.Bar), msg) + + def test_ndarray_other(self): + a = np.array([1, 2]) + b = self.Other() + for f in self.binary_ops: + msg = repr(f) + assert_(isinstance(f(a, b), self.Other), msg) + assert_(isinstance(f(b, a), self.Other), msg) + + def test_subclass_subclass(self): + a = self.Foo([1, 2]) + b = self.Bar([1, 2]) + for f in self.binary_ops: + msg = repr(f) + assert_(isinstance(f(a, b), self.Bar), msg) + assert_(isinstance(f(b, a), self.Bar), msg) + + def test_subclass_other(self): + a = self.Foo([1, 2]) + b = self.Other() + for f in self.binary_ops: + msg = repr(f) + assert_(isinstance(f(a, b), self.Other), msg) + assert_(isinstance(f(b, a), self.Other), msg) + + +class TestBytestringArrayNonzero: + + def test_empty_bstring_array_is_falsey(self): + assert_(not np.array([''], dtype=str)) + + def test_whitespace_bstring_array_is_truthy(self): + a = np.array(['spam'], dtype=str) + a[0] = ' \0\0' + assert_(a) + + def test_all_null_bstring_array_is_falsey(self): + a = np.array(['spam'], dtype=str) + a[0] = '\0\0\0\0' + assert_(not a) + + def test_null_inside_bstring_array_is_truthy(self): + a = np.array(['spam'], dtype=str) + a[0] = ' \0 \0' + assert_(a) + + +class TestUnicodeEncoding: + """ + Tests for encoding related bugs, such as UCS2 vs UCS4, round-tripping + issues, etc + """ + def test_round_trip(self): + """ Tests that GETITEM, SETITEM, and PyArray_Scalar roundtrip """ + # gh-15363 + arr = np.zeros(shape=(), dtype="U1") + for i in range(1, sys.maxunicode + 1): + expected = chr(i) + arr[()] = expected + assert arr[()] == expected + assert arr.item() == expected + + def test_assign_scalar(self): + # gh-3258 + l = np.array(['aa', 'bb']) + l[:] = np.str_('cc') + assert_equal(l, ['cc', 'cc']) + + def test_fill_scalar(self): + # gh-7227 + l = np.array(['aa', 'bb']) + l.fill(np.str_('cc')) + assert_equal(l, ['cc', 'cc']) + + +class TestUnicodeArrayNonzero: + + def test_empty_ustring_array_is_falsey(self): + assert_(not np.array([''], dtype=np.str_)) + + def test_whitespace_ustring_array_is_truthy(self): + a = np.array(['eggs'], dtype=np.str_) + a[0] = ' \0\0' + assert_(a) + + def test_all_null_ustring_array_is_falsey(self): + a = np.array(['eggs'], dtype=np.str_) + a[0] = '\0\0\0\0' + assert_(not a) + + def test_null_inside_ustring_array_is_truthy(self): + a = np.array(['eggs'], dtype=np.str_) + a[0] = ' \0 \0' + assert_(a) + + +class TestFormat: + + def test_0d(self): + a = np.array(np.pi) + assert_equal('{:0.3g}'.format(a), '3.14') + assert_equal('{:0.3g}'.format(a[()]), '3.14') + + def test_1d_no_format(self): + a = np.array([np.pi]) + assert_equal('{}'.format(a), str(a)) + + def test_1d_format(self): + # until gh-5543, ensure that the behaviour matches what it used to be + a = np.array([np.pi]) + assert_raises(TypeError, '{:30}'.format, a) + + +from numpy.testing import IS_PYPY + + +class TestCTypes: + + def test_ctypes_is_available(self): + test_arr = np.array([[1, 2, 3], [4, 5, 6]]) + + assert_equal(ctypes, test_arr.ctypes._ctypes) + assert_equal(tuple(test_arr.ctypes.shape), (2, 3)) + + def test_ctypes_is_not_available(self): + from numpy._core import _internal + _internal.ctypes = None + try: + test_arr = np.array([[1, 2, 3], [4, 5, 6]]) + + assert_(isinstance(test_arr.ctypes._ctypes, + _internal._missing_ctypes)) + assert_equal(tuple(test_arr.ctypes.shape), (2, 3)) + finally: + _internal.ctypes = ctypes + + def _make_readonly(x): + x.flags.writeable = False + return x + + @pytest.mark.parametrize('arr', [ + np.array([1, 2, 3]), + np.array([['one', 'two'], ['three', 'four']]), + np.array((1, 2), dtype='i4,i4'), + np.zeros((2,), dtype= + np.dtype(dict( + formats=['2, [44, 55]) + assert_equal(a, np.array([[0, 44], [1, 55], [2, 44]])) + # hit one of the failing paths + assert_raises(ValueError, np.place, a, a>20, []) + + def test_put_noncontiguous(self): + a = np.arange(6).reshape(2, 3).T # force non-c-contiguous + np.put(a, [0, 2], [44, 55]) + assert_equal(a, np.array([[44, 3], [55, 4], [2, 5]])) + + def test_putmask_noncontiguous(self): + a = np.arange(6).reshape(2, 3).T # force non-c-contiguous + # uses arr_putmask + np.putmask(a, a>2, a**2) + assert_equal(a, np.array([[0, 9], [1, 16], [2, 25]])) + + def test_take_mode_raise(self): + a = np.arange(6, dtype='int') + out = np.empty(2, dtype='int') + np.take(a, [0, 2], out=out, mode='raise') + assert_equal(out, np.array([0, 2])) + + def test_choose_mod_raise(self): + a = np.array([[1, 0, 1], [0, 1, 0], [1, 0, 1]]) + out = np.empty((3,3), dtype='int') + choices = [-10, 10] + np.choose(a, choices, out=out, mode='raise') + assert_equal(out, np.array([[ 10, -10, 10], + [-10, 10, -10], + [ 10, -10, 10]])) + + def test_flatiter__array__(self): + a = np.arange(9).reshape(3, 3) + b = a.T.flat + c = b.__array__() + # triggers the WRITEBACKIFCOPY resolution, assuming refcount semantics + del c + + def test_dot_out(self): + # if HAVE_CBLAS, will use WRITEBACKIFCOPY + a = np.arange(9, dtype=float).reshape(3, 3) + b = np.dot(a, a, out=a) + assert_equal(b, np.array([[15, 18, 21], [42, 54, 66], [69, 90, 111]])) + + def test_view_assign(self): + from numpy._core._multiarray_tests import ( + npy_create_writebackifcopy, npy_resolve + ) + + arr = np.arange(9).reshape(3, 3).T + arr_wb = npy_create_writebackifcopy(arr) + assert_(arr_wb.flags.writebackifcopy) + assert_(arr_wb.base is arr) + arr_wb[...] = -100 + npy_resolve(arr_wb) + # arr changes after resolve, even though we assigned to arr_wb + assert_equal(arr, -100) + # after resolve, the two arrays no longer reference each other + assert_(arr_wb.ctypes.data != 0) + assert_equal(arr_wb.base, None) + # assigning to arr_wb does not get transferred to arr + arr_wb[...] = 100 + assert_equal(arr, -100) + + @pytest.mark.leaks_references( + reason="increments self in dealloc; ignore since deprecated path.") + def test_dealloc_warning(self): + with suppress_warnings() as sup: + sup.record(RuntimeWarning) + arr = np.arange(9).reshape(3, 3) + v = arr.T + _multiarray_tests.npy_abuse_writebackifcopy(v) + assert len(sup.log) == 1 + + def test_view_discard_refcount(self): + from numpy._core._multiarray_tests import ( + npy_create_writebackifcopy, npy_discard + ) + + arr = np.arange(9).reshape(3, 3).T + orig = arr.copy() + if HAS_REFCOUNT: + arr_cnt = sys.getrefcount(arr) + arr_wb = npy_create_writebackifcopy(arr) + assert_(arr_wb.flags.writebackifcopy) + assert_(arr_wb.base is arr) + arr_wb[...] = -100 + npy_discard(arr_wb) + # arr remains unchanged after discard + assert_equal(arr, orig) + # after discard, the two arrays no longer reference each other + assert_(arr_wb.ctypes.data != 0) + assert_equal(arr_wb.base, None) + if HAS_REFCOUNT: + assert_equal(arr_cnt, sys.getrefcount(arr)) + # assigning to arr_wb does not get transferred to arr + arr_wb[...] = 100 + assert_equal(arr, orig) + + +class TestArange: + def test_infinite(self): + assert_raises_regex( + ValueError, "size exceeded", + np.arange, 0, np.inf + ) + + def test_nan_step(self): + assert_raises_regex( + ValueError, "cannot compute length", + np.arange, 0, 1, np.nan + ) + + def test_zero_step(self): + assert_raises(ZeroDivisionError, np.arange, 0, 10, 0) + assert_raises(ZeroDivisionError, np.arange, 0.0, 10.0, 0.0) + + # empty range + assert_raises(ZeroDivisionError, np.arange, 0, 0, 0) + assert_raises(ZeroDivisionError, np.arange, 0.0, 0.0, 0.0) + + def test_require_range(self): + assert_raises(TypeError, np.arange) + assert_raises(TypeError, np.arange, step=3) + assert_raises(TypeError, np.arange, dtype='int64') + assert_raises(TypeError, np.arange, start=4) + + def test_start_stop_kwarg(self): + keyword_stop = np.arange(stop=3) + keyword_zerotostop = np.arange(0, stop=3) + keyword_start_stop = np.arange(start=3, stop=9) + + assert len(keyword_stop) == 3 + assert len(keyword_zerotostop) == 3 + assert len(keyword_start_stop) == 6 + assert_array_equal(keyword_stop, keyword_zerotostop) + + def test_arange_booleans(self): + # Arange makes some sense for booleans and works up to length 2. + # But it is weird since `arange(2, 4, dtype=bool)` works. + # Arguably, much or all of this could be deprecated/removed. + res = np.arange(False, dtype=bool) + assert_array_equal(res, np.array([], dtype="bool")) + + res = np.arange(True, dtype="bool") + assert_array_equal(res, [False]) + + res = np.arange(2, dtype="bool") + assert_array_equal(res, [False, True]) + + # This case is especially weird, but drops out without special case: + res = np.arange(6, 8, dtype="bool") + assert_array_equal(res, [True, True]) + + with pytest.raises(TypeError): + np.arange(3, dtype="bool") + + @pytest.mark.parametrize("dtype", ["S3", "U", "5i"]) + def test_rejects_bad_dtypes(self, dtype): + dtype = np.dtype(dtype) + DType_name = re.escape(str(type(dtype))) + with pytest.raises(TypeError, + match=rf"arange\(\) not supported for inputs .* {DType_name}"): + np.arange(2, dtype=dtype) + + def test_rejects_strings(self): + # Explicitly test error for strings which may call "b" - "a": + DType_name = re.escape(str(type(np.array("a").dtype))) + with pytest.raises(TypeError, + match=rf"arange\(\) not supported for inputs .* {DType_name}"): + np.arange("a", "b") + + def test_byteswapped(self): + res_be = np.arange(1, 1000, dtype=">i4") + res_le = np.arange(1, 1000, dtype="i4" + assert res_le.dtype == " arr2 + + +@pytest.mark.parametrize("op", [ + operator.eq, operator.ne, operator.le, operator.lt, operator.ge, + operator.gt]) +def test_comparisons_forwards_error(op): + class NotArray: + def __array__(self, dtype=None, copy=None): + raise TypeError("run you fools") + + with pytest.raises(TypeError, match="run you fools"): + op(np.arange(2), NotArray()) + + with pytest.raises(TypeError, match="run you fools"): + op(NotArray(), np.arange(2)) + + +def test_richcompare_scalar_boolean_singleton_return(): + # These are currently guaranteed to be the boolean singletons, but maybe + # returning NumPy booleans would also be OK: + assert (np.array(0) == "a") is False + assert (np.array(0) != "a") is True + assert (np.int16(0) == "a") is False + assert (np.int16(0) != "a") is True + + +@pytest.mark.parametrize("op", [ + operator.eq, operator.ne, operator.le, operator.lt, operator.ge, + operator.gt]) +def test_ragged_comparison_fails(op): + # This needs to convert the internal array to True/False, which fails: + a = np.array([1, np.array([1, 2, 3])], dtype=object) + b = np.array([1, np.array([1, 2, 3])], dtype=object) + + with pytest.raises(ValueError, match="The truth value.*ambiguous"): + op(a, b) + + +@pytest.mark.parametrize( + ["fun", "npfun"], + [ + (_multiarray_tests.npy_cabs, np.absolute), + (_multiarray_tests.npy_carg, np.angle) + ] +) +@pytest.mark.parametrize("x", [1, np.inf, -np.inf, np.nan]) +@pytest.mark.parametrize("y", [1, np.inf, -np.inf, np.nan]) +@pytest.mark.parametrize("test_dtype", np.complexfloating.__subclasses__()) +def test_npymath_complex(fun, npfun, x, y, test_dtype): + # Smoketest npymath functions + z = test_dtype(complex(x, y)) + with np.errstate(invalid='ignore'): + # Fallback implementations may emit a warning for +-inf (see gh-24876): + # RuntimeWarning: invalid value encountered in absolute + got = fun(z) + expected = npfun(z) + assert_allclose(got, expected) + + +def test_npymath_real(): + # Smoketest npymath functions + from numpy._core._multiarray_tests import ( + npy_log10, npy_cosh, npy_sinh, npy_tan, npy_tanh) + + funcs = {npy_log10: np.log10, + npy_cosh: np.cosh, + npy_sinh: np.sinh, + npy_tan: np.tan, + npy_tanh: np.tanh} + vals = (1, np.inf, -np.inf, np.nan) + types = (np.float32, np.float64, np.longdouble) + + with np.errstate(all='ignore'): + for fun, npfun in funcs.items(): + for x, t in itertools.product(vals, types): + z = t(x) + got = fun(z) + expected = npfun(z) + assert_allclose(got, expected) + +def test_uintalignment_and_alignment(): + # alignment code needs to satisfy these requirements: + # 1. numpy structs match C struct layout + # 2. ufuncs/casting is safe wrt to aligned access + # 3. copy code is safe wrt to "uint alidned" access + # + # Complex types are the main problem, whose alignment may not be the same + # as their "uint alignment". + # + # This test might only fail on certain platforms, where uint64 alignment is + # not equal to complex64 alignment. The second 2 tests will only fail + # for DEBUG=1. + + d1 = np.dtype('u1,c8', align=True) + d2 = np.dtype('u4,c8', align=True) + d3 = np.dtype({'names': ['a', 'b'], 'formats': ['u1', d1]}, align=True) + + assert_equal(np.zeros(1, dtype=d1)['f1'].flags['ALIGNED'], True) + assert_equal(np.zeros(1, dtype=d2)['f1'].flags['ALIGNED'], True) + assert_equal(np.zeros(1, dtype='u1,c8')['f1'].flags['ALIGNED'], False) + + # check that C struct matches numpy struct size + s = _multiarray_tests.get_struct_alignments() + for d, (alignment, size) in zip([d1,d2,d3], s): + assert_equal(d.alignment, alignment) + assert_equal(d.itemsize, size) + + # check that ufuncs don't complain in debug mode + # (this is probably OK if the aligned flag is true above) + src = np.zeros((2,2), dtype=d1)['f1'] # 4-byte aligned, often + np.exp(src) # assert fails? + + # check that copy code doesn't complain in debug mode + dst = np.zeros((2,2), dtype='c8') + dst[:,1] = src[:,1] # assert in lowlevel_strided_loops fails? + +class TestAlignment: + # adapted from scipy._lib.tests.test__util.test__aligned_zeros + # Checks that unusual memory alignments don't trip up numpy. + + def check(self, shape, dtype, order, align): + err_msg = repr((shape, dtype, order, align)) + x = _aligned_zeros(shape, dtype, order, align=align) + if align is None: + align = np.dtype(dtype).alignment + assert_equal(x.__array_interface__['data'][0] % align, 0) + if hasattr(shape, '__len__'): + assert_equal(x.shape, shape, err_msg) + else: + assert_equal(x.shape, (shape,), err_msg) + assert_equal(x.dtype, dtype) + if order == "C": + assert_(x.flags.c_contiguous, err_msg) + elif order == "F": + if x.size > 0: + assert_(x.flags.f_contiguous, err_msg) + elif order is None: + assert_(x.flags.c_contiguous, err_msg) + else: + raise ValueError() + + def test_various_alignments(self): + for align in [1, 2, 3, 4, 8, 12, 16, 32, 64, None]: + for n in [0, 1, 3, 11]: + for order in ["C", "F", None]: + for dtype in list(np.typecodes["All"]) + ['i4,i4,i4']: + if dtype == 'O': + # object dtype can't be misaligned + continue + for shape in [n, (1, 2, 3, n)]: + self.check(shape, np.dtype(dtype), order, align) + + def test_strided_loop_alignments(self): + # particularly test that complex64 and float128 use right alignment + # code-paths, since these are particularly problematic. It is useful to + # turn on USE_DEBUG for this test, so lowlevel-loop asserts are run. + for align in [1, 2, 4, 8, 12, 16, None]: + xf64 = _aligned_zeros(3, np.float64) + + xc64 = _aligned_zeros(3, np.complex64, align=align) + xf128 = _aligned_zeros(3, np.longdouble, align=align) + + # test casting, both to and from misaligned + with suppress_warnings() as sup: + sup.filter(ComplexWarning, "Casting complex values") + xc64.astype('f8') + xf64.astype(np.complex64) + test = xc64 + xf64 + + xf128.astype('f8') + xf64.astype(np.longdouble) + test = xf128 + xf64 + + test = xf128 + xc64 + + # test copy, both to and from misaligned + # contig copy + xf64[:] = xf64.copy() + xc64[:] = xc64.copy() + xf128[:] = xf128.copy() + # strided copy + xf64[::2] = xf64[::2].copy() + xc64[::2] = xc64[::2].copy() + xf128[::2] = xf128[::2].copy() + +def test_getfield(): + a = np.arange(32, dtype='uint16') + if sys.byteorder == 'little': + i = 0 + j = 1 + else: + i = 1 + j = 0 + b = a.getfield('int8', i) + assert_equal(b, a) + b = a.getfield('int8', j) + assert_equal(b, 0) + pytest.raises(ValueError, a.getfield, 'uint8', -1) + pytest.raises(ValueError, a.getfield, 'uint8', 16) + pytest.raises(ValueError, a.getfield, 'uint64', 0) + + +class TestViewDtype: + """ + Verify that making a view of a non-contiguous array works as expected. + """ + def test_smaller_dtype_multiple(self): + # x is non-contiguous + x = np.arange(10, dtype=' rc_a) + assert_(sys.getrefcount(dt) > rc_dt) + # del 'it' + it = None + assert_equal(sys.getrefcount(a), rc_a) + assert_equal(sys.getrefcount(dt), rc_dt) + + # With a copy + a = arange(6, dtype='f4') + dt = np.dtype('f4') + rc_a = sys.getrefcount(a) + rc_dt = sys.getrefcount(dt) + it = nditer(a, [], + [['readwrite']], + op_dtypes=[dt]) + rc2_a = sys.getrefcount(a) + rc2_dt = sys.getrefcount(dt) + it2 = it.copy() + assert_(sys.getrefcount(a) > rc2_a) + assert_(sys.getrefcount(dt) > rc2_dt) + it = None + assert_equal(sys.getrefcount(a), rc2_a) + assert_equal(sys.getrefcount(dt), rc2_dt) + it2 = None + assert_equal(sys.getrefcount(a), rc_a) + assert_equal(sys.getrefcount(dt), rc_dt) + + del it2 # avoid pyflakes unused variable warning + +def test_iter_best_order(): + # The iterator should always find the iteration order + # with increasing memory addresses + + # Test the ordering for 1-D to 5-D shapes + for shape in [(5,), (3, 4), (2, 3, 4), (2, 3, 4, 3), (2, 3, 2, 2, 3)]: + a = arange(np.prod(shape)) + # Test each combination of positive and negative strides + for dirs in range(2**len(shape)): + dirs_index = [slice(None)]*len(shape) + for bit in range(len(shape)): + if ((2**bit) & dirs): + dirs_index[bit] = slice(None, None, -1) + dirs_index = tuple(dirs_index) + + aview = a.reshape(shape)[dirs_index] + # C-order + i = nditer(aview, [], [['readonly']]) + assert_equal([x for x in i], a) + # Fortran-order + i = nditer(aview.T, [], [['readonly']]) + assert_equal([x for x in i], a) + # Other order + if len(shape) > 2: + i = nditer(aview.swapaxes(0, 1), [], [['readonly']]) + assert_equal([x for x in i], a) + +def test_iter_c_order(): + # Test forcing C order + + # Test the ordering for 1-D to 5-D shapes + for shape in [(5,), (3, 4), (2, 3, 4), (2, 3, 4, 3), (2, 3, 2, 2, 3)]: + a = arange(np.prod(shape)) + # Test each combination of positive and negative strides + for dirs in range(2**len(shape)): + dirs_index = [slice(None)]*len(shape) + for bit in range(len(shape)): + if ((2**bit) & dirs): + dirs_index[bit] = slice(None, None, -1) + dirs_index = tuple(dirs_index) + + aview = a.reshape(shape)[dirs_index] + # C-order + i = nditer(aview, order='C') + assert_equal([x for x in i], aview.ravel(order='C')) + # Fortran-order + i = nditer(aview.T, order='C') + assert_equal([x for x in i], aview.T.ravel(order='C')) + # Other order + if len(shape) > 2: + i = nditer(aview.swapaxes(0, 1), order='C') + assert_equal([x for x in i], + aview.swapaxes(0, 1).ravel(order='C')) + +def test_iter_f_order(): + # Test forcing F order + + # Test the ordering for 1-D to 5-D shapes + for shape in [(5,), (3, 4), (2, 3, 4), (2, 3, 4, 3), (2, 3, 2, 2, 3)]: + a = arange(np.prod(shape)) + # Test each combination of positive and negative strides + for dirs in range(2**len(shape)): + dirs_index = [slice(None)]*len(shape) + for bit in range(len(shape)): + if ((2**bit) & dirs): + dirs_index[bit] = slice(None, None, -1) + dirs_index = tuple(dirs_index) + + aview = a.reshape(shape)[dirs_index] + # C-order + i = nditer(aview, order='F') + assert_equal([x for x in i], aview.ravel(order='F')) + # Fortran-order + i = nditer(aview.T, order='F') + assert_equal([x for x in i], aview.T.ravel(order='F')) + # Other order + if len(shape) > 2: + i = nditer(aview.swapaxes(0, 1), order='F') + assert_equal([x for x in i], + aview.swapaxes(0, 1).ravel(order='F')) + +def test_iter_c_or_f_order(): + # Test forcing any contiguous (C or F) order + + # Test the ordering for 1-D to 5-D shapes + for shape in [(5,), (3, 4), (2, 3, 4), (2, 3, 4, 3), (2, 3, 2, 2, 3)]: + a = arange(np.prod(shape)) + # Test each combination of positive and negative strides + for dirs in range(2**len(shape)): + dirs_index = [slice(None)]*len(shape) + for bit in range(len(shape)): + if ((2**bit) & dirs): + dirs_index[bit] = slice(None, None, -1) + dirs_index = tuple(dirs_index) + + aview = a.reshape(shape)[dirs_index] + # C-order + i = nditer(aview, order='A') + assert_equal([x for x in i], aview.ravel(order='A')) + # Fortran-order + i = nditer(aview.T, order='A') + assert_equal([x for x in i], aview.T.ravel(order='A')) + # Other order + if len(shape) > 2: + i = nditer(aview.swapaxes(0, 1), order='A') + assert_equal([x for x in i], + aview.swapaxes(0, 1).ravel(order='A')) + +def test_nditer_multi_index_set(): + # Test the multi_index set + a = np.arange(6).reshape(2, 3) + it = np.nditer(a, flags=['multi_index']) + + # Removes the iteration on two first elements of a[0] + it.multi_index = (0, 2,) + + assert_equal([i for i in it], [2, 3, 4, 5]) + +@pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") +def test_nditer_multi_index_set_refcount(): + # Test if the reference count on index variable is decreased + + index = 0 + i = np.nditer(np.array([111, 222, 333, 444]), flags=['multi_index']) + + start_count = sys.getrefcount(index) + i.multi_index = (index,) + end_count = sys.getrefcount(index) + + assert_equal(start_count, end_count) + +def test_iter_best_order_multi_index_1d(): + # The multi-indices should be correct with any reordering + + a = arange(4) + # 1D order + i = nditer(a, ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(0,), (1,), (2,), (3,)]) + # 1D reversed order + i = nditer(a[::-1], ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(3,), (2,), (1,), (0,)]) + +def test_iter_best_order_multi_index_2d(): + # The multi-indices should be correct with any reordering + + a = arange(6) + # 2D C-order + i = nditer(a.reshape(2, 3), ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(0, 0), (0, 1), (0, 2), (1, 0), (1, 1), (1, 2)]) + # 2D Fortran-order + i = nditer(a.reshape(2, 3).copy(order='F'), ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(0, 0), (1, 0), (0, 1), (1, 1), (0, 2), (1, 2)]) + # 2D reversed C-order + i = nditer(a.reshape(2, 3)[::-1], ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(1, 0), (1, 1), (1, 2), (0, 0), (0, 1), (0, 2)]) + i = nditer(a.reshape(2, 3)[:, ::-1], ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(0, 2), (0, 1), (0, 0), (1, 2), (1, 1), (1, 0)]) + i = nditer(a.reshape(2, 3)[::-1, ::-1], ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(1, 2), (1, 1), (1, 0), (0, 2), (0, 1), (0, 0)]) + # 2D reversed Fortran-order + i = nditer(a.reshape(2, 3).copy(order='F')[::-1], ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(1, 0), (0, 0), (1, 1), (0, 1), (1, 2), (0, 2)]) + i = nditer(a.reshape(2, 3).copy(order='F')[:, ::-1], + ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(0, 2), (1, 2), (0, 1), (1, 1), (0, 0), (1, 0)]) + i = nditer(a.reshape(2, 3).copy(order='F')[::-1, ::-1], + ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), [(1, 2), (0, 2), (1, 1), (0, 1), (1, 0), (0, 0)]) + +def test_iter_best_order_multi_index_3d(): + # The multi-indices should be correct with any reordering + + a = arange(12) + # 3D C-order + i = nditer(a.reshape(2, 3, 2), ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), + [(0, 0, 0), (0, 0, 1), (0, 1, 0), (0, 1, 1), (0, 2, 0), (0, 2, 1), + (1, 0, 0), (1, 0, 1), (1, 1, 0), (1, 1, 1), (1, 2, 0), (1, 2, 1)]) + # 3D Fortran-order + i = nditer(a.reshape(2, 3, 2).copy(order='F'), ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), + [(0, 0, 0), (1, 0, 0), (0, 1, 0), (1, 1, 0), (0, 2, 0), (1, 2, 0), + (0, 0, 1), (1, 0, 1), (0, 1, 1), (1, 1, 1), (0, 2, 1), (1, 2, 1)]) + # 3D reversed C-order + i = nditer(a.reshape(2, 3, 2)[::-1], ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), + [(1, 0, 0), (1, 0, 1), (1, 1, 0), (1, 1, 1), (1, 2, 0), (1, 2, 1), + (0, 0, 0), (0, 0, 1), (0, 1, 0), (0, 1, 1), (0, 2, 0), (0, 2, 1)]) + i = nditer(a.reshape(2, 3, 2)[:, ::-1], ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), + [(0, 2, 0), (0, 2, 1), (0, 1, 0), (0, 1, 1), (0, 0, 0), (0, 0, 1), + (1, 2, 0), (1, 2, 1), (1, 1, 0), (1, 1, 1), (1, 0, 0), (1, 0, 1)]) + i = nditer(a.reshape(2, 3, 2)[:,:, ::-1], ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), + [(0, 0, 1), (0, 0, 0), (0, 1, 1), (0, 1, 0), (0, 2, 1), (0, 2, 0), + (1, 0, 1), (1, 0, 0), (1, 1, 1), (1, 1, 0), (1, 2, 1), (1, 2, 0)]) + # 3D reversed Fortran-order + i = nditer(a.reshape(2, 3, 2).copy(order='F')[::-1], + ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), + [(1, 0, 0), (0, 0, 0), (1, 1, 0), (0, 1, 0), (1, 2, 0), (0, 2, 0), + (1, 0, 1), (0, 0, 1), (1, 1, 1), (0, 1, 1), (1, 2, 1), (0, 2, 1)]) + i = nditer(a.reshape(2, 3, 2).copy(order='F')[:, ::-1], + ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), + [(0, 2, 0), (1, 2, 0), (0, 1, 0), (1, 1, 0), (0, 0, 0), (1, 0, 0), + (0, 2, 1), (1, 2, 1), (0, 1, 1), (1, 1, 1), (0, 0, 1), (1, 0, 1)]) + i = nditer(a.reshape(2, 3, 2).copy(order='F')[:,:, ::-1], + ['multi_index'], [['readonly']]) + assert_equal(iter_multi_index(i), + [(0, 0, 1), (1, 0, 1), (0, 1, 1), (1, 1, 1), (0, 2, 1), (1, 2, 1), + (0, 0, 0), (1, 0, 0), (0, 1, 0), (1, 1, 0), (0, 2, 0), (1, 2, 0)]) + +def test_iter_best_order_c_index_1d(): + # The C index should be correct with any reordering + + a = arange(4) + # 1D order + i = nditer(a, ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [0, 1, 2, 3]) + # 1D reversed order + i = nditer(a[::-1], ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [3, 2, 1, 0]) + +def test_iter_best_order_c_index_2d(): + # The C index should be correct with any reordering + + a = arange(6) + # 2D C-order + i = nditer(a.reshape(2, 3), ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [0, 1, 2, 3, 4, 5]) + # 2D Fortran-order + i = nditer(a.reshape(2, 3).copy(order='F'), + ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [0, 3, 1, 4, 2, 5]) + # 2D reversed C-order + i = nditer(a.reshape(2, 3)[::-1], ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [3, 4, 5, 0, 1, 2]) + i = nditer(a.reshape(2, 3)[:, ::-1], ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [2, 1, 0, 5, 4, 3]) + i = nditer(a.reshape(2, 3)[::-1, ::-1], ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [5, 4, 3, 2, 1, 0]) + # 2D reversed Fortran-order + i = nditer(a.reshape(2, 3).copy(order='F')[::-1], + ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [3, 0, 4, 1, 5, 2]) + i = nditer(a.reshape(2, 3).copy(order='F')[:, ::-1], + ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [2, 5, 1, 4, 0, 3]) + i = nditer(a.reshape(2, 3).copy(order='F')[::-1, ::-1], + ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), [5, 2, 4, 1, 3, 0]) + +def test_iter_best_order_c_index_3d(): + # The C index should be correct with any reordering + + a = arange(12) + # 3D C-order + i = nditer(a.reshape(2, 3, 2), ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), + [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11]) + # 3D Fortran-order + i = nditer(a.reshape(2, 3, 2).copy(order='F'), + ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), + [0, 6, 2, 8, 4, 10, 1, 7, 3, 9, 5, 11]) + # 3D reversed C-order + i = nditer(a.reshape(2, 3, 2)[::-1], ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), + [6, 7, 8, 9, 10, 11, 0, 1, 2, 3, 4, 5]) + i = nditer(a.reshape(2, 3, 2)[:, ::-1], ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), + [4, 5, 2, 3, 0, 1, 10, 11, 8, 9, 6, 7]) + i = nditer(a.reshape(2, 3, 2)[:,:, ::-1], ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), + [1, 0, 3, 2, 5, 4, 7, 6, 9, 8, 11, 10]) + # 3D reversed Fortran-order + i = nditer(a.reshape(2, 3, 2).copy(order='F')[::-1], + ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), + [6, 0, 8, 2, 10, 4, 7, 1, 9, 3, 11, 5]) + i = nditer(a.reshape(2, 3, 2).copy(order='F')[:, ::-1], + ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), + [4, 10, 2, 8, 0, 6, 5, 11, 3, 9, 1, 7]) + i = nditer(a.reshape(2, 3, 2).copy(order='F')[:,:, ::-1], + ['c_index'], [['readonly']]) + assert_equal(iter_indices(i), + [1, 7, 3, 9, 5, 11, 0, 6, 2, 8, 4, 10]) + +def test_iter_best_order_f_index_1d(): + # The Fortran index should be correct with any reordering + + a = arange(4) + # 1D order + i = nditer(a, ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [0, 1, 2, 3]) + # 1D reversed order + i = nditer(a[::-1], ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [3, 2, 1, 0]) + +def test_iter_best_order_f_index_2d(): + # The Fortran index should be correct with any reordering + + a = arange(6) + # 2D C-order + i = nditer(a.reshape(2, 3), ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [0, 2, 4, 1, 3, 5]) + # 2D Fortran-order + i = nditer(a.reshape(2, 3).copy(order='F'), + ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [0, 1, 2, 3, 4, 5]) + # 2D reversed C-order + i = nditer(a.reshape(2, 3)[::-1], ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [1, 3, 5, 0, 2, 4]) + i = nditer(a.reshape(2, 3)[:, ::-1], ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [4, 2, 0, 5, 3, 1]) + i = nditer(a.reshape(2, 3)[::-1, ::-1], ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [5, 3, 1, 4, 2, 0]) + # 2D reversed Fortran-order + i = nditer(a.reshape(2, 3).copy(order='F')[::-1], + ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [1, 0, 3, 2, 5, 4]) + i = nditer(a.reshape(2, 3).copy(order='F')[:, ::-1], + ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [4, 5, 2, 3, 0, 1]) + i = nditer(a.reshape(2, 3).copy(order='F')[::-1, ::-1], + ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), [5, 4, 3, 2, 1, 0]) + +def test_iter_best_order_f_index_3d(): + # The Fortran index should be correct with any reordering + + a = arange(12) + # 3D C-order + i = nditer(a.reshape(2, 3, 2), ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), + [0, 6, 2, 8, 4, 10, 1, 7, 3, 9, 5, 11]) + # 3D Fortran-order + i = nditer(a.reshape(2, 3, 2).copy(order='F'), + ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), + [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11]) + # 3D reversed C-order + i = nditer(a.reshape(2, 3, 2)[::-1], ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), + [1, 7, 3, 9, 5, 11, 0, 6, 2, 8, 4, 10]) + i = nditer(a.reshape(2, 3, 2)[:, ::-1], ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), + [4, 10, 2, 8, 0, 6, 5, 11, 3, 9, 1, 7]) + i = nditer(a.reshape(2, 3, 2)[:,:, ::-1], ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), + [6, 0, 8, 2, 10, 4, 7, 1, 9, 3, 11, 5]) + # 3D reversed Fortran-order + i = nditer(a.reshape(2, 3, 2).copy(order='F')[::-1], + ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), + [1, 0, 3, 2, 5, 4, 7, 6, 9, 8, 11, 10]) + i = nditer(a.reshape(2, 3, 2).copy(order='F')[:, ::-1], + ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), + [4, 5, 2, 3, 0, 1, 10, 11, 8, 9, 6, 7]) + i = nditer(a.reshape(2, 3, 2).copy(order='F')[:,:, ::-1], + ['f_index'], [['readonly']]) + assert_equal(iter_indices(i), + [6, 7, 8, 9, 10, 11, 0, 1, 2, 3, 4, 5]) + +def test_iter_no_inner_full_coalesce(): + # Check no_inner iterators which coalesce into a single inner loop + + for shape in [(5,), (3, 4), (2, 3, 4), (2, 3, 4, 3), (2, 3, 2, 2, 3)]: + size = np.prod(shape) + a = arange(size) + # Test each combination of forward and backwards indexing + for dirs in range(2**len(shape)): + dirs_index = [slice(None)]*len(shape) + for bit in range(len(shape)): + if ((2**bit) & dirs): + dirs_index[bit] = slice(None, None, -1) + dirs_index = tuple(dirs_index) + + aview = a.reshape(shape)[dirs_index] + # C-order + i = nditer(aview, ['external_loop'], [['readonly']]) + assert_equal(i.ndim, 1) + assert_equal(i[0].shape, (size,)) + # Fortran-order + i = nditer(aview.T, ['external_loop'], [['readonly']]) + assert_equal(i.ndim, 1) + assert_equal(i[0].shape, (size,)) + # Other order + if len(shape) > 2: + i = nditer(aview.swapaxes(0, 1), + ['external_loop'], [['readonly']]) + assert_equal(i.ndim, 1) + assert_equal(i[0].shape, (size,)) + +def test_iter_no_inner_dim_coalescing(): + # Check no_inner iterators whose dimensions may not coalesce completely + + # Skipping the last element in a dimension prevents coalescing + # with the next-bigger dimension + a = arange(24).reshape(2, 3, 4)[:,:, :-1] + i = nditer(a, ['external_loop'], [['readonly']]) + assert_equal(i.ndim, 2) + assert_equal(i[0].shape, (3,)) + a = arange(24).reshape(2, 3, 4)[:, :-1,:] + i = nditer(a, ['external_loop'], [['readonly']]) + assert_equal(i.ndim, 2) + assert_equal(i[0].shape, (8,)) + a = arange(24).reshape(2, 3, 4)[:-1,:,:] + i = nditer(a, ['external_loop'], [['readonly']]) + assert_equal(i.ndim, 1) + assert_equal(i[0].shape, (12,)) + + # Even with lots of 1-sized dimensions, should still coalesce + a = arange(24).reshape(1, 1, 2, 1, 1, 3, 1, 1, 4, 1, 1) + i = nditer(a, ['external_loop'], [['readonly']]) + assert_equal(i.ndim, 1) + assert_equal(i[0].shape, (24,)) + +def test_iter_dim_coalescing(): + # Check that the correct number of dimensions are coalesced + + # Tracking a multi-index disables coalescing + a = arange(24).reshape(2, 3, 4) + i = nditer(a, ['multi_index'], [['readonly']]) + assert_equal(i.ndim, 3) + + # A tracked index can allow coalescing if it's compatible with the array + a3d = arange(24).reshape(2, 3, 4) + i = nditer(a3d, ['c_index'], [['readonly']]) + assert_equal(i.ndim, 1) + i = nditer(a3d.swapaxes(0, 1), ['c_index'], [['readonly']]) + assert_equal(i.ndim, 3) + i = nditer(a3d.T, ['c_index'], [['readonly']]) + assert_equal(i.ndim, 3) + i = nditer(a3d.T, ['f_index'], [['readonly']]) + assert_equal(i.ndim, 1) + i = nditer(a3d.T.swapaxes(0, 1), ['f_index'], [['readonly']]) + assert_equal(i.ndim, 3) + + # When C or F order is forced, coalescing may still occur + a3d = arange(24).reshape(2, 3, 4) + i = nditer(a3d, order='C') + assert_equal(i.ndim, 1) + i = nditer(a3d.T, order='C') + assert_equal(i.ndim, 3) + i = nditer(a3d, order='F') + assert_equal(i.ndim, 3) + i = nditer(a3d.T, order='F') + assert_equal(i.ndim, 1) + i = nditer(a3d, order='A') + assert_equal(i.ndim, 1) + i = nditer(a3d.T, order='A') + assert_equal(i.ndim, 1) + +def test_iter_broadcasting(): + # Standard NumPy broadcasting rules + + # 1D with scalar + i = nditer([arange(6), np.int32(2)], ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 6) + assert_equal(i.shape, (6,)) + + # 2D with scalar + i = nditer([arange(6).reshape(2, 3), np.int32(2)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 6) + assert_equal(i.shape, (2, 3)) + # 2D with 1D + i = nditer([arange(6).reshape(2, 3), arange(3)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 6) + assert_equal(i.shape, (2, 3)) + i = nditer([arange(2).reshape(2, 1), arange(3)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 6) + assert_equal(i.shape, (2, 3)) + # 2D with 2D + i = nditer([arange(2).reshape(2, 1), arange(3).reshape(1, 3)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 6) + assert_equal(i.shape, (2, 3)) + + # 3D with scalar + i = nditer([np.int32(2), arange(24).reshape(4, 2, 3)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 24) + assert_equal(i.shape, (4, 2, 3)) + # 3D with 1D + i = nditer([arange(3), arange(24).reshape(4, 2, 3)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 24) + assert_equal(i.shape, (4, 2, 3)) + i = nditer([arange(3), arange(8).reshape(4, 2, 1)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 24) + assert_equal(i.shape, (4, 2, 3)) + # 3D with 2D + i = nditer([arange(6).reshape(2, 3), arange(24).reshape(4, 2, 3)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 24) + assert_equal(i.shape, (4, 2, 3)) + i = nditer([arange(2).reshape(2, 1), arange(24).reshape(4, 2, 3)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 24) + assert_equal(i.shape, (4, 2, 3)) + i = nditer([arange(3).reshape(1, 3), arange(8).reshape(4, 2, 1)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 24) + assert_equal(i.shape, (4, 2, 3)) + # 3D with 3D + i = nditer([arange(2).reshape(1, 2, 1), arange(3).reshape(1, 1, 3), + arange(4).reshape(4, 1, 1)], + ['multi_index'], [['readonly']]*3) + assert_equal(i.itersize, 24) + assert_equal(i.shape, (4, 2, 3)) + i = nditer([arange(6).reshape(1, 2, 3), arange(4).reshape(4, 1, 1)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 24) + assert_equal(i.shape, (4, 2, 3)) + i = nditer([arange(24).reshape(4, 2, 3), arange(12).reshape(4, 1, 3)], + ['multi_index'], [['readonly']]*2) + assert_equal(i.itersize, 24) + assert_equal(i.shape, (4, 2, 3)) + +def test_iter_itershape(): + # Check that allocated outputs work with a specified shape + a = np.arange(6, dtype='i2').reshape(2, 3) + i = nditer([a, None], [], [['readonly'], ['writeonly', 'allocate']], + op_axes=[[0, 1, None], None], + itershape=(-1, -1, 4)) + assert_equal(i.operands[1].shape, (2, 3, 4)) + assert_equal(i.operands[1].strides, (24, 8, 2)) + + i = nditer([a.T, None], [], [['readonly'], ['writeonly', 'allocate']], + op_axes=[[0, 1, None], None], + itershape=(-1, -1, 4)) + assert_equal(i.operands[1].shape, (3, 2, 4)) + assert_equal(i.operands[1].strides, (8, 24, 2)) + + i = nditer([a.T, None], [], [['readonly'], ['writeonly', 'allocate']], + order='F', + op_axes=[[0, 1, None], None], + itershape=(-1, -1, 4)) + assert_equal(i.operands[1].shape, (3, 2, 4)) + assert_equal(i.operands[1].strides, (2, 6, 12)) + + # If we specify 1 in the itershape, it shouldn't allow broadcasting + # of that dimension to a bigger value + assert_raises(ValueError, nditer, [a, None], [], + [['readonly'], ['writeonly', 'allocate']], + op_axes=[[0, 1, None], None], + itershape=(-1, 1, 4)) + # Test bug that for no op_axes but itershape, they are NULLed correctly + i = np.nditer([np.ones(2), None, None], itershape=(2,)) + +def test_iter_broadcasting_errors(): + # Check that errors are thrown for bad broadcasting shapes + + # 1D with 1D + assert_raises(ValueError, nditer, [arange(2), arange(3)], + [], [['readonly']]*2) + # 2D with 1D + assert_raises(ValueError, nditer, + [arange(6).reshape(2, 3), arange(2)], + [], [['readonly']]*2) + # 2D with 2D + assert_raises(ValueError, nditer, + [arange(6).reshape(2, 3), arange(9).reshape(3, 3)], + [], [['readonly']]*2) + assert_raises(ValueError, nditer, + [arange(6).reshape(2, 3), arange(4).reshape(2, 2)], + [], [['readonly']]*2) + # 3D with 3D + assert_raises(ValueError, nditer, + [arange(36).reshape(3, 3, 4), arange(24).reshape(2, 3, 4)], + [], [['readonly']]*2) + assert_raises(ValueError, nditer, + [arange(8).reshape(2, 4, 1), arange(24).reshape(2, 3, 4)], + [], [['readonly']]*2) + + # Verify that the error message mentions the right shapes + try: + nditer([arange(2).reshape(1, 2, 1), + arange(3).reshape(1, 3), + arange(6).reshape(2, 3)], + [], + [['readonly'], ['readonly'], ['writeonly', 'no_broadcast']]) + raise AssertionError('Should have raised a broadcast error') + except ValueError as e: + msg = str(e) + # The message should contain the shape of the 3rd operand + assert_(msg.find('(2,3)') >= 0, + 'Message "%s" doesn\'t contain operand shape (2,3)' % msg) + # The message should contain the broadcast shape + assert_(msg.find('(1,2,3)') >= 0, + 'Message "%s" doesn\'t contain broadcast shape (1,2,3)' % msg) + + try: + nditer([arange(6).reshape(2, 3), arange(2)], + [], + [['readonly'], ['readonly']], + op_axes=[[0, 1], [0, np.newaxis]], + itershape=(4, 3)) + raise AssertionError('Should have raised a broadcast error') + except ValueError as e: + msg = str(e) + # The message should contain "shape->remappedshape" for each operand + assert_(msg.find('(2,3)->(2,3)') >= 0, + 'Message "%s" doesn\'t contain operand shape (2,3)->(2,3)' % msg) + assert_(msg.find('(2,)->(2,newaxis)') >= 0, + ('Message "%s" doesn\'t contain remapped operand shape' + + '(2,)->(2,newaxis)') % msg) + # The message should contain the itershape parameter + assert_(msg.find('(4,3)') >= 0, + 'Message "%s" doesn\'t contain itershape parameter (4,3)' % msg) + + try: + nditer([np.zeros((2, 1, 1)), np.zeros((2,))], + [], + [['writeonly', 'no_broadcast'], ['readonly']]) + raise AssertionError('Should have raised a broadcast error') + except ValueError as e: + msg = str(e) + # The message should contain the shape of the bad operand + assert_(msg.find('(2,1,1)') >= 0, + 'Message "%s" doesn\'t contain operand shape (2,1,1)' % msg) + # The message should contain the broadcast shape + assert_(msg.find('(2,1,2)') >= 0, + 'Message "%s" doesn\'t contain the broadcast shape (2,1,2)' % msg) + +def test_iter_flags_errors(): + # Check that bad combinations of flags produce errors + + a = arange(6) + + # Not enough operands + assert_raises(ValueError, nditer, [], [], []) + # Too many operands + assert_raises(ValueError, nditer, [a]*100, [], [['readonly']]*100) + # Bad global flag + assert_raises(ValueError, nditer, [a], ['bad flag'], [['readonly']]) + # Bad op flag + assert_raises(ValueError, nditer, [a], [], [['readonly', 'bad flag']]) + # Bad order parameter + assert_raises(ValueError, nditer, [a], [], [['readonly']], order='G') + # Bad casting parameter + assert_raises(ValueError, nditer, [a], [], [['readonly']], casting='noon') + # op_flags must match ops + assert_raises(ValueError, nditer, [a]*3, [], [['readonly']]*2) + # Cannot track both a C and an F index + assert_raises(ValueError, nditer, a, + ['c_index', 'f_index'], [['readonly']]) + # Inner iteration and multi-indices/indices are incompatible + assert_raises(ValueError, nditer, a, + ['external_loop', 'multi_index'], [['readonly']]) + assert_raises(ValueError, nditer, a, + ['external_loop', 'c_index'], [['readonly']]) + assert_raises(ValueError, nditer, a, + ['external_loop', 'f_index'], [['readonly']]) + # Must specify exactly one of readwrite/readonly/writeonly per operand + assert_raises(ValueError, nditer, a, [], [[]]) + assert_raises(ValueError, nditer, a, [], [['readonly', 'writeonly']]) + assert_raises(ValueError, nditer, a, [], [['readonly', 'readwrite']]) + assert_raises(ValueError, nditer, a, [], [['writeonly', 'readwrite']]) + assert_raises(ValueError, nditer, a, + [], [['readonly', 'writeonly', 'readwrite']]) + # Python scalars are always readonly + assert_raises(TypeError, nditer, 1.5, [], [['writeonly']]) + assert_raises(TypeError, nditer, 1.5, [], [['readwrite']]) + # Array scalars are always readonly + assert_raises(TypeError, nditer, np.int32(1), [], [['writeonly']]) + assert_raises(TypeError, nditer, np.int32(1), [], [['readwrite']]) + # Check readonly array + a.flags.writeable = False + assert_raises(ValueError, nditer, a, [], [['writeonly']]) + assert_raises(ValueError, nditer, a, [], [['readwrite']]) + a.flags.writeable = True + # Multi-indices available only with the multi_index flag + i = nditer(arange(6), [], [['readonly']]) + assert_raises(ValueError, lambda i:i.multi_index, i) + # Index available only with an index flag + assert_raises(ValueError, lambda i:i.index, i) + # GotoCoords and GotoIndex incompatible with buffering or no_inner + + def assign_multi_index(i): + i.multi_index = (0,) + + def assign_index(i): + i.index = 0 + + def assign_iterindex(i): + i.iterindex = 0 + + def assign_iterrange(i): + i.iterrange = (0, 1) + i = nditer(arange(6), ['external_loop']) + assert_raises(ValueError, assign_multi_index, i) + assert_raises(ValueError, assign_index, i) + assert_raises(ValueError, assign_iterindex, i) + assert_raises(ValueError, assign_iterrange, i) + i = nditer(arange(6), ['buffered']) + assert_raises(ValueError, assign_multi_index, i) + assert_raises(ValueError, assign_index, i) + assert_raises(ValueError, assign_iterrange, i) + # Can't iterate if size is zero + assert_raises(ValueError, nditer, np.array([])) + +def test_iter_slice(): + a, b, c = np.arange(3), np.arange(3), np.arange(3.) + i = nditer([a, b, c], [], ['readwrite']) + with i: + i[0:2] = (3, 3) + assert_equal(a, [3, 1, 2]) + assert_equal(b, [3, 1, 2]) + assert_equal(c, [0, 1, 2]) + i[1] = 12 + assert_equal(i[0:2], [3, 12]) + +def test_iter_assign_mapping(): + a = np.arange(24, dtype='f8').reshape(2, 3, 4).T + it = np.nditer(a, [], [['readwrite', 'updateifcopy']], + casting='same_kind', op_dtypes=[np.dtype('f4')]) + with it: + it.operands[0][...] = 3 + it.operands[0][...] = 14 + assert_equal(a, 14) + it = np.nditer(a, [], [['readwrite', 'updateifcopy']], + casting='same_kind', op_dtypes=[np.dtype('f4')]) + with it: + x = it.operands[0][-1:1] + x[...] = 14 + it.operands[0][...] = -1234 + assert_equal(a, -1234) + # check for no warnings on dealloc + x = None + it = None + +def test_iter_nbo_align_contig(): + # Check that byte order, alignment, and contig changes work + + # Byte order change by requesting a specific dtype + a = np.arange(6, dtype='f4') + au = a.byteswap() + au = au.view(au.dtype.newbyteorder()) + assert_(a.dtype.byteorder != au.dtype.byteorder) + i = nditer(au, [], [['readwrite', 'updateifcopy']], + casting='equiv', + op_dtypes=[np.dtype('f4')]) + with i: + # context manager triggers WRITEBACKIFCOPY on i at exit + assert_equal(i.dtypes[0].byteorder, a.dtype.byteorder) + assert_equal(i.operands[0].dtype.byteorder, a.dtype.byteorder) + assert_equal(i.operands[0], a) + i.operands[0][:] = 2 + assert_equal(au, [2]*6) + del i # should not raise a warning + # Byte order change by requesting NBO + a = np.arange(6, dtype='f4') + au = a.byteswap() + au = au.view(au.dtype.newbyteorder()) + assert_(a.dtype.byteorder != au.dtype.byteorder) + with nditer(au, [], [['readwrite', 'updateifcopy', 'nbo']], + casting='equiv') as i: + # context manager triggers UPDATEIFCOPY on i at exit + assert_equal(i.dtypes[0].byteorder, a.dtype.byteorder) + assert_equal(i.operands[0].dtype.byteorder, a.dtype.byteorder) + assert_equal(i.operands[0], a) + i.operands[0][:] = 12345 + i.operands[0][:] = 2 + assert_equal(au, [2]*6) + + # Unaligned input + a = np.zeros((6*4+1,), dtype='i1')[1:] + a.dtype = 'f4' + a[:] = np.arange(6, dtype='f4') + assert_(not a.flags.aligned) + # Without 'aligned', shouldn't copy + i = nditer(a, [], [['readonly']]) + assert_(not i.operands[0].flags.aligned) + assert_equal(i.operands[0], a) + # With 'aligned', should make a copy + with nditer(a, [], [['readwrite', 'updateifcopy', 'aligned']]) as i: + assert_(i.operands[0].flags.aligned) + # context manager triggers UPDATEIFCOPY on i at exit + assert_equal(i.operands[0], a) + i.operands[0][:] = 3 + assert_equal(a, [3]*6) + + # Discontiguous input + a = arange(12) + # If it is contiguous, shouldn't copy + i = nditer(a[:6], [], [['readonly']]) + assert_(i.operands[0].flags.contiguous) + assert_equal(i.operands[0], a[:6]) + # If it isn't contiguous, should buffer + i = nditer(a[::2], ['buffered', 'external_loop'], + [['readonly', 'contig']], + buffersize=10) + assert_(i[0].flags.contiguous) + assert_equal(i[0], a[::2]) + +def test_iter_array_cast(): + # Check that arrays are cast as requested + + # No cast 'f4' -> 'f4' + a = np.arange(6, dtype='f4').reshape(2, 3) + i = nditer(a, [], [['readwrite']], op_dtypes=[np.dtype('f4')]) + with i: + assert_equal(i.operands[0], a) + assert_equal(i.operands[0].dtype, np.dtype('f4')) + + # Byte-order cast ' '>f4' + a = np.arange(6, dtype='f4')]) as i: + assert_equal(i.operands[0], a) + assert_equal(i.operands[0].dtype, np.dtype('>f4')) + + # Safe case 'f4' -> 'f8' + a = np.arange(24, dtype='f4').reshape(2, 3, 4).swapaxes(1, 2) + i = nditer(a, [], [['readonly', 'copy']], + casting='safe', + op_dtypes=[np.dtype('f8')]) + assert_equal(i.operands[0], a) + assert_equal(i.operands[0].dtype, np.dtype('f8')) + # The memory layout of the temporary should match a (a is (48,4,16)) + # except negative strides get flipped to positive strides. + assert_equal(i.operands[0].strides, (96, 8, 32)) + a = a[::-1,:, ::-1] + i = nditer(a, [], [['readonly', 'copy']], + casting='safe', + op_dtypes=[np.dtype('f8')]) + assert_equal(i.operands[0], a) + assert_equal(i.operands[0].dtype, np.dtype('f8')) + assert_equal(i.operands[0].strides, (96, 8, 32)) + + # Same-kind cast 'f8' -> 'f4' -> 'f8' + a = np.arange(24, dtype='f8').reshape(2, 3, 4).T + with nditer(a, [], + [['readwrite', 'updateifcopy']], + casting='same_kind', + op_dtypes=[np.dtype('f4')]) as i: + assert_equal(i.operands[0], a) + assert_equal(i.operands[0].dtype, np.dtype('f4')) + assert_equal(i.operands[0].strides, (4, 16, 48)) + # Check that WRITEBACKIFCOPY is activated at exit + i.operands[0][2, 1, 1] = -12.5 + assert_(a[2, 1, 1] != -12.5) + assert_equal(a[2, 1, 1], -12.5) + + a = np.arange(6, dtype='i4')[::-2] + with nditer(a, [], + [['writeonly', 'updateifcopy']], + casting='unsafe', + op_dtypes=[np.dtype('f4')]) as i: + assert_equal(i.operands[0].dtype, np.dtype('f4')) + # Even though the stride was negative in 'a', it + # becomes positive in the temporary + assert_equal(i.operands[0].strides, (4,)) + i.operands[0][:] = [1, 2, 3] + assert_equal(a, [1, 2, 3]) + +def test_iter_array_cast_errors(): + # Check that invalid casts are caught + + # Need to enable copying for casts to occur + assert_raises(TypeError, nditer, arange(2, dtype='f4'), [], + [['readonly']], op_dtypes=[np.dtype('f8')]) + # Also need to allow casting for casts to occur + assert_raises(TypeError, nditer, arange(2, dtype='f4'), [], + [['readonly', 'copy']], casting='no', + op_dtypes=[np.dtype('f8')]) + assert_raises(TypeError, nditer, arange(2, dtype='f4'), [], + [['readonly', 'copy']], casting='equiv', + op_dtypes=[np.dtype('f8')]) + assert_raises(TypeError, nditer, arange(2, dtype='f8'), [], + [['writeonly', 'updateifcopy']], + casting='no', + op_dtypes=[np.dtype('f4')]) + assert_raises(TypeError, nditer, arange(2, dtype='f8'), [], + [['writeonly', 'updateifcopy']], + casting='equiv', + op_dtypes=[np.dtype('f4')]) + # ' '>f4' should not work with casting='no' + assert_raises(TypeError, nditer, arange(2, dtype='f4')]) + # 'f4' -> 'f8' is a safe cast, but 'f8' -> 'f4' isn't + assert_raises(TypeError, nditer, arange(2, dtype='f4'), [], + [['readwrite', 'updateifcopy']], + casting='safe', + op_dtypes=[np.dtype('f8')]) + assert_raises(TypeError, nditer, arange(2, dtype='f8'), [], + [['readwrite', 'updateifcopy']], + casting='safe', + op_dtypes=[np.dtype('f4')]) + # 'f4' -> 'i4' is neither a safe nor a same-kind cast + assert_raises(TypeError, nditer, arange(2, dtype='f4'), [], + [['readonly', 'copy']], + casting='same_kind', + op_dtypes=[np.dtype('i4')]) + assert_raises(TypeError, nditer, arange(2, dtype='i4'), [], + [['writeonly', 'updateifcopy']], + casting='same_kind', + op_dtypes=[np.dtype('f4')]) + +def test_iter_scalar_cast(): + # Check that scalars are cast as requested + + # No cast 'f4' -> 'f4' + i = nditer(np.float32(2.5), [], [['readonly']], + op_dtypes=[np.dtype('f4')]) + assert_equal(i.dtypes[0], np.dtype('f4')) + assert_equal(i.value.dtype, np.dtype('f4')) + assert_equal(i.value, 2.5) + # Safe cast 'f4' -> 'f8' + i = nditer(np.float32(2.5), [], + [['readonly', 'copy']], + casting='safe', + op_dtypes=[np.dtype('f8')]) + assert_equal(i.dtypes[0], np.dtype('f8')) + assert_equal(i.value.dtype, np.dtype('f8')) + assert_equal(i.value, 2.5) + # Same-kind cast 'f8' -> 'f4' + i = nditer(np.float64(2.5), [], + [['readonly', 'copy']], + casting='same_kind', + op_dtypes=[np.dtype('f4')]) + assert_equal(i.dtypes[0], np.dtype('f4')) + assert_equal(i.value.dtype, np.dtype('f4')) + assert_equal(i.value, 2.5) + # Unsafe cast 'f8' -> 'i4' + i = nditer(np.float64(3.0), [], + [['readonly', 'copy']], + casting='unsafe', + op_dtypes=[np.dtype('i4')]) + assert_equal(i.dtypes[0], np.dtype('i4')) + assert_equal(i.value.dtype, np.dtype('i4')) + assert_equal(i.value, 3) + # Readonly scalars may be cast even without setting COPY or BUFFERED + i = nditer(3, [], [['readonly']], op_dtypes=[np.dtype('f8')]) + assert_equal(i[0].dtype, np.dtype('f8')) + assert_equal(i[0], 3.) + +def test_iter_scalar_cast_errors(): + # Check that invalid casts are caught + + # Need to allow copying/buffering for write casts of scalars to occur + assert_raises(TypeError, nditer, np.float32(2), [], + [['readwrite']], op_dtypes=[np.dtype('f8')]) + assert_raises(TypeError, nditer, 2.5, [], + [['readwrite']], op_dtypes=[np.dtype('f4')]) + # 'f8' -> 'f4' isn't a safe cast if the value would overflow + assert_raises(TypeError, nditer, np.float64(1e60), [], + [['readonly']], + casting='safe', + op_dtypes=[np.dtype('f4')]) + # 'f4' -> 'i4' is neither a safe nor a same-kind cast + assert_raises(TypeError, nditer, np.float32(2), [], + [['readonly']], + casting='same_kind', + op_dtypes=[np.dtype('i4')]) + +def test_iter_object_arrays_basic(): + # Check that object arrays work + + obj = {'a':3,'b':'d'} + a = np.array([[1, 2, 3], None, obj, None], dtype='O') + if HAS_REFCOUNT: + rc = sys.getrefcount(obj) + + # Need to allow references for object arrays + assert_raises(TypeError, nditer, a) + if HAS_REFCOUNT: + assert_equal(sys.getrefcount(obj), rc) + + i = nditer(a, ['refs_ok'], ['readonly']) + vals = [x_[()] for x_ in i] + assert_equal(np.array(vals, dtype='O'), a) + vals, i, x = [None]*3 + if HAS_REFCOUNT: + assert_equal(sys.getrefcount(obj), rc) + + i = nditer(a.reshape(2, 2).T, ['refs_ok', 'buffered'], + ['readonly'], order='C') + assert_(i.iterationneedsapi) + vals = [x_[()] for x_ in i] + assert_equal(np.array(vals, dtype='O'), a.reshape(2, 2).ravel(order='F')) + vals, i, x = [None]*3 + if HAS_REFCOUNT: + assert_equal(sys.getrefcount(obj), rc) + + i = nditer(a.reshape(2, 2).T, ['refs_ok', 'buffered'], + ['readwrite'], order='C') + with i: + for x in i: + x[...] = None + vals, i, x = [None]*3 + if HAS_REFCOUNT: + assert_(sys.getrefcount(obj) == rc-1) + assert_equal(a, np.array([None]*4, dtype='O')) + +def test_iter_object_arrays_conversions(): + # Conversions to/from objects + a = np.arange(6, dtype='O') + i = nditer(a, ['refs_ok', 'buffered'], ['readwrite'], + casting='unsafe', op_dtypes='i4') + with i: + for x in i: + x[...] += 1 + assert_equal(a, np.arange(6)+1) + + a = np.arange(6, dtype='i4') + i = nditer(a, ['refs_ok', 'buffered'], ['readwrite'], + casting='unsafe', op_dtypes='O') + with i: + for x in i: + x[...] += 1 + assert_equal(a, np.arange(6)+1) + + # Non-contiguous object array + a = np.zeros((6,), dtype=[('p', 'i1'), ('a', 'O')]) + a = a['a'] + a[:] = np.arange(6) + i = nditer(a, ['refs_ok', 'buffered'], ['readwrite'], + casting='unsafe', op_dtypes='i4') + with i: + for x in i: + x[...] += 1 + assert_equal(a, np.arange(6)+1) + + #Non-contiguous value array + a = np.zeros((6,), dtype=[('p', 'i1'), ('a', 'i4')]) + a = a['a'] + a[:] = np.arange(6) + 98172488 + i = nditer(a, ['refs_ok', 'buffered'], ['readwrite'], + casting='unsafe', op_dtypes='O') + with i: + ob = i[0][()] + if HAS_REFCOUNT: + rc = sys.getrefcount(ob) + for x in i: + x[...] += 1 + if HAS_REFCOUNT: + assert_(sys.getrefcount(ob) == rc-1) + assert_equal(a, np.arange(6)+98172489) + +def test_iter_common_dtype(): + # Check that the iterator finds a common data type correctly + # (some checks are somewhat duplicate after adopting NEP 50) + + i = nditer([array([3], dtype='f4'), array([0], dtype='f8')], + ['common_dtype'], + [['readonly', 'copy']]*2, + casting='safe') + assert_equal(i.dtypes[0], np.dtype('f8')) + assert_equal(i.dtypes[1], np.dtype('f8')) + i = nditer([array([3], dtype='i4'), array([0], dtype='f4')], + ['common_dtype'], + [['readonly', 'copy']]*2, + casting='safe') + assert_equal(i.dtypes[0], np.dtype('f8')) + assert_equal(i.dtypes[1], np.dtype('f8')) + i = nditer([array([3], dtype='f4'), array(0, dtype='f8')], + ['common_dtype'], + [['readonly', 'copy']]*2, + casting='same_kind') + assert_equal(i.dtypes[0], np.dtype('f8')) + assert_equal(i.dtypes[1], np.dtype('f8')) + i = nditer([array([3], dtype='u4'), array(0, dtype='i4')], + ['common_dtype'], + [['readonly', 'copy']]*2, + casting='safe') + assert_equal(i.dtypes[0], np.dtype('i8')) + assert_equal(i.dtypes[1], np.dtype('i8')) + i = nditer([array([3], dtype='u4'), array(-12, dtype='i4')], + ['common_dtype'], + [['readonly', 'copy']]*2, + casting='safe') + assert_equal(i.dtypes[0], np.dtype('i8')) + assert_equal(i.dtypes[1], np.dtype('i8')) + i = nditer([array([3], dtype='u4'), array(-12, dtype='i4'), + array([2j], dtype='c8'), array([9], dtype='f8')], + ['common_dtype'], + [['readonly', 'copy']]*4, + casting='safe') + assert_equal(i.dtypes[0], np.dtype('c16')) + assert_equal(i.dtypes[1], np.dtype('c16')) + assert_equal(i.dtypes[2], np.dtype('c16')) + assert_equal(i.dtypes[3], np.dtype('c16')) + assert_equal(i.value, (3, -12, 2j, 9)) + + # When allocating outputs, other outputs aren't factored in + i = nditer([array([3], dtype='i4'), None, array([2j], dtype='c16')], [], + [['readonly', 'copy'], + ['writeonly', 'allocate'], + ['writeonly']], + casting='safe') + assert_equal(i.dtypes[0], np.dtype('i4')) + assert_equal(i.dtypes[1], np.dtype('i4')) + assert_equal(i.dtypes[2], np.dtype('c16')) + # But, if common data types are requested, they are + i = nditer([array([3], dtype='i4'), None, array([2j], dtype='c16')], + ['common_dtype'], + [['readonly', 'copy'], + ['writeonly', 'allocate'], + ['writeonly']], + casting='safe') + assert_equal(i.dtypes[0], np.dtype('c16')) + assert_equal(i.dtypes[1], np.dtype('c16')) + assert_equal(i.dtypes[2], np.dtype('c16')) + +def test_iter_copy_if_overlap(): + # Ensure the iterator makes copies on read/write overlap, if requested + + # Copy not needed, 1 op + for flag in ['readonly', 'writeonly', 'readwrite']: + a = arange(10) + i = nditer([a], ['copy_if_overlap'], [[flag]]) + with i: + assert_(i.operands[0] is a) + + # Copy needed, 2 ops, read-write overlap + x = arange(10) + a = x[1:] + b = x[:-1] + with nditer([a, b], ['copy_if_overlap'], [['readonly'], ['readwrite']]) as i: + assert_(not np.shares_memory(*i.operands)) + + # Copy not needed with elementwise, 2 ops, exactly same arrays + x = arange(10) + a = x + b = x + i = nditer([a, b], ['copy_if_overlap'], [['readonly', 'overlap_assume_elementwise'], + ['readwrite', 'overlap_assume_elementwise']]) + with i: + assert_(i.operands[0] is a and i.operands[1] is b) + with nditer([a, b], ['copy_if_overlap'], [['readonly'], ['readwrite']]) as i: + assert_(i.operands[0] is a and not np.shares_memory(i.operands[1], b)) + + # Copy not needed, 2 ops, no overlap + x = arange(10) + a = x[::2] + b = x[1::2] + i = nditer([a, b], ['copy_if_overlap'], [['readonly'], ['writeonly']]) + assert_(i.operands[0] is a and i.operands[1] is b) + + # Copy needed, 2 ops, read-write overlap + x = arange(4, dtype=np.int8) + a = x[3:] + b = x.view(np.int32)[:1] + with nditer([a, b], ['copy_if_overlap'], [['readonly'], ['writeonly']]) as i: + assert_(not np.shares_memory(*i.operands)) + + # Copy needed, 3 ops, read-write overlap + for flag in ['writeonly', 'readwrite']: + x = np.ones([10, 10]) + a = x + b = x.T + c = x + with nditer([a, b, c], ['copy_if_overlap'], + [['readonly'], ['readonly'], [flag]]) as i: + a2, b2, c2 = i.operands + assert_(not np.shares_memory(a2, c2)) + assert_(not np.shares_memory(b2, c2)) + + # Copy not needed, 3 ops, read-only overlap + x = np.ones([10, 10]) + a = x + b = x.T + c = x + i = nditer([a, b, c], ['copy_if_overlap'], + [['readonly'], ['readonly'], ['readonly']]) + a2, b2, c2 = i.operands + assert_(a is a2) + assert_(b is b2) + assert_(c is c2) + + # Copy not needed, 3 ops, read-only overlap + x = np.ones([10, 10]) + a = x + b = np.ones([10, 10]) + c = x.T + i = nditer([a, b, c], ['copy_if_overlap'], + [['readonly'], ['writeonly'], ['readonly']]) + a2, b2, c2 = i.operands + assert_(a is a2) + assert_(b is b2) + assert_(c is c2) + + # Copy not needed, 3 ops, write-only overlap + x = np.arange(7) + a = x[:3] + b = x[3:6] + c = x[4:7] + i = nditer([a, b, c], ['copy_if_overlap'], + [['readonly'], ['writeonly'], ['writeonly']]) + a2, b2, c2 = i.operands + assert_(a is a2) + assert_(b is b2) + assert_(c is c2) + +def test_iter_op_axes(): + # Check that custom axes work + + # Reverse the axes + a = arange(6).reshape(2, 3) + i = nditer([a, a.T], [], [['readonly']]*2, op_axes=[[0, 1], [1, 0]]) + assert_(all([x == y for (x, y) in i])) + a = arange(24).reshape(2, 3, 4) + i = nditer([a.T, a], [], [['readonly']]*2, op_axes=[[2, 1, 0], None]) + assert_(all([x == y for (x, y) in i])) + + # Broadcast 1D to any dimension + a = arange(1, 31).reshape(2, 3, 5) + b = arange(1, 3) + i = nditer([a, b], [], [['readonly']]*2, op_axes=[None, [0, -1, -1]]) + assert_equal([x*y for (x, y) in i], (a*b.reshape(2, 1, 1)).ravel()) + b = arange(1, 4) + i = nditer([a, b], [], [['readonly']]*2, op_axes=[None, [-1, 0, -1]]) + assert_equal([x*y for (x, y) in i], (a*b.reshape(1, 3, 1)).ravel()) + b = arange(1, 6) + i = nditer([a, b], [], [['readonly']]*2, + op_axes=[None, [np.newaxis, np.newaxis, 0]]) + assert_equal([x*y for (x, y) in i], (a*b.reshape(1, 1, 5)).ravel()) + + # Inner product-style broadcasting + a = arange(24).reshape(2, 3, 4) + b = arange(40).reshape(5, 2, 4) + i = nditer([a, b], ['multi_index'], [['readonly']]*2, + op_axes=[[0, 1, -1, -1], [-1, -1, 0, 1]]) + assert_equal(i.shape, (2, 3, 5, 2)) + + # Matrix product-style broadcasting + a = arange(12).reshape(3, 4) + b = arange(20).reshape(4, 5) + i = nditer([a, b], ['multi_index'], [['readonly']]*2, + op_axes=[[0, -1], [-1, 1]]) + assert_equal(i.shape, (3, 5)) + +def test_iter_op_axes_errors(): + # Check that custom axes throws errors for bad inputs + + # Wrong number of items in op_axes + a = arange(6).reshape(2, 3) + assert_raises(ValueError, nditer, [a, a], [], [['readonly']]*2, + op_axes=[[0], [1], [0]]) + # Out of bounds items in op_axes + assert_raises(ValueError, nditer, [a, a], [], [['readonly']]*2, + op_axes=[[2, 1], [0, 1]]) + assert_raises(ValueError, nditer, [a, a], [], [['readonly']]*2, + op_axes=[[0, 1], [2, -1]]) + # Duplicate items in op_axes + assert_raises(ValueError, nditer, [a, a], [], [['readonly']]*2, + op_axes=[[0, 0], [0, 1]]) + assert_raises(ValueError, nditer, [a, a], [], [['readonly']]*2, + op_axes=[[0, 1], [1, 1]]) + + # Different sized arrays in op_axes + assert_raises(ValueError, nditer, [a, a], [], [['readonly']]*2, + op_axes=[[0, 1], [0, 1, 0]]) + + # Non-broadcastable dimensions in the result + assert_raises(ValueError, nditer, [a, a], [], [['readonly']]*2, + op_axes=[[0, 1], [1, 0]]) + +def test_iter_copy(): + # Check that copying the iterator works correctly + a = arange(24).reshape(2, 3, 4) + + # Simple iterator + i = nditer(a) + j = i.copy() + assert_equal([x[()] for x in i], [x[()] for x in j]) + + i.iterindex = 3 + j = i.copy() + assert_equal([x[()] for x in i], [x[()] for x in j]) + + # Buffered iterator + i = nditer(a, ['buffered', 'ranged'], order='F', buffersize=3) + j = i.copy() + assert_equal([x[()] for x in i], [x[()] for x in j]) + + i.iterindex = 3 + j = i.copy() + assert_equal([x[()] for x in i], [x[()] for x in j]) + + i.iterrange = (3, 9) + j = i.copy() + assert_equal([x[()] for x in i], [x[()] for x in j]) + + i.iterrange = (2, 18) + next(i) + next(i) + j = i.copy() + assert_equal([x[()] for x in i], [x[()] for x in j]) + + # Casting iterator + with nditer(a, ['buffered'], order='F', casting='unsafe', + op_dtypes='f8', buffersize=5) as i: + j = i.copy() + assert_equal([x[()] for x in j], a.ravel(order='F')) + + a = arange(24, dtype=' unstructured (any to object), and many other + # casts, which cause this to require all steps in the casting machinery + # one level down as well as the iterator copy (which uses NpyAuxData clone) + in_dtype = np.dtype([("a", np.dtype("i,")), + ("b", np.dtype(">i,d,S17,>d,3f,O,i1"))]) + out_dtype = np.dtype([("a", np.dtype("O")), + ("b", np.dtype(">i,>i,S17,>d,>U3,3d,i1,O"))]) + arr = np.ones(1000, dtype=in_dtype) + + it = np.nditer((arr,), ["buffered", "external_loop", "refs_ok"], + op_dtypes=[out_dtype], casting="unsafe") + it_copy = it.copy() + + res1 = next(it) + del it + res2 = next(it_copy) + del it_copy + + expected = arr["a"].astype(out_dtype["a"]) + assert_array_equal(res1["a"], expected) + assert_array_equal(res2["a"], expected) + + for field in in_dtype["b"].names: + # Note that the .base avoids the subarray field + expected = arr["b"][field].astype(out_dtype["b"][field].base) + assert_array_equal(res1["b"][field], expected) + assert_array_equal(res2["b"][field], expected) + + +def test_iter_copy_casts_structured2(): + # Similar to the above, this is a fairly arcane test to cover internals + in_dtype = np.dtype([("a", np.dtype("O,O")), + ("b", np.dtype("5O,3O,(1,)O,(1,)i,(1,)O"))]) + out_dtype = np.dtype([("a", np.dtype("O")), + ("b", np.dtype("O,3i,4O,4O,4i"))]) + + arr = np.ones(1, dtype=in_dtype) + it = np.nditer((arr,), ["buffered", "external_loop", "refs_ok"], + op_dtypes=[out_dtype], casting="unsafe") + it_copy = it.copy() + + res1 = next(it) + del it + res2 = next(it_copy) + del it_copy + + # Array of two structured scalars: + for res in res1, res2: + # Cast to tuple by getitem, which may be weird and changeable?: + assert type(res["a"][0]) == tuple + assert res["a"][0] == (1, 1) + + for res in res1, res2: + assert_array_equal(res["b"]["f0"][0], np.ones(5, dtype=object)) + assert_array_equal(res["b"]["f1"], np.ones((1, 3), dtype="i")) + assert res["b"]["f2"].shape == (1, 4) + assert_array_equal(res["b"]["f2"][0], np.ones(4, dtype=object)) + assert_array_equal(res["b"]["f3"][0], np.ones(4, dtype=object)) + assert_array_equal(res["b"]["f3"][0], np.ones(4, dtype="i")) + + +def test_iter_allocate_output_simple(): + # Check that the iterator will properly allocate outputs + + # Simple case + a = arange(6) + i = nditer([a, None], [], [['readonly'], ['writeonly', 'allocate']], + op_dtypes=[None, np.dtype('f4')]) + assert_equal(i.operands[1].shape, a.shape) + assert_equal(i.operands[1].dtype, np.dtype('f4')) + +def test_iter_allocate_output_buffered_readwrite(): + # Allocated output with buffering + delay_bufalloc + + a = arange(6) + i = nditer([a, None], ['buffered', 'delay_bufalloc'], + [['readonly'], ['allocate', 'readwrite']]) + with i: + i.operands[1][:] = 1 + i.reset() + for x in i: + x[1][...] += x[0][...] + assert_equal(i.operands[1], a+1) + +def test_iter_allocate_output_itorder(): + # The allocated output should match the iteration order + + # C-order input, best iteration order + a = arange(6, dtype='i4').reshape(2, 3) + i = nditer([a, None], [], [['readonly'], ['writeonly', 'allocate']], + op_dtypes=[None, np.dtype('f4')]) + assert_equal(i.operands[1].shape, a.shape) + assert_equal(i.operands[1].strides, a.strides) + assert_equal(i.operands[1].dtype, np.dtype('f4')) + # F-order input, best iteration order + a = arange(24, dtype='i4').reshape(2, 3, 4).T + i = nditer([a, None], [], [['readonly'], ['writeonly', 'allocate']], + op_dtypes=[None, np.dtype('f4')]) + assert_equal(i.operands[1].shape, a.shape) + assert_equal(i.operands[1].strides, a.strides) + assert_equal(i.operands[1].dtype, np.dtype('f4')) + # Non-contiguous input, C iteration order + a = arange(24, dtype='i4').reshape(2, 3, 4).swapaxes(0, 1) + i = nditer([a, None], [], + [['readonly'], ['writeonly', 'allocate']], + order='C', + op_dtypes=[None, np.dtype('f4')]) + assert_equal(i.operands[1].shape, a.shape) + assert_equal(i.operands[1].strides, (32, 16, 4)) + assert_equal(i.operands[1].dtype, np.dtype('f4')) + +def test_iter_allocate_output_opaxes(): + # Specifying op_axes should work + + a = arange(24, dtype='i4').reshape(2, 3, 4) + i = nditer([None, a], [], [['writeonly', 'allocate'], ['readonly']], + op_dtypes=[np.dtype('u4'), None], + op_axes=[[1, 2, 0], None]) + assert_equal(i.operands[0].shape, (4, 2, 3)) + assert_equal(i.operands[0].strides, (4, 48, 16)) + assert_equal(i.operands[0].dtype, np.dtype('u4')) + +def test_iter_allocate_output_types_promotion(): + # Check type promotion of automatic outputs (this was more interesting + # before NEP 50...) + + i = nditer([array([3], dtype='f4'), array([0], dtype='f8'), None], [], + [['readonly']]*2+[['writeonly', 'allocate']]) + assert_equal(i.dtypes[2], np.dtype('f8')) + i = nditer([array([3], dtype='i4'), array([0], dtype='f4'), None], [], + [['readonly']]*2+[['writeonly', 'allocate']]) + assert_equal(i.dtypes[2], np.dtype('f8')) + i = nditer([array([3], dtype='f4'), array(0, dtype='f8'), None], [], + [['readonly']]*2+[['writeonly', 'allocate']]) + assert_equal(i.dtypes[2], np.dtype('f8')) + i = nditer([array([3], dtype='u4'), array(0, dtype='i4'), None], [], + [['readonly']]*2+[['writeonly', 'allocate']]) + assert_equal(i.dtypes[2], np.dtype('i8')) + i = nditer([array([3], dtype='u4'), array(-12, dtype='i4'), None], [], + [['readonly']]*2+[['writeonly', 'allocate']]) + assert_equal(i.dtypes[2], np.dtype('i8')) + +def test_iter_allocate_output_types_byte_order(): + # Verify the rules for byte order changes + + # When there's just one input, the output type exactly matches + a = array([3], dtype='u4') + a = a.view(a.dtype.newbyteorder()) + i = nditer([a, None], [], + [['readonly'], ['writeonly', 'allocate']]) + assert_equal(i.dtypes[0], i.dtypes[1]) + # With two or more inputs, the output type is in native byte order + i = nditer([a, a, None], [], + [['readonly'], ['readonly'], ['writeonly', 'allocate']]) + assert_(i.dtypes[0] != i.dtypes[2]) + assert_equal(i.dtypes[0].newbyteorder('='), i.dtypes[2]) + +def test_iter_allocate_output_types_scalar(): + # If the inputs are all scalars, the output should be a scalar + + i = nditer([None, 1, 2.3, np.float32(12), np.complex128(3)], [], + [['writeonly', 'allocate']] + [['readonly']]*4) + assert_equal(i.operands[0].dtype, np.dtype('complex128')) + assert_equal(i.operands[0].ndim, 0) + +def test_iter_allocate_output_subtype(): + # Make sure that the subtype with priority wins + class MyNDArray(np.ndarray): + __array_priority__ = 15 + + # subclass vs ndarray + a = np.array([[1, 2], [3, 4]]).view(MyNDArray) + b = np.arange(4).reshape(2, 2).T + i = nditer([a, b, None], [], + [['readonly'], ['readonly'], ['writeonly', 'allocate']]) + assert_equal(type(a), type(i.operands[2])) + assert_(type(b) is not type(i.operands[2])) + assert_equal(i.operands[2].shape, (2, 2)) + + # If subtypes are disabled, we should get back an ndarray. + i = nditer([a, b, None], [], + [['readonly'], ['readonly'], + ['writeonly', 'allocate', 'no_subtype']]) + assert_equal(type(b), type(i.operands[2])) + assert_(type(a) is not type(i.operands[2])) + assert_equal(i.operands[2].shape, (2, 2)) + +def test_iter_allocate_output_errors(): + # Check that the iterator will throw errors for bad output allocations + + # Need an input if no output data type is specified + a = arange(6) + assert_raises(TypeError, nditer, [a, None], [], + [['writeonly'], ['writeonly', 'allocate']]) + # Allocated output should be flagged for writing + assert_raises(ValueError, nditer, [a, None], [], + [['readonly'], ['allocate', 'readonly']]) + # Allocated output can't have buffering without delayed bufalloc + assert_raises(ValueError, nditer, [a, None], ['buffered'], + ['allocate', 'readwrite']) + # Must specify dtype if there are no inputs (cannot promote existing ones; + # maybe this should use the 'f4' here, but it does not historically.) + assert_raises(TypeError, nditer, [None, None], [], + [['writeonly', 'allocate'], + ['writeonly', 'allocate']], + op_dtypes=[None, np.dtype('f4')]) + # If using op_axes, must specify all the axes + a = arange(24, dtype='i4').reshape(2, 3, 4) + assert_raises(ValueError, nditer, [a, None], [], + [['readonly'], ['writeonly', 'allocate']], + op_dtypes=[None, np.dtype('f4')], + op_axes=[None, [0, np.newaxis, 1]]) + # If using op_axes, the axes must be within bounds + assert_raises(ValueError, nditer, [a, None], [], + [['readonly'], ['writeonly', 'allocate']], + op_dtypes=[None, np.dtype('f4')], + op_axes=[None, [0, 3, 1]]) + # If using op_axes, there can't be duplicates + assert_raises(ValueError, nditer, [a, None], [], + [['readonly'], ['writeonly', 'allocate']], + op_dtypes=[None, np.dtype('f4')], + op_axes=[None, [0, 2, 1, 0]]) + # Not all axes may be specified if a reduction. If there is a hole + # in op_axes, this is an error. + a = arange(24, dtype='i4').reshape(2, 3, 4) + assert_raises(ValueError, nditer, [a, None], ["reduce_ok"], + [['readonly'], ['readwrite', 'allocate']], + op_dtypes=[None, np.dtype('f4')], + op_axes=[None, [0, np.newaxis, 2]]) + +def test_all_allocated(): + # When no output and no shape is given, `()` is used as shape. + i = np.nditer([None], op_dtypes=["int64"]) + assert i.operands[0].shape == () + assert i.dtypes == (np.dtype("int64"),) + + i = np.nditer([None], op_dtypes=["int64"], itershape=(2, 3, 4)) + assert i.operands[0].shape == (2, 3, 4) + +def test_iter_remove_axis(): + a = arange(24).reshape(2, 3, 4) + + i = nditer(a, ['multi_index']) + i.remove_axis(1) + assert_equal([x for x in i], a[:, 0,:].ravel()) + + a = a[::-1,:,:] + i = nditer(a, ['multi_index']) + i.remove_axis(0) + assert_equal([x for x in i], a[0,:,:].ravel()) + +def test_iter_remove_multi_index_inner_loop(): + # Check that removing multi-index support works + + a = arange(24).reshape(2, 3, 4) + + i = nditer(a, ['multi_index']) + assert_equal(i.ndim, 3) + assert_equal(i.shape, (2, 3, 4)) + assert_equal(i.itviews[0].shape, (2, 3, 4)) + + # Removing the multi-index tracking causes all dimensions to coalesce + before = [x for x in i] + i.remove_multi_index() + after = [x for x in i] + + assert_equal(before, after) + assert_equal(i.ndim, 1) + assert_raises(ValueError, lambda i:i.shape, i) + assert_equal(i.itviews[0].shape, (24,)) + + # Removing the inner loop means there's just one iteration + i.reset() + assert_equal(i.itersize, 24) + assert_equal(i[0].shape, tuple()) + i.enable_external_loop() + assert_equal(i.itersize, 24) + assert_equal(i[0].shape, (24,)) + assert_equal(i.value, arange(24)) + +def test_iter_iterindex(): + # Make sure iterindex works + + buffersize = 5 + a = arange(24).reshape(4, 3, 2) + for flags in ([], ['buffered']): + i = nditer(a, flags, buffersize=buffersize) + assert_equal(iter_iterindices(i), list(range(24))) + i.iterindex = 2 + assert_equal(iter_iterindices(i), list(range(2, 24))) + + i = nditer(a, flags, order='F', buffersize=buffersize) + assert_equal(iter_iterindices(i), list(range(24))) + i.iterindex = 5 + assert_equal(iter_iterindices(i), list(range(5, 24))) + + i = nditer(a[::-1], flags, order='F', buffersize=buffersize) + assert_equal(iter_iterindices(i), list(range(24))) + i.iterindex = 9 + assert_equal(iter_iterindices(i), list(range(9, 24))) + + i = nditer(a[::-1, ::-1], flags, order='C', buffersize=buffersize) + assert_equal(iter_iterindices(i), list(range(24))) + i.iterindex = 13 + assert_equal(iter_iterindices(i), list(range(13, 24))) + + i = nditer(a[::1, ::-1], flags, buffersize=buffersize) + assert_equal(iter_iterindices(i), list(range(24))) + i.iterindex = 23 + assert_equal(iter_iterindices(i), list(range(23, 24))) + i.reset() + i.iterindex = 2 + assert_equal(iter_iterindices(i), list(range(2, 24))) + +def test_iter_iterrange(): + # Make sure getting and resetting the iterrange works + + buffersize = 5 + a = arange(24, dtype='i4').reshape(4, 3, 2) + a_fort = a.ravel(order='F') + + i = nditer(a, ['ranged'], ['readonly'], order='F', + buffersize=buffersize) + assert_equal(i.iterrange, (0, 24)) + assert_equal([x[()] for x in i], a_fort) + for r in [(0, 24), (1, 2), (3, 24), (5, 5), (0, 20), (23, 24)]: + i.iterrange = r + assert_equal(i.iterrange, r) + assert_equal([x[()] for x in i], a_fort[r[0]:r[1]]) + + i = nditer(a, ['ranged', 'buffered'], ['readonly'], order='F', + op_dtypes='f8', buffersize=buffersize) + assert_equal(i.iterrange, (0, 24)) + assert_equal([x[()] for x in i], a_fort) + for r in [(0, 24), (1, 2), (3, 24), (5, 5), (0, 20), (23, 24)]: + i.iterrange = r + assert_equal(i.iterrange, r) + assert_equal([x[()] for x in i], a_fort[r[0]:r[1]]) + + def get_array(i): + val = np.array([], dtype='f8') + for x in i: + val = np.concatenate((val, x)) + return val + + i = nditer(a, ['ranged', 'buffered', 'external_loop'], + ['readonly'], order='F', + op_dtypes='f8', buffersize=buffersize) + assert_equal(i.iterrange, (0, 24)) + assert_equal(get_array(i), a_fort) + for r in [(0, 24), (1, 2), (3, 24), (5, 5), (0, 20), (23, 24)]: + i.iterrange = r + assert_equal(i.iterrange, r) + assert_equal(get_array(i), a_fort[r[0]:r[1]]) + +def test_iter_buffering(): + # Test buffering with several buffer sizes and types + arrays = [] + # F-order swapped array + _tmp = np.arange(24, dtype='c16').reshape(2, 3, 4).T + _tmp = _tmp.view(_tmp.dtype.newbyteorder()).byteswap() + arrays.append(_tmp) + # Contiguous 1-dimensional array + arrays.append(np.arange(10, dtype='f4')) + # Unaligned array + a = np.zeros((4*16+1,), dtype='i1')[1:] + a.dtype = 'i4' + a[:] = np.arange(16, dtype='i4') + arrays.append(a) + # 4-D F-order array + arrays.append(np.arange(120, dtype='i4').reshape(5, 3, 2, 4).T) + for a in arrays: + for buffersize in (1, 2, 3, 5, 8, 11, 16, 1024): + vals = [] + i = nditer(a, ['buffered', 'external_loop'], + [['readonly', 'nbo', 'aligned']], + order='C', + casting='equiv', + buffersize=buffersize) + while not i.finished: + assert_(i[0].size <= buffersize) + vals.append(i[0].copy()) + i.iternext() + assert_equal(np.concatenate(vals), a.ravel(order='C')) + +def test_iter_write_buffering(): + # Test that buffering of writes is working + + # F-order swapped array + a = np.arange(24).reshape(2, 3, 4).T + a = a.view(a.dtype.newbyteorder()).byteswap() + i = nditer(a, ['buffered'], + [['readwrite', 'nbo', 'aligned']], + casting='equiv', + order='C', + buffersize=16) + x = 0 + with i: + while not i.finished: + i[0] = x + x += 1 + i.iternext() + assert_equal(a.ravel(order='C'), np.arange(24)) + +def test_iter_buffering_delayed_alloc(): + # Test that delaying buffer allocation works + + a = np.arange(6) + b = np.arange(1, dtype='f4') + i = nditer([a, b], ['buffered', 'delay_bufalloc', 'multi_index', 'reduce_ok'], + ['readwrite'], + casting='unsafe', + op_dtypes='f4') + assert_(i.has_delayed_bufalloc) + assert_raises(ValueError, lambda i:i.multi_index, i) + assert_raises(ValueError, lambda i:i[0], i) + assert_raises(ValueError, lambda i:i[0:2], i) + + def assign_iter(i): + i[0] = 0 + assert_raises(ValueError, assign_iter, i) + + i.reset() + assert_(not i.has_delayed_bufalloc) + assert_equal(i.multi_index, (0,)) + with i: + assert_equal(i[0], 0) + i[1] = 1 + assert_equal(i[0:2], [0, 1]) + assert_equal([[x[0][()], x[1][()]] for x in i], list(zip(range(6), [1]*6))) + +def test_iter_buffered_cast_simple(): + # Test that buffering can handle a simple cast + + a = np.arange(10, dtype='f4') + i = nditer(a, ['buffered', 'external_loop'], + [['readwrite', 'nbo', 'aligned']], + casting='same_kind', + op_dtypes=[np.dtype('f8')], + buffersize=3) + with i: + for v in i: + v[...] *= 2 + + assert_equal(a, 2*np.arange(10, dtype='f4')) + +def test_iter_buffered_cast_byteswapped(): + # Test that buffering can handle a cast which requires swap->cast->swap + + a = np.arange(10, dtype='f4') + a = a.view(a.dtype.newbyteorder()).byteswap() + i = nditer(a, ['buffered', 'external_loop'], + [['readwrite', 'nbo', 'aligned']], + casting='same_kind', + op_dtypes=[np.dtype('f8').newbyteorder()], + buffersize=3) + with i: + for v in i: + v[...] *= 2 + + assert_equal(a, 2*np.arange(10, dtype='f4')) + + with suppress_warnings() as sup: + sup.filter(np.exceptions.ComplexWarning) + + a = np.arange(10, dtype='f8') + a = a.view(a.dtype.newbyteorder()).byteswap() + i = nditer(a, ['buffered', 'external_loop'], + [['readwrite', 'nbo', 'aligned']], + casting='unsafe', + op_dtypes=[np.dtype('c8').newbyteorder()], + buffersize=3) + with i: + for v in i: + v[...] *= 2 + + assert_equal(a, 2*np.arange(10, dtype='f8')) + +def test_iter_buffered_cast_byteswapped_complex(): + # Test that buffering can handle a cast which requires swap->cast->copy + + a = np.arange(10, dtype='c8') + a = a.view(a.dtype.newbyteorder()).byteswap() + a += 2j + i = nditer(a, ['buffered', 'external_loop'], + [['readwrite', 'nbo', 'aligned']], + casting='same_kind', + op_dtypes=[np.dtype('c16')], + buffersize=3) + with i: + for v in i: + v[...] *= 2 + assert_equal(a, 2*np.arange(10, dtype='c8') + 4j) + + a = np.arange(10, dtype='c8') + a += 2j + i = nditer(a, ['buffered', 'external_loop'], + [['readwrite', 'nbo', 'aligned']], + casting='same_kind', + op_dtypes=[np.dtype('c16').newbyteorder()], + buffersize=3) + with i: + for v in i: + v[...] *= 2 + assert_equal(a, 2*np.arange(10, dtype='c8') + 4j) + + a = np.arange(10, dtype=np.clongdouble) + a = a.view(a.dtype.newbyteorder()).byteswap() + a += 2j + i = nditer(a, ['buffered', 'external_loop'], + [['readwrite', 'nbo', 'aligned']], + casting='same_kind', + op_dtypes=[np.dtype('c16')], + buffersize=3) + with i: + for v in i: + v[...] *= 2 + assert_equal(a, 2*np.arange(10, dtype=np.clongdouble) + 4j) + + a = np.arange(10, dtype=np.longdouble) + a = a.view(a.dtype.newbyteorder()).byteswap() + i = nditer(a, ['buffered', 'external_loop'], + [['readwrite', 'nbo', 'aligned']], + casting='same_kind', + op_dtypes=[np.dtype('f4')], + buffersize=7) + with i: + for v in i: + v[...] *= 2 + assert_equal(a, 2*np.arange(10, dtype=np.longdouble)) + +def test_iter_buffered_cast_structured_type(): + # Tests buffering of structured types + + # simple -> struct type (duplicates the value) + sdt = [('a', 'f4'), ('b', 'i8'), ('c', 'c8', (2, 3)), ('d', 'O')] + a = np.arange(3, dtype='f4') + 0.5 + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt) + vals = [np.array(x) for x in i] + assert_equal(vals[0]['a'], 0.5) + assert_equal(vals[0]['b'], 0) + assert_equal(vals[0]['c'], [[(0.5)]*3]*2) + assert_equal(vals[0]['d'], 0.5) + assert_equal(vals[1]['a'], 1.5) + assert_equal(vals[1]['b'], 1) + assert_equal(vals[1]['c'], [[(1.5)]*3]*2) + assert_equal(vals[1]['d'], 1.5) + assert_equal(vals[0].dtype, np.dtype(sdt)) + + # object -> struct type + sdt = [('a', 'f4'), ('b', 'i8'), ('c', 'c8', (2, 3)), ('d', 'O')] + a = np.zeros((3,), dtype='O') + a[0] = (0.5, 0.5, [[0.5, 0.5, 0.5], [0.5, 0.5, 0.5]], 0.5) + a[1] = (1.5, 1.5, [[1.5, 1.5, 1.5], [1.5, 1.5, 1.5]], 1.5) + a[2] = (2.5, 2.5, [[2.5, 2.5, 2.5], [2.5, 2.5, 2.5]], 2.5) + if HAS_REFCOUNT: + rc = sys.getrefcount(a[0]) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt) + vals = [x.copy() for x in i] + assert_equal(vals[0]['a'], 0.5) + assert_equal(vals[0]['b'], 0) + assert_equal(vals[0]['c'], [[(0.5)]*3]*2) + assert_equal(vals[0]['d'], 0.5) + assert_equal(vals[1]['a'], 1.5) + assert_equal(vals[1]['b'], 1) + assert_equal(vals[1]['c'], [[(1.5)]*3]*2) + assert_equal(vals[1]['d'], 1.5) + assert_equal(vals[0].dtype, np.dtype(sdt)) + vals, i, x = [None]*3 + if HAS_REFCOUNT: + assert_equal(sys.getrefcount(a[0]), rc) + + # single-field struct type -> simple + sdt = [('a', 'f4')] + a = np.array([(5.5,), (8,)], dtype=sdt) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes='i4') + assert_equal([x_[()] for x_ in i], [5, 8]) + + # make sure multi-field struct type -> simple doesn't work + sdt = [('a', 'f4'), ('b', 'i8'), ('d', 'O')] + a = np.array([(5.5, 7, 'test'), (8, 10, 11)], dtype=sdt) + assert_raises(TypeError, lambda: ( + nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes='i4'))) + + # struct type -> struct type (field-wise copy) + sdt1 = [('a', 'f4'), ('b', 'i8'), ('d', 'O')] + sdt2 = [('d', 'u2'), ('a', 'O'), ('b', 'f8')] + a = np.array([(1, 2, 3), (4, 5, 6)], dtype=sdt1) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + assert_equal([np.array(x_) for x_ in i], + [np.array((1, 2, 3), dtype=sdt2), + np.array((4, 5, 6), dtype=sdt2)]) + + +def test_iter_buffered_cast_structured_type_failure_with_cleanup(): + # make sure struct type -> struct type with different + # number of fields fails + sdt1 = [('a', 'f4'), ('b', 'i8'), ('d', 'O')] + sdt2 = [('b', 'O'), ('a', 'f8')] + a = np.array([(1, 2, 3), (4, 5, 6)], dtype=sdt1) + + for intent in ["readwrite", "readonly", "writeonly"]: + # This test was initially designed to test an error at a different + # place, but will now raise earlier to to the cast not being possible: + # `assert np.can_cast(a.dtype, sdt2, casting="unsafe")` fails. + # Without a faulty DType, there is probably no reliable + # way to get the initial tested behaviour. + simple_arr = np.array([1, 2], dtype="i,i") # requires clean up + with pytest.raises(TypeError): + nditer((simple_arr, a), ['buffered', 'refs_ok'], [intent, intent], + casting='unsafe', op_dtypes=["f,f", sdt2]) + + +def test_buffered_cast_error_paths(): + with pytest.raises(ValueError): + # The input is cast into an `S3` buffer + np.nditer((np.array("a", dtype="S1"),), op_dtypes=["i"], + casting="unsafe", flags=["buffered"]) + + # The `M8[ns]` is cast into the `S3` output + it = np.nditer((np.array(1, dtype="i"),), op_dtypes=["S1"], + op_flags=["writeonly"], casting="unsafe", flags=["buffered"]) + with pytest.raises(ValueError): + with it: + buf = next(it) + buf[...] = "a" # cannot be converted to int. + +@pytest.mark.skipif(IS_WASM, reason="Cannot start subprocess") +@pytest.mark.skipif(not HAS_REFCOUNT, reason="PyPy seems to not hit this.") +def test_buffered_cast_error_paths_unraisable(): + # The following gives an unraisable error. Pytest sometimes captures that + # (depending python and/or pytest version). So with Python>=3.8 this can + # probably be cleaned out in the future to check for + # pytest.PytestUnraisableExceptionWarning: + code = textwrap.dedent(""" + import numpy as np + + it = np.nditer((np.array(1, dtype="i"),), op_dtypes=["S1"], + op_flags=["writeonly"], casting="unsafe", flags=["buffered"]) + buf = next(it) + buf[...] = "a" + del buf, it # Flushing only happens during deallocate right now. + """) + res = subprocess.check_output([sys.executable, "-c", code], + stderr=subprocess.STDOUT, text=True) + assert "ValueError" in res + + +def test_iter_buffered_cast_subarray(): + # Tests buffering of subarrays + + # one element -> many (copies it to all) + sdt1 = [('a', 'f4')] + sdt2 = [('a', 'f8', (3, 2, 2))] + a = np.zeros((6,), dtype=sdt1) + a['a'] = np.arange(6) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + for x, count in zip(i, list(range(6))): + assert_(np.all(x['a'] == count)) + + # one element -> many -> back (copies it to all) + sdt1 = [('a', 'O', (1, 1))] + sdt2 = [('a', 'O', (3, 2, 2))] + a = np.zeros((6,), dtype=sdt1) + a['a'][:, 0, 0] = np.arange(6) + i = nditer(a, ['buffered', 'refs_ok'], ['readwrite'], + casting='unsafe', + op_dtypes=sdt2) + with i: + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_(np.all(x['a'] == count)) + x['a'][0] += 2 + count += 1 + assert_equal(a['a'], np.arange(6).reshape(6, 1, 1)+2) + + # many -> one element -> back (copies just element 0) + sdt1 = [('a', 'O', (3, 2, 2))] + sdt2 = [('a', 'O', (1,))] + a = np.zeros((6,), dtype=sdt1) + a['a'][:, 0, 0, 0] = np.arange(6) + i = nditer(a, ['buffered', 'refs_ok'], ['readwrite'], + casting='unsafe', + op_dtypes=sdt2) + with i: + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_equal(x['a'], count) + x['a'] += 2 + count += 1 + assert_equal(a['a'], np.arange(6).reshape(6, 1, 1, 1)*np.ones((1, 3, 2, 2))+2) + + # many -> one element -> back (copies just element 0) + sdt1 = [('a', 'f8', (3, 2, 2))] + sdt2 = [('a', 'O', (1,))] + a = np.zeros((6,), dtype=sdt1) + a['a'][:, 0, 0, 0] = np.arange(6) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_equal(x['a'], count) + count += 1 + + # many -> one element (copies just element 0) + sdt1 = [('a', 'O', (3, 2, 2))] + sdt2 = [('a', 'f4', (1,))] + a = np.zeros((6,), dtype=sdt1) + a['a'][:, 0, 0, 0] = np.arange(6) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_equal(x['a'], count) + count += 1 + + # many -> matching shape (straightforward copy) + sdt1 = [('a', 'O', (3, 2, 2))] + sdt2 = [('a', 'f4', (3, 2, 2))] + a = np.zeros((6,), dtype=sdt1) + a['a'] = np.arange(6*3*2*2).reshape(6, 3, 2, 2) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_equal(x['a'], a[count]['a']) + count += 1 + + # vector -> smaller vector (truncates) + sdt1 = [('a', 'f8', (6,))] + sdt2 = [('a', 'f4', (2,))] + a = np.zeros((6,), dtype=sdt1) + a['a'] = np.arange(6*6).reshape(6, 6) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_equal(x['a'], a[count]['a'][:2]) + count += 1 + + # vector -> bigger vector (pads with zeros) + sdt1 = [('a', 'f8', (2,))] + sdt2 = [('a', 'f4', (6,))] + a = np.zeros((6,), dtype=sdt1) + a['a'] = np.arange(6*2).reshape(6, 2) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_equal(x['a'][:2], a[count]['a']) + assert_equal(x['a'][2:], [0, 0, 0, 0]) + count += 1 + + # vector -> matrix (broadcasts) + sdt1 = [('a', 'f8', (2,))] + sdt2 = [('a', 'f4', (2, 2))] + a = np.zeros((6,), dtype=sdt1) + a['a'] = np.arange(6*2).reshape(6, 2) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_equal(x['a'][0], a[count]['a']) + assert_equal(x['a'][1], a[count]['a']) + count += 1 + + # vector -> matrix (broadcasts and zero-pads) + sdt1 = [('a', 'f8', (2, 1))] + sdt2 = [('a', 'f4', (3, 2))] + a = np.zeros((6,), dtype=sdt1) + a['a'] = np.arange(6*2).reshape(6, 2, 1) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_equal(x['a'][:2, 0], a[count]['a'][:, 0]) + assert_equal(x['a'][:2, 1], a[count]['a'][:, 0]) + assert_equal(x['a'][2,:], [0, 0]) + count += 1 + + # matrix -> matrix (truncates and zero-pads) + sdt1 = [('a', 'f8', (2, 3))] + sdt2 = [('a', 'f4', (3, 2))] + a = np.zeros((6,), dtype=sdt1) + a['a'] = np.arange(6*2*3).reshape(6, 2, 3) + i = nditer(a, ['buffered', 'refs_ok'], ['readonly'], + casting='unsafe', + op_dtypes=sdt2) + assert_equal(i[0].dtype, np.dtype(sdt2)) + count = 0 + for x in i: + assert_equal(x['a'][:2, 0], a[count]['a'][:, 0]) + assert_equal(x['a'][:2, 1], a[count]['a'][:, 1]) + assert_equal(x['a'][2,:], [0, 0]) + count += 1 + +def test_iter_buffering_badwriteback(): + # Writing back from a buffer cannot combine elements + + # a needs write buffering, but had a broadcast dimension + a = np.arange(6).reshape(2, 3, 1) + b = np.arange(12).reshape(2, 3, 2) + assert_raises(ValueError, nditer, [a, b], + ['buffered', 'external_loop'], + [['readwrite'], ['writeonly']], + order='C') + + # But if a is readonly, it's fine + nditer([a, b], ['buffered', 'external_loop'], + [['readonly'], ['writeonly']], + order='C') + + # If a has just one element, it's fine too (constant 0 stride, a reduction) + a = np.arange(1).reshape(1, 1, 1) + nditer([a, b], ['buffered', 'external_loop', 'reduce_ok'], + [['readwrite'], ['writeonly']], + order='C') + + # check that it fails on other dimensions too + a = np.arange(6).reshape(1, 3, 2) + assert_raises(ValueError, nditer, [a, b], + ['buffered', 'external_loop'], + [['readwrite'], ['writeonly']], + order='C') + a = np.arange(4).reshape(2, 1, 2) + assert_raises(ValueError, nditer, [a, b], + ['buffered', 'external_loop'], + [['readwrite'], ['writeonly']], + order='C') + +def test_iter_buffering_string(): + # Safe casting disallows shrinking strings + a = np.array(['abc', 'a', 'abcd'], dtype=np.bytes_) + assert_equal(a.dtype, np.dtype('S4')) + assert_raises(TypeError, nditer, a, ['buffered'], ['readonly'], + op_dtypes='S2') + i = nditer(a, ['buffered'], ['readonly'], op_dtypes='S6') + assert_equal(i[0], b'abc') + assert_equal(i[0].dtype, np.dtype('S6')) + + a = np.array(['abc', 'a', 'abcd'], dtype=np.str_) + assert_equal(a.dtype, np.dtype('U4')) + assert_raises(TypeError, nditer, a, ['buffered'], ['readonly'], + op_dtypes='U2') + i = nditer(a, ['buffered'], ['readonly'], op_dtypes='U6') + assert_equal(i[0], 'abc') + assert_equal(i[0].dtype, np.dtype('U6')) + +def test_iter_buffering_growinner(): + # Test that the inner loop grows when no buffering is needed + a = np.arange(30) + i = nditer(a, ['buffered', 'growinner', 'external_loop'], + buffersize=5) + # Should end up with just one inner loop here + assert_equal(i[0].size, a.size) + + +@pytest.mark.slow +def test_iter_buffered_reduce_reuse(): + # large enough array for all views, including negative strides. + a = np.arange(2*3**5)[3**5:3**5+1] + flags = ['buffered', 'delay_bufalloc', 'multi_index', 'reduce_ok', 'refs_ok'] + op_flags = [('readonly',), ('readwrite', 'allocate')] + op_axes_list = [[(0, 1, 2), (0, 1, -1)], [(0, 1, 2), (0, -1, -1)]] + # wrong dtype to force buffering + op_dtypes = [float, a.dtype] + + def get_params(): + for xs in range(-3**2, 3**2 + 1): + for ys in range(xs, 3**2 + 1): + for op_axes in op_axes_list: + # last stride is reduced and because of that not + # important for this test, as it is the inner stride. + strides = (xs * a.itemsize, ys * a.itemsize, a.itemsize) + arr = np.lib.stride_tricks.as_strided(a, (3, 3, 3), strides) + + for skip in [0, 1]: + yield arr, op_axes, skip + + for arr, op_axes, skip in get_params(): + nditer2 = np.nditer([arr.copy(), None], + op_axes=op_axes, flags=flags, op_flags=op_flags, + op_dtypes=op_dtypes) + with nditer2: + nditer2.operands[-1][...] = 0 + nditer2.reset() + nditer2.iterindex = skip + + for (a2_in, b2_in) in nditer2: + b2_in += a2_in.astype(np.int_) + + comp_res = nditer2.operands[-1] + + for bufsize in range(0, 3**3): + nditer1 = np.nditer([arr, None], + op_axes=op_axes, flags=flags, op_flags=op_flags, + buffersize=bufsize, op_dtypes=op_dtypes) + with nditer1: + nditer1.operands[-1][...] = 0 + nditer1.reset() + nditer1.iterindex = skip + + for (a1_in, b1_in) in nditer1: + b1_in += a1_in.astype(np.int_) + + res = nditer1.operands[-1] + assert_array_equal(res, comp_res) + + +def test_iter_no_broadcast(): + # Test that the no_broadcast flag works + a = np.arange(24).reshape(2, 3, 4) + b = np.arange(6).reshape(2, 3, 1) + c = np.arange(12).reshape(3, 4) + + nditer([a, b, c], [], + [['readonly', 'no_broadcast'], + ['readonly'], ['readonly']]) + assert_raises(ValueError, nditer, [a, b, c], [], + [['readonly'], ['readonly', 'no_broadcast'], ['readonly']]) + assert_raises(ValueError, nditer, [a, b, c], [], + [['readonly'], ['readonly'], ['readonly', 'no_broadcast']]) + + +class TestIterNested: + + def test_basic(self): + # Test nested iteration basic usage + a = arange(12).reshape(2, 3, 2) + + i, j = np.nested_iters(a, [[0], [1, 2]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 1, 2, 3, 4, 5], [6, 7, 8, 9, 10, 11]]) + + i, j = np.nested_iters(a, [[0, 1], [2]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 1], [2, 3], [4, 5], [6, 7], [8, 9], [10, 11]]) + + i, j = np.nested_iters(a, [[0, 2], [1]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 2, 4], [1, 3, 5], [6, 8, 10], [7, 9, 11]]) + + def test_reorder(self): + # Test nested iteration basic usage + a = arange(12).reshape(2, 3, 2) + + # In 'K' order (default), it gets reordered + i, j = np.nested_iters(a, [[0], [2, 1]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 1, 2, 3, 4, 5], [6, 7, 8, 9, 10, 11]]) + + i, j = np.nested_iters(a, [[1, 0], [2]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 1], [2, 3], [4, 5], [6, 7], [8, 9], [10, 11]]) + + i, j = np.nested_iters(a, [[2, 0], [1]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 2, 4], [1, 3, 5], [6, 8, 10], [7, 9, 11]]) + + # In 'C' order, it doesn't + i, j = np.nested_iters(a, [[0], [2, 1]], order='C') + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 2, 4, 1, 3, 5], [6, 8, 10, 7, 9, 11]]) + + i, j = np.nested_iters(a, [[1, 0], [2]], order='C') + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 1], [6, 7], [2, 3], [8, 9], [4, 5], [10, 11]]) + + i, j = np.nested_iters(a, [[2, 0], [1]], order='C') + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 2, 4], [6, 8, 10], [1, 3, 5], [7, 9, 11]]) + + def test_flip_axes(self): + # Test nested iteration with negative axes + a = arange(12).reshape(2, 3, 2)[::-1, ::-1, ::-1] + + # In 'K' order (default), the axes all get flipped + i, j = np.nested_iters(a, [[0], [1, 2]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 1, 2, 3, 4, 5], [6, 7, 8, 9, 10, 11]]) + + i, j = np.nested_iters(a, [[0, 1], [2]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 1], [2, 3], [4, 5], [6, 7], [8, 9], [10, 11]]) + + i, j = np.nested_iters(a, [[0, 2], [1]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 2, 4], [1, 3, 5], [6, 8, 10], [7, 9, 11]]) + + # In 'C' order, flipping axes is disabled + i, j = np.nested_iters(a, [[0], [1, 2]], order='C') + vals = [list(j) for _ in i] + assert_equal(vals, [[11, 10, 9, 8, 7, 6], [5, 4, 3, 2, 1, 0]]) + + i, j = np.nested_iters(a, [[0, 1], [2]], order='C') + vals = [list(j) for _ in i] + assert_equal(vals, [[11, 10], [9, 8], [7, 6], [5, 4], [3, 2], [1, 0]]) + + i, j = np.nested_iters(a, [[0, 2], [1]], order='C') + vals = [list(j) for _ in i] + assert_equal(vals, [[11, 9, 7], [10, 8, 6], [5, 3, 1], [4, 2, 0]]) + + def test_broadcast(self): + # Test nested iteration with broadcasting + a = arange(2).reshape(2, 1) + b = arange(3).reshape(1, 3) + + i, j = np.nested_iters([a, b], [[0], [1]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[[0, 0], [0, 1], [0, 2]], [[1, 0], [1, 1], [1, 2]]]) + + i, j = np.nested_iters([a, b], [[1], [0]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[[0, 0], [1, 0]], [[0, 1], [1, 1]], [[0, 2], [1, 2]]]) + + def test_dtype_copy(self): + # Test nested iteration with a copy to change dtype + + # copy + a = arange(6, dtype='i4').reshape(2, 3) + i, j = np.nested_iters(a, [[0], [1]], + op_flags=['readonly', 'copy'], + op_dtypes='f8') + assert_equal(j[0].dtype, np.dtype('f8')) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 1, 2], [3, 4, 5]]) + vals = None + + # writebackifcopy - using context manager + a = arange(6, dtype='f4').reshape(2, 3) + i, j = np.nested_iters(a, [[0], [1]], + op_flags=['readwrite', 'updateifcopy'], + casting='same_kind', + op_dtypes='f8') + with i, j: + assert_equal(j[0].dtype, np.dtype('f8')) + for x in i: + for y in j: + y[...] += 1 + assert_equal(a, [[0, 1, 2], [3, 4, 5]]) + assert_equal(a, [[1, 2, 3], [4, 5, 6]]) + + # writebackifcopy - using close() + a = arange(6, dtype='f4').reshape(2, 3) + i, j = np.nested_iters(a, [[0], [1]], + op_flags=['readwrite', 'updateifcopy'], + casting='same_kind', + op_dtypes='f8') + assert_equal(j[0].dtype, np.dtype('f8')) + for x in i: + for y in j: + y[...] += 1 + assert_equal(a, [[0, 1, 2], [3, 4, 5]]) + i.close() + j.close() + assert_equal(a, [[1, 2, 3], [4, 5, 6]]) + + def test_dtype_buffered(self): + # Test nested iteration with buffering to change dtype + + a = arange(6, dtype='f4').reshape(2, 3) + i, j = np.nested_iters(a, [[0], [1]], + flags=['buffered'], + op_flags=['readwrite'], + casting='same_kind', + op_dtypes='f8') + assert_equal(j[0].dtype, np.dtype('f8')) + for x in i: + for y in j: + y[...] += 1 + assert_equal(a, [[1, 2, 3], [4, 5, 6]]) + + def test_0d(self): + a = np.arange(12).reshape(2, 3, 2) + i, j = np.nested_iters(a, [[], [1, 0, 2]]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11]]) + + i, j = np.nested_iters(a, [[1, 0, 2], []]) + vals = [list(j) for _ in i] + assert_equal(vals, [[0], [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11]]) + + i, j, k = np.nested_iters(a, [[2, 0], [], [1]]) + vals = [] + for x in i: + for y in j: + vals.append([z for z in k]) + assert_equal(vals, [[0, 2, 4], [1, 3, 5], [6, 8, 10], [7, 9, 11]]) + + def test_iter_nested_iters_dtype_buffered(self): + # Test nested iteration with buffering to change dtype + + a = arange(6, dtype='f4').reshape(2, 3) + i, j = np.nested_iters(a, [[0], [1]], + flags=['buffered'], + op_flags=['readwrite'], + casting='same_kind', + op_dtypes='f8') + with i, j: + assert_equal(j[0].dtype, np.dtype('f8')) + for x in i: + for y in j: + y[...] += 1 + assert_equal(a, [[1, 2, 3], [4, 5, 6]]) + +def test_iter_reduction_error(): + + a = np.arange(6) + assert_raises(ValueError, nditer, [a, None], [], + [['readonly'], ['readwrite', 'allocate']], + op_axes=[[0], [-1]]) + + a = np.arange(6).reshape(2, 3) + assert_raises(ValueError, nditer, [a, None], ['external_loop'], + [['readonly'], ['readwrite', 'allocate']], + op_axes=[[0, 1], [-1, -1]]) + +def test_iter_reduction(): + # Test doing reductions with the iterator + + a = np.arange(6) + i = nditer([a, None], ['reduce_ok'], + [['readonly'], ['readwrite', 'allocate']], + op_axes=[[0], [-1]]) + # Need to initialize the output operand to the addition unit + with i: + i.operands[1][...] = 0 + # Do the reduction + for x, y in i: + y[...] += x + # Since no axes were specified, should have allocated a scalar + assert_equal(i.operands[1].ndim, 0) + assert_equal(i.operands[1], np.sum(a)) + + a = np.arange(6).reshape(2, 3) + i = nditer([a, None], ['reduce_ok', 'external_loop'], + [['readonly'], ['readwrite', 'allocate']], + op_axes=[[0, 1], [-1, -1]]) + # Need to initialize the output operand to the addition unit + with i: + i.operands[1][...] = 0 + # Reduction shape/strides for the output + assert_equal(i[1].shape, (6,)) + assert_equal(i[1].strides, (0,)) + # Do the reduction + for x, y in i: + # Use a for loop instead of ``y[...] += x`` + # (equivalent to ``y[...] = y[...].copy() + x``), + # because y has zero strides we use for the reduction + for j in range(len(y)): + y[j] += x[j] + # Since no axes were specified, should have allocated a scalar + assert_equal(i.operands[1].ndim, 0) + assert_equal(i.operands[1], np.sum(a)) + + # This is a tricky reduction case for the buffering double loop + # to handle + a = np.ones((2, 3, 5)) + it1 = nditer([a, None], ['reduce_ok', 'external_loop'], + [['readonly'], ['readwrite', 'allocate']], + op_axes=[None, [0, -1, 1]]) + it2 = nditer([a, None], ['reduce_ok', 'external_loop', + 'buffered', 'delay_bufalloc'], + [['readonly'], ['readwrite', 'allocate']], + op_axes=[None, [0, -1, 1]], buffersize=10) + with it1, it2: + it1.operands[1].fill(0) + it2.operands[1].fill(0) + it2.reset() + for x in it1: + x[1][...] += x[0] + for x in it2: + x[1][...] += x[0] + assert_equal(it1.operands[1], it2.operands[1]) + assert_equal(it2.operands[1].sum(), a.size) + +def test_iter_buffering_reduction(): + # Test doing buffered reductions with the iterator + + a = np.arange(6) + b = np.array(0., dtype='f8').byteswap() + b = b.view(b.dtype.newbyteorder()) + i = nditer([a, b], ['reduce_ok', 'buffered'], + [['readonly'], ['readwrite', 'nbo']], + op_axes=[[0], [-1]]) + with i: + assert_equal(i[1].dtype, np.dtype('f8')) + assert_(i[1].dtype != b.dtype) + # Do the reduction + for x, y in i: + y[...] += x + # Since no axes were specified, should have allocated a scalar + assert_equal(b, np.sum(a)) + + a = np.arange(6).reshape(2, 3) + b = np.array([0, 0], dtype='f8').byteswap() + b = b.view(b.dtype.newbyteorder()) + i = nditer([a, b], ['reduce_ok', 'external_loop', 'buffered'], + [['readonly'], ['readwrite', 'nbo']], + op_axes=[[0, 1], [0, -1]]) + # Reduction shape/strides for the output + with i: + assert_equal(i[1].shape, (3,)) + assert_equal(i[1].strides, (0,)) + # Do the reduction + for x, y in i: + # Use a for loop instead of ``y[...] += x`` + # (equivalent to ``y[...] = y[...].copy() + x``), + # because y has zero strides we use for the reduction + for j in range(len(y)): + y[j] += x[j] + assert_equal(b, np.sum(a, axis=1)) + + # Iterator inner double loop was wrong on this one + p = np.arange(2) + 1 + it = np.nditer([p, None], + ['delay_bufalloc', 'reduce_ok', 'buffered', 'external_loop'], + [['readonly'], ['readwrite', 'allocate']], + op_axes=[[-1, 0], [-1, -1]], + itershape=(2, 2)) + with it: + it.operands[1].fill(0) + it.reset() + assert_equal(it[0], [1, 2, 1, 2]) + + # Iterator inner loop should take argument contiguity into account + x = np.ones((7, 13, 8), np.int8)[4:6,1:11:6,1:5].transpose(1, 2, 0) + x[...] = np.arange(x.size).reshape(x.shape) + y_base = np.arange(4*4, dtype=np.int8).reshape(4, 4) + y_base_copy = y_base.copy() + y = y_base[::2,:,None] + + it = np.nditer([y, x], + ['buffered', 'external_loop', 'reduce_ok'], + [['readwrite'], ['readonly']]) + with it: + for a, b in it: + a.fill(2) + + assert_equal(y_base[1::2], y_base_copy[1::2]) + assert_equal(y_base[::2], 2) + +def test_iter_buffering_reduction_reuse_reduce_loops(): + # There was a bug triggering reuse of the reduce loop inappropriately, + # which caused processing to happen in unnecessarily small chunks + # and overran the buffer. + + a = np.zeros((2, 7)) + b = np.zeros((1, 7)) + it = np.nditer([a, b], flags=['reduce_ok', 'external_loop', 'buffered'], + op_flags=[['readonly'], ['readwrite']], + buffersize=5) + + with it: + bufsizes = [x.shape[0] for x, y in it] + assert_equal(bufsizes, [5, 2, 5, 2]) + assert_equal(sum(bufsizes), a.size) + +def test_iter_writemasked_badinput(): + a = np.zeros((2, 3)) + b = np.zeros((3,)) + m = np.array([[True, True, False], [False, True, False]]) + m2 = np.array([True, True, False]) + m3 = np.array([0, 1, 1], dtype='u1') + mbad1 = np.array([0, 1, 1], dtype='i1') + mbad2 = np.array([0, 1, 1], dtype='f4') + + # Need an 'arraymask' if any operand is 'writemasked' + assert_raises(ValueError, nditer, [a, m], [], + [['readwrite', 'writemasked'], ['readonly']]) + + # A 'writemasked' operand must not be readonly + assert_raises(ValueError, nditer, [a, m], [], + [['readonly', 'writemasked'], ['readonly', 'arraymask']]) + + # 'writemasked' and 'arraymask' may not be used together + assert_raises(ValueError, nditer, [a, m], [], + [['readonly'], ['readwrite', 'arraymask', 'writemasked']]) + + # 'arraymask' may only be specified once + assert_raises(ValueError, nditer, [a, m, m2], [], + [['readwrite', 'writemasked'], + ['readonly', 'arraymask'], + ['readonly', 'arraymask']]) + + # An 'arraymask' with nothing 'writemasked' also doesn't make sense + assert_raises(ValueError, nditer, [a, m], [], + [['readwrite'], ['readonly', 'arraymask']]) + + # A writemasked reduction requires a similarly smaller mask + assert_raises(ValueError, nditer, [a, b, m], ['reduce_ok'], + [['readonly'], + ['readwrite', 'writemasked'], + ['readonly', 'arraymask']]) + # But this should work with a smaller/equal mask to the reduction operand + np.nditer([a, b, m2], ['reduce_ok'], + [['readonly'], + ['readwrite', 'writemasked'], + ['readonly', 'arraymask']]) + # The arraymask itself cannot be a reduction + assert_raises(ValueError, nditer, [a, b, m2], ['reduce_ok'], + [['readonly'], + ['readwrite', 'writemasked'], + ['readwrite', 'arraymask']]) + + # A uint8 mask is ok too + np.nditer([a, m3], ['buffered'], + [['readwrite', 'writemasked'], + ['readonly', 'arraymask']], + op_dtypes=['f4', None], + casting='same_kind') + # An int8 mask isn't ok + assert_raises(TypeError, np.nditer, [a, mbad1], ['buffered'], + [['readwrite', 'writemasked'], + ['readonly', 'arraymask']], + op_dtypes=['f4', None], + casting='same_kind') + # A float32 mask isn't ok + assert_raises(TypeError, np.nditer, [a, mbad2], ['buffered'], + [['readwrite', 'writemasked'], + ['readonly', 'arraymask']], + op_dtypes=['f4', None], + casting='same_kind') + + +def _is_buffered(iterator): + try: + iterator.itviews + except ValueError: + return True + return False + +@pytest.mark.parametrize("a", + [np.zeros((3,), dtype='f8'), + np.zeros((9876, 3*5), dtype='f8')[::2, :], + np.zeros((4, 312, 124, 3), dtype='f8')[::2, :, ::2, :], + # Also test with the last dimension strided (so it does not fit if + # there is repeated access) + np.zeros((9,), dtype='f8')[::3], + np.zeros((9876, 3*10), dtype='f8')[::2, ::5], + np.zeros((4, 312, 124, 3), dtype='f8')[::2, :, ::2, ::-1]]) +def test_iter_writemasked(a): + # Note, the slicing above is to ensure that nditer cannot combine multiple + # axes into one. The repetition is just to make things a bit more + # interesting. + shape = a.shape + reps = shape[-1] // 3 + msk = np.empty(shape, dtype=bool) + msk[...] = [True, True, False] * reps + + # When buffering is unused, 'writemasked' effectively does nothing. + # It's up to the user of the iterator to obey the requested semantics. + it = np.nditer([a, msk], [], + [['readwrite', 'writemasked'], + ['readonly', 'arraymask']]) + with it: + for x, m in it: + x[...] = 1 + # Because we violated the semantics, all the values became 1 + assert_equal(a, np.broadcast_to([1, 1, 1] * reps, shape)) + + # Even if buffering is enabled, we still may be accessing the array + # directly. + it = np.nditer([a, msk], ['buffered'], + [['readwrite', 'writemasked'], + ['readonly', 'arraymask']]) + # @seberg: I honestly don't currently understand why a "buffered" iterator + # would end up not using a buffer for the small array here at least when + # "writemasked" is used, that seems confusing... Check by testing for + # actual memory overlap! + is_buffered = True + with it: + for x, m in it: + x[...] = 2.5 + if np.may_share_memory(x, a): + is_buffered = False + + if not is_buffered: + # Because we violated the semantics, all the values became 2.5 + assert_equal(a, np.broadcast_to([2.5, 2.5, 2.5] * reps, shape)) + else: + # For large sizes, the iterator may be buffered: + assert_equal(a, np.broadcast_to([2.5, 2.5, 1] * reps, shape)) + a[...] = 2.5 + + # If buffering will definitely happening, for instance because of + # a cast, only the items selected by the mask will be copied back from + # the buffer. + it = np.nditer([a, msk], ['buffered'], + [['readwrite', 'writemasked'], + ['readonly', 'arraymask']], + op_dtypes=['i8', None], + casting='unsafe') + with it: + for x, m in it: + x[...] = 3 + # Even though we violated the semantics, only the selected values + # were copied back + assert_equal(a, np.broadcast_to([3, 3, 2.5] * reps, shape)) + + +@pytest.mark.parametrize(["mask", "mask_axes"], [ + # Allocated operand (only broadcasts with -1) + (None, [-1, 0]), + # Reduction along the first dimension (with and without op_axes) + (np.zeros((1, 4), dtype="bool"), [0, 1]), + (np.zeros((1, 4), dtype="bool"), None), + # Test 0-D and -1 op_axes + (np.zeros(4, dtype="bool"), [-1, 0]), + (np.zeros((), dtype="bool"), [-1, -1]), + (np.zeros((), dtype="bool"), None)]) +def test_iter_writemasked_broadcast_error(mask, mask_axes): + # This assumes that a readwrite mask makes sense. This is likely not the + # case and should simply be deprecated. + arr = np.zeros((3, 4)) + itflags = ["reduce_ok"] + mask_flags = ["arraymask", "readwrite", "allocate"] + a_flags = ["writeonly", "writemasked"] + if mask_axes is None: + op_axes = None + else: + op_axes = [mask_axes, [0, 1]] + + with assert_raises(ValueError): + np.nditer((mask, arr), flags=itflags, op_flags=[mask_flags, a_flags], + op_axes=op_axes) + + +def test_iter_writemasked_decref(): + # force casting (to make it interesting) by using a structured dtype. + arr = np.arange(10000).astype(">i,O") + original = arr.copy() + mask = np.random.randint(0, 2, size=10000).astype(bool) + + it = np.nditer([arr, mask], ['buffered', "refs_ok"], + [['readwrite', 'writemasked'], + ['readonly', 'arraymask']], + op_dtypes=[" string -> longdouble` for the + # conversion. But Python may refuse `str(int)` for huge ints. + # In that case, RuntimeWarning would be correct, but conversion + # fails earlier (seems to happen on 32bit linux, possibly only debug). + if dtype in "gG": + try: + str(too_big_int) + except ValueError: + pytest.skip("`huge_int -> string -> longdouble` failed") + + # Otherwise, we overflow to infinity: + with pytest.warns(RuntimeWarning): + res = scalar_type(1) + too_big_int + assert res.dtype == dtype + assert res == np.inf + + with pytest.warns(RuntimeWarning): + # We force the dtype here, since windows may otherwise pick the + # double instead of the longdouble loop. That leads to slightly + # different results (conversion of the int fails as above). + res = np.add(np.array(1, dtype=dtype), too_big_int, dtype=dtype) + assert res.dtype == dtype + assert res == np.inf + + +@pytest.mark.parametrize("op", [operator.add, operator.pow]) +def test_weak_promotion_scalar_path(op): + # Some additional paths exercising the weak scalars. + np._set_promotion_state("weak") + + # Integer path: + res = op(np.uint8(3), 5) + assert res == op(3, 5) + assert res.dtype == np.uint8 or res.dtype == bool + + with pytest.raises(OverflowError): + op(np.uint8(3), 1000) + + # Float path: + res = op(np.float32(3), 5.) + assert res == op(3., 5.) + assert res.dtype == np.float32 or res.dtype == bool + + +def test_nep50_complex_promotion(): + np._set_promotion_state("weak") + + with pytest.warns(RuntimeWarning, match=".*overflow"): + res = np.complex64(3) + complex(2**300) + + assert type(res) == np.complex64 + + +def test_nep50_integer_conversion_errors(): + # Do not worry about warnings here (auto-fixture will reset). + np._set_promotion_state("weak") + # Implementation for error paths is mostly missing (as of writing) + with pytest.raises(OverflowError, match=".*uint8"): + np.array([1], np.uint8) + 300 + + with pytest.raises(OverflowError, match=".*uint8"): + np.uint8(1) + 300 + + # Error message depends on platform (maybe unsigned int or unsigned long) + with pytest.raises(OverflowError, + match="Python integer -1 out of bounds for uint8"): + np.uint8(1) + -1 + + +def test_nep50_integer_regression(): + # Test the old integer promotion rules. When the integer is too large, + # we need to keep using the old-style promotion. + np._set_promotion_state("legacy") + arr = np.array(1) + assert (arr + 2**63).dtype == np.float64 + assert (arr[()] + 2**63).dtype == np.float64 + + +def test_nep50_with_axisconcatenator(): + # I promised that this will be an error in the future in the 1.25 + # release notes; test this (NEP 50 opt-in makes the deprecation an error). + np._set_promotion_state("weak") + + with pytest.raises(OverflowError): + np.r_[np.arange(5, dtype=np.int8), 255] + + +@pytest.mark.parametrize("ufunc", [np.add, np.power]) +@pytest.mark.parametrize("state", ["weak", "weak_and_warn"]) +def test_nep50_huge_integers(ufunc, state): + # Very large integers are complicated, because they go to uint64 or + # object dtype. This tests covers a few possible paths (some of which + # cannot give the NEP 50 warnings). + np._set_promotion_state(state) + + with pytest.raises(OverflowError): + ufunc(np.int64(0), 2**63) # 2**63 too large for int64 + + if state == "weak_and_warn": + with pytest.warns(UserWarning, + match="result dtype changed.*float64.*uint64"): + with pytest.raises(OverflowError): + ufunc(np.uint64(0), 2**64) + else: + with pytest.raises(OverflowError): + ufunc(np.uint64(0), 2**64) # 2**64 cannot be represented by uint64 + + # However, 2**63 can be represented by the uint64 (and that is used): + if state == "weak_and_warn": + with pytest.warns(UserWarning, + match="result dtype changed.*float64.*uint64"): + res = ufunc(np.uint64(1), 2**63) + else: + res = ufunc(np.uint64(1), 2**63) + + assert res.dtype == np.uint64 + assert res == ufunc(1, 2**63, dtype=object) + + # The following paths fail to warn correctly about the change: + with pytest.raises(OverflowError): + ufunc(np.int64(1), 2**63) # np.array(2**63) would go to uint + + with pytest.raises(OverflowError): + ufunc(np.int64(1), 2**100) # np.array(2**100) would go to object + + # This would go to object and thus a Python float, not a NumPy one: + res = ufunc(1.0, 2**100) + assert isinstance(res, np.float64) + + +def test_nep50_in_concat_and_choose(): + np._set_promotion_state("weak_and_warn") + + with pytest.warns(UserWarning, match="result dtype changed"): + res = np.concatenate([np.float32(1), 1.], axis=None) + assert res.dtype == "float32" + + with pytest.warns(UserWarning, match="result dtype changed"): + res = np.choose(1, [np.float32(1), 1.]) + assert res.dtype == "float32" + + +@pytest.mark.parametrize("expected,dtypes,optional_dtypes", [ + (np.float32, [np.float32], + [np.float16, 0.0, np.uint16, np.int16, np.int8, 0]), + (np.complex64, [np.float32, 0j], + [np.float16, 0.0, np.uint16, np.int16, np.int8, 0]), + (np.float32, [np.int16, np.uint16, np.float16], + [np.int8, np.uint8, np.float32, 0., 0]), + (np.int32, [np.int16, np.uint16], + [np.int8, np.uint8, 0, np.bool]), + ]) +@hypothesis.given(data=strategies.data()) +def test_expected_promotion(expected, dtypes, optional_dtypes, data): + np._set_promotion_state("weak") + + # Sample randomly while ensuring "dtypes" is always present: + optional = data.draw(strategies.lists( + strategies.sampled_from(dtypes + optional_dtypes))) + all_dtypes = dtypes + optional + dtypes_sample = data.draw(strategies.permutations(all_dtypes)) + + res = np.result_type(*dtypes_sample) + assert res == expected + + +@pytest.mark.parametrize("sctype", + [np.int8, np.int16, np.int32, np.int64, + np.uint8, np.uint16, np.uint32, np.uint64]) +@pytest.mark.parametrize("other_val", + [-2*100, -1, 0, 9, 10, 11, 2**63, 2*100]) +@pytest.mark.parametrize("comp", + [operator.eq, operator.ne, operator.le, operator.lt, + operator.ge, operator.gt]) +def test_integer_comparison(sctype, other_val, comp): + np._set_promotion_state("weak") + + # Test that comparisons with integers (especially out-of-bound) ones + # works correctly. + val_obj = 10 + val = sctype(val_obj) + # Check that the scalar behaves the same as the python int: + assert comp(10, other_val) == comp(val, other_val) + assert comp(val, other_val) == comp(10, other_val) + # Except for the result type: + assert type(comp(val, other_val)) is np.bool + + # Check that the integer array and object array behave the same: + val_obj = np.array([10, 10], dtype=object) + val = val_obj.astype(sctype) + assert_array_equal(comp(val_obj, other_val), comp(val, other_val)) + assert_array_equal(comp(other_val, val_obj), comp(other_val, val)) + + +@pytest.mark.parametrize("comp", + [np.equal, np.not_equal, np.less_equal, np.less, + np.greater_equal, np.greater]) +def test_integer_integer_comparison(comp): + np._set_promotion_state("weak") + + # Test that the NumPy comparison ufuncs work with large Python integers + assert comp(2**200, -2**200) == comp(2**200, -2**200, dtype=object) + + +def create_with_scalar(sctype, value): + return sctype(value) + + +def create_with_array(sctype, value): + return np.array([value], dtype=sctype) + + +@pytest.mark.parametrize("sctype", + [np.int8, np.int16, np.int32, np.int64, + np.uint8, np.uint16, np.uint32, np.uint64]) +@pytest.mark.parametrize("create", [create_with_scalar, create_with_array]) +def test_oob_creation(sctype, create): + iinfo = np.iinfo(sctype) + + with pytest.raises(OverflowError): + create(sctype, iinfo.min - 1) + + with pytest.raises(OverflowError): + create(sctype, iinfo.max + 1) + + with pytest.raises(OverflowError): + create(sctype, str(iinfo.min - 1)) + + with pytest.raises(OverflowError): + create(sctype, str(iinfo.max + 1)) + + assert create(sctype, iinfo.min) == iinfo.min + assert create(sctype, iinfo.max) == iinfo.max diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_numeric.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_numeric.py new file mode 100644 index 0000000000000000000000000000000000000000..eeaef657ac00d92149b840aecd1cade813de9f29 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_numeric.py @@ -0,0 +1,4089 @@ +import sys +import warnings +import itertools +import platform +import pytest +import math +from decimal import Decimal + +import numpy as np +from numpy._core import umath, sctypes +from numpy._core.numerictypes import obj2sctype +from numpy._core.arrayprint import set_string_function +from numpy.exceptions import AxisError +from numpy.random import rand, randint, randn +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_raises_regex, + assert_array_equal, assert_almost_equal, assert_array_almost_equal, + assert_warns, assert_array_max_ulp, HAS_REFCOUNT, IS_WASM + ) +from numpy._core._rational_tests import rational +from numpy import ma + +from hypothesis import given, strategies as st +from hypothesis.extra import numpy as hynp + + +class TestResize: + def test_copies(self): + A = np.array([[1, 2], [3, 4]]) + Ar1 = np.array([[1, 2, 3, 4], [1, 2, 3, 4]]) + assert_equal(np.resize(A, (2, 4)), Ar1) + + Ar2 = np.array([[1, 2], [3, 4], [1, 2], [3, 4]]) + assert_equal(np.resize(A, (4, 2)), Ar2) + + Ar3 = np.array([[1, 2, 3], [4, 1, 2], [3, 4, 1], [2, 3, 4]]) + assert_equal(np.resize(A, (4, 3)), Ar3) + + def test_repeats(self): + A = np.array([1, 2, 3]) + Ar1 = np.array([[1, 2, 3, 1], [2, 3, 1, 2]]) + assert_equal(np.resize(A, (2, 4)), Ar1) + + Ar2 = np.array([[1, 2], [3, 1], [2, 3], [1, 2]]) + assert_equal(np.resize(A, (4, 2)), Ar2) + + Ar3 = np.array([[1, 2, 3], [1, 2, 3], [1, 2, 3], [1, 2, 3]]) + assert_equal(np.resize(A, (4, 3)), Ar3) + + def test_zeroresize(self): + A = np.array([[1, 2], [3, 4]]) + Ar = np.resize(A, (0,)) + assert_array_equal(Ar, np.array([])) + assert_equal(A.dtype, Ar.dtype) + + Ar = np.resize(A, (0, 2)) + assert_equal(Ar.shape, (0, 2)) + + Ar = np.resize(A, (2, 0)) + assert_equal(Ar.shape, (2, 0)) + + def test_reshape_from_zero(self): + # See also gh-6740 + A = np.zeros(0, dtype=[('a', np.float32)]) + Ar = np.resize(A, (2, 1)) + assert_array_equal(Ar, np.zeros((2, 1), Ar.dtype)) + assert_equal(A.dtype, Ar.dtype) + + def test_negative_resize(self): + A = np.arange(0, 10, dtype=np.float32) + new_shape = (-10, -1) + with pytest.raises(ValueError, match=r"negative"): + np.resize(A, new_shape=new_shape) + + def test_subclass(self): + class MyArray(np.ndarray): + __array_priority__ = 1. + + my_arr = np.array([1]).view(MyArray) + assert type(np.resize(my_arr, 5)) is MyArray + assert type(np.resize(my_arr, 0)) is MyArray + + my_arr = np.array([]).view(MyArray) + assert type(np.resize(my_arr, 5)) is MyArray + + +class TestNonarrayArgs: + # check that non-array arguments to functions wrap them in arrays + def test_choose(self): + choices = [[0, 1, 2], + [3, 4, 5], + [5, 6, 7]] + tgt = [5, 1, 5] + a = [2, 0, 1] + + out = np.choose(a, choices) + assert_equal(out, tgt) + + def test_clip(self): + arr = [-1, 5, 2, 3, 10, -4, -9] + out = np.clip(arr, 2, 7) + tgt = [2, 5, 2, 3, 7, 2, 2] + assert_equal(out, tgt) + + def test_compress(self): + arr = [[0, 1, 2, 3, 4], + [5, 6, 7, 8, 9]] + tgt = [[5, 6, 7, 8, 9]] + out = np.compress([0, 1], arr, axis=0) + assert_equal(out, tgt) + + def test_count_nonzero(self): + arr = [[0, 1, 7, 0, 0], + [3, 0, 0, 2, 19]] + tgt = np.array([2, 3]) + out = np.count_nonzero(arr, axis=1) + assert_equal(out, tgt) + + def test_diagonal(self): + a = [[0, 1, 2, 3], + [4, 5, 6, 7], + [8, 9, 10, 11]] + out = np.diagonal(a) + tgt = [0, 5, 10] + + assert_equal(out, tgt) + + def test_mean(self): + A = [[1, 2, 3], [4, 5, 6]] + assert_(np.mean(A) == 3.5) + assert_(np.all(np.mean(A, 0) == np.array([2.5, 3.5, 4.5]))) + assert_(np.all(np.mean(A, 1) == np.array([2., 5.]))) + + with warnings.catch_warnings(record=True) as w: + warnings.filterwarnings('always', '', RuntimeWarning) + assert_(np.isnan(np.mean([]))) + assert_(w[0].category is RuntimeWarning) + + def test_ptp(self): + a = [3, 4, 5, 10, -3, -5, 6.0] + assert_equal(np.ptp(a, axis=0), 15.0) + + def test_prod(self): + arr = [[1, 2, 3, 4], + [5, 6, 7, 9], + [10, 3, 4, 5]] + tgt = [24, 1890, 600] + + assert_equal(np.prod(arr, axis=-1), tgt) + + def test_ravel(self): + a = [[1, 2, 3], [4, 5, 6], [7, 8, 9], [10, 11, 12]] + tgt = [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12] + assert_equal(np.ravel(a), tgt) + + def test_repeat(self): + a = [1, 2, 3] + tgt = [1, 1, 2, 2, 3, 3] + + out = np.repeat(a, 2) + assert_equal(out, tgt) + + def test_reshape(self): + arr = [[1, 2, 3], [4, 5, 6], [7, 8, 9], [10, 11, 12]] + tgt = [[1, 2, 3, 4, 5, 6], [7, 8, 9, 10, 11, 12]] + assert_equal(np.reshape(arr, (2, 6)), tgt) + + def test_round(self): + arr = [1.56, 72.54, 6.35, 3.25] + tgt = [1.6, 72.5, 6.4, 3.2] + assert_equal(np.around(arr, decimals=1), tgt) + s = np.float64(1.) + assert_(isinstance(s.round(), np.float64)) + assert_equal(s.round(), 1.) + + @pytest.mark.parametrize('dtype', [ + np.int8, np.int16, np.int32, np.int64, + np.uint8, np.uint16, np.uint32, np.uint64, + np.float16, np.float32, np.float64, + ]) + def test_dunder_round(self, dtype): + s = dtype(1) + assert_(isinstance(round(s), int)) + assert_(isinstance(round(s, None), int)) + assert_(isinstance(round(s, ndigits=None), int)) + assert_equal(round(s), 1) + assert_equal(round(s, None), 1) + assert_equal(round(s, ndigits=None), 1) + + @pytest.mark.parametrize('val, ndigits', [ + pytest.param(2**31 - 1, -1, + marks=pytest.mark.skip(reason="Out of range of int32") + ), + (2**31 - 1, 1-math.ceil(math.log10(2**31 - 1))), + (2**31 - 1, -math.ceil(math.log10(2**31 - 1))) + ]) + def test_dunder_round_edgecases(self, val, ndigits): + assert_equal(round(val, ndigits), round(np.int32(val), ndigits)) + + def test_dunder_round_accuracy(self): + f = np.float64(5.1 * 10**73) + assert_(isinstance(round(f, -73), np.float64)) + assert_array_max_ulp(round(f, -73), 5.0 * 10**73) + assert_(isinstance(round(f, ndigits=-73), np.float64)) + assert_array_max_ulp(round(f, ndigits=-73), 5.0 * 10**73) + + i = np.int64(501) + assert_(isinstance(round(i, -2), np.int64)) + assert_array_max_ulp(round(i, -2), 500) + assert_(isinstance(round(i, ndigits=-2), np.int64)) + assert_array_max_ulp(round(i, ndigits=-2), 500) + + @pytest.mark.xfail(raises=AssertionError, reason="gh-15896") + def test_round_py_consistency(self): + f = 5.1 * 10**73 + assert_equal(round(np.float64(f), -73), round(f, -73)) + + def test_searchsorted(self): + arr = [-8, -5, -1, 3, 6, 10] + out = np.searchsorted(arr, 0) + assert_equal(out, 3) + + def test_size(self): + A = [[1, 2, 3], [4, 5, 6]] + assert_(np.size(A) == 6) + assert_(np.size(A, 0) == 2) + assert_(np.size(A, 1) == 3) + + def test_squeeze(self): + A = [[[1, 1, 1], [2, 2, 2], [3, 3, 3]]] + assert_equal(np.squeeze(A).shape, (3, 3)) + assert_equal(np.squeeze(np.zeros((1, 3, 1))).shape, (3,)) + assert_equal(np.squeeze(np.zeros((1, 3, 1)), axis=0).shape, (3, 1)) + assert_equal(np.squeeze(np.zeros((1, 3, 1)), axis=-1).shape, (1, 3)) + assert_equal(np.squeeze(np.zeros((1, 3, 1)), axis=2).shape, (1, 3)) + assert_equal(np.squeeze([np.zeros((3, 1))]).shape, (3,)) + assert_equal(np.squeeze([np.zeros((3, 1))], axis=0).shape, (3, 1)) + assert_equal(np.squeeze([np.zeros((3, 1))], axis=2).shape, (1, 3)) + assert_equal(np.squeeze([np.zeros((3, 1))], axis=-1).shape, (1, 3)) + + def test_std(self): + A = [[1, 2, 3], [4, 5, 6]] + assert_almost_equal(np.std(A), 1.707825127659933) + assert_almost_equal(np.std(A, 0), np.array([1.5, 1.5, 1.5])) + assert_almost_equal(np.std(A, 1), np.array([0.81649658, 0.81649658])) + + with warnings.catch_warnings(record=True) as w: + warnings.filterwarnings('always', '', RuntimeWarning) + assert_(np.isnan(np.std([]))) + assert_(w[0].category is RuntimeWarning) + + def test_swapaxes(self): + tgt = [[[0, 4], [2, 6]], [[1, 5], [3, 7]]] + a = [[[0, 1], [2, 3]], [[4, 5], [6, 7]]] + out = np.swapaxes(a, 0, 2) + assert_equal(out, tgt) + + def test_sum(self): + m = [[1, 2, 3], + [4, 5, 6], + [7, 8, 9]] + tgt = [[6], [15], [24]] + out = np.sum(m, axis=1, keepdims=True) + + assert_equal(tgt, out) + + def test_take(self): + tgt = [2, 3, 5] + indices = [1, 2, 4] + a = [1, 2, 3, 4, 5] + + out = np.take(a, indices) + assert_equal(out, tgt) + + def test_trace(self): + c = [[1, 2], [3, 4], [5, 6]] + assert_equal(np.trace(c), 5) + + def test_transpose(self): + arr = [[1, 2], [3, 4], [5, 6]] + tgt = [[1, 3, 5], [2, 4, 6]] + assert_equal(np.transpose(arr, (1, 0)), tgt) + assert_equal(np.matrix_transpose(arr), tgt) + + def test_var(self): + A = [[1, 2, 3], [4, 5, 6]] + assert_almost_equal(np.var(A), 2.9166666666666665) + assert_almost_equal(np.var(A, 0), np.array([2.25, 2.25, 2.25])) + assert_almost_equal(np.var(A, 1), np.array([0.66666667, 0.66666667])) + + with warnings.catch_warnings(record=True) as w: + warnings.filterwarnings('always', '', RuntimeWarning) + assert_(np.isnan(np.var([]))) + assert_(w[0].category is RuntimeWarning) + + B = np.array([None, 0]) + B[0] = 1j + assert_almost_equal(np.var(B), 0.25) + + def test_std_with_mean_keyword(self): + # Setting the seed to make the test reproducible + rng = np.random.RandomState(1234) + A = rng.randn(10, 20, 5) + 0.5 + + mean_out = np.zeros((10, 1, 5)) + std_out = np.zeros((10, 1, 5)) + + mean = np.mean(A, + out=mean_out, + axis=1, + keepdims=True) + + # The returned object should be the object specified during calling + assert mean_out is mean + + std = np.std(A, + out=std_out, + axis=1, + keepdims=True, + mean=mean) + + # The returned object should be the object specified during calling + assert std_out is std + + # Shape of returned mean and std should be same + assert std.shape == mean.shape + assert std.shape == (10, 1, 5) + + # Output should be the same as from the individual algorithms + std_old = np.std(A, axis=1, keepdims=True) + + assert std_old.shape == mean.shape + assert_almost_equal(std, std_old) + + def test_var_with_mean_keyword(self): + # Setting the seed to make the test reproducible + rng = np.random.RandomState(1234) + A = rng.randn(10, 20, 5) + 0.5 + + mean_out = np.zeros((10, 1, 5)) + var_out = np.zeros((10, 1, 5)) + + mean = np.mean(A, + out=mean_out, + axis=1, + keepdims=True) + + # The returned object should be the object specified during calling + assert mean_out is mean + + var = np.var(A, + out=var_out, + axis=1, + keepdims=True, + mean=mean) + + # The returned object should be the object specified during calling + assert var_out is var + + # Shape of returned mean and var should be same + assert var.shape == mean.shape + assert var.shape == (10, 1, 5) + + # Output should be the same as from the individual algorithms + var_old = np.var(A, axis=1, keepdims=True) + + assert var_old.shape == mean.shape + assert_almost_equal(var, var_old) + + def test_std_with_mean_keyword_keepdims_false(self): + rng = np.random.RandomState(1234) + A = rng.randn(10, 20, 5) + 0.5 + + mean = np.mean(A, + axis=1, + keepdims=True) + + std = np.std(A, + axis=1, + keepdims=False, + mean=mean) + + # Shape of returned mean and std should be same + assert std.shape == (10, 5) + + # Output should be the same as from the individual algorithms + std_old = np.std(A, axis=1, keepdims=False) + mean_old = np.mean(A, axis=1, keepdims=False) + + assert std_old.shape == mean_old.shape + assert_equal(std, std_old) + + def test_var_with_mean_keyword_keepdims_false(self): + rng = np.random.RandomState(1234) + A = rng.randn(10, 20, 5) + 0.5 + + mean = np.mean(A, + axis=1, + keepdims=True) + + var = np.var(A, + axis=1, + keepdims=False, + mean=mean) + + # Shape of returned mean and var should be same + assert var.shape == (10, 5) + + # Output should be the same as from the individual algorithms + var_old = np.var(A, axis=1, keepdims=False) + mean_old = np.mean(A, axis=1, keepdims=False) + + assert var_old.shape == mean_old.shape + assert_equal(var, var_old) + + def test_std_with_mean_keyword_where_nontrivial(self): + rng = np.random.RandomState(1234) + A = rng.randn(10, 20, 5) + 0.5 + + where = A > 0.5 + + mean = np.mean(A, + axis=1, + keepdims=True, + where=where) + + std = np.std(A, + axis=1, + keepdims=False, + mean=mean, + where=where) + + # Shape of returned mean and std should be same + assert std.shape == (10, 5) + + # Output should be the same as from the individual algorithms + std_old = np.std(A, axis=1, where=where) + mean_old = np.mean(A, axis=1, where=where) + + assert std_old.shape == mean_old.shape + assert_equal(std, std_old) + + def test_var_with_mean_keyword_where_nontrivial(self): + rng = np.random.RandomState(1234) + A = rng.randn(10, 20, 5) + 0.5 + + where = A > 0.5 + + mean = np.mean(A, + axis=1, + keepdims=True, + where=where) + + var = np.var(A, + axis=1, + keepdims=False, + mean=mean, + where=where) + + # Shape of returned mean and var should be same + assert var.shape == (10, 5) + + # Output should be the same as from the individual algorithms + var_old = np.var(A, axis=1, where=where) + mean_old = np.mean(A, axis=1, where=where) + + assert var_old.shape == mean_old.shape + assert_equal(var, var_old) + + def test_std_with_mean_keyword_multiple_axis(self): + # Setting the seed to make the test reproducible + rng = np.random.RandomState(1234) + A = rng.randn(10, 20, 5) + 0.5 + + axis = (0, 2) + + mean = np.mean(A, + out=None, + axis=axis, + keepdims=True) + + std = np.std(A, + out=None, + axis=axis, + keepdims=False, + mean=mean) + + # Shape of returned mean and std should be same + assert std.shape == (20,) + + # Output should be the same as from the individual algorithms + std_old = np.std(A, axis=axis, keepdims=False) + + assert_almost_equal(std, std_old) + + def test_std_with_mean_keyword_axis_None(self): + # Setting the seed to make the test reproducible + rng = np.random.RandomState(1234) + A = rng.randn(10, 20, 5) + 0.5 + + axis = None + + mean = np.mean(A, + out=None, + axis=axis, + keepdims=True) + + std = np.std(A, + out=None, + axis=axis, + keepdims=False, + mean=mean) + + # Shape of returned mean and std should be same + assert std.shape == () + + # Output should be the same as from the individual algorithms + std_old = np.std(A, axis=axis, keepdims=False) + + assert_almost_equal(std, std_old) + + def test_std_with_mean_keyword_keepdims_true_masked(self): + + A = ma.array([[2., 3., 4., 5.], + [1., 2., 3., 4.]], + mask=[[True, False, True, False], + [True, False, True, False]]) + + B = ma.array([[100., 3., 104., 5.], + [101., 2., 103., 4.]], + mask=[[True, False, True, False], + [True, False, True, False]]) + + mean_out = ma.array([[0., 0., 0., 0.]], + mask=[[False, False, False, False]]) + std_out = ma.array([[0., 0., 0., 0.]], + mask=[[False, False, False, False]]) + + axis = 0 + + mean = np.mean(A, out=mean_out, + axis=axis, keepdims=True) + + std = np.std(A, out=std_out, + axis=axis, keepdims=True, + mean=mean) + + # Shape of returned mean and std should be same + assert std.shape == mean.shape + assert std.shape == (1, 4) + + # Output should be the same as from the individual algorithms + std_old = np.std(A, axis=axis, keepdims=True) + mean_old = np.mean(A, axis=axis, keepdims=True) + + assert std_old.shape == mean_old.shape + assert_almost_equal(std, std_old) + assert_almost_equal(mean, mean_old) + + assert mean_out is mean + assert std_out is std + + # masked elements should be ignored + mean_b = np.mean(B, axis=axis, keepdims=True) + std_b = np.std(B, axis=axis, keepdims=True, mean=mean_b) + assert_almost_equal(std, std_b) + assert_almost_equal(mean, mean_b) + + def test_var_with_mean_keyword_keepdims_true_masked(self): + + A = ma.array([[2., 3., 4., 5.], + [1., 2., 3., 4.]], + mask=[[True, False, True, False], + [True, False, True, False]]) + + B = ma.array([[100., 3., 104., 5.], + [101., 2., 103., 4.]], + mask=[[True, False, True, False], + [True, False, True, False]]) + + mean_out = ma.array([[0., 0., 0., 0.]], + mask=[[False, False, False, False]]) + var_out = ma.array([[0., 0., 0., 0.]], + mask=[[False, False, False, False]]) + + axis = 0 + + mean = np.mean(A, out=mean_out, + axis=axis, keepdims=True) + + var = np.var(A, out=var_out, + axis=axis, keepdims=True, + mean=mean) + + # Shape of returned mean and var should be same + assert var.shape == mean.shape + assert var.shape == (1, 4) + + # Output should be the same as from the individual algorithms + var_old = np.var(A, axis=axis, keepdims=True) + mean_old = np.mean(A, axis=axis, keepdims=True) + + assert var_old.shape == mean_old.shape + assert_almost_equal(var, var_old) + assert_almost_equal(mean, mean_old) + + assert mean_out is mean + assert var_out is var + + # masked elements should be ignored + mean_b = np.mean(B, axis=axis, keepdims=True) + var_b = np.var(B, axis=axis, keepdims=True, mean=mean_b) + assert_almost_equal(var, var_b) + assert_almost_equal(mean, mean_b) + + +class TestIsscalar: + def test_isscalar(self): + assert_(np.isscalar(3.1)) + assert_(np.isscalar(np.int16(12345))) + assert_(np.isscalar(False)) + assert_(np.isscalar('numpy')) + assert_(not np.isscalar([3.1])) + assert_(not np.isscalar(None)) + + # PEP 3141 + from fractions import Fraction + assert_(np.isscalar(Fraction(5, 17))) + from numbers import Number + assert_(np.isscalar(Number())) + + +class TestBoolScalar: + def test_logical(self): + f = np.False_ + t = np.True_ + s = "xyz" + assert_((t and s) is s) + assert_((f and s) is f) + + def test_bitwise_or(self): + f = np.False_ + t = np.True_ + assert_((t | t) is t) + assert_((f | t) is t) + assert_((t | f) is t) + assert_((f | f) is f) + + def test_bitwise_and(self): + f = np.False_ + t = np.True_ + assert_((t & t) is t) + assert_((f & t) is f) + assert_((t & f) is f) + assert_((f & f) is f) + + def test_bitwise_xor(self): + f = np.False_ + t = np.True_ + assert_((t ^ t) is f) + assert_((f ^ t) is t) + assert_((t ^ f) is t) + assert_((f ^ f) is f) + + +class TestBoolArray: + def setup_method(self): + # offset for simd tests + self.t = np.array([True] * 41, dtype=bool)[1::] + self.f = np.array([False] * 41, dtype=bool)[1::] + self.o = np.array([False] * 42, dtype=bool)[2::] + self.nm = self.f.copy() + self.im = self.t.copy() + self.nm[3] = True + self.nm[-2] = True + self.im[3] = False + self.im[-2] = False + + def test_all_any(self): + assert_(self.t.all()) + assert_(self.t.any()) + assert_(not self.f.all()) + assert_(not self.f.any()) + assert_(self.nm.any()) + assert_(self.im.any()) + assert_(not self.nm.all()) + assert_(not self.im.all()) + # check bad element in all positions + for i in range(256 - 7): + d = np.array([False] * 256, dtype=bool)[7::] + d[i] = True + assert_(np.any(d)) + e = np.array([True] * 256, dtype=bool)[7::] + e[i] = False + assert_(not np.all(e)) + assert_array_equal(e, ~d) + # big array test for blocked libc loops + for i in list(range(9, 6000, 507)) + [7764, 90021, -10]: + d = np.array([False] * 100043, dtype=bool) + d[i] = True + assert_(np.any(d), msg="%r" % i) + e = np.array([True] * 100043, dtype=bool) + e[i] = False + assert_(not np.all(e), msg="%r" % i) + + def test_logical_not_abs(self): + assert_array_equal(~self.t, self.f) + assert_array_equal(np.abs(~self.t), self.f) + assert_array_equal(np.abs(~self.f), self.t) + assert_array_equal(np.abs(self.f), self.f) + assert_array_equal(~np.abs(self.f), self.t) + assert_array_equal(~np.abs(self.t), self.f) + assert_array_equal(np.abs(~self.nm), self.im) + np.logical_not(self.t, out=self.o) + assert_array_equal(self.o, self.f) + np.abs(self.t, out=self.o) + assert_array_equal(self.o, self.t) + + def test_logical_and_or_xor(self): + assert_array_equal(self.t | self.t, self.t) + assert_array_equal(self.f | self.f, self.f) + assert_array_equal(self.t | self.f, self.t) + assert_array_equal(self.f | self.t, self.t) + np.logical_or(self.t, self.t, out=self.o) + assert_array_equal(self.o, self.t) + assert_array_equal(self.t & self.t, self.t) + assert_array_equal(self.f & self.f, self.f) + assert_array_equal(self.t & self.f, self.f) + assert_array_equal(self.f & self.t, self.f) + np.logical_and(self.t, self.t, out=self.o) + assert_array_equal(self.o, self.t) + assert_array_equal(self.t ^ self.t, self.f) + assert_array_equal(self.f ^ self.f, self.f) + assert_array_equal(self.t ^ self.f, self.t) + assert_array_equal(self.f ^ self.t, self.t) + np.logical_xor(self.t, self.t, out=self.o) + assert_array_equal(self.o, self.f) + + assert_array_equal(self.nm & self.t, self.nm) + assert_array_equal(self.im & self.f, False) + assert_array_equal(self.nm & True, self.nm) + assert_array_equal(self.im & False, self.f) + assert_array_equal(self.nm | self.t, self.t) + assert_array_equal(self.im | self.f, self.im) + assert_array_equal(self.nm | True, self.t) + assert_array_equal(self.im | False, self.im) + assert_array_equal(self.nm ^ self.t, self.im) + assert_array_equal(self.im ^ self.f, self.im) + assert_array_equal(self.nm ^ True, self.im) + assert_array_equal(self.im ^ False, self.im) + + +class TestBoolCmp: + def setup_method(self): + self.f = np.ones(256, dtype=np.float32) + self.ef = np.ones(self.f.size, dtype=bool) + self.d = np.ones(128, dtype=np.float64) + self.ed = np.ones(self.d.size, dtype=bool) + # generate values for all permutation of 256bit simd vectors + s = 0 + for i in range(32): + self.f[s:s+8] = [i & 2**x for x in range(8)] + self.ef[s:s+8] = [(i & 2**x) != 0 for x in range(8)] + s += 8 + s = 0 + for i in range(16): + self.d[s:s+4] = [i & 2**x for x in range(4)] + self.ed[s:s+4] = [(i & 2**x) != 0 for x in range(4)] + s += 4 + + self.nf = self.f.copy() + self.nd = self.d.copy() + self.nf[self.ef] = np.nan + self.nd[self.ed] = np.nan + + self.inff = self.f.copy() + self.infd = self.d.copy() + self.inff[::3][self.ef[::3]] = np.inf + self.infd[::3][self.ed[::3]] = np.inf + self.inff[1::3][self.ef[1::3]] = -np.inf + self.infd[1::3][self.ed[1::3]] = -np.inf + self.inff[2::3][self.ef[2::3]] = np.nan + self.infd[2::3][self.ed[2::3]] = np.nan + self.efnonan = self.ef.copy() + self.efnonan[2::3] = False + self.ednonan = self.ed.copy() + self.ednonan[2::3] = False + + self.signf = self.f.copy() + self.signd = self.d.copy() + self.signf[self.ef] *= -1. + self.signd[self.ed] *= -1. + self.signf[1::6][self.ef[1::6]] = -np.inf + self.signd[1::6][self.ed[1::6]] = -np.inf + # On RISC-V, many operations that produce NaNs, such as converting + # a -NaN from f64 to f32, return a canonical NaN. The canonical + # NaNs are always positive. See section 11.3 NaN Generation and + # Propagation of the RISC-V Unprivileged ISA for more details. + # We disable the float32 sign test on riscv64 for -np.nan as the sign + # of the NaN will be lost when it's converted to a float32. + if platform.processor() != 'riscv64': + self.signf[3::6][self.ef[3::6]] = -np.nan + self.signd[3::6][self.ed[3::6]] = -np.nan + self.signf[4::6][self.ef[4::6]] = -0. + self.signd[4::6][self.ed[4::6]] = -0. + + def test_float(self): + # offset for alignment test + for i in range(4): + assert_array_equal(self.f[i:] > 0, self.ef[i:]) + assert_array_equal(self.f[i:] - 1 >= 0, self.ef[i:]) + assert_array_equal(self.f[i:] == 0, ~self.ef[i:]) + assert_array_equal(-self.f[i:] < 0, self.ef[i:]) + assert_array_equal(-self.f[i:] + 1 <= 0, self.ef[i:]) + r = self.f[i:] != 0 + assert_array_equal(r, self.ef[i:]) + r2 = self.f[i:] != np.zeros_like(self.f[i:]) + r3 = 0 != self.f[i:] + assert_array_equal(r, r2) + assert_array_equal(r, r3) + # check bool == 0x1 + assert_array_equal(r.view(np.int8), r.astype(np.int8)) + assert_array_equal(r2.view(np.int8), r2.astype(np.int8)) + assert_array_equal(r3.view(np.int8), r3.astype(np.int8)) + + # isnan on amd64 takes the same code path + assert_array_equal(np.isnan(self.nf[i:]), self.ef[i:]) + assert_array_equal(np.isfinite(self.nf[i:]), ~self.ef[i:]) + assert_array_equal(np.isfinite(self.inff[i:]), ~self.ef[i:]) + assert_array_equal(np.isinf(self.inff[i:]), self.efnonan[i:]) + assert_array_equal(np.signbit(self.signf[i:]), self.ef[i:]) + + def test_double(self): + # offset for alignment test + for i in range(2): + assert_array_equal(self.d[i:] > 0, self.ed[i:]) + assert_array_equal(self.d[i:] - 1 >= 0, self.ed[i:]) + assert_array_equal(self.d[i:] == 0, ~self.ed[i:]) + assert_array_equal(-self.d[i:] < 0, self.ed[i:]) + assert_array_equal(-self.d[i:] + 1 <= 0, self.ed[i:]) + r = self.d[i:] != 0 + assert_array_equal(r, self.ed[i:]) + r2 = self.d[i:] != np.zeros_like(self.d[i:]) + r3 = 0 != self.d[i:] + assert_array_equal(r, r2) + assert_array_equal(r, r3) + # check bool == 0x1 + assert_array_equal(r.view(np.int8), r.astype(np.int8)) + assert_array_equal(r2.view(np.int8), r2.astype(np.int8)) + assert_array_equal(r3.view(np.int8), r3.astype(np.int8)) + + # isnan on amd64 takes the same code path + assert_array_equal(np.isnan(self.nd[i:]), self.ed[i:]) + assert_array_equal(np.isfinite(self.nd[i:]), ~self.ed[i:]) + assert_array_equal(np.isfinite(self.infd[i:]), ~self.ed[i:]) + assert_array_equal(np.isinf(self.infd[i:]), self.ednonan[i:]) + assert_array_equal(np.signbit(self.signd[i:]), self.ed[i:]) + + +class TestSeterr: + def test_default(self): + err = np.geterr() + assert_equal(err, + dict(divide='warn', + invalid='warn', + over='warn', + under='ignore') + ) + + def test_set(self): + with np.errstate(): + err = np.seterr() + old = np.seterr(divide='print') + assert_(err == old) + new = np.seterr() + assert_(new['divide'] == 'print') + np.seterr(over='raise') + assert_(np.geterr()['over'] == 'raise') + assert_(new['divide'] == 'print') + np.seterr(**old) + assert_(np.geterr() == old) + + @pytest.mark.skipif(IS_WASM, reason="no wasm fp exception support") + @pytest.mark.skipif(platform.machine() == "armv5tel", reason="See gh-413.") + def test_divide_err(self): + with np.errstate(divide='raise'): + with assert_raises(FloatingPointError): + np.array([1.]) / np.array([0.]) + + np.seterr(divide='ignore') + np.array([1.]) / np.array([0.]) + + +class TestFloatExceptions: + def assert_raises_fpe(self, fpeerr, flop, x, y): + ftype = type(x) + try: + flop(x, y) + assert_(False, + "Type %s did not raise fpe error '%s'." % (ftype, fpeerr)) + except FloatingPointError as exc: + assert_(str(exc).find(fpeerr) >= 0, + "Type %s raised wrong fpe error '%s'." % (ftype, exc)) + + def assert_op_raises_fpe(self, fpeerr, flop, sc1, sc2): + # Check that fpe exception is raised. + # + # Given a floating operation `flop` and two scalar values, check that + # the operation raises the floating point exception specified by + # `fpeerr`. Tests all variants with 0-d array scalars as well. + + self.assert_raises_fpe(fpeerr, flop, sc1, sc2) + self.assert_raises_fpe(fpeerr, flop, sc1[()], sc2) + self.assert_raises_fpe(fpeerr, flop, sc1, sc2[()]) + self.assert_raises_fpe(fpeerr, flop, sc1[()], sc2[()]) + + # Test for all real and complex float types + @pytest.mark.skipif(IS_WASM, reason="no wasm fp exception support") + @pytest.mark.parametrize("typecode", np.typecodes["AllFloat"]) + def test_floating_exceptions(self, typecode): + if 'bsd' in sys.platform and typecode in 'gG': + pytest.skip(reason="Fallback impl for (c)longdouble may not raise " + "FPE errors as expected on BSD OSes, " + "see gh-24876, gh-23379") + + # Test basic arithmetic function errors + with np.errstate(all='raise'): + ftype = obj2sctype(typecode) + if np.dtype(ftype).kind == 'f': + # Get some extreme values for the type + fi = np.finfo(ftype) + ft_tiny = fi._machar.tiny + ft_max = fi.max + ft_eps = fi.eps + underflow = 'underflow' + divbyzero = 'divide by zero' + else: + # 'c', complex, corresponding real dtype + rtype = type(ftype(0).real) + fi = np.finfo(rtype) + ft_tiny = ftype(fi._machar.tiny) + ft_max = ftype(fi.max) + ft_eps = ftype(fi.eps) + # The complex types raise different exceptions + underflow = '' + divbyzero = '' + overflow = 'overflow' + invalid = 'invalid' + + # The value of tiny for double double is NaN, so we need to + # pass the assert + if not np.isnan(ft_tiny): + self.assert_raises_fpe(underflow, + lambda a, b: a/b, ft_tiny, ft_max) + self.assert_raises_fpe(underflow, + lambda a, b: a*b, ft_tiny, ft_tiny) + self.assert_raises_fpe(overflow, + lambda a, b: a*b, ft_max, ftype(2)) + self.assert_raises_fpe(overflow, + lambda a, b: a/b, ft_max, ftype(0.5)) + self.assert_raises_fpe(overflow, + lambda a, b: a+b, ft_max, ft_max*ft_eps) + self.assert_raises_fpe(overflow, + lambda a, b: a-b, -ft_max, ft_max*ft_eps) + self.assert_raises_fpe(overflow, + np.power, ftype(2), ftype(2**fi.nexp)) + self.assert_raises_fpe(divbyzero, + lambda a, b: a/b, ftype(1), ftype(0)) + self.assert_raises_fpe( + invalid, lambda a, b: a/b, ftype(np.inf), ftype(np.inf) + ) + self.assert_raises_fpe(invalid, + lambda a, b: a/b, ftype(0), ftype(0)) + self.assert_raises_fpe( + invalid, lambda a, b: a-b, ftype(np.inf), ftype(np.inf) + ) + self.assert_raises_fpe( + invalid, lambda a, b: a+b, ftype(np.inf), ftype(-np.inf) + ) + self.assert_raises_fpe(invalid, + lambda a, b: a*b, ftype(0), ftype(np.inf)) + + @pytest.mark.skipif(IS_WASM, reason="no wasm fp exception support") + def test_warnings(self): + # test warning code path + with warnings.catch_warnings(record=True) as w: + warnings.simplefilter("always") + with np.errstate(all="warn"): + np.divide(1, 0.) + assert_equal(len(w), 1) + assert_("divide by zero" in str(w[0].message)) + np.array(1e300) * np.array(1e300) + assert_equal(len(w), 2) + assert_("overflow" in str(w[-1].message)) + np.array(np.inf) - np.array(np.inf) + assert_equal(len(w), 3) + assert_("invalid value" in str(w[-1].message)) + np.array(1e-300) * np.array(1e-300) + assert_equal(len(w), 4) + assert_("underflow" in str(w[-1].message)) + + +class TestTypes: + def check_promotion_cases(self, promote_func): + # tests that the scalars get coerced correctly. + b = np.bool(0) + i8, i16, i32, i64 = np.int8(0), np.int16(0), np.int32(0), np.int64(0) + u8, u16, u32, u64 = np.uint8(0), np.uint16(0), np.uint32(0), np.uint64(0) + f32, f64, fld = np.float32(0), np.float64(0), np.longdouble(0) + c64, c128, cld = np.complex64(0), np.complex128(0), np.clongdouble(0) + + # coercion within the same kind + assert_equal(promote_func(i8, i16), np.dtype(np.int16)) + assert_equal(promote_func(i32, i8), np.dtype(np.int32)) + assert_equal(promote_func(i16, i64), np.dtype(np.int64)) + assert_equal(promote_func(u8, u32), np.dtype(np.uint32)) + assert_equal(promote_func(f32, f64), np.dtype(np.float64)) + assert_equal(promote_func(fld, f32), np.dtype(np.longdouble)) + assert_equal(promote_func(f64, fld), np.dtype(np.longdouble)) + assert_equal(promote_func(c128, c64), np.dtype(np.complex128)) + assert_equal(promote_func(cld, c128), np.dtype(np.clongdouble)) + assert_equal(promote_func(c64, fld), np.dtype(np.clongdouble)) + + # coercion between kinds + assert_equal(promote_func(b, i32), np.dtype(np.int32)) + assert_equal(promote_func(b, u8), np.dtype(np.uint8)) + assert_equal(promote_func(i8, u8), np.dtype(np.int16)) + assert_equal(promote_func(u8, i32), np.dtype(np.int32)) + assert_equal(promote_func(i64, u32), np.dtype(np.int64)) + assert_equal(promote_func(u64, i32), np.dtype(np.float64)) + assert_equal(promote_func(i32, f32), np.dtype(np.float64)) + assert_equal(promote_func(i64, f32), np.dtype(np.float64)) + assert_equal(promote_func(f32, i16), np.dtype(np.float32)) + assert_equal(promote_func(f32, u32), np.dtype(np.float64)) + assert_equal(promote_func(f32, c64), np.dtype(np.complex64)) + assert_equal(promote_func(c128, f32), np.dtype(np.complex128)) + assert_equal(promote_func(cld, f64), np.dtype(np.clongdouble)) + + # coercion between scalars and 1-D arrays + assert_equal(promote_func(np.array([b]), i8), np.dtype(np.int8)) + assert_equal(promote_func(np.array([b]), u8), np.dtype(np.uint8)) + assert_equal(promote_func(np.array([b]), i32), np.dtype(np.int32)) + assert_equal(promote_func(np.array([b]), u32), np.dtype(np.uint32)) + assert_equal(promote_func(np.array([i8]), i64), np.dtype(np.int64)) + # unsigned and signed unfortunately tend to promote to float64: + assert_equal(promote_func(u64, np.array([i32])), np.dtype(np.float64)) + assert_equal(promote_func(i64, np.array([u32])), np.dtype(np.int64)) + assert_equal(promote_func(np.array([u16]), i32), np.dtype(np.int32)) + assert_equal(promote_func(np.int32(-1), np.array([u64])), + np.dtype(np.float64)) + assert_equal(promote_func(f64, np.array([f32])), np.dtype(np.float64)) + assert_equal(promote_func(fld, np.array([f32])), + np.dtype(np.longdouble)) + assert_equal(promote_func(np.array([f64]), fld), + np.dtype(np.longdouble)) + assert_equal(promote_func(fld, np.array([c64])), + np.dtype(np.clongdouble)) + assert_equal(promote_func(c64, np.array([f64])), + np.dtype(np.complex128)) + assert_equal(promote_func(np.complex64(3j), np.array([f64])), + np.dtype(np.complex128)) + assert_equal(promote_func(np.array([f32]), c128), + np.dtype(np.complex128)) + + # coercion between scalars and 1-D arrays, where + # the scalar has greater kind than the array + assert_equal(promote_func(np.array([b]), f64), np.dtype(np.float64)) + assert_equal(promote_func(np.array([b]), i64), np.dtype(np.int64)) + assert_equal(promote_func(np.array([b]), u64), np.dtype(np.uint64)) + assert_equal(promote_func(np.array([i8]), f64), np.dtype(np.float64)) + assert_equal(promote_func(np.array([u16]), f64), np.dtype(np.float64)) + + + def test_coercion(self): + def res_type(a, b): + return np.add(a, b).dtype + + self.check_promotion_cases(res_type) + + # Use-case: float/complex scalar * bool/int8 array + # shouldn't narrow the float/complex type + for a in [np.array([True, False]), np.array([-3, 12], dtype=np.int8)]: + b = 1.234 * a + assert_equal(b.dtype, np.dtype('f8'), "array type %s" % a.dtype) + b = np.longdouble(1.234) * a + assert_equal(b.dtype, np.dtype(np.longdouble), + "array type %s" % a.dtype) + b = np.float64(1.234) * a + assert_equal(b.dtype, np.dtype('f8'), "array type %s" % a.dtype) + b = np.float32(1.234) * a + assert_equal(b.dtype, np.dtype('f4'), "array type %s" % a.dtype) + b = np.float16(1.234) * a + assert_equal(b.dtype, np.dtype('f2'), "array type %s" % a.dtype) + + b = 1.234j * a + assert_equal(b.dtype, np.dtype('c16'), "array type %s" % a.dtype) + b = np.clongdouble(1.234j) * a + assert_equal(b.dtype, np.dtype(np.clongdouble), + "array type %s" % a.dtype) + b = np.complex128(1.234j) * a + assert_equal(b.dtype, np.dtype('c16'), "array type %s" % a.dtype) + b = np.complex64(1.234j) * a + assert_equal(b.dtype, np.dtype('c8'), "array type %s" % a.dtype) + + # The following use-case is problematic, and to resolve its + # tricky side-effects requires more changes. + # + # Use-case: (1-t)*a, where 't' is a boolean array and 'a' is + # a float32, shouldn't promote to float64 + # + # a = np.array([1.0, 1.5], dtype=np.float32) + # t = np.array([True, False]) + # b = t*a + # assert_equal(b, [1.0, 0.0]) + # assert_equal(b.dtype, np.dtype('f4')) + # b = (1-t)*a + # assert_equal(b, [0.0, 1.5]) + # assert_equal(b.dtype, np.dtype('f4')) + # + # Probably ~t (bitwise negation) is more proper to use here, + # but this is arguably less intuitive to understand at a glance, and + # would fail if 't' is actually an integer array instead of boolean: + # + # b = (~t)*a + # assert_equal(b, [0.0, 1.5]) + # assert_equal(b.dtype, np.dtype('f4')) + + def test_result_type(self): + self.check_promotion_cases(np.result_type) + assert_(np.result_type(None) == np.dtype(None)) + + def test_promote_types_endian(self): + # promote_types should always return native-endian types + assert_equal(np.promote_types('i8', '>i8'), np.dtype('i8')) + + assert_equal(np.promote_types('>i8', '>U16'), np.dtype('U21')) + assert_equal(np.promote_types('U16', '>i8'), np.dtype('U21')) + assert_equal(np.promote_types('S5', '>U8'), np.dtype('U8')) + assert_equal(np.promote_types('U8', '>S5'), np.dtype('U8')) + assert_equal(np.promote_types('U8', '>U5'), np.dtype('U8')) + + assert_equal(np.promote_types('M8', '>M8'), np.dtype('M8')) + assert_equal(np.promote_types('m8', '>m8'), np.dtype('m8')) + + def test_can_cast_and_promote_usertypes(self): + # The rational type defines safe casting for signed integers, + # boolean. Rational itself *does* cast safely to double. + # (rational does not actually cast to all signed integers, e.g. + # int64 can be both long and longlong and it registers only the first) + valid_types = ["int8", "int16", "int32", "int64", "bool"] + invalid_types = "BHILQP" + "FDG" + "mM" + "f" + "V" + + rational_dt = np.dtype(rational) + for numpy_dtype in valid_types: + numpy_dtype = np.dtype(numpy_dtype) + assert np.can_cast(numpy_dtype, rational_dt) + assert np.promote_types(numpy_dtype, rational_dt) is rational_dt + + for numpy_dtype in invalid_types: + numpy_dtype = np.dtype(numpy_dtype) + assert not np.can_cast(numpy_dtype, rational_dt) + with pytest.raises(TypeError): + np.promote_types(numpy_dtype, rational_dt) + + double_dt = np.dtype("double") + assert np.can_cast(rational_dt, double_dt) + assert np.promote_types(double_dt, rational_dt) is double_dt + + @pytest.mark.parametrize("swap", ["", "swap"]) + @pytest.mark.parametrize("string_dtype", ["U", "S"]) + def test_promote_types_strings(self, swap, string_dtype): + if swap == "swap": + promote_types = lambda a, b: np.promote_types(b, a) + else: + promote_types = np.promote_types + + S = string_dtype + + # Promote numeric with unsized string: + assert_equal(promote_types('bool', S), np.dtype(S+'5')) + assert_equal(promote_types('b', S), np.dtype(S+'4')) + assert_equal(promote_types('u1', S), np.dtype(S+'3')) + assert_equal(promote_types('u2', S), np.dtype(S+'5')) + assert_equal(promote_types('u4', S), np.dtype(S+'10')) + assert_equal(promote_types('u8', S), np.dtype(S+'20')) + assert_equal(promote_types('i1', S), np.dtype(S+'4')) + assert_equal(promote_types('i2', S), np.dtype(S+'6')) + assert_equal(promote_types('i4', S), np.dtype(S+'11')) + assert_equal(promote_types('i8', S), np.dtype(S+'21')) + # Promote numeric with sized string: + assert_equal(promote_types('bool', S+'1'), np.dtype(S+'5')) + assert_equal(promote_types('bool', S+'30'), np.dtype(S+'30')) + assert_equal(promote_types('b', S+'1'), np.dtype(S+'4')) + assert_equal(promote_types('b', S+'30'), np.dtype(S+'30')) + assert_equal(promote_types('u1', S+'1'), np.dtype(S+'3')) + assert_equal(promote_types('u1', S+'30'), np.dtype(S+'30')) + assert_equal(promote_types('u2', S+'1'), np.dtype(S+'5')) + assert_equal(promote_types('u2', S+'30'), np.dtype(S+'30')) + assert_equal(promote_types('u4', S+'1'), np.dtype(S+'10')) + assert_equal(promote_types('u4', S+'30'), np.dtype(S+'30')) + assert_equal(promote_types('u8', S+'1'), np.dtype(S+'20')) + assert_equal(promote_types('u8', S+'30'), np.dtype(S+'30')) + # Promote with object: + assert_equal(promote_types('O', S+'30'), np.dtype('O')) + + @pytest.mark.parametrize(["dtype1", "dtype2"], + [[np.dtype("V6"), np.dtype("V10")], # mismatch shape + # Mismatching names: + [np.dtype([("name1", "i8")]), np.dtype([("name2", "i8")])], + ]) + def test_invalid_void_promotion(self, dtype1, dtype2): + with pytest.raises(TypeError): + np.promote_types(dtype1, dtype2) + + @pytest.mark.parametrize(["dtype1", "dtype2"], + [[np.dtype("V10"), np.dtype("V10")], + [np.dtype([("name1", "i8")]), + np.dtype([("name1", np.dtype("i8").newbyteorder())])], + [np.dtype("i8,i8"), np.dtype("i8,>i8")], + [np.dtype("i8,i8"), np.dtype("i4,i4")], + ]) + def test_valid_void_promotion(self, dtype1, dtype2): + assert np.promote_types(dtype1, dtype2) == dtype1 + + @pytest.mark.parametrize("dtype", + list(np.typecodes["All"]) + + ["i,i", "10i", "S3", "S100", "U3", "U100", rational]) + def test_promote_identical_types_metadata(self, dtype): + # The same type passed in twice to promote types always + # preserves metadata + metadata = {1: 1} + dtype = np.dtype(dtype, metadata=metadata) + + res = np.promote_types(dtype, dtype) + assert res.metadata == dtype.metadata + + # byte-swapping preserves and makes the dtype native: + dtype = dtype.newbyteorder() + if dtype.isnative: + # The type does not have byte swapping + return + + res = np.promote_types(dtype, dtype) + + # Metadata is (currently) generally lost on byte-swapping (except for + # unicode. + if dtype.char != "U": + assert res.metadata is None + else: + assert res.metadata == metadata + assert res.isnative + + @pytest.mark.slow + @pytest.mark.filterwarnings('ignore:Promotion of numbers:FutureWarning') + @pytest.mark.parametrize(["dtype1", "dtype2"], + itertools.product( + list(np.typecodes["All"]) + + ["i,i", "S3", "S100", "U3", "U100", rational], + repeat=2)) + def test_promote_types_metadata(self, dtype1, dtype2): + """Metadata handling in promotion does not appear formalized + right now in NumPy. This test should thus be considered to + document behaviour, rather than test the correct definition of it. + + This test is very ugly, it was useful for rewriting part of the + promotion, but probably should eventually be replaced/deleted + (i.e. when metadata handling in promotion is better defined). + """ + metadata1 = {1: 1} + metadata2 = {2: 2} + dtype1 = np.dtype(dtype1, metadata=metadata1) + dtype2 = np.dtype(dtype2, metadata=metadata2) + + try: + res = np.promote_types(dtype1, dtype2) + except TypeError: + # Promotion failed, this test only checks metadata + return + + if res.char not in "USV" or res.names is not None or res.shape != (): + # All except string dtypes (and unstructured void) lose metadata + # on promotion (unless both dtypes are identical). + # At some point structured ones did not, but were restrictive. + assert res.metadata is None + elif res == dtype1: + # If one result is the result, it is usually returned unchanged: + assert res is dtype1 + elif res == dtype2: + # dtype1 may have been cast to the same type/kind as dtype2. + # If the resulting dtype is identical we currently pick the cast + # version of dtype1, which lost the metadata: + if np.promote_types(dtype1, dtype2.kind) == dtype2: + res.metadata is None + else: + res.metadata == metadata2 + else: + assert res.metadata is None + + # Try again for byteswapped version + dtype1 = dtype1.newbyteorder() + assert dtype1.metadata == metadata1 + res_bs = np.promote_types(dtype1, dtype2) + assert res_bs == res + assert res_bs.metadata == res.metadata + + def test_can_cast(self): + assert_(np.can_cast(np.int32, np.int64)) + assert_(np.can_cast(np.float64, complex)) + assert_(not np.can_cast(complex, float)) + + assert_(np.can_cast('i8', 'f8')) + assert_(not np.can_cast('i8', 'f4')) + assert_(np.can_cast('i4', 'S11')) + + assert_(np.can_cast('i8', 'i8', 'no')) + assert_(not np.can_cast('i8', 'no')) + + assert_(np.can_cast('i8', 'equiv')) + assert_(not np.can_cast('i8', 'equiv')) + + assert_(np.can_cast('i8', 'safe')) + assert_(not np.can_cast('i4', 'safe')) + + assert_(np.can_cast('i4', 'same_kind')) + assert_(not np.can_cast('u4', 'same_kind')) + + assert_(np.can_cast('u4', 'unsafe')) + + assert_(np.can_cast('bool', 'S5')) + assert_(not np.can_cast('bool', 'S4')) + + assert_(np.can_cast('b', 'S4')) + assert_(not np.can_cast('b', 'S3')) + + assert_(np.can_cast('u1', 'S3')) + assert_(not np.can_cast('u1', 'S2')) + assert_(np.can_cast('u2', 'S5')) + assert_(not np.can_cast('u2', 'S4')) + assert_(np.can_cast('u4', 'S10')) + assert_(not np.can_cast('u4', 'S9')) + assert_(np.can_cast('u8', 'S20')) + assert_(not np.can_cast('u8', 'S19')) + + assert_(np.can_cast('i1', 'S4')) + assert_(not np.can_cast('i1', 'S3')) + assert_(np.can_cast('i2', 'S6')) + assert_(not np.can_cast('i2', 'S5')) + assert_(np.can_cast('i4', 'S11')) + assert_(not np.can_cast('i4', 'S10')) + assert_(np.can_cast('i8', 'S21')) + assert_(not np.can_cast('i8', 'S20')) + + assert_(np.can_cast('bool', 'S5')) + assert_(not np.can_cast('bool', 'S4')) + + assert_(np.can_cast('b', 'U4')) + assert_(not np.can_cast('b', 'U3')) + + assert_(np.can_cast('u1', 'U3')) + assert_(not np.can_cast('u1', 'U2')) + assert_(np.can_cast('u2', 'U5')) + assert_(not np.can_cast('u2', 'U4')) + assert_(np.can_cast('u4', 'U10')) + assert_(not np.can_cast('u4', 'U9')) + assert_(np.can_cast('u8', 'U20')) + assert_(not np.can_cast('u8', 'U19')) + + assert_(np.can_cast('i1', 'U4')) + assert_(not np.can_cast('i1', 'U3')) + assert_(np.can_cast('i2', 'U6')) + assert_(not np.can_cast('i2', 'U5')) + assert_(np.can_cast('i4', 'U11')) + assert_(not np.can_cast('i4', 'U10')) + assert_(np.can_cast('i8', 'U21')) + assert_(not np.can_cast('i8', 'U20')) + + assert_raises(TypeError, np.can_cast, 'i4', None) + assert_raises(TypeError, np.can_cast, None, 'i4') + + # Also test keyword arguments + assert_(np.can_cast(from_=np.int32, to=np.int64)) + + def test_can_cast_simple_to_structured(self): + # Non-structured can only be cast to structured in 'unsafe' mode. + assert_(not np.can_cast('i4', 'i4,i4')) + assert_(not np.can_cast('i4', 'i4,i2')) + assert_(np.can_cast('i4', 'i4,i4', casting='unsafe')) + assert_(np.can_cast('i4', 'i4,i2', casting='unsafe')) + # Even if there is just a single field which is OK. + assert_(not np.can_cast('i2', [('f1', 'i4')])) + assert_(not np.can_cast('i2', [('f1', 'i4')], casting='same_kind')) + assert_(np.can_cast('i2', [('f1', 'i4')], casting='unsafe')) + # It should be the same for recursive structured or subarrays. + assert_(not np.can_cast('i2', [('f1', 'i4,i4')])) + assert_(np.can_cast('i2', [('f1', 'i4,i4')], casting='unsafe')) + assert_(not np.can_cast('i2', [('f1', '(2,3)i4')])) + assert_(np.can_cast('i2', [('f1', '(2,3)i4')], casting='unsafe')) + + def test_can_cast_structured_to_simple(self): + # Need unsafe casting for structured to simple. + assert_(not np.can_cast([('f1', 'i4')], 'i4')) + assert_(np.can_cast([('f1', 'i4')], 'i4', casting='unsafe')) + assert_(np.can_cast([('f1', 'i4')], 'i2', casting='unsafe')) + # Since it is unclear what is being cast, multiple fields to + # single should not work even for unsafe casting. + assert_(not np.can_cast('i4,i4', 'i4', casting='unsafe')) + # But a single field inside a single field is OK. + assert_(not np.can_cast([('f1', [('x', 'i4')])], 'i4')) + assert_(np.can_cast([('f1', [('x', 'i4')])], 'i4', casting='unsafe')) + # And a subarray is fine too - it will just take the first element + # (arguably not very consistently; might also take the first field). + assert_(not np.can_cast([('f0', '(3,)i4')], 'i4')) + assert_(np.can_cast([('f0', '(3,)i4')], 'i4', casting='unsafe')) + # But a structured subarray with multiple fields should fail. + assert_(not np.can_cast([('f0', ('i4,i4'), (2,))], 'i4', + casting='unsafe')) + + @pytest.mark.xfail(np._get_promotion_state() != "legacy", + reason="NEP 50: no python int/float/complex support (yet)") + def test_can_cast_values(self): + # gh-5917 + for dt in sctypes['int'] + sctypes['uint']: + ii = np.iinfo(dt) + assert_(np.can_cast(ii.min, dt)) + assert_(np.can_cast(ii.max, dt)) + assert_(not np.can_cast(ii.min - 1, dt)) + assert_(not np.can_cast(ii.max + 1, dt)) + + for dt in sctypes['float']: + fi = np.finfo(dt) + assert_(np.can_cast(fi.min, dt)) + assert_(np.can_cast(fi.max, dt)) + + @pytest.mark.parametrize("dtype", + list("?bhilqBHILQefdgFDG") + [rational]) + def test_can_cast_scalars(self, dtype): + # Basic test to ensure that scalars are supported in can-cast + # (does not check behavior exhaustively). + dtype = np.dtype(dtype) + scalar = dtype.type(0) + + assert np.can_cast(scalar, "int64") == np.can_cast(dtype, "int64") + assert np.can_cast(scalar, "float32", casting="unsafe") + + +# Custom exception class to test exception propagation in fromiter +class NIterError(Exception): + pass + + +class TestFromiter: + def makegen(self): + return (x**2 for x in range(24)) + + def test_types(self): + ai32 = np.fromiter(self.makegen(), np.int32) + ai64 = np.fromiter(self.makegen(), np.int64) + af = np.fromiter(self.makegen(), float) + assert_(ai32.dtype == np.dtype(np.int32)) + assert_(ai64.dtype == np.dtype(np.int64)) + assert_(af.dtype == np.dtype(float)) + + def test_lengths(self): + expected = np.array(list(self.makegen())) + a = np.fromiter(self.makegen(), int) + a20 = np.fromiter(self.makegen(), int, 20) + assert_(len(a) == len(expected)) + assert_(len(a20) == 20) + assert_raises(ValueError, np.fromiter, + self.makegen(), int, len(expected) + 10) + + def test_values(self): + expected = np.array(list(self.makegen())) + a = np.fromiter(self.makegen(), int) + a20 = np.fromiter(self.makegen(), int, 20) + assert_(np.all(a == expected, axis=0)) + assert_(np.all(a20 == expected[:20], axis=0)) + + def load_data(self, n, eindex): + # Utility method for the issue 2592 tests. + # Raise an exception at the desired index in the iterator. + for e in range(n): + if e == eindex: + raise NIterError('error at index %s' % eindex) + yield e + + @pytest.mark.parametrize("dtype", [int, object]) + @pytest.mark.parametrize(["count", "error_index"], [(10, 5), (10, 9)]) + def test_2592(self, count, error_index, dtype): + # Test iteration exceptions are correctly raised. The data/generator + # has `count` elements but errors at `error_index` + iterable = self.load_data(count, error_index) + with pytest.raises(NIterError): + np.fromiter(iterable, dtype=dtype, count=count) + + @pytest.mark.parametrize("dtype", ["S", "S0", "V0", "U0"]) + def test_empty_not_structured(self, dtype): + # Note, "S0" could be allowed at some point, so long "S" (without + # any length) is rejected. + with pytest.raises(ValueError, match="Must specify length"): + np.fromiter([], dtype=dtype) + + @pytest.mark.parametrize(["dtype", "data"], + [("d", [1, 2, 3, 4, 5, 6, 7, 8, 9]), + ("O", [1, 2, 3, 4, 5, 6, 7, 8, 9]), + ("i,O", [(1, 2), (5, 4), (2, 3), (9, 8), (6, 7)]), + # subarray dtypes (important because their dimensions end up + # in the result arrays dimension: + ("2i", [(1, 2), (5, 4), (2, 3), (9, 8), (6, 7)]), + (np.dtype(("O", (2, 3))), + [((1, 2, 3), (3, 4, 5)), ((3, 2, 1), (5, 4, 3))])]) + @pytest.mark.parametrize("length_hint", [0, 1]) + def test_growth_and_complicated_dtypes(self, dtype, data, length_hint): + dtype = np.dtype(dtype) + + data = data * 100 # make sure we realloc a bit + + class MyIter: + # Class/example from gh-15789 + def __length_hint__(self): + # only required to be an estimate, this is legal + return length_hint # 0 or 1 + + def __iter__(self): + return iter(data) + + res = np.fromiter(MyIter(), dtype=dtype) + expected = np.array(data, dtype=dtype) + + assert_array_equal(res, expected) + + def test_empty_result(self): + class MyIter: + def __length_hint__(self): + return 10 + + def __iter__(self): + return iter([]) # actual iterator is empty. + + res = np.fromiter(MyIter(), dtype="d") + assert res.shape == (0,) + assert res.dtype == "d" + + def test_too_few_items(self): + msg = "iterator too short: Expected 10 but iterator had only 3 items." + with pytest.raises(ValueError, match=msg): + np.fromiter([1, 2, 3], count=10, dtype=int) + + def test_failed_itemsetting(self): + with pytest.raises(TypeError): + np.fromiter([1, None, 3], dtype=int) + + # The following manages to hit somewhat trickier code paths: + iterable = ((2, 3, 4) for i in range(5)) + with pytest.raises(ValueError): + np.fromiter(iterable, dtype=np.dtype((int, 2))) + +class TestNonzero: + def test_nonzero_trivial(self): + assert_equal(np.count_nonzero(np.array([])), 0) + assert_equal(np.count_nonzero(np.array([], dtype='?')), 0) + assert_equal(np.nonzero(np.array([])), ([],)) + + assert_equal(np.count_nonzero(np.array([0])), 0) + assert_equal(np.count_nonzero(np.array([0], dtype='?')), 0) + assert_equal(np.nonzero(np.array([0])), ([],)) + + assert_equal(np.count_nonzero(np.array([1])), 1) + assert_equal(np.count_nonzero(np.array([1], dtype='?')), 1) + assert_equal(np.nonzero(np.array([1])), ([0],)) + + def test_nonzero_zerod(self): + assert_equal(np.count_nonzero(np.array(0)), 0) + assert_equal(np.count_nonzero(np.array(0, dtype='?')), 0) + with assert_warns(DeprecationWarning): + assert_equal(np.nonzero(np.array(0)), ([],)) + + assert_equal(np.count_nonzero(np.array(1)), 1) + assert_equal(np.count_nonzero(np.array(1, dtype='?')), 1) + with assert_warns(DeprecationWarning): + assert_equal(np.nonzero(np.array(1)), ([0],)) + + def test_nonzero_onedim(self): + x = np.array([1, 0, 2, -1, 0, 0, 8]) + assert_equal(np.count_nonzero(x), 4) + assert_equal(np.count_nonzero(x), 4) + assert_equal(np.nonzero(x), ([0, 2, 3, 6],)) + + # x = np.array([(1, 2), (0, 0), (1, 1), (-1, 3), (0, 7)], + # dtype=[('a', 'i4'), ('b', 'i2')]) + x = np.array([(1, 2, -5, -3), (0, 0, 2, 7), (1, 1, 0, 1), (-1, 3, 1, 0), (0, 7, 0, 4)], + dtype=[('a', 'i4'), ('b', 'i2'), ('c', 'i1'), ('d', 'i8')]) + assert_equal(np.count_nonzero(x['a']), 3) + assert_equal(np.count_nonzero(x['b']), 4) + assert_equal(np.count_nonzero(x['c']), 3) + assert_equal(np.count_nonzero(x['d']), 4) + assert_equal(np.nonzero(x['a']), ([0, 2, 3],)) + assert_equal(np.nonzero(x['b']), ([0, 2, 3, 4],)) + + def test_nonzero_twodim(self): + x = np.array([[0, 1, 0], [2, 0, 3]]) + assert_equal(np.count_nonzero(x.astype('i1')), 3) + assert_equal(np.count_nonzero(x.astype('i2')), 3) + assert_equal(np.count_nonzero(x.astype('i4')), 3) + assert_equal(np.count_nonzero(x.astype('i8')), 3) + assert_equal(np.nonzero(x), ([0, 1, 1], [1, 0, 2])) + + x = np.eye(3) + assert_equal(np.count_nonzero(x.astype('i1')), 3) + assert_equal(np.count_nonzero(x.astype('i2')), 3) + assert_equal(np.count_nonzero(x.astype('i4')), 3) + assert_equal(np.count_nonzero(x.astype('i8')), 3) + assert_equal(np.nonzero(x), ([0, 1, 2], [0, 1, 2])) + + x = np.array([[(0, 1), (0, 0), (1, 11)], + [(1, 1), (1, 0), (0, 0)], + [(0, 0), (1, 5), (0, 1)]], dtype=[('a', 'f4'), ('b', 'u1')]) + assert_equal(np.count_nonzero(x['a']), 4) + assert_equal(np.count_nonzero(x['b']), 5) + assert_equal(np.nonzero(x['a']), ([0, 1, 1, 2], [2, 0, 1, 1])) + assert_equal(np.nonzero(x['b']), ([0, 0, 1, 2, 2], [0, 2, 0, 1, 2])) + + assert_(not x['a'].T.flags.aligned) + assert_equal(np.count_nonzero(x['a'].T), 4) + assert_equal(np.count_nonzero(x['b'].T), 5) + assert_equal(np.nonzero(x['a'].T), ([0, 1, 1, 2], [1, 1, 2, 0])) + assert_equal(np.nonzero(x['b'].T), ([0, 0, 1, 2, 2], [0, 1, 2, 0, 2])) + + def test_sparse(self): + # test special sparse condition boolean code path + for i in range(20): + c = np.zeros(200, dtype=bool) + c[i::20] = True + assert_equal(np.nonzero(c)[0], np.arange(i, 200 + i, 20)) + + c = np.zeros(400, dtype=bool) + c[10 + i:20 + i] = True + c[20 + i*2] = True + assert_equal(np.nonzero(c)[0], + np.concatenate((np.arange(10 + i, 20 + i), [20 + i*2]))) + + def test_return_type(self): + class C(np.ndarray): + pass + + for view in (C, np.ndarray): + for nd in range(1, 4): + shape = tuple(range(2, 2+nd)) + x = np.arange(np.prod(shape)).reshape(shape).view(view) + for nzx in (np.nonzero(x), x.nonzero()): + for nzx_i in nzx: + assert_(type(nzx_i) is np.ndarray) + assert_(nzx_i.flags.writeable) + + def test_count_nonzero_axis(self): + # Basic check of functionality + m = np.array([[0, 1, 7, 0, 0], [3, 0, 0, 2, 19]]) + + expected = np.array([1, 1, 1, 1, 1]) + assert_equal(np.count_nonzero(m, axis=0), expected) + + expected = np.array([2, 3]) + assert_equal(np.count_nonzero(m, axis=1), expected) + + assert_raises(ValueError, np.count_nonzero, m, axis=(1, 1)) + assert_raises(TypeError, np.count_nonzero, m, axis='foo') + assert_raises(AxisError, np.count_nonzero, m, axis=3) + assert_raises(TypeError, np.count_nonzero, + m, axis=np.array([[1], [2]])) + + def test_count_nonzero_axis_all_dtypes(self): + # More thorough test that the axis argument is respected + # for all dtypes and responds correctly when presented with + # either integer or tuple arguments for axis + msg = "Mismatch for dtype: %s" + + def assert_equal_w_dt(a, b, err_msg): + assert_equal(a.dtype, b.dtype, err_msg=err_msg) + assert_equal(a, b, err_msg=err_msg) + + for dt in np.typecodes['All']: + err_msg = msg % (np.dtype(dt).name,) + + if dt != 'V': + if dt != 'M': + m = np.zeros((3, 3), dtype=dt) + n = np.ones(1, dtype=dt) + + m[0, 0] = n[0] + m[1, 0] = n[0] + + else: # np.zeros doesn't work for np.datetime64 + m = np.array(['1970-01-01'] * 9) + m = m.reshape((3, 3)) + + m[0, 0] = '1970-01-12' + m[1, 0] = '1970-01-12' + m = m.astype(dt) + + expected = np.array([2, 0, 0], dtype=np.intp) + assert_equal_w_dt(np.count_nonzero(m, axis=0), + expected, err_msg=err_msg) + + expected = np.array([1, 1, 0], dtype=np.intp) + assert_equal_w_dt(np.count_nonzero(m, axis=1), + expected, err_msg=err_msg) + + expected = np.array(2) + assert_equal(np.count_nonzero(m, axis=(0, 1)), + expected, err_msg=err_msg) + assert_equal(np.count_nonzero(m, axis=None), + expected, err_msg=err_msg) + assert_equal(np.count_nonzero(m), + expected, err_msg=err_msg) + + if dt == 'V': + # There are no 'nonzero' objects for np.void, so the testing + # setup is slightly different for this dtype + m = np.array([np.void(1)] * 6).reshape((2, 3)) + + expected = np.array([0, 0, 0], dtype=np.intp) + assert_equal_w_dt(np.count_nonzero(m, axis=0), + expected, err_msg=err_msg) + + expected = np.array([0, 0], dtype=np.intp) + assert_equal_w_dt(np.count_nonzero(m, axis=1), + expected, err_msg=err_msg) + + expected = np.array(0) + assert_equal(np.count_nonzero(m, axis=(0, 1)), + expected, err_msg=err_msg) + assert_equal(np.count_nonzero(m, axis=None), + expected, err_msg=err_msg) + assert_equal(np.count_nonzero(m), + expected, err_msg=err_msg) + + def test_count_nonzero_axis_consistent(self): + # Check that the axis behaviour for valid axes in + # non-special cases is consistent (and therefore + # correct) by checking it against an integer array + # that is then casted to the generic object dtype + from itertools import combinations, permutations + + axis = (0, 1, 2, 3) + size = (5, 5, 5, 5) + msg = "Mismatch for axis: %s" + + rng = np.random.RandomState(1234) + m = rng.randint(-100, 100, size=size) + n = m.astype(object) + + for length in range(len(axis)): + for combo in combinations(axis, length): + for perm in permutations(combo): + assert_equal( + np.count_nonzero(m, axis=perm), + np.count_nonzero(n, axis=perm), + err_msg=msg % (perm,)) + + def test_countnonzero_axis_empty(self): + a = np.array([[0, 0, 1], [1, 0, 1]]) + assert_equal(np.count_nonzero(a, axis=()), a.astype(bool)) + + def test_countnonzero_keepdims(self): + a = np.array([[0, 0, 1, 0], + [0, 3, 5, 0], + [7, 9, 2, 0]]) + assert_equal(np.count_nonzero(a, axis=0, keepdims=True), + [[1, 2, 3, 0]]) + assert_equal(np.count_nonzero(a, axis=1, keepdims=True), + [[1], [2], [3]]) + assert_equal(np.count_nonzero(a, keepdims=True), + [[6]]) + + def test_array_method(self): + # Tests that the array method + # call to nonzero works + m = np.array([[1, 0, 0], [4, 0, 6]]) + tgt = [[0, 1, 1], [0, 0, 2]] + + assert_equal(m.nonzero(), tgt) + + def test_nonzero_invalid_object(self): + # gh-9295 + a = np.array([np.array([1, 2]), 3], dtype=object) + assert_raises(ValueError, np.nonzero, a) + + class BoolErrors: + def __bool__(self): + raise ValueError("Not allowed") + + assert_raises(ValueError, np.nonzero, np.array([BoolErrors()])) + + def test_nonzero_sideeffect_safety(self): + # gh-13631 + class FalseThenTrue: + _val = False + def __bool__(self): + try: + return self._val + finally: + self._val = True + + class TrueThenFalse: + _val = True + def __bool__(self): + try: + return self._val + finally: + self._val = False + + # result grows on the second pass + a = np.array([True, FalseThenTrue()]) + assert_raises(RuntimeError, np.nonzero, a) + + a = np.array([[True], [FalseThenTrue()]]) + assert_raises(RuntimeError, np.nonzero, a) + + # result shrinks on the second pass + a = np.array([False, TrueThenFalse()]) + assert_raises(RuntimeError, np.nonzero, a) + + a = np.array([[False], [TrueThenFalse()]]) + assert_raises(RuntimeError, np.nonzero, a) + + def test_nonzero_sideffects_structured_void(self): + # Checks that structured void does not mutate alignment flag of + # original array. + arr = np.zeros(5, dtype="i1,i8,i8") # `ones` may short-circuit + assert arr.flags.aligned # structs are considered "aligned" + assert not arr["f2"].flags.aligned + # make sure that nonzero/count_nonzero do not flip the flag: + np.nonzero(arr) + assert arr.flags.aligned + np.count_nonzero(arr) + assert arr.flags.aligned + + def test_nonzero_exception_safe(self): + # gh-13930 + + class ThrowsAfter: + def __init__(self, iters): + self.iters_left = iters + + def __bool__(self): + if self.iters_left == 0: + raise ValueError("called `iters` times") + + self.iters_left -= 1 + return True + + """ + Test that a ValueError is raised instead of a SystemError + + If the __bool__ function is called after the error state is set, + Python (cpython) will raise a SystemError. + """ + + # assert that an exception in first pass is handled correctly + a = np.array([ThrowsAfter(5)]*10) + assert_raises(ValueError, np.nonzero, a) + + # raise exception in second pass for 1-dimensional loop + a = np.array([ThrowsAfter(15)]*10) + assert_raises(ValueError, np.nonzero, a) + + # raise exception in second pass for n-dimensional loop + a = np.array([[ThrowsAfter(15)]]*10) + assert_raises(ValueError, np.nonzero, a) + + @pytest.mark.skipif(IS_WASM, reason="wasm doesn't have threads") + def test_structured_threadsafety(self): + # Nonzero (and some other functions) should be threadsafe for + # structured datatypes, see gh-15387. This test can behave randomly. + from concurrent.futures import ThreadPoolExecutor + + # Create a deeply nested dtype to make a failure more likely: + dt = np.dtype([("", "f8")]) + dt = np.dtype([("", dt)]) + dt = np.dtype([("", dt)] * 2) + # The array should be large enough to likely run into threading issues + arr = np.random.uniform(size=(5000, 4)).view(dt)[:, 0] + def func(arr): + arr.nonzero() + + tpe = ThreadPoolExecutor(max_workers=8) + futures = [tpe.submit(func, arr) for _ in range(10)] + for f in futures: + f.result() + + assert arr.dtype is dt + + +class TestIndex: + def test_boolean(self): + a = rand(3, 5, 8) + V = rand(5, 8) + g1 = randint(0, 5, size=15) + g2 = randint(0, 8, size=15) + V[g1, g2] = -V[g1, g2] + assert_((np.array([a[0][V > 0], a[1][V > 0], a[2][V > 0]]) == a[:, V > 0]).all()) + + def test_boolean_edgecase(self): + a = np.array([], dtype='int32') + b = np.array([], dtype='bool') + c = a[b] + assert_equal(c, []) + assert_equal(c.dtype, np.dtype('int32')) + + +class TestBinaryRepr: + def test_zero(self): + assert_equal(np.binary_repr(0), '0') + + def test_positive(self): + assert_equal(np.binary_repr(10), '1010') + assert_equal(np.binary_repr(12522), + '11000011101010') + assert_equal(np.binary_repr(10736848), + '101000111101010011010000') + + def test_negative(self): + assert_equal(np.binary_repr(-1), '-1') + assert_equal(np.binary_repr(-10), '-1010') + assert_equal(np.binary_repr(-12522), + '-11000011101010') + assert_equal(np.binary_repr(-10736848), + '-101000111101010011010000') + + def test_sufficient_width(self): + assert_equal(np.binary_repr(0, width=5), '00000') + assert_equal(np.binary_repr(10, width=7), '0001010') + assert_equal(np.binary_repr(-5, width=7), '1111011') + + def test_neg_width_boundaries(self): + # see gh-8670 + + # Ensure that the example in the issue does not + # break before proceeding to a more thorough test. + assert_equal(np.binary_repr(-128, width=8), '10000000') + + for width in range(1, 11): + num = -2**(width - 1) + exp = '1' + (width - 1) * '0' + assert_equal(np.binary_repr(num, width=width), exp) + + def test_large_neg_int64(self): + # See gh-14289. + assert_equal(np.binary_repr(np.int64(-2**62), width=64), + '11' + '0'*62) + + +class TestBaseRepr: + def test_base3(self): + assert_equal(np.base_repr(3**5, 3), '100000') + + def test_positive(self): + assert_equal(np.base_repr(12, 10), '12') + assert_equal(np.base_repr(12, 10, 4), '000012') + assert_equal(np.base_repr(12, 4), '30') + assert_equal(np.base_repr(3731624803700888, 36), '10QR0ROFCEW') + + def test_negative(self): + assert_equal(np.base_repr(-12, 10), '-12') + assert_equal(np.base_repr(-12, 10, 4), '-000012') + assert_equal(np.base_repr(-12, 4), '-30') + + def test_base_range(self): + with assert_raises(ValueError): + np.base_repr(1, 1) + with assert_raises(ValueError): + np.base_repr(1, 37) + + def test_minimal_signed_int(self): + assert_equal(np.base_repr(np.int8(-128)), '-10000000') + + +def _test_array_equal_parametrizations(): + """ + we pre-create arrays as we sometime want to pass the same instance + and sometime not. Passing the same instances may not mean the array are + equal, especially when containing None + """ + # those are 0-d arrays, it used to be a special case + # where (e0 == e0).all() would raise + e0 = np.array(0, dtype="int") + e1 = np.array(1, dtype="float") + # x,y, nan_equal, expected_result + yield (e0, e0.copy(), None, True) + yield (e0, e0.copy(), False, True) + yield (e0, e0.copy(), True, True) + + # + yield (e1, e1.copy(), None, True) + yield (e1, e1.copy(), False, True) + yield (e1, e1.copy(), True, True) + + # Non-nanable – those cannot hold nans + a12 = np.array([1, 2]) + a12b = a12.copy() + a123 = np.array([1, 2, 3]) + a13 = np.array([1, 3]) + a34 = np.array([3, 4]) + + aS1 = np.array(["a"], dtype="S1") + aS1b = aS1.copy() + aS1u4 = np.array([("a", 1)], dtype="S1,u4") + aS1u4b = aS1u4.copy() + + yield (a12, a12b, None, True) + yield (a12, a12, None, True) + yield (a12, a123, None, False) + yield (a12, a34, None, False) + yield (a12, a13, None, False) + yield (aS1, aS1b, None, True) + yield (aS1, aS1, None, True) + + # Non-float dtype - equal_nan should have no effect, + yield (a123, a123, None, True) + yield (a123, a123, False, True) + yield (a123, a123, True, True) + yield (a123, a123.copy(), None, True) + yield (a123, a123.copy(), False, True) + yield (a123, a123.copy(), True, True) + yield (a123.astype("float"), a123.astype("float"), None, True) + yield (a123.astype("float"), a123.astype("float"), False, True) + yield (a123.astype("float"), a123.astype("float"), True, True) + + # these can hold None + b1 = np.array([1, 2, np.nan]) + b2 = np.array([1, np.nan, 2]) + b3 = np.array([1, 2, np.inf]) + b4 = np.array(np.nan) + + # instances are the same + yield (b1, b1, None, False) + yield (b1, b1, False, False) + yield (b1, b1, True, True) + + # equal but not same instance + yield (b1, b1.copy(), None, False) + yield (b1, b1.copy(), False, False) + yield (b1, b1.copy(), True, True) + + # same once stripped of Nan + yield (b1, b2, None, False) + yield (b1, b2, False, False) + yield (b1, b2, True, False) + + # nan's not conflated with inf's + yield (b1, b3, None, False) + yield (b1, b3, False, False) + yield (b1, b3, True, False) + + # all Nan + yield (b4, b4, None, False) + yield (b4, b4, False, False) + yield (b4, b4, True, True) + yield (b4, b4.copy(), None, False) + yield (b4, b4.copy(), False, False) + yield (b4, b4.copy(), True, True) + + t1 = b1.astype("timedelta64") + t2 = b2.astype("timedelta64") + + # Timedeltas are particular + yield (t1, t1, None, False) + yield (t1, t1, False, False) + yield (t1, t1, True, True) + + yield (t1, t1.copy(), None, False) + yield (t1, t1.copy(), False, False) + yield (t1, t1.copy(), True, True) + + yield (t1, t2, None, False) + yield (t1, t2, False, False) + yield (t1, t2, True, False) + + # Multi-dimensional array + md1 = np.array([[0, 1], [np.nan, 1]]) + + yield (md1, md1, None, False) + yield (md1, md1, False, False) + yield (md1, md1, True, True) + yield (md1, md1.copy(), None, False) + yield (md1, md1.copy(), False, False) + yield (md1, md1.copy(), True, True) + # both complexes are nan+nan.j but the same instance + cplx1, cplx2 = [np.array([np.nan + np.nan * 1j])] * 2 + + # only real or img are nan. + cplx3, cplx4 = np.complex64(1, np.nan), np.complex64(np.nan, 1) + + # Complex values + yield (cplx1, cplx2, None, False) + yield (cplx1, cplx2, False, False) + yield (cplx1, cplx2, True, True) + + # Complex values, 1+nan, nan+1j + yield (cplx3, cplx4, None, False) + yield (cplx3, cplx4, False, False) + yield (cplx3, cplx4, True, True) + + +class TestArrayComparisons: + @pytest.mark.parametrize( + "bx,by,equal_nan,expected", _test_array_equal_parametrizations() + ) + def test_array_equal_equal_nan(self, bx, by, equal_nan, expected): + """ + This test array_equal for a few combinaison: + + - are the two inputs the same object or not (same object many not + be equal if contains NaNs) + - Whether we should consider or not, NaNs, being equal. + + """ + if equal_nan is None: + res = np.array_equal(bx, by) + else: + res = np.array_equal(bx, by, equal_nan=equal_nan) + assert_(res is expected) + assert_(type(res) is bool) + + def test_array_equal_different_scalar_types(self): + # https://github.com/numpy/numpy/issues/27271 + a = np.array("foo") + b = np.array(1) + assert not np.array_equal(a, b) + assert not np.array_equiv(a, b) + + def test_none_compares_elementwise(self): + a = np.array([None, 1, None], dtype=object) + assert_equal(a == None, [True, False, True]) + assert_equal(a != None, [False, True, False]) + + a = np.ones(3) + assert_equal(a == None, [False, False, False]) + assert_equal(a != None, [True, True, True]) + + def test_array_equiv(self): + res = np.array_equiv(np.array([1, 2]), np.array([1, 2])) + assert_(res) + assert_(type(res) is bool) + res = np.array_equiv(np.array([1, 2]), np.array([1, 2, 3])) + assert_(not res) + assert_(type(res) is bool) + res = np.array_equiv(np.array([1, 2]), np.array([3, 4])) + assert_(not res) + assert_(type(res) is bool) + res = np.array_equiv(np.array([1, 2]), np.array([1, 3])) + assert_(not res) + assert_(type(res) is bool) + + res = np.array_equiv(np.array([1, 1]), np.array([1])) + assert_(res) + assert_(type(res) is bool) + res = np.array_equiv(np.array([1, 1]), np.array([[1], [1]])) + assert_(res) + assert_(type(res) is bool) + res = np.array_equiv(np.array([1, 2]), np.array([2])) + assert_(not res) + assert_(type(res) is bool) + res = np.array_equiv(np.array([1, 2]), np.array([[1], [2]])) + assert_(not res) + assert_(type(res) is bool) + res = np.array_equiv(np.array([1, 2]), np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9]])) + assert_(not res) + assert_(type(res) is bool) + + @pytest.mark.parametrize("dtype", ["V0", "V3", "V10"]) + def test_compare_unstructured_voids(self, dtype): + zeros = np.zeros(3, dtype=dtype) + + assert_array_equal(zeros, zeros) + assert not (zeros != zeros).any() + + if dtype == "V0": + # Can't test != of actually different data + return + + nonzeros = np.array([b"1", b"2", b"3"], dtype=dtype) + + assert not (zeros == nonzeros).any() + assert (zeros != nonzeros).all() + + +def assert_array_strict_equal(x, y): + assert_array_equal(x, y) + # Check flags, 32 bit arches typically don't provide 16 byte alignment + if ((x.dtype.alignment <= 8 or + np.intp().dtype.itemsize != 4) and + sys.platform != 'win32'): + assert_(x.flags == y.flags) + else: + assert_(x.flags.owndata == y.flags.owndata) + assert_(x.flags.writeable == y.flags.writeable) + assert_(x.flags.c_contiguous == y.flags.c_contiguous) + assert_(x.flags.f_contiguous == y.flags.f_contiguous) + assert_(x.flags.writebackifcopy == y.flags.writebackifcopy) + # check endianness + assert_(x.dtype.isnative == y.dtype.isnative) + + +class TestClip: + def setup_method(self): + self.nr = 5 + self.nc = 3 + + def fastclip(self, a, m, M, out=None, **kwargs): + return a.clip(m, M, out=out, **kwargs) + + def clip(self, a, m, M, out=None): + # use a.choose to verify fastclip result + selector = np.less(a, m) + 2*np.greater(a, M) + return selector.choose((a, m, M), out=out) + + # Handy functions + def _generate_data(self, n, m): + return randn(n, m) + + def _generate_data_complex(self, n, m): + return randn(n, m) + 1.j * rand(n, m) + + def _generate_flt_data(self, n, m): + return (randn(n, m)).astype(np.float32) + + def _neg_byteorder(self, a): + a = np.asarray(a) + if sys.byteorder == 'little': + a = a.astype(a.dtype.newbyteorder('>')) + else: + a = a.astype(a.dtype.newbyteorder('<')) + return a + + def _generate_non_native_data(self, n, m): + data = randn(n, m) + data = self._neg_byteorder(data) + assert_(not data.dtype.isnative) + return data + + def _generate_int_data(self, n, m): + return (10 * rand(n, m)).astype(np.int64) + + def _generate_int32_data(self, n, m): + return (10 * rand(n, m)).astype(np.int32) + + # Now the real test cases + + @pytest.mark.parametrize("dtype", '?bhilqpBHILQPefdgFDGO') + def test_ones_pathological(self, dtype): + # for preservation of behavior described in + # gh-12519; amin > amax behavior may still change + # in the future + arr = np.ones(10, dtype=dtype) + expected = np.zeros(10, dtype=dtype) + actual = np.clip(arr, 1, 0) + if dtype == 'O': + assert actual.tolist() == expected.tolist() + else: + assert_equal(actual, expected) + + def test_simple_double(self): + # Test native double input with scalar min/max. + a = self._generate_data(self.nr, self.nc) + m = 0.1 + M = 0.6 + ac = self.fastclip(a, m, M) + act = self.clip(a, m, M) + assert_array_strict_equal(ac, act) + + def test_simple_int(self): + # Test native int input with scalar min/max. + a = self._generate_int_data(self.nr, self.nc) + a = a.astype(int) + m = -2 + M = 4 + ac = self.fastclip(a, m, M) + act = self.clip(a, m, M) + assert_array_strict_equal(ac, act) + + def test_array_double(self): + # Test native double input with array min/max. + a = self._generate_data(self.nr, self.nc) + m = np.zeros(a.shape) + M = m + 0.5 + ac = self.fastclip(a, m, M) + act = self.clip(a, m, M) + assert_array_strict_equal(ac, act) + + def test_simple_nonnative(self): + # Test non native double input with scalar min/max. + # Test native double input with non native double scalar min/max. + a = self._generate_non_native_data(self.nr, self.nc) + m = -0.5 + M = 0.6 + ac = self.fastclip(a, m, M) + act = self.clip(a, m, M) + assert_array_equal(ac, act) + + # Test native double input with non native double scalar min/max. + a = self._generate_data(self.nr, self.nc) + m = -0.5 + M = self._neg_byteorder(0.6) + assert_(not M.dtype.isnative) + ac = self.fastclip(a, m, M) + act = self.clip(a, m, M) + assert_array_equal(ac, act) + + def test_simple_complex(self): + # Test native complex input with native double scalar min/max. + # Test native input with complex double scalar min/max. + a = 3 * self._generate_data_complex(self.nr, self.nc) + m = -0.5 + M = 1. + ac = self.fastclip(a, m, M) + act = self.clip(a, m, M) + assert_array_strict_equal(ac, act) + + # Test native input with complex double scalar min/max. + a = 3 * self._generate_data(self.nr, self.nc) + m = -0.5 + 1.j + M = 1. + 2.j + ac = self.fastclip(a, m, M) + act = self.clip(a, m, M) + assert_array_strict_equal(ac, act) + + def test_clip_complex(self): + # Address Issue gh-5354 for clipping complex arrays + # Test native complex input without explicit min/max + # ie, either min=None or max=None + a = np.ones(10, dtype=complex) + m = a.min() + M = a.max() + am = self.fastclip(a, m, None) + aM = self.fastclip(a, None, M) + assert_array_strict_equal(am, a) + assert_array_strict_equal(aM, a) + + def test_clip_non_contig(self): + # Test clip for non contiguous native input and native scalar min/max. + a = self._generate_data(self.nr * 2, self.nc * 3) + a = a[::2, ::3] + assert_(not a.flags['F_CONTIGUOUS']) + assert_(not a.flags['C_CONTIGUOUS']) + ac = self.fastclip(a, -1.6, 1.7) + act = self.clip(a, -1.6, 1.7) + assert_array_strict_equal(ac, act) + + def test_simple_out(self): + # Test native double input with scalar min/max. + a = self._generate_data(self.nr, self.nc) + m = -0.5 + M = 0.6 + ac = np.zeros(a.shape) + act = np.zeros(a.shape) + self.fastclip(a, m, M, ac) + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + @pytest.mark.parametrize("casting", [None, "unsafe"]) + def test_simple_int32_inout(self, casting): + # Test native int32 input with double min/max and int32 out. + a = self._generate_int32_data(self.nr, self.nc) + m = np.float64(0) + M = np.float64(2) + ac = np.zeros(a.shape, dtype=np.int32) + act = ac.copy() + if casting is None: + with pytest.raises(TypeError): + self.fastclip(a, m, M, ac, casting=casting) + else: + # explicitly passing "unsafe" will silence warning + self.fastclip(a, m, M, ac, casting=casting) + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + def test_simple_int64_out(self): + # Test native int32 input with int32 scalar min/max and int64 out. + a = self._generate_int32_data(self.nr, self.nc) + m = np.int32(-1) + M = np.int32(1) + ac = np.zeros(a.shape, dtype=np.int64) + act = ac.copy() + self.fastclip(a, m, M, ac) + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + def test_simple_int64_inout(self): + # Test native int32 input with double array min/max and int32 out. + a = self._generate_int32_data(self.nr, self.nc) + m = np.zeros(a.shape, np.float64) + M = np.float64(1) + ac = np.zeros(a.shape, dtype=np.int32) + act = ac.copy() + self.fastclip(a, m, M, out=ac, casting="unsafe") + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + def test_simple_int32_out(self): + # Test native double input with scalar min/max and int out. + a = self._generate_data(self.nr, self.nc) + m = -1.0 + M = 2.0 + ac = np.zeros(a.shape, dtype=np.int32) + act = ac.copy() + self.fastclip(a, m, M, out=ac, casting="unsafe") + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + def test_simple_inplace_01(self): + # Test native double input with array min/max in-place. + a = self._generate_data(self.nr, self.nc) + ac = a.copy() + m = np.zeros(a.shape) + M = 1.0 + self.fastclip(a, m, M, a) + self.clip(a, m, M, ac) + assert_array_strict_equal(a, ac) + + def test_simple_inplace_02(self): + # Test native double input with scalar min/max in-place. + a = self._generate_data(self.nr, self.nc) + ac = a.copy() + m = -0.5 + M = 0.6 + self.fastclip(a, m, M, a) + self.clip(ac, m, M, ac) + assert_array_strict_equal(a, ac) + + def test_noncontig_inplace(self): + # Test non contiguous double input with double scalar min/max in-place. + a = self._generate_data(self.nr * 2, self.nc * 3) + a = a[::2, ::3] + assert_(not a.flags['F_CONTIGUOUS']) + assert_(not a.flags['C_CONTIGUOUS']) + ac = a.copy() + m = -0.5 + M = 0.6 + self.fastclip(a, m, M, a) + self.clip(ac, m, M, ac) + assert_array_equal(a, ac) + + def test_type_cast_01(self): + # Test native double input with scalar min/max. + a = self._generate_data(self.nr, self.nc) + m = -0.5 + M = 0.6 + ac = self.fastclip(a, m, M) + act = self.clip(a, m, M) + assert_array_strict_equal(ac, act) + + def test_type_cast_02(self): + # Test native int32 input with int32 scalar min/max. + a = self._generate_int_data(self.nr, self.nc) + a = a.astype(np.int32) + m = -2 + M = 4 + ac = self.fastclip(a, m, M) + act = self.clip(a, m, M) + assert_array_strict_equal(ac, act) + + def test_type_cast_03(self): + # Test native int32 input with float64 scalar min/max. + a = self._generate_int32_data(self.nr, self.nc) + m = -2 + M = 4 + ac = self.fastclip(a, np.float64(m), np.float64(M)) + act = self.clip(a, np.float64(m), np.float64(M)) + assert_array_strict_equal(ac, act) + + def test_type_cast_04(self): + # Test native int32 input with float32 scalar min/max. + a = self._generate_int32_data(self.nr, self.nc) + m = np.float32(-2) + M = np.float32(4) + act = self.fastclip(a, m, M) + ac = self.clip(a, m, M) + assert_array_strict_equal(ac, act) + + def test_type_cast_05(self): + # Test native int32 with double arrays min/max. + a = self._generate_int_data(self.nr, self.nc) + m = -0.5 + M = 1. + ac = self.fastclip(a, m * np.zeros(a.shape), M) + act = self.clip(a, m * np.zeros(a.shape), M) + assert_array_strict_equal(ac, act) + + def test_type_cast_06(self): + # Test native with NON native scalar min/max. + a = self._generate_data(self.nr, self.nc) + m = 0.5 + m_s = self._neg_byteorder(m) + M = 1. + act = self.clip(a, m_s, M) + ac = self.fastclip(a, m_s, M) + assert_array_strict_equal(ac, act) + + def test_type_cast_07(self): + # Test NON native with native array min/max. + a = self._generate_data(self.nr, self.nc) + m = -0.5 * np.ones(a.shape) + M = 1. + a_s = self._neg_byteorder(a) + assert_(not a_s.dtype.isnative) + act = a_s.clip(m, M) + ac = self.fastclip(a_s, m, M) + assert_array_strict_equal(ac, act) + + def test_type_cast_08(self): + # Test NON native with native scalar min/max. + a = self._generate_data(self.nr, self.nc) + m = -0.5 + M = 1. + a_s = self._neg_byteorder(a) + assert_(not a_s.dtype.isnative) + ac = self.fastclip(a_s, m, M) + act = a_s.clip(m, M) + assert_array_strict_equal(ac, act) + + def test_type_cast_09(self): + # Test native with NON native array min/max. + a = self._generate_data(self.nr, self.nc) + m = -0.5 * np.ones(a.shape) + M = 1. + m_s = self._neg_byteorder(m) + assert_(not m_s.dtype.isnative) + ac = self.fastclip(a, m_s, M) + act = self.clip(a, m_s, M) + assert_array_strict_equal(ac, act) + + def test_type_cast_10(self): + # Test native int32 with float min/max and float out for output argument. + a = self._generate_int_data(self.nr, self.nc) + b = np.zeros(a.shape, dtype=np.float32) + m = np.float32(-0.5) + M = np.float32(1) + act = self.clip(a, m, M, out=b) + ac = self.fastclip(a, m, M, out=b) + assert_array_strict_equal(ac, act) + + def test_type_cast_11(self): + # Test non native with native scalar, min/max, out non native + a = self._generate_non_native_data(self.nr, self.nc) + b = a.copy() + b = b.astype(b.dtype.newbyteorder('>')) + bt = b.copy() + m = -0.5 + M = 1. + self.fastclip(a, m, M, out=b) + self.clip(a, m, M, out=bt) + assert_array_strict_equal(b, bt) + + def test_type_cast_12(self): + # Test native int32 input and min/max and float out + a = self._generate_int_data(self.nr, self.nc) + b = np.zeros(a.shape, dtype=np.float32) + m = np.int32(0) + M = np.int32(1) + act = self.clip(a, m, M, out=b) + ac = self.fastclip(a, m, M, out=b) + assert_array_strict_equal(ac, act) + + def test_clip_with_out_simple(self): + # Test native double input with scalar min/max + a = self._generate_data(self.nr, self.nc) + m = -0.5 + M = 0.6 + ac = np.zeros(a.shape) + act = np.zeros(a.shape) + self.fastclip(a, m, M, ac) + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + def test_clip_with_out_simple2(self): + # Test native int32 input with double min/max and int32 out + a = self._generate_int32_data(self.nr, self.nc) + m = np.float64(0) + M = np.float64(2) + ac = np.zeros(a.shape, dtype=np.int32) + act = ac.copy() + self.fastclip(a, m, M, out=ac, casting="unsafe") + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + def test_clip_with_out_simple_int32(self): + # Test native int32 input with int32 scalar min/max and int64 out + a = self._generate_int32_data(self.nr, self.nc) + m = np.int32(-1) + M = np.int32(1) + ac = np.zeros(a.shape, dtype=np.int64) + act = ac.copy() + self.fastclip(a, m, M, ac) + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + def test_clip_with_out_array_int32(self): + # Test native int32 input with double array min/max and int32 out + a = self._generate_int32_data(self.nr, self.nc) + m = np.zeros(a.shape, np.float64) + M = np.float64(1) + ac = np.zeros(a.shape, dtype=np.int32) + act = ac.copy() + self.fastclip(a, m, M, out=ac, casting="unsafe") + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + def test_clip_with_out_array_outint32(self): + # Test native double input with scalar min/max and int out + a = self._generate_data(self.nr, self.nc) + m = -1.0 + M = 2.0 + ac = np.zeros(a.shape, dtype=np.int32) + act = ac.copy() + self.fastclip(a, m, M, out=ac, casting="unsafe") + self.clip(a, m, M, act) + assert_array_strict_equal(ac, act) + + def test_clip_with_out_transposed(self): + # Test that the out argument works when transposed + a = np.arange(16).reshape(4, 4) + out = np.empty_like(a).T + a.clip(4, 10, out=out) + expected = self.clip(a, 4, 10) + assert_array_equal(out, expected) + + def test_clip_with_out_memory_overlap(self): + # Test that the out argument works when it has memory overlap + a = np.arange(16).reshape(4, 4) + ac = a.copy() + a[:-1].clip(4, 10, out=a[1:]) + expected = self.clip(ac[:-1], 4, 10) + assert_array_equal(a[1:], expected) + + def test_clip_inplace_array(self): + # Test native double input with array min/max + a = self._generate_data(self.nr, self.nc) + ac = a.copy() + m = np.zeros(a.shape) + M = 1.0 + self.fastclip(a, m, M, a) + self.clip(a, m, M, ac) + assert_array_strict_equal(a, ac) + + def test_clip_inplace_simple(self): + # Test native double input with scalar min/max + a = self._generate_data(self.nr, self.nc) + ac = a.copy() + m = -0.5 + M = 0.6 + self.fastclip(a, m, M, a) + self.clip(a, m, M, ac) + assert_array_strict_equal(a, ac) + + def test_clip_func_takes_out(self): + # Ensure that the clip() function takes an out=argument. + a = self._generate_data(self.nr, self.nc) + ac = a.copy() + m = -0.5 + M = 0.6 + a2 = np.clip(a, m, M, out=a) + self.clip(a, m, M, ac) + assert_array_strict_equal(a2, ac) + assert_(a2 is a) + + def test_clip_nan(self): + d = np.arange(7.) + assert_equal(d.clip(min=np.nan), np.nan) + assert_equal(d.clip(max=np.nan), np.nan) + assert_equal(d.clip(min=np.nan, max=np.nan), np.nan) + assert_equal(d.clip(min=-2, max=np.nan), np.nan) + assert_equal(d.clip(min=np.nan, max=10), np.nan) + + def test_object_clip(self): + a = np.arange(10, dtype=object) + actual = np.clip(a, 1, 5) + expected = np.array([1, 1, 2, 3, 4, 5, 5, 5, 5, 5]) + assert actual.tolist() == expected.tolist() + + def test_clip_all_none(self): + a = np.arange(10, dtype=object) + with assert_raises_regex(ValueError, 'max or min'): + np.clip(a, None, None) + + def test_clip_invalid_casting(self): + a = np.arange(10, dtype=object) + with assert_raises_regex(ValueError, + 'casting must be one of'): + self.fastclip(a, 1, 8, casting="garbage") + + @pytest.mark.parametrize("amin, amax", [ + # two scalars + (1, 0), + # mix scalar and array + (1, np.zeros(10)), + # two arrays + (np.ones(10), np.zeros(10)), + ]) + def test_clip_value_min_max_flip(self, amin, amax): + a = np.arange(10, dtype=np.int64) + # requirement from ufunc_docstrings.py + expected = np.minimum(np.maximum(a, amin), amax) + actual = np.clip(a, amin, amax) + assert_equal(actual, expected) + + @pytest.mark.parametrize("arr, amin, amax, exp", [ + # for a bug in npy_ObjectClip, based on a + # case produced by hypothesis + (np.zeros(10, dtype=object), + 0, + -2**64+1, + np.full(10, -2**64+1, dtype=object)), + # for bugs in NPY_TIMEDELTA_MAX, based on a case + # produced by hypothesis + (np.zeros(10, dtype='m8') - 1, + 0, + 0, + np.zeros(10, dtype='m8')), + ]) + def test_clip_problem_cases(self, arr, amin, amax, exp): + actual = np.clip(arr, amin, amax) + assert_equal(actual, exp) + + @pytest.mark.parametrize("arr, amin, amax", [ + # problematic scalar nan case from hypothesis + (np.zeros(10, dtype=np.int64), + np.array(np.nan), + np.zeros(10, dtype=np.int32)), + ]) + def test_clip_scalar_nan_propagation(self, arr, amin, amax): + # enforcement of scalar nan propagation for comparisons + # called through clip() + expected = np.minimum(np.maximum(arr, amin), amax) + actual = np.clip(arr, amin, amax) + assert_equal(actual, expected) + + @pytest.mark.xfail(reason="propagation doesn't match spec") + @pytest.mark.parametrize("arr, amin, amax", [ + (np.array([1] * 10, dtype='m8'), + np.timedelta64('NaT'), + np.zeros(10, dtype=np.int32)), + ]) + @pytest.mark.filterwarnings("ignore::DeprecationWarning") + def test_NaT_propagation(self, arr, amin, amax): + # NOTE: the expected function spec doesn't + # propagate NaT, but clip() now does + expected = np.minimum(np.maximum(arr, amin), amax) + actual = np.clip(arr, amin, amax) + assert_equal(actual, expected) + + @given( + data=st.data(), + arr=hynp.arrays( + dtype=hynp.integer_dtypes() | hynp.floating_dtypes(), + shape=hynp.array_shapes() + ) + ) + def test_clip_property(self, data, arr): + """A property-based test using Hypothesis. + + This aims for maximum generality: it could in principle generate *any* + valid inputs to np.clip, and in practice generates much more varied + inputs than human testers come up with. + + Because many of the inputs have tricky dependencies - compatible dtypes + and mutually-broadcastable shapes - we use `st.data()` strategy draw + values *inside* the test function, from strategies we construct based + on previous values. An alternative would be to define a custom strategy + with `@st.composite`, but until we have duplicated code inline is fine. + + That accounts for most of the function; the actual test is just three + lines to calculate and compare actual vs expected results! + """ + numeric_dtypes = hynp.integer_dtypes() | hynp.floating_dtypes() + # Generate shapes for the bounds which can be broadcast with each other + # and with the base shape. Below, we might decide to use scalar bounds, + # but it's clearer to generate these shapes unconditionally in advance. + in_shapes, result_shape = data.draw( + hynp.mutually_broadcastable_shapes( + num_shapes=2, base_shape=arr.shape + ) + ) + # Scalar `nan` is deprecated due to the differing behaviour it shows. + s = numeric_dtypes.flatmap( + lambda x: hynp.from_dtype(x, allow_nan=False)) + amin = data.draw(s | hynp.arrays(dtype=numeric_dtypes, + shape=in_shapes[0], elements={"allow_nan": False})) + amax = data.draw(s | hynp.arrays(dtype=numeric_dtypes, + shape=in_shapes[1], elements={"allow_nan": False})) + + # Then calculate our result and expected result and check that they're + # equal! See gh-12519 and gh-19457 for discussion deciding on this + # property and the result_type argument. + result = np.clip(arr, amin, amax) + t = np.result_type(arr, amin, amax) + expected = np.minimum(amax, np.maximum(arr, amin, dtype=t), dtype=t) + assert result.dtype == t + assert_array_equal(result, expected) + + +class TestAllclose: + rtol = 1e-5 + atol = 1e-8 + + def setup_method(self): + self.olderr = np.seterr(invalid='ignore') + + def teardown_method(self): + np.seterr(**self.olderr) + + def tst_allclose(self, x, y): + assert_(np.allclose(x, y), "%s and %s not close" % (x, y)) + + def tst_not_allclose(self, x, y): + assert_(not np.allclose(x, y), "%s and %s shouldn't be close" % (x, y)) + + def test_ip_allclose(self): + # Parametric test factory. + arr = np.array([100, 1000]) + aran = np.arange(125).reshape((5, 5, 5)) + + atol = self.atol + rtol = self.rtol + + data = [([1, 0], [1, 0]), + ([atol], [0]), + ([1], [1+rtol+atol]), + (arr, arr + arr*rtol), + (arr, arr + arr*rtol + atol*2), + (aran, aran + aran*rtol), + (np.inf, np.inf), + (np.inf, [np.inf])] + + for (x, y) in data: + self.tst_allclose(x, y) + + def test_ip_not_allclose(self): + # Parametric test factory. + aran = np.arange(125).reshape((5, 5, 5)) + + atol = self.atol + rtol = self.rtol + + data = [([np.inf, 0], [1, np.inf]), + ([np.inf, 0], [1, 0]), + ([np.inf, np.inf], [1, np.inf]), + ([np.inf, np.inf], [1, 0]), + ([-np.inf, 0], [np.inf, 0]), + ([np.nan, 0], [np.nan, 0]), + ([atol*2], [0]), + ([1], [1+rtol+atol*2]), + (aran, aran + aran*atol + atol*2), + (np.array([np.inf, 1]), np.array([0, np.inf]))] + + for (x, y) in data: + self.tst_not_allclose(x, y) + + def test_no_parameter_modification(self): + x = np.array([np.inf, 1]) + y = np.array([0, np.inf]) + np.allclose(x, y) + assert_array_equal(x, np.array([np.inf, 1])) + assert_array_equal(y, np.array([0, np.inf])) + + def test_min_int(self): + # Could make problems because of abs(min_int) == min_int + min_int = np.iinfo(np.int_).min + a = np.array([min_int], dtype=np.int_) + assert_(np.allclose(a, a)) + + def test_equalnan(self): + x = np.array([1.0, np.nan]) + assert_(np.allclose(x, x, equal_nan=True)) + + def test_return_class_is_ndarray(self): + # Issue gh-6475 + # Check that allclose does not preserve subtypes + class Foo(np.ndarray): + def __new__(cls, *args, **kwargs): + return np.array(*args, **kwargs).view(cls) + + a = Foo([1]) + assert_(type(np.allclose(a, a)) is bool) + + +class TestIsclose: + rtol = 1e-5 + atol = 1e-8 + + def _setup(self): + atol = self.atol + rtol = self.rtol + arr = np.array([100, 1000]) + aran = np.arange(125).reshape((5, 5, 5)) + + self.all_close_tests = [ + ([1, 0], [1, 0]), + ([atol], [0]), + ([1], [1 + rtol + atol]), + (arr, arr + arr*rtol), + (arr, arr + arr*rtol + atol), + (aran, aran + aran*rtol), + (np.inf, np.inf), + (np.inf, [np.inf]), + ([np.inf, -np.inf], [np.inf, -np.inf]), + ] + self.none_close_tests = [ + ([np.inf, 0], [1, np.inf]), + ([np.inf, -np.inf], [1, 0]), + ([np.inf, np.inf], [1, -np.inf]), + ([np.inf, np.inf], [1, 0]), + ([np.nan, 0], [np.nan, -np.inf]), + ([atol*2], [0]), + ([1], [1 + rtol + atol*2]), + (aran, aran + rtol*1.1*aran + atol*1.1), + (np.array([np.inf, 1]), np.array([0, np.inf])), + ] + self.some_close_tests = [ + ([np.inf, 0], [np.inf, atol*2]), + ([atol, 1, 1e6*(1 + 2*rtol) + atol], [0, np.nan, 1e6]), + (np.arange(3), [0, 1, 2.1]), + (np.nan, [np.nan, np.nan, np.nan]), + ([0], [atol, np.inf, -np.inf, np.nan]), + (0, [atol, np.inf, -np.inf, np.nan]), + ] + self.some_close_results = [ + [True, False], + [True, False, False], + [True, True, False], + [False, False, False], + [True, False, False, False], + [True, False, False, False], + ] + + def test_ip_isclose(self): + self._setup() + tests = self.some_close_tests + results = self.some_close_results + for (x, y), result in zip(tests, results): + assert_array_equal(np.isclose(x, y), result) + + x = np.array([2.1, 2.1, 2.1, 2.1, 5, np.nan]) + y = np.array([2, 2, 2, 2, np.nan, 5]) + atol = [0.11, 0.09, 1e-8, 1e-8, 1, 1] + rtol = [1e-8, 1e-8, 0.06, 0.04, 1, 1] + expected = np.array([True, False, True, False, False, False]) + assert_array_equal(np.isclose(x, y, rtol=rtol, atol=atol), expected) + + message = "operands could not be broadcast together..." + atol = np.array([1e-8, 1e-8]) + with assert_raises(ValueError, msg=message): + np.isclose(x, y, atol=atol) + + rtol = np.array([1e-5, 1e-5]) + with assert_raises(ValueError, msg=message): + np.isclose(x, y, rtol=rtol) + + def test_nep50_isclose(self): + below_one = float(1.-np.finfo('f8').eps) + f32 = np.array(below_one, 'f4') # This is just 1 at float32 precision + assert f32 > np.array(below_one) + # NEP 50 broadcasting of python scalars + assert f32 == below_one + # Test that it works for isclose arguments too (and that those fail if + # one uses a numpy float64). + assert np.isclose(f32, below_one, atol=0, rtol=0) + assert np.isclose(f32, np.float32(0), atol=below_one) + assert np.isclose(f32, 2, atol=0, rtol=below_one/2) + assert not np.isclose(f32, np.float64(below_one), atol=0, rtol=0) + assert not np.isclose(f32, np.float32(0), atol=np.float64(below_one)) + assert not np.isclose(f32, 2, atol=0, rtol=np.float64(below_one/2)) + + def tst_all_isclose(self, x, y): + assert_(np.all(np.isclose(x, y)), "%s and %s not close" % (x, y)) + + def tst_none_isclose(self, x, y): + msg = "%s and %s shouldn't be close" + assert_(not np.any(np.isclose(x, y)), msg % (x, y)) + + def tst_isclose_allclose(self, x, y): + msg = "isclose.all() and allclose aren't same for %s and %s" + msg2 = "isclose and allclose aren't same for %s and %s" + if np.isscalar(x) and np.isscalar(y): + assert_(np.isclose(x, y) == np.allclose(x, y), msg=msg2 % (x, y)) + else: + assert_array_equal(np.isclose(x, y).all(), np.allclose(x, y), msg % (x, y)) + + def test_ip_all_isclose(self): + self._setup() + for (x, y) in self.all_close_tests: + self.tst_all_isclose(x, y) + + x = np.array([2.3, 3.6, 4.4, np.nan]) + y = np.array([2, 3, 4, np.nan]) + atol = [0.31, 0, 0, 1] + rtol = [0, 0.21, 0.11, 1] + assert np.allclose(x, y, atol=atol, rtol=rtol, equal_nan=True) + assert not np.allclose(x, y, atol=0.1, rtol=0.1, equal_nan=True) + + # Show that gh-14330 is resolved + assert np.allclose([1, 2, float('nan')], [1, 2, float('nan')], + atol=[1, 1, 1], equal_nan=True) + + def test_ip_none_isclose(self): + self._setup() + for (x, y) in self.none_close_tests: + self.tst_none_isclose(x, y) + + def test_ip_isclose_allclose(self): + self._setup() + tests = (self.all_close_tests + self.none_close_tests + + self.some_close_tests) + for (x, y) in tests: + self.tst_isclose_allclose(x, y) + + def test_equal_nan(self): + assert_array_equal(np.isclose(np.nan, np.nan, equal_nan=True), [True]) + arr = np.array([1.0, np.nan]) + assert_array_equal(np.isclose(arr, arr, equal_nan=True), [True, True]) + + def test_masked_arrays(self): + # Make sure to test the output type when arguments are interchanged. + + x = np.ma.masked_where([True, True, False], np.arange(3)) + assert_(type(x) is type(np.isclose(2, x))) + assert_(type(x) is type(np.isclose(x, 2))) + + x = np.ma.masked_where([True, True, False], [np.nan, np.inf, np.nan]) + assert_(type(x) is type(np.isclose(np.inf, x))) + assert_(type(x) is type(np.isclose(x, np.inf))) + + x = np.ma.masked_where([True, True, False], [np.nan, np.nan, np.nan]) + y = np.isclose(np.nan, x, equal_nan=True) + assert_(type(x) is type(y)) + # Ensure that the mask isn't modified... + assert_array_equal([True, True, False], y.mask) + y = np.isclose(x, np.nan, equal_nan=True) + assert_(type(x) is type(y)) + # Ensure that the mask isn't modified... + assert_array_equal([True, True, False], y.mask) + + x = np.ma.masked_where([True, True, False], [np.nan, np.nan, np.nan]) + y = np.isclose(x, x, equal_nan=True) + assert_(type(x) is type(y)) + # Ensure that the mask isn't modified... + assert_array_equal([True, True, False], y.mask) + + def test_scalar_return(self): + assert_(np.isscalar(np.isclose(1, 1))) + + def test_no_parameter_modification(self): + x = np.array([np.inf, 1]) + y = np.array([0, np.inf]) + np.isclose(x, y) + assert_array_equal(x, np.array([np.inf, 1])) + assert_array_equal(y, np.array([0, np.inf])) + + def test_non_finite_scalar(self): + # GH7014, when two scalars are compared the output should also be a + # scalar + assert_(np.isclose(np.inf, -np.inf) is np.False_) + assert_(np.isclose(0, np.inf) is np.False_) + assert_(type(np.isclose(0, np.inf)) is np.bool) + + def test_timedelta(self): + # Allclose currently works for timedelta64 as long as `atol` is + # an integer or also a timedelta64 + a = np.array([[1, 2, 3, "NaT"]], dtype="m8[ns]") + assert np.isclose(a, a, atol=0, equal_nan=True).all() + assert np.isclose(a, a, atol=np.timedelta64(1, "ns"), equal_nan=True).all() + assert np.allclose(a, a, atol=0, equal_nan=True) + assert np.allclose(a, a, atol=np.timedelta64(1, "ns"), equal_nan=True) + + +class TestStdVar: + def setup_method(self): + self.A = np.array([1, -1, 1, -1]) + self.real_var = 1 + + def test_basic(self): + assert_almost_equal(np.var(self.A), self.real_var) + assert_almost_equal(np.std(self.A)**2, self.real_var) + + def test_scalars(self): + assert_equal(np.var(1), 0) + assert_equal(np.std(1), 0) + + def test_ddof1(self): + assert_almost_equal(np.var(self.A, ddof=1), + self.real_var * len(self.A) / (len(self.A) - 1)) + assert_almost_equal(np.std(self.A, ddof=1)**2, + self.real_var*len(self.A) / (len(self.A) - 1)) + + def test_ddof2(self): + assert_almost_equal(np.var(self.A, ddof=2), + self.real_var * len(self.A) / (len(self.A) - 2)) + assert_almost_equal(np.std(self.A, ddof=2)**2, + self.real_var * len(self.A) / (len(self.A) - 2)) + + def test_correction(self): + assert_almost_equal( + np.var(self.A, correction=1), np.var(self.A, ddof=1) + ) + assert_almost_equal( + np.std(self.A, correction=1), np.std(self.A, ddof=1) + ) + + err_msg = "ddof and correction can't be provided simultaneously." + + with assert_raises_regex(ValueError, err_msg): + np.var(self.A, ddof=1, correction=0) + + with assert_raises_regex(ValueError, err_msg): + np.std(self.A, ddof=1, correction=1) + + def test_out_scalar(self): + d = np.arange(10) + out = np.array(0.) + r = np.std(d, out=out) + assert_(r is out) + assert_array_equal(r, out) + r = np.var(d, out=out) + assert_(r is out) + assert_array_equal(r, out) + r = np.mean(d, out=out) + assert_(r is out) + assert_array_equal(r, out) + + +class TestStdVarComplex: + def test_basic(self): + A = np.array([1, 1.j, -1, -1.j]) + real_var = 1 + assert_almost_equal(np.var(A), real_var) + assert_almost_equal(np.std(A)**2, real_var) + + def test_scalars(self): + assert_equal(np.var(1j), 0) + assert_equal(np.std(1j), 0) + + +class TestCreationFuncs: + # Test ones, zeros, empty and full. + + def setup_method(self): + dtypes = {np.dtype(tp) for tp in itertools.chain(*sctypes.values())} + # void, bytes, str + variable_sized = {tp for tp in dtypes if tp.str.endswith('0')} + keyfunc = lambda dtype: dtype.str + self.dtypes = sorted(dtypes - variable_sized | + {np.dtype(tp.str.replace("0", str(i))) + for tp in variable_sized for i in range(1, 10)}, + key=keyfunc) + self.dtypes += [type(dt) for dt in sorted(dtypes, key=keyfunc)] + self.orders = {'C': 'c_contiguous', 'F': 'f_contiguous'} + self.ndims = 10 + + def check_function(self, func, fill_value=None): + par = ((0, 1, 2), + range(self.ndims), + self.orders, + self.dtypes) + fill_kwarg = {} + if fill_value is not None: + fill_kwarg = {'fill_value': fill_value} + + for size, ndims, order, dtype in itertools.product(*par): + shape = ndims * [size] + + is_void = dtype is np.dtypes.VoidDType or ( + isinstance(dtype, np.dtype) and dtype.str.startswith('|V')) + + # do not fill void type + if fill_kwarg and is_void: + continue + + arr = func(shape, order=order, dtype=dtype, + **fill_kwarg) + + if isinstance(dtype, np.dtype): + assert_equal(arr.dtype, dtype) + elif isinstance(dtype, type(np.dtype)): + if dtype in (np.dtypes.StrDType, np.dtypes.BytesDType): + dtype_str = np.dtype(dtype.type).str.replace('0', '1') + assert_equal(arr.dtype, np.dtype(dtype_str)) + else: + assert_equal(arr.dtype, np.dtype(dtype.type)) + assert_(getattr(arr.flags, self.orders[order])) + + if fill_value is not None: + if arr.dtype.str.startswith('|S'): + val = str(fill_value) + else: + val = fill_value + assert_equal(arr, dtype.type(val)) + + def test_zeros(self): + self.check_function(np.zeros) + + def test_ones(self): + self.check_function(np.ones) + + def test_empty(self): + self.check_function(np.empty) + + def test_full(self): + self.check_function(np.full, 0) + self.check_function(np.full, 1) + + @pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") + def test_for_reference_leak(self): + # Make sure we have an object for reference + dim = 1 + beg = sys.getrefcount(dim) + np.zeros([dim]*10) + assert_(sys.getrefcount(dim) == beg) + np.ones([dim]*10) + assert_(sys.getrefcount(dim) == beg) + np.empty([dim]*10) + assert_(sys.getrefcount(dim) == beg) + np.full([dim]*10, 0) + assert_(sys.getrefcount(dim) == beg) + + +class TestLikeFuncs: + '''Test ones_like, zeros_like, empty_like and full_like''' + + def setup_method(self): + self.data = [ + # Array scalars + (np.array(3.), None), + (np.array(3), 'f8'), + # 1D arrays + (np.arange(6, dtype='f4'), None), + (np.arange(6), 'c16'), + # 2D C-layout arrays + (np.arange(6).reshape(2, 3), None), + (np.arange(6).reshape(3, 2), 'i1'), + # 2D F-layout arrays + (np.arange(6).reshape((2, 3), order='F'), None), + (np.arange(6).reshape((3, 2), order='F'), 'i1'), + # 3D C-layout arrays + (np.arange(24).reshape(2, 3, 4), None), + (np.arange(24).reshape(4, 3, 2), 'f4'), + # 3D F-layout arrays + (np.arange(24).reshape((2, 3, 4), order='F'), None), + (np.arange(24).reshape((4, 3, 2), order='F'), 'f4'), + # 3D non-C/F-layout arrays + (np.arange(24).reshape(2, 3, 4).swapaxes(0, 1), None), + (np.arange(24).reshape(4, 3, 2).swapaxes(0, 1), '?'), + ] + self.shapes = [(), (5,), (5,6,), (5,6,7,)] + + def compare_array_value(self, dz, value, fill_value): + if value is not None: + if fill_value: + # Conversion is close to what np.full_like uses + # but we may want to convert directly in the future + # which may result in errors (where this does not). + z = np.array(value).astype(dz.dtype) + assert_(np.all(dz == z)) + else: + assert_(np.all(dz == value)) + + def check_like_function(self, like_function, value, fill_value=False): + if fill_value: + fill_kwarg = {'fill_value': value} + else: + fill_kwarg = {} + for d, dtype in self.data: + # default (K) order, dtype + dz = like_function(d, dtype=dtype, **fill_kwarg) + assert_equal(dz.shape, d.shape) + assert_equal(np.array(dz.strides)*d.dtype.itemsize, + np.array(d.strides)*dz.dtype.itemsize) + assert_equal(d.flags.c_contiguous, dz.flags.c_contiguous) + assert_equal(d.flags.f_contiguous, dz.flags.f_contiguous) + if dtype is None: + assert_equal(dz.dtype, d.dtype) + else: + assert_equal(dz.dtype, np.dtype(dtype)) + self.compare_array_value(dz, value, fill_value) + + # C order, default dtype + dz = like_function(d, order='C', dtype=dtype, **fill_kwarg) + assert_equal(dz.shape, d.shape) + assert_(dz.flags.c_contiguous) + if dtype is None: + assert_equal(dz.dtype, d.dtype) + else: + assert_equal(dz.dtype, np.dtype(dtype)) + self.compare_array_value(dz, value, fill_value) + + # F order, default dtype + dz = like_function(d, order='F', dtype=dtype, **fill_kwarg) + assert_equal(dz.shape, d.shape) + assert_(dz.flags.f_contiguous) + if dtype is None: + assert_equal(dz.dtype, d.dtype) + else: + assert_equal(dz.dtype, np.dtype(dtype)) + self.compare_array_value(dz, value, fill_value) + + # A order + dz = like_function(d, order='A', dtype=dtype, **fill_kwarg) + assert_equal(dz.shape, d.shape) + if d.flags.f_contiguous: + assert_(dz.flags.f_contiguous) + else: + assert_(dz.flags.c_contiguous) + if dtype is None: + assert_equal(dz.dtype, d.dtype) + else: + assert_equal(dz.dtype, np.dtype(dtype)) + self.compare_array_value(dz, value, fill_value) + + # Test the 'shape' parameter + for s in self.shapes: + for o in 'CFA': + sz = like_function(d, dtype=dtype, shape=s, order=o, + **fill_kwarg) + assert_equal(sz.shape, s) + if dtype is None: + assert_equal(sz.dtype, d.dtype) + else: + assert_equal(sz.dtype, np.dtype(dtype)) + if o == 'C' or (o == 'A' and d.flags.c_contiguous): + assert_(sz.flags.c_contiguous) + elif o == 'F' or (o == 'A' and d.flags.f_contiguous): + assert_(sz.flags.f_contiguous) + self.compare_array_value(sz, value, fill_value) + + if (d.ndim != len(s)): + assert_equal(np.argsort(like_function(d, dtype=dtype, + shape=s, order='K', + **fill_kwarg).strides), + np.argsort(np.empty(s, dtype=dtype, + order='C').strides)) + else: + assert_equal(np.argsort(like_function(d, dtype=dtype, + shape=s, order='K', + **fill_kwarg).strides), + np.argsort(d.strides)) + + # Test the 'subok' parameter + class MyNDArray(np.ndarray): + pass + + a = np.array([[1, 2], [3, 4]]).view(MyNDArray) + + b = like_function(a, **fill_kwarg) + assert_(type(b) is MyNDArray) + + b = like_function(a, subok=False, **fill_kwarg) + assert_(type(b) is not MyNDArray) + + # Test invalid dtype + with assert_raises(TypeError): + a = np.array(b"abc") + like_function(a, dtype="S-1", **fill_kwarg) + + def test_ones_like(self): + self.check_like_function(np.ones_like, 1) + + def test_zeros_like(self): + self.check_like_function(np.zeros_like, 0) + + def test_empty_like(self): + self.check_like_function(np.empty_like, None) + + def test_filled_like(self): + self.check_like_function(np.full_like, 0, True) + self.check_like_function(np.full_like, 1, True) + self.check_like_function(np.full_like, 1000, True) + self.check_like_function(np.full_like, 123.456, True) + # Inf to integer casts cause invalid-value errors: ignore them. + with np.errstate(invalid="ignore"): + self.check_like_function(np.full_like, np.inf, True) + + @pytest.mark.parametrize('likefunc', [np.empty_like, np.full_like, + np.zeros_like, np.ones_like]) + @pytest.mark.parametrize('dtype', [str, bytes]) + def test_dtype_str_bytes(self, likefunc, dtype): + # Regression test for gh-19860 + a = np.arange(16).reshape(2, 8) + b = a[:, ::2] # Ensure b is not contiguous. + kwargs = {'fill_value': ''} if likefunc == np.full_like else {} + result = likefunc(b, dtype=dtype, **kwargs) + if dtype == str: + assert result.strides == (16, 4) + else: + # dtype is bytes + assert result.strides == (4, 1) + + +class TestCorrelate: + def _setup(self, dt): + self.x = np.array([1, 2, 3, 4, 5], dtype=dt) + self.xs = np.arange(1, 20)[::3] + self.y = np.array([-1, -2, -3], dtype=dt) + self.z1 = np.array([-3., -8., -14., -20., -26., -14., -5.], dtype=dt) + self.z1_4 = np.array([-2., -5., -8., -11., -14., -5.], dtype=dt) + self.z1r = np.array([-15., -22., -22., -16., -10., -4., -1.], dtype=dt) + self.z2 = np.array([-5., -14., -26., -20., -14., -8., -3.], dtype=dt) + self.z2r = np.array([-1., -4., -10., -16., -22., -22., -15.], dtype=dt) + self.zs = np.array([-3., -14., -30., -48., -66., -84., + -102., -54., -19.], dtype=dt) + + def test_float(self): + self._setup(float) + z = np.correlate(self.x, self.y, 'full') + assert_array_almost_equal(z, self.z1) + z = np.correlate(self.x, self.y[:-1], 'full') + assert_array_almost_equal(z, self.z1_4) + z = np.correlate(self.y, self.x, 'full') + assert_array_almost_equal(z, self.z2) + z = np.correlate(self.x[::-1], self.y, 'full') + assert_array_almost_equal(z, self.z1r) + z = np.correlate(self.y, self.x[::-1], 'full') + assert_array_almost_equal(z, self.z2r) + z = np.correlate(self.xs, self.y, 'full') + assert_array_almost_equal(z, self.zs) + + def test_object(self): + self._setup(Decimal) + z = np.correlate(self.x, self.y, 'full') + assert_array_almost_equal(z, self.z1) + z = np.correlate(self.y, self.x, 'full') + assert_array_almost_equal(z, self.z2) + + def test_no_overwrite(self): + d = np.ones(100) + k = np.ones(3) + np.correlate(d, k) + assert_array_equal(d, np.ones(100)) + assert_array_equal(k, np.ones(3)) + + def test_complex(self): + x = np.array([1, 2, 3, 4+1j], dtype=complex) + y = np.array([-1, -2j, 3+1j], dtype=complex) + r_z = np.array([3-1j, 6, 8+1j, 11+5j, -5+8j, -4-1j], dtype=complex) + r_z = r_z[::-1].conjugate() + z = np.correlate(y, x, mode='full') + assert_array_almost_equal(z, r_z) + + def test_zero_size(self): + with pytest.raises(ValueError): + np.correlate(np.array([]), np.ones(1000), mode='full') + with pytest.raises(ValueError): + np.correlate(np.ones(1000), np.array([]), mode='full') + + def test_mode(self): + d = np.ones(100) + k = np.ones(3) + default_mode = np.correlate(d, k, mode='valid') + with assert_warns(DeprecationWarning): + valid_mode = np.correlate(d, k, mode='v') + assert_array_equal(valid_mode, default_mode) + # integer mode + with assert_raises(ValueError): + np.correlate(d, k, mode=-1) + assert_array_equal(np.correlate(d, k, mode=0), valid_mode) + # illegal arguments + with assert_raises(TypeError): + np.correlate(d, k, mode=None) + + +class TestConvolve: + def test_object(self): + d = [1.] * 100 + k = [1.] * 3 + assert_array_almost_equal(np.convolve(d, k)[2:-2], np.full(98, 3)) + + def test_no_overwrite(self): + d = np.ones(100) + k = np.ones(3) + np.convolve(d, k) + assert_array_equal(d, np.ones(100)) + assert_array_equal(k, np.ones(3)) + + def test_mode(self): + d = np.ones(100) + k = np.ones(3) + default_mode = np.convolve(d, k, mode='full') + with assert_warns(DeprecationWarning): + full_mode = np.convolve(d, k, mode='f') + assert_array_equal(full_mode, default_mode) + # integer mode + with assert_raises(ValueError): + np.convolve(d, k, mode=-1) + assert_array_equal(np.convolve(d, k, mode=2), full_mode) + # illegal arguments + with assert_raises(TypeError): + np.convolve(d, k, mode=None) + + +class TestArgwhere: + + @pytest.mark.parametrize('nd', [0, 1, 2]) + def test_nd(self, nd): + # get an nd array with multiple elements in every dimension + x = np.empty((2,)*nd, bool) + + # none + x[...] = False + assert_equal(np.argwhere(x).shape, (0, nd)) + + # only one + x[...] = False + x.flat[0] = True + assert_equal(np.argwhere(x).shape, (1, nd)) + + # all but one + x[...] = True + x.flat[0] = False + assert_equal(np.argwhere(x).shape, (x.size - 1, nd)) + + # all + x[...] = True + assert_equal(np.argwhere(x).shape, (x.size, nd)) + + def test_2D(self): + x = np.arange(6).reshape((2, 3)) + assert_array_equal(np.argwhere(x > 1), + [[0, 2], + [1, 0], + [1, 1], + [1, 2]]) + + def test_list(self): + assert_equal(np.argwhere([4, 0, 2, 1, 3]), [[0], [2], [3], [4]]) + + +@pytest.mark.filterwarnings( + "ignore:.*set_string_function.*:DeprecationWarning" +) +class TestStringFunction: + + def test_set_string_function(self): + a = np.array([1]) + set_string_function(lambda x: "FOO", repr=True) + assert_equal(repr(a), "FOO") + set_string_function(None, repr=True) + assert_equal(repr(a), "array([1])") + + set_string_function(lambda x: "FOO", repr=False) + assert_equal(str(a), "FOO") + set_string_function(None, repr=False) + assert_equal(str(a), "[1]") + + +class TestRoll: + def test_roll1d(self): + x = np.arange(10) + xr = np.roll(x, 2) + assert_equal(xr, np.array([8, 9, 0, 1, 2, 3, 4, 5, 6, 7])) + + def test_roll2d(self): + x2 = np.reshape(np.arange(10), (2, 5)) + x2r = np.roll(x2, 1) + assert_equal(x2r, np.array([[9, 0, 1, 2, 3], [4, 5, 6, 7, 8]])) + + x2r = np.roll(x2, 1, axis=0) + assert_equal(x2r, np.array([[5, 6, 7, 8, 9], [0, 1, 2, 3, 4]])) + + x2r = np.roll(x2, 1, axis=1) + assert_equal(x2r, np.array([[4, 0, 1, 2, 3], [9, 5, 6, 7, 8]])) + + # Roll multiple axes at once. + x2r = np.roll(x2, 1, axis=(0, 1)) + assert_equal(x2r, np.array([[9, 5, 6, 7, 8], [4, 0, 1, 2, 3]])) + + x2r = np.roll(x2, (1, 0), axis=(0, 1)) + assert_equal(x2r, np.array([[5, 6, 7, 8, 9], [0, 1, 2, 3, 4]])) + + x2r = np.roll(x2, (-1, 0), axis=(0, 1)) + assert_equal(x2r, np.array([[5, 6, 7, 8, 9], [0, 1, 2, 3, 4]])) + + x2r = np.roll(x2, (0, 1), axis=(0, 1)) + assert_equal(x2r, np.array([[4, 0, 1, 2, 3], [9, 5, 6, 7, 8]])) + + x2r = np.roll(x2, (0, -1), axis=(0, 1)) + assert_equal(x2r, np.array([[1, 2, 3, 4, 0], [6, 7, 8, 9, 5]])) + + x2r = np.roll(x2, (1, 1), axis=(0, 1)) + assert_equal(x2r, np.array([[9, 5, 6, 7, 8], [4, 0, 1, 2, 3]])) + + x2r = np.roll(x2, (-1, -1), axis=(0, 1)) + assert_equal(x2r, np.array([[6, 7, 8, 9, 5], [1, 2, 3, 4, 0]])) + + # Roll the same axis multiple times. + x2r = np.roll(x2, 1, axis=(0, 0)) + assert_equal(x2r, np.array([[0, 1, 2, 3, 4], [5, 6, 7, 8, 9]])) + + x2r = np.roll(x2, 1, axis=(1, 1)) + assert_equal(x2r, np.array([[3, 4, 0, 1, 2], [8, 9, 5, 6, 7]])) + + # Roll more than one turn in either direction. + x2r = np.roll(x2, 6, axis=1) + assert_equal(x2r, np.array([[4, 0, 1, 2, 3], [9, 5, 6, 7, 8]])) + + x2r = np.roll(x2, -4, axis=1) + assert_equal(x2r, np.array([[4, 0, 1, 2, 3], [9, 5, 6, 7, 8]])) + + def test_roll_empty(self): + x = np.array([]) + assert_equal(np.roll(x, 1), np.array([])) + + +class TestRollaxis: + + # expected shape indexed by (axis, start) for array of + # shape (1, 2, 3, 4) + tgtshape = {(0, 0): (1, 2, 3, 4), (0, 1): (1, 2, 3, 4), + (0, 2): (2, 1, 3, 4), (0, 3): (2, 3, 1, 4), + (0, 4): (2, 3, 4, 1), + (1, 0): (2, 1, 3, 4), (1, 1): (1, 2, 3, 4), + (1, 2): (1, 2, 3, 4), (1, 3): (1, 3, 2, 4), + (1, 4): (1, 3, 4, 2), + (2, 0): (3, 1, 2, 4), (2, 1): (1, 3, 2, 4), + (2, 2): (1, 2, 3, 4), (2, 3): (1, 2, 3, 4), + (2, 4): (1, 2, 4, 3), + (3, 0): (4, 1, 2, 3), (3, 1): (1, 4, 2, 3), + (3, 2): (1, 2, 4, 3), (3, 3): (1, 2, 3, 4), + (3, 4): (1, 2, 3, 4)} + + def test_exceptions(self): + a = np.arange(1*2*3*4).reshape(1, 2, 3, 4) + assert_raises(AxisError, np.rollaxis, a, -5, 0) + assert_raises(AxisError, np.rollaxis, a, 0, -5) + assert_raises(AxisError, np.rollaxis, a, 4, 0) + assert_raises(AxisError, np.rollaxis, a, 0, 5) + + def test_results(self): + a = np.arange(1*2*3*4).reshape(1, 2, 3, 4).copy() + aind = np.indices(a.shape) + assert_(a.flags['OWNDATA']) + for (i, j) in self.tgtshape: + # positive axis, positive start + res = np.rollaxis(a, axis=i, start=j) + i0, i1, i2, i3 = aind[np.array(res.shape) - 1] + assert_(np.all(res[i0, i1, i2, i3] == a)) + assert_(res.shape == self.tgtshape[(i, j)], str((i,j))) + assert_(not res.flags['OWNDATA']) + + # negative axis, positive start + ip = i + 1 + res = np.rollaxis(a, axis=-ip, start=j) + i0, i1, i2, i3 = aind[np.array(res.shape) - 1] + assert_(np.all(res[i0, i1, i2, i3] == a)) + assert_(res.shape == self.tgtshape[(4 - ip, j)]) + assert_(not res.flags['OWNDATA']) + + # positive axis, negative start + jp = j + 1 if j < 4 else j + res = np.rollaxis(a, axis=i, start=-jp) + i0, i1, i2, i3 = aind[np.array(res.shape) - 1] + assert_(np.all(res[i0, i1, i2, i3] == a)) + assert_(res.shape == self.tgtshape[(i, 4 - jp)]) + assert_(not res.flags['OWNDATA']) + + # negative axis, negative start + ip = i + 1 + jp = j + 1 if j < 4 else j + res = np.rollaxis(a, axis=-ip, start=-jp) + i0, i1, i2, i3 = aind[np.array(res.shape) - 1] + assert_(np.all(res[i0, i1, i2, i3] == a)) + assert_(res.shape == self.tgtshape[(4 - ip, 4 - jp)]) + assert_(not res.flags['OWNDATA']) + + +class TestMoveaxis: + def test_move_to_end(self): + x = np.random.randn(5, 6, 7) + for source, expected in [(0, (6, 7, 5)), + (1, (5, 7, 6)), + (2, (5, 6, 7)), + (-1, (5, 6, 7))]: + actual = np.moveaxis(x, source, -1).shape + assert_(actual, expected) + + def test_move_new_position(self): + x = np.random.randn(1, 2, 3, 4) + for source, destination, expected in [ + (0, 1, (2, 1, 3, 4)), + (1, 2, (1, 3, 2, 4)), + (1, -1, (1, 3, 4, 2)), + ]: + actual = np.moveaxis(x, source, destination).shape + assert_(actual, expected) + + def test_preserve_order(self): + x = np.zeros((1, 2, 3, 4)) + for source, destination in [ + (0, 0), + (3, -1), + (-1, 3), + ([0, -1], [0, -1]), + ([2, 0], [2, 0]), + (range(4), range(4)), + ]: + actual = np.moveaxis(x, source, destination).shape + assert_(actual, (1, 2, 3, 4)) + + def test_move_multiples(self): + x = np.zeros((0, 1, 2, 3)) + for source, destination, expected in [ + ([0, 1], [2, 3], (2, 3, 0, 1)), + ([2, 3], [0, 1], (2, 3, 0, 1)), + ([0, 1, 2], [2, 3, 0], (2, 3, 0, 1)), + ([3, 0], [1, 0], (0, 3, 1, 2)), + ([0, 3], [0, 1], (0, 3, 1, 2)), + ]: + actual = np.moveaxis(x, source, destination).shape + assert_(actual, expected) + + def test_errors(self): + x = np.random.randn(1, 2, 3) + assert_raises_regex(AxisError, 'source.*out of bounds', + np.moveaxis, x, 3, 0) + assert_raises_regex(AxisError, 'source.*out of bounds', + np.moveaxis, x, -4, 0) + assert_raises_regex(AxisError, 'destination.*out of bounds', + np.moveaxis, x, 0, 5) + assert_raises_regex(ValueError, 'repeated axis in `source`', + np.moveaxis, x, [0, 0], [0, 1]) + assert_raises_regex(ValueError, 'repeated axis in `destination`', + np.moveaxis, x, [0, 1], [1, 1]) + assert_raises_regex(ValueError, 'must have the same number', + np.moveaxis, x, 0, [0, 1]) + assert_raises_regex(ValueError, 'must have the same number', + np.moveaxis, x, [0, 1], [0]) + + def test_array_likes(self): + x = np.ma.zeros((1, 2, 3)) + result = np.moveaxis(x, 0, 0) + assert_(x.shape, result.shape) + assert_(isinstance(result, np.ma.MaskedArray)) + + x = [1, 2, 3] + result = np.moveaxis(x, 0, 0) + assert_(x, list(result)) + assert_(isinstance(result, np.ndarray)) + + +class TestCross: + @pytest.mark.filterwarnings( + "ignore:.*2-dimensional vectors.*:DeprecationWarning" + ) + def test_2x2(self): + u = [1, 2] + v = [3, 4] + z = -2 + cp = np.cross(u, v) + assert_equal(cp, z) + cp = np.cross(v, u) + assert_equal(cp, -z) + + @pytest.mark.filterwarnings( + "ignore:.*2-dimensional vectors.*:DeprecationWarning" + ) + def test_2x3(self): + u = [1, 2] + v = [3, 4, 5] + z = np.array([10, -5, -2]) + cp = np.cross(u, v) + assert_equal(cp, z) + cp = np.cross(v, u) + assert_equal(cp, -z) + + def test_3x3(self): + u = [1, 2, 3] + v = [4, 5, 6] + z = np.array([-3, 6, -3]) + cp = np.cross(u, v) + assert_equal(cp, z) + cp = np.cross(v, u) + assert_equal(cp, -z) + + @pytest.mark.filterwarnings( + "ignore:.*2-dimensional vectors.*:DeprecationWarning" + ) + def test_broadcasting(self): + # Ticket #2624 (Trac #2032) + u = np.tile([1, 2], (11, 1)) + v = np.tile([3, 4], (11, 1)) + z = -2 + assert_equal(np.cross(u, v), z) + assert_equal(np.cross(v, u), -z) + assert_equal(np.cross(u, u), 0) + + u = np.tile([1, 2], (11, 1)).T + v = np.tile([3, 4, 5], (11, 1)) + z = np.tile([10, -5, -2], (11, 1)) + assert_equal(np.cross(u, v, axisa=0), z) + assert_equal(np.cross(v, u.T), -z) + assert_equal(np.cross(v, v), 0) + + u = np.tile([1, 2, 3], (11, 1)).T + v = np.tile([3, 4], (11, 1)).T + z = np.tile([-12, 9, -2], (11, 1)) + assert_equal(np.cross(u, v, axisa=0, axisb=0), z) + assert_equal(np.cross(v.T, u.T), -z) + assert_equal(np.cross(u.T, u.T), 0) + + u = np.tile([1, 2, 3], (5, 1)) + v = np.tile([4, 5, 6], (5, 1)).T + z = np.tile([-3, 6, -3], (5, 1)) + assert_equal(np.cross(u, v, axisb=0), z) + assert_equal(np.cross(v.T, u), -z) + assert_equal(np.cross(u, u), 0) + + @pytest.mark.filterwarnings( + "ignore:.*2-dimensional vectors.*:DeprecationWarning" + ) + def test_broadcasting_shapes(self): + u = np.ones((2, 1, 3)) + v = np.ones((5, 3)) + assert_equal(np.cross(u, v).shape, (2, 5, 3)) + u = np.ones((10, 3, 5)) + v = np.ones((2, 5)) + assert_equal(np.cross(u, v, axisa=1, axisb=0).shape, (10, 5, 3)) + assert_raises(AxisError, np.cross, u, v, axisa=1, axisb=2) + assert_raises(AxisError, np.cross, u, v, axisa=3, axisb=0) + u = np.ones((10, 3, 5, 7)) + v = np.ones((5, 7, 2)) + assert_equal(np.cross(u, v, axisa=1, axisc=2).shape, (10, 5, 3, 7)) + assert_raises(AxisError, np.cross, u, v, axisa=-5, axisb=2) + assert_raises(AxisError, np.cross, u, v, axisa=1, axisb=-4) + # gh-5885 + u = np.ones((3, 4, 2)) + for axisc in range(-2, 2): + assert_equal(np.cross(u, u, axisc=axisc).shape, (3, 4)) + + def test_uint8_int32_mixed_dtypes(self): + # regression test for gh-19138 + u = np.array([[195, 8, 9]], np.uint8) + v = np.array([250, 166, 68], np.int32) + z = np.array([[950, 11010, -30370]], dtype=np.int32) + assert_equal(np.cross(v, u), z) + assert_equal(np.cross(u, v), -z) + + @pytest.mark.parametrize("a, b", [(0, [1, 2]), ([1, 2], 3)]) + def test_zero_dimension(self, a, b): + with pytest.raises(ValueError) as exc: + np.cross(a, b) + assert "At least one array has zero dimension" in str(exc.value) + + +def test_outer_out_param(): + arr1 = np.ones((5,)) + arr2 = np.ones((2,)) + arr3 = np.linspace(-2, 2, 5) + out1 = np.ndarray(shape=(5,5)) + out2 = np.ndarray(shape=(2, 5)) + res1 = np.outer(arr1, arr3, out1) + assert_equal(res1, out1) + assert_equal(np.outer(arr2, arr3, out2), out2) + + +class TestIndices: + + def test_simple(self): + [x, y] = np.indices((4, 3)) + assert_array_equal(x, np.array([[0, 0, 0], + [1, 1, 1], + [2, 2, 2], + [3, 3, 3]])) + assert_array_equal(y, np.array([[0, 1, 2], + [0, 1, 2], + [0, 1, 2], + [0, 1, 2]])) + + def test_single_input(self): + [x] = np.indices((4,)) + assert_array_equal(x, np.array([0, 1, 2, 3])) + + [x] = np.indices((4,), sparse=True) + assert_array_equal(x, np.array([0, 1, 2, 3])) + + def test_scalar_input(self): + assert_array_equal([], np.indices(())) + assert_array_equal([], np.indices((), sparse=True)) + assert_array_equal([[]], np.indices((0,))) + assert_array_equal([[]], np.indices((0,), sparse=True)) + + def test_sparse(self): + [x, y] = np.indices((4,3), sparse=True) + assert_array_equal(x, np.array([[0], [1], [2], [3]])) + assert_array_equal(y, np.array([[0, 1, 2]])) + + @pytest.mark.parametrize("dtype", [np.int32, np.int64, np.float32, np.float64]) + @pytest.mark.parametrize("dims", [(), (0,), (4, 3)]) + def test_return_type(self, dtype, dims): + inds = np.indices(dims, dtype=dtype) + assert_(inds.dtype == dtype) + + for arr in np.indices(dims, dtype=dtype, sparse=True): + assert_(arr.dtype == dtype) + + +class TestRequire: + flag_names = ['C', 'C_CONTIGUOUS', 'CONTIGUOUS', + 'F', 'F_CONTIGUOUS', 'FORTRAN', + 'A', 'ALIGNED', + 'W', 'WRITEABLE', + 'O', 'OWNDATA'] + + def generate_all_false(self, dtype): + arr = np.zeros((2, 2), [('junk', 'i1'), ('a', dtype)]) + arr.setflags(write=False) + a = arr['a'] + assert_(not a.flags['C']) + assert_(not a.flags['F']) + assert_(not a.flags['O']) + assert_(not a.flags['W']) + assert_(not a.flags['A']) + return a + + def set_and_check_flag(self, flag, dtype, arr): + if dtype is None: + dtype = arr.dtype + b = np.require(arr, dtype, [flag]) + assert_(b.flags[flag]) + assert_(b.dtype == dtype) + + # a further call to np.require ought to return the same array + # unless OWNDATA is specified. + c = np.require(b, None, [flag]) + if flag[0] != 'O': + assert_(c is b) + else: + assert_(c.flags[flag]) + + def test_require_each(self): + + id = ['f8', 'i4'] + fd = [None, 'f8', 'c16'] + for idtype, fdtype, flag in itertools.product(id, fd, self.flag_names): + a = self.generate_all_false(idtype) + self.set_and_check_flag(flag, fdtype, a) + + def test_unknown_requirement(self): + a = self.generate_all_false('f8') + assert_raises(KeyError, np.require, a, None, 'Q') + + def test_non_array_input(self): + a = np.require([1, 2, 3, 4], 'i4', ['C', 'A', 'O']) + assert_(a.flags['O']) + assert_(a.flags['C']) + assert_(a.flags['A']) + assert_(a.dtype == 'i4') + assert_equal(a, [1, 2, 3, 4]) + + def test_C_and_F_simul(self): + a = self.generate_all_false('f8') + assert_raises(ValueError, np.require, a, None, ['C', 'F']) + + def test_ensure_array(self): + class ArraySubclass(np.ndarray): + pass + + a = ArraySubclass((2, 2)) + b = np.require(a, None, ['E']) + assert_(type(b) is np.ndarray) + + def test_preserve_subtype(self): + class ArraySubclass(np.ndarray): + pass + + for flag in self.flag_names: + a = ArraySubclass((2, 2)) + self.set_and_check_flag(flag, None, a) + + +class TestBroadcast: + def test_broadcast_in_args(self): + # gh-5881 + arrs = [np.empty((6, 7)), np.empty((5, 6, 1)), np.empty((7,)), + np.empty((5, 1, 7))] + mits = [np.broadcast(*arrs), + np.broadcast(np.broadcast(*arrs[:0]), np.broadcast(*arrs[0:])), + np.broadcast(np.broadcast(*arrs[:1]), np.broadcast(*arrs[1:])), + np.broadcast(np.broadcast(*arrs[:2]), np.broadcast(*arrs[2:])), + np.broadcast(arrs[0], np.broadcast(*arrs[1:-1]), arrs[-1])] + for mit in mits: + assert_equal(mit.shape, (5, 6, 7)) + assert_equal(mit.ndim, 3) + assert_equal(mit.nd, 3) + assert_equal(mit.numiter, 4) + for a, ia in zip(arrs, mit.iters): + assert_(a is ia.base) + + def test_broadcast_single_arg(self): + # gh-6899 + arrs = [np.empty((5, 6, 7))] + mit = np.broadcast(*arrs) + assert_equal(mit.shape, (5, 6, 7)) + assert_equal(mit.ndim, 3) + assert_equal(mit.nd, 3) + assert_equal(mit.numiter, 1) + assert_(arrs[0] is mit.iters[0].base) + + def test_number_of_arguments(self): + arr = np.empty((5,)) + for j in range(70): + arrs = [arr] * j + if j > 64: + assert_raises(ValueError, np.broadcast, *arrs) + else: + mit = np.broadcast(*arrs) + assert_equal(mit.numiter, j) + + def test_broadcast_error_kwargs(self): + #gh-13455 + arrs = [np.empty((5, 6, 7))] + mit = np.broadcast(*arrs) + mit2 = np.broadcast(*arrs, **{}) + assert_equal(mit.shape, mit2.shape) + assert_equal(mit.ndim, mit2.ndim) + assert_equal(mit.nd, mit2.nd) + assert_equal(mit.numiter, mit2.numiter) + assert_(mit.iters[0].base is mit2.iters[0].base) + + assert_raises(ValueError, np.broadcast, 1, **{'x': 1}) + + def test_shape_mismatch_error_message(self): + with pytest.raises(ValueError, match=r"arg 0 with shape \(1, 3\) and " + r"arg 2 with shape \(2,\)"): + np.broadcast([[1, 2, 3]], [[4], [5]], [6, 7]) + + +class TestKeepdims: + + class sub_array(np.ndarray): + def sum(self, axis=None, dtype=None, out=None): + return np.ndarray.sum(self, axis, dtype, out, keepdims=True) + + def test_raise(self): + sub_class = self.sub_array + x = np.arange(30).view(sub_class) + assert_raises(TypeError, np.sum, x, keepdims=True) + + +class TestTensordot: + + def test_zero_dimension(self): + # Test resolution to issue #5663 + a = np.ndarray((3,0)) + b = np.ndarray((0,4)) + td = np.tensordot(a, b, (1, 0)) + assert_array_equal(td, np.dot(a, b)) + assert_array_equal(td, np.einsum('ij,jk', a, b)) + + def test_zero_dimensional(self): + # gh-12130 + arr_0d = np.array(1) + ret = np.tensordot(arr_0d, arr_0d, ([], [])) # contracting no axes is well defined + assert_array_equal(ret, arr_0d) + + +class TestAsType: + + def test_astype(self): + data = [[1, 2], [3, 4]] + actual = np.astype( + np.array(data, dtype=np.int64), np.uint32 + ) + expected = np.array(data, dtype=np.uint32) + + assert_array_equal(actual, expected) + assert_equal(actual.dtype, expected.dtype) + + assert np.shares_memory( + actual, np.astype(actual, actual.dtype, copy=False) + ) + + with pytest.raises(TypeError, match="Input should be a NumPy array"): + np.astype(data, np.float64) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_numerictypes.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_numerictypes.py new file mode 100644 index 0000000000000000000000000000000000000000..f09622e422a1645c8819c929cbae7154731a262a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_numerictypes.py @@ -0,0 +1,619 @@ +import sys +import itertools + +import pytest +import numpy as np +import numpy._core.numerictypes as nt +from numpy._core.numerictypes import ( + issctype, sctype2char, maximum_sctype, sctypes +) +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_raises_regex, IS_PYPY +) + +# This is the structure of the table used for plain objects: +# +# +-+-+-+ +# |x|y|z| +# +-+-+-+ + +# Structure of a plain array description: +Pdescr = [ + ('x', 'i4', (2,)), + ('y', 'f8', (2, 2)), + ('z', 'u1')] + +# A plain list of tuples with values for testing: +PbufferT = [ + # x y z + ([3, 2], [[6., 4.], [6., 4.]], 8), + ([4, 3], [[7., 5.], [7., 5.]], 9), + ] + + +# This is the structure of the table used for nested objects (DON'T PANIC!): +# +# +-+---------------------------------+-----+----------+-+-+ +# |x|Info |color|info |y|z| +# | +-----+--+----------------+----+--+ +----+-----+ | | +# | |value|y2|Info2 |name|z2| |Name|Value| | | +# | | | +----+-----+--+--+ | | | | | | | +# | | | |name|value|y3|z3| | | | | | | | +# +-+-----+--+----+-----+--+--+----+--+-----+----+-----+-+-+ +# + +# The corresponding nested array description: +Ndescr = [ + ('x', 'i4', (2,)), + ('Info', [ + ('value', 'c16'), + ('y2', 'f8'), + ('Info2', [ + ('name', 'S2'), + ('value', 'c16', (2,)), + ('y3', 'f8', (2,)), + ('z3', 'u4', (2,))]), + ('name', 'S2'), + ('z2', 'b1')]), + ('color', 'S2'), + ('info', [ + ('Name', 'U8'), + ('Value', 'c16')]), + ('y', 'f8', (2, 2)), + ('z', 'u1')] + +NbufferT = [ + # x Info color info y z + # value y2 Info2 name z2 Name Value + # name value y3 z3 + ([3, 2], (6j, 6., (b'nn', [6j, 4j], [6., 4.], [1, 2]), b'NN', True), + b'cc', ('NN', 6j), [[6., 4.], [6., 4.]], 8), + ([4, 3], (7j, 7., (b'oo', [7j, 5j], [7., 5.], [2, 1]), b'OO', False), + b'dd', ('OO', 7j), [[7., 5.], [7., 5.]], 9), + ] + + +byteorder = {'little':'<', 'big':'>'}[sys.byteorder] + +def normalize_descr(descr): + "Normalize a description adding the platform byteorder." + + out = [] + for item in descr: + dtype = item[1] + if isinstance(dtype, str): + if dtype[0] not in ['|', '<', '>']: + onebyte = dtype[1:] == "1" + if onebyte or dtype[0] in ['S', 'V', 'b']: + dtype = "|" + dtype + else: + dtype = byteorder + dtype + if len(item) > 2 and np.prod(item[2]) > 1: + nitem = (item[0], dtype, item[2]) + else: + nitem = (item[0], dtype) + out.append(nitem) + elif isinstance(dtype, list): + l = normalize_descr(dtype) + out.append((item[0], l)) + else: + raise ValueError("Expected a str or list and got %s" % + (type(item))) + return out + + +############################################################ +# Creation tests +############################################################ + +class CreateZeros: + """Check the creation of heterogeneous arrays zero-valued""" + + def test_zeros0D(self): + """Check creation of 0-dimensional objects""" + h = np.zeros((), dtype=self._descr) + assert_(normalize_descr(self._descr) == h.dtype.descr) + assert_(h.dtype.fields['x'][0].name[:4] == 'void') + assert_(h.dtype.fields['x'][0].char == 'V') + assert_(h.dtype.fields['x'][0].type == np.void) + # A small check that data is ok + assert_equal(h['z'], np.zeros((), dtype='u1')) + + def test_zerosSD(self): + """Check creation of single-dimensional objects""" + h = np.zeros((2,), dtype=self._descr) + assert_(normalize_descr(self._descr) == h.dtype.descr) + assert_(h.dtype['y'].name[:4] == 'void') + assert_(h.dtype['y'].char == 'V') + assert_(h.dtype['y'].type == np.void) + # A small check that data is ok + assert_equal(h['z'], np.zeros((2,), dtype='u1')) + + def test_zerosMD(self): + """Check creation of multi-dimensional objects""" + h = np.zeros((2, 3), dtype=self._descr) + assert_(normalize_descr(self._descr) == h.dtype.descr) + assert_(h.dtype['z'].name == 'uint8') + assert_(h.dtype['z'].char == 'B') + assert_(h.dtype['z'].type == np.uint8) + # A small check that data is ok + assert_equal(h['z'], np.zeros((2, 3), dtype='u1')) + + +class TestCreateZerosPlain(CreateZeros): + """Check the creation of heterogeneous arrays zero-valued (plain)""" + _descr = Pdescr + +class TestCreateZerosNested(CreateZeros): + """Check the creation of heterogeneous arrays zero-valued (nested)""" + _descr = Ndescr + + +class CreateValues: + """Check the creation of heterogeneous arrays with values""" + + def test_tuple(self): + """Check creation from tuples""" + h = np.array(self._buffer, dtype=self._descr) + assert_(normalize_descr(self._descr) == h.dtype.descr) + if self.multiple_rows: + assert_(h.shape == (2,)) + else: + assert_(h.shape == ()) + + def test_list_of_tuple(self): + """Check creation from list of tuples""" + h = np.array([self._buffer], dtype=self._descr) + assert_(normalize_descr(self._descr) == h.dtype.descr) + if self.multiple_rows: + assert_(h.shape == (1, 2)) + else: + assert_(h.shape == (1,)) + + def test_list_of_list_of_tuple(self): + """Check creation from list of list of tuples""" + h = np.array([[self._buffer]], dtype=self._descr) + assert_(normalize_descr(self._descr) == h.dtype.descr) + if self.multiple_rows: + assert_(h.shape == (1, 1, 2)) + else: + assert_(h.shape == (1, 1)) + + +class TestCreateValuesPlainSingle(CreateValues): + """Check the creation of heterogeneous arrays (plain, single row)""" + _descr = Pdescr + multiple_rows = 0 + _buffer = PbufferT[0] + +class TestCreateValuesPlainMultiple(CreateValues): + """Check the creation of heterogeneous arrays (plain, multiple rows)""" + _descr = Pdescr + multiple_rows = 1 + _buffer = PbufferT + +class TestCreateValuesNestedSingle(CreateValues): + """Check the creation of heterogeneous arrays (nested, single row)""" + _descr = Ndescr + multiple_rows = 0 + _buffer = NbufferT[0] + +class TestCreateValuesNestedMultiple(CreateValues): + """Check the creation of heterogeneous arrays (nested, multiple rows)""" + _descr = Ndescr + multiple_rows = 1 + _buffer = NbufferT + + +############################################################ +# Reading tests +############################################################ + +class ReadValuesPlain: + """Check the reading of values in heterogeneous arrays (plain)""" + + def test_access_fields(self): + h = np.array(self._buffer, dtype=self._descr) + if not self.multiple_rows: + assert_(h.shape == ()) + assert_equal(h['x'], np.array(self._buffer[0], dtype='i4')) + assert_equal(h['y'], np.array(self._buffer[1], dtype='f8')) + assert_equal(h['z'], np.array(self._buffer[2], dtype='u1')) + else: + assert_(len(h) == 2) + assert_equal(h['x'], np.array([self._buffer[0][0], + self._buffer[1][0]], dtype='i4')) + assert_equal(h['y'], np.array([self._buffer[0][1], + self._buffer[1][1]], dtype='f8')) + assert_equal(h['z'], np.array([self._buffer[0][2], + self._buffer[1][2]], dtype='u1')) + + +class TestReadValuesPlainSingle(ReadValuesPlain): + """Check the creation of heterogeneous arrays (plain, single row)""" + _descr = Pdescr + multiple_rows = 0 + _buffer = PbufferT[0] + +class TestReadValuesPlainMultiple(ReadValuesPlain): + """Check the values of heterogeneous arrays (plain, multiple rows)""" + _descr = Pdescr + multiple_rows = 1 + _buffer = PbufferT + +class ReadValuesNested: + """Check the reading of values in heterogeneous arrays (nested)""" + + def test_access_top_fields(self): + """Check reading the top fields of a nested array""" + h = np.array(self._buffer, dtype=self._descr) + if not self.multiple_rows: + assert_(h.shape == ()) + assert_equal(h['x'], np.array(self._buffer[0], dtype='i4')) + assert_equal(h['y'], np.array(self._buffer[4], dtype='f8')) + assert_equal(h['z'], np.array(self._buffer[5], dtype='u1')) + else: + assert_(len(h) == 2) + assert_equal(h['x'], np.array([self._buffer[0][0], + self._buffer[1][0]], dtype='i4')) + assert_equal(h['y'], np.array([self._buffer[0][4], + self._buffer[1][4]], dtype='f8')) + assert_equal(h['z'], np.array([self._buffer[0][5], + self._buffer[1][5]], dtype='u1')) + + def test_nested1_acessors(self): + """Check reading the nested fields of a nested array (1st level)""" + h = np.array(self._buffer, dtype=self._descr) + if not self.multiple_rows: + assert_equal(h['Info']['value'], + np.array(self._buffer[1][0], dtype='c16')) + assert_equal(h['Info']['y2'], + np.array(self._buffer[1][1], dtype='f8')) + assert_equal(h['info']['Name'], + np.array(self._buffer[3][0], dtype='U2')) + assert_equal(h['info']['Value'], + np.array(self._buffer[3][1], dtype='c16')) + else: + assert_equal(h['Info']['value'], + np.array([self._buffer[0][1][0], + self._buffer[1][1][0]], + dtype='c16')) + assert_equal(h['Info']['y2'], + np.array([self._buffer[0][1][1], + self._buffer[1][1][1]], + dtype='f8')) + assert_equal(h['info']['Name'], + np.array([self._buffer[0][3][0], + self._buffer[1][3][0]], + dtype='U2')) + assert_equal(h['info']['Value'], + np.array([self._buffer[0][3][1], + self._buffer[1][3][1]], + dtype='c16')) + + def test_nested2_acessors(self): + """Check reading the nested fields of a nested array (2nd level)""" + h = np.array(self._buffer, dtype=self._descr) + if not self.multiple_rows: + assert_equal(h['Info']['Info2']['value'], + np.array(self._buffer[1][2][1], dtype='c16')) + assert_equal(h['Info']['Info2']['z3'], + np.array(self._buffer[1][2][3], dtype='u4')) + else: + assert_equal(h['Info']['Info2']['value'], + np.array([self._buffer[0][1][2][1], + self._buffer[1][1][2][1]], + dtype='c16')) + assert_equal(h['Info']['Info2']['z3'], + np.array([self._buffer[0][1][2][3], + self._buffer[1][1][2][3]], + dtype='u4')) + + def test_nested1_descriptor(self): + """Check access nested descriptors of a nested array (1st level)""" + h = np.array(self._buffer, dtype=self._descr) + assert_(h.dtype['Info']['value'].name == 'complex128') + assert_(h.dtype['Info']['y2'].name == 'float64') + assert_(h.dtype['info']['Name'].name == 'str256') + assert_(h.dtype['info']['Value'].name == 'complex128') + + def test_nested2_descriptor(self): + """Check access nested descriptors of a nested array (2nd level)""" + h = np.array(self._buffer, dtype=self._descr) + assert_(h.dtype['Info']['Info2']['value'].name == 'void256') + assert_(h.dtype['Info']['Info2']['z3'].name == 'void64') + + +class TestReadValuesNestedSingle(ReadValuesNested): + """Check the values of heterogeneous arrays (nested, single row)""" + _descr = Ndescr + multiple_rows = False + _buffer = NbufferT[0] + +class TestReadValuesNestedMultiple(ReadValuesNested): + """Check the values of heterogeneous arrays (nested, multiple rows)""" + _descr = Ndescr + multiple_rows = True + _buffer = NbufferT + +class TestEmptyField: + def test_assign(self): + a = np.arange(10, dtype=np.float32) + a.dtype = [("int", "<0i4"), ("float", "<2f4")] + assert_(a['int'].shape == (5, 0)) + assert_(a['float'].shape == (5, 2)) + + +class TestMultipleFields: + def setup_method(self): + self.ary = np.array([(1, 2, 3, 4), (5, 6, 7, 8)], dtype='i4,f4,i2,c8') + + def _bad_call(self): + return self.ary['f0', 'f1'] + + def test_no_tuple(self): + assert_raises(IndexError, self._bad_call) + + def test_return(self): + res = self.ary[['f0', 'f2']].tolist() + assert_(res == [(1, 3), (5, 7)]) + + +class TestIsSubDType: + # scalar types can be promoted into dtypes + wrappers = [np.dtype, lambda x: x] + + def test_both_abstract(self): + assert_(np.issubdtype(np.floating, np.inexact)) + assert_(not np.issubdtype(np.inexact, np.floating)) + + def test_same(self): + for cls in (np.float32, np.int32): + for w1, w2 in itertools.product(self.wrappers, repeat=2): + assert_(np.issubdtype(w1(cls), w2(cls))) + + def test_subclass(self): + # note we cannot promote floating to a dtype, as it would turn into a + # concrete type + for w in self.wrappers: + assert_(np.issubdtype(w(np.float32), np.floating)) + assert_(np.issubdtype(w(np.float64), np.floating)) + + def test_subclass_backwards(self): + for w in self.wrappers: + assert_(not np.issubdtype(np.floating, w(np.float32))) + assert_(not np.issubdtype(np.floating, w(np.float64))) + + def test_sibling_class(self): + for w1, w2 in itertools.product(self.wrappers, repeat=2): + assert_(not np.issubdtype(w1(np.float32), w2(np.float64))) + assert_(not np.issubdtype(w1(np.float64), w2(np.float32))) + + def test_nondtype_nonscalartype(self): + # See gh-14619 and gh-9505 which introduced the deprecation to fix + # this. These tests are directly taken from gh-9505 + assert not np.issubdtype(np.float32, 'float64') + assert not np.issubdtype(np.float32, 'f8') + assert not np.issubdtype(np.int32, str) + assert not np.issubdtype(np.int32, 'int64') + assert not np.issubdtype(np.str_, 'void') + # for the following the correct spellings are + # np.integer, np.floating, or np.complexfloating respectively: + assert not np.issubdtype(np.int8, int) # np.int8 is never np.int_ + assert not np.issubdtype(np.float32, float) + assert not np.issubdtype(np.complex64, complex) + assert not np.issubdtype(np.float32, "float") + assert not np.issubdtype(np.float64, "f") + + # Test the same for the correct first datatype and abstract one + # in the case of int, float, complex: + assert np.issubdtype(np.float64, 'float64') + assert np.issubdtype(np.float64, 'f8') + assert np.issubdtype(np.str_, str) + assert np.issubdtype(np.int64, 'int64') + assert np.issubdtype(np.void, 'void') + assert np.issubdtype(np.int8, np.integer) + assert np.issubdtype(np.float32, np.floating) + assert np.issubdtype(np.complex64, np.complexfloating) + assert np.issubdtype(np.float64, "float") + assert np.issubdtype(np.float32, "f") + + +class TestIsDType: + """ + Check correctness of `np.isdtype`. The test considers different argument + configurations: `np.isdtype(dtype, k1)` and `np.isdtype(dtype, (k1, k2))` + with concrete dtypes and dtype groups. + """ + dtype_group_dict = { + "signed integer": sctypes["int"], + "unsigned integer": sctypes["uint"], + "integral": sctypes["int"] + sctypes["uint"], + "real floating": sctypes["float"], + "complex floating": sctypes["complex"], + "numeric": ( + sctypes["int"] + sctypes["uint"] + sctypes["float"] + + sctypes["complex"] + ) + } + + @pytest.mark.parametrize( + "dtype,close_dtype", + [ + (np.int64, np.int32), (np.uint64, np.uint32), + (np.float64, np.float32), (np.complex128, np.complex64) + ] + ) + @pytest.mark.parametrize( + "dtype_group", + [ + None, "signed integer", "unsigned integer", "integral", + "real floating", "complex floating", "numeric" + ] + ) + def test_isdtype(self, dtype, close_dtype, dtype_group): + # First check if same dtypes return `true` and different ones + # give `false` (even if they're close in the dtype hierarchy!) + if dtype_group is None: + assert np.isdtype(dtype, dtype) + assert not np.isdtype(dtype, close_dtype) + assert np.isdtype(dtype, (dtype, close_dtype)) + + # Check that dtype and a dtype group that it belongs to + # return `true`, and `false` otherwise. + elif dtype in self.dtype_group_dict[dtype_group]: + assert np.isdtype(dtype, dtype_group) + assert np.isdtype(dtype, (close_dtype, dtype_group)) + else: + assert not np.isdtype(dtype, dtype_group) + + def test_isdtype_invalid_args(self): + with assert_raises_regex(TypeError, r".*must be a NumPy dtype.*"): + np.isdtype("int64", np.int64) + with assert_raises_regex(TypeError, r".*kind argument must.*"): + np.isdtype(np.int64, 1) + with assert_raises_regex(ValueError, r".*not a known kind name.*"): + np.isdtype(np.int64, "int64") + + def test_sctypes_complete(self): + # issue 26439: int32/intc were masking eachother on 32-bit builds + assert np.int32 in sctypes['int'] + assert np.intc in sctypes['int'] + assert np.int64 in sctypes['int'] + assert np.uint32 in sctypes['uint'] + assert np.uintc in sctypes['uint'] + assert np.uint64 in sctypes['uint'] + +class TestSctypeDict: + def test_longdouble(self): + assert_(np._core.sctypeDict['float64'] is not np.longdouble) + assert_(np._core.sctypeDict['complex128'] is not np.clongdouble) + + def test_ulong(self): + assert np._core.sctypeDict['ulong'] is np.ulong + assert np.dtype(np.ulong) is np.dtype("ulong") + assert np.dtype(np.ulong).itemsize == np.dtype(np.long).itemsize + + +@pytest.mark.filterwarnings("ignore:.*maximum_sctype.*:DeprecationWarning") +class TestMaximumSctype: + + # note that parametrizing with sctype['int'] and similar would skip types + # with the same size (gh-11923) + + @pytest.mark.parametrize( + 't', [np.byte, np.short, np.intc, np.long, np.longlong] + ) + def test_int(self, t): + assert_equal(maximum_sctype(t), np._core.sctypes['int'][-1]) + + @pytest.mark.parametrize( + 't', [np.ubyte, np.ushort, np.uintc, np.ulong, np.ulonglong] + ) + def test_uint(self, t): + assert_equal(maximum_sctype(t), np._core.sctypes['uint'][-1]) + + @pytest.mark.parametrize('t', [np.half, np.single, np.double, np.longdouble]) + def test_float(self, t): + assert_equal(maximum_sctype(t), np._core.sctypes['float'][-1]) + + @pytest.mark.parametrize('t', [np.csingle, np.cdouble, np.clongdouble]) + def test_complex(self, t): + assert_equal(maximum_sctype(t), np._core.sctypes['complex'][-1]) + + @pytest.mark.parametrize('t', [np.bool, np.object_, np.str_, np.bytes_, + np.void]) + def test_other(self, t): + assert_equal(maximum_sctype(t), t) + + +class Test_sctype2char: + # This function is old enough that we're really just documenting the quirks + # at this point. + + def test_scalar_type(self): + assert_equal(sctype2char(np.double), 'd') + assert_equal(sctype2char(np.long), 'l') + assert_equal(sctype2char(np.int_), np.array(0).dtype.char) + assert_equal(sctype2char(np.str_), 'U') + assert_equal(sctype2char(np.bytes_), 'S') + + def test_other_type(self): + assert_equal(sctype2char(float), 'd') + assert_equal(sctype2char(list), 'O') + assert_equal(sctype2char(np.ndarray), 'O') + + def test_third_party_scalar_type(self): + from numpy._core._rational_tests import rational + assert_raises(KeyError, sctype2char, rational) + assert_raises(KeyError, sctype2char, rational(1)) + + def test_array_instance(self): + assert_equal(sctype2char(np.array([1.0, 2.0])), 'd') + + def test_abstract_type(self): + assert_raises(KeyError, sctype2char, np.floating) + + def test_non_type(self): + assert_raises(ValueError, sctype2char, 1) + +@pytest.mark.parametrize("rep, expected", [ + (np.int32, True), + (list, False), + (1.1, False), + (str, True), + (np.dtype(np.float64), True), + (np.dtype((np.int16, (3, 4))), True), + (np.dtype([('a', np.int8)]), True), + ]) +def test_issctype(rep, expected): + # ensure proper identification of scalar + # data-types by issctype() + actual = issctype(rep) + assert_equal(actual, expected) + + +@pytest.mark.skipif(sys.flags.optimize > 1, + reason="no docstrings present to inspect when PYTHONOPTIMIZE/Py_OptimizeFlag > 1") +@pytest.mark.xfail(IS_PYPY, + reason="PyPy cannot modify tp_doc after PyType_Ready") +class TestDocStrings: + def test_platform_dependent_aliases(self): + if np.int64 is np.int_: + assert_('int64' in np.int_.__doc__) + elif np.int64 is np.longlong: + assert_('int64' in np.longlong.__doc__) + + +class TestScalarTypeNames: + # gh-9799 + + numeric_types = [ + np.byte, np.short, np.intc, np.long, np.longlong, + np.ubyte, np.ushort, np.uintc, np.ulong, np.ulonglong, + np.half, np.single, np.double, np.longdouble, + np.csingle, np.cdouble, np.clongdouble, + ] + + def test_names_are_unique(self): + # none of the above may be aliases for each other + assert len(set(self.numeric_types)) == len(self.numeric_types) + + # names must be unique + names = [t.__name__ for t in self.numeric_types] + assert len(set(names)) == len(names) + + @pytest.mark.parametrize('t', numeric_types) + def test_names_reflect_attributes(self, t): + """ Test that names correspond to where the type is under ``np.`` """ + assert getattr(np, t.__name__) is t + + @pytest.mark.parametrize('t', numeric_types) + def test_names_are_undersood_by_dtype(self, t): + """ Test the dtype constructor maps names back to the type """ + assert np.dtype(t.__name__).type is t + + +class TestBoolDefinition: + def test_bool_definition(self): + assert nt.bool is np.bool diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_overrides.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_overrides.py new file mode 100644 index 0000000000000000000000000000000000000000..025cd001ff0a627c7ddb85f90574603da9ab160f --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_overrides.py @@ -0,0 +1,739 @@ +import inspect +import sys +import os +import tempfile +from io import StringIO +from unittest import mock +import pickle + +import pytest + +import numpy as np +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_raises_regex) +from numpy._core.overrides import ( + _get_implementing_args, array_function_dispatch, + verify_matching_signatures) + + +def _return_not_implemented(self, *args, **kwargs): + return NotImplemented + + +# need to define this at the top level to test pickling +@array_function_dispatch(lambda array: (array,)) +def dispatched_one_arg(array): + """Docstring.""" + return 'original' + + +@array_function_dispatch(lambda array1, array2: (array1, array2)) +def dispatched_two_arg(array1, array2): + """Docstring.""" + return 'original' + + +class TestGetImplementingArgs: + + def test_ndarray(self): + array = np.array(1) + + args = _get_implementing_args([array]) + assert_equal(list(args), [array]) + + args = _get_implementing_args([array, array]) + assert_equal(list(args), [array]) + + args = _get_implementing_args([array, 1]) + assert_equal(list(args), [array]) + + args = _get_implementing_args([1, array]) + assert_equal(list(args), [array]) + + def test_ndarray_subclasses(self): + + class OverrideSub(np.ndarray): + __array_function__ = _return_not_implemented + + class NoOverrideSub(np.ndarray): + pass + + array = np.array(1).view(np.ndarray) + override_sub = np.array(1).view(OverrideSub) + no_override_sub = np.array(1).view(NoOverrideSub) + + args = _get_implementing_args([array, override_sub]) + assert_equal(list(args), [override_sub, array]) + + args = _get_implementing_args([array, no_override_sub]) + assert_equal(list(args), [no_override_sub, array]) + + args = _get_implementing_args( + [override_sub, no_override_sub]) + assert_equal(list(args), [override_sub, no_override_sub]) + + def test_ndarray_and_duck_array(self): + + class Other: + __array_function__ = _return_not_implemented + + array = np.array(1) + other = Other() + + args = _get_implementing_args([other, array]) + assert_equal(list(args), [other, array]) + + args = _get_implementing_args([array, other]) + assert_equal(list(args), [array, other]) + + def test_ndarray_subclass_and_duck_array(self): + + class OverrideSub(np.ndarray): + __array_function__ = _return_not_implemented + + class Other: + __array_function__ = _return_not_implemented + + array = np.array(1) + subarray = np.array(1).view(OverrideSub) + other = Other() + + assert_equal(_get_implementing_args([array, subarray, other]), + [subarray, array, other]) + assert_equal(_get_implementing_args([array, other, subarray]), + [subarray, array, other]) + + def test_many_duck_arrays(self): + + class A: + __array_function__ = _return_not_implemented + + class B(A): + __array_function__ = _return_not_implemented + + class C(A): + __array_function__ = _return_not_implemented + + class D: + __array_function__ = _return_not_implemented + + a = A() + b = B() + c = C() + d = D() + + assert_equal(_get_implementing_args([1]), []) + assert_equal(_get_implementing_args([a]), [a]) + assert_equal(_get_implementing_args([a, 1]), [a]) + assert_equal(_get_implementing_args([a, a, a]), [a]) + assert_equal(_get_implementing_args([a, d, a]), [a, d]) + assert_equal(_get_implementing_args([a, b]), [b, a]) + assert_equal(_get_implementing_args([b, a]), [b, a]) + assert_equal(_get_implementing_args([a, b, c]), [b, c, a]) + assert_equal(_get_implementing_args([a, c, b]), [c, b, a]) + + def test_too_many_duck_arrays(self): + namespace = dict(__array_function__=_return_not_implemented) + types = [type('A' + str(i), (object,), namespace) for i in range(65)] + relevant_args = [t() for t in types] + + actual = _get_implementing_args(relevant_args[:64]) + assert_equal(actual, relevant_args[:64]) + + with assert_raises_regex(TypeError, 'distinct argument types'): + _get_implementing_args(relevant_args) + + +class TestNDArrayArrayFunction: + + def test_method(self): + + class Other: + __array_function__ = _return_not_implemented + + class NoOverrideSub(np.ndarray): + pass + + class OverrideSub(np.ndarray): + __array_function__ = _return_not_implemented + + array = np.array([1]) + other = Other() + no_override_sub = array.view(NoOverrideSub) + override_sub = array.view(OverrideSub) + + result = array.__array_function__(func=dispatched_two_arg, + types=(np.ndarray,), + args=(array, 1.), kwargs={}) + assert_equal(result, 'original') + + result = array.__array_function__(func=dispatched_two_arg, + types=(np.ndarray, Other), + args=(array, other), kwargs={}) + assert_(result is NotImplemented) + + result = array.__array_function__(func=dispatched_two_arg, + types=(np.ndarray, NoOverrideSub), + args=(array, no_override_sub), + kwargs={}) + assert_equal(result, 'original') + + result = array.__array_function__(func=dispatched_two_arg, + types=(np.ndarray, OverrideSub), + args=(array, override_sub), + kwargs={}) + assert_equal(result, 'original') + + with assert_raises_regex(TypeError, 'no implementation found'): + np.concatenate((array, other)) + + expected = np.concatenate((array, array)) + result = np.concatenate((array, no_override_sub)) + assert_equal(result, expected.view(NoOverrideSub)) + result = np.concatenate((array, override_sub)) + assert_equal(result, expected.view(OverrideSub)) + + def test_no_wrapper(self): + # This shouldn't happen unless a user intentionally calls + # __array_function__ with invalid arguments, but check that we raise + # an appropriate error all the same. + array = np.array(1) + func = lambda x: x + with assert_raises_regex(AttributeError, '_implementation'): + array.__array_function__(func=func, types=(np.ndarray,), + args=(array,), kwargs={}) + + +class TestArrayFunctionDispatch: + + def test_pickle(self): + for proto in range(2, pickle.HIGHEST_PROTOCOL + 1): + roundtripped = pickle.loads( + pickle.dumps(dispatched_one_arg, protocol=proto)) + assert_(roundtripped is dispatched_one_arg) + + def test_name_and_docstring(self): + assert_equal(dispatched_one_arg.__name__, 'dispatched_one_arg') + if sys.flags.optimize < 2: + assert_equal(dispatched_one_arg.__doc__, 'Docstring.') + + def test_interface(self): + + class MyArray: + def __array_function__(self, func, types, args, kwargs): + return (self, func, types, args, kwargs) + + original = MyArray() + (obj, func, types, args, kwargs) = dispatched_one_arg(original) + assert_(obj is original) + assert_(func is dispatched_one_arg) + assert_equal(set(types), {MyArray}) + # assert_equal uses the overloaded np.iscomplexobj() internally + assert_(args == (original,)) + assert_equal(kwargs, {}) + + def test_not_implemented(self): + + class MyArray: + def __array_function__(self, func, types, args, kwargs): + return NotImplemented + + array = MyArray() + with assert_raises_regex(TypeError, 'no implementation found'): + dispatched_one_arg(array) + + def test_where_dispatch(self): + + class DuckArray: + def __array_function__(self, ufunc, method, *inputs, **kwargs): + return "overridden" + + array = np.array(1) + duck_array = DuckArray() + + result = np.std(array, where=duck_array) + + assert_equal(result, "overridden") + + +class TestVerifyMatchingSignatures: + + def test_verify_matching_signatures(self): + + verify_matching_signatures(lambda x: 0, lambda x: 0) + verify_matching_signatures(lambda x=None: 0, lambda x=None: 0) + verify_matching_signatures(lambda x=1: 0, lambda x=None: 0) + + with assert_raises(RuntimeError): + verify_matching_signatures(lambda a: 0, lambda b: 0) + with assert_raises(RuntimeError): + verify_matching_signatures(lambda x: 0, lambda x=None: 0) + with assert_raises(RuntimeError): + verify_matching_signatures(lambda x=None: 0, lambda y=None: 0) + with assert_raises(RuntimeError): + verify_matching_signatures(lambda x=1: 0, lambda y=1: 0) + + def test_array_function_dispatch(self): + + with assert_raises(RuntimeError): + @array_function_dispatch(lambda x: (x,)) + def f(y): + pass + + # should not raise + @array_function_dispatch(lambda x: (x,), verify=False) + def f(y): + pass + + +def _new_duck_type_and_implements(): + """Create a duck array type and implements functions.""" + HANDLED_FUNCTIONS = {} + + class MyArray: + def __array_function__(self, func, types, args, kwargs): + if func not in HANDLED_FUNCTIONS: + return NotImplemented + if not all(issubclass(t, MyArray) for t in types): + return NotImplemented + return HANDLED_FUNCTIONS[func](*args, **kwargs) + + def implements(numpy_function): + """Register an __array_function__ implementations.""" + def decorator(func): + HANDLED_FUNCTIONS[numpy_function] = func + return func + return decorator + + return (MyArray, implements) + + +class TestArrayFunctionImplementation: + + def test_one_arg(self): + MyArray, implements = _new_duck_type_and_implements() + + @implements(dispatched_one_arg) + def _(array): + return 'myarray' + + assert_equal(dispatched_one_arg(1), 'original') + assert_equal(dispatched_one_arg(MyArray()), 'myarray') + + def test_optional_args(self): + MyArray, implements = _new_duck_type_and_implements() + + @array_function_dispatch(lambda array, option=None: (array,)) + def func_with_option(array, option='default'): + return option + + @implements(func_with_option) + def my_array_func_with_option(array, new_option='myarray'): + return new_option + + # we don't need to implement every option on __array_function__ + # implementations + assert_equal(func_with_option(1), 'default') + assert_equal(func_with_option(1, option='extra'), 'extra') + assert_equal(func_with_option(MyArray()), 'myarray') + with assert_raises(TypeError): + func_with_option(MyArray(), option='extra') + + # but new options on implementations can't be used + result = my_array_func_with_option(MyArray(), new_option='yes') + assert_equal(result, 'yes') + with assert_raises(TypeError): + func_with_option(MyArray(), new_option='no') + + def test_not_implemented(self): + MyArray, implements = _new_duck_type_and_implements() + + @array_function_dispatch(lambda array: (array,), module='my') + def func(array): + return array + + array = np.array(1) + assert_(func(array) is array) + assert_equal(func.__module__, 'my') + + with assert_raises_regex( + TypeError, "no implementation found for 'my.func'"): + func(MyArray()) + + @pytest.mark.parametrize("name", ["concatenate", "mean", "asarray"]) + def test_signature_error_message_simple(self, name): + func = getattr(np, name) + try: + # all of these functions need an argument: + func() + except TypeError as e: + exc = e + + assert exc.args[0].startswith(f"{name}()") + + def test_signature_error_message(self): + # The lambda function will be named "", but the TypeError + # should show the name as "func" + def _dispatcher(): + return () + + @array_function_dispatch(_dispatcher) + def func(): + pass + + try: + func._implementation(bad_arg=3) + except TypeError as e: + expected_exception = e + + try: + func(bad_arg=3) + raise AssertionError("must fail") + except TypeError as exc: + if exc.args[0].startswith("_dispatcher"): + # We replace the qualname currently, but it used `__name__` + # (relevant functions have the same name and qualname anyway) + pytest.skip("Python version is not using __qualname__ for " + "TypeError formatting.") + + assert exc.args == expected_exception.args + + @pytest.mark.parametrize("value", [234, "this func is not replaced"]) + def test_dispatcher_error(self, value): + # If the dispatcher raises an error, we must not attempt to mutate it + error = TypeError(value) + + def dispatcher(): + raise error + + @array_function_dispatch(dispatcher) + def func(): + return 3 + + try: + func() + raise AssertionError("must fail") + except TypeError as exc: + assert exc is error # unmodified exception + + def test_properties(self): + # Check that str and repr are sensible + func = dispatched_two_arg + assert str(func) == str(func._implementation) + repr_no_id = repr(func).split("at ")[0] + repr_no_id_impl = repr(func._implementation).split("at ")[0] + assert repr_no_id == repr_no_id_impl + + @pytest.mark.parametrize("func", [ + lambda x, y: 0, # no like argument + lambda like=None: 0, # not keyword only + lambda *, like=None, a=3: 0, # not last (not that it matters) + ]) + def test_bad_like_sig(self, func): + # We sanity check the signature, and these should fail. + with pytest.raises(RuntimeError): + array_function_dispatch()(func) + + def test_bad_like_passing(self): + # Cover internal sanity check for passing like as first positional arg + def func(*, like=None): + pass + + func_with_like = array_function_dispatch()(func) + with pytest.raises(TypeError): + func_with_like() + with pytest.raises(TypeError): + func_with_like(like=234) + + def test_too_many_args(self): + # Mainly a unit-test to increase coverage + objs = [] + for i in range(80): + class MyArr: + def __array_function__(self, *args, **kwargs): + return NotImplemented + + objs.append(MyArr()) + + def _dispatch(*args): + return args + + @array_function_dispatch(_dispatch) + def func(*args): + pass + + with pytest.raises(TypeError, match="maximum number"): + func(*objs) + + + +class TestNDArrayMethods: + + def test_repr(self): + # gh-12162: should still be defined even if __array_function__ doesn't + # implement np.array_repr() + + class MyArray(np.ndarray): + def __array_function__(*args, **kwargs): + return NotImplemented + + array = np.array(1).view(MyArray) + assert_equal(repr(array), 'MyArray(1)') + assert_equal(str(array), '1') + + +class TestNumPyFunctions: + + def test_set_module(self): + assert_equal(np.sum.__module__, 'numpy') + assert_equal(np.char.equal.__module__, 'numpy.char') + assert_equal(np.fft.fft.__module__, 'numpy.fft') + assert_equal(np.linalg.solve.__module__, 'numpy.linalg') + + def test_inspect_sum(self): + signature = inspect.signature(np.sum) + assert_('axis' in signature.parameters) + + def test_override_sum(self): + MyArray, implements = _new_duck_type_and_implements() + + @implements(np.sum) + def _(array): + return 'yes' + + assert_equal(np.sum(MyArray()), 'yes') + + def test_sum_on_mock_array(self): + + # We need a proxy for mocks because __array_function__ is only looked + # up in the class dict + class ArrayProxy: + def __init__(self, value): + self.value = value + def __array_function__(self, *args, **kwargs): + return self.value.__array_function__(*args, **kwargs) + def __array__(self, *args, **kwargs): + return self.value.__array__(*args, **kwargs) + + proxy = ArrayProxy(mock.Mock(spec=ArrayProxy)) + proxy.value.__array_function__.return_value = 1 + result = np.sum(proxy) + assert_equal(result, 1) + proxy.value.__array_function__.assert_called_once_with( + np.sum, (ArrayProxy,), (proxy,), {}) + proxy.value.__array__.assert_not_called() + + def test_sum_forwarding_implementation(self): + + class MyArray(np.ndarray): + + def sum(self, axis, out): + return 'summed' + + def __array_function__(self, func, types, args, kwargs): + return super().__array_function__(func, types, args, kwargs) + + # note: the internal implementation of np.sum() calls the .sum() method + array = np.array(1).view(MyArray) + assert_equal(np.sum(array), 'summed') + + +class TestArrayLike: + def setup_method(self): + class MyArray(): + def __init__(self, function=None): + self.function = function + + def __array_function__(self, func, types, args, kwargs): + assert func is getattr(np, func.__name__) + try: + my_func = getattr(self, func.__name__) + except AttributeError: + return NotImplemented + return my_func(*args, **kwargs) + + self.MyArray = MyArray + + class MyNoArrayFunctionArray(): + def __init__(self, function=None): + self.function = function + + self.MyNoArrayFunctionArray = MyNoArrayFunctionArray + + def add_method(self, name, arr_class, enable_value_error=False): + def _definition(*args, **kwargs): + # Check that `like=` isn't propagated downstream + assert 'like' not in kwargs + + if enable_value_error and 'value_error' in kwargs: + raise ValueError + + return arr_class(getattr(arr_class, name)) + setattr(arr_class, name, _definition) + + def func_args(*args, **kwargs): + return args, kwargs + + def test_array_like_not_implemented(self): + self.add_method('array', self.MyArray) + + ref = self.MyArray.array() + + with assert_raises_regex(TypeError, 'no implementation found'): + array_like = np.asarray(1, like=ref) + + _array_tests = [ + ('array', *func_args((1,))), + ('asarray', *func_args((1,))), + ('asanyarray', *func_args((1,))), + ('ascontiguousarray', *func_args((2, 3))), + ('asfortranarray', *func_args((2, 3))), + ('require', *func_args((np.arange(6).reshape(2, 3),), + requirements=['A', 'F'])), + ('empty', *func_args((1,))), + ('full', *func_args((1,), 2)), + ('ones', *func_args((1,))), + ('zeros', *func_args((1,))), + ('arange', *func_args(3)), + ('frombuffer', *func_args(b'\x00' * 8, dtype=int)), + ('fromiter', *func_args(range(3), dtype=int)), + ('fromstring', *func_args('1,2', dtype=int, sep=',')), + ('loadtxt', *func_args(lambda: StringIO('0 1\n2 3'))), + ('genfromtxt', *func_args(lambda: StringIO('1,2.1'), + dtype=[('int', 'i8'), ('float', 'f8')], + delimiter=',')), + ] + + @pytest.mark.parametrize('function, args, kwargs', _array_tests) + @pytest.mark.parametrize('numpy_ref', [True, False]) + def test_array_like(self, function, args, kwargs, numpy_ref): + self.add_method('array', self.MyArray) + self.add_method(function, self.MyArray) + np_func = getattr(np, function) + my_func = getattr(self.MyArray, function) + + if numpy_ref is True: + ref = np.array(1) + else: + ref = self.MyArray.array() + + like_args = tuple(a() if callable(a) else a for a in args) + array_like = np_func(*like_args, **kwargs, like=ref) + + if numpy_ref is True: + assert type(array_like) is np.ndarray + + np_args = tuple(a() if callable(a) else a for a in args) + np_arr = np_func(*np_args, **kwargs) + + # Special-case np.empty to ensure values match + if function == "empty": + np_arr.fill(1) + array_like.fill(1) + + assert_equal(array_like, np_arr) + else: + assert type(array_like) is self.MyArray + assert array_like.function is my_func + + @pytest.mark.parametrize('function, args, kwargs', _array_tests) + @pytest.mark.parametrize('ref', [1, [1], "MyNoArrayFunctionArray"]) + def test_no_array_function_like(self, function, args, kwargs, ref): + self.add_method('array', self.MyNoArrayFunctionArray) + self.add_method(function, self.MyNoArrayFunctionArray) + np_func = getattr(np, function) + + # Instantiate ref if it's the MyNoArrayFunctionArray class + if ref == "MyNoArrayFunctionArray": + ref = self.MyNoArrayFunctionArray.array() + + like_args = tuple(a() if callable(a) else a for a in args) + + with assert_raises_regex(TypeError, + 'The `like` argument must be an array-like that implements'): + np_func(*like_args, **kwargs, like=ref) + + @pytest.mark.parametrize('numpy_ref', [True, False]) + def test_array_like_fromfile(self, numpy_ref): + self.add_method('array', self.MyArray) + self.add_method("fromfile", self.MyArray) + + if numpy_ref is True: + ref = np.array(1) + else: + ref = self.MyArray.array() + + data = np.random.random(5) + + with tempfile.TemporaryDirectory() as tmpdir: + fname = os.path.join(tmpdir, "testfile") + data.tofile(fname) + + array_like = np.fromfile(fname, like=ref) + if numpy_ref is True: + assert type(array_like) is np.ndarray + np_res = np.fromfile(fname, like=ref) + assert_equal(np_res, data) + assert_equal(array_like, np_res) + else: + assert type(array_like) is self.MyArray + assert array_like.function is self.MyArray.fromfile + + def test_exception_handling(self): + self.add_method('array', self.MyArray, enable_value_error=True) + + ref = self.MyArray.array() + + with assert_raises(TypeError): + # Raises the error about `value_error` being invalid first + np.array(1, value_error=True, like=ref) + + @pytest.mark.parametrize('function, args, kwargs', _array_tests) + def test_like_as_none(self, function, args, kwargs): + self.add_method('array', self.MyArray) + self.add_method(function, self.MyArray) + np_func = getattr(np, function) + + like_args = tuple(a() if callable(a) else a for a in args) + # required for loadtxt and genfromtxt to init w/o error. + like_args_exp = tuple(a() if callable(a) else a for a in args) + + array_like = np_func(*like_args, **kwargs, like=None) + expected = np_func(*like_args_exp, **kwargs) + # Special-case np.empty to ensure values match + if function == "empty": + array_like.fill(1) + expected.fill(1) + assert_equal(array_like, expected) + + +def test_function_like(): + # We provide a `__get__` implementation, make sure it works + assert type(np.mean) is np._core._multiarray_umath._ArrayFunctionDispatcher + + class MyClass: + def __array__(self, dtype=None, copy=None): + # valid argument to mean: + return np.arange(3) + + func1 = staticmethod(np.mean) + func2 = np.mean + func3 = classmethod(np.mean) + + m = MyClass() + assert m.func1([10]) == 10 + assert m.func2() == 1 # mean of the arange + with pytest.raises(TypeError, match="unsupported operand type"): + # Tries to operate on the class + m.func3() + + # Manual binding also works (the above may shortcut): + bound = np.mean.__get__(m, MyClass) + assert bound() == 1 + + bound = np.mean.__get__(None, MyClass) # unbound actually + assert bound([10]) == 10 + + bound = np.mean.__get__(MyClass) # classmethod + with pytest.raises(TypeError, match="unsupported operand type"): + bound() diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_print.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_print.py new file mode 100644 index 0000000000000000000000000000000000000000..7f16449704a130a7df376f545fecfaf386cb4875 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_print.py @@ -0,0 +1,202 @@ +import sys + +import pytest + +import numpy as np +from numpy.testing import assert_, assert_equal, IS_MUSL +from numpy._core.tests._locales import CommaDecimalPointLocale + + +from io import StringIO + +_REF = {np.inf: 'inf', -np.inf: '-inf', np.nan: 'nan'} + + +@pytest.mark.parametrize('tp', [np.float32, np.double, np.longdouble]) +def test_float_types(tp): + """ Check formatting. + + This is only for the str function, and only for simple types. + The precision of np.float32 and np.longdouble aren't the same as the + python float precision. + + """ + for x in [0, 1, -1, 1e20]: + assert_equal(str(tp(x)), str(float(x)), + err_msg='Failed str formatting for type %s' % tp) + + if tp(1e16).itemsize > 4: + assert_equal(str(tp(1e16)), str(float('1e16')), + err_msg='Failed str formatting for type %s' % tp) + else: + ref = '1e+16' + assert_equal(str(tp(1e16)), ref, + err_msg='Failed str formatting for type %s' % tp) + + +@pytest.mark.parametrize('tp', [np.float32, np.double, np.longdouble]) +def test_nan_inf_float(tp): + """ Check formatting of nan & inf. + + This is only for the str function, and only for simple types. + The precision of np.float32 and np.longdouble aren't the same as the + python float precision. + + """ + for x in [np.inf, -np.inf, np.nan]: + assert_equal(str(tp(x)), _REF[x], + err_msg='Failed str formatting for type %s' % tp) + + +@pytest.mark.parametrize('tp', [np.complex64, np.cdouble, np.clongdouble]) +def test_complex_types(tp): + """Check formatting of complex types. + + This is only for the str function, and only for simple types. + The precision of np.float32 and np.longdouble aren't the same as the + python float precision. + + """ + for x in [0, 1, -1, 1e20]: + assert_equal(str(tp(x)), str(complex(x)), + err_msg='Failed str formatting for type %s' % tp) + assert_equal(str(tp(x*1j)), str(complex(x*1j)), + err_msg='Failed str formatting for type %s' % tp) + assert_equal(str(tp(x + x*1j)), str(complex(x + x*1j)), + err_msg='Failed str formatting for type %s' % tp) + + if tp(1e16).itemsize > 8: + assert_equal(str(tp(1e16)), str(complex(1e16)), + err_msg='Failed str formatting for type %s' % tp) + else: + ref = '(1e+16+0j)' + assert_equal(str(tp(1e16)), ref, + err_msg='Failed str formatting for type %s' % tp) + + +@pytest.mark.parametrize('dtype', [np.complex64, np.cdouble, np.clongdouble]) +def test_complex_inf_nan(dtype): + """Check inf/nan formatting of complex types.""" + TESTS = { + complex(np.inf, 0): "(inf+0j)", + complex(0, np.inf): "infj", + complex(-np.inf, 0): "(-inf+0j)", + complex(0, -np.inf): "-infj", + complex(np.inf, 1): "(inf+1j)", + complex(1, np.inf): "(1+infj)", + complex(-np.inf, 1): "(-inf+1j)", + complex(1, -np.inf): "(1-infj)", + complex(np.nan, 0): "(nan+0j)", + complex(0, np.nan): "nanj", + complex(-np.nan, 0): "(nan+0j)", + complex(0, -np.nan): "nanj", + complex(np.nan, 1): "(nan+1j)", + complex(1, np.nan): "(1+nanj)", + complex(-np.nan, 1): "(nan+1j)", + complex(1, -np.nan): "(1+nanj)", + } + for c, s in TESTS.items(): + assert_equal(str(dtype(c)), s) + + +# print tests +def _test_redirected_print(x, tp, ref=None): + file = StringIO() + file_tp = StringIO() + stdout = sys.stdout + try: + sys.stdout = file_tp + print(tp(x)) + sys.stdout = file + if ref: + print(ref) + else: + print(x) + finally: + sys.stdout = stdout + + assert_equal(file.getvalue(), file_tp.getvalue(), + err_msg='print failed for type%s' % tp) + + +@pytest.mark.parametrize('tp', [np.float32, np.double, np.longdouble]) +def test_float_type_print(tp): + """Check formatting when using print """ + for x in [0, 1, -1, 1e20]: + _test_redirected_print(float(x), tp) + + for x in [np.inf, -np.inf, np.nan]: + _test_redirected_print(float(x), tp, _REF[x]) + + if tp(1e16).itemsize > 4: + _test_redirected_print(float(1e16), tp) + else: + ref = '1e+16' + _test_redirected_print(float(1e16), tp, ref) + + +@pytest.mark.parametrize('tp', [np.complex64, np.cdouble, np.clongdouble]) +def test_complex_type_print(tp): + """Check formatting when using print """ + # We do not create complex with inf/nan directly because the feature is + # missing in python < 2.6 + for x in [0, 1, -1, 1e20]: + _test_redirected_print(complex(x), tp) + + if tp(1e16).itemsize > 8: + _test_redirected_print(complex(1e16), tp) + else: + ref = '(1e+16+0j)' + _test_redirected_print(complex(1e16), tp, ref) + + _test_redirected_print(complex(np.inf, 1), tp, '(inf+1j)') + _test_redirected_print(complex(-np.inf, 1), tp, '(-inf+1j)') + _test_redirected_print(complex(-np.nan, 1), tp, '(nan+1j)') + + +def test_scalar_format(): + """Test the str.format method with NumPy scalar types""" + tests = [('{0}', True, np.bool), + ('{0}', False, np.bool), + ('{0:d}', 130, np.uint8), + ('{0:d}', 50000, np.uint16), + ('{0:d}', 3000000000, np.uint32), + ('{0:d}', 15000000000000000000, np.uint64), + ('{0:d}', -120, np.int8), + ('{0:d}', -30000, np.int16), + ('{0:d}', -2000000000, np.int32), + ('{0:d}', -7000000000000000000, np.int64), + ('{0:g}', 1.5, np.float16), + ('{0:g}', 1.5, np.float32), + ('{0:g}', 1.5, np.float64), + ('{0:g}', 1.5, np.longdouble), + ('{0:g}', 1.5+0.5j, np.complex64), + ('{0:g}', 1.5+0.5j, np.complex128), + ('{0:g}', 1.5+0.5j, np.clongdouble)] + + for (fmat, val, valtype) in tests: + try: + assert_equal(fmat.format(val), fmat.format(valtype(val)), + "failed with val %s, type %s" % (val, valtype)) + except ValueError as e: + assert_(False, + "format raised exception (fmt='%s', val=%s, type=%s, exc='%s')" % + (fmat, repr(val), repr(valtype), str(e))) + + +# +# Locale tests: scalar types formatting should be independent of the locale +# + +class TestCommaDecimalPointLocale(CommaDecimalPointLocale): + + def test_locale_single(self): + assert_equal(str(np.float32(1.2)), str(float(1.2))) + + def test_locale_double(self): + assert_equal(str(np.double(1.2)), str(float(1.2))) + + @pytest.mark.skipif(IS_MUSL, + reason="test flaky on musllinux") + def test_locale_longdouble(self): + assert_equal(str(np.longdouble('1.2')), str(float(1.2))) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_protocols.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_protocols.py new file mode 100644 index 0000000000000000000000000000000000000000..7cab1223bfe1728f7e8bd5936c02f9564ede0703 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_protocols.py @@ -0,0 +1,45 @@ +import pytest +import warnings +import numpy as np + + +@pytest.mark.filterwarnings("error") +def test_getattr_warning(): + # issue gh-14735: make sure we clear only getattr errors, and let warnings + # through + class Wrapper: + def __init__(self, array): + self.array = array + + def __len__(self): + return len(self.array) + + def __getitem__(self, item): + return type(self)(self.array[item]) + + def __getattr__(self, name): + if name.startswith("__array_"): + warnings.warn("object got converted", UserWarning, stacklevel=1) + + return getattr(self.array, name) + + def __repr__(self): + return "".format(self=self) + + array = Wrapper(np.arange(10)) + with pytest.raises(UserWarning, match="object got converted"): + np.asarray(array) + + +def test_array_called(): + class Wrapper: + val = '0' * 100 + + def __array__(self, result=None, copy=None): + return np.array([self.val], dtype=object) + + + wrapped = Wrapper() + arr = np.array(wrapped, dtype=str) + assert arr.dtype == 'U100' + assert arr[0] == Wrapper.val diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_records.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_records.py new file mode 100644 index 0000000000000000000000000000000000000000..975bb322f87c1c95f1ef488209d492ab85ee55e2 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_records.py @@ -0,0 +1,540 @@ +import collections.abc +import textwrap +from io import BytesIO +from os import path +from pathlib import Path +import pickle + +import pytest + +import numpy as np +from numpy.testing import ( + assert_, assert_equal, assert_array_equal, assert_array_almost_equal, + assert_raises, temppath, + ) + + +class TestFromrecords: + def test_fromrecords(self): + r = np.rec.fromrecords([[456, 'dbe', 1.2], [2, 'de', 1.3]], + names='col1,col2,col3') + assert_equal(r[0].item(), (456, 'dbe', 1.2)) + assert_equal(r['col1'].dtype.kind, 'i') + assert_equal(r['col2'].dtype.kind, 'U') + assert_equal(r['col2'].dtype.itemsize, 12) + assert_equal(r['col3'].dtype.kind, 'f') + + def test_fromrecords_0len(self): + """ Verify fromrecords works with a 0-length input """ + dtype = [('a', float), ('b', float)] + r = np.rec.fromrecords([], dtype=dtype) + assert_equal(r.shape, (0,)) + + def test_fromrecords_2d(self): + data = [ + [(1, 2), (3, 4), (5, 6)], + [(6, 5), (4, 3), (2, 1)] + ] + expected_a = [[1, 3, 5], [6, 4, 2]] + expected_b = [[2, 4, 6], [5, 3, 1]] + + # try with dtype + r1 = np.rec.fromrecords(data, dtype=[('a', int), ('b', int)]) + assert_equal(r1['a'], expected_a) + assert_equal(r1['b'], expected_b) + + # try with names + r2 = np.rec.fromrecords(data, names=['a', 'b']) + assert_equal(r2['a'], expected_a) + assert_equal(r2['b'], expected_b) + + assert_equal(r1, r2) + + def test_method_array(self): + r = np.rec.array( + b'abcdefg' * 100, formats='i2,S3,i4', shape=3, byteorder='big' + ) + assert_equal(r[1].item(), (25444, b'efg', 1633837924)) + + def test_method_array2(self): + r = np.rec.array( + [ + (1, 11, 'a'), (2, 22, 'b'), (3, 33, 'c'), (4, 44, 'd'), + (5, 55, 'ex'), (6, 66, 'f'), (7, 77, 'g') + ], + formats='u1,f4,S1' + ) + assert_equal(r[1].item(), (2, 22.0, b'b')) + + def test_recarray_slices(self): + r = np.rec.array( + [ + (1, 11, 'a'), (2, 22, 'b'), (3, 33, 'c'), (4, 44, 'd'), + (5, 55, 'ex'), (6, 66, 'f'), (7, 77, 'g') + ], + formats='u1,f4,S1' + ) + assert_equal(r[1::2][1].item(), (4, 44.0, b'd')) + + def test_recarray_fromarrays(self): + x1 = np.array([1, 2, 3, 4]) + x2 = np.array(['a', 'dd', 'xyz', '12']) + x3 = np.array([1.1, 2, 3, 4]) + r = np.rec.fromarrays([x1, x2, x3], names='a,b,c') + assert_equal(r[1].item(), (2, 'dd', 2.0)) + x1[1] = 34 + assert_equal(r.a, np.array([1, 2, 3, 4])) + + def test_recarray_fromfile(self): + data_dir = path.join(path.dirname(__file__), 'data') + filename = path.join(data_dir, 'recarray_from_file.fits') + fd = open(filename, 'rb') + fd.seek(2880 * 2) + r1 = np.rec.fromfile(fd, formats='f8,i4,S5', shape=3, byteorder='big') + fd.seek(2880 * 2) + r2 = np.rec.array(fd, formats='f8,i4,S5', shape=3, byteorder='big') + fd.seek(2880 * 2) + bytes_array = BytesIO() + bytes_array.write(fd.read()) + bytes_array.seek(0) + r3 = np.rec.fromfile( + bytes_array, formats='f8,i4,S5', shape=3, byteorder='big' + ) + fd.close() + assert_equal(r1, r2) + assert_equal(r2, r3) + + def test_recarray_from_obj(self): + count = 10 + a = np.zeros(count, dtype='O') + b = np.zeros(count, dtype='f8') + c = np.zeros(count, dtype='f8') + for i in range(len(a)): + a[i] = list(range(1, 10)) + + mine = np.rec.fromarrays([a, b, c], names='date,data1,data2') + for i in range(len(a)): + assert_((mine.date[i] == list(range(1, 10)))) + assert_((mine.data1[i] == 0.0)) + assert_((mine.data2[i] == 0.0)) + + def test_recarray_repr(self): + a = np.array([(1, 0.1), (2, 0.2)], + dtype=[('foo', ' 2) & (a < 6)) + xb = np.where((b > 2) & (b < 6)) + ya = ((a > 2) & (a < 6)) + yb = ((b > 2) & (b < 6)) + assert_array_almost_equal(xa, ya.nonzero()) + assert_array_almost_equal(xb, yb.nonzero()) + assert_(np.all(a[ya] > 0.5)) + assert_(np.all(b[yb] > 0.5)) + + def test_endian_where(self): + # GitHub issue #369 + net = np.zeros(3, dtype='>f4') + net[1] = 0.00458849 + net[2] = 0.605202 + max_net = net.max() + test = np.where(net <= 0., max_net, net) + correct = np.array([ 0.60520202, 0.00458849, 0.60520202]) + assert_array_almost_equal(test, correct) + + def test_endian_recarray(self): + # Ticket #2185 + dt = np.dtype([ + ('head', '>u4'), + ('data', '>u4', 2), + ]) + buf = np.recarray(1, dtype=dt) + buf[0]['head'] = 1 + buf[0]['data'][:] = [1, 1] + + h = buf[0]['head'] + d = buf[0]['data'][0] + buf[0]['head'] = h + buf[0]['data'][0] = d + assert_(buf[0]['head'] == 1) + + def test_mem_dot(self): + # Ticket #106 + x = np.random.randn(0, 1) + y = np.random.randn(10, 1) + # Dummy array to detect bad memory access: + _z = np.ones(10) + _dummy = np.empty((0, 10)) + z = np.lib.stride_tricks.as_strided(_z, _dummy.shape, _dummy.strides) + np.dot(x, np.transpose(y), out=z) + assert_equal(_z, np.ones(10)) + # Do the same for the built-in dot: + np._core.multiarray.dot(x, np.transpose(y), out=z) + assert_equal(_z, np.ones(10)) + + def test_arange_endian(self): + # Ticket #111 + ref = np.arange(10) + x = np.arange(10, dtype=' 1 and x['two'] > 2) + + def test_method_args(self): + # Make sure methods and functions have same default axis + # keyword and arguments + funcs1 = ['argmax', 'argmin', 'sum', 'any', 'all', 'cumsum', + 'cumprod', 'prod', 'std', 'var', 'mean', + 'round', 'min', 'max', 'argsort', 'sort'] + funcs2 = ['compress', 'take', 'repeat'] + + for func in funcs1: + arr = np.random.rand(8, 7) + arr2 = arr.copy() + res1 = getattr(arr, func)() + res2 = getattr(np, func)(arr2) + if res1 is None: + res1 = arr + + if res1.dtype.kind in 'uib': + assert_((res1 == res2).all(), func) + else: + assert_(abs(res1-res2).max() < 1e-8, func) + + for func in funcs2: + arr1 = np.random.rand(8, 7) + arr2 = np.random.rand(8, 7) + res1 = None + if func == 'compress': + arr1 = arr1.ravel() + res1 = getattr(arr2, func)(arr1) + else: + arr2 = (15*arr2).astype(int).ravel() + if res1 is None: + res1 = getattr(arr1, func)(arr2) + res2 = getattr(np, func)(arr1, arr2) + assert_(abs(res1-res2).max() < 1e-8, func) + + def test_mem_lexsort_strings(self): + # Ticket #298 + lst = ['abc', 'cde', 'fgh'] + np.lexsort((lst,)) + + def test_fancy_index(self): + # Ticket #302 + x = np.array([1, 2])[np.array([0])] + assert_equal(x.shape, (1,)) + + def test_recarray_copy(self): + # Ticket #312 + dt = [('x', np.int16), ('y', np.float64)] + ra = np.array([(1, 2.3)], dtype=dt) + rb = np.rec.array(ra, dtype=dt) + rb['x'] = 2. + assert_(ra['x'] != rb['x']) + + def test_rec_fromarray(self): + # Ticket #322 + x1 = np.array([[1, 2], [3, 4], [5, 6]]) + x2 = np.array(['a', 'dd', 'xyz']) + x3 = np.array([1.1, 2, 3]) + np.rec.fromarrays([x1, x2, x3], formats="(2,)i4,S3,f8") + + def test_object_array_assign(self): + x = np.empty((2, 2), object) + x.flat[2] = (1, 2, 3) + assert_equal(x.flat[2], (1, 2, 3)) + + def test_ndmin_float64(self): + # Ticket #324 + x = np.array([1, 2, 3], dtype=np.float64) + assert_equal(np.array(x, dtype=np.float32, ndmin=2).ndim, 2) + assert_equal(np.array(x, dtype=np.float64, ndmin=2).ndim, 2) + + def test_ndmin_order(self): + # Issue #465 and related checks + assert_(np.array([1, 2], order='C', ndmin=3).flags.c_contiguous) + assert_(np.array([1, 2], order='F', ndmin=3).flags.f_contiguous) + assert_(np.array(np.ones((2, 2), order='F'), ndmin=3).flags.f_contiguous) + assert_(np.array(np.ones((2, 2), order='C'), ndmin=3).flags.c_contiguous) + + def test_mem_axis_minimization(self): + # Ticket #327 + data = np.arange(5) + data = np.add.outer(data, data) + + def test_mem_float_imag(self): + # Ticket #330 + np.float64(1.0).imag + + def test_dtype_tuple(self): + # Ticket #334 + assert_(np.dtype('i4') == np.dtype(('i4', ()))) + + def test_dtype_posttuple(self): + # Ticket #335 + np.dtype([('col1', '()i4')]) + + def test_numeric_carray_compare(self): + # Ticket #341 + assert_equal(np.array(['X'], 'c'), b'X') + + def test_string_array_size(self): + # Ticket #342 + assert_raises(ValueError, + np.array, [['X'], ['X', 'X', 'X']], '|S1') + + def test_dtype_repr(self): + # Ticket #344 + dt1 = np.dtype(('uint32', 2)) + dt2 = np.dtype(('uint32', (2,))) + assert_equal(dt1.__repr__(), dt2.__repr__()) + + def test_reshape_order(self): + # Make sure reshape order works. + a = np.arange(6).reshape(2, 3, order='F') + assert_equal(a, [[0, 2, 4], [1, 3, 5]]) + a = np.array([[1, 2], [3, 4], [5, 6], [7, 8]]) + b = a[:, 1] + assert_equal(b.reshape(2, 2, order='F'), [[2, 6], [4, 8]]) + + def test_reshape_zero_strides(self): + # Issue #380, test reshaping of zero strided arrays + a = np.ones(1) + a = np.lib.stride_tricks.as_strided(a, shape=(5,), strides=(0,)) + assert_(a.reshape(5, 1).strides[0] == 0) + + def test_reshape_zero_size(self): + # GitHub Issue #2700, setting shape failed for 0-sized arrays + a = np.ones((0, 2)) + a.shape = (-1, 2) + + def test_reshape_trailing_ones_strides(self): + # GitHub issue gh-2949, bad strides for trailing ones of new shape + a = np.zeros(12, dtype=np.int32)[::2] # not contiguous + strides_c = (16, 8, 8, 8) + strides_f = (8, 24, 48, 48) + assert_equal(a.reshape(3, 2, 1, 1).strides, strides_c) + assert_equal(a.reshape(3, 2, 1, 1, order='F').strides, strides_f) + assert_equal(np.array(0, dtype=np.int32).reshape(1, 1).strides, (4, 4)) + + def test_repeat_discont(self): + # Ticket #352 + a = np.arange(12).reshape(4, 3)[:, 2] + assert_equal(a.repeat(3), [2, 2, 2, 5, 5, 5, 8, 8, 8, 11, 11, 11]) + + def test_array_index(self): + # Make sure optimization is not called in this case. + a = np.array([1, 2, 3]) + a2 = np.array([[1, 2, 3]]) + assert_equal(a[np.where(a == 3)], a2[np.where(a2 == 3)]) + + def test_object_argmax(self): + a = np.array([1, 2, 3], dtype=object) + assert_(a.argmax() == 2) + + def test_recarray_fields(self): + # Ticket #372 + dt0 = np.dtype([('f0', 'i4'), ('f1', 'i4')]) + dt1 = np.dtype([('f0', 'i8'), ('f1', 'i8')]) + for a in [np.array([(1, 2), (3, 4)], "i4,i4"), + np.rec.array([(1, 2), (3, 4)], "i4,i4"), + np.rec.array([(1, 2), (3, 4)]), + np.rec.fromarrays([(1, 2), (3, 4)], "i4,i4"), + np.rec.fromarrays([(1, 2), (3, 4)])]: + assert_(a.dtype in [dt0, dt1]) + + def test_random_shuffle(self): + # Ticket #374 + a = np.arange(5).reshape((5, 1)) + b = a.copy() + np.random.shuffle(b) + assert_equal(np.sort(b, axis=0), a) + + def test_refcount_vdot(self): + # Changeset #3443 + _assert_valid_refcount(np.vdot) + + def test_startswith(self): + ca = np.char.array(['Hi', 'There']) + assert_equal(ca.startswith('H'), [True, False]) + + def test_noncommutative_reduce_accumulate(self): + # Ticket #413 + tosubtract = np.arange(5) + todivide = np.array([2.0, 0.5, 0.25]) + assert_equal(np.subtract.reduce(tosubtract), -10) + assert_equal(np.divide.reduce(todivide), 16.0) + assert_array_equal(np.subtract.accumulate(tosubtract), + np.array([0, -1, -3, -6, -10])) + assert_array_equal(np.divide.accumulate(todivide), + np.array([2., 4., 16.])) + + def test_convolve_empty(self): + # Convolve should raise an error for empty input array. + assert_raises(ValueError, np.convolve, [], [1]) + assert_raises(ValueError, np.convolve, [1], []) + + def test_multidim_byteswap(self): + # Ticket #449 + r = np.array([(1, (0, 1, 2))], dtype="i2,3i2") + assert_array_equal(r.byteswap(), + np.array([(256, (0, 256, 512))], r.dtype)) + + def test_string_NULL(self): + # Changeset 3557 + assert_equal(np.array("a\x00\x0b\x0c\x00").item(), + 'a\x00\x0b\x0c') + + def test_junk_in_string_fields_of_recarray(self): + # Ticket #483 + r = np.array([[b'abc']], dtype=[('var1', '|S20')]) + assert_(asbytes(r['var1'][0][0]) == b'abc') + + def test_take_output(self): + # Ensure that 'take' honours output parameter. + x = np.arange(12).reshape((3, 4)) + a = np.take(x, [0, 2], axis=1) + b = np.zeros_like(a) + np.take(x, [0, 2], axis=1, out=b) + assert_array_equal(a, b) + + def test_take_object_fail(self): + # Issue gh-3001 + d = 123. + a = np.array([d, 1], dtype=object) + if HAS_REFCOUNT: + ref_d = sys.getrefcount(d) + try: + a.take([0, 100]) + except IndexError: + pass + if HAS_REFCOUNT: + assert_(ref_d == sys.getrefcount(d)) + + def test_array_str_64bit(self): + # Ticket #501 + s = np.array([1, np.nan], dtype=np.float64) + with np.errstate(all='raise'): + np.array_str(s) # Should succeed + + def test_frompyfunc_endian(self): + # Ticket #503 + from math import radians + uradians = np.frompyfunc(radians, 1, 1) + big_endian = np.array([83.4, 83.5], dtype='>f8') + little_endian = np.array([83.4, 83.5], dtype=' object + # casting succeeds + def rs(): + x = np.ones([484, 286]) + y = np.zeros([484, 286]) + x |= y + + assert_raises(TypeError, rs) + + def test_unicode_scalar(self): + # Ticket #600 + x = np.array(["DROND", "DROND1"], dtype="U6") + el = x[1] + for proto in range(2, pickle.HIGHEST_PROTOCOL + 1): + new = pickle.loads(pickle.dumps(el, protocol=proto)) + assert_equal(new, el) + + def test_arange_non_native_dtype(self): + # Ticket #616 + for T in ('>f4', ' 0)] = v + + assert_raises(IndexError, ia, x, s, np.zeros(9, dtype=float)) + assert_raises(IndexError, ia, x, s, np.zeros(11, dtype=float)) + + # Old special case (different code path): + assert_raises(ValueError, ia, x.flat, s, np.zeros(9, dtype=float)) + assert_raises(ValueError, ia, x.flat, s, np.zeros(11, dtype=float)) + + def test_mem_scalar_indexing(self): + # Ticket #603 + x = np.array([0], dtype=float) + index = np.array(0, dtype=np.int32) + x[index] + + def test_binary_repr_0_width(self): + assert_equal(np.binary_repr(0, width=3), '000') + + def test_fromstring(self): + assert_equal(np.fromstring("12:09:09", dtype=int, sep=":"), + [12, 9, 9]) + + def test_searchsorted_variable_length(self): + x = np.array(['a', 'aa', 'b']) + y = np.array(['d', 'e']) + assert_equal(x.searchsorted(y), [3, 3]) + + def test_string_argsort_with_zeros(self): + # Check argsort for strings containing zeros. + x = np.frombuffer(b"\x00\x02\x00\x01", dtype="|S2") + assert_array_equal(x.argsort(kind='m'), np.array([1, 0])) + assert_array_equal(x.argsort(kind='q'), np.array([1, 0])) + + def test_string_sort_with_zeros(self): + # Check sort for strings containing zeros. + x = np.frombuffer(b"\x00\x02\x00\x01", dtype="|S2") + y = np.frombuffer(b"\x00\x01\x00\x02", dtype="|S2") + assert_array_equal(np.sort(x, kind="q"), y) + + def test_copy_detection_zero_dim(self): + # Ticket #658 + np.indices((0, 3, 4)).T.reshape(-1, 3) + + def test_flat_byteorder(self): + # Ticket #657 + x = np.arange(10) + assert_array_equal(x.astype('>i4'), x.astype('i4').flat[:], x.astype('i4')): + x = np.array([-1, 0, 1], dtype=dt) + assert_equal(x.flat[0].dtype, x[0].dtype) + + def test_copy_detection_corner_case(self): + # Ticket #658 + np.indices((0, 3, 4)).T.reshape(-1, 3) + + def test_object_array_refcounting(self): + # Ticket #633 + if not hasattr(sys, 'getrefcount'): + return + + # NB. this is probably CPython-specific + + cnt = sys.getrefcount + + a = object() + b = object() + c = object() + + cnt0_a = cnt(a) + cnt0_b = cnt(b) + cnt0_c = cnt(c) + + # -- 0d -> 1-d broadcast slice assignment + + arr = np.zeros(5, dtype=np.object_) + + arr[:] = a + assert_equal(cnt(a), cnt0_a + 5) + + arr[:] = b + assert_equal(cnt(a), cnt0_a) + assert_equal(cnt(b), cnt0_b + 5) + + arr[:2] = c + assert_equal(cnt(b), cnt0_b + 3) + assert_equal(cnt(c), cnt0_c + 2) + + del arr + + # -- 1-d -> 2-d broadcast slice assignment + + arr = np.zeros((5, 2), dtype=np.object_) + arr0 = np.zeros(2, dtype=np.object_) + + arr0[0] = a + assert_(cnt(a) == cnt0_a + 1) + arr0[1] = b + assert_(cnt(b) == cnt0_b + 1) + + arr[:, :] = arr0 + assert_(cnt(a) == cnt0_a + 6) + assert_(cnt(b) == cnt0_b + 6) + + arr[:, 0] = None + assert_(cnt(a) == cnt0_a + 1) + + del arr, arr0 + + # -- 2-d copying + flattening + + arr = np.zeros((5, 2), dtype=np.object_) + + arr[:, 0] = a + arr[:, 1] = b + assert_(cnt(a) == cnt0_a + 5) + assert_(cnt(b) == cnt0_b + 5) + + arr2 = arr.copy() + assert_(cnt(a) == cnt0_a + 10) + assert_(cnt(b) == cnt0_b + 10) + + arr2 = arr[:, 0].copy() + assert_(cnt(a) == cnt0_a + 10) + assert_(cnt(b) == cnt0_b + 5) + + arr2 = arr.flatten() + assert_(cnt(a) == cnt0_a + 10) + assert_(cnt(b) == cnt0_b + 10) + + del arr, arr2 + + # -- concatenate, repeat, take, choose + + arr1 = np.zeros((5, 1), dtype=np.object_) + arr2 = np.zeros((5, 1), dtype=np.object_) + + arr1[...] = a + arr2[...] = b + assert_(cnt(a) == cnt0_a + 5) + assert_(cnt(b) == cnt0_b + 5) + + tmp = np.concatenate((arr1, arr2)) + assert_(cnt(a) == cnt0_a + 5 + 5) + assert_(cnt(b) == cnt0_b + 5 + 5) + + tmp = arr1.repeat(3, axis=0) + assert_(cnt(a) == cnt0_a + 5 + 3*5) + + tmp = arr1.take([1, 2, 3], axis=0) + assert_(cnt(a) == cnt0_a + 5 + 3) + + x = np.array([[0], [1], [0], [1], [1]], int) + tmp = x.choose(arr1, arr2) + assert_(cnt(a) == cnt0_a + 5 + 2) + assert_(cnt(b) == cnt0_b + 5 + 3) + + del tmp # Avoid pyflakes unused variable warning + + def test_mem_custom_float_to_array(self): + # Ticket 702 + class MyFloat: + def __float__(self): + return 1.0 + + tmp = np.atleast_1d([MyFloat()]) + tmp.astype(float) # Should succeed + + def test_object_array_refcount_self_assign(self): + # Ticket #711 + class VictimObject: + deleted = False + + def __del__(self): + self.deleted = True + + d = VictimObject() + arr = np.zeros(5, dtype=np.object_) + arr[:] = d + del d + arr[:] = arr # refcount of 'd' might hit zero here + assert_(not arr[0].deleted) + arr[:] = arr # trying to induce a segfault by doing it again... + assert_(not arr[0].deleted) + + def test_mem_fromiter_invalid_dtype_string(self): + x = [1, 2, 3] + assert_raises(ValueError, + np.fromiter, [xi for xi in x], dtype='S') + + def test_reduce_big_object_array(self): + # Ticket #713 + oldsize = np.setbufsize(10*16) + a = np.array([None]*161, object) + assert_(not np.any(a)) + np.setbufsize(oldsize) + + def test_mem_0d_array_index(self): + # Ticket #714 + np.zeros(10)[np.array(0)] + + def test_nonnative_endian_fill(self): + # Non-native endian arrays were incorrectly filled with scalars + # before r5034. + if sys.byteorder == 'little': + dtype = np.dtype('>i4') + else: + dtype = np.dtype('data contains non-zero floats + x = np.array([123456789e199], dtype=np.float64) + if IS_PYPY: + x.resize((m, 0), refcheck=False) + else: + x.resize((m, 0)) + y = np.array([123456789e199], dtype=np.float64) + if IS_PYPY: + y.resize((0, n), refcheck=False) + else: + y.resize((0, n)) + + # `dot` should just return zero (m, n) matrix + z = np.dot(x, y) + assert_(np.all(z == 0)) + assert_(z.shape == (m, n)) + + def test_zeros(self): + # Regression test for #1061. + # Set a size which cannot fit into a 64 bits signed integer + sz = 2 ** 64 + with assert_raises_regex(ValueError, + 'Maximum allowed dimension exceeded'): + np.empty(sz) + + def test_huge_arange(self): + # Regression test for #1062. + # Set a size which cannot fit into a 64 bits signed integer + sz = 2 ** 64 + with assert_raises_regex(ValueError, + 'Maximum allowed size exceeded'): + np.arange(sz) + assert_(np.size == sz) + + def test_fromiter_bytes(self): + # Ticket #1058 + a = np.fromiter(list(range(10)), dtype='b') + b = np.fromiter(list(range(10)), dtype='B') + assert_(np.all(a == np.array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]))) + assert_(np.all(b == np.array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]))) + + def test_array_from_sequence_scalar_array(self): + # Ticket #1078: segfaults when creating an array with a sequence of + # 0d arrays. + a = np.array((np.ones(2), np.array(2)), dtype=object) + assert_equal(a.shape, (2,)) + assert_equal(a.dtype, np.dtype(object)) + assert_equal(a[0], np.ones(2)) + assert_equal(a[1], np.array(2)) + + a = np.array(((1,), np.array(1)), dtype=object) + assert_equal(a.shape, (2,)) + assert_equal(a.dtype, np.dtype(object)) + assert_equal(a[0], (1,)) + assert_equal(a[1], np.array(1)) + + def test_array_from_sequence_scalar_array2(self): + # Ticket #1081: weird array with strange input... + t = np.array([np.array([]), np.array(0, object)], dtype=object) + assert_equal(t.shape, (2,)) + assert_equal(t.dtype, np.dtype(object)) + + def test_array_too_big(self): + # Ticket #1080. + assert_raises(ValueError, np.zeros, [975]*7, np.int8) + assert_raises(ValueError, np.zeros, [26244]*5, np.int8) + + def test_dtype_keyerrors_(self): + # Ticket #1106. + dt = np.dtype([('f1', np.uint)]) + assert_raises(KeyError, dt.__getitem__, "f2") + assert_raises(IndexError, dt.__getitem__, 1) + assert_raises(TypeError, dt.__getitem__, 0.0) + + def test_lexsort_buffer_length(self): + # Ticket #1217, don't segfault. + a = np.ones(100, dtype=np.int8) + b = np.ones(100, dtype=np.int32) + i = np.lexsort((a[::-1], b)) + assert_equal(i, np.arange(100, dtype=int)) + + def test_object_array_to_fixed_string(self): + # Ticket #1235. + a = np.array(['abcdefgh', 'ijklmnop'], dtype=np.object_) + b = np.array(a, dtype=(np.str_, 8)) + assert_equal(a, b) + c = np.array(a, dtype=(np.str_, 5)) + assert_equal(c, np.array(['abcde', 'ijklm'])) + d = np.array(a, dtype=(np.str_, 12)) + assert_equal(a, d) + e = np.empty((2, ), dtype=(np.str_, 8)) + e[:] = a[:] + assert_equal(a, e) + + def test_unicode_to_string_cast(self): + # Ticket #1240. + a = np.array([['abc', '\u03a3'], + ['asdf', 'erw']], + dtype='U') + assert_raises(UnicodeEncodeError, np.array, a, 'S4') + + def test_unicode_to_string_cast_error(self): + # gh-15790 + a = np.array(['\x80'] * 129, dtype='U3') + assert_raises(UnicodeEncodeError, np.array, a, 'S') + b = a.reshape(3, 43)[:-1, :-1] + assert_raises(UnicodeEncodeError, np.array, b, 'S') + + def test_mixed_string_byte_array_creation(self): + a = np.array(['1234', b'123']) + assert_(a.itemsize == 16) + a = np.array([b'123', '1234']) + assert_(a.itemsize == 16) + a = np.array(['1234', b'123', '12345']) + assert_(a.itemsize == 20) + a = np.array([b'123', '1234', b'12345']) + assert_(a.itemsize == 20) + a = np.array([b'123', '1234', b'1234']) + assert_(a.itemsize == 16) + + def test_misaligned_objects_segfault(self): + # Ticket #1198 and #1267 + a1 = np.zeros((10,), dtype='O,c') + a2 = np.array(['a', 'b', 'c', 'd', 'e', 'f', 'g', 'h', 'i', 'j'], 'S10') + a1['f0'] = a2 + repr(a1) + np.argmax(a1['f0']) + a1['f0'][1] = "FOO" + a1['f0'] = "FOO" + np.array(a1['f0'], dtype='S') + np.nonzero(a1['f0']) + a1.sort() + copy.deepcopy(a1) + + def test_misaligned_scalars_segfault(self): + # Ticket #1267 + s1 = np.array(('a', 'Foo'), dtype='c,O') + s2 = np.array(('b', 'Bar'), dtype='c,O') + s1['f1'] = s2['f1'] + s1['f1'] = 'Baz' + + def test_misaligned_dot_product_objects(self): + # Ticket #1267 + # This didn't require a fix, but it's worth testing anyway, because + # it may fail if .dot stops enforcing the arrays to be BEHAVED + a = np.array([[(1, 'a'), (0, 'a')], [(0, 'a'), (1, 'a')]], dtype='O,c') + b = np.array([[(4, 'a'), (1, 'a')], [(2, 'a'), (2, 'a')]], dtype='O,c') + np.dot(a['f0'], b['f0']) + + def test_byteswap_complex_scalar(self): + # Ticket #1259 and gh-441 + for dtype in [np.dtype('<'+t) for t in np.typecodes['Complex']]: + z = np.array([2.2-1.1j], dtype) + x = z[0] # always native-endian + y = x.byteswap() + if x.dtype.byteorder == z.dtype.byteorder: + # little-endian machine + assert_equal(x, np.frombuffer(y.tobytes(), dtype=dtype.newbyteorder())) + else: + # big-endian machine + assert_equal(x, np.frombuffer(y.tobytes(), dtype=dtype)) + # double check real and imaginary parts: + assert_equal(x.real, y.real.byteswap()) + assert_equal(x.imag, y.imag.byteswap()) + + def test_structured_arrays_with_objects1(self): + # Ticket #1299 + stra = 'aaaa' + strb = 'bbbb' + x = np.array([[(0, stra), (1, strb)]], 'i8,O') + x[x.nonzero()] = x.ravel()[:1] + assert_(x[0, 1] == x[0, 0]) + + @pytest.mark.skipif( + sys.version_info >= (3, 12), + reason="Python 3.12 has immortal refcounts, this test no longer works." + ) + @pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") + def test_structured_arrays_with_objects2(self): + # Ticket #1299 second test + stra = 'aaaa' + strb = 'bbbb' + numb = sys.getrefcount(strb) + numa = sys.getrefcount(stra) + x = np.array([[(0, stra), (1, strb)]], 'i8,O') + x[x.nonzero()] = x.ravel()[:1] + assert_(sys.getrefcount(strb) == numb) + assert_(sys.getrefcount(stra) == numa + 2) + + def test_duplicate_title_and_name(self): + # Ticket #1254 + dtspec = [(('a', 'a'), 'i'), ('b', 'i')] + assert_raises(ValueError, np.dtype, dtspec) + + def test_signed_integer_division_overflow(self): + # Ticket #1317. + def test_type(t): + min = np.array([np.iinfo(t).min]) + min //= -1 + + with np.errstate(over="ignore"): + for t in (np.int8, np.int16, np.int32, np.int64, int): + test_type(t) + + def test_buffer_hashlib(self): + from hashlib import sha256 + + x = np.array([1, 2, 3], dtype=np.dtype('c') + + def test_log1p_compiler_shenanigans(self): + # Check if log1p is behaving on 32 bit intel systems. + assert_(np.isfinite(np.log1p(np.exp2(-53)))) + + def test_fromiter_comparison(self): + a = np.fromiter(list(range(10)), dtype='b') + b = np.fromiter(list(range(10)), dtype='B') + assert_(np.all(a == np.array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]))) + assert_(np.all(b == np.array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]))) + + def test_fromstring_crash(self): + # Ticket #1345: the following should not cause a crash + with assert_warns(DeprecationWarning): + np.fromstring(b'aa, aa, 1.0', sep=',') + + def test_ticket_1539(self): + dtypes = [x for x in np._core.sctypeDict.values() + if (issubclass(x, np.number) + and not issubclass(x, np.timedelta64))] + a = np.array([], np.bool) # not x[0] because it is unordered + failures = [] + + for x in dtypes: + b = a.astype(x) + for y in dtypes: + c = a.astype(y) + try: + d = np.dot(b, c) + except TypeError: + failures.append((x, y)) + else: + if d != 0: + failures.append((x, y)) + if failures: + raise AssertionError("Failures: %r" % failures) + + def test_ticket_1538(self): + x = np.finfo(np.float32) + for name in 'eps epsneg max min resolution tiny'.split(): + assert_equal(type(getattr(x, name)), np.float32, + err_msg=name) + + def test_ticket_1434(self): + # Check that the out= argument in var and std has an effect + data = np.array(((1, 2, 3), (4, 5, 6), (7, 8, 9))) + out = np.zeros((3,)) + + ret = data.var(axis=1, out=out) + assert_(ret is out) + assert_array_equal(ret, data.var(axis=1)) + + ret = data.std(axis=1, out=out) + assert_(ret is out) + assert_array_equal(ret, data.std(axis=1)) + + def test_complex_nan_maximum(self): + cnan = complex(0, np.nan) + assert_equal(np.maximum(1, cnan), cnan) + + def test_subclass_int_tuple_assignment(self): + # ticket #1563 + class Subclass(np.ndarray): + def __new__(cls, i): + return np.ones((i,)).view(cls) + + x = Subclass(5) + x[(0,)] = 2 # shouldn't raise an exception + assert_equal(x[0], 2) + + def test_ufunc_no_unnecessary_views(self): + # ticket #1548 + class Subclass(np.ndarray): + pass + x = np.array([1, 2, 3]).view(Subclass) + y = np.add(x, x, x) + assert_equal(id(x), id(y)) + + @pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") + def test_take_refcount(self): + # ticket #939 + a = np.arange(16, dtype=float) + a.shape = (4, 4) + lut = np.ones((5 + 3, 4), float) + rgba = np.empty(shape=a.shape + (4,), dtype=lut.dtype) + c1 = sys.getrefcount(rgba) + try: + lut.take(a, axis=0, mode='clip', out=rgba) + except TypeError: + pass + c2 = sys.getrefcount(rgba) + assert_equal(c1, c2) + + def test_fromfile_tofile_seeks(self): + # On Python 3, tofile/fromfile used to get (#1610) the Python + # file handle out of sync + f0 = tempfile.NamedTemporaryFile() + f = f0.file + f.write(np.arange(255, dtype='u1').tobytes()) + + f.seek(20) + ret = np.fromfile(f, count=4, dtype='u1') + assert_equal(ret, np.array([20, 21, 22, 23], dtype='u1')) + assert_equal(f.tell(), 24) + + f.seek(40) + np.array([1, 2, 3], dtype='u1').tofile(f) + assert_equal(f.tell(), 43) + + f.seek(40) + data = f.read(3) + assert_equal(data, b"\x01\x02\x03") + + f.seek(80) + f.read(4) + data = np.fromfile(f, dtype='u1', count=4) + assert_equal(data, np.array([84, 85, 86, 87], dtype='u1')) + + f.close() + + def test_complex_scalar_warning(self): + for tp in [np.csingle, np.cdouble, np.clongdouble]: + x = tp(1+2j) + assert_warns(ComplexWarning, float, x) + with suppress_warnings() as sup: + sup.filter(ComplexWarning) + assert_equal(float(x), float(x.real)) + + def test_complex_scalar_complex_cast(self): + for tp in [np.csingle, np.cdouble, np.clongdouble]: + x = tp(1+2j) + assert_equal(complex(x), 1+2j) + + def test_complex_boolean_cast(self): + # Ticket #2218 + for tp in [np.csingle, np.cdouble, np.clongdouble]: + x = np.array([0, 0+0.5j, 0.5+0j], dtype=tp) + assert_equal(x.astype(bool), np.array([0, 1, 1], dtype=bool)) + assert_(np.any(x)) + assert_(np.all(x[1:])) + + def test_uint_int_conversion(self): + x = 2**64 - 1 + assert_equal(int(np.uint64(x)), x) + + def test_duplicate_field_names_assign(self): + ra = np.fromiter(((i*3, i*2) for i in range(10)), dtype='i8,f8') + ra.dtype.names = ('f1', 'f2') + repr(ra) # should not cause a segmentation fault + assert_raises(ValueError, setattr, ra.dtype, 'names', ('f1', 'f1')) + + def test_eq_string_and_object_array(self): + # From e-mail thread "__eq__ with str and object" (Keith Goodman) + a1 = np.array(['a', 'b'], dtype=object) + a2 = np.array(['a', 'c']) + assert_array_equal(a1 == a2, [True, False]) + assert_array_equal(a2 == a1, [True, False]) + + def test_nonzero_byteswap(self): + a = np.array([0x80000000, 0x00000080, 0], dtype=np.uint32) + a.dtype = np.float32 + assert_equal(a.nonzero()[0], [1]) + a = a.byteswap() + a = a.view(a.dtype.newbyteorder()) + assert_equal(a.nonzero()[0], [1]) # [0] if nonzero() ignores swap + + def test_empty_mul(self): + a = np.array([1.]) + a[1:1] *= 2 + assert_equal(a, [1.]) + + def test_array_side_effect(self): + # The second use of itemsize was throwing an exception because in + # ctors.c, discover_itemsize was calling PyObject_Length without + # checking the return code. This failed to get the length of the + # number 2, and the exception hung around until something checked + # PyErr_Occurred() and returned an error. + assert_equal(np.dtype('S10').itemsize, 10) + np.array([['abc', 2], ['long ', '0123456789']], dtype=np.bytes_) + assert_equal(np.dtype('S10').itemsize, 10) + + def test_any_float(self): + # all and any for floats + a = np.array([0.1, 0.9]) + assert_(np.any(a)) + assert_(np.all(a)) + + def test_large_float_sum(self): + a = np.arange(10000, dtype='f') + assert_equal(a.sum(dtype='d'), a.astype('d').sum()) + + def test_ufunc_casting_out(self): + a = np.array(1.0, dtype=np.float32) + b = np.array(1.0, dtype=np.float64) + c = np.array(1.0, dtype=np.float32) + np.add(a, b, out=c) + assert_equal(c, 2.0) + + def test_array_scalar_contiguous(self): + # Array scalars are both C and Fortran contiguous + assert_(np.array(1.0).flags.c_contiguous) + assert_(np.array(1.0).flags.f_contiguous) + assert_(np.array(np.float32(1.0)).flags.c_contiguous) + assert_(np.array(np.float32(1.0)).flags.f_contiguous) + + def test_squeeze_contiguous(self): + # Similar to GitHub issue #387 + a = np.zeros((1, 2)).squeeze() + b = np.zeros((2, 2, 2), order='F')[:, :, ::2].squeeze() + assert_(a.flags.c_contiguous) + assert_(a.flags.f_contiguous) + assert_(b.flags.f_contiguous) + + def test_squeeze_axis_handling(self): + # Issue #10779 + # Ensure proper handling of objects + # that don't support axis specification + # when squeezing + + class OldSqueeze(np.ndarray): + + def __new__(cls, + input_array): + obj = np.asarray(input_array).view(cls) + return obj + + # it is perfectly reasonable that prior + # to numpy version 1.7.0 a subclass of ndarray + # might have been created that did not expect + # squeeze to have an axis argument + # NOTE: this example is somewhat artificial; + # it is designed to simulate an old API + # expectation to guard against regression + def squeeze(self): + return super().squeeze() + + oldsqueeze = OldSqueeze(np.array([[1],[2],[3]])) + + # if no axis argument is specified the old API + # expectation should give the correct result + assert_equal(np.squeeze(oldsqueeze), + np.array([1,2,3])) + + # likewise, axis=None should work perfectly well + # with the old API expectation + assert_equal(np.squeeze(oldsqueeze, axis=None), + np.array([1,2,3])) + + # however, specification of any particular axis + # should raise a TypeError in the context of the + # old API specification, even when using a valid + # axis specification like 1 for this array + with assert_raises(TypeError): + # this would silently succeed for array + # subclasses / objects that did not support + # squeeze axis argument handling before fixing + # Issue #10779 + np.squeeze(oldsqueeze, axis=1) + + # check for the same behavior when using an invalid + # axis specification -- in this case axis=0 does not + # have size 1, but the priority should be to raise + # a TypeError for the axis argument and NOT a + # ValueError for squeezing a non-empty dimension + with assert_raises(TypeError): + np.squeeze(oldsqueeze, axis=0) + + # the new API knows how to handle the axis + # argument and will return a ValueError if + # attempting to squeeze an axis that is not + # of length 1 + with assert_raises(ValueError): + np.squeeze(np.array([[1],[2],[3]]), axis=0) + + def test_reduce_contiguous(self): + # GitHub issue #387 + a = np.add.reduce(np.zeros((2, 1, 2)), (0, 1)) + b = np.add.reduce(np.zeros((2, 1, 2)), 1) + assert_(a.flags.c_contiguous) + assert_(a.flags.f_contiguous) + assert_(b.flags.c_contiguous) + + @pytest.mark.skipif(IS_PYSTON, reason="Pyston disables recursion checking") + def test_object_array_self_reference(self): + # Object arrays with references to themselves can cause problems + a = np.array(0, dtype=object) + a[()] = a + assert_raises(RecursionError, int, a) + assert_raises(RecursionError, float, a) + a[()] = None + + @pytest.mark.skipif(IS_PYSTON, reason="Pyston disables recursion checking") + def test_object_array_circular_reference(self): + # Test the same for a circular reference. + a = np.array(0, dtype=object) + b = np.array(0, dtype=object) + a[()] = b + b[()] = a + assert_raises(RecursionError, int, a) + # NumPy has no tp_traverse currently, so circular references + # cannot be detected. So resolve it: + a[()] = None + + # This was causing a to become like the above + a = np.array(0, dtype=object) + a[...] += 1 + assert_equal(a, 1) + + def test_object_array_nested(self): + # but is fine with a reference to a different array + a = np.array(0, dtype=object) + b = np.array(0, dtype=object) + a[()] = b + assert_equal(int(a), int(0)) + assert_equal(float(a), float(0)) + + def test_object_array_self_copy(self): + # An object array being copied into itself DECREF'ed before INCREF'ing + # causing segmentation faults (gh-3787) + a = np.array(object(), dtype=object) + np.copyto(a, a) + if HAS_REFCOUNT: + assert_(sys.getrefcount(a[()]) == 2) + a[()].__class__ # will segfault if object was deleted + + def test_zerosize_accumulate(self): + "Ticket #1733" + x = np.array([[42, 0]], dtype=np.uint32) + assert_equal(np.add.accumulate(x[:-1, 0]), []) + + def test_objectarray_setfield(self): + # Setfield should not overwrite Object fields with non-Object data + x = np.array([1, 2, 3], dtype=object) + assert_raises(TypeError, x.setfield, 4, np.int32, 0) + + def test_setting_rank0_string(self): + "Ticket #1736" + s1 = b"hello1" + s2 = b"hello2" + a = np.zeros((), dtype="S10") + a[()] = s1 + assert_equal(a, np.array(s1)) + a[()] = np.array(s2) + assert_equal(a, np.array(s2)) + + a = np.zeros((), dtype='f4') + a[()] = 3 + assert_equal(a, np.array(3)) + a[()] = np.array(4) + assert_equal(a, np.array(4)) + + def test_string_astype(self): + "Ticket #1748" + s1 = b'black' + s2 = b'white' + s3 = b'other' + a = np.array([[s1], [s2], [s3]]) + assert_equal(a.dtype, np.dtype('S5')) + b = a.astype(np.dtype('S0')) + assert_equal(b.dtype, np.dtype('S5')) + + def test_ticket_1756(self): + # Ticket #1756 + s = b'0123456789abcdef' + a = np.array([s]*5) + for i in range(1, 17): + a1 = np.array(a, "|S%d" % i) + a2 = np.array([s[:i]]*5) + assert_equal(a1, a2) + + def test_fields_strides(self): + "gh-2355" + r = np.frombuffer(b'abcdefghijklmnop'*4*3, dtype='i4,(2,3)u2') + assert_equal(r[0:3:2]['f1'], r['f1'][0:3:2]) + assert_equal(r[0:3:2]['f1'][0], r[0:3:2][0]['f1']) + assert_equal(r[0:3:2]['f1'][0][()], r[0:3:2][0]['f1'][()]) + assert_equal(r[0:3:2]['f1'][0].strides, r[0:3:2][0]['f1'].strides) + + def test_alignment_update(self): + # Check that alignment flag is updated on stride setting + a = np.arange(10) + assert_(a.flags.aligned) + a.strides = 3 + assert_(not a.flags.aligned) + + def test_ticket_1770(self): + "Should not segfault on python 3k" + import numpy as np + try: + a = np.zeros((1,), dtype=[('f1', 'f')]) + a['f1'] = 1 + a['f2'] = 1 + except ValueError: + pass + except Exception: + raise AssertionError + + def test_ticket_1608(self): + "x.flat shouldn't modify data" + x = np.array([[1, 2], [3, 4]]).T + np.array(x.flat) + assert_equal(x, [[1, 3], [2, 4]]) + + def test_pickle_string_overwrite(self): + import re + + data = np.array([1], dtype='b') + blob = pickle.dumps(data, protocol=1) + data = pickle.loads(blob) + + # Check that loads does not clobber interned strings + s = re.sub("a(.)", "\x01\\1", "a_") + assert_equal(s[0], "\x01") + data[0] = 0x6a + s = re.sub("a(.)", "\x01\\1", "a_") + assert_equal(s[0], "\x01") + + def test_pickle_bytes_overwrite(self): + for proto in range(2, pickle.HIGHEST_PROTOCOL + 1): + data = np.array([1], dtype='b') + data = pickle.loads(pickle.dumps(data, protocol=proto)) + data[0] = 0x7d + bytestring = "\x01 ".encode('ascii') + assert_equal(bytestring[0:1], '\x01'.encode('ascii')) + + def test_pickle_py2_array_latin1_hack(self): + # Check that unpickling hacks in Py3 that support + # encoding='latin1' work correctly. + + # Python2 output for pickle.dumps(numpy.array([129], dtype='b')) + data = b"cnumpy.core.multiarray\n_reconstruct\np0\n(cnumpy\nndarray\np1\n(I0\ntp2\nS'b'\np3\ntp4\nRp5\n(I1\n(I1\ntp6\ncnumpy\ndtype\np7\n(S'i1'\np8\nI0\nI1\ntp9\nRp10\n(I3\nS'|'\np11\nNNNI-1\nI-1\nI0\ntp12\nbI00\nS'\\x81'\np13\ntp14\nb." # noqa + # This should work: + result = pickle.loads(data, encoding='latin1') + assert_array_equal(result, np.array([129]).astype('b')) + # Should not segfault: + assert_raises(Exception, pickle.loads, data, encoding='koi8-r') + + def test_pickle_py2_scalar_latin1_hack(self): + # Check that scalar unpickling hack in Py3 that supports + # encoding='latin1' work correctly. + + # Python2 output for pickle.dumps(...) + datas = [ + # (original, python2_pickle, koi8r_validity) + (np.str_('\u6bd2'), + b"cnumpy.core.multiarray\nscalar\np0\n(cnumpy\ndtype\np1\n(S'U1'\np2\nI0\nI1\ntp3\nRp4\n(I3\nS'<'\np5\nNNNI4\nI4\nI0\ntp6\nbS'\\xd2k\\x00\\x00'\np7\ntp8\nRp9\n.", # noqa + 'invalid'), + + (np.float64(9e123), + b"cnumpy.core.multiarray\nscalar\np0\n(cnumpy\ndtype\np1\n(S'f8'\np2\nI0\nI1\ntp3\nRp4\n(I3\nS'<'\np5\nNNNI-1\nI-1\nI0\ntp6\nbS'O\\x81\\xb7Z\\xaa:\\xabY'\np7\ntp8\nRp9\n.", # noqa + 'invalid'), + + # different 8-bit code point in KOI8-R vs latin1 + (np.bytes_(b'\x9c'), + b"cnumpy.core.multiarray\nscalar\np0\n(cnumpy\ndtype\np1\n(S'S1'\np2\nI0\nI1\ntp3\nRp4\n(I3\nS'|'\np5\nNNNI1\nI1\nI0\ntp6\nbS'\\x9c'\np7\ntp8\nRp9\n.", # noqa + 'different'), + ] + for original, data, koi8r_validity in datas: + result = pickle.loads(data, encoding='latin1') + assert_equal(result, original) + + # Decoding under non-latin1 encoding (e.g.) KOI8-R can + # produce bad results, but should not segfault. + if koi8r_validity == 'different': + # Unicode code points happen to lie within latin1, + # but are different in koi8-r, resulting to silent + # bogus results + result = pickle.loads(data, encoding='koi8-r') + assert_(result != original) + elif koi8r_validity == 'invalid': + # Unicode code points outside latin1, so results + # to an encoding exception + assert_raises( + ValueError, pickle.loads, data, encoding='koi8-r' + ) + else: + raise ValueError(koi8r_validity) + + def test_structured_type_to_object(self): + a_rec = np.array([(0, 1), (3, 2)], dtype='i4,i8') + a_obj = np.empty((2,), dtype=object) + a_obj[0] = (0, 1) + a_obj[1] = (3, 2) + # astype records -> object + assert_equal(a_rec.astype(object), a_obj) + # '=' records -> object + b = np.empty_like(a_obj) + b[...] = a_rec + assert_equal(b, a_obj) + # '=' object -> records + b = np.empty_like(a_rec) + b[...] = a_obj + assert_equal(b, a_rec) + + def test_assign_obj_listoflists(self): + # Ticket # 1870 + # The inner list should get assigned to the object elements + a = np.zeros(4, dtype=object) + b = a.copy() + a[0] = [1] + a[1] = [2] + a[2] = [3] + a[3] = [4] + b[...] = [[1], [2], [3], [4]] + assert_equal(a, b) + # The first dimension should get broadcast + a = np.zeros((2, 2), dtype=object) + a[...] = [[1, 2]] + assert_equal(a, [[1, 2], [1, 2]]) + + @pytest.mark.slow_pypy + def test_memoryleak(self): + # Ticket #1917 - ensure that array data doesn't leak + for i in range(1000): + # 100MB times 1000 would give 100GB of memory usage if it leaks + a = np.empty((100000000,), dtype='i1') + del a + + @pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") + def test_ufunc_reduce_memoryleak(self): + a = np.arange(6) + acnt = sys.getrefcount(a) + np.add.reduce(a) + assert_equal(sys.getrefcount(a), acnt) + + def test_search_sorted_invalid_arguments(self): + # Ticket #2021, should not segfault. + x = np.arange(0, 4, dtype='datetime64[D]') + assert_raises(TypeError, x.searchsorted, 1) + + def test_string_truncation(self): + # Ticket #1990 - Data can be truncated in creation of an array from a + # mixed sequence of numeric values and strings (gh-2583) + for val in [True, 1234, 123.4, complex(1, 234)]: + for tostr, dtype in [(asunicode, "U"), (asbytes, "S")]: + b = np.array([val, tostr('xx')], dtype=dtype) + assert_equal(tostr(b[0]), tostr(val)) + b = np.array([tostr('xx'), val], dtype=dtype) + assert_equal(tostr(b[1]), tostr(val)) + + # test also with longer strings + b = np.array([val, tostr('xxxxxxxxxx')], dtype=dtype) + assert_equal(tostr(b[0]), tostr(val)) + b = np.array([tostr('xxxxxxxxxx'), val], dtype=dtype) + assert_equal(tostr(b[1]), tostr(val)) + + def test_string_truncation_ucs2(self): + # Ticket #2081. Python compiled with two byte unicode + # can lead to truncation if itemsize is not properly + # adjusted for NumPy's four byte unicode. + a = np.array(['abcd']) + assert_equal(a.dtype.itemsize, 16) + + def test_unique_stable(self): + # Ticket #2063 must always choose stable sort for argsort to + # get consistent results + v = np.array(([0]*5 + [1]*6 + [2]*6)*4) + res = np.unique(v, return_index=True) + tgt = (np.array([0, 1, 2]), np.array([ 0, 5, 11])) + assert_equal(res, tgt) + + def test_unicode_alloc_dealloc_match(self): + # Ticket #1578, the mismatch only showed up when running + # python-debug for python versions >= 2.7, and then as + # a core dump and error message. + a = np.array(['abc'], dtype=np.str_)[0] + del a + + def test_refcount_error_in_clip(self): + # Ticket #1588 + a = np.zeros((2,), dtype='>i2').clip(min=0) + x = a + a + # This used to segfault: + y = str(x) + # Check the final string: + assert_(y == "[0 0]") + + def test_searchsorted_wrong_dtype(self): + # Ticket #2189, it used to segfault, so we check that it raises the + # proper exception. + a = np.array([('a', 1)], dtype='S1, int') + assert_raises(TypeError, np.searchsorted, a, 1.2) + # Ticket #2066, similar problem: + dtype = np.rec.format_parser(['i4', 'i4'], [], []) + a = np.recarray((2,), dtype) + a[...] = [(1, 2), (3, 4)] + assert_raises(TypeError, np.searchsorted, a, 1) + + def test_complex64_alignment(self): + # Issue gh-2668 (trac 2076), segfault on sparc due to misalignment + dtt = np.complex64 + arr = np.arange(10, dtype=dtt) + # 2D array + arr2 = np.reshape(arr, (2, 5)) + # Fortran write followed by (C or F) read caused bus error + data_str = arr2.tobytes('F') + data_back = np.ndarray(arr2.shape, + arr2.dtype, + buffer=data_str, + order='F') + assert_array_equal(arr2, data_back) + + def test_structured_count_nonzero(self): + arr = np.array([0, 1]).astype('i4, 2i4')[:1] + count = np.count_nonzero(arr) + assert_equal(count, 0) + + def test_copymodule_preserves_f_contiguity(self): + a = np.empty((2, 2), order='F') + b = copy.copy(a) + c = copy.deepcopy(a) + assert_(b.flags.fortran) + assert_(b.flags.f_contiguous) + assert_(c.flags.fortran) + assert_(c.flags.f_contiguous) + + def test_fortran_order_buffer(self): + import numpy as np + a = np.array([['Hello', 'Foob']], dtype='U5', order='F') + arr = np.ndarray(shape=[1, 2, 5], dtype='U1', buffer=a) + arr2 = np.array([[['H', 'e', 'l', 'l', 'o'], + ['F', 'o', 'o', 'b', '']]]) + assert_array_equal(arr, arr2) + + def test_assign_from_sequence_error(self): + # Ticket #4024. + arr = np.array([1, 2, 3]) + assert_raises(ValueError, arr.__setitem__, slice(None), [9, 9]) + arr.__setitem__(slice(None), [9]) + assert_equal(arr, [9, 9, 9]) + + def test_format_on_flex_array_element(self): + # Ticket #4369. + dt = np.dtype([('date', ' 0: + # unpickling ndarray goes through _frombuffer for protocol 5 + assert b'numpy._core.numeric' in s + else: + assert b'numpy._core.multiarray' in s + + def test_object_casting_errors(self): + # gh-11993 update to ValueError (see gh-16909), since strings can in + # principle be converted to complex, but this string cannot. + arr = np.array(['AAAAA', 18465886.0, 18465886.0], dtype=object) + assert_raises(ValueError, arr.astype, 'c8') + + def test_eff1d_casting(self): + # gh-12711 + x = np.array([1, 2, 4, 7, 0], dtype=np.int16) + res = np.ediff1d(x, to_begin=-99, to_end=np.array([88, 99])) + assert_equal(res, [-99, 1, 2, 3, -7, 88, 99]) + + # The use of safe casting means, that 1<<20 is cast unsafely, an + # error may be better, but currently there is no mechanism for it. + res = np.ediff1d(x, to_begin=(1<<20), to_end=(1<<20)) + assert_equal(res, [0, 1, 2, 3, -7, 0]) + + def test_pickle_datetime64_array(self): + # gh-12745 (would fail with pickle5 installed) + d = np.datetime64('2015-07-04 12:59:59.50', 'ns') + arr = np.array([d]) + for proto in range(2, pickle.HIGHEST_PROTOCOL + 1): + dumped = pickle.dumps(arr, protocol=proto) + assert_equal(pickle.loads(dumped), arr) + + def test_bad_array_interface(self): + class T: + __array_interface__ = {} + + with assert_raises(ValueError): + np.array([T()]) + + def test_2d__array__shape(self): + class T: + def __array__(self, dtype=None, copy=None): + return np.ndarray(shape=(0,0)) + + # Make sure __array__ is used instead of Sequence methods. + def __iter__(self): + return iter([]) + + def __getitem__(self, idx): + raise AssertionError("__getitem__ was called") + + def __len__(self): + return 0 + + + t = T() + # gh-13659, would raise in broadcasting [x=t for x in result] + arr = np.array([t]) + assert arr.shape == (1, 0, 0) + + @pytest.mark.skipif(sys.maxsize < 2 ** 31 + 1, reason='overflows 32-bit python') + def test_to_ctypes(self): + #gh-14214 + arr = np.zeros((2 ** 31 + 1,), 'b') + assert arr.size * arr.itemsize > 2 ** 31 + c_arr = np.ctypeslib.as_ctypes(arr) + assert_equal(c_arr._length_, arr.size) + + def test_complex_conversion_error(self): + # gh-17068 + with pytest.raises(TypeError, match=r"Unable to convert dtype.*"): + complex(np.array("now", np.datetime64)) + + def test__array_interface__descr(self): + # gh-17068 + dt = np.dtype(dict(names=['a', 'b'], + offsets=[0, 0], + formats=[np.int64, np.int64])) + descr = np.array((1, 1), dtype=dt).__array_interface__['descr'] + assert descr == [('', '|V8')] # instead of [(b'', '|V8')] + + @pytest.mark.skipif(sys.maxsize < 2 ** 31 + 1, reason='overflows 32-bit python') + @requires_memory(free_bytes=9e9) + def test_dot_big_stride(self): + # gh-17111 + # blas stride = stride//itemsize > int32 max + int32_max = np.iinfo(np.int32).max + n = int32_max + 3 + a = np.empty([n], dtype=np.float32) + b = a[::n-1] + b[...] = 1 + assert b.strides[0] > int32_max * b.dtype.itemsize + assert np.dot(b, b) == 2.0 + + def test_frompyfunc_name(self): + # name conversion was failing for python 3 strings + # resulting in the default '?' name. Also test utf-8 + # encoding using non-ascii name. + def cassé(x): + return x + + f = np.frompyfunc(cassé, 1, 1) + assert str(f) == "" + + @pytest.mark.parametrize("operation", [ + 'add', 'subtract', 'multiply', 'floor_divide', + 'conjugate', 'fmod', 'square', 'reciprocal', + 'power', 'absolute', 'negative', 'positive', + 'greater', 'greater_equal', 'less', + 'less_equal', 'equal', 'not_equal', 'logical_and', + 'logical_not', 'logical_or', 'bitwise_and', 'bitwise_or', + 'bitwise_xor', 'invert', 'left_shift', 'right_shift', + 'gcd', 'lcm' + ] + ) + @pytest.mark.parametrize("order", [ + ('b->', 'B->'), + ('h->', 'H->'), + ('i->', 'I->'), + ('l->', 'L->'), + ('q->', 'Q->'), + ] + ) + def test_ufunc_order(self, operation, order): + # gh-18075 + # Ensure signed types before unsigned + def get_idx(string, str_lst): + for i, s in enumerate(str_lst): + if string in s: + return i + raise ValueError(f"{string} not in list") + types = getattr(np, operation).types + assert get_idx(order[0], types) < get_idx(order[1], types), ( + f"Unexpected types order of ufunc in {operation}" + f"for {order}. Possible fix: Use signed before unsigned" + "in generate_umath.py") + + def test_nonbool_logical(self): + # gh-22845 + # create two arrays with bit patterns that do not overlap. + # needs to be large enough to test both SIMD and scalar paths + size = 100 + a = np.frombuffer(b'\x01' * size, dtype=np.bool) + b = np.frombuffer(b'\x80' * size, dtype=np.bool) + expected = np.ones(size, dtype=np.bool) + assert_array_equal(np.logical_and(a, b), expected) + + @pytest.mark.skipif(IS_PYPY, reason="PyPy issue 2742") + def test_gh_23737(self): + with pytest.raises(TypeError, match="not an acceptable base type"): + class Y(np.flexible): + pass + + with pytest.raises(TypeError, match="not an acceptable base type"): + class X(np.flexible, np.ma.core.MaskedArray): + pass + + def test_load_ufunc_pickle(self): + # ufuncs are pickled with a semi-private path in + # numpy.core._multiarray_umath and must be loadable without warning + # despite np.core being deprecated. + test_data = b'\x80\x04\x95(\x00\x00\x00\x00\x00\x00\x00\x8c\x1cnumpy.core._multiarray_umath\x94\x8c\x03add\x94\x93\x94.' # noqa + result = pickle.loads(test_data, encoding='bytes') + assert result is np.add + + def test__array_namespace__(self): + arr = np.arange(2) + + xp = arr.__array_namespace__() + assert xp is np + xp = arr.__array_namespace__(api_version="2021.12") + assert xp is np + xp = arr.__array_namespace__(api_version="2022.12") + assert xp is np + xp = arr.__array_namespace__(api_version=None) + assert xp is np + + with pytest.raises( + ValueError, + match="Version \"2023.12\" of the Array API Standard " + "is not supported." + ): + arr.__array_namespace__(api_version="2023.12") + + with pytest.raises( + ValueError, + match="Only None and strings are allowed as the Array API version" + ): + arr.__array_namespace__(api_version=2023) + + def test_isin_refcnt_bug(self): + # gh-25295 + for _ in range(1000): + np.isclose(np.int64(2), np.int64(2), atol=1e-15, rtol=1e-300) + + def test_replace_regression(self): + # gh-25513 segfault + carr = np.char.chararray((2,), itemsize=25) + test_strings = [b' 4.52173913043478315E+00', + b' 4.95652173913043548E+00'] + carr[:] = test_strings + out = carr.replace(b"E", b"D") + expected = np.char.chararray((2,), itemsize=25) + expected[:] = [s.replace(b"E", b"D") for s in test_strings] + assert_array_equal(out, expected) + + def test_logspace_base_does_not_determine_dtype(self): + # gh-24957 and cupy/cupy/issues/7946 + start = np.array([0, 2], dtype=np.float16) + stop = np.array([2, 0], dtype=np.float16) + out = np.logspace(start, stop, num=5, axis=1, dtype=np.float32) + expected = np.array([[1., 3.1621094, 10., 31.625, 100.], + [100., 31.625, 10., 3.1621094, 1.]], + dtype=np.float32) + assert_almost_equal(out, expected) + # Check test fails if the calculation is done in float64, as happened + # before when a python float base incorrectly influenced the dtype. + out2 = np.logspace(start, stop, num=5, axis=1, dtype=np.float32, + base=np.array([10.0])) + with pytest.raises(AssertionError, match="not almost equal"): + assert_almost_equal(out2, expected) + + def test_vectorize_fixed_width_string(self): + arr = np.array(["SOme wOrd DŽ ß ᾛ ΣΣ ffi⁵Å Ç Ⅰ"]).astype(np.str_) + f = str.casefold + res = np.vectorize(f, otypes=[arr.dtype])(arr) + assert res.dtype == "U30" + + def test_sort_unique_crash(self): + # gh-27037 + for _ in range(4): + vals = np.linspace(0, 1, num=128) + data = np.broadcast_to(vals, (128, 128, 128)) + data = data.transpose(0, 2, 1).copy() + np.unique(data) + + def test_repeated_square_consistency(self): + # gh-26940 + buf = np.array([-5.171866611150749e-07 + 2.5618634555957426e-07j, + 0, 0, 0, 0, 0]) + # Test buffer with regular and reverse strides + for in_vec in [buf[:3], buf[:3][::-1]]: + expected_res = np.square(in_vec) + # Output vector immediately follows input vector + # to reproduce off-by-one in nomemoverlap check. + for res in [buf[3:], buf[3:][::-1]]: + res = buf[3:] + np.square(in_vec, out=res) + assert_equal(res, expected_res) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalar_ctors.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalar_ctors.py new file mode 100644 index 0000000000000000000000000000000000000000..f4f36f0c3b8200791ca0621335bf950f438a1e09 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalar_ctors.py @@ -0,0 +1,204 @@ +""" +Test the scalar constructors, which also do type-coercion +""" +import pytest + +import numpy as np +from numpy.testing import ( + assert_equal, assert_almost_equal, assert_warns, + ) + +class TestFromString: + def test_floating(self): + # Ticket #640, floats from string + fsingle = np.single('1.234') + fdouble = np.double('1.234') + flongdouble = np.longdouble('1.234') + assert_almost_equal(fsingle, 1.234) + assert_almost_equal(fdouble, 1.234) + assert_almost_equal(flongdouble, 1.234) + + def test_floating_overflow(self): + """ Strings containing an unrepresentable float overflow """ + fhalf = np.half('1e10000') + assert_equal(fhalf, np.inf) + fsingle = np.single('1e10000') + assert_equal(fsingle, np.inf) + fdouble = np.double('1e10000') + assert_equal(fdouble, np.inf) + flongdouble = assert_warns(RuntimeWarning, np.longdouble, '1e10000') + assert_equal(flongdouble, np.inf) + + fhalf = np.half('-1e10000') + assert_equal(fhalf, -np.inf) + fsingle = np.single('-1e10000') + assert_equal(fsingle, -np.inf) + fdouble = np.double('-1e10000') + assert_equal(fdouble, -np.inf) + flongdouble = assert_warns(RuntimeWarning, np.longdouble, '-1e10000') + assert_equal(flongdouble, -np.inf) + + +class TestExtraArgs: + def test_superclass(self): + # try both positional and keyword arguments + s = np.str_(b'\\x61', encoding='unicode-escape') + assert s == 'a' + s = np.str_(b'\\x61', 'unicode-escape') + assert s == 'a' + + # previously this would return '\\xx' + with pytest.raises(UnicodeDecodeError): + np.str_(b'\\xx', encoding='unicode-escape') + with pytest.raises(UnicodeDecodeError): + np.str_(b'\\xx', 'unicode-escape') + + # superclass fails, but numpy succeeds + assert np.bytes_(-2) == b'-2' + + def test_datetime(self): + dt = np.datetime64('2000-01', ('M', 2)) + assert np.datetime_data(dt) == ('M', 2) + + with pytest.raises(TypeError): + np.datetime64('2000', garbage=True) + + def test_bool(self): + with pytest.raises(TypeError): + np.bool(False, garbage=True) + + def test_void(self): + with pytest.raises(TypeError): + np.void(b'test', garbage=True) + + +class TestFromInt: + def test_intp(self): + # Ticket #99 + assert_equal(1024, np.intp(1024)) + + def test_uint64_from_negative(self): + with pytest.raises(OverflowError): + np.uint64(-2) + + +int_types = [np.byte, np.short, np.intc, np.long, np.longlong] +uint_types = [np.ubyte, np.ushort, np.uintc, np.ulong, np.ulonglong] +float_types = [np.half, np.single, np.double, np.longdouble] +cfloat_types = [np.csingle, np.cdouble, np.clongdouble] + + +class TestArrayFromScalar: + """ gh-15467 and gh-19125 """ + + def _do_test(self, t1, t2, arg=2): + if arg is None: + x = t1() + elif isinstance(arg, tuple): + if t1 is np.clongdouble: + pytest.xfail("creating a clongdouble from real and " + "imaginary parts isn't supported") + x = t1(*arg) + else: + x = t1(arg) + arr = np.array(x, dtype=t2) + # type should be preserved exactly + if t2 is None: + assert arr.dtype.type is t1 + else: + assert arr.dtype.type is t2 + + @pytest.mark.parametrize('t1', int_types + uint_types) + @pytest.mark.parametrize('t2', int_types + uint_types + [None]) + def test_integers(self, t1, t2): + return self._do_test(t1, t2) + + @pytest.mark.parametrize('t1', float_types) + @pytest.mark.parametrize('t2', float_types + [None]) + def test_reals(self, t1, t2): + return self._do_test(t1, t2) + + @pytest.mark.parametrize('t1', cfloat_types) + @pytest.mark.parametrize('t2', cfloat_types + [None]) + @pytest.mark.parametrize('arg', [2, 1 + 3j, (1, 2), None]) + def test_complex(self, t1, t2, arg): + self._do_test(t1, t2, arg) + + @pytest.mark.parametrize('t', cfloat_types) + def test_complex_errors(self, t): + with pytest.raises(TypeError): + t(1j, 1j) + with pytest.raises(TypeError): + t(1, None) + with pytest.raises(TypeError): + t(None, 1) + + +@pytest.mark.parametrize("length", + [5, np.int8(5), np.array(5, dtype=np.uint16)]) +def test_void_via_length(length): + res = np.void(length) + assert type(res) is np.void + assert res.item() == b"\0" * 5 + assert res.dtype == "V5" + +@pytest.mark.parametrize("bytes_", + [b"spam", np.array(567.)]) +def test_void_from_byteslike(bytes_): + res = np.void(bytes_) + expected = bytes(bytes_) + assert type(res) is np.void + assert res.item() == expected + + # Passing dtype can extend it (this is how filling works) + res = np.void(bytes_, dtype="V100") + assert type(res) is np.void + assert res.item()[:len(expected)] == expected + assert res.item()[len(expected):] == b"\0" * (res.nbytes - len(expected)) + # As well as shorten: + res = np.void(bytes_, dtype="V4") + assert type(res) is np.void + assert res.item() == expected[:4] + +def test_void_arraylike_trumps_byteslike(): + # The memoryview is converted as an array-like of shape (18,) + # rather than a single bytes-like of that length. + m = memoryview(b"just one mintleaf?") + res = np.void(m) + assert type(res) is np.ndarray + assert res.dtype == "V1" + assert res.shape == (18,) + +def test_void_dtype_arg(): + # Basic test for the dtype argument (positional and keyword) + res = np.void((1, 2), dtype="i,i") + assert res.item() == (1, 2) + res = np.void((2, 3), "i,i") + assert res.item() == (2, 3) + +@pytest.mark.parametrize("data", + [5, np.int8(5), np.array(5, dtype=np.uint16)]) +def test_void_from_integer_with_dtype(data): + # The "length" meaning is ignored, rather data is used: + res = np.void(data, dtype="i,i") + assert type(res) is np.void + assert res.dtype == "i,i" + assert res["f0"] == 5 and res["f1"] == 5 + +def test_void_from_structure(): + dtype = np.dtype([('s', [('f', 'f8'), ('u', 'U1')]), ('i', 'i2')]) + data = np.array(((1., 'a'), 2), dtype=dtype) + res = np.void(data[()], dtype=dtype) + assert type(res) is np.void + assert res.dtype == dtype + assert res == data[()] + +def test_void_bad_dtype(): + with pytest.raises(TypeError, + match="void: descr must be a `void.*int64"): + np.void(4, dtype="i8") + + # Subarray dtype (with shape `(4,)` is rejected): + with pytest.raises(TypeError, + match=r"void: descr must be a `void.*\(4,\)"): + np.void(4, dtype="4i") diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalar_methods.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalar_methods.py new file mode 100644 index 0000000000000000000000000000000000000000..b0bdd126e8a78f46a0b7e355a3e32a08b6d9d33c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalar_methods.py @@ -0,0 +1,205 @@ +""" +Test the scalar constructors, which also do type-coercion +""" +import fractions +import platform +import types +from typing import Any, Type + +import pytest +import numpy as np + +from numpy._core import sctypes +from numpy.testing import assert_equal, assert_raises, IS_MUSL + + +class TestAsIntegerRatio: + # derived in part from the cpython test "test_floatasratio" + + @pytest.mark.parametrize("ftype", [ + np.half, np.single, np.double, np.longdouble]) + @pytest.mark.parametrize("f, ratio", [ + (0.875, (7, 8)), + (-0.875, (-7, 8)), + (0.0, (0, 1)), + (11.5, (23, 2)), + ]) + def test_small(self, ftype, f, ratio): + assert_equal(ftype(f).as_integer_ratio(), ratio) + + @pytest.mark.parametrize("ftype", [ + np.half, np.single, np.double, np.longdouble]) + def test_simple_fractions(self, ftype): + R = fractions.Fraction + assert_equal(R(0, 1), + R(*ftype(0.0).as_integer_ratio())) + assert_equal(R(5, 2), + R(*ftype(2.5).as_integer_ratio())) + assert_equal(R(1, 2), + R(*ftype(0.5).as_integer_ratio())) + assert_equal(R(-2100, 1), + R(*ftype(-2100.0).as_integer_ratio())) + + @pytest.mark.parametrize("ftype", [ + np.half, np.single, np.double, np.longdouble]) + def test_errors(self, ftype): + assert_raises(OverflowError, ftype('inf').as_integer_ratio) + assert_raises(OverflowError, ftype('-inf').as_integer_ratio) + assert_raises(ValueError, ftype('nan').as_integer_ratio) + + def test_against_known_values(self): + R = fractions.Fraction + assert_equal(R(1075, 512), + R(*np.half(2.1).as_integer_ratio())) + assert_equal(R(-1075, 512), + R(*np.half(-2.1).as_integer_ratio())) + assert_equal(R(4404019, 2097152), + R(*np.single(2.1).as_integer_ratio())) + assert_equal(R(-4404019, 2097152), + R(*np.single(-2.1).as_integer_ratio())) + assert_equal(R(4728779608739021, 2251799813685248), + R(*np.double(2.1).as_integer_ratio())) + assert_equal(R(-4728779608739021, 2251799813685248), + R(*np.double(-2.1).as_integer_ratio())) + # longdouble is platform dependent + + @pytest.mark.parametrize("ftype, frac_vals, exp_vals", [ + # dtype test cases generated using hypothesis + # first five generated cases per dtype + (np.half, [0.0, 0.01154830649280303, 0.31082276347447274, + 0.527350517124794, 0.8308562335072596], + [0, 1, 0, -8, 12]), + (np.single, [0.0, 0.09248576989263226, 0.8160498218131407, + 0.17389442853722373, 0.7956044195067877], + [0, 12, 10, 17, -26]), + (np.double, [0.0, 0.031066908499895136, 0.5214135908877832, + 0.45780736035689296, 0.5906586745934036], + [0, -801, 51, 194, -653]), + pytest.param( + np.longdouble, + [0.0, 0.20492557202724854, 0.4277180662199366, 0.9888085019891495, + 0.9620175814461964], + [0, -7400, 14266, -7822, -8721], + marks=[ + pytest.mark.skipif( + np.finfo(np.double) == np.finfo(np.longdouble), + reason="long double is same as double"), + pytest.mark.skipif( + platform.machine().startswith("ppc"), + reason="IBM double double"), + ] + ) + ]) + def test_roundtrip(self, ftype, frac_vals, exp_vals): + for frac, exp in zip(frac_vals, exp_vals): + f = np.ldexp(ftype(frac), exp) + assert f.dtype == ftype + n, d = f.as_integer_ratio() + + try: + nf = np.longdouble(n) + df = np.longdouble(d) + if not np.isfinite(df): + raise OverflowError + except (OverflowError, RuntimeWarning): + # the values may not fit in any float type + pytest.skip("longdouble too small on this platform") + + assert_equal(nf / df, f, "{}/{}".format(n, d)) + + +class TestIsInteger: + @pytest.mark.parametrize("str_value", ["inf", "nan"]) + @pytest.mark.parametrize("code", np.typecodes["Float"]) + def test_special(self, code: str, str_value: str) -> None: + cls = np.dtype(code).type + value = cls(str_value) + assert not value.is_integer() + + @pytest.mark.parametrize( + "code", np.typecodes["Float"] + np.typecodes["AllInteger"] + ) + def test_true(self, code: str) -> None: + float_array = np.arange(-5, 5).astype(code) + for value in float_array: + assert value.is_integer() + + @pytest.mark.parametrize("code", np.typecodes["Float"]) + def test_false(self, code: str) -> None: + float_array = np.arange(-5, 5).astype(code) + float_array *= 1.1 + for value in float_array: + if value == 0: + continue + assert not value.is_integer() + + +class TestClassGetItem: + @pytest.mark.parametrize("cls", [ + np.number, + np.integer, + np.inexact, + np.unsignedinteger, + np.signedinteger, + np.floating, + ]) + def test_abc(self, cls: Type[np.number]) -> None: + alias = cls[Any] + assert isinstance(alias, types.GenericAlias) + assert alias.__origin__ is cls + + def test_abc_complexfloating(self) -> None: + alias = np.complexfloating[Any, Any] + assert isinstance(alias, types.GenericAlias) + assert alias.__origin__ is np.complexfloating + + @pytest.mark.parametrize("arg_len", range(4)) + def test_abc_complexfloating_subscript_tuple(self, arg_len: int) -> None: + arg_tup = (Any,) * arg_len + if arg_len in (1, 2): + assert np.complexfloating[arg_tup] + else: + match = f"Too {'few' if arg_len == 0 else 'many'} arguments" + with pytest.raises(TypeError, match=match): + np.complexfloating[arg_tup] + + @pytest.mark.parametrize("cls", [np.generic, np.flexible, np.character]) + def test_abc_non_numeric(self, cls: Type[np.generic]) -> None: + with pytest.raises(TypeError): + cls[Any] + + @pytest.mark.parametrize("code", np.typecodes["All"]) + def test_concrete(self, code: str) -> None: + cls = np.dtype(code).type + with pytest.raises(TypeError): + cls[Any] + + @pytest.mark.parametrize("arg_len", range(4)) + def test_subscript_tuple(self, arg_len: int) -> None: + arg_tup = (Any,) * arg_len + if arg_len == 1: + assert np.number[arg_tup] + else: + with pytest.raises(TypeError): + np.number[arg_tup] + + def test_subscript_scalar(self) -> None: + assert np.number[Any] + + +class TestBitCount: + # derived in part from the cpython test "test_bit_count" + + @pytest.mark.parametrize("itype", sctypes['int']+sctypes['uint']) + def test_small(self, itype): + for a in range(max(np.iinfo(itype).min, 0), 128): + msg = f"Smoke test for {itype}({a}).bit_count()" + assert itype(a).bit_count() == bin(a).count("1"), msg + + def test_bit_count(self): + for exp in [10, 17, 63]: + a = 2**exp + assert np.uint64(a).bit_count() == 1 + assert np.uint64(a - 1).bit_count() == exp + assert np.uint64(a ^ 63).bit_count() == 7 + assert np.uint64((a - 1) ^ 510).bit_count() == exp - 8 diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarbuffer.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarbuffer.py new file mode 100644 index 0000000000000000000000000000000000000000..26cf39530f65e25d87937516280c690cb65fa818 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarbuffer.py @@ -0,0 +1,153 @@ +""" +Test scalar buffer interface adheres to PEP 3118 +""" +import numpy as np +from numpy._core._rational_tests import rational +from numpy._core._multiarray_tests import get_buffer_info +import pytest + +from numpy.testing import assert_, assert_equal, assert_raises + +# PEP3118 format strings for native (standard alignment and byteorder) types +scalars_and_codes = [ + (np.bool, '?'), + (np.byte, 'b'), + (np.short, 'h'), + (np.intc, 'i'), + (np.long, 'l'), + (np.longlong, 'q'), + (np.ubyte, 'B'), + (np.ushort, 'H'), + (np.uintc, 'I'), + (np.ulong, 'L'), + (np.ulonglong, 'Q'), + (np.half, 'e'), + (np.single, 'f'), + (np.double, 'd'), + (np.longdouble, 'g'), + (np.csingle, 'Zf'), + (np.cdouble, 'Zd'), + (np.clongdouble, 'Zg'), +] +scalars_only, codes_only = zip(*scalars_and_codes) + + +class TestScalarPEP3118: + + @pytest.mark.parametrize('scalar', scalars_only, ids=codes_only) + def test_scalar_match_array(self, scalar): + x = scalar() + a = np.array([], dtype=np.dtype(scalar)) + mv_x = memoryview(x) + mv_a = memoryview(a) + assert_equal(mv_x.format, mv_a.format) + + @pytest.mark.parametrize('scalar', scalars_only, ids=codes_only) + def test_scalar_dim(self, scalar): + x = scalar() + mv_x = memoryview(x) + assert_equal(mv_x.itemsize, np.dtype(scalar).itemsize) + assert_equal(mv_x.ndim, 0) + assert_equal(mv_x.shape, ()) + assert_equal(mv_x.strides, ()) + assert_equal(mv_x.suboffsets, ()) + + @pytest.mark.parametrize('scalar, code', scalars_and_codes, ids=codes_only) + def test_scalar_code_and_properties(self, scalar, code): + x = scalar() + expected = dict(strides=(), itemsize=x.dtype.itemsize, ndim=0, + shape=(), format=code, readonly=True) + + mv_x = memoryview(x) + assert self._as_dict(mv_x) == expected + + @pytest.mark.parametrize('scalar', scalars_only, ids=codes_only) + def test_scalar_buffers_readonly(self, scalar): + x = scalar() + with pytest.raises(BufferError, match="scalar buffer is readonly"): + get_buffer_info(x, ["WRITABLE"]) + + def test_void_scalar_structured_data(self): + dt = np.dtype([('name', np.str_, 16), ('grades', np.float64, (2,))]) + x = np.array(('ndarray_scalar', (1.2, 3.0)), dtype=dt)[()] + assert_(isinstance(x, np.void)) + mv_x = memoryview(x) + expected_size = 16 * np.dtype((np.str_, 1)).itemsize + expected_size += 2 * np.dtype(np.float64).itemsize + assert_equal(mv_x.itemsize, expected_size) + assert_equal(mv_x.ndim, 0) + assert_equal(mv_x.shape, ()) + assert_equal(mv_x.strides, ()) + assert_equal(mv_x.suboffsets, ()) + + # check scalar format string against ndarray format string + a = np.array([('Sarah', (8.0, 7.0)), ('John', (6.0, 7.0))], dtype=dt) + assert_(isinstance(a, np.ndarray)) + mv_a = memoryview(a) + assert_equal(mv_x.itemsize, mv_a.itemsize) + assert_equal(mv_x.format, mv_a.format) + + # Check that we do not allow writeable buffer export (technically + # we could allow it sometimes here...) + with pytest.raises(BufferError, match="scalar buffer is readonly"): + get_buffer_info(x, ["WRITABLE"]) + + def _as_dict(self, m): + return dict(strides=m.strides, shape=m.shape, itemsize=m.itemsize, + ndim=m.ndim, format=m.format, readonly=m.readonly) + + def test_datetime_memoryview(self): + # gh-11656 + # Values verified with v1.13.3, shape is not () as in test_scalar_dim + + dt1 = np.datetime64('2016-01-01') + dt2 = np.datetime64('2017-01-01') + expected = dict(strides=(1,), itemsize=1, ndim=1, shape=(8,), + format='B', readonly=True) + v = memoryview(dt1) + assert self._as_dict(v) == expected + + v = memoryview(dt2 - dt1) + assert self._as_dict(v) == expected + + dt = np.dtype([('a', 'uint16'), ('b', 'M8[s]')]) + a = np.empty(1, dt) + # Fails to create a PEP 3118 valid buffer + assert_raises((ValueError, BufferError), memoryview, a[0]) + + # Check that we do not allow writeable buffer export + with pytest.raises(BufferError, match="scalar buffer is readonly"): + get_buffer_info(dt1, ["WRITABLE"]) + + @pytest.mark.parametrize('s', [ + pytest.param("\x32\x32", id="ascii"), + pytest.param("\uFE0F\uFE0F", id="basic multilingual"), + pytest.param("\U0001f4bb\U0001f4bb", id="non-BMP"), + ]) + def test_str_ucs4(self, s): + s = np.str_(s) # only our subclass implements the buffer protocol + + # all the same, characters always encode as ucs4 + expected = dict(strides=(), itemsize=8, ndim=0, shape=(), format='2w', + readonly=True) + + v = memoryview(s) + assert self._as_dict(v) == expected + + # integers of the paltform-appropriate endianness + code_points = np.frombuffer(v, dtype='i4') + + assert_equal(code_points, [ord(c) for c in s]) + + # Check that we do not allow writeable buffer export + with pytest.raises(BufferError, match="scalar buffer is readonly"): + get_buffer_info(s, ["WRITABLE"]) + + def test_user_scalar_fails_buffer(self): + r = rational(1) + with assert_raises(TypeError): + memoryview(r) + + # Check that we do not allow writeable buffer export + with pytest.raises(BufferError, match="scalar buffer is readonly"): + get_buffer_info(r, ["WRITABLE"]) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarinherit.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarinherit.py new file mode 100644 index 0000000000000000000000000000000000000000..f9c574d5798ea477c396b2def85d27885217386b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarinherit.py @@ -0,0 +1,98 @@ +""" Test printing of scalar types. + +""" +import pytest + +import numpy as np +from numpy.testing import assert_, assert_raises + + +class A: + pass +class B(A, np.float64): + pass + +class C(B): + pass +class D(C, B): + pass + +class B0(np.float64, A): + pass +class C0(B0): + pass + +class HasNew: + def __new__(cls, *args, **kwargs): + return cls, args, kwargs + +class B1(np.float64, HasNew): + pass + + +class TestInherit: + def test_init(self): + x = B(1.0) + assert_(str(x) == '1.0') + y = C(2.0) + assert_(str(y) == '2.0') + z = D(3.0) + assert_(str(z) == '3.0') + + def test_init2(self): + x = B0(1.0) + assert_(str(x) == '1.0') + y = C0(2.0) + assert_(str(y) == '2.0') + + def test_gh_15395(self): + # HasNew is the second base, so `np.float64` should have priority + x = B1(1.0) + assert_(str(x) == '1.0') + + # previously caused RecursionError!? + with pytest.raises(TypeError): + B1(1.0, 2.0) + + +class TestCharacter: + def test_char_radd(self): + # GH issue 9620, reached gentype_add and raise TypeError + np_s = np.bytes_('abc') + np_u = np.str_('abc') + s = b'def' + u = 'def' + assert_(np_s.__radd__(np_s) is NotImplemented) + assert_(np_s.__radd__(np_u) is NotImplemented) + assert_(np_s.__radd__(s) is NotImplemented) + assert_(np_s.__radd__(u) is NotImplemented) + assert_(np_u.__radd__(np_s) is NotImplemented) + assert_(np_u.__radd__(np_u) is NotImplemented) + assert_(np_u.__radd__(s) is NotImplemented) + assert_(np_u.__radd__(u) is NotImplemented) + assert_(s + np_s == b'defabc') + assert_(u + np_u == 'defabc') + + class MyStr(str, np.generic): + # would segfault + pass + + with assert_raises(TypeError): + # Previously worked, but gave completely wrong result + ret = s + MyStr('abc') + + class MyBytes(bytes, np.generic): + # would segfault + pass + + ret = s + MyBytes(b'abc') + assert(type(ret) is type(s)) + assert ret == b"defabc" + + def test_char_repeat(self): + np_s = np.bytes_('abc') + np_u = np.str_('abc') + res_s = b'abc' * 5 + res_u = 'abc' * 5 + assert_(np_s * 5 == res_s) + assert_(np_u * 5 == res_u) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarmath.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarmath.py new file mode 100644 index 0000000000000000000000000000000000000000..057f84d176331989b160412fb216a88b444e8340 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarmath.py @@ -0,0 +1,1155 @@ +import contextlib +import sys +import warnings +import itertools +import operator +import platform +from numpy._utils import _pep440 +import pytest +from hypothesis import given, settings +from hypothesis.strategies import sampled_from +from hypothesis.extra import numpy as hynp + +import numpy as np +from numpy.exceptions import ComplexWarning +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_almost_equal, + assert_array_equal, IS_PYPY, suppress_warnings, _gen_alignment_data, + assert_warns, _SUPPORTS_SVE, + ) + +try: + COMPILERS = np.show_config(mode="dicts")["Compilers"] + USING_CLANG_CL = COMPILERS["c"]["name"] == "clang-cl" +except TypeError: + USING_CLANG_CL = False + +types = [np.bool, np.byte, np.ubyte, np.short, np.ushort, np.intc, np.uintc, + np.int_, np.uint, np.longlong, np.ulonglong, + np.single, np.double, np.longdouble, np.csingle, + np.cdouble, np.clongdouble] + +floating_types = np.floating.__subclasses__() +complex_floating_types = np.complexfloating.__subclasses__() + +objecty_things = [object(), None] + +reasonable_operators_for_scalars = [ + operator.lt, operator.le, operator.eq, operator.ne, operator.ge, + operator.gt, operator.add, operator.floordiv, operator.mod, + operator.mul, operator.pow, operator.sub, operator.truediv, +] + + +# This compares scalarmath against ufuncs. + +class TestTypes: + def test_types(self): + for atype in types: + a = atype(1) + assert_(a == 1, "error with %r: got %r" % (atype, a)) + + def test_type_add(self): + # list of types + for k, atype in enumerate(types): + a_scalar = atype(3) + a_array = np.array([3], dtype=atype) + for l, btype in enumerate(types): + b_scalar = btype(1) + b_array = np.array([1], dtype=btype) + c_scalar = a_scalar + b_scalar + c_array = a_array + b_array + # It was comparing the type numbers, but the new ufunc + # function-finding mechanism finds the lowest function + # to which both inputs can be cast - which produces 'l' + # when you do 'q' + 'b'. The old function finding mechanism + # skipped ahead based on the first argument, but that + # does not produce properly symmetric results... + assert_equal(c_scalar.dtype, c_array.dtype, + "error with types (%d/'%c' + %d/'%c')" % + (k, np.dtype(atype).char, l, np.dtype(btype).char)) + + def test_type_create(self): + for k, atype in enumerate(types): + a = np.array([1, 2, 3], atype) + b = atype([1, 2, 3]) + assert_equal(a, b) + + def test_leak(self): + # test leak of scalar objects + # a leak would show up in valgrind as still-reachable of ~2.6MB + for i in range(200000): + np.add(1, 1) + + +def check_ufunc_scalar_equivalence(op, arr1, arr2): + scalar1 = arr1[()] + scalar2 = arr2[()] + assert isinstance(scalar1, np.generic) + assert isinstance(scalar2, np.generic) + + if arr1.dtype.kind == "c" or arr2.dtype.kind == "c": + comp_ops = {operator.ge, operator.gt, operator.le, operator.lt} + if op in comp_ops and (np.isnan(scalar1) or np.isnan(scalar2)): + pytest.xfail("complex comp ufuncs use sort-order, scalars do not.") + if op == operator.pow and arr2.item() in [-1, 0, 0.5, 1, 2]: + # array**scalar special case can have different result dtype + # (Other powers may have issues also, but are not hit here.) + # TODO: It would be nice to resolve this issue. + pytest.skip("array**2 can have incorrect/weird result dtype") + + # ignore fpe's since they may just mismatch for integers anyway. + with warnings.catch_warnings(), np.errstate(all="ignore"): + # Comparisons DeprecationWarnings replacing errors (2022-03): + warnings.simplefilter("error", DeprecationWarning) + try: + res = op(arr1, arr2) + except Exception as e: + with pytest.raises(type(e)): + op(scalar1, scalar2) + else: + scalar_res = op(scalar1, scalar2) + assert_array_equal(scalar_res, res, strict=True) + + +@pytest.mark.slow +@settings(max_examples=10000, deadline=2000) +@given(sampled_from(reasonable_operators_for_scalars), + hynp.arrays(dtype=hynp.scalar_dtypes(), shape=()), + hynp.arrays(dtype=hynp.scalar_dtypes(), shape=())) +def test_array_scalar_ufunc_equivalence(op, arr1, arr2): + """ + This is a thorough test attempting to cover important promotion paths + and ensuring that arrays and scalars stay as aligned as possible. + However, if it creates troubles, it should maybe just be removed. + """ + check_ufunc_scalar_equivalence(op, arr1, arr2) + + +@pytest.mark.slow +@given(sampled_from(reasonable_operators_for_scalars), + hynp.scalar_dtypes(), hynp.scalar_dtypes()) +def test_array_scalar_ufunc_dtypes(op, dt1, dt2): + # Same as above, but don't worry about sampling weird values so that we + # do not have to sample as much + arr1 = np.array(2, dtype=dt1) + arr2 = np.array(3, dtype=dt2) # some power do weird things. + + check_ufunc_scalar_equivalence(op, arr1, arr2) + + +@pytest.mark.parametrize("fscalar", [np.float16, np.float32]) +def test_int_float_promotion_truediv(fscalar): + # Promotion for mixed int and float32/float16 must not go to float64 + i = np.int8(1) + f = fscalar(1) + expected = np.result_type(i, f) + assert (i / f).dtype == expected + assert (f / i).dtype == expected + # But normal int / int true division goes to float64: + assert (i / i).dtype == np.dtype("float64") + # For int16, result has to be ast least float32 (takes ufunc path): + assert (np.int16(1) / f).dtype == np.dtype("float32") + + +class TestBaseMath: + @pytest.mark.xfail(_SUPPORTS_SVE, reason="gh-22982") + def test_blocked(self): + # test alignments offsets for simd instructions + # alignments for vz + 2 * (vs - 1) + 1 + for dt, sz in [(np.float32, 11), (np.float64, 7), (np.int32, 11)]: + for out, inp1, inp2, msg in _gen_alignment_data(dtype=dt, + type='binary', + max_size=sz): + exp1 = np.ones_like(inp1) + inp1[...] = np.ones_like(inp1) + inp2[...] = np.zeros_like(inp2) + assert_almost_equal(np.add(inp1, inp2), exp1, err_msg=msg) + assert_almost_equal(np.add(inp1, 2), exp1 + 2, err_msg=msg) + assert_almost_equal(np.add(1, inp2), exp1, err_msg=msg) + + np.add(inp1, inp2, out=out) + assert_almost_equal(out, exp1, err_msg=msg) + + inp2[...] += np.arange(inp2.size, dtype=dt) + 1 + assert_almost_equal(np.square(inp2), + np.multiply(inp2, inp2), err_msg=msg) + # skip true divide for ints + if dt != np.int32: + assert_almost_equal(np.reciprocal(inp2), + np.divide(1, inp2), err_msg=msg) + + inp1[...] = np.ones_like(inp1) + np.add(inp1, 2, out=out) + assert_almost_equal(out, exp1 + 2, err_msg=msg) + inp2[...] = np.ones_like(inp2) + np.add(2, inp2, out=out) + assert_almost_equal(out, exp1 + 2, err_msg=msg) + + def test_lower_align(self): + # check data that is not aligned to element size + # i.e doubles are aligned to 4 bytes on i386 + d = np.zeros(23 * 8, dtype=np.int8)[4:-4].view(np.float64) + o = np.zeros(23 * 8, dtype=np.int8)[4:-4].view(np.float64) + assert_almost_equal(d + d, d * 2) + np.add(d, d, out=o) + np.add(np.ones_like(d), d, out=o) + np.add(d, np.ones_like(d), out=o) + np.add(np.ones_like(d), d) + np.add(d, np.ones_like(d)) + + +class TestPower: + def test_small_types(self): + for t in [np.int8, np.int16, np.float16]: + a = t(3) + b = a ** 4 + assert_(b == 81, "error with %r: got %r" % (t, b)) + + def test_large_types(self): + for t in [np.int32, np.int64, np.float32, np.float64, np.longdouble]: + a = t(51) + b = a ** 4 + msg = "error with %r: got %r" % (t, b) + if np.issubdtype(t, np.integer): + assert_(b == 6765201, msg) + else: + assert_almost_equal(b, 6765201, err_msg=msg) + + def test_integers_to_negative_integer_power(self): + # Note that the combination of uint64 with a signed integer + # has common type np.float64. The other combinations should all + # raise a ValueError for integer ** negative integer. + exp = [np.array(-1, dt)[()] for dt in 'bhilq'] + + # 1 ** -1 possible special case + base = [np.array(1, dt)[()] for dt in 'bhilqBHILQ'] + for i1, i2 in itertools.product(base, exp): + if i1.dtype != np.uint64: + assert_raises(ValueError, operator.pow, i1, i2) + else: + res = operator.pow(i1, i2) + assert_(res.dtype.type is np.float64) + assert_almost_equal(res, 1.) + + # -1 ** -1 possible special case + base = [np.array(-1, dt)[()] for dt in 'bhilq'] + for i1, i2 in itertools.product(base, exp): + if i1.dtype != np.uint64: + assert_raises(ValueError, operator.pow, i1, i2) + else: + res = operator.pow(i1, i2) + assert_(res.dtype.type is np.float64) + assert_almost_equal(res, -1.) + + # 2 ** -1 perhaps generic + base = [np.array(2, dt)[()] for dt in 'bhilqBHILQ'] + for i1, i2 in itertools.product(base, exp): + if i1.dtype != np.uint64: + assert_raises(ValueError, operator.pow, i1, i2) + else: + res = operator.pow(i1, i2) + assert_(res.dtype.type is np.float64) + assert_almost_equal(res, .5) + + def test_mixed_types(self): + typelist = [np.int8, np.int16, np.float16, + np.float32, np.float64, np.int8, + np.int16, np.int32, np.int64] + for t1 in typelist: + for t2 in typelist: + a = t1(3) + b = t2(2) + result = a**b + msg = ("error with %r and %r:" + "got %r, expected %r") % (t1, t2, result, 9) + if np.issubdtype(np.dtype(result), np.integer): + assert_(result == 9, msg) + else: + assert_almost_equal(result, 9, err_msg=msg) + + def test_modular_power(self): + # modular power is not implemented, so ensure it errors + a = 5 + b = 4 + c = 10 + expected = pow(a, b, c) # noqa: F841 + for t in (np.int32, np.float32, np.complex64): + # note that 3-operand power only dispatches on the first argument + assert_raises(TypeError, operator.pow, t(a), b, c) + assert_raises(TypeError, operator.pow, np.array(t(a)), b, c) + + +def floordiv_and_mod(x, y): + return (x // y, x % y) + + +def _signs(dt): + if dt in np.typecodes['UnsignedInteger']: + return (+1,) + else: + return (+1, -1) + + +class TestModulus: + + def test_modulus_basic(self): + dt = np.typecodes['AllInteger'] + np.typecodes['Float'] + for op in [floordiv_and_mod, divmod]: + for dt1, dt2 in itertools.product(dt, dt): + for sg1, sg2 in itertools.product(_signs(dt1), _signs(dt2)): + fmt = 'op: %s, dt1: %s, dt2: %s, sg1: %s, sg2: %s' + msg = fmt % (op.__name__, dt1, dt2, sg1, sg2) + a = np.array(sg1*71, dtype=dt1)[()] + b = np.array(sg2*19, dtype=dt2)[()] + div, rem = op(a, b) + assert_equal(div*b + rem, a, err_msg=msg) + if sg2 == -1: + assert_(b < rem <= 0, msg) + else: + assert_(b > rem >= 0, msg) + + def test_float_modulus_exact(self): + # test that float results are exact for small integers. This also + # holds for the same integers scaled by powers of two. + nlst = list(range(-127, 0)) + plst = list(range(1, 128)) + dividend = nlst + [0] + plst + divisor = nlst + plst + arg = list(itertools.product(dividend, divisor)) + tgt = list(divmod(*t) for t in arg) + + a, b = np.array(arg, dtype=int).T + # convert exact integer results from Python to float so that + # signed zero can be used, it is checked. + tgtdiv, tgtrem = np.array(tgt, dtype=float).T + tgtdiv = np.where((tgtdiv == 0.0) & ((b < 0) ^ (a < 0)), -0.0, tgtdiv) + tgtrem = np.where((tgtrem == 0.0) & (b < 0), -0.0, tgtrem) + + for op in [floordiv_and_mod, divmod]: + for dt in np.typecodes['Float']: + msg = 'op: %s, dtype: %s' % (op.__name__, dt) + fa = a.astype(dt) + fb = b.astype(dt) + # use list comprehension so a_ and b_ are scalars + div, rem = zip(*[op(a_, b_) for a_, b_ in zip(fa, fb)]) + assert_equal(div, tgtdiv, err_msg=msg) + assert_equal(rem, tgtrem, err_msg=msg) + + def test_float_modulus_roundoff(self): + # gh-6127 + dt = np.typecodes['Float'] + for op in [floordiv_and_mod, divmod]: + for dt1, dt2 in itertools.product(dt, dt): + for sg1, sg2 in itertools.product((+1, -1), (+1, -1)): + fmt = 'op: %s, dt1: %s, dt2: %s, sg1: %s, sg2: %s' + msg = fmt % (op.__name__, dt1, dt2, sg1, sg2) + a = np.array(sg1*78*6e-8, dtype=dt1)[()] + b = np.array(sg2*6e-8, dtype=dt2)[()] + div, rem = op(a, b) + # Equal assertion should hold when fmod is used + assert_equal(div*b + rem, a, err_msg=msg) + if sg2 == -1: + assert_(b < rem <= 0, msg) + else: + assert_(b > rem >= 0, msg) + + def test_float_modulus_corner_cases(self): + # Check remainder magnitude. + for dt in np.typecodes['Float']: + b = np.array(1.0, dtype=dt) + a = np.nextafter(np.array(0.0, dtype=dt), -b) + rem = operator.mod(a, b) + assert_(rem <= b, 'dt: %s' % dt) + rem = operator.mod(-a, -b) + assert_(rem >= -b, 'dt: %s' % dt) + + # Check nans, inf + with suppress_warnings() as sup: + sup.filter(RuntimeWarning, "invalid value encountered in remainder") + sup.filter(RuntimeWarning, "divide by zero encountered in remainder") + sup.filter(RuntimeWarning, "divide by zero encountered in floor_divide") + sup.filter(RuntimeWarning, "divide by zero encountered in divmod") + sup.filter(RuntimeWarning, "invalid value encountered in divmod") + for dt in np.typecodes['Float']: + fone = np.array(1.0, dtype=dt) + fzer = np.array(0.0, dtype=dt) + finf = np.array(np.inf, dtype=dt) + fnan = np.array(np.nan, dtype=dt) + rem = operator.mod(fone, fzer) + assert_(np.isnan(rem), 'dt: %s' % dt) + # MSVC 2008 returns NaN here, so disable the check. + #rem = operator.mod(fone, finf) + #assert_(rem == fone, 'dt: %s' % dt) + rem = operator.mod(fone, fnan) + assert_(np.isnan(rem), 'dt: %s' % dt) + rem = operator.mod(finf, fone) + assert_(np.isnan(rem), 'dt: %s' % dt) + for op in [floordiv_and_mod, divmod]: + div, mod = op(fone, fzer) + assert_(np.isinf(div)) and assert_(np.isnan(mod)) + + def test_inplace_floordiv_handling(self): + # issue gh-12927 + # this only applies to in-place floordiv //=, because the output type + # promotes to float which does not fit + a = np.array([1, 2], np.int64) + b = np.array([1, 2], np.uint64) + with pytest.raises(TypeError, + match=r"Cannot cast ufunc 'floor_divide' output from"): + a //= b + + +class TestComplexDivision: + def test_zero_division(self): + with np.errstate(all="ignore"): + for t in [np.complex64, np.complex128]: + a = t(0.0) + b = t(1.0) + assert_(np.isinf(b/a)) + b = t(complex(np.inf, np.inf)) + assert_(np.isinf(b/a)) + b = t(complex(np.inf, np.nan)) + assert_(np.isinf(b/a)) + b = t(complex(np.nan, np.inf)) + assert_(np.isinf(b/a)) + b = t(complex(np.nan, np.nan)) + assert_(np.isnan(b/a)) + b = t(0.) + assert_(np.isnan(b/a)) + + def test_signed_zeros(self): + with np.errstate(all="ignore"): + for t in [np.complex64, np.complex128]: + # tupled (numerator, denominator, expected) + # for testing as expected == numerator/denominator + data = ( + (( 0.0,-1.0), ( 0.0, 1.0), (-1.0,-0.0)), + (( 0.0,-1.0), ( 0.0,-1.0), ( 1.0,-0.0)), + (( 0.0,-1.0), (-0.0,-1.0), ( 1.0, 0.0)), + (( 0.0,-1.0), (-0.0, 1.0), (-1.0, 0.0)), + (( 0.0, 1.0), ( 0.0,-1.0), (-1.0, 0.0)), + (( 0.0,-1.0), ( 0.0,-1.0), ( 1.0,-0.0)), + ((-0.0,-1.0), ( 0.0,-1.0), ( 1.0,-0.0)), + ((-0.0, 1.0), ( 0.0,-1.0), (-1.0,-0.0)) + ) + for cases in data: + n = cases[0] + d = cases[1] + ex = cases[2] + result = t(complex(n[0], n[1])) / t(complex(d[0], d[1])) + # check real and imag parts separately to avoid comparison + # in array context, which does not account for signed zeros + assert_equal(result.real, ex[0]) + assert_equal(result.imag, ex[1]) + + def test_branches(self): + with np.errstate(all="ignore"): + for t in [np.complex64, np.complex128]: + # tupled (numerator, denominator, expected) + # for testing as expected == numerator/denominator + data = list() + + # trigger branch: real(fabs(denom)) > imag(fabs(denom)) + # followed by else condition as neither are == 0 + data.append((( 2.0, 1.0), ( 2.0, 1.0), (1.0, 0.0))) + + # trigger branch: real(fabs(denom)) > imag(fabs(denom)) + # followed by if condition as both are == 0 + # is performed in test_zero_division(), so this is skipped + + # trigger else if branch: real(fabs(denom)) < imag(fabs(denom)) + data.append((( 1.0, 2.0), ( 1.0, 2.0), (1.0, 0.0))) + + for cases in data: + n = cases[0] + d = cases[1] + ex = cases[2] + result = t(complex(n[0], n[1])) / t(complex(d[0], d[1])) + # check real and imag parts separately to avoid comparison + # in array context, which does not account for signed zeros + assert_equal(result.real, ex[0]) + assert_equal(result.imag, ex[1]) + + +class TestConversion: + def test_int_from_long(self): + l = [1e6, 1e12, 1e18, -1e6, -1e12, -1e18] + li = [10**6, 10**12, 10**18, -10**6, -10**12, -10**18] + for T in [None, np.float64, np.int64]: + a = np.array(l, dtype=T) + assert_equal([int(_m) for _m in a], li) + + a = np.array(l[:3], dtype=np.uint64) + assert_equal([int(_m) for _m in a], li[:3]) + + def test_iinfo_long_values(self): + for code in 'bBhH': + with pytest.raises(OverflowError): + np.array(np.iinfo(code).max + 1, dtype=code) + + for code in np.typecodes['AllInteger']: + res = np.array(np.iinfo(code).max, dtype=code) + tgt = np.iinfo(code).max + assert_(res == tgt) + + for code in np.typecodes['AllInteger']: + res = np.dtype(code).type(np.iinfo(code).max) + tgt = np.iinfo(code).max + assert_(res == tgt) + + def test_int_raise_behaviour(self): + def overflow_error_func(dtype): + dtype(np.iinfo(dtype).max + 1) + + for code in [np.int_, np.uint, np.longlong, np.ulonglong]: + assert_raises(OverflowError, overflow_error_func, code) + + def test_int_from_infinite_longdouble(self): + # gh-627 + x = np.longdouble(np.inf) + assert_raises(OverflowError, int, x) + with suppress_warnings() as sup: + sup.record(ComplexWarning) + x = np.clongdouble(np.inf) + assert_raises(OverflowError, int, x) + assert_equal(len(sup.log), 1) + + @pytest.mark.skipif(not IS_PYPY, reason="Test is PyPy only (gh-9972)") + def test_int_from_infinite_longdouble___int__(self): + x = np.longdouble(np.inf) + assert_raises(OverflowError, x.__int__) + with suppress_warnings() as sup: + sup.record(ComplexWarning) + x = np.clongdouble(np.inf) + assert_raises(OverflowError, x.__int__) + assert_equal(len(sup.log), 1) + + @pytest.mark.skipif(np.finfo(np.double) == np.finfo(np.longdouble), + reason="long double is same as double") + @pytest.mark.skipif(platform.machine().startswith("ppc"), + reason="IBM double double") + def test_int_from_huge_longdouble(self): + # Produce a longdouble that would overflow a double, + # use exponent that avoids bug in Darwin pow function. + exp = np.finfo(np.double).maxexp - 1 + huge_ld = 2 * 1234 * np.longdouble(2) ** exp + huge_i = 2 * 1234 * 2 ** exp + assert_(huge_ld != np.inf) + assert_equal(int(huge_ld), huge_i) + + def test_int_from_longdouble(self): + x = np.longdouble(1.5) + assert_equal(int(x), 1) + x = np.longdouble(-10.5) + assert_equal(int(x), -10) + + def test_numpy_scalar_relational_operators(self): + # All integer + for dt1 in np.typecodes['AllInteger']: + assert_(1 > np.array(0, dtype=dt1)[()], "type %s failed" % (dt1,)) + assert_(not 1 < np.array(0, dtype=dt1)[()], "type %s failed" % (dt1,)) + + for dt2 in np.typecodes['AllInteger']: + assert_(np.array(1, dtype=dt1)[()] > np.array(0, dtype=dt2)[()], + "type %s and %s failed" % (dt1, dt2)) + assert_(not np.array(1, dtype=dt1)[()] < np.array(0, dtype=dt2)[()], + "type %s and %s failed" % (dt1, dt2)) + + #Unsigned integers + for dt1 in 'BHILQP': + assert_(-1 < np.array(1, dtype=dt1)[()], "type %s failed" % (dt1,)) + assert_(not -1 > np.array(1, dtype=dt1)[()], "type %s failed" % (dt1,)) + assert_(-1 != np.array(1, dtype=dt1)[()], "type %s failed" % (dt1,)) + + #unsigned vs signed + for dt2 in 'bhilqp': + assert_(np.array(1, dtype=dt1)[()] > np.array(-1, dtype=dt2)[()], + "type %s and %s failed" % (dt1, dt2)) + assert_(not np.array(1, dtype=dt1)[()] < np.array(-1, dtype=dt2)[()], + "type %s and %s failed" % (dt1, dt2)) + assert_(np.array(1, dtype=dt1)[()] != np.array(-1, dtype=dt2)[()], + "type %s and %s failed" % (dt1, dt2)) + + #Signed integers and floats + for dt1 in 'bhlqp' + np.typecodes['Float']: + assert_(1 > np.array(-1, dtype=dt1)[()], "type %s failed" % (dt1,)) + assert_(not 1 < np.array(-1, dtype=dt1)[()], "type %s failed" % (dt1,)) + assert_(-1 == np.array(-1, dtype=dt1)[()], "type %s failed" % (dt1,)) + + for dt2 in 'bhlqp' + np.typecodes['Float']: + assert_(np.array(1, dtype=dt1)[()] > np.array(-1, dtype=dt2)[()], + "type %s and %s failed" % (dt1, dt2)) + assert_(not np.array(1, dtype=dt1)[()] < np.array(-1, dtype=dt2)[()], + "type %s and %s failed" % (dt1, dt2)) + assert_(np.array(-1, dtype=dt1)[()] == np.array(-1, dtype=dt2)[()], + "type %s and %s failed" % (dt1, dt2)) + + def test_scalar_comparison_to_none(self): + # Scalars should just return False and not give a warnings. + # The comparisons are flagged by pep8, ignore that. + with warnings.catch_warnings(record=True) as w: + warnings.filterwarnings('always', '', FutureWarning) + assert_(not np.float32(1) == None) + assert_(not np.str_('test') == None) + # This is dubious (see below): + assert_(not np.datetime64('NaT') == None) + + assert_(np.float32(1) != None) + assert_(np.str_('test') != None) + # This is dubious (see below): + assert_(np.datetime64('NaT') != None) + assert_(len(w) == 0) + + # For documentation purposes, this is why the datetime is dubious. + # At the time of deprecation this was no behaviour change, but + # it has to be considered when the deprecations are done. + assert_(np.equal(np.datetime64('NaT'), None)) + + +#class TestRepr: +# def test_repr(self): +# for t in types: +# val = t(1197346475.0137341) +# val_repr = repr(val) +# val2 = eval(val_repr) +# assert_equal( val, val2 ) + + +class TestRepr: + def _test_type_repr(self, t): + finfo = np.finfo(t) + last_fraction_bit_idx = finfo.nexp + finfo.nmant + last_exponent_bit_idx = finfo.nexp + storage_bytes = np.dtype(t).itemsize*8 + # could add some more types to the list below + for which in ['small denorm', 'small norm']: + # Values from https://en.wikipedia.org/wiki/IEEE_754 + constr = np.array([0x00]*storage_bytes, dtype=np.uint8) + if which == 'small denorm': + byte = last_fraction_bit_idx // 8 + bytebit = 7-(last_fraction_bit_idx % 8) + constr[byte] = 1 << bytebit + elif which == 'small norm': + byte = last_exponent_bit_idx // 8 + bytebit = 7-(last_exponent_bit_idx % 8) + constr[byte] = 1 << bytebit + else: + raise ValueError('hmm') + val = constr.view(t)[0] + val_repr = repr(val) + val2 = t(eval(val_repr)) + if not (val2 == 0 and val < 1e-100): + assert_equal(val, val2) + + def test_float_repr(self): + # long double test cannot work, because eval goes through a python + # float + for t in [np.float32, np.float64]: + self._test_type_repr(t) + + +if not IS_PYPY: + # sys.getsizeof() is not valid on PyPy + class TestSizeOf: + + def test_equal_nbytes(self): + for type in types: + x = type(0) + assert_(sys.getsizeof(x) > x.nbytes) + + def test_error(self): + d = np.float32() + assert_raises(TypeError, d.__sizeof__, "a") + + +class TestMultiply: + def test_seq_repeat(self): + # Test that basic sequences get repeated when multiplied with + # numpy integers. And errors are raised when multiplied with others. + # Some of this behaviour may be controversial and could be open for + # change. + accepted_types = set(np.typecodes["AllInteger"]) + deprecated_types = {'?'} + forbidden_types = ( + set(np.typecodes["All"]) - accepted_types - deprecated_types) + forbidden_types -= {'V'} # can't default-construct void scalars + + for seq_type in (list, tuple): + seq = seq_type([1, 2, 3]) + for numpy_type in accepted_types: + i = np.dtype(numpy_type).type(2) + assert_equal(seq * i, seq * int(i)) + assert_equal(i * seq, int(i) * seq) + + for numpy_type in deprecated_types: + i = np.dtype(numpy_type).type() + assert_equal( + assert_warns(DeprecationWarning, operator.mul, seq, i), + seq * int(i)) + assert_equal( + assert_warns(DeprecationWarning, operator.mul, i, seq), + int(i) * seq) + + for numpy_type in forbidden_types: + i = np.dtype(numpy_type).type() + assert_raises(TypeError, operator.mul, seq, i) + assert_raises(TypeError, operator.mul, i, seq) + + def test_no_seq_repeat_basic_array_like(self): + # Test that an array-like which does not know how to be multiplied + # does not attempt sequence repeat (raise TypeError). + # See also gh-7428. + class ArrayLike: + def __init__(self, arr): + self.arr = arr + + def __array__(self, dtype=None, copy=None): + return self.arr + + # Test for simple ArrayLike above and memoryviews (original report) + for arr_like in (ArrayLike(np.ones(3)), memoryview(np.ones(3))): + assert_array_equal(arr_like * np.float32(3.), np.full(3, 3.)) + assert_array_equal(np.float32(3.) * arr_like, np.full(3, 3.)) + assert_array_equal(arr_like * np.int_(3), np.full(3, 3)) + assert_array_equal(np.int_(3) * arr_like, np.full(3, 3)) + + +class TestNegative: + def test_exceptions(self): + a = np.ones((), dtype=np.bool)[()] + assert_raises(TypeError, operator.neg, a) + + def test_result(self): + types = np.typecodes['AllInteger'] + np.typecodes['AllFloat'] + with suppress_warnings() as sup: + sup.filter(RuntimeWarning) + for dt in types: + a = np.ones((), dtype=dt)[()] + if dt in np.typecodes['UnsignedInteger']: + st = np.dtype(dt).type + max = st(np.iinfo(dt).max) + assert_equal(operator.neg(a), max) + else: + assert_equal(operator.neg(a) + a, 0) + +class TestSubtract: + def test_exceptions(self): + a = np.ones((), dtype=np.bool)[()] + assert_raises(TypeError, operator.sub, a, a) + + def test_result(self): + types = np.typecodes['AllInteger'] + np.typecodes['AllFloat'] + with suppress_warnings() as sup: + sup.filter(RuntimeWarning) + for dt in types: + a = np.ones((), dtype=dt)[()] + assert_equal(operator.sub(a, a), 0) + + +class TestAbs: + def _test_abs_func(self, absfunc, test_dtype): + x = test_dtype(-1.5) + assert_equal(absfunc(x), 1.5) + x = test_dtype(0.0) + res = absfunc(x) + # assert_equal() checks zero signedness + assert_equal(res, 0.0) + x = test_dtype(-0.0) + res = absfunc(x) + assert_equal(res, 0.0) + + x = test_dtype(np.finfo(test_dtype).max) + assert_equal(absfunc(x), x.real) + + with suppress_warnings() as sup: + sup.filter(UserWarning) + x = test_dtype(np.finfo(test_dtype).tiny) + assert_equal(absfunc(x), x.real) + + x = test_dtype(np.finfo(test_dtype).min) + assert_equal(absfunc(x), -x.real) + + @pytest.mark.parametrize("dtype", floating_types + complex_floating_types) + def test_builtin_abs(self, dtype): + if ( + sys.platform == "cygwin" and dtype == np.clongdouble and + ( + _pep440.parse(platform.release().split("-")[0]) + < _pep440.Version("3.3.0") + ) + ): + pytest.xfail( + reason="absl is computed in double precision on cygwin < 3.3" + ) + self._test_abs_func(abs, dtype) + + @pytest.mark.parametrize("dtype", floating_types + complex_floating_types) + def test_numpy_abs(self, dtype): + if ( + sys.platform == "cygwin" and dtype == np.clongdouble and + ( + _pep440.parse(platform.release().split("-")[0]) + < _pep440.Version("3.3.0") + ) + ): + pytest.xfail( + reason="absl is computed in double precision on cygwin < 3.3" + ) + self._test_abs_func(np.abs, dtype) + +class TestBitShifts: + + @pytest.mark.parametrize('type_code', np.typecodes['AllInteger']) + @pytest.mark.parametrize('op', + [operator.rshift, operator.lshift], ids=['>>', '<<']) + def test_shift_all_bits(self, type_code, op): + """Shifts where the shift amount is the width of the type or wider """ + if ( + USING_CLANG_CL and + type_code in ("l", "L") and + op is operator.lshift + ): + pytest.xfail("Failing on clang-cl builds") + # gh-2449 + dt = np.dtype(type_code) + nbits = dt.itemsize * 8 + for val in [5, -5]: + for shift in [nbits, nbits + 4]: + val_scl = np.array(val).astype(dt)[()] + shift_scl = dt.type(shift) + res_scl = op(val_scl, shift_scl) + if val_scl < 0 and op is operator.rshift: + # sign bit is preserved + assert_equal(res_scl, -1) + else: + assert_equal(res_scl, 0) + + # Result on scalars should be the same as on arrays + val_arr = np.array([val_scl]*32, dtype=dt) + shift_arr = np.array([shift]*32, dtype=dt) + res_arr = op(val_arr, shift_arr) + assert_equal(res_arr, res_scl) + + +class TestHash: + @pytest.mark.parametrize("type_code", np.typecodes['AllInteger']) + def test_integer_hashes(self, type_code): + scalar = np.dtype(type_code).type + for i in range(128): + assert hash(i) == hash(scalar(i)) + + @pytest.mark.parametrize("type_code", np.typecodes['AllFloat']) + def test_float_and_complex_hashes(self, type_code): + scalar = np.dtype(type_code).type + for val in [np.pi, np.inf, 3, 6.]: + numpy_val = scalar(val) + # Cast back to Python, in case the NumPy scalar has less precision + if numpy_val.dtype.kind == 'c': + val = complex(numpy_val) + else: + val = float(numpy_val) + assert val == numpy_val + assert hash(val) == hash(numpy_val) + + if hash(float(np.nan)) != hash(float(np.nan)): + # If Python distinguishes different NaNs we do so too (gh-18833) + assert hash(scalar(np.nan)) != hash(scalar(np.nan)) + + @pytest.mark.parametrize("type_code", np.typecodes['Complex']) + def test_complex_hashes(self, type_code): + # Test some complex valued hashes specifically: + scalar = np.dtype(type_code).type + for val in [np.pi+1j, np.inf-3j, 3j, 6.+1j]: + numpy_val = scalar(val) + assert hash(complex(numpy_val)) == hash(numpy_val) + + +@contextlib.contextmanager +def recursionlimit(n): + o = sys.getrecursionlimit() + try: + sys.setrecursionlimit(n) + yield + finally: + sys.setrecursionlimit(o) + + +@given(sampled_from(objecty_things), + sampled_from(reasonable_operators_for_scalars), + sampled_from(types)) +def test_operator_object_left(o, op, type_): + try: + with recursionlimit(200): + op(o, type_(1)) + except TypeError: + pass + + +@given(sampled_from(objecty_things), + sampled_from(reasonable_operators_for_scalars), + sampled_from(types)) +def test_operator_object_right(o, op, type_): + try: + with recursionlimit(200): + op(type_(1), o) + except TypeError: + pass + + +@given(sampled_from(reasonable_operators_for_scalars), + sampled_from(types), + sampled_from(types)) +def test_operator_scalars(op, type1, type2): + try: + op(type1(1), type2(1)) + except TypeError: + pass + + +@pytest.mark.parametrize("op", reasonable_operators_for_scalars) +@pytest.mark.parametrize("sctype", [np.longdouble, np.clongdouble]) +def test_longdouble_operators_with_obj(sctype, op): + # This is/used to be tricky, because NumPy generally falls back to + # using the ufunc via `np.asarray()`, this effectively might do: + # longdouble + None + # -> asarray(longdouble) + np.array(None, dtype=object) + # -> asarray(longdouble).astype(object) + np.array(None, dtype=object) + # And after getting the scalars in the inner loop: + # -> longdouble + None + # + # That would recurse infinitely. Other scalars return the python object + # on cast, so this type of things works OK. + try: + op(sctype(3), None) + except TypeError: + pass + try: + op(None, sctype(3)) + except TypeError: + pass + + +@pytest.mark.parametrize("op", reasonable_operators_for_scalars) +@pytest.mark.parametrize("sctype", [np.longdouble, np.clongdouble]) +@np.errstate(all="ignore") +def test_longdouble_operators_with_large_int(sctype, op): + # (See `test_longdouble_operators_with_obj` for why longdouble is special) + # NEP 50 means that the result is clearly a (c)longdouble here: + if sctype == np.clongdouble and op in [operator.mod, operator.floordiv]: + # The above operators are not support for complex though... + with pytest.raises(TypeError): + op(sctype(3), 2**64) + with pytest.raises(TypeError): + op(sctype(3), 2**64) + else: + assert op(sctype(3), -2**64) == op(sctype(3), sctype(-2**64)) + assert op(2**64, sctype(3)) == op(sctype(2**64), sctype(3)) + + +@pytest.mark.parametrize("dtype", np.typecodes["AllInteger"]) +@pytest.mark.parametrize("operation", [ + lambda min, max: max + max, + lambda min, max: min - max, + lambda min, max: max * max], ids=["+", "-", "*"]) +def test_scalar_integer_operation_overflow(dtype, operation): + st = np.dtype(dtype).type + min = st(np.iinfo(dtype).min) + max = st(np.iinfo(dtype).max) + + with pytest.warns(RuntimeWarning, match="overflow encountered"): + operation(min, max) + + +@pytest.mark.parametrize("dtype", np.typecodes["Integer"]) +@pytest.mark.parametrize("operation", [ + lambda min, neg_1: -min, + lambda min, neg_1: abs(min), + lambda min, neg_1: min * neg_1, + pytest.param(lambda min, neg_1: min // neg_1, + marks=pytest.mark.skip(reason="broken on some platforms"))], + ids=["neg", "abs", "*", "//"]) +def test_scalar_signed_integer_overflow(dtype, operation): + # The minimum signed integer can "overflow" for some additional operations + st = np.dtype(dtype).type + min = st(np.iinfo(dtype).min) + neg_1 = st(-1) + + with pytest.warns(RuntimeWarning, match="overflow encountered"): + operation(min, neg_1) + + +@pytest.mark.parametrize("dtype", np.typecodes["UnsignedInteger"]) +def test_scalar_unsigned_integer_overflow(dtype): + val = np.dtype(dtype).type(8) + with pytest.warns(RuntimeWarning, match="overflow encountered"): + -val + + zero = np.dtype(dtype).type(0) + -zero # does not warn + +@pytest.mark.parametrize("dtype", np.typecodes["AllInteger"]) +@pytest.mark.parametrize("operation", [ + lambda val, zero: val // zero, + lambda val, zero: val % zero, ], ids=["//", "%"]) +def test_scalar_integer_operation_divbyzero(dtype, operation): + st = np.dtype(dtype).type + val = st(100) + zero = st(0) + + with pytest.warns(RuntimeWarning, match="divide by zero"): + operation(val, zero) + + +ops_with_names = [ + ("__lt__", "__gt__", operator.lt, True), + ("__le__", "__ge__", operator.le, True), + ("__eq__", "__eq__", operator.eq, True), + # Note __op__ and __rop__ may be identical here: + ("__ne__", "__ne__", operator.ne, True), + ("__gt__", "__lt__", operator.gt, True), + ("__ge__", "__le__", operator.ge, True), + ("__floordiv__", "__rfloordiv__", operator.floordiv, False), + ("__truediv__", "__rtruediv__", operator.truediv, False), + ("__add__", "__radd__", operator.add, False), + ("__mod__", "__rmod__", operator.mod, False), + ("__mul__", "__rmul__", operator.mul, False), + ("__pow__", "__rpow__", operator.pow, False), + ("__sub__", "__rsub__", operator.sub, False), +] + + +@pytest.mark.parametrize(["__op__", "__rop__", "op", "cmp"], ops_with_names) +@pytest.mark.parametrize("sctype", [np.float32, np.float64, np.longdouble]) +def test_subclass_deferral(sctype, __op__, __rop__, op, cmp): + """ + This test covers scalar subclass deferral. Note that this is exceedingly + complicated, especially since it tends to fall back to the array paths and + these additionally add the "array priority" mechanism. + + The behaviour was modified subtly in 1.22 (to make it closer to how Python + scalars work). Due to its complexity and the fact that subclassing NumPy + scalars is probably a bad idea to begin with. There is probably room + for adjustments here. + """ + class myf_simple1(sctype): + pass + + class myf_simple2(sctype): + pass + + def op_func(self, other): + return __op__ + + def rop_func(self, other): + return __rop__ + + myf_op = type("myf_op", (sctype,), {__op__: op_func, __rop__: rop_func}) + + # inheritance has to override, or this is correctly lost: + res = op(myf_simple1(1), myf_simple2(2)) + assert type(res) == sctype or type(res) == np.bool + assert op(myf_simple1(1), myf_simple2(2)) == op(1, 2) # inherited + + # Two independent subclasses do not really define an order. This could + # be attempted, but we do not since Python's `int` does neither: + assert op(myf_op(1), myf_simple1(2)) == __op__ + assert op(myf_simple1(1), myf_op(2)) == op(1, 2) # inherited + + +def test_longdouble_complex(): + # Simple test to check longdouble and complex combinations, since these + # need to go through promotion, which longdouble needs to be careful about. + x = np.longdouble(1) + assert x + 1j == 1+1j + assert 1j + x == 1+1j + + +@pytest.mark.parametrize(["__op__", "__rop__", "op", "cmp"], ops_with_names) +@pytest.mark.parametrize("subtype", [float, int, complex, np.float16]) +@np._no_nep50_warning() +def test_pyscalar_subclasses(subtype, __op__, __rop__, op, cmp): + def op_func(self, other): + return __op__ + + def rop_func(self, other): + return __rop__ + + # Check that deferring is indicated using `__array_ufunc__`: + myt = type("myt", (subtype,), + {__op__: op_func, __rop__: rop_func, "__array_ufunc__": None}) + + # Just like normally, we should never presume we can modify the float. + assert op(myt(1), np.float64(2)) == __op__ + assert op(np.float64(1), myt(2)) == __rop__ + + if op in {operator.mod, operator.floordiv} and subtype == complex: + return # module is not support for complex. Do not test. + + if __rop__ == __op__: + return + + # When no deferring is indicated, subclasses are handled normally. + myt = type("myt", (subtype,), {__rop__: rop_func}) + + # Check for float32, as a float subclass float64 may behave differently + res = op(myt(1), np.float16(2)) + expected = op(subtype(1), np.float16(2)) + assert res == expected + assert type(res) == type(expected) + res = op(np.float32(2), myt(1)) + expected = op(np.float32(2), subtype(1)) + assert res == expected + assert type(res) == type(expected) + + # Same check for longdouble: + res = op(myt(1), np.longdouble(2)) + expected = op(subtype(1), np.longdouble(2)) + assert res == expected + assert type(res) == type(expected) + res = op(np.float32(2), myt(1)) + expected = op(np.longdouble(2), subtype(1)) + assert res == expected + + +def test_truediv_int(): + # This should work, as the result is float: + assert np.uint8(3) / 123454 == np.float64(3) / 123454 + + +@pytest.mark.slow +@pytest.mark.parametrize("op", + # TODO: Power is a bit special, but here mostly bools seem to behave oddly + [op for op in reasonable_operators_for_scalars if op is not operator.pow]) +@pytest.mark.parametrize("sctype", types) +@pytest.mark.parametrize("other_type", [float, int, complex]) +@pytest.mark.parametrize("rop", [True, False]) +def test_scalar_matches_array_op_with_pyscalar(op, sctype, other_type, rop): + # Check that the ufunc path matches by coercing to an array explicitly + val1 = sctype(2) + val2 = other_type(2) + + if rop: + _op = op + op = lambda x, y: _op(y, x) + + try: + res = op(val1, val2) + except TypeError: + try: + expected = op(np.asarray(val1), val2) + raise AssertionError("ufunc didn't raise.") + except TypeError: + return + else: + expected = op(np.asarray(val1), val2) + + # Note that we only check dtype equivalency, as ufuncs may pick the lower + # dtype if they are equivalent. + assert res == expected + if isinstance(val1, float) and other_type is complex and rop: + # Python complex accepts float subclasses, so we don't get a chance + # and the result may be a Python complelx (thus, the `np.array()``) + assert np.array(res).dtype == expected.dtype + else: + assert res.dtype == expected.dtype diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarprint.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarprint.py new file mode 100644 index 0000000000000000000000000000000000000000..f47542ef779c077e025e81341ec6a981460a1842 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_scalarprint.py @@ -0,0 +1,382 @@ +""" Test printing of scalar types. + +""" +import code +import platform +import pytest +import sys + +from tempfile import TemporaryFile +import numpy as np +from numpy.testing import assert_, assert_equal, assert_raises, IS_MUSL + +class TestRealScalars: + def test_str(self): + svals = [0.0, -0.0, 1, -1, np.inf, -np.inf, np.nan] + styps = [np.float16, np.float32, np.float64, np.longdouble] + wanted = [ + ['0.0', '0.0', '0.0', '0.0' ], + ['-0.0', '-0.0', '-0.0', '-0.0'], + ['1.0', '1.0', '1.0', '1.0' ], + ['-1.0', '-1.0', '-1.0', '-1.0'], + ['inf', 'inf', 'inf', 'inf' ], + ['-inf', '-inf', '-inf', '-inf'], + ['nan', 'nan', 'nan', 'nan']] + + for wants, val in zip(wanted, svals): + for want, styp in zip(wants, styps): + msg = 'for str({}({}))'.format(np.dtype(styp).name, repr(val)) + assert_equal(str(styp(val)), want, err_msg=msg) + + def test_scalar_cutoffs(self): + # test that both the str and repr of np.float64 behaves + # like python floats in python3. + def check(v): + assert_equal(str(np.float64(v)), str(v)) + assert_equal(str(np.float64(v)), repr(v)) + assert_equal(repr(np.float64(v)), f"np.float64({v!r})") + assert_equal(repr(np.float64(v)), f"np.float64({v})") + + # check we use the same number of significant digits + check(1.12345678901234567890) + check(0.0112345678901234567890) + + # check switch from scientific output to positional and back + check(1e-5) + check(1e-4) + check(1e15) + check(1e16) + + def test_py2_float_print(self): + # gh-10753 + # In python2, the python float type implements an obsolete method + # tp_print, which overrides tp_repr and tp_str when using "print" to + # output to a "real file" (ie, not a StringIO). Make sure we don't + # inherit it. + x = np.double(0.1999999999999) + with TemporaryFile('r+t') as f: + print(x, file=f) + f.seek(0) + output = f.read() + assert_equal(output, str(x) + '\n') + # In python2 the value float('0.1999999999999') prints with reduced + # precision as '0.2', but we want numpy's np.double('0.1999999999999') + # to print the unique value, '0.1999999999999'. + + # gh-11031 + # Only in the python2 interactive shell and when stdout is a "real" + # file, the output of the last command is printed to stdout without + # Py_PRINT_RAW (unlike the print statement) so `>>> x` and `>>> print + # x` are potentially different. Make sure they are the same. The only + # way I found to get prompt-like output is using an actual prompt from + # the 'code' module. Again, must use tempfile to get a "real" file. + + # dummy user-input which enters one line and then ctrl-Ds. + def userinput(): + yield 'np.sqrt(2)' + raise EOFError + gen = userinput() + input_func = lambda prompt="": next(gen) + + with TemporaryFile('r+t') as fo, TemporaryFile('r+t') as fe: + orig_stdout, orig_stderr = sys.stdout, sys.stderr + sys.stdout, sys.stderr = fo, fe + + code.interact(local={'np': np}, readfunc=input_func, banner='') + + sys.stdout, sys.stderr = orig_stdout, orig_stderr + + fo.seek(0) + capture = fo.read().strip() + + assert_equal(capture, repr(np.sqrt(2))) + + def test_dragon4(self): + # these tests are adapted from Ryan Juckett's dragon4 implementation, + # see dragon4.c for details. + + fpos32 = lambda x, **k: np.format_float_positional(np.float32(x), **k) + fsci32 = lambda x, **k: np.format_float_scientific(np.float32(x), **k) + fpos64 = lambda x, **k: np.format_float_positional(np.float64(x), **k) + fsci64 = lambda x, **k: np.format_float_scientific(np.float64(x), **k) + + preckwd = lambda prec: {'unique': False, 'precision': prec} + + assert_equal(fpos32('1.0'), "1.") + assert_equal(fsci32('1.0'), "1.e+00") + assert_equal(fpos32('10.234'), "10.234") + assert_equal(fpos32('-10.234'), "-10.234") + assert_equal(fsci32('10.234'), "1.0234e+01") + assert_equal(fsci32('-10.234'), "-1.0234e+01") + assert_equal(fpos32('1000.0'), "1000.") + assert_equal(fpos32('1.0', precision=0), "1.") + assert_equal(fsci32('1.0', precision=0), "1.e+00") + assert_equal(fpos32('10.234', precision=0), "10.") + assert_equal(fpos32('-10.234', precision=0), "-10.") + assert_equal(fsci32('10.234', precision=0), "1.e+01") + assert_equal(fsci32('-10.234', precision=0), "-1.e+01") + assert_equal(fpos32('10.234', precision=2), "10.23") + assert_equal(fsci32('-10.234', precision=2), "-1.02e+01") + assert_equal(fsci64('9.9999999999999995e-08', **preckwd(16)), + '9.9999999999999995e-08') + assert_equal(fsci64('9.8813129168249309e-324', **preckwd(16)), + '9.8813129168249309e-324') + assert_equal(fsci64('9.9999999999999694e-311', **preckwd(16)), + '9.9999999999999694e-311') + + + # test rounding + # 3.1415927410 is closest float32 to np.pi + assert_equal(fpos32('3.14159265358979323846', **preckwd(10)), + "3.1415927410") + assert_equal(fsci32('3.14159265358979323846', **preckwd(10)), + "3.1415927410e+00") + assert_equal(fpos64('3.14159265358979323846', **preckwd(10)), + "3.1415926536") + assert_equal(fsci64('3.14159265358979323846', **preckwd(10)), + "3.1415926536e+00") + # 299792448 is closest float32 to 299792458 + assert_equal(fpos32('299792458.0', **preckwd(5)), "299792448.00000") + assert_equal(fsci32('299792458.0', **preckwd(5)), "2.99792e+08") + assert_equal(fpos64('299792458.0', **preckwd(5)), "299792458.00000") + assert_equal(fsci64('299792458.0', **preckwd(5)), "2.99792e+08") + + assert_equal(fpos32('3.14159265358979323846', **preckwd(25)), + "3.1415927410125732421875000") + assert_equal(fpos64('3.14159265358979323846', **preckwd(50)), + "3.14159265358979311599796346854418516159057617187500") + assert_equal(fpos64('3.14159265358979323846'), "3.141592653589793") + + + # smallest numbers + assert_equal(fpos32(0.5**(126 + 23), unique=False, precision=149), + "0.00000000000000000000000000000000000000000000140129846432" + "4817070923729583289916131280261941876515771757068283889791" + "08268586060148663818836212158203125") + + assert_equal(fpos64(5e-324, unique=False, precision=1074), + "0.00000000000000000000000000000000000000000000000000000000" + "0000000000000000000000000000000000000000000000000000000000" + "0000000000000000000000000000000000000000000000000000000000" + "0000000000000000000000000000000000000000000000000000000000" + "0000000000000000000000000000000000000000000000000000000000" + "0000000000000000000000000000000000049406564584124654417656" + "8792868221372365059802614324764425585682500675507270208751" + "8652998363616359923797965646954457177309266567103559397963" + "9877479601078187812630071319031140452784581716784898210368" + "8718636056998730723050006387409153564984387312473397273169" + "6151400317153853980741262385655911710266585566867681870395" + "6031062493194527159149245532930545654440112748012970999954" + "1931989409080416563324524757147869014726780159355238611550" + "1348035264934720193790268107107491703332226844753335720832" + "4319360923828934583680601060115061698097530783422773183292" + "4790498252473077637592724787465608477820373446969953364701" + "7972677717585125660551199131504891101451037862738167250955" + "8373897335989936648099411642057026370902792427675445652290" + "87538682506419718265533447265625") + + # largest numbers + f32x = np.finfo(np.float32).max + assert_equal(fpos32(f32x, **preckwd(0)), + "340282346638528859811704183484516925440.") + assert_equal(fpos64(np.finfo(np.float64).max, **preckwd(0)), + "1797693134862315708145274237317043567980705675258449965989" + "1747680315726078002853876058955863276687817154045895351438" + "2464234321326889464182768467546703537516986049910576551282" + "0762454900903893289440758685084551339423045832369032229481" + "6580855933212334827479782620414472316873817718091929988125" + "0404026184124858368.") + # Warning: In unique mode only the integer digits necessary for + # uniqueness are computed, the rest are 0. + assert_equal(fpos32(f32x), + "340282350000000000000000000000000000000.") + + # Further tests of zero-padding vs rounding in different combinations + # of unique, fractional, precision, min_digits + # precision can only reduce digits, not add them. + # min_digits can only extend digits, not reduce them. + assert_equal(fpos32(f32x, unique=True, fractional=True, precision=0), + "340282350000000000000000000000000000000.") + assert_equal(fpos32(f32x, unique=True, fractional=True, precision=4), + "340282350000000000000000000000000000000.") + assert_equal(fpos32(f32x, unique=True, fractional=True, min_digits=0), + "340282346638528859811704183484516925440.") + assert_equal(fpos32(f32x, unique=True, fractional=True, min_digits=4), + "340282346638528859811704183484516925440.0000") + assert_equal(fpos32(f32x, unique=True, fractional=True, + min_digits=4, precision=4), + "340282346638528859811704183484516925440.0000") + assert_raises(ValueError, fpos32, f32x, unique=True, fractional=False, + precision=0) + assert_equal(fpos32(f32x, unique=True, fractional=False, precision=4), + "340300000000000000000000000000000000000.") + assert_equal(fpos32(f32x, unique=True, fractional=False, precision=20), + "340282350000000000000000000000000000000.") + assert_equal(fpos32(f32x, unique=True, fractional=False, min_digits=4), + "340282350000000000000000000000000000000.") + assert_equal(fpos32(f32x, unique=True, fractional=False, + min_digits=20), + "340282346638528859810000000000000000000.") + assert_equal(fpos32(f32x, unique=True, fractional=False, + min_digits=15), + "340282346638529000000000000000000000000.") + assert_equal(fpos32(f32x, unique=False, fractional=False, precision=4), + "340300000000000000000000000000000000000.") + # test that unique rounding is preserved when precision is supplied + # but no extra digits need to be printed (gh-18609) + a = np.float64.fromhex('-1p-97') + assert_equal(fsci64(a, unique=True), '-6.310887241768095e-30') + assert_equal(fsci64(a, unique=False, precision=15), + '-6.310887241768094e-30') + assert_equal(fsci64(a, unique=True, precision=15), + '-6.310887241768095e-30') + assert_equal(fsci64(a, unique=True, min_digits=15), + '-6.310887241768095e-30') + assert_equal(fsci64(a, unique=True, precision=15, min_digits=15), + '-6.310887241768095e-30') + # adds/remove digits in unique mode with unbiased rnding + assert_equal(fsci64(a, unique=True, precision=14), + '-6.31088724176809e-30') + assert_equal(fsci64(a, unique=True, min_digits=16), + '-6.3108872417680944e-30') + assert_equal(fsci64(a, unique=True, precision=16), + '-6.310887241768095e-30') + assert_equal(fsci64(a, unique=True, min_digits=14), + '-6.310887241768095e-30') + # test min_digits in unique mode with different rounding cases + assert_equal(fsci64('1e120', min_digits=3), '1.000e+120') + assert_equal(fsci64('1e100', min_digits=3), '1.000e+100') + + # test trailing zeros + assert_equal(fpos32('1.0', unique=False, precision=3), "1.000") + assert_equal(fpos64('1.0', unique=False, precision=3), "1.000") + assert_equal(fsci32('1.0', unique=False, precision=3), "1.000e+00") + assert_equal(fsci64('1.0', unique=False, precision=3), "1.000e+00") + assert_equal(fpos32('1.5', unique=False, precision=3), "1.500") + assert_equal(fpos64('1.5', unique=False, precision=3), "1.500") + assert_equal(fsci32('1.5', unique=False, precision=3), "1.500e+00") + assert_equal(fsci64('1.5', unique=False, precision=3), "1.500e+00") + # gh-10713 + assert_equal(fpos64('324', unique=False, precision=5, + fractional=False), "324.00") + + def test_dragon4_interface(self): + tps = [np.float16, np.float32, np.float64] + # test is flaky for musllinux on np.float128 + if hasattr(np, 'float128') and not IS_MUSL: + tps.append(np.float128) + + fpos = np.format_float_positional + fsci = np.format_float_scientific + + for tp in tps: + # test padding + assert_equal(fpos(tp('1.0'), pad_left=4, pad_right=4), " 1. ") + assert_equal(fpos(tp('-1.0'), pad_left=4, pad_right=4), " -1. ") + assert_equal(fpos(tp('-10.2'), + pad_left=4, pad_right=4), " -10.2 ") + + # test exp_digits + assert_equal(fsci(tp('1.23e1'), exp_digits=5), "1.23e+00001") + + # test fixed (non-unique) mode + assert_equal(fpos(tp('1.0'), unique=False, precision=4), "1.0000") + assert_equal(fsci(tp('1.0'), unique=False, precision=4), + "1.0000e+00") + + # test trimming + # trim of 'k' or '.' only affects non-unique mode, since unique + # mode will not output trailing 0s. + assert_equal(fpos(tp('1.'), unique=False, precision=4, trim='k'), + "1.0000") + + assert_equal(fpos(tp('1.'), unique=False, precision=4, trim='.'), + "1.") + assert_equal(fpos(tp('1.2'), unique=False, precision=4, trim='.'), + "1.2" if tp != np.float16 else "1.2002") + + assert_equal(fpos(tp('1.'), unique=False, precision=4, trim='0'), + "1.0") + assert_equal(fpos(tp('1.2'), unique=False, precision=4, trim='0'), + "1.2" if tp != np.float16 else "1.2002") + assert_equal(fpos(tp('1.'), trim='0'), "1.0") + + assert_equal(fpos(tp('1.'), unique=False, precision=4, trim='-'), + "1") + assert_equal(fpos(tp('1.2'), unique=False, precision=4, trim='-'), + "1.2" if tp != np.float16 else "1.2002") + assert_equal(fpos(tp('1.'), trim='-'), "1") + assert_equal(fpos(tp('1.001'), precision=1, trim='-'), "1") + + @pytest.mark.skipif(not platform.machine().startswith("ppc64"), + reason="only applies to ppc float128 values") + def test_ppc64_ibm_double_double128(self): + # check that the precision decreases once we get into the subnormal + # range. Unlike float64, this starts around 1e-292 instead of 1e-308, + # which happens when the first double is normal and the second is + # subnormal. + x = np.float128('2.123123123123123123123123123123123e-286') + got = [str(x/np.float128('2e' + str(i))) for i in range(0,40)] + expected = [ + "1.06156156156156156156156156156157e-286", + "1.06156156156156156156156156156158e-287", + "1.06156156156156156156156156156159e-288", + "1.0615615615615615615615615615616e-289", + "1.06156156156156156156156156156157e-290", + "1.06156156156156156156156156156156e-291", + "1.0615615615615615615615615615616e-292", + "1.0615615615615615615615615615615e-293", + "1.061561561561561561561561561562e-294", + "1.06156156156156156156156156155e-295", + "1.0615615615615615615615615616e-296", + "1.06156156156156156156156156e-297", + "1.06156156156156156156156157e-298", + "1.0615615615615615615615616e-299", + "1.06156156156156156156156e-300", + "1.06156156156156156156155e-301", + "1.0615615615615615615616e-302", + "1.061561561561561561562e-303", + "1.06156156156156156156e-304", + "1.0615615615615615618e-305", + "1.06156156156156156e-306", + "1.06156156156156157e-307", + "1.0615615615615616e-308", + "1.06156156156156e-309", + "1.06156156156157e-310", + "1.0615615615616e-311", + "1.06156156156e-312", + "1.06156156154e-313", + "1.0615615616e-314", + "1.06156156e-315", + "1.06156155e-316", + "1.061562e-317", + "1.06156e-318", + "1.06155e-319", + "1.0617e-320", + "1.06e-321", + "1.04e-322", + "1e-323", + "0.0", + "0.0"] + assert_equal(got, expected) + + # Note: we follow glibc behavior, but it (or gcc) might not be right. + # In particular we can get two values that print the same but are not + # equal: + a = np.float128('2')/np.float128('3') + b = np.float128(str(a)) + assert_equal(str(a), str(b)) + assert_(a != b) + + def float32_roundtrip(self): + # gh-9360 + x = np.float32(1024 - 2**-14) + y = np.float32(1024 - 2**-13) + assert_(repr(x) != repr(y)) + assert_equal(np.float32(repr(x)), x) + assert_equal(np.float32(repr(y)), y) + + def float64_vs_python(self): + # gh-2643, gh-6136, gh-6908 + assert_equal(repr(np.float64(0.1)), repr(0.1)) + assert_(repr(np.float64(0.20000000000000004)) != repr(0.2)) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_shape_base.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_shape_base.py new file mode 100644 index 0000000000000000000000000000000000000000..5b9de37f5f60a103815b8ea7887ddf8ea511cb18 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_shape_base.py @@ -0,0 +1,827 @@ +import pytest +import numpy as np +from numpy._core import ( + array, arange, atleast_1d, atleast_2d, atleast_3d, block, vstack, hstack, + newaxis, concatenate, stack + ) +from numpy.exceptions import AxisError +from numpy._core.shape_base import (_block_dispatcher, _block_setup, + _block_concatenate, _block_slicing) +from numpy.testing import ( + assert_, assert_raises, assert_array_equal, assert_equal, + assert_raises_regex, assert_warns, IS_PYPY + ) + + +class TestAtleast1d: + def test_0D_array(self): + a = array(1) + b = array(2) + res = [atleast_1d(a), atleast_1d(b)] + desired = [array([1]), array([2])] + assert_array_equal(res, desired) + + def test_1D_array(self): + a = array([1, 2]) + b = array([2, 3]) + res = [atleast_1d(a), atleast_1d(b)] + desired = [array([1, 2]), array([2, 3])] + assert_array_equal(res, desired) + + def test_2D_array(self): + a = array([[1, 2], [1, 2]]) + b = array([[2, 3], [2, 3]]) + res = [atleast_1d(a), atleast_1d(b)] + desired = [a, b] + assert_array_equal(res, desired) + + def test_3D_array(self): + a = array([[1, 2], [1, 2]]) + b = array([[2, 3], [2, 3]]) + a = array([a, a]) + b = array([b, b]) + res = [atleast_1d(a), atleast_1d(b)] + desired = [a, b] + assert_array_equal(res, desired) + + def test_r1array(self): + """ Test to make sure equivalent Travis O's r1array function + """ + assert_(atleast_1d(3).shape == (1,)) + assert_(atleast_1d(3j).shape == (1,)) + assert_(atleast_1d(3.0).shape == (1,)) + assert_(atleast_1d([[2, 3], [4, 5]]).shape == (2, 2)) + + +class TestAtleast2d: + def test_0D_array(self): + a = array(1) + b = array(2) + res = [atleast_2d(a), atleast_2d(b)] + desired = [array([[1]]), array([[2]])] + assert_array_equal(res, desired) + + def test_1D_array(self): + a = array([1, 2]) + b = array([2, 3]) + res = [atleast_2d(a), atleast_2d(b)] + desired = [array([[1, 2]]), array([[2, 3]])] + assert_array_equal(res, desired) + + def test_2D_array(self): + a = array([[1, 2], [1, 2]]) + b = array([[2, 3], [2, 3]]) + res = [atleast_2d(a), atleast_2d(b)] + desired = [a, b] + assert_array_equal(res, desired) + + def test_3D_array(self): + a = array([[1, 2], [1, 2]]) + b = array([[2, 3], [2, 3]]) + a = array([a, a]) + b = array([b, b]) + res = [atleast_2d(a), atleast_2d(b)] + desired = [a, b] + assert_array_equal(res, desired) + + def test_r2array(self): + """ Test to make sure equivalent Travis O's r2array function + """ + assert_(atleast_2d(3).shape == (1, 1)) + assert_(atleast_2d([3j, 1]).shape == (1, 2)) + assert_(atleast_2d([[[3, 1], [4, 5]], [[3, 5], [1, 2]]]).shape == (2, 2, 2)) + + +class TestAtleast3d: + def test_0D_array(self): + a = array(1) + b = array(2) + res = [atleast_3d(a), atleast_3d(b)] + desired = [array([[[1]]]), array([[[2]]])] + assert_array_equal(res, desired) + + def test_1D_array(self): + a = array([1, 2]) + b = array([2, 3]) + res = [atleast_3d(a), atleast_3d(b)] + desired = [array([[[1], [2]]]), array([[[2], [3]]])] + assert_array_equal(res, desired) + + def test_2D_array(self): + a = array([[1, 2], [1, 2]]) + b = array([[2, 3], [2, 3]]) + res = [atleast_3d(a), atleast_3d(b)] + desired = [a[:,:, newaxis], b[:,:, newaxis]] + assert_array_equal(res, desired) + + def test_3D_array(self): + a = array([[1, 2], [1, 2]]) + b = array([[2, 3], [2, 3]]) + a = array([a, a]) + b = array([b, b]) + res = [atleast_3d(a), atleast_3d(b)] + desired = [a, b] + assert_array_equal(res, desired) + + +class TestHstack: + def test_non_iterable(self): + assert_raises(TypeError, hstack, 1) + + def test_empty_input(self): + assert_raises(ValueError, hstack, ()) + + def test_0D_array(self): + a = array(1) + b = array(2) + res = hstack([a, b]) + desired = array([1, 2]) + assert_array_equal(res, desired) + + def test_1D_array(self): + a = array([1]) + b = array([2]) + res = hstack([a, b]) + desired = array([1, 2]) + assert_array_equal(res, desired) + + def test_2D_array(self): + a = array([[1], [2]]) + b = array([[1], [2]]) + res = hstack([a, b]) + desired = array([[1, 1], [2, 2]]) + assert_array_equal(res, desired) + + def test_generator(self): + with pytest.raises(TypeError, match="arrays to stack must be"): + hstack((np.arange(3) for _ in range(2))) + with pytest.raises(TypeError, match="arrays to stack must be"): + hstack(map(lambda x: x, np.ones((3, 2)))) + + def test_casting_and_dtype(self): + a = np.array([1, 2, 3]) + b = np.array([2.5, 3.5, 4.5]) + res = np.hstack((a, b), casting="unsafe", dtype=np.int64) + expected_res = np.array([1, 2, 3, 2, 3, 4]) + assert_array_equal(res, expected_res) + + def test_casting_and_dtype_type_error(self): + a = np.array([1, 2, 3]) + b = np.array([2.5, 3.5, 4.5]) + with pytest.raises(TypeError): + hstack((a, b), casting="safe", dtype=np.int64) + + +class TestVstack: + def test_non_iterable(self): + assert_raises(TypeError, vstack, 1) + + def test_empty_input(self): + assert_raises(ValueError, vstack, ()) + + def test_0D_array(self): + a = array(1) + b = array(2) + res = vstack([a, b]) + desired = array([[1], [2]]) + assert_array_equal(res, desired) + + def test_1D_array(self): + a = array([1]) + b = array([2]) + res = vstack([a, b]) + desired = array([[1], [2]]) + assert_array_equal(res, desired) + + def test_2D_array(self): + a = array([[1], [2]]) + b = array([[1], [2]]) + res = vstack([a, b]) + desired = array([[1], [2], [1], [2]]) + assert_array_equal(res, desired) + + def test_2D_array2(self): + a = array([1, 2]) + b = array([1, 2]) + res = vstack([a, b]) + desired = array([[1, 2], [1, 2]]) + assert_array_equal(res, desired) + + def test_generator(self): + with pytest.raises(TypeError, match="arrays to stack must be"): + vstack((np.arange(3) for _ in range(2))) + + def test_casting_and_dtype(self): + a = np.array([1, 2, 3]) + b = np.array([2.5, 3.5, 4.5]) + res = np.vstack((a, b), casting="unsafe", dtype=np.int64) + expected_res = np.array([[1, 2, 3], [2, 3, 4]]) + assert_array_equal(res, expected_res) + + def test_casting_and_dtype_type_error(self): + a = np.array([1, 2, 3]) + b = np.array([2.5, 3.5, 4.5]) + with pytest.raises(TypeError): + vstack((a, b), casting="safe", dtype=np.int64) + + + +class TestConcatenate: + def test_returns_copy(self): + a = np.eye(3) + b = np.concatenate([a]) + b[0, 0] = 2 + assert b[0, 0] != a[0, 0] + + def test_exceptions(self): + # test axis must be in bounds + for ndim in [1, 2, 3]: + a = np.ones((1,)*ndim) + np.concatenate((a, a), axis=0) # OK + assert_raises(AxisError, np.concatenate, (a, a), axis=ndim) + assert_raises(AxisError, np.concatenate, (a, a), axis=-(ndim + 1)) + + # Scalars cannot be concatenated + assert_raises(ValueError, concatenate, (0,)) + assert_raises(ValueError, concatenate, (np.array(0),)) + + # dimensionality must match + assert_raises_regex( + ValueError, + r"all the input arrays must have same number of dimensions, but " + r"the array at index 0 has 1 dimension\(s\) and the array at " + r"index 1 has 2 dimension\(s\)", + np.concatenate, (np.zeros(1), np.zeros((1, 1)))) + + # test shapes must match except for concatenation axis + a = np.ones((1, 2, 3)) + b = np.ones((2, 2, 3)) + axis = list(range(3)) + for i in range(3): + np.concatenate((a, b), axis=axis[0]) # OK + assert_raises_regex( + ValueError, + "all the input array dimensions except for the concatenation axis " + "must match exactly, but along dimension {}, the array at " + "index 0 has size 1 and the array at index 1 has size 2" + .format(i), + np.concatenate, (a, b), axis=axis[1]) + assert_raises(ValueError, np.concatenate, (a, b), axis=axis[2]) + a = np.moveaxis(a, -1, 0) + b = np.moveaxis(b, -1, 0) + axis.append(axis.pop(0)) + + # No arrays to concatenate raises ValueError + assert_raises(ValueError, concatenate, ()) + + def test_concatenate_axis_None(self): + a = np.arange(4, dtype=np.float64).reshape((2, 2)) + b = list(range(3)) + c = ['x'] + r = np.concatenate((a, a), axis=None) + assert_equal(r.dtype, a.dtype) + assert_equal(r.ndim, 1) + r = np.concatenate((a, b), axis=None) + assert_equal(r.size, a.size + len(b)) + assert_equal(r.dtype, a.dtype) + r = np.concatenate((a, b, c), axis=None, dtype="U") + d = array(['0.0', '1.0', '2.0', '3.0', + '0', '1', '2', 'x']) + assert_array_equal(r, d) + + out = np.zeros(a.size + len(b)) + r = np.concatenate((a, b), axis=None) + rout = np.concatenate((a, b), axis=None, out=out) + assert_(out is rout) + assert_equal(r, rout) + + def test_large_concatenate_axis_None(self): + # When no axis is given, concatenate uses flattened versions. + # This also had a bug with many arrays (see gh-5979). + x = np.arange(1, 100) + r = np.concatenate(x, None) + assert_array_equal(x, r) + + # Once upon a time, this was the same as `axis=None` now it fails + # (with an unspecified error, as multiple things are wrong here) + with pytest.raises(ValueError): + np.concatenate(x, 100) + + def test_concatenate(self): + # Test concatenate function + # One sequence returns unmodified (but as array) + r4 = list(range(4)) + assert_array_equal(concatenate((r4,)), r4) + # Any sequence + assert_array_equal(concatenate((tuple(r4),)), r4) + assert_array_equal(concatenate((array(r4),)), r4) + # 1D default concatenation + r3 = list(range(3)) + assert_array_equal(concatenate((r4, r3)), r4 + r3) + # Mixed sequence types + assert_array_equal(concatenate((tuple(r4), r3)), r4 + r3) + assert_array_equal(concatenate((array(r4), r3)), r4 + r3) + # Explicit axis specification + assert_array_equal(concatenate((r4, r3), 0), r4 + r3) + # Including negative + assert_array_equal(concatenate((r4, r3), -1), r4 + r3) + # 2D + a23 = array([[10, 11, 12], [13, 14, 15]]) + a13 = array([[0, 1, 2]]) + res = array([[10, 11, 12], [13, 14, 15], [0, 1, 2]]) + assert_array_equal(concatenate((a23, a13)), res) + assert_array_equal(concatenate((a23, a13), 0), res) + assert_array_equal(concatenate((a23.T, a13.T), 1), res.T) + assert_array_equal(concatenate((a23.T, a13.T), -1), res.T) + # Arrays much match shape + assert_raises(ValueError, concatenate, (a23.T, a13.T), 0) + # 3D + res = arange(2 * 3 * 7).reshape((2, 3, 7)) + a0 = res[..., :4] + a1 = res[..., 4:6] + a2 = res[..., 6:] + assert_array_equal(concatenate((a0, a1, a2), 2), res) + assert_array_equal(concatenate((a0, a1, a2), -1), res) + assert_array_equal(concatenate((a0.T, a1.T, a2.T), 0), res.T) + + out = res.copy() + rout = concatenate((a0, a1, a2), 2, out=out) + assert_(out is rout) + assert_equal(res, rout) + + @pytest.mark.skipif(IS_PYPY, reason="PYPY handles sq_concat, nb_add differently than cpython") + def test_operator_concat(self): + import operator + a = array([1, 2]) + b = array([3, 4]) + n = [1,2] + res = array([1, 2, 3, 4]) + assert_raises(TypeError, operator.concat, a, b) + assert_raises(TypeError, operator.concat, a, n) + assert_raises(TypeError, operator.concat, n, a) + assert_raises(TypeError, operator.concat, a, 1) + assert_raises(TypeError, operator.concat, 1, a) + + def test_bad_out_shape(self): + a = array([1, 2]) + b = array([3, 4]) + + assert_raises(ValueError, concatenate, (a, b), out=np.empty(5)) + assert_raises(ValueError, concatenate, (a, b), out=np.empty((4,1))) + assert_raises(ValueError, concatenate, (a, b), out=np.empty((1,4))) + concatenate((a, b), out=np.empty(4)) + + @pytest.mark.parametrize("axis", [None, 0]) + @pytest.mark.parametrize("out_dtype", ["c8", "f4", "f8", ">f8", "i8", "S4"]) + @pytest.mark.parametrize("casting", + ['no', 'equiv', 'safe', 'same_kind', 'unsafe']) + def test_out_and_dtype(self, axis, out_dtype, casting): + # Compare usage of `out=out` with `dtype=out.dtype` + out = np.empty(4, dtype=out_dtype) + to_concat = (array([1.1, 2.2]), array([3.3, 4.4])) + + if not np.can_cast(to_concat[0], out_dtype, casting=casting): + with assert_raises(TypeError): + concatenate(to_concat, out=out, axis=axis, casting=casting) + with assert_raises(TypeError): + concatenate(to_concat, dtype=out.dtype, + axis=axis, casting=casting) + else: + res_out = concatenate(to_concat, out=out, + axis=axis, casting=casting) + res_dtype = concatenate(to_concat, dtype=out.dtype, + axis=axis, casting=casting) + assert res_out is out + assert_array_equal(out, res_dtype) + assert res_dtype.dtype == out_dtype + + with assert_raises(TypeError): + concatenate(to_concat, out=out, dtype=out_dtype, axis=axis) + + @pytest.mark.parametrize("axis", [None, 0]) + @pytest.mark.parametrize("string_dt", ["S", "U", "S0", "U0"]) + @pytest.mark.parametrize("arrs", + [([0.],), ([0.], [1]), ([0], ["string"], [1.])]) + def test_dtype_with_promotion(self, arrs, string_dt, axis): + # Note that U0 and S0 should be deprecated eventually and changed to + # actually give the empty string result (together with `np.array`) + res = np.concatenate(arrs, axis=axis, dtype=string_dt, casting="unsafe") + # The actual dtype should be identical to a cast (of a double array): + assert res.dtype == np.array(1.).astype(string_dt).dtype + + @pytest.mark.parametrize("axis", [None, 0]) + def test_string_dtype_does_not_inspect(self, axis): + with pytest.raises(TypeError): + np.concatenate(([None], [1]), dtype="S", axis=axis) + with pytest.raises(TypeError): + np.concatenate(([None], [1]), dtype="U", axis=axis) + + @pytest.mark.parametrize("axis", [None, 0]) + def test_subarray_error(self, axis): + with pytest.raises(TypeError, match=".*subarray dtype"): + np.concatenate(([1], [1]), dtype="(2,)i", axis=axis) + + +def test_stack(): + # non-iterable input + assert_raises(TypeError, stack, 1) + + # 0d input + for input_ in [(1, 2, 3), + [np.int32(1), np.int32(2), np.int32(3)], + [np.array(1), np.array(2), np.array(3)]]: + assert_array_equal(stack(input_), [1, 2, 3]) + # 1d input examples + a = np.array([1, 2, 3]) + b = np.array([4, 5, 6]) + r1 = array([[1, 2, 3], [4, 5, 6]]) + assert_array_equal(np.stack((a, b)), r1) + assert_array_equal(np.stack((a, b), axis=1), r1.T) + # all input types + assert_array_equal(np.stack(list([a, b])), r1) + assert_array_equal(np.stack(array([a, b])), r1) + # all shapes for 1d input + arrays = [np.random.randn(3) for _ in range(10)] + axes = [0, 1, -1, -2] + expected_shapes = [(10, 3), (3, 10), (3, 10), (10, 3)] + for axis, expected_shape in zip(axes, expected_shapes): + assert_equal(np.stack(arrays, axis).shape, expected_shape) + assert_raises_regex(AxisError, 'out of bounds', stack, arrays, axis=2) + assert_raises_regex(AxisError, 'out of bounds', stack, arrays, axis=-3) + # all shapes for 2d input + arrays = [np.random.randn(3, 4) for _ in range(10)] + axes = [0, 1, 2, -1, -2, -3] + expected_shapes = [(10, 3, 4), (3, 10, 4), (3, 4, 10), + (3, 4, 10), (3, 10, 4), (10, 3, 4)] + for axis, expected_shape in zip(axes, expected_shapes): + assert_equal(np.stack(arrays, axis).shape, expected_shape) + # empty arrays + assert_(stack([[], [], []]).shape == (3, 0)) + assert_(stack([[], [], []], axis=1).shape == (0, 3)) + # out + out = np.zeros_like(r1) + np.stack((a, b), out=out) + assert_array_equal(out, r1) + # edge cases + assert_raises_regex(ValueError, 'need at least one array', stack, []) + assert_raises_regex(ValueError, 'must have the same shape', + stack, [1, np.arange(3)]) + assert_raises_regex(ValueError, 'must have the same shape', + stack, [np.arange(3), 1]) + assert_raises_regex(ValueError, 'must have the same shape', + stack, [np.arange(3), 1], axis=1) + assert_raises_regex(ValueError, 'must have the same shape', + stack, [np.zeros((3, 3)), np.zeros(3)], axis=1) + assert_raises_regex(ValueError, 'must have the same shape', + stack, [np.arange(2), np.arange(3)]) + + # do not accept generators + with pytest.raises(TypeError, match="arrays to stack must be"): + stack((x for x in range(3))) + + #casting and dtype test + a = np.array([1, 2, 3]) + b = np.array([2.5, 3.5, 4.5]) + res = np.stack((a, b), axis=1, casting="unsafe", dtype=np.int64) + expected_res = np.array([[1, 2], [2, 3], [3, 4]]) + assert_array_equal(res, expected_res) + #casting and dtype with TypeError + with assert_raises(TypeError): + stack((a, b), dtype=np.int64, axis=1, casting="safe") + + +@pytest.mark.parametrize("axis", [0]) +@pytest.mark.parametrize("out_dtype", ["c8", "f4", "f8", ">f8", "i8"]) +@pytest.mark.parametrize("casting", + ['no', 'equiv', 'safe', 'same_kind', 'unsafe']) +def test_stack_out_and_dtype(axis, out_dtype, casting): + to_concat = (array([1, 2]), array([3, 4])) + res = array([[1, 2], [3, 4]]) + out = np.zeros_like(res) + + if not np.can_cast(to_concat[0], out_dtype, casting=casting): + with assert_raises(TypeError): + stack(to_concat, dtype=out_dtype, + axis=axis, casting=casting) + else: + res_out = stack(to_concat, out=out, + axis=axis, casting=casting) + res_dtype = stack(to_concat, dtype=out_dtype, + axis=axis, casting=casting) + assert res_out is out + assert_array_equal(out, res_dtype) + assert res_dtype.dtype == out_dtype + + with assert_raises(TypeError): + stack(to_concat, out=out, dtype=out_dtype, axis=axis) + + +class TestBlock: + @pytest.fixture(params=['block', 'force_concatenate', 'force_slicing']) + def block(self, request): + # blocking small arrays and large arrays go through different paths. + # the algorithm is triggered depending on the number of element + # copies required. + # We define a test fixture that forces most tests to go through + # both code paths. + # Ultimately, this should be removed if a single algorithm is found + # to be faster for both small and large arrays. + def _block_force_concatenate(arrays): + arrays, list_ndim, result_ndim, _ = _block_setup(arrays) + return _block_concatenate(arrays, list_ndim, result_ndim) + + def _block_force_slicing(arrays): + arrays, list_ndim, result_ndim, _ = _block_setup(arrays) + return _block_slicing(arrays, list_ndim, result_ndim) + + if request.param == 'force_concatenate': + return _block_force_concatenate + elif request.param == 'force_slicing': + return _block_force_slicing + elif request.param == 'block': + return block + else: + raise ValueError('Unknown blocking request. There is a typo in the tests.') + + def test_returns_copy(self, block): + a = np.eye(3) + b = block(a) + b[0, 0] = 2 + assert b[0, 0] != a[0, 0] + + def test_block_total_size_estimate(self, block): + _, _, _, total_size = _block_setup([1]) + assert total_size == 1 + + _, _, _, total_size = _block_setup([[1]]) + assert total_size == 1 + + _, _, _, total_size = _block_setup([[1, 1]]) + assert total_size == 2 + + _, _, _, total_size = _block_setup([[1], [1]]) + assert total_size == 2 + + _, _, _, total_size = _block_setup([[1, 2], [3, 4]]) + assert total_size == 4 + + def test_block_simple_row_wise(self, block): + a_2d = np.ones((2, 2)) + b_2d = 2 * a_2d + desired = np.array([[1, 1, 2, 2], + [1, 1, 2, 2]]) + result = block([a_2d, b_2d]) + assert_equal(desired, result) + + def test_block_simple_column_wise(self, block): + a_2d = np.ones((2, 2)) + b_2d = 2 * a_2d + expected = np.array([[1, 1], + [1, 1], + [2, 2], + [2, 2]]) + result = block([[a_2d], [b_2d]]) + assert_equal(expected, result) + + def test_block_with_1d_arrays_row_wise(self, block): + # # # 1-D vectors are treated as row arrays + a = np.array([1, 2, 3]) + b = np.array([2, 3, 4]) + expected = np.array([1, 2, 3, 2, 3, 4]) + result = block([a, b]) + assert_equal(expected, result) + + def test_block_with_1d_arrays_multiple_rows(self, block): + a = np.array([1, 2, 3]) + b = np.array([2, 3, 4]) + expected = np.array([[1, 2, 3, 2, 3, 4], + [1, 2, 3, 2, 3, 4]]) + result = block([[a, b], [a, b]]) + assert_equal(expected, result) + + def test_block_with_1d_arrays_column_wise(self, block): + # # # 1-D vectors are treated as row arrays + a_1d = np.array([1, 2, 3]) + b_1d = np.array([2, 3, 4]) + expected = np.array([[1, 2, 3], + [2, 3, 4]]) + result = block([[a_1d], [b_1d]]) + assert_equal(expected, result) + + def test_block_mixed_1d_and_2d(self, block): + a_2d = np.ones((2, 2)) + b_1d = np.array([2, 2]) + result = block([[a_2d], [b_1d]]) + expected = np.array([[1, 1], + [1, 1], + [2, 2]]) + assert_equal(expected, result) + + def test_block_complicated(self, block): + # a bit more complicated + one_2d = np.array([[1, 1, 1]]) + two_2d = np.array([[2, 2, 2]]) + three_2d = np.array([[3, 3, 3, 3, 3, 3]]) + four_1d = np.array([4, 4, 4, 4, 4, 4]) + five_0d = np.array(5) + six_1d = np.array([6, 6, 6, 6, 6]) + zero_2d = np.zeros((2, 6)) + + expected = np.array([[1, 1, 1, 2, 2, 2], + [3, 3, 3, 3, 3, 3], + [4, 4, 4, 4, 4, 4], + [5, 6, 6, 6, 6, 6], + [0, 0, 0, 0, 0, 0], + [0, 0, 0, 0, 0, 0]]) + + result = block([[one_2d, two_2d], + [three_2d], + [four_1d], + [five_0d, six_1d], + [zero_2d]]) + assert_equal(result, expected) + + def test_nested(self, block): + one = np.array([1, 1, 1]) + two = np.array([[2, 2, 2], [2, 2, 2], [2, 2, 2]]) + three = np.array([3, 3, 3]) + four = np.array([4, 4, 4]) + five = np.array(5) + six = np.array([6, 6, 6, 6, 6]) + zero = np.zeros((2, 6)) + + result = block([ + [ + block([ + [one], + [three], + [four] + ]), + two + ], + [five, six], + [zero] + ]) + expected = np.array([[1, 1, 1, 2, 2, 2], + [3, 3, 3, 2, 2, 2], + [4, 4, 4, 2, 2, 2], + [5, 6, 6, 6, 6, 6], + [0, 0, 0, 0, 0, 0], + [0, 0, 0, 0, 0, 0]]) + + assert_equal(result, expected) + + def test_3d(self, block): + a000 = np.ones((2, 2, 2), int) * 1 + + a100 = np.ones((3, 2, 2), int) * 2 + a010 = np.ones((2, 3, 2), int) * 3 + a001 = np.ones((2, 2, 3), int) * 4 + + a011 = np.ones((2, 3, 3), int) * 5 + a101 = np.ones((3, 2, 3), int) * 6 + a110 = np.ones((3, 3, 2), int) * 7 + + a111 = np.ones((3, 3, 3), int) * 8 + + result = block([ + [ + [a000, a001], + [a010, a011], + ], + [ + [a100, a101], + [a110, a111], + ] + ]) + expected = array([[[1, 1, 4, 4, 4], + [1, 1, 4, 4, 4], + [3, 3, 5, 5, 5], + [3, 3, 5, 5, 5], + [3, 3, 5, 5, 5]], + + [[1, 1, 4, 4, 4], + [1, 1, 4, 4, 4], + [3, 3, 5, 5, 5], + [3, 3, 5, 5, 5], + [3, 3, 5, 5, 5]], + + [[2, 2, 6, 6, 6], + [2, 2, 6, 6, 6], + [7, 7, 8, 8, 8], + [7, 7, 8, 8, 8], + [7, 7, 8, 8, 8]], + + [[2, 2, 6, 6, 6], + [2, 2, 6, 6, 6], + [7, 7, 8, 8, 8], + [7, 7, 8, 8, 8], + [7, 7, 8, 8, 8]], + + [[2, 2, 6, 6, 6], + [2, 2, 6, 6, 6], + [7, 7, 8, 8, 8], + [7, 7, 8, 8, 8], + [7, 7, 8, 8, 8]]]) + + assert_array_equal(result, expected) + + def test_block_with_mismatched_shape(self, block): + a = np.array([0, 0]) + b = np.eye(2) + assert_raises(ValueError, block, [a, b]) + assert_raises(ValueError, block, [b, a]) + + to_block = [[np.ones((2,3)), np.ones((2,2))], + [np.ones((2,2)), np.ones((2,2))]] + assert_raises(ValueError, block, to_block) + def test_no_lists(self, block): + assert_equal(block(1), np.array(1)) + assert_equal(block(np.eye(3)), np.eye(3)) + + def test_invalid_nesting(self, block): + msg = 'depths are mismatched' + assert_raises_regex(ValueError, msg, block, [1, [2]]) + assert_raises_regex(ValueError, msg, block, [1, []]) + assert_raises_regex(ValueError, msg, block, [[1], 2]) + assert_raises_regex(ValueError, msg, block, [[], 2]) + assert_raises_regex(ValueError, msg, block, [ + [[1], [2]], + [[3, 4]], + [5] # missing brackets + ]) + + def test_empty_lists(self, block): + assert_raises_regex(ValueError, 'empty', block, []) + assert_raises_regex(ValueError, 'empty', block, [[]]) + assert_raises_regex(ValueError, 'empty', block, [[1], []]) + + def test_tuple(self, block): + assert_raises_regex(TypeError, 'tuple', block, ([1, 2], [3, 4])) + assert_raises_regex(TypeError, 'tuple', block, [(1, 2), (3, 4)]) + + def test_different_ndims(self, block): + a = 1. + b = 2 * np.ones((1, 2)) + c = 3 * np.ones((1, 1, 3)) + + result = block([a, b, c]) + expected = np.array([[[1., 2., 2., 3., 3., 3.]]]) + + assert_equal(result, expected) + + def test_different_ndims_depths(self, block): + a = 1. + b = 2 * np.ones((1, 2)) + c = 3 * np.ones((1, 2, 3)) + + result = block([[a, b], [c]]) + expected = np.array([[[1., 2., 2.], + [3., 3., 3.], + [3., 3., 3.]]]) + + assert_equal(result, expected) + + def test_block_memory_order(self, block): + # 3D + arr_c = np.zeros((3,)*3, order='C') + arr_f = np.zeros((3,)*3, order='F') + + b_c = [[[arr_c, arr_c], + [arr_c, arr_c]], + [[arr_c, arr_c], + [arr_c, arr_c]]] + + b_f = [[[arr_f, arr_f], + [arr_f, arr_f]], + [[arr_f, arr_f], + [arr_f, arr_f]]] + + assert block(b_c).flags['C_CONTIGUOUS'] + assert block(b_f).flags['F_CONTIGUOUS'] + + arr_c = np.zeros((3, 3), order='C') + arr_f = np.zeros((3, 3), order='F') + # 2D + b_c = [[arr_c, arr_c], + [arr_c, arr_c]] + + b_f = [[arr_f, arr_f], + [arr_f, arr_f]] + + assert block(b_c).flags['C_CONTIGUOUS'] + assert block(b_f).flags['F_CONTIGUOUS'] + + +def test_block_dispatcher(): + class ArrayLike: + pass + a = ArrayLike() + b = ArrayLike() + c = ArrayLike() + assert_equal(list(_block_dispatcher(a)), [a]) + assert_equal(list(_block_dispatcher([a])), [a]) + assert_equal(list(_block_dispatcher([a, b])), [a, b]) + assert_equal(list(_block_dispatcher([[a], [b, [c]]])), [a, b, c]) + # don't recurse into non-lists + assert_equal(list(_block_dispatcher((a, b))), [(a, b)]) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_simd.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_simd.py new file mode 100644 index 0000000000000000000000000000000000000000..9d472555edc43266ccbb825d10172cc663b9435e --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_simd.py @@ -0,0 +1,1333 @@ +# NOTE: Please avoid the use of numpy.testing since NPYV intrinsics +# may be involved in their functionality. +import pytest, math, re +import itertools +import operator +from numpy._core._simd import targets, clear_floatstatus, get_floatstatus +from numpy._core._multiarray_umath import __cpu_baseline__ + +def check_floatstatus(divbyzero=False, overflow=False, + underflow=False, invalid=False, + all=False): + #define NPY_FPE_DIVIDEBYZERO 1 + #define NPY_FPE_OVERFLOW 2 + #define NPY_FPE_UNDERFLOW 4 + #define NPY_FPE_INVALID 8 + err = get_floatstatus() + ret = (all or divbyzero) and (err & 1) != 0 + ret |= (all or overflow) and (err & 2) != 0 + ret |= (all or underflow) and (err & 4) != 0 + ret |= (all or invalid) and (err & 8) != 0 + return ret + +class _Test_Utility: + # submodule of the desired SIMD extension, e.g. targets["AVX512F"] + npyv = None + # the current data type suffix e.g. 's8' + sfx = None + # target name can be 'baseline' or one or more of CPU features + target_name = None + + def __getattr__(self, attr): + """ + To call NPV intrinsics without the attribute 'npyv' and + auto suffixing intrinsics according to class attribute 'sfx' + """ + return getattr(self.npyv, attr + "_" + self.sfx) + + def _x2(self, intrin_name): + return getattr(self.npyv, f"{intrin_name}_{self.sfx}x2") + + def _data(self, start=None, count=None, reverse=False): + """ + Create list of consecutive numbers according to number of vector's lanes. + """ + if start is None: + start = 1 + if count is None: + count = self.nlanes + rng = range(start, start + count) + if reverse: + rng = reversed(rng) + if self._is_fp(): + return [x / 1.0 for x in rng] + return list(rng) + + def _is_unsigned(self): + return self.sfx[0] == 'u' + + def _is_signed(self): + return self.sfx[0] == 's' + + def _is_fp(self): + return self.sfx[0] == 'f' + + def _scalar_size(self): + return int(self.sfx[1:]) + + def _int_clip(self, seq): + if self._is_fp(): + return seq + max_int = self._int_max() + min_int = self._int_min() + return [min(max(v, min_int), max_int) for v in seq] + + def _int_max(self): + if self._is_fp(): + return None + max_u = self._to_unsigned(self.setall(-1))[0] + if self._is_signed(): + return max_u // 2 + return max_u + + def _int_min(self): + if self._is_fp(): + return None + if self._is_unsigned(): + return 0 + return -(self._int_max() + 1) + + def _true_mask(self): + max_unsig = getattr(self.npyv, "setall_u" + self.sfx[1:])(-1) + return max_unsig[0] + + def _to_unsigned(self, vector): + if isinstance(vector, (list, tuple)): + return getattr(self.npyv, "load_u" + self.sfx[1:])(vector) + else: + sfx = vector.__name__.replace("npyv_", "") + if sfx[0] == "b": + cvt_intrin = "cvt_u{0}_b{0}" + else: + cvt_intrin = "reinterpret_u{0}_{1}" + return getattr(self.npyv, cvt_intrin.format(sfx[1:], sfx))(vector) + + def _pinfinity(self): + return float("inf") + + def _ninfinity(self): + return -float("inf") + + def _nan(self): + return float("nan") + + def _cpu_features(self): + target = self.target_name + if target == "baseline": + target = __cpu_baseline__ + else: + target = target.split('__') # multi-target separator + return ' '.join(target) + +class _SIMD_BOOL(_Test_Utility): + """ + To test all boolean vector types at once + """ + def _nlanes(self): + return getattr(self.npyv, "nlanes_u" + self.sfx[1:]) + + def _data(self, start=None, count=None, reverse=False): + true_mask = self._true_mask() + rng = range(self._nlanes()) + if reverse: + rng = reversed(rng) + return [true_mask if x % 2 else 0 for x in rng] + + def _load_b(self, data): + len_str = self.sfx[1:] + load = getattr(self.npyv, "load_u" + len_str) + cvt = getattr(self.npyv, f"cvt_b{len_str}_u{len_str}") + return cvt(load(data)) + + def test_operators_logical(self): + """ + Logical operations for boolean types. + Test intrinsics: + npyv_xor_##SFX, npyv_and_##SFX, npyv_or_##SFX, npyv_not_##SFX, + npyv_andc_b8, npvy_orc_b8, nvpy_xnor_b8 + """ + data_a = self._data() + data_b = self._data(reverse=True) + vdata_a = self._load_b(data_a) + vdata_b = self._load_b(data_b) + + data_and = [a & b for a, b in zip(data_a, data_b)] + vand = getattr(self, "and")(vdata_a, vdata_b) + assert vand == data_and + + data_or = [a | b for a, b in zip(data_a, data_b)] + vor = getattr(self, "or")(vdata_a, vdata_b) + assert vor == data_or + + data_xor = [a ^ b for a, b in zip(data_a, data_b)] + vxor = getattr(self, "xor")(vdata_a, vdata_b) + assert vxor == data_xor + + vnot = getattr(self, "not")(vdata_a) + assert vnot == data_b + + # among the boolean types, andc, orc and xnor only support b8 + if self.sfx not in ("b8"): + return + + data_andc = [(a & ~b) & 0xFF for a, b in zip(data_a, data_b)] + vandc = getattr(self, "andc")(vdata_a, vdata_b) + assert data_andc == vandc + + data_orc = [(a | ~b) & 0xFF for a, b in zip(data_a, data_b)] + vorc = getattr(self, "orc")(vdata_a, vdata_b) + assert data_orc == vorc + + data_xnor = [~(a ^ b) & 0xFF for a, b in zip(data_a, data_b)] + vxnor = getattr(self, "xnor")(vdata_a, vdata_b) + assert data_xnor == vxnor + + def test_tobits(self): + data2bits = lambda data: sum([int(x != 0) << i for i, x in enumerate(data, 0)]) + for data in (self._data(), self._data(reverse=True)): + vdata = self._load_b(data) + data_bits = data2bits(data) + tobits = self.tobits(vdata) + bin_tobits = bin(tobits) + assert bin_tobits == bin(data_bits) + + def test_pack(self): + """ + Pack multiple vectors into one + Test intrinsics: + npyv_pack_b8_b16 + npyv_pack_b8_b32 + npyv_pack_b8_b64 + """ + if self.sfx not in ("b16", "b32", "b64"): + return + # create the vectors + data = self._data() + rdata = self._data(reverse=True) + vdata = self._load_b(data) + vrdata = self._load_b(rdata) + pack_simd = getattr(self.npyv, f"pack_b8_{self.sfx}") + # for scalar execution, concatenate the elements of the multiple lists + # into a single list (spack) and then iterate over the elements of + # the created list applying a mask to capture the first byte of them. + if self.sfx == "b16": + spack = [(i & 0xFF) for i in (list(rdata) + list(data))] + vpack = pack_simd(vrdata, vdata) + elif self.sfx == "b32": + spack = [(i & 0xFF) for i in (2*list(rdata) + 2*list(data))] + vpack = pack_simd(vrdata, vrdata, vdata, vdata) + elif self.sfx == "b64": + spack = [(i & 0xFF) for i in (4*list(rdata) + 4*list(data))] + vpack = pack_simd(vrdata, vrdata, vrdata, vrdata, + vdata, vdata, vdata, vdata) + assert vpack == spack + + @pytest.mark.parametrize("intrin", ["any", "all"]) + @pytest.mark.parametrize("data", ( + [-1, 0], + [0, -1], + [-1], + [0] + )) + def test_operators_crosstest(self, intrin, data): + """ + Test intrinsics: + npyv_any_##SFX + npyv_all_##SFX + """ + data_a = self._load_b(data * self._nlanes()) + func = eval(intrin) + intrin = getattr(self, intrin) + desired = func(data_a) + simd = intrin(data_a) + assert not not simd == desired + +class _SIMD_INT(_Test_Utility): + """ + To test all integer vector types at once + """ + def test_operators_shift(self): + if self.sfx in ("u8", "s8"): + return + + data_a = self._data(self._int_max() - self.nlanes) + data_b = self._data(self._int_min(), reverse=True) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + + for count in range(self._scalar_size()): + # load to cast + data_shl_a = self.load([a << count for a in data_a]) + # left shift + shl = self.shl(vdata_a, count) + assert shl == data_shl_a + # load to cast + data_shr_a = self.load([a >> count for a in data_a]) + # right shift + shr = self.shr(vdata_a, count) + assert shr == data_shr_a + + # shift by zero or max or out-range immediate constant is not applicable and illogical + for count in range(1, self._scalar_size()): + # load to cast + data_shl_a = self.load([a << count for a in data_a]) + # left shift by an immediate constant + shli = self.shli(vdata_a, count) + assert shli == data_shl_a + # load to cast + data_shr_a = self.load([a >> count for a in data_a]) + # right shift by an immediate constant + shri = self.shri(vdata_a, count) + assert shri == data_shr_a + + def test_arithmetic_subadd_saturated(self): + if self.sfx in ("u32", "s32", "u64", "s64"): + return + + data_a = self._data(self._int_max() - self.nlanes) + data_b = self._data(self._int_min(), reverse=True) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + + data_adds = self._int_clip([a + b for a, b in zip(data_a, data_b)]) + adds = self.adds(vdata_a, vdata_b) + assert adds == data_adds + + data_subs = self._int_clip([a - b for a, b in zip(data_a, data_b)]) + subs = self.subs(vdata_a, vdata_b) + assert subs == data_subs + + def test_math_max_min(self): + data_a = self._data() + data_b = self._data(self.nlanes) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + + data_max = [max(a, b) for a, b in zip(data_a, data_b)] + simd_max = self.max(vdata_a, vdata_b) + assert simd_max == data_max + + data_min = [min(a, b) for a, b in zip(data_a, data_b)] + simd_min = self.min(vdata_a, vdata_b) + assert simd_min == data_min + + @pytest.mark.parametrize("start", [-100, -10000, 0, 100, 10000]) + def test_reduce_max_min(self, start): + """ + Test intrinsics: + npyv_reduce_max_##sfx + npyv_reduce_min_##sfx + """ + vdata_a = self.load(self._data(start)) + assert self.reduce_max(vdata_a) == max(vdata_a) + assert self.reduce_min(vdata_a) == min(vdata_a) + + +class _SIMD_FP32(_Test_Utility): + """ + To only test single precision + """ + def test_conversions(self): + """ + Round to nearest even integer, assume CPU control register is set to rounding. + Test intrinsics: + npyv_round_s32_##SFX + """ + features = self._cpu_features() + if not self.npyv.simd_f64 and re.match(r".*(NEON|ASIMD)", features): + # very costly to emulate nearest even on Armv7 + # instead we round halves to up. e.g. 0.5 -> 1, -0.5 -> -1 + _round = lambda v: int(v + (0.5 if v >= 0 else -0.5)) + else: + _round = round + vdata_a = self.load(self._data()) + vdata_a = self.sub(vdata_a, self.setall(0.5)) + data_round = [_round(x) for x in vdata_a] + vround = self.round_s32(vdata_a) + assert vround == data_round + +class _SIMD_FP64(_Test_Utility): + """ + To only test double precision + """ + def test_conversions(self): + """ + Round to nearest even integer, assume CPU control register is set to rounding. + Test intrinsics: + npyv_round_s32_##SFX + """ + vdata_a = self.load(self._data()) + vdata_a = self.sub(vdata_a, self.setall(0.5)) + vdata_b = self.mul(vdata_a, self.setall(-1.5)) + data_round = [round(x) for x in list(vdata_a) + list(vdata_b)] + vround = self.round_s32(vdata_a, vdata_b) + assert vround == data_round + +class _SIMD_FP(_Test_Utility): + """ + To test all float vector types at once + """ + def test_arithmetic_fused(self): + vdata_a, vdata_b, vdata_c = [self.load(self._data())]*3 + vdata_cx2 = self.add(vdata_c, vdata_c) + # multiply and add, a*b + c + data_fma = self.load([a * b + c for a, b, c in zip(vdata_a, vdata_b, vdata_c)]) + fma = self.muladd(vdata_a, vdata_b, vdata_c) + assert fma == data_fma + # multiply and subtract, a*b - c + fms = self.mulsub(vdata_a, vdata_b, vdata_c) + data_fms = self.sub(data_fma, vdata_cx2) + assert fms == data_fms + # negate multiply and add, -(a*b) + c + nfma = self.nmuladd(vdata_a, vdata_b, vdata_c) + data_nfma = self.sub(vdata_cx2, data_fma) + assert nfma == data_nfma + # negate multiply and subtract, -(a*b) - c + nfms = self.nmulsub(vdata_a, vdata_b, vdata_c) + data_nfms = self.mul(data_fma, self.setall(-1)) + assert nfms == data_nfms + # multiply, add for odd elements and subtract even elements. + # (a * b) -+ c + fmas = list(self.muladdsub(vdata_a, vdata_b, vdata_c)) + assert fmas[0::2] == list(data_fms)[0::2] + assert fmas[1::2] == list(data_fma)[1::2] + + def test_abs(self): + pinf, ninf, nan = self._pinfinity(), self._ninfinity(), self._nan() + data = self._data() + vdata = self.load(self._data()) + + abs_cases = ((-0, 0), (ninf, pinf), (pinf, pinf), (nan, nan)) + for case, desired in abs_cases: + data_abs = [desired]*self.nlanes + vabs = self.abs(self.setall(case)) + assert vabs == pytest.approx(data_abs, nan_ok=True) + + vabs = self.abs(self.mul(vdata, self.setall(-1))) + assert vabs == data + + def test_sqrt(self): + pinf, ninf, nan = self._pinfinity(), self._ninfinity(), self._nan() + data = self._data() + vdata = self.load(self._data()) + + sqrt_cases = ((-0.0, -0.0), (0.0, 0.0), (-1.0, nan), (ninf, nan), (pinf, pinf)) + for case, desired in sqrt_cases: + data_sqrt = [desired]*self.nlanes + sqrt = self.sqrt(self.setall(case)) + assert sqrt == pytest.approx(data_sqrt, nan_ok=True) + + data_sqrt = self.load([math.sqrt(x) for x in data]) # load to truncate precision + sqrt = self.sqrt(vdata) + assert sqrt == data_sqrt + + def test_square(self): + pinf, ninf, nan = self._pinfinity(), self._ninfinity(), self._nan() + data = self._data() + vdata = self.load(self._data()) + # square + square_cases = ((nan, nan), (pinf, pinf), (ninf, pinf)) + for case, desired in square_cases: + data_square = [desired]*self.nlanes + square = self.square(self.setall(case)) + assert square == pytest.approx(data_square, nan_ok=True) + + data_square = [x*x for x in data] + square = self.square(vdata) + assert square == data_square + + @pytest.mark.parametrize("intrin, func", [("ceil", math.ceil), + ("trunc", math.trunc), ("floor", math.floor), ("rint", round)]) + def test_rounding(self, intrin, func): + """ + Test intrinsics: + npyv_rint_##SFX + npyv_ceil_##SFX + npyv_trunc_##SFX + npyv_floor##SFX + """ + intrin_name = intrin + intrin = getattr(self, intrin) + pinf, ninf, nan = self._pinfinity(), self._ninfinity(), self._nan() + # special cases + round_cases = ((nan, nan), (pinf, pinf), (ninf, ninf)) + for case, desired in round_cases: + data_round = [desired]*self.nlanes + _round = intrin(self.setall(case)) + assert _round == pytest.approx(data_round, nan_ok=True) + + for x in range(0, 2**20, 256**2): + for w in (-1.05, -1.10, -1.15, 1.05, 1.10, 1.15): + data = self.load([(x+a)*w for a in range(self.nlanes)]) + data_round = [func(x) for x in data] + _round = intrin(data) + assert _round == data_round + + # test large numbers + for i in ( + 1.1529215045988576e+18, 4.6116860183954304e+18, + 5.902958103546122e+20, 2.3611832414184488e+21 + ): + x = self.setall(i) + y = intrin(x) + data_round = [func(n) for n in x] + assert y == data_round + + # signed zero + if intrin_name == "floor": + data_szero = (-0.0,) + else: + data_szero = (-0.0, -0.25, -0.30, -0.45, -0.5) + + for w in data_szero: + _round = self._to_unsigned(intrin(self.setall(w))) + data_round = self._to_unsigned(self.setall(-0.0)) + assert _round == data_round + + @pytest.mark.parametrize("intrin", [ + "max", "maxp", "maxn", "min", "minp", "minn" + ]) + def test_max_min(self, intrin): + """ + Test intrinsics: + npyv_max_##sfx + npyv_maxp_##sfx + npyv_maxn_##sfx + npyv_min_##sfx + npyv_minp_##sfx + npyv_minn_##sfx + npyv_reduce_max_##sfx + npyv_reduce_maxp_##sfx + npyv_reduce_maxn_##sfx + npyv_reduce_min_##sfx + npyv_reduce_minp_##sfx + npyv_reduce_minn_##sfx + """ + pinf, ninf, nan = self._pinfinity(), self._ninfinity(), self._nan() + chk_nan = {"xp": 1, "np": 1, "nn": 2, "xn": 2}.get(intrin[-2:], 0) + func = eval(intrin[:3]) + reduce_intrin = getattr(self, "reduce_" + intrin) + intrin = getattr(self, intrin) + hf_nlanes = self.nlanes//2 + + cases = ( + ([0.0, -0.0], [-0.0, 0.0]), + ([10, -10], [10, -10]), + ([pinf, 10], [10, ninf]), + ([10, pinf], [ninf, 10]), + ([10, -10], [10, -10]), + ([-10, 10], [-10, 10]) + ) + for op1, op2 in cases: + vdata_a = self.load(op1*hf_nlanes) + vdata_b = self.load(op2*hf_nlanes) + data = func(vdata_a, vdata_b) + simd = intrin(vdata_a, vdata_b) + assert simd == data + data = func(vdata_a) + simd = reduce_intrin(vdata_a) + assert simd == data + + if not chk_nan: + return + if chk_nan == 1: + test_nan = lambda a, b: ( + b if math.isnan(a) else a if math.isnan(b) else b + ) + else: + test_nan = lambda a, b: ( + nan if math.isnan(a) or math.isnan(b) else b + ) + cases = ( + (nan, 10), + (10, nan), + (nan, pinf), + (pinf, nan), + (nan, nan) + ) + for op1, op2 in cases: + vdata_ab = self.load([op1, op2]*hf_nlanes) + data = test_nan(op1, op2) + simd = reduce_intrin(vdata_ab) + assert simd == pytest.approx(data, nan_ok=True) + vdata_a = self.setall(op1) + vdata_b = self.setall(op2) + data = [data] * self.nlanes + simd = intrin(vdata_a, vdata_b) + assert simd == pytest.approx(data, nan_ok=True) + + def test_reciprocal(self): + pinf, ninf, nan = self._pinfinity(), self._ninfinity(), self._nan() + data = self._data() + vdata = self.load(self._data()) + + recip_cases = ((nan, nan), (pinf, 0.0), (ninf, -0.0), (0.0, pinf), (-0.0, ninf)) + for case, desired in recip_cases: + data_recip = [desired]*self.nlanes + recip = self.recip(self.setall(case)) + assert recip == pytest.approx(data_recip, nan_ok=True) + + data_recip = self.load([1/x for x in data]) # load to truncate precision + recip = self.recip(vdata) + assert recip == data_recip + + def test_special_cases(self): + """ + Compare Not NaN. Test intrinsics: + npyv_notnan_##SFX + """ + nnan = self.notnan(self.setall(self._nan())) + assert nnan == [0]*self.nlanes + + @pytest.mark.parametrize("intrin_name", [ + "rint", "trunc", "ceil", "floor" + ]) + def test_unary_invalid_fpexception(self, intrin_name): + intrin = getattr(self, intrin_name) + for d in [float("nan"), float("inf"), -float("inf")]: + v = self.setall(d) + clear_floatstatus() + intrin(v) + assert check_floatstatus(invalid=True) == False + + @pytest.mark.parametrize('py_comp,np_comp', [ + (operator.lt, "cmplt"), + (operator.le, "cmple"), + (operator.gt, "cmpgt"), + (operator.ge, "cmpge"), + (operator.eq, "cmpeq"), + (operator.ne, "cmpneq") + ]) + def test_comparison_with_nan(self, py_comp, np_comp): + pinf, ninf, nan = self._pinfinity(), self._ninfinity(), self._nan() + mask_true = self._true_mask() + + def to_bool(vector): + return [lane == mask_true for lane in vector] + + intrin = getattr(self, np_comp) + cmp_cases = ((0, nan), (nan, 0), (nan, nan), (pinf, nan), + (ninf, nan), (-0.0, +0.0)) + for case_operand1, case_operand2 in cmp_cases: + data_a = [case_operand1]*self.nlanes + data_b = [case_operand2]*self.nlanes + vdata_a = self.setall(case_operand1) + vdata_b = self.setall(case_operand2) + vcmp = to_bool(intrin(vdata_a, vdata_b)) + data_cmp = [py_comp(a, b) for a, b in zip(data_a, data_b)] + assert vcmp == data_cmp + + @pytest.mark.parametrize("intrin", ["any", "all"]) + @pytest.mark.parametrize("data", ( + [float("nan"), 0], + [0, float("nan")], + [float("nan"), 1], + [1, float("nan")], + [float("nan"), float("nan")], + [0.0, -0.0], + [-0.0, 0.0], + [1.0, -0.0] + )) + def test_operators_crosstest(self, intrin, data): + """ + Test intrinsics: + npyv_any_##SFX + npyv_all_##SFX + """ + data_a = self.load(data * self.nlanes) + func = eval(intrin) + intrin = getattr(self, intrin) + desired = func(data_a) + simd = intrin(data_a) + assert not not simd == desired + +class _SIMD_ALL(_Test_Utility): + """ + To test all vector types at once + """ + def test_memory_load(self): + data = self._data() + # unaligned load + load_data = self.load(data) + assert load_data == data + # aligned load + loada_data = self.loada(data) + assert loada_data == data + # stream load + loads_data = self.loads(data) + assert loads_data == data + # load lower part + loadl = self.loadl(data) + loadl_half = list(loadl)[:self.nlanes//2] + data_half = data[:self.nlanes//2] + assert loadl_half == data_half + assert loadl != data # detect overflow + + def test_memory_store(self): + data = self._data() + vdata = self.load(data) + # unaligned store + store = [0] * self.nlanes + self.store(store, vdata) + assert store == data + # aligned store + store_a = [0] * self.nlanes + self.storea(store_a, vdata) + assert store_a == data + # stream store + store_s = [0] * self.nlanes + self.stores(store_s, vdata) + assert store_s == data + # store lower part + store_l = [0] * self.nlanes + self.storel(store_l, vdata) + assert store_l[:self.nlanes//2] == data[:self.nlanes//2] + assert store_l != vdata # detect overflow + # store higher part + store_h = [0] * self.nlanes + self.storeh(store_h, vdata) + assert store_h[:self.nlanes//2] == data[self.nlanes//2:] + assert store_h != vdata # detect overflow + + @pytest.mark.parametrize("intrin, elsizes, scale, fill", [ + ("self.load_tillz, self.load_till", (32, 64), 1, [0xffff]), + ("self.load2_tillz, self.load2_till", (32, 64), 2, [0xffff, 0x7fff]), + ]) + def test_memory_partial_load(self, intrin, elsizes, scale, fill): + if self._scalar_size() not in elsizes: + return + npyv_load_tillz, npyv_load_till = eval(intrin) + data = self._data() + lanes = list(range(1, self.nlanes + 1)) + lanes += [self.nlanes**2, self.nlanes**4] # test out of range + for n in lanes: + load_till = npyv_load_till(data, n, *fill) + load_tillz = npyv_load_tillz(data, n) + n *= scale + data_till = data[:n] + fill * ((self.nlanes-n) // scale) + assert load_till == data_till + data_tillz = data[:n] + [0] * (self.nlanes-n) + assert load_tillz == data_tillz + + @pytest.mark.parametrize("intrin, elsizes, scale", [ + ("self.store_till", (32, 64), 1), + ("self.store2_till", (32, 64), 2), + ]) + def test_memory_partial_store(self, intrin, elsizes, scale): + if self._scalar_size() not in elsizes: + return + npyv_store_till = eval(intrin) + data = self._data() + data_rev = self._data(reverse=True) + vdata = self.load(data) + lanes = list(range(1, self.nlanes + 1)) + lanes += [self.nlanes**2, self.nlanes**4] + for n in lanes: + data_till = data_rev.copy() + data_till[:n*scale] = data[:n*scale] + store_till = self._data(reverse=True) + npyv_store_till(store_till, n, vdata) + assert store_till == data_till + + @pytest.mark.parametrize("intrin, elsizes, scale", [ + ("self.loadn", (32, 64), 1), + ("self.loadn2", (32, 64), 2), + ]) + def test_memory_noncont_load(self, intrin, elsizes, scale): + if self._scalar_size() not in elsizes: + return + npyv_loadn = eval(intrin) + for stride in range(-64, 64): + if stride < 0: + data = self._data(stride, -stride*self.nlanes) + data_stride = list(itertools.chain( + *zip(*[data[-i::stride] for i in range(scale, 0, -1)]) + )) + elif stride == 0: + data = self._data() + data_stride = data[0:scale] * (self.nlanes//scale) + else: + data = self._data(count=stride*self.nlanes) + data_stride = list(itertools.chain( + *zip(*[data[i::stride] for i in range(scale)])) + ) + data_stride = self.load(data_stride) # cast unsigned + loadn = npyv_loadn(data, stride) + assert loadn == data_stride + + @pytest.mark.parametrize("intrin, elsizes, scale, fill", [ + ("self.loadn_tillz, self.loadn_till", (32, 64), 1, [0xffff]), + ("self.loadn2_tillz, self.loadn2_till", (32, 64), 2, [0xffff, 0x7fff]), + ]) + def test_memory_noncont_partial_load(self, intrin, elsizes, scale, fill): + if self._scalar_size() not in elsizes: + return + npyv_loadn_tillz, npyv_loadn_till = eval(intrin) + lanes = list(range(1, self.nlanes + 1)) + lanes += [self.nlanes**2, self.nlanes**4] + for stride in range(-64, 64): + if stride < 0: + data = self._data(stride, -stride*self.nlanes) + data_stride = list(itertools.chain( + *zip(*[data[-i::stride] for i in range(scale, 0, -1)]) + )) + elif stride == 0: + data = self._data() + data_stride = data[0:scale] * (self.nlanes//scale) + else: + data = self._data(count=stride*self.nlanes) + data_stride = list(itertools.chain( + *zip(*[data[i::stride] for i in range(scale)]) + )) + data_stride = list(self.load(data_stride)) # cast unsigned + for n in lanes: + nscale = n * scale + llanes = self.nlanes - nscale + data_stride_till = ( + data_stride[:nscale] + fill * (llanes//scale) + ) + loadn_till = npyv_loadn_till(data, stride, n, *fill) + assert loadn_till == data_stride_till + data_stride_tillz = data_stride[:nscale] + [0] * llanes + loadn_tillz = npyv_loadn_tillz(data, stride, n) + assert loadn_tillz == data_stride_tillz + + @pytest.mark.parametrize("intrin, elsizes, scale", [ + ("self.storen", (32, 64), 1), + ("self.storen2", (32, 64), 2), + ]) + def test_memory_noncont_store(self, intrin, elsizes, scale): + if self._scalar_size() not in elsizes: + return + npyv_storen = eval(intrin) + data = self._data() + vdata = self.load(data) + hlanes = self.nlanes // scale + for stride in range(1, 64): + data_storen = [0xff] * stride * self.nlanes + for s in range(0, hlanes*stride, stride): + i = (s//stride)*scale + data_storen[s:s+scale] = data[i:i+scale] + storen = [0xff] * stride * self.nlanes + storen += [0x7f]*64 + npyv_storen(storen, stride, vdata) + assert storen[:-64] == data_storen + assert storen[-64:] == [0x7f]*64 # detect overflow + + for stride in range(-64, 0): + data_storen = [0xff] * -stride * self.nlanes + for s in range(0, hlanes*stride, stride): + i = (s//stride)*scale + data_storen[s-scale:s or None] = data[i:i+scale] + storen = [0x7f]*64 + storen += [0xff] * -stride * self.nlanes + npyv_storen(storen, stride, vdata) + assert storen[64:] == data_storen + assert storen[:64] == [0x7f]*64 # detect overflow + # stride 0 + data_storen = [0x7f] * self.nlanes + storen = data_storen.copy() + data_storen[0:scale] = data[-scale:] + npyv_storen(storen, 0, vdata) + assert storen == data_storen + + @pytest.mark.parametrize("intrin, elsizes, scale", [ + ("self.storen_till", (32, 64), 1), + ("self.storen2_till", (32, 64), 2), + ]) + def test_memory_noncont_partial_store(self, intrin, elsizes, scale): + if self._scalar_size() not in elsizes: + return + npyv_storen_till = eval(intrin) + data = self._data() + vdata = self.load(data) + lanes = list(range(1, self.nlanes + 1)) + lanes += [self.nlanes**2, self.nlanes**4] + hlanes = self.nlanes // scale + for stride in range(1, 64): + for n in lanes: + data_till = [0xff] * stride * self.nlanes + tdata = data[:n*scale] + [0xff] * (self.nlanes-n*scale) + for s in range(0, hlanes*stride, stride)[:n]: + i = (s//stride)*scale + data_till[s:s+scale] = tdata[i:i+scale] + storen_till = [0xff] * stride * self.nlanes + storen_till += [0x7f]*64 + npyv_storen_till(storen_till, stride, n, vdata) + assert storen_till[:-64] == data_till + assert storen_till[-64:] == [0x7f]*64 # detect overflow + + for stride in range(-64, 0): + for n in lanes: + data_till = [0xff] * -stride * self.nlanes + tdata = data[:n*scale] + [0xff] * (self.nlanes-n*scale) + for s in range(0, hlanes*stride, stride)[:n]: + i = (s//stride)*scale + data_till[s-scale:s or None] = tdata[i:i+scale] + storen_till = [0x7f]*64 + storen_till += [0xff] * -stride * self.nlanes + npyv_storen_till(storen_till, stride, n, vdata) + assert storen_till[64:] == data_till + assert storen_till[:64] == [0x7f]*64 # detect overflow + + # stride 0 + for n in lanes: + data_till = [0x7f] * self.nlanes + storen_till = data_till.copy() + data_till[0:scale] = data[:n*scale][-scale:] + npyv_storen_till(storen_till, 0, n, vdata) + assert storen_till == data_till + + @pytest.mark.parametrize("intrin, table_size, elsize", [ + ("self.lut32", 32, 32), + ("self.lut16", 16, 64) + ]) + def test_lut(self, intrin, table_size, elsize): + """ + Test lookup table intrinsics: + npyv_lut32_##sfx + npyv_lut16_##sfx + """ + if elsize != self._scalar_size(): + return + intrin = eval(intrin) + idx_itrin = getattr(self.npyv, f"setall_u{elsize}") + table = range(0, table_size) + for i in table: + broadi = self.setall(i) + idx = idx_itrin(i) + lut = intrin(table, idx) + assert lut == broadi + + def test_misc(self): + broadcast_zero = self.zero() + assert broadcast_zero == [0] * self.nlanes + for i in range(1, 10): + broadcasti = self.setall(i) + assert broadcasti == [i] * self.nlanes + + data_a, data_b = self._data(), self._data(reverse=True) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + + # py level of npyv_set_* don't support ignoring the extra specified lanes or + # fill non-specified lanes with zero. + vset = self.set(*data_a) + assert vset == data_a + # py level of npyv_setf_* don't support ignoring the extra specified lanes or + # fill non-specified lanes with the specified scalar. + vsetf = self.setf(10, *data_a) + assert vsetf == data_a + + # We're testing the sanity of _simd's type-vector, + # reinterpret* intrinsics itself are tested via compiler + # during the build of _simd module + sfxes = ["u8", "s8", "u16", "s16", "u32", "s32", "u64", "s64"] + if self.npyv.simd_f64: + sfxes.append("f64") + if self.npyv.simd_f32: + sfxes.append("f32") + for sfx in sfxes: + vec_name = getattr(self, "reinterpret_" + sfx)(vdata_a).__name__ + assert vec_name == "npyv_" + sfx + + # select & mask operations + select_a = self.select(self.cmpeq(self.zero(), self.zero()), vdata_a, vdata_b) + assert select_a == data_a + select_b = self.select(self.cmpneq(self.zero(), self.zero()), vdata_a, vdata_b) + assert select_b == data_b + + # test extract elements + assert self.extract0(vdata_b) == vdata_b[0] + + # cleanup intrinsic is only used with AVX for + # zeroing registers to avoid the AVX-SSE transition penalty, + # so nothing to test here + self.npyv.cleanup() + + def test_reorder(self): + data_a, data_b = self._data(), self._data(reverse=True) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + # lower half part + data_a_lo = data_a[:self.nlanes//2] + data_b_lo = data_b[:self.nlanes//2] + # higher half part + data_a_hi = data_a[self.nlanes//2:] + data_b_hi = data_b[self.nlanes//2:] + # combine two lower parts + combinel = self.combinel(vdata_a, vdata_b) + assert combinel == data_a_lo + data_b_lo + # combine two higher parts + combineh = self.combineh(vdata_a, vdata_b) + assert combineh == data_a_hi + data_b_hi + # combine x2 + combine = self.combine(vdata_a, vdata_b) + assert combine == (data_a_lo + data_b_lo, data_a_hi + data_b_hi) + + # zip(interleave) + data_zipl = self.load([ + v for p in zip(data_a_lo, data_b_lo) for v in p + ]) + data_ziph = self.load([ + v for p in zip(data_a_hi, data_b_hi) for v in p + ]) + vzip = self.zip(vdata_a, vdata_b) + assert vzip == (data_zipl, data_ziph) + vzip = [0]*self.nlanes*2 + self._x2("store")(vzip, (vdata_a, vdata_b)) + assert vzip == list(data_zipl) + list(data_ziph) + + # unzip(deinterleave) + unzip = self.unzip(data_zipl, data_ziph) + assert unzip == (data_a, data_b) + unzip = self._x2("load")(list(data_zipl) + list(data_ziph)) + assert unzip == (data_a, data_b) + + def test_reorder_rev64(self): + # Reverse elements of each 64-bit lane + ssize = self._scalar_size() + if ssize == 64: + return + data_rev64 = [ + y for x in range(0, self.nlanes, 64//ssize) + for y in reversed(range(x, x + 64//ssize)) + ] + rev64 = self.rev64(self.load(range(self.nlanes))) + assert rev64 == data_rev64 + + def test_reorder_permi128(self): + """ + Test permuting elements for each 128-bit lane. + npyv_permi128_##sfx + """ + ssize = self._scalar_size() + if ssize < 32: + return + data = self.load(self._data()) + permn = 128//ssize + permd = permn-1 + nlane128 = self.nlanes//permn + shfl = [0, 1] if ssize == 64 else [0, 2, 4, 6] + for i in range(permn): + indices = [(i >> shf) & permd for shf in shfl] + vperm = self.permi128(data, *indices) + data_vperm = [ + data[j + (e & -permn)] + for e, j in enumerate(indices*nlane128) + ] + assert vperm == data_vperm + + @pytest.mark.parametrize('func, intrin', [ + (operator.lt, "cmplt"), + (operator.le, "cmple"), + (operator.gt, "cmpgt"), + (operator.ge, "cmpge"), + (operator.eq, "cmpeq") + ]) + def test_operators_comparison(self, func, intrin): + if self._is_fp(): + data_a = self._data() + else: + data_a = self._data(self._int_max() - self.nlanes) + data_b = self._data(self._int_min(), reverse=True) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + intrin = getattr(self, intrin) + + mask_true = self._true_mask() + def to_bool(vector): + return [lane == mask_true for lane in vector] + + data_cmp = [func(a, b) for a, b in zip(data_a, data_b)] + cmp = to_bool(intrin(vdata_a, vdata_b)) + assert cmp == data_cmp + + def test_operators_logical(self): + if self._is_fp(): + data_a = self._data() + else: + data_a = self._data(self._int_max() - self.nlanes) + data_b = self._data(self._int_min(), reverse=True) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + + if self._is_fp(): + data_cast_a = self._to_unsigned(vdata_a) + data_cast_b = self._to_unsigned(vdata_b) + cast, cast_data = self._to_unsigned, self._to_unsigned + else: + data_cast_a, data_cast_b = data_a, data_b + cast, cast_data = lambda a: a, self.load + + data_xor = cast_data([a ^ b for a, b in zip(data_cast_a, data_cast_b)]) + vxor = cast(self.xor(vdata_a, vdata_b)) + assert vxor == data_xor + + data_or = cast_data([a | b for a, b in zip(data_cast_a, data_cast_b)]) + vor = cast(getattr(self, "or")(vdata_a, vdata_b)) + assert vor == data_or + + data_and = cast_data([a & b for a, b in zip(data_cast_a, data_cast_b)]) + vand = cast(getattr(self, "and")(vdata_a, vdata_b)) + assert vand == data_and + + data_not = cast_data([~a for a in data_cast_a]) + vnot = cast(getattr(self, "not")(vdata_a)) + assert vnot == data_not + + if self.sfx not in ("u8"): + return + data_andc = [a & ~b for a, b in zip(data_cast_a, data_cast_b)] + vandc = cast(getattr(self, "andc")(vdata_a, vdata_b)) + assert vandc == data_andc + + @pytest.mark.parametrize("intrin", ["any", "all"]) + @pytest.mark.parametrize("data", ( + [1, 2, 3, 4], + [-1, -2, -3, -4], + [0, 1, 2, 3, 4], + [0x7f, 0x7fff, 0x7fffffff, 0x7fffffffffffffff], + [0, -1, -2, -3, 4], + [0], + [1], + [-1] + )) + def test_operators_crosstest(self, intrin, data): + """ + Test intrinsics: + npyv_any_##SFX + npyv_all_##SFX + """ + data_a = self.load(data * self.nlanes) + func = eval(intrin) + intrin = getattr(self, intrin) + desired = func(data_a) + simd = intrin(data_a) + assert not not simd == desired + + def test_conversion_boolean(self): + bsfx = "b" + self.sfx[1:] + to_boolean = getattr(self.npyv, "cvt_%s_%s" % (bsfx, self.sfx)) + from_boolean = getattr(self.npyv, "cvt_%s_%s" % (self.sfx, bsfx)) + + false_vb = to_boolean(self.setall(0)) + true_vb = self.cmpeq(self.setall(0), self.setall(0)) + assert false_vb != true_vb + + false_vsfx = from_boolean(false_vb) + true_vsfx = from_boolean(true_vb) + assert false_vsfx != true_vsfx + + def test_conversion_expand(self): + """ + Test expand intrinsics: + npyv_expand_u16_u8 + npyv_expand_u32_u16 + """ + if self.sfx not in ("u8", "u16"): + return + totype = self.sfx[0]+str(int(self.sfx[1:])*2) + expand = getattr(self.npyv, f"expand_{totype}_{self.sfx}") + # close enough from the edge to detect any deviation + data = self._data(self._int_max() - self.nlanes) + vdata = self.load(data) + edata = expand(vdata) + # lower half part + data_lo = data[:self.nlanes//2] + # higher half part + data_hi = data[self.nlanes//2:] + assert edata == (data_lo, data_hi) + + def test_arithmetic_subadd(self): + if self._is_fp(): + data_a = self._data() + else: + data_a = self._data(self._int_max() - self.nlanes) + data_b = self._data(self._int_min(), reverse=True) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + + # non-saturated + data_add = self.load([a + b for a, b in zip(data_a, data_b)]) # load to cast + add = self.add(vdata_a, vdata_b) + assert add == data_add + data_sub = self.load([a - b for a, b in zip(data_a, data_b)]) + sub = self.sub(vdata_a, vdata_b) + assert sub == data_sub + + def test_arithmetic_mul(self): + if self.sfx in ("u64", "s64"): + return + + if self._is_fp(): + data_a = self._data() + else: + data_a = self._data(self._int_max() - self.nlanes) + data_b = self._data(self._int_min(), reverse=True) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + + data_mul = self.load([a * b for a, b in zip(data_a, data_b)]) + mul = self.mul(vdata_a, vdata_b) + assert mul == data_mul + + def test_arithmetic_div(self): + if not self._is_fp(): + return + + data_a, data_b = self._data(), self._data(reverse=True) + vdata_a, vdata_b = self.load(data_a), self.load(data_b) + + # load to truncate f64 to precision of f32 + data_div = self.load([a / b for a, b in zip(data_a, data_b)]) + div = self.div(vdata_a, vdata_b) + assert div == data_div + + def test_arithmetic_intdiv(self): + """ + Test integer division intrinsics: + npyv_divisor_##sfx + npyv_divc_##sfx + """ + if self._is_fp(): + return + + int_min = self._int_min() + def trunc_div(a, d): + """ + Divide towards zero works with large integers > 2^53, + and wrap around overflow similar to what C does. + """ + if d == -1 and a == int_min: + return a + sign_a, sign_d = a < 0, d < 0 + if a == 0 or sign_a == sign_d: + return a // d + return (a + sign_d - sign_a) // d + 1 + + data = [1, -int_min] # to test overflow + data += range(0, 2**8, 2**5) + data += range(0, 2**8, 2**5-1) + bsize = self._scalar_size() + if bsize > 8: + data += range(2**8, 2**16, 2**13) + data += range(2**8, 2**16, 2**13-1) + if bsize > 16: + data += range(2**16, 2**32, 2**29) + data += range(2**16, 2**32, 2**29-1) + if bsize > 32: + data += range(2**32, 2**64, 2**61) + data += range(2**32, 2**64, 2**61-1) + # negate + data += [-x for x in data] + for dividend, divisor in itertools.product(data, data): + divisor = self.setall(divisor)[0] # cast + if divisor == 0: + continue + dividend = self.load(self._data(dividend)) + data_divc = [trunc_div(a, divisor) for a in dividend] + divisor_parms = self.divisor(divisor) + divc = self.divc(dividend, divisor_parms) + assert divc == data_divc + + def test_arithmetic_reduce_sum(self): + """ + Test reduce sum intrinsics: + npyv_sum_##sfx + """ + if self.sfx not in ("u32", "u64", "f32", "f64"): + return + # reduce sum + data = self._data() + vdata = self.load(data) + + data_sum = sum(data) + vsum = self.sum(vdata) + assert vsum == data_sum + + def test_arithmetic_reduce_sumup(self): + """ + Test extend reduce sum intrinsics: + npyv_sumup_##sfx + """ + if self.sfx not in ("u8", "u16"): + return + rdata = (0, self.nlanes, self._int_min(), self._int_max()-self.nlanes) + for r in rdata: + data = self._data(r) + vdata = self.load(data) + data_sum = sum(data) + vsum = self.sumup(vdata) + assert vsum == data_sum + + def test_mask_conditional(self): + """ + Conditional addition and subtraction for all supported data types. + Test intrinsics: + npyv_ifadd_##SFX, npyv_ifsub_##SFX + """ + vdata_a = self.load(self._data()) + vdata_b = self.load(self._data(reverse=True)) + true_mask = self.cmpeq(self.zero(), self.zero()) + false_mask = self.cmpneq(self.zero(), self.zero()) + + data_sub = self.sub(vdata_b, vdata_a) + ifsub = self.ifsub(true_mask, vdata_b, vdata_a, vdata_b) + assert ifsub == data_sub + ifsub = self.ifsub(false_mask, vdata_a, vdata_b, vdata_b) + assert ifsub == vdata_b + + data_add = self.add(vdata_b, vdata_a) + ifadd = self.ifadd(true_mask, vdata_b, vdata_a, vdata_b) + assert ifadd == data_add + ifadd = self.ifadd(false_mask, vdata_a, vdata_b, vdata_b) + assert ifadd == vdata_b + + if not self._is_fp(): + return + data_div = self.div(vdata_b, vdata_a) + ifdiv = self.ifdiv(true_mask, vdata_b, vdata_a, vdata_b) + assert ifdiv == data_div + ifdivz = self.ifdivz(true_mask, vdata_b, vdata_a) + assert ifdivz == data_div + ifdiv = self.ifdiv(false_mask, vdata_a, vdata_b, vdata_b) + assert ifdiv == vdata_b + ifdivz = self.ifdivz(false_mask, vdata_a, vdata_b) + assert ifdivz == self.zero() + +bool_sfx = ("b8", "b16", "b32", "b64") +int_sfx = ("u8", "s8", "u16", "s16", "u32", "s32", "u64", "s64") +fp_sfx = ("f32", "f64") +all_sfx = int_sfx + fp_sfx +tests_registry = { + bool_sfx: _SIMD_BOOL, + int_sfx : _SIMD_INT, + fp_sfx : _SIMD_FP, + ("f32",): _SIMD_FP32, + ("f64",): _SIMD_FP64, + all_sfx : _SIMD_ALL +} +for target_name, npyv in targets.items(): + simd_width = npyv.simd if npyv else '' + pretty_name = target_name.split('__') # multi-target separator + if len(pretty_name) > 1: + # multi-target + pretty_name = f"({' '.join(pretty_name)})" + else: + pretty_name = pretty_name[0] + + skip = "" + skip_sfx = dict() + if not npyv: + skip = f"target '{pretty_name}' isn't supported by current machine" + elif not npyv.simd: + skip = f"target '{pretty_name}' isn't supported by NPYV" + else: + if not npyv.simd_f32: + skip_sfx["f32"] = f"target '{pretty_name}' "\ + "doesn't support single-precision" + if not npyv.simd_f64: + skip_sfx["f64"] = f"target '{pretty_name}' doesn't"\ + "support double-precision" + + for sfxes, cls in tests_registry.items(): + for sfx in sfxes: + skip_m = skip_sfx.get(sfx, skip) + inhr = (cls,) + attr = dict(npyv=targets[target_name], sfx=sfx, target_name=target_name) + tcls = type(f"Test{cls.__name__}_{simd_width}_{target_name}_{sfx}", inhr, attr) + if skip_m: + pytest.mark.skip(reason=skip_m)(tcls) + globals()[tcls.__name__] = tcls diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_simd_module.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_simd_module.py new file mode 100644 index 0000000000000000000000000000000000000000..6bd68c22e1931e885081530913ea685325e94f96 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_simd_module.py @@ -0,0 +1,101 @@ +import pytest +from numpy._core._simd import targets +""" +This testing unit only for checking the sanity of common functionality, +therefore all we need is just to take one submodule that represents any +of enabled SIMD extensions to run the test on it and the second submodule +required to run only one check related to the possibility of mixing +the data types among each submodule. +""" +npyvs = [npyv_mod for npyv_mod in targets.values() if npyv_mod and npyv_mod.simd] +npyv, npyv2 = (npyvs + [None, None])[:2] + +unsigned_sfx = ["u8", "u16", "u32", "u64"] +signed_sfx = ["s8", "s16", "s32", "s64"] +fp_sfx = [] +if npyv and npyv.simd_f32: + fp_sfx.append("f32") +if npyv and npyv.simd_f64: + fp_sfx.append("f64") + +int_sfx = unsigned_sfx + signed_sfx +all_sfx = unsigned_sfx + int_sfx + +@pytest.mark.skipif(not npyv, reason="could not find any SIMD extension with NPYV support") +class Test_SIMD_MODULE: + + @pytest.mark.parametrize('sfx', all_sfx) + def test_num_lanes(self, sfx): + nlanes = getattr(npyv, "nlanes_" + sfx) + vector = getattr(npyv, "setall_" + sfx)(1) + assert len(vector) == nlanes + + @pytest.mark.parametrize('sfx', all_sfx) + def test_type_name(self, sfx): + vector = getattr(npyv, "setall_" + sfx)(1) + assert vector.__name__ == "npyv_" + sfx + + def test_raises(self): + a, b = [npyv.setall_u32(1)]*2 + for sfx in all_sfx: + vcb = lambda intrin: getattr(npyv, f"{intrin}_{sfx}") + pytest.raises(TypeError, vcb("add"), a) + pytest.raises(TypeError, vcb("add"), a, b, a) + pytest.raises(TypeError, vcb("setall")) + pytest.raises(TypeError, vcb("setall"), [1]) + pytest.raises(TypeError, vcb("load"), 1) + pytest.raises(ValueError, vcb("load"), [1]) + pytest.raises(ValueError, vcb("store"), [1], getattr(npyv, f"reinterpret_{sfx}_u32")(a)) + + @pytest.mark.skipif(not npyv2, reason=( + "could not find a second SIMD extension with NPYV support" + )) + def test_nomix(self): + # mix among submodules isn't allowed + a = npyv.setall_u32(1) + a2 = npyv2.setall_u32(1) + pytest.raises(TypeError, npyv.add_u32, a2, a2) + pytest.raises(TypeError, npyv2.add_u32, a, a) + + @pytest.mark.parametrize('sfx', unsigned_sfx) + def test_unsigned_overflow(self, sfx): + nlanes = getattr(npyv, "nlanes_" + sfx) + maxu = (1 << int(sfx[1:])) - 1 + maxu_72 = (1 << 72) - 1 + lane = getattr(npyv, "setall_" + sfx)(maxu_72)[0] + assert lane == maxu + lanes = getattr(npyv, "load_" + sfx)([maxu_72] * nlanes) + assert lanes == [maxu] * nlanes + lane = getattr(npyv, "setall_" + sfx)(-1)[0] + assert lane == maxu + lanes = getattr(npyv, "load_" + sfx)([-1] * nlanes) + assert lanes == [maxu] * nlanes + + @pytest.mark.parametrize('sfx', signed_sfx) + def test_signed_overflow(self, sfx): + nlanes = getattr(npyv, "nlanes_" + sfx) + maxs_72 = (1 << 71) - 1 + lane = getattr(npyv, "setall_" + sfx)(maxs_72)[0] + assert lane == -1 + lanes = getattr(npyv, "load_" + sfx)([maxs_72] * nlanes) + assert lanes == [-1] * nlanes + mins_72 = -1 << 71 + lane = getattr(npyv, "setall_" + sfx)(mins_72)[0] + assert lane == 0 + lanes = getattr(npyv, "load_" + sfx)([mins_72] * nlanes) + assert lanes == [0] * nlanes + + def test_truncate_f32(self): + if not npyv.simd_f32: + pytest.skip("F32 isn't support by the SIMD extension") + f32 = npyv.setall_f32(0.1)[0] + assert f32 != 0.1 + assert round(f32, 1) == 0.1 + + def test_compare(self): + data_range = range(0, npyv.nlanes_u32) + vdata = npyv.load_u32(data_range) + assert vdata == list(data_range) + assert vdata == tuple(data_range) + for i in data_range: + assert vdata[i] == data_range[i] diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_stringdtype.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_stringdtype.py new file mode 100644 index 0000000000000000000000000000000000000000..f4801fc0cb2a1d09ac8ff2386d05adf7ccbda1f2 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_stringdtype.py @@ -0,0 +1,1694 @@ +import concurrent.futures +import itertools +import os +import pickle +import string +import sys +import tempfile + +import numpy as np +import pytest + +from numpy.dtypes import StringDType +from numpy._core.tests._natype import pd_NA +from numpy.testing import assert_array_equal, IS_WASM + + +@pytest.fixture +def string_list(): + return ["abc", "def", "ghi" * 10, "A¢☃€ 😊" * 100, "Abc" * 1000, "DEF"] + + +@pytest.fixture +def random_string_list(): + chars = list(string.ascii_letters + string.digits) + chars = np.array(chars, dtype="U1") + ret = np.random.choice(chars, size=100 * 10, replace=True) + return ret.view("U100") + + +@pytest.fixture(params=[True, False]) +def coerce(request): + return request.param + + +@pytest.fixture( + params=["unset", None, pd_NA, np.nan, float("nan"), "__nan__"], + ids=["unset", "None", "pandas.NA", "np.nan", "float('nan')", "string nan"], +) +def na_object(request): + return request.param + + +def get_dtype(na_object, coerce=True): + # explicit is check for pd_NA because != with pd_NA returns pd_NA + if na_object is pd_NA or na_object != "unset": + return StringDType(na_object=na_object, coerce=coerce) + else: + return StringDType(coerce=coerce) + + +@pytest.fixture() +def dtype(na_object, coerce): + return get_dtype(na_object, coerce) + + +# second copy for cast tests to do a cartesian product over dtypes +@pytest.fixture(params=[True, False]) +def coerce2(request): + return request.param + + +@pytest.fixture( + params=["unset", None, pd_NA, np.nan, float("nan"), "__nan__"], + ids=["unset", "None", "pandas.NA", "np.nan", "float('nan')", "string nan"], +) +def na_object2(request): + return request.param + + +@pytest.fixture() +def dtype2(na_object2, coerce2): + # explicit is check for pd_NA because != with pd_NA returns pd_NA + if na_object2 is pd_NA or na_object2 != "unset": + return StringDType(na_object=na_object2, coerce=coerce2) + else: + return StringDType(coerce=coerce2) + + +def test_dtype_creation(): + hashes = set() + dt = StringDType() + assert not hasattr(dt, "na_object") and dt.coerce is True + hashes.add(hash(dt)) + + dt = StringDType(na_object=None) + assert dt.na_object is None and dt.coerce is True + hashes.add(hash(dt)) + + dt = StringDType(coerce=False) + assert not hasattr(dt, "na_object") and dt.coerce is False + hashes.add(hash(dt)) + + dt = StringDType(na_object=None, coerce=False) + assert dt.na_object is None and dt.coerce is False + hashes.add(hash(dt)) + + assert len(hashes) == 4 + + dt = np.dtype("T") + assert dt == StringDType() + assert dt.kind == "T" + assert dt.char == "T" + + hashes.add(hash(dt)) + assert len(hashes) == 4 + + +def test_dtype_equality(dtype): + assert dtype == dtype + for ch in "SU": + assert dtype != np.dtype(ch) + assert dtype != np.dtype(f"{ch}8") + + +def test_dtype_repr(dtype): + if not hasattr(dtype, "na_object") and dtype.coerce: + assert repr(dtype) == "StringDType()" + elif dtype.coerce: + assert repr(dtype) == f"StringDType(na_object={repr(dtype.na_object)})" + elif not hasattr(dtype, "na_object"): + assert repr(dtype) == "StringDType(coerce=False)" + else: + assert ( + repr(dtype) + == f"StringDType(na_object={repr(dtype.na_object)}, coerce=False)" + ) + + +def test_create_with_na(dtype): + if not hasattr(dtype, "na_object"): + pytest.skip("does not have an na object") + na_val = dtype.na_object + string_list = ["hello", na_val, "world"] + arr = np.array(string_list, dtype=dtype) + assert str(arr) == "[" + " ".join([repr(s) for s in string_list]) + "]" + assert arr[1] is dtype.na_object + + +@pytest.mark.parametrize("i", list(range(5))) +def test_set_replace_na(i): + # Test strings of various lengths can be set to NaN and then replaced. + s_empty = "" + s_short = "0123456789" + s_medium = "abcdefghijklmnopqrstuvwxyz" + s_long = "-=+" * 100 + strings = [s_medium, s_empty, s_short, s_medium, s_long] + a = np.array(strings, StringDType(na_object=np.nan)) + for s in [a[i], s_medium+s_short, s_short, s_empty, s_long]: + a[i] = np.nan + assert np.isnan(a[i]) + a[i] = s + assert a[i] == s + assert_array_equal(a, strings[:i] + [s] + strings[i+1:]) + + +def test_null_roundtripping(): + data = ["hello\0world", "ABC\0DEF\0\0"] + arr = np.array(data, dtype="T") + assert data[0] == arr[0] + assert data[1] == arr[1] + + +def test_string_too_large_error(): + arr = np.array(["a", "b", "c"], dtype=StringDType()) + with pytest.raises(MemoryError): + arr * (2**63 - 2) + + +@pytest.mark.parametrize( + "data", + [ + ["abc", "def", "ghi"], + ["🤣", "📵", "😰"], + ["🚜", "🙃", "😾"], + ["😹", "🚠", "🚌"], + ], +) +def test_array_creation_utf8(dtype, data): + arr = np.array(data, dtype=dtype) + assert str(arr) == "[" + " ".join(["'" + str(d) + "'" for d in data]) + "]" + assert arr.dtype == dtype + + +@pytest.mark.parametrize( + "data", + [ + [1, 2, 3], + [b"abc", b"def", b"ghi"], + [object, object, object], + ], +) +def test_scalars_string_conversion(data, dtype): + if dtype.coerce: + assert_array_equal( + np.array(data, dtype=dtype), + np.array([str(d) for d in data], dtype=dtype), + ) + else: + with pytest.raises(ValueError): + np.array(data, dtype=dtype) + + +@pytest.mark.parametrize( + ("strings"), + [ + ["this", "is", "an", "array"], + ["€", "", "😊"], + ["A¢☃€ 😊", " A☃€¢😊", "☃€😊 A¢", "😊☃A¢ €"], + ], +) +def test_self_casts(dtype, dtype2, strings): + if hasattr(dtype, "na_object"): + strings = strings + [dtype.na_object] + elif hasattr(dtype2, "na_object"): + strings = strings + [""] + arr = np.array(strings, dtype=dtype) + newarr = arr.astype(dtype2) + + if hasattr(dtype, "na_object") and not hasattr(dtype2, "na_object"): + assert newarr[-1] == str(dtype.na_object) + with pytest.raises(TypeError): + arr.astype(dtype2, casting="safe") + elif hasattr(dtype, "na_object") and hasattr(dtype2, "na_object"): + assert newarr[-1] is dtype2.na_object + arr.astype(dtype2, casting="safe") + elif hasattr(dtype2, "na_object"): + assert newarr[-1] == "" + arr.astype(dtype2, casting="safe") + else: + arr.astype(dtype2, casting="safe") + + if hasattr(dtype, "na_object") and hasattr(dtype2, "na_object"): + na1 = dtype.na_object + na2 = dtype2.na_object + if ((na1 is not na2 and + # check for pd_NA first because bool(pd_NA) is an error + ((na1 is pd_NA or na2 is pd_NA) or + # the second check is a NaN check, spelled this way + # to avoid errors from math.isnan and np.isnan + (na1 != na2 and not (na1 != na1 and na2 != na2))))): + with pytest.raises(TypeError): + arr[:-1] == newarr[:-1] + return + assert_array_equal(arr[:-1], newarr[:-1]) + + +@pytest.mark.parametrize( + ("strings"), + [ + ["this", "is", "an", "array"], + ["€", "", "😊"], + ["A¢☃€ 😊", " A☃€¢😊", "☃€😊 A¢", "😊☃A¢ €"], + ], +) +class TestStringLikeCasts: + def test_unicode_casts(self, dtype, strings): + arr = np.array(strings, dtype=np.str_).astype(dtype) + expected = np.array(strings, dtype=dtype) + assert_array_equal(arr, expected) + + arr_as_U8 = expected.astype("U8") + assert_array_equal(arr_as_U8, np.array(strings, dtype="U8")) + assert_array_equal(arr_as_U8.astype(dtype), arr) + arr_as_U3 = expected.astype("U3") + assert_array_equal(arr_as_U3, np.array(strings, dtype="U3")) + assert_array_equal( + arr_as_U3.astype(dtype), + np.array([s[:3] for s in strings], dtype=dtype), + ) + + def test_void_casts(self, dtype, strings): + sarr = np.array(strings, dtype=dtype) + utf8_bytes = [s.encode("utf-8") for s in strings] + void_dtype = f"V{max([len(s) for s in utf8_bytes])}" + varr = np.array(utf8_bytes, dtype=void_dtype) + assert_array_equal(varr, sarr.astype(void_dtype)) + assert_array_equal(varr.astype(dtype), sarr) + + def test_bytes_casts(self, dtype, strings): + sarr = np.array(strings, dtype=dtype) + try: + utf8_bytes = [s.encode("ascii") for s in strings] + bytes_dtype = f"S{max([len(s) for s in utf8_bytes])}" + barr = np.array(utf8_bytes, dtype=bytes_dtype) + assert_array_equal(barr, sarr.astype(bytes_dtype)) + assert_array_equal(barr.astype(dtype), sarr) + except UnicodeEncodeError: + with pytest.raises(UnicodeEncodeError): + sarr.astype("S20") + + +def test_additional_unicode_cast(random_string_list, dtype): + arr = np.array(random_string_list, dtype=dtype) + # test that this short-circuits correctly + assert_array_equal(arr, arr.astype(arr.dtype)) + # tests the casts via the comparison promoter + assert_array_equal(arr, arr.astype(random_string_list.dtype)) + + +def test_insert_scalar(dtype, string_list): + """Test that inserting a scalar works.""" + arr = np.array(string_list, dtype=dtype) + scalar_instance = "what" + arr[1] = scalar_instance + assert_array_equal( + arr, + np.array(string_list[:1] + ["what"] + string_list[2:], dtype=dtype), + ) + + +comparison_operators = [ + np.equal, + np.not_equal, + np.greater, + np.greater_equal, + np.less, + np.less_equal, +] + + +@pytest.mark.parametrize("op", comparison_operators) +@pytest.mark.parametrize("o_dtype", [np.str_, object, StringDType()]) +def test_comparisons(string_list, dtype, op, o_dtype): + sarr = np.array(string_list, dtype=dtype) + oarr = np.array(string_list, dtype=o_dtype) + + # test that comparison operators work + res = op(sarr, sarr) + ores = op(oarr, oarr) + # test that promotion works as well + orres = op(sarr, oarr) + olres = op(oarr, sarr) + + assert_array_equal(res, ores) + assert_array_equal(res, orres) + assert_array_equal(res, olres) + + # test we get the correct answer for unequal length strings + sarr2 = np.array([s + "2" for s in string_list], dtype=dtype) + oarr2 = np.array([s + "2" for s in string_list], dtype=o_dtype) + + res = op(sarr, sarr2) + ores = op(oarr, oarr2) + olres = op(oarr, sarr2) + orres = op(sarr, oarr2) + + assert_array_equal(res, ores) + assert_array_equal(res, olres) + assert_array_equal(res, orres) + + res = op(sarr2, sarr) + ores = op(oarr2, oarr) + olres = op(oarr2, sarr) + orres = op(sarr2, oarr) + + assert_array_equal(res, ores) + assert_array_equal(res, olres) + assert_array_equal(res, orres) + + +def test_isnan(dtype, string_list): + if not hasattr(dtype, "na_object"): + pytest.skip("no na support") + sarr = np.array(string_list + [dtype.na_object], dtype=dtype) + is_nan = isinstance(dtype.na_object, float) and np.isnan(dtype.na_object) + bool_errors = 0 + try: + bool(dtype.na_object) + except TypeError: + bool_errors = 1 + if is_nan or bool_errors: + # isnan is only true when na_object is a NaN + assert_array_equal( + np.isnan(sarr), + np.array([0] * len(string_list) + [1], dtype=np.bool), + ) + else: + assert not np.any(np.isnan(sarr)) + + +def _pickle_load(filename): + with open(filename, "rb") as f: + res = pickle.load(f) + + return res + +@pytest.mark.skipif(IS_WASM, reason="no threading support in wasm") +def test_pickle(dtype, string_list): + arr = np.array(string_list, dtype=dtype) + + with tempfile.NamedTemporaryFile("wb", delete=False) as f: + pickle.dump([arr, dtype], f) + + with open(f.name, "rb") as f: + res = pickle.load(f) + + assert_array_equal(res[0], arr) + assert res[1] == dtype + + # load the pickle in a subprocess to ensure the string data are + # actually stored in the pickle file + with concurrent.futures.ProcessPoolExecutor() as executor: + e = executor.submit(_pickle_load, f.name) + res = e.result() + + assert_array_equal(res[0], arr) + assert res[1] == dtype + + os.remove(f.name) + + +@pytest.mark.parametrize( + "strings", + [ + ["left", "right", "leftovers", "righty", "up", "down"], + [ + "left" * 10, + "right" * 10, + "leftovers" * 10, + "righty" * 10, + "up" * 10, + ], + ["🤣🤣", "🤣", "📵", "😰"], + ["🚜", "🙃", "😾"], + ["😹", "🚠", "🚌"], + ["A¢☃€ 😊", " A☃€¢😊", "☃€😊 A¢", "😊☃A¢ €"], + ], +) +def test_sort(dtype, strings): + """Test that sorting matches python's internal sorting.""" + + def test_sort(strings, arr_sorted): + arr = np.array(strings, dtype=dtype) + np.random.default_rng().shuffle(arr) + na_object = getattr(arr.dtype, "na_object", "") + if na_object is None and None in strings: + with pytest.raises( + ValueError, + match="Cannot compare null that is not a nan-like value", + ): + arr.sort() + else: + arr.sort() + assert np.array_equal(arr, arr_sorted, equal_nan=True) + + # make a copy so we don't mutate the lists in the fixture + strings = strings.copy() + arr_sorted = np.array(sorted(strings), dtype=dtype) + test_sort(strings, arr_sorted) + + if not hasattr(dtype, "na_object"): + return + + # make sure NAs get sorted to the end of the array and string NAs get + # sorted like normal strings + strings.insert(0, dtype.na_object) + strings.insert(2, dtype.na_object) + # can't use append because doing that with NA converts + # the result to object dtype + if not isinstance(dtype.na_object, str): + arr_sorted = np.array( + arr_sorted.tolist() + [dtype.na_object, dtype.na_object], + dtype=dtype, + ) + else: + arr_sorted = np.array(sorted(strings), dtype=dtype) + + test_sort(strings, arr_sorted) + + +@pytest.mark.parametrize( + "strings", + [ + ["A¢☃€ 😊", " A☃€¢😊", "☃€😊 A¢", "😊☃A¢ €"], + ["A¢☃€ 😊", "", " ", " "], + ["", "a", "😸", "ááðfáíóåéë"], + ], +) +def test_nonzero(strings, na_object): + dtype = get_dtype(na_object) + arr = np.array(strings, dtype=dtype) + is_nonzero = np.array( + [i for i, item in enumerate(strings) if len(item) != 0]) + assert_array_equal(arr.nonzero()[0], is_nonzero) + + if na_object is not pd_NA and na_object == 'unset': + return + + strings_with_na = np.array(strings + [na_object], dtype=dtype) + is_nan = np.isnan(np.array([dtype.na_object], dtype=dtype))[0] + + if is_nan: + assert strings_with_na.nonzero()[0][-1] == 4 + else: + assert strings_with_na.nonzero()[0][-1] == 3 + + # check that the casting to bool and nonzero give consistent results + assert_array_equal(strings_with_na[strings_with_na.nonzero()], + strings_with_na[strings_with_na.astype(bool)]) + + +def test_where(string_list, na_object): + dtype = get_dtype(na_object) + a = np.array(string_list, dtype=dtype) + b = a[::-1] + res = np.where([True, False, True, False, True, False], a, b) + assert_array_equal(res, [a[0], b[1], a[2], b[3], a[4], b[5]]) + + +def test_fancy_indexing(string_list): + sarr = np.array(string_list, dtype="T") + assert_array_equal(sarr, sarr[np.arange(sarr.shape[0])]) + + # see gh-27003 and gh-27053 + for ind in [[True, True], [0, 1], ...]: + for lop in [['a'*16, 'b'*16], ['', '']]: + a = np.array(lop, dtype="T") + rop = ['d'*16, 'e'*16] + for b in [rop, np.array(rop, dtype="T")]: + a[ind] = b + assert_array_equal(a, b) + assert a[0] == 'd'*16 + + +def test_creation_functions(): + assert_array_equal(np.zeros(3, dtype="T"), ["", "", ""]) + assert_array_equal(np.empty(3, dtype="T"), ["", "", ""]) + + assert np.zeros(3, dtype="T")[0] == "" + assert np.empty(3, dtype="T")[0] == "" + + +def test_concatenate(string_list): + sarr = np.array(string_list, dtype="T") + sarr_cat = np.array(string_list + string_list, dtype="T") + + assert_array_equal(np.concatenate([sarr], axis=0), sarr) + + +def test_create_with_copy_none(string_list): + arr = np.array(string_list, dtype=StringDType()) + # create another stringdtype array with an arena that has a different + # in-memory layout than the first array + arr_rev = np.array(string_list[::-1], dtype=StringDType()) + + # this should create a copy and the resulting array + # shouldn't share an allocator or arena with arr_rev, despite + # explicitly passing arr_rev.dtype + arr_copy = np.array(arr, copy=None, dtype=arr_rev.dtype) + np.testing.assert_array_equal(arr, arr_copy) + assert arr_copy.base is None + + with pytest.raises(ValueError, match="Unable to avoid copy"): + np.array(arr, copy=False, dtype=arr_rev.dtype) + + # because we're using arr's dtype instance, the view is safe + arr_view = np.array(arr, copy=None, dtype=arr.dtype) + np.testing.assert_array_equal(arr, arr) + np.testing.assert_array_equal(arr_view[::-1], arr_rev) + assert arr_view is arr + + +def test_astype_copy_false(): + orig_dt = StringDType() + arr = np.array(["hello", "world"], dtype=StringDType()) + assert not arr.astype(StringDType(coerce=False), copy=False).dtype.coerce + + assert arr.astype(orig_dt, copy=False).dtype is orig_dt + +@pytest.mark.parametrize( + "strings", + [ + ["left", "right", "leftovers", "righty", "up", "down"], + ["🤣🤣", "🤣", "📵", "😰"], + ["🚜", "🙃", "😾"], + ["😹", "🚠", "🚌"], + ["A¢☃€ 😊", " A☃€¢😊", "☃€😊 A¢", "😊☃A¢ €"], + ], +) +def test_argmax(strings): + """Test that argmax/argmin matches what python calculates.""" + arr = np.array(strings, dtype="T") + assert np.argmax(arr) == strings.index(max(strings)) + assert np.argmin(arr) == strings.index(min(strings)) + + +@pytest.mark.parametrize( + "arrfunc,expected", + [ + [np.sort, None], + [np.nonzero, (np.array([], dtype=np.int_),)], + [np.argmax, 0], + [np.argmin, 0], + ], +) +def test_arrfuncs_zeros(arrfunc, expected): + arr = np.zeros(10, dtype="T") + result = arrfunc(arr) + if expected is None: + expected = arr + assert_array_equal(result, expected, strict=True) + + +@pytest.mark.parametrize( + ("strings", "cast_answer", "any_answer", "all_answer"), + [ + [["hello", "world"], [True, True], True, True], + [["", ""], [False, False], False, False], + [["hello", ""], [True, False], True, False], + [["", "world"], [False, True], True, False], + ], +) +def test_cast_to_bool(strings, cast_answer, any_answer, all_answer): + sarr = np.array(strings, dtype="T") + assert_array_equal(sarr.astype("bool"), cast_answer) + + assert np.any(sarr) == any_answer + assert np.all(sarr) == all_answer + + +@pytest.mark.parametrize( + ("strings", "cast_answer"), + [ + [[True, True], ["True", "True"]], + [[False, False], ["False", "False"]], + [[True, False], ["True", "False"]], + [[False, True], ["False", "True"]], + ], +) +def test_cast_from_bool(strings, cast_answer): + barr = np.array(strings, dtype=bool) + assert_array_equal(barr.astype("T"), np.array(cast_answer, dtype="T")) + + +@pytest.mark.parametrize("bitsize", [8, 16, 32, 64]) +@pytest.mark.parametrize("signed", [True, False]) +def test_sized_integer_casts(bitsize, signed): + idtype = f"int{bitsize}" + if signed: + inp = [-(2**p - 1) for p in reversed(range(bitsize - 1))] + inp += [2**p - 1 for p in range(1, bitsize - 1)] + else: + idtype = "u" + idtype + inp = [2**p - 1 for p in range(bitsize)] + ainp = np.array(inp, dtype=idtype) + assert_array_equal(ainp, ainp.astype("T").astype(idtype)) + + # safe casting works + ainp.astype("T", casting="safe") + + with pytest.raises(TypeError): + ainp.astype("T").astype(idtype, casting="safe") + + oob = [str(2**bitsize), str(-(2**bitsize))] + with pytest.raises(OverflowError): + np.array(oob, dtype="T").astype(idtype) + + with pytest.raises(ValueError): + np.array(["1", np.nan, "3"], + dtype=StringDType(na_object=np.nan)).astype(idtype) + + +@pytest.mark.parametrize("typename", ["byte", "short", "int", "longlong"]) +@pytest.mark.parametrize("signed", ["", "u"]) +def test_unsized_integer_casts(typename, signed): + idtype = f"{signed}{typename}" + + inp = [1, 2, 3, 4] + ainp = np.array(inp, dtype=idtype) + assert_array_equal(ainp, ainp.astype("T").astype(idtype)) + + +@pytest.mark.parametrize( + "typename", + [ + pytest.param( + "longdouble", + marks=pytest.mark.xfail( + np.dtypes.LongDoubleDType() != np.dtypes.Float64DType(), + reason="numpy lacks an ld2a implementation", + strict=True, + ), + ), + "float64", + "float32", + "float16", + ], +) +def test_float_casts(typename): + inp = [1.1, 2.8, -3.2, 2.7e4] + ainp = np.array(inp, dtype=typename) + assert_array_equal(ainp, ainp.astype("T").astype(typename)) + + inp = [0.1] + sres = np.array(inp, dtype=typename).astype("T") + res = sres.astype(typename) + assert_array_equal(np.array(inp, dtype=typename), res) + assert sres[0] == "0.1" + + if typename == "longdouble": + # let's not worry about platform-dependent rounding of longdouble + return + + fi = np.finfo(typename) + + inp = [1e-324, fi.smallest_subnormal, -1e-324, -fi.smallest_subnormal] + eres = [0, fi.smallest_subnormal, -0, -fi.smallest_subnormal] + res = np.array(inp, dtype=typename).astype("T").astype(typename) + assert_array_equal(eres, res) + + inp = [2e308, fi.max, -2e308, fi.min] + eres = [np.inf, fi.max, -np.inf, fi.min] + res = np.array(inp, dtype=typename).astype("T").astype(typename) + assert_array_equal(eres, res) + + +@pytest.mark.parametrize( + "typename", + [ + "csingle", + "cdouble", + pytest.param( + "clongdouble", + marks=pytest.mark.xfail( + np.dtypes.CLongDoubleDType() != np.dtypes.Complex128DType(), + reason="numpy lacks an ld2a implementation", + strict=True, + ), + ), + ], +) +def test_cfloat_casts(typename): + inp = [1.1 + 1.1j, 2.8 + 2.8j, -3.2 - 3.2j, 2.7e4 + 2.7e4j] + ainp = np.array(inp, dtype=typename) + assert_array_equal(ainp, ainp.astype("T").astype(typename)) + + inp = [0.1 + 0.1j] + sres = np.array(inp, dtype=typename).astype("T") + res = sres.astype(typename) + assert_array_equal(np.array(inp, dtype=typename), res) + assert sres[0] == "(0.1+0.1j)" + + +def test_take(string_list): + sarr = np.array(string_list, dtype="T") + res = sarr.take(np.arange(len(string_list))) + assert_array_equal(sarr, res) + + # make sure it also works for out + out = np.empty(len(string_list), dtype="T") + out[0] = "hello" + res = sarr.take(np.arange(len(string_list)), out=out) + assert res is out + assert_array_equal(sarr, res) + + +@pytest.mark.parametrize("use_out", [True, False]) +@pytest.mark.parametrize( + "ufunc_name,func", + [ + ("min", min), + ("max", max), + ], +) +def test_ufuncs_minmax(string_list, ufunc_name, func, use_out): + """Test that the min/max ufuncs match Python builtin min/max behavior.""" + arr = np.array(string_list, dtype="T") + uarr = np.array(string_list, dtype=str) + res = np.array(func(string_list), dtype="T") + assert_array_equal(getattr(arr, ufunc_name)(), res) + + ufunc = getattr(np, ufunc_name + "imum") + + if use_out: + res = ufunc(arr, arr, out=arr) + else: + res = ufunc(arr, arr) + + assert_array_equal(uarr, res) + assert_array_equal(getattr(arr, ufunc_name)(), func(string_list)) + + +def test_max_regression(): + arr = np.array(['y', 'y', 'z'], dtype="T") + assert arr.max() == 'z' + + +@pytest.mark.parametrize("use_out", [True, False]) +@pytest.mark.parametrize( + "other_strings", + [ + ["abc", "def" * 500, "ghi" * 16, "🤣" * 100, "📵", "😰"], + ["🚜", "🙃", "😾", "😹", "🚠", "🚌"], + ["🥦", "¨", "⨯", "∰ ", "⨌ ", "⎶ "], + ], +) +def test_ufunc_add(dtype, string_list, other_strings, use_out): + arr1 = np.array(string_list, dtype=dtype) + arr2 = np.array(other_strings, dtype=dtype) + result = np.array([a + b for a, b in zip(arr1, arr2)], dtype=dtype) + + if use_out: + res = np.add(arr1, arr2, out=arr1) + else: + res = np.add(arr1, arr2) + + assert_array_equal(res, result) + + if not hasattr(dtype, "na_object"): + return + + is_nan = isinstance(dtype.na_object, float) and np.isnan(dtype.na_object) + is_str = isinstance(dtype.na_object, str) + bool_errors = 0 + try: + bool(dtype.na_object) + except TypeError: + bool_errors = 1 + + arr1 = np.array([dtype.na_object] + string_list, dtype=dtype) + arr2 = np.array(other_strings + [dtype.na_object], dtype=dtype) + + if is_nan or bool_errors or is_str: + res = np.add(arr1, arr2) + assert_array_equal(res[1:-1], arr1[1:-1] + arr2[1:-1]) + if not is_str: + assert res[0] is dtype.na_object and res[-1] is dtype.na_object + else: + assert res[0] == dtype.na_object + arr2[0] + assert res[-1] == arr1[-1] + dtype.na_object + else: + with pytest.raises(ValueError): + np.add(arr1, arr2) + + +def test_ufunc_add_reduce(dtype): + values = ["a", "this is a long string", "c"] + arr = np.array(values, dtype=dtype) + out = np.empty((), dtype=dtype) + + expected = np.array("".join(values), dtype=dtype) + assert_array_equal(np.add.reduce(arr), expected) + + np.add.reduce(arr, out=out) + assert_array_equal(out, expected) + + +def test_add_promoter(string_list): + arr = np.array(string_list, dtype=StringDType()) + lresult = np.array(["hello" + s for s in string_list], dtype=StringDType()) + rresult = np.array([s + "hello" for s in string_list], dtype=StringDType()) + + for op in ["hello", np.str_("hello"), np.array(["hello"])]: + assert_array_equal(op + arr, lresult) + assert_array_equal(arr + op, rresult) + + # The promoter should be able to handle things if users pass `dtype=` + res = np.add("hello", string_list, dtype=StringDType) + assert res.dtype == StringDType() + + # The promoter should not kick in if users override the input, + # which means arr is cast, this fails because of the unknown length. + with pytest.raises(TypeError, match="cannot cast dtype"): + np.add(arr, "add", signature=("U", "U", None), casting="unsafe") + + # But it must simply reject the following: + with pytest.raises(TypeError, match=".*did not contain a loop"): + np.add(arr, "add", signature=(None, "U", None)) + + with pytest.raises(TypeError, match=".*did not contain a loop"): + np.add("a", "b", signature=("U", "U", StringDType)) + + +def test_add_no_legacy_promote_with_signature(): + # Possibly misplaced, but useful to test with string DType. We check that + # if there is clearly no loop found, a stray `dtype=` doesn't break things + # Regression test for the bad error in gh-26735 + # (If legacy promotion is gone, this can be deleted...) + with pytest.raises(TypeError, match=".*did not contain a loop"): + np.add("3", 6, dtype=StringDType) + + +def test_add_promoter_reduce(): + # Exact TypeError could change, but ensure StringDtype doesn't match + with pytest.raises(TypeError, match="the resolved dtypes are not"): + np.add.reduce(np.array(["a", "b"], dtype="U")) + + # On the other hand, using `dtype=T` in the *ufunc* should work. + np.add.reduce(np.array(["a", "b"], dtype="U"), dtype=np.dtypes.StringDType) + + +def test_multiply_reduce(): + # At the time of writing (NumPy 2.0) this is very limited (and rather + # ridiculous anyway). But it works and actually makes some sense... + # (NumPy does not allow non-scalar initial values) + repeats = np.array([2, 3, 4]) + val = "school-🚌" + res = np.multiply.reduce(repeats, initial=val, dtype=np.dtypes.StringDType) + assert res == val * np.prod(repeats) + + +def test_multiply_two_string_raises(): + arr = np.array(["hello", "world"], dtype="T") + with pytest.raises(np._core._exceptions._UFuncNoLoopError): + np.multiply(arr, arr) + + +@pytest.mark.parametrize("use_out", [True, False]) +@pytest.mark.parametrize("other", [2, [2, 1, 3, 4, 1, 3]]) +@pytest.mark.parametrize( + "other_dtype", + [ + None, + "int8", + "int16", + "int32", + "int64", + "uint8", + "uint16", + "uint32", + "uint64", + "short", + "int", + "intp", + "long", + "longlong", + "ushort", + "uint", + "uintp", + "ulong", + "ulonglong", + ], +) +def test_ufunc_multiply(dtype, string_list, other, other_dtype, use_out): + """Test the two-argument ufuncs match python builtin behavior.""" + arr = np.array(string_list, dtype=dtype) + if other_dtype is not None: + other_dtype = np.dtype(other_dtype) + try: + len(other) + result = [s * o for s, o in zip(string_list, other)] + other = np.array(other) + if other_dtype is not None: + other = other.astype(other_dtype) + except TypeError: + if other_dtype is not None: + other = other_dtype.type(other) + result = [s * other for s in string_list] + + if use_out: + arr_cache = arr.copy() + lres = np.multiply(arr, other, out=arr) + assert_array_equal(lres, result) + arr[:] = arr_cache + assert lres is arr + arr *= other + assert_array_equal(arr, result) + arr[:] = arr_cache + rres = np.multiply(other, arr, out=arr) + assert rres is arr + assert_array_equal(rres, result) + else: + lres = arr * other + assert_array_equal(lres, result) + rres = other * arr + assert_array_equal(rres, result) + + if not hasattr(dtype, "na_object"): + return + + is_nan = np.isnan(np.array([dtype.na_object], dtype=dtype))[0] + is_str = isinstance(dtype.na_object, str) + bool_errors = 0 + try: + bool(dtype.na_object) + except TypeError: + bool_errors = 1 + + arr = np.array(string_list + [dtype.na_object], dtype=dtype) + + try: + len(other) + other = np.append(other, 3) + if other_dtype is not None: + other = other.astype(other_dtype) + except TypeError: + pass + + if is_nan or bool_errors or is_str: + for res in [arr * other, other * arr]: + assert_array_equal(res[:-1], result) + if not is_str: + assert res[-1] is dtype.na_object + else: + try: + assert res[-1] == dtype.na_object * other[-1] + except (IndexError, TypeError): + assert res[-1] == dtype.na_object * other + else: + with pytest.raises(TypeError): + arr * other + with pytest.raises(TypeError): + other * arr + + +DATETIME_INPUT = [ + np.datetime64("1923-04-14T12:43:12"), + np.datetime64("1994-06-21T14:43:15"), + np.datetime64("2001-10-15T04:10:32"), + np.datetime64("NaT"), + np.datetime64("1995-11-25T16:02:16"), + np.datetime64("2005-01-04T03:14:12"), + np.datetime64("2041-12-03T14:05:03"), +] + + +TIMEDELTA_INPUT = [ + np.timedelta64(12358, "s"), + np.timedelta64(23, "s"), + np.timedelta64(74, "s"), + np.timedelta64("NaT"), + np.timedelta64(23, "s"), + np.timedelta64(73, "s"), + np.timedelta64(7, "s"), +] + + +@pytest.mark.parametrize( + "input_data, input_dtype", + [ + (DATETIME_INPUT, "M8[s]"), + (TIMEDELTA_INPUT, "m8[s]") + ] +) +def test_datetime_timedelta_cast(dtype, input_data, input_dtype): + + a = np.array(input_data, dtype=input_dtype) + + has_na = hasattr(dtype, "na_object") + is_str = isinstance(getattr(dtype, "na_object", None), str) + + if not has_na or is_str: + a = np.delete(a, 3) + + sa = a.astype(dtype) + ra = sa.astype(a.dtype) + + if has_na and not is_str: + assert sa[3] is dtype.na_object + assert np.isnat(ra[3]) + + assert_array_equal(a, ra) + + if has_na and not is_str: + # don't worry about comparing how NaT is converted + sa = np.delete(sa, 3) + a = np.delete(a, 3) + + if input_dtype.startswith("M"): + assert_array_equal(sa, a.astype("U")) + else: + # The timedelta to unicode cast produces strings + # that aren't round-trippable and we don't want to + # reproduce that behavior in stringdtype + assert_array_equal(sa, a.astype("int64").astype("U")) + + +def test_nat_casts(): + s = 'nat' + all_nats = itertools.product(*zip(s.upper(), s.lower())) + all_nats = list(map(''.join, all_nats)) + NaT_dt = np.datetime64('NaT') + NaT_td = np.timedelta64('NaT') + for na_object in [np._NoValue, None, np.nan, 'nat', '']: + # numpy treats empty string and all case combinations of 'nat' as NaT + dtype = StringDType(na_object=na_object) + arr = np.array([''] + all_nats, dtype=dtype) + dt_array = arr.astype('M8[s]') + td_array = arr.astype('m8[s]') + assert_array_equal(dt_array, NaT_dt) + assert_array_equal(td_array, NaT_td) + + if na_object is np._NoValue: + output_object = 'NaT' + else: + output_object = na_object + + for arr in [dt_array, td_array]: + assert_array_equal( + arr.astype(dtype), + np.array([output_object]*arr.size, dtype=dtype)) + + +def test_nat_conversion(): + for nat in [np.datetime64("NaT", "s"), np.timedelta64("NaT", "s")]: + with pytest.raises(ValueError, match="string coercion is disabled"): + np.array(["a", nat], dtype=StringDType(coerce=False)) + + +def test_growing_strings(dtype): + # growing a string leads to a heap allocation, this tests to make sure + # we do that bookkeeping correctly for all possible starting cases + data = [ + "hello", # a short string + "abcdefghijklmnopqestuvwxyz", # a medium heap-allocated string + "hello" * 200, # a long heap-allocated string + ] + + arr = np.array(data, dtype=dtype) + uarr = np.array(data, dtype=str) + + for _ in range(5): + arr = arr + arr + uarr = uarr + uarr + + assert_array_equal(arr, uarr) + + +@pytest.mark.skipif(IS_WASM, reason="no threading support in wasm") +def test_threaded_access_and_mutation(dtype, random_string_list): + # this test uses an RNG and may crash or cause deadlocks if there is a + # threading bug + rng = np.random.default_rng(0x4D3D3D3) + + def func(arr): + rnd = rng.random() + # either write to random locations in the array, compute a ufunc, or + # re-initialize the array + if rnd < 0.25: + num = np.random.randint(0, arr.size) + arr[num] = arr[num] + "hello" + elif rnd < 0.5: + if rnd < 0.375: + np.add(arr, arr) + else: + np.add(arr, arr, out=arr) + elif rnd < 0.75: + if rnd < 0.875: + np.multiply(arr, np.int64(2)) + else: + np.multiply(arr, np.int64(2), out=arr) + else: + arr[:] = random_string_list + + with concurrent.futures.ThreadPoolExecutor(max_workers=8) as tpe: + arr = np.array(random_string_list, dtype=dtype) + futures = [tpe.submit(func, arr) for _ in range(500)] + + for f in futures: + f.result() + + +UFUNC_TEST_DATA = [ + "hello" * 10, + "Ae¢☃€ 😊" * 20, + "entry\nwith\nnewlines", + "entry\twith\ttabs", +] + + +@pytest.fixture +def string_array(dtype): + return np.array(UFUNC_TEST_DATA, dtype=dtype) + + +@pytest.fixture +def unicode_array(): + return np.array(UFUNC_TEST_DATA, dtype=np.str_) + + +NAN_PRESERVING_FUNCTIONS = [ + "capitalize", + "expandtabs", + "lower", + "lstrip", + "rstrip", + "splitlines", + "strip", + "swapcase", + "title", + "upper", +] + +BOOL_OUTPUT_FUNCTIONS = [ + "isalnum", + "isalpha", + "isdigit", + "islower", + "isspace", + "istitle", + "isupper", + "isnumeric", + "isdecimal", +] + +UNARY_FUNCTIONS = [ + "str_len", + "capitalize", + "expandtabs", + "isalnum", + "isalpha", + "isdigit", + "islower", + "isspace", + "istitle", + "isupper", + "lower", + "lstrip", + "rstrip", + "splitlines", + "strip", + "swapcase", + "title", + "upper", + "isnumeric", + "isdecimal", + "isalnum", + "islower", + "istitle", + "isupper", +] + +UNIMPLEMENTED_VEC_STRING_FUNCTIONS = [ + "capitalize", + "expandtabs", + "lower", + "splitlines", + "swapcase", + "title", + "upper", +] + +ONLY_IN_NP_CHAR = [ + "join", + "split", + "rsplit", + "splitlines" +] + + +@pytest.mark.parametrize("function_name", UNARY_FUNCTIONS) +def test_unary(string_array, unicode_array, function_name): + if function_name in ONLY_IN_NP_CHAR: + func = getattr(np.char, function_name) + else: + func = getattr(np.strings, function_name) + dtype = string_array.dtype + sres = func(string_array) + ures = func(unicode_array) + if sres.dtype == StringDType(): + ures = ures.astype(StringDType()) + assert_array_equal(sres, ures) + + if not hasattr(dtype, "na_object"): + return + + is_nan = np.isnan(np.array([dtype.na_object], dtype=dtype))[0] + is_str = isinstance(dtype.na_object, str) + na_arr = np.insert(string_array, 0, dtype.na_object) + + if function_name in UNIMPLEMENTED_VEC_STRING_FUNCTIONS: + if not is_str: + # to avoid these errors we'd need to add NA support to _vec_string + with pytest.raises((ValueError, TypeError)): + func(na_arr) + else: + if function_name == "splitlines": + assert func(na_arr)[0] == func(dtype.na_object)[()] + else: + assert func(na_arr)[0] == func(dtype.na_object) + return + if function_name == "str_len" and not is_str: + # str_len always errors for any non-string null, even NA ones because + # it has an integer result + with pytest.raises(ValueError): + func(na_arr) + return + if function_name in BOOL_OUTPUT_FUNCTIONS: + if is_nan: + assert func(na_arr)[0] is np.False_ + elif is_str: + assert func(na_arr)[0] == func(dtype.na_object) + else: + with pytest.raises(ValueError): + func(na_arr) + return + if not (is_nan or is_str): + with pytest.raises(ValueError): + func(na_arr) + return + res = func(na_arr) + if is_nan and function_name in NAN_PRESERVING_FUNCTIONS: + assert res[0] is dtype.na_object + elif is_str: + assert res[0] == func(dtype.na_object) + + +unicode_bug_fail = pytest.mark.xfail( + reason="unicode output width is buggy", strict=True +) + +# None means that the argument is a string array +BINARY_FUNCTIONS = [ + ("add", (None, None)), + ("multiply", (None, 2)), + ("mod", ("format: %s", None)), + pytest.param("center", (None, 25), marks=unicode_bug_fail), + ("count", (None, "A")), + ("encode", (None, "UTF-8")), + ("endswith", (None, "lo")), + ("find", (None, "A")), + ("index", (None, "e")), + ("join", ("-", None)), + ("lstrip", (None, "A")), + ("replace", (None, "A", "B")), + ("rfind", (None, "A")), + ("rindex", (None, "e")), + ("rsplit", (None, "A")), + ("rstrip", (None, "A")), + ("split", (None, "A")), + ("strip", (None, "A")), + ("startswith", (None, "A")), + pytest.param("zfill", (None, 12), marks=unicode_bug_fail), +] + +PASSES_THROUGH_NAN_NULLS = [ + "add", + "multiply", + "replace", + "strip", + "lstrip", + "rstrip", + "replace" + "zfill", +] + +NULLS_ARE_FALSEY = [ + "startswith", + "endswith", +] + +NULLS_ALWAYS_ERROR = [ + "count", + "find", + "rfind", +] + +SUPPORTS_NULLS = ( + PASSES_THROUGH_NAN_NULLS + + NULLS_ARE_FALSEY + + NULLS_ALWAYS_ERROR +) + + +def call_func(func, args, array, sanitize=True): + if args == (None, None): + return func(array, array) + if args[0] is None: + if sanitize: + san_args = tuple( + np.array(arg, dtype=array.dtype) if isinstance(arg, str) else + arg for arg in args[1:] + ) + else: + san_args = args[1:] + return func(array, *san_args) + if args[1] is None: + return func(args[0], array) + # shouldn't ever happen + assert 0 + + +@pytest.mark.parametrize("function_name, args", BINARY_FUNCTIONS) +def test_binary(string_array, unicode_array, function_name, args): + if function_name in ONLY_IN_NP_CHAR: + func = getattr(np.char, function_name) + else: + func = getattr(np.strings, function_name) + sres = call_func(func, args, string_array) + ures = call_func(func, args, unicode_array, sanitize=False) + if not isinstance(sres, tuple) and sres.dtype == StringDType(): + ures = ures.astype(StringDType()) + assert_array_equal(sres, ures) + + dtype = string_array.dtype + if function_name not in SUPPORTS_NULLS or not hasattr(dtype, "na_object"): + return + + na_arr = np.insert(string_array, 0, dtype.na_object) + is_nan = np.isnan(np.array([dtype.na_object], dtype=dtype))[0] + is_str = isinstance(dtype.na_object, str) + should_error = not (is_nan or is_str) + + if ( + (function_name in NULLS_ALWAYS_ERROR and not is_str) + or (function_name in PASSES_THROUGH_NAN_NULLS and should_error) + or (function_name in NULLS_ARE_FALSEY and should_error) + ): + with pytest.raises((ValueError, TypeError)): + call_func(func, args, na_arr) + return + + res = call_func(func, args, na_arr) + + if is_str: + assert res[0] == call_func(func, args, na_arr[:1]) + elif function_name in NULLS_ARE_FALSEY: + assert res[0] is np.False_ + elif function_name in PASSES_THROUGH_NAN_NULLS: + assert res[0] is dtype.na_object + else: + # shouldn't ever get here + assert 0 + + +@pytest.mark.parametrize("function, expected", [ + (np.strings.find, [[2, -1], [1, -1]]), + (np.strings.startswith, [[False, False], [True, False]])]) +@pytest.mark.parametrize("start, stop", [ + (1, 4), + (np.int8(1), np.int8(4)), + (np.array([1, 1], dtype='u2'), np.array([4, 4], dtype='u2'))]) +def test_non_default_start_stop(function, start, stop, expected): + a = np.array([["--🐍--", "--🦜--"], + ["-🐍---", "-🦜---"]], "T") + indx = function(a, "🐍", start, stop) + assert_array_equal(indx, expected) + + +@pytest.mark.parametrize("count", [2, np.int8(2), np.array([2, 2], 'u2')]) +def test_replace_non_default_repeat(count): + a = np.array(["🐍--", "🦜-🦜-"], "T") + result = np.strings.replace(a, "🦜-", "🦜†", count) + assert_array_equal(result, np.array(["🐍--", "🦜†🦜†"], "T")) + + +def test_strip_ljust_rjust_consistency(string_array, unicode_array): + rjs = np.char.rjust(string_array, 1000) + rju = np.char.rjust(unicode_array, 1000) + + ljs = np.char.ljust(string_array, 1000) + lju = np.char.ljust(unicode_array, 1000) + + assert_array_equal( + np.char.lstrip(rjs), + np.char.lstrip(rju).astype(StringDType()), + ) + + assert_array_equal( + np.char.rstrip(ljs), + np.char.rstrip(lju).astype(StringDType()), + ) + + assert_array_equal( + np.char.strip(ljs), + np.char.strip(lju).astype(StringDType()), + ) + + assert_array_equal( + np.char.strip(rjs), + np.char.strip(rju).astype(StringDType()), + ) + + +def test_unset_na_coercion(): + # a dtype instance with an unset na object is compatible + # with a dtype that has one set + + # this test uses the "add" and "equal" ufunc but all ufuncs that + # accept more than one string argument and produce a string should + # behave this way + # TODO: generalize to more ufuncs + inp = ["hello", "world"] + arr = np.array(inp, dtype=StringDType(na_object=None)) + for op_dtype in [None, StringDType(), StringDType(coerce=False), + StringDType(na_object=None)]: + if op_dtype is None: + op = "2" + else: + op = np.array("2", dtype=op_dtype) + res = arr + op + assert_array_equal(res, ["hello2", "world2"]) + + # dtype instances with distinct explicitly set NA objects are incompatible + for op_dtype in [StringDType(na_object=pd_NA), StringDType(na_object="")]: + op = np.array("2", dtype=op_dtype) + with pytest.raises(TypeError): + arr + op + + # comparisons only consider the na_object + for op_dtype in [None, StringDType(), StringDType(coerce=True), + StringDType(na_object=None)]: + if op_dtype is None: + op = inp + else: + op = np.array(inp, dtype=op_dtype) + assert_array_equal(arr, op) + + for op_dtype in [StringDType(na_object=pd_NA), + StringDType(na_object=np.nan)]: + op = np.array(inp, dtype=op_dtype) + with pytest.raises(TypeError): + arr == op + + +class TestImplementation: + """Check that strings are stored in the arena when possible. + + This tests implementation details, so should be adjusted if + the implementation changes. + """ + + @classmethod + def setup_class(self): + self.MISSING = 0x80 + self.INITIALIZED = 0x40 + self.OUTSIDE_ARENA = 0x20 + self.LONG = 0x10 + self.dtype = StringDType(na_object=np.nan) + self.sizeofstr = self.dtype.itemsize + sp = self.dtype.itemsize // 2 # pointer size = sizeof(size_t) + # Below, size is not strictly correct, since it really uses + # 7 (or 3) bytes, but good enough for the tests here. + self.view_dtype = np.dtype([ + ('offset', f'u{sp}'), + ('size', f'u{sp // 2}'), + ('xsiz', f'V{sp // 2 - 1}'), + ('size_and_flags', 'u1'), + ] if sys.byteorder == 'little' else [ + ('size_and_flags', 'u1'), + ('xsiz', f'V{sp // 2 - 1}'), + ('size', f'u{sp // 2}'), + ('offset', f'u{sp}'), + ]) + self.s_empty = "" + self.s_short = "01234" + self.s_medium = "abcdefghijklmnopqrstuvwxyz" + self.s_long = "-=+" * 100 + self.a = np.array( + [self.s_empty, self.s_short, self.s_medium, self.s_long], + self.dtype) + + def get_view(self, a): + # Cannot view a StringDType as anything else directly, since + # it has references. So, we use a stride trick hack. + from numpy.lib._stride_tricks_impl import DummyArray + interface = dict(a.__array_interface__) + interface['descr'] = self.view_dtype.descr + interface['typestr'] = self.view_dtype.str + return np.asarray(DummyArray(interface, base=a)) + + def get_flags(self, a): + return self.get_view(a)['size_and_flags'] & 0xf0 + + def is_short(self, a): + return self.get_flags(a) == self.INITIALIZED | self.OUTSIDE_ARENA + + def is_on_heap(self, a): + return self.get_flags(a) == (self.INITIALIZED + | self.OUTSIDE_ARENA + | self.LONG) + + def is_missing(self, a): + return self.get_flags(a) & self.MISSING == self.MISSING + + def in_arena(self, a): + return (self.get_flags(a) & (self.INITIALIZED | self.OUTSIDE_ARENA) + == self.INITIALIZED) + + def test_setup(self): + is_short = self.is_short(self.a) + length = np.strings.str_len(self.a) + assert_array_equal(is_short, (length > 0) & (length <= 15)) + assert_array_equal(self.in_arena(self.a), [False, False, True, True]) + assert_array_equal(self.is_on_heap(self.a), False) + assert_array_equal(self.is_missing(self.a), False) + view = self.get_view(self.a) + sizes = np.where(is_short, view['size_and_flags'] & 0xf, + view['size']) + assert_array_equal(sizes, np.strings.str_len(self.a)) + assert_array_equal(view['xsiz'][2:], + np.void(b'\x00' * (self.sizeofstr // 4 - 1))) + # Check that the medium string uses only 1 byte for its length + # in the arena, while the long string takes 8 (or 4). + offsets = view['offset'] + assert offsets[2] == 1 + assert offsets[3] == 1 + len(self.s_medium) + self.sizeofstr // 2 + + def test_empty(self): + e = np.empty((3,), self.dtype) + assert_array_equal(self.get_flags(e), 0) + assert_array_equal(e, "") + + def test_zeros(self): + z = np.zeros((2,), self.dtype) + assert_array_equal(self.get_flags(z), 0) + assert_array_equal(z, "") + + def test_copy(self): + c = self.a.copy() + assert_array_equal(self.get_flags(c), self.get_flags(self.a)) + assert_array_equal(c, self.a) + offsets = self.get_view(c)['offset'] + assert offsets[2] == 1 + assert offsets[3] == 1 + len(self.s_medium) + self.sizeofstr // 2 + + def test_arena_use_with_setting(self): + c = np.zeros_like(self.a) + assert_array_equal(self.get_flags(c), 0) + c[:] = self.a + assert_array_equal(self.get_flags(c), self.get_flags(self.a)) + assert_array_equal(c, self.a) + + def test_arena_reuse_with_setting(self): + c = self.a.copy() + c[:] = self.a + assert_array_equal(self.get_flags(c), self.get_flags(self.a)) + assert_array_equal(c, self.a) + + def test_arena_reuse_after_missing(self): + c = self.a.copy() + c[:] = np.nan + assert np.all(self.is_missing(c)) + # Replacing with the original strings, the arena should be reused. + c[:] = self.a + assert_array_equal(self.get_flags(c), self.get_flags(self.a)) + assert_array_equal(c, self.a) + + def test_arena_reuse_after_empty(self): + c = self.a.copy() + c[:] = "" + assert_array_equal(c, "") + # Replacing with the original strings, the arena should be reused. + c[:] = self.a + assert_array_equal(self.get_flags(c), self.get_flags(self.a)) + assert_array_equal(c, self.a) + + def test_arena_reuse_for_shorter(self): + c = self.a.copy() + # A string slightly shorter than the shortest in the arena + # should be used for all strings in the arena. + c[:] = self.s_medium[:-1] + assert_array_equal(c, self.s_medium[:-1]) + # first empty string in original was never initialized, so + # filling it in now leaves it initialized inside the arena. + # second string started as a short string so it can never live + # in the arena. + in_arena = np.array([True, False, True, True]) + assert_array_equal(self.in_arena(c), in_arena) + # But when a short string is replaced, it will go on the heap. + assert_array_equal(self.is_short(c), False) + assert_array_equal(self.is_on_heap(c), ~in_arena) + # We can put the originals back, and they'll still fit, + # and short strings are back as short strings + c[:] = self.a + assert_array_equal(c, self.a) + assert_array_equal(self.in_arena(c), in_arena) + assert_array_equal(self.is_short(c), self.is_short(self.a)) + assert_array_equal(self.is_on_heap(c), False) + + def test_arena_reuse_if_possible(self): + c = self.a.copy() + # A slightly longer string will not fit in the arena for + # the medium string, but will fit for the longer one. + c[:] = self.s_medium + "±" + assert_array_equal(c, self.s_medium + "±") + in_arena_exp = np.strings.str_len(self.a) >= len(self.s_medium) + 1 + # first entry started uninitialized and empty, so filling it leaves + # it in the arena + in_arena_exp[0] = True + assert not np.all(in_arena_exp == self.in_arena(self.a)) + assert_array_equal(self.in_arena(c), in_arena_exp) + assert_array_equal(self.is_short(c), False) + assert_array_equal(self.is_on_heap(c), ~in_arena_exp) + # And once outside arena, it stays outside, since offset is lost. + # But short strings are used again. + c[:] = self.a + is_short_exp = self.is_short(self.a) + assert_array_equal(c, self.a) + assert_array_equal(self.in_arena(c), in_arena_exp) + assert_array_equal(self.is_short(c), is_short_exp) + assert_array_equal(self.is_on_heap(c), ~in_arena_exp & ~is_short_exp) + + def test_arena_no_reuse_after_short(self): + c = self.a.copy() + # If we replace a string with a short string, it cannot + # go into the arena after because the offset is lost. + c[:] = self.s_short + assert_array_equal(c, self.s_short) + assert_array_equal(self.in_arena(c), False) + c[:] = self.a + assert_array_equal(c, self.a) + assert_array_equal(self.in_arena(c), False) + assert_array_equal(self.is_on_heap(c), self.in_arena(self.a)) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_strings.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_strings.py new file mode 100644 index 0000000000000000000000000000000000000000..2c3baea58a3ac7fa068fd18f8e012917ef9c8f1c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_strings.py @@ -0,0 +1,926 @@ +import sys +import pytest + +import operator +import numpy as np + +from numpy.testing import assert_array_equal, assert_raises, IS_PYPY + + +COMPARISONS = [ + (operator.eq, np.equal, "=="), + (operator.ne, np.not_equal, "!="), + (operator.lt, np.less, "<"), + (operator.le, np.less_equal, "<="), + (operator.gt, np.greater, ">"), + (operator.ge, np.greater_equal, ">="), +] + +MAX = np.iinfo(np.int64).max + +IS_PYPY_LT_7_3_16 = IS_PYPY and sys.implementation.version < (7, 3, 16) + +@pytest.mark.parametrize(["op", "ufunc", "sym"], COMPARISONS) +def test_mixed_string_comparison_ufuncs_fail(op, ufunc, sym): + arr_string = np.array(["a", "b"], dtype="S") + arr_unicode = np.array(["a", "c"], dtype="U") + + with pytest.raises(TypeError, match="did not contain a loop"): + ufunc(arr_string, arr_unicode) + + with pytest.raises(TypeError, match="did not contain a loop"): + ufunc(arr_unicode, arr_string) + +@pytest.mark.parametrize(["op", "ufunc", "sym"], COMPARISONS) +def test_mixed_string_comparisons_ufuncs_with_cast(op, ufunc, sym): + arr_string = np.array(["a", "b"], dtype="S") + arr_unicode = np.array(["a", "c"], dtype="U") + + # While there is no loop, manual casting is acceptable: + res1 = ufunc(arr_string, arr_unicode, signature="UU->?", casting="unsafe") + res2 = ufunc(arr_string, arr_unicode, signature="SS->?", casting="unsafe") + + expected = op(arr_string.astype("U"), arr_unicode) + assert_array_equal(res1, expected) + assert_array_equal(res2, expected) + + +@pytest.mark.parametrize(["op", "ufunc", "sym"], COMPARISONS) +@pytest.mark.parametrize("dtypes", [ + ("S2", "S2"), ("S2", "S10"), + ("U1"), (">U1", ">U1"), + ("U10")]) +@pytest.mark.parametrize("aligned", [True, False]) +def test_string_comparisons(op, ufunc, sym, dtypes, aligned): + # ensure native byte-order for the first view to stay within unicode range + native_dt = np.dtype(dtypes[0]).newbyteorder("=") + arr = np.arange(2**15).view(native_dt).astype(dtypes[0]) + if not aligned: + # Make `arr` unaligned: + new = np.zeros(arr.nbytes + 1, dtype=np.uint8)[1:].view(dtypes[0]) + new[...] = arr + arr = new + + arr2 = arr.astype(dtypes[1], copy=True) + np.random.shuffle(arr2) + arr[0] = arr2[0] # make sure one matches + + expected = [op(d1, d2) for d1, d2 in zip(arr.tolist(), arr2.tolist())] + assert_array_equal(op(arr, arr2), expected) + assert_array_equal(ufunc(arr, arr2), expected) + assert_array_equal( + np.char.compare_chararrays(arr, arr2, sym, False), expected + ) + + expected = [op(d2, d1) for d1, d2 in zip(arr.tolist(), arr2.tolist())] + assert_array_equal(op(arr2, arr), expected) + assert_array_equal(ufunc(arr2, arr), expected) + assert_array_equal( + np.char.compare_chararrays(arr2, arr, sym, False), expected + ) + + +@pytest.mark.parametrize(["op", "ufunc", "sym"], COMPARISONS) +@pytest.mark.parametrize("dtypes", [ + ("S2", "S2"), ("S2", "S10"), ("U10")]) +def test_string_comparisons_empty(op, ufunc, sym, dtypes): + arr = np.empty((1, 0, 1, 5), dtype=dtypes[0]) + arr2 = np.empty((100, 1, 0, 1), dtype=dtypes[1]) + + expected = np.empty(np.broadcast_shapes(arr.shape, arr2.shape), dtype=bool) + assert_array_equal(op(arr, arr2), expected) + assert_array_equal(ufunc(arr, arr2), expected) + assert_array_equal( + np.char.compare_chararrays(arr, arr2, sym, False), expected + ) + + +@pytest.mark.parametrize("str_dt", ["S", "U"]) +@pytest.mark.parametrize("float_dt", np.typecodes["AllFloat"]) +def test_float_to_string_cast(str_dt, float_dt): + float_dt = np.dtype(float_dt) + fi = np.finfo(float_dt) + arr = np.array([np.nan, np.inf, -np.inf, fi.max, fi.min], dtype=float_dt) + expected = ["nan", "inf", "-inf", str(fi.max), str(fi.min)] + if float_dt.kind == "c": + expected = [f"({r}+0j)" for r in expected] + + res = arr.astype(str_dt) + assert_array_equal(res, np.array(expected, dtype=str_dt)) + + +@pytest.mark.parametrize("dt", ["S", "U", "T"]) +class TestMethods: + + @pytest.mark.parametrize("in1,in2,out", [ + ("", "", ""), + ("abc", "abc", "abcabc"), + ("12345", "12345", "1234512345"), + ("MixedCase", "MixedCase", "MixedCaseMixedCase"), + ("12345 \0 ", "12345 \0 ", "12345 \0 12345 \0 "), + ("UPPER", "UPPER", "UPPERUPPER"), + (["abc", "def"], ["hello", "world"], ["abchello", "defworld"]), + ]) + def test_add(self, in1, in2, out, dt): + in1 = np.array(in1, dtype=dt) + in2 = np.array(in2, dtype=dt) + out = np.array(out, dtype=dt) + assert_array_equal(np.strings.add(in1, in2), out) + + @pytest.mark.parametrize("in1,in2,out", [ + ("abc", 3, "abcabcabc"), + ("abc", 0, ""), + ("abc", -1, ""), + (["abc", "def"], [1, 4], ["abc", "defdefdefdef"]), + ]) + def test_multiply(self, in1, in2, out, dt): + in1 = np.array(in1, dtype=dt) + out = np.array(out, dtype=dt) + assert_array_equal(np.strings.multiply(in1, in2), out) + + def test_multiply_raises(self, dt): + with pytest.raises(TypeError, match="unsupported type"): + np.strings.multiply(np.array("abc", dtype=dt), 3.14) + + with pytest.raises(MemoryError): + np.strings.multiply(np.array("abc", dtype=dt), sys.maxsize) + + @pytest.mark.parametrize("i_dt", [np.int8, np.int16, np.int32, + np.int64, np.int_]) + def test_multiply_integer_dtypes(self, i_dt, dt): + a = np.array("abc", dtype=dt) + i = np.array(3, dtype=i_dt) + res = np.array("abcabcabc", dtype=dt) + assert_array_equal(np.strings.multiply(a, i), res) + + @pytest.mark.parametrize("in_,out", [ + ("", False), + ("a", True), + ("A", True), + ("\n", False), + ("abc", True), + ("aBc123", False), + ("abc\n", False), + (["abc", "aBc123"], [True, False]), + ]) + def test_isalpha(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.isalpha(in_), out) + + @pytest.mark.parametrize("in_,out", [ + ('', False), + ('a', True), + ('A', True), + ('\n', False), + ('123abc456', True), + ('a1b3c', True), + ('aBc000 ', False), + ('abc\n', False), + ]) + def test_isalnum(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.isalnum(in_), out) + + @pytest.mark.parametrize("in_,out", [ + ("", False), + ("a", False), + ("0", True), + ("012345", True), + ("012345a", False), + (["a", "012345"], [False, True]), + ]) + def test_isdigit(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.isdigit(in_), out) + + @pytest.mark.parametrize("in_,out", [ + ("", False), + ("a", False), + ("1", False), + (" ", True), + ("\t", True), + ("\r", True), + ("\n", True), + (" \t\r \n", True), + (" \t\r\na", False), + (["\t1", " \t\r \n"], [False, True]) + ]) + def test_isspace(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.isspace(in_), out) + + @pytest.mark.parametrize("in_,out", [ + ('', False), + ('a', True), + ('A', False), + ('\n', False), + ('abc', True), + ('aBc', False), + ('abc\n', True), + ]) + def test_islower(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.islower(in_), out) + + @pytest.mark.parametrize("in_,out", [ + ('', False), + ('a', False), + ('A', True), + ('\n', False), + ('ABC', True), + ('AbC', False), + ('ABC\n', True), + ]) + def test_isupper(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.isupper(in_), out) + + @pytest.mark.parametrize("in_,out", [ + ('', False), + ('a', False), + ('A', True), + ('\n', False), + ('A Titlecased Line', True), + ('A\nTitlecased Line', True), + ('A Titlecased, Line', True), + ('Not a capitalized String', False), + ('Not\ta Titlecase String', False), + ('Not--a Titlecase String', False), + ('NOT', False), + ]) + def test_istitle(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.istitle(in_), out) + + @pytest.mark.parametrize("in_,out", [ + ("", 0), + ("abc", 3), + ("12345", 5), + ("MixedCase", 9), + ("12345 \x00 ", 8), + ("UPPER", 5), + (["abc", "12345 \x00 "], [3, 8]), + ]) + def test_str_len(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.str_len(in_), out) + + @pytest.mark.parametrize("a,sub,start,end,out", [ + ("abcdefghiabc", "abc", 0, None, 0), + ("abcdefghiabc", "abc", 1, None, 9), + ("abcdefghiabc", "def", 4, None, -1), + ("abc", "", 0, None, 0), + ("abc", "", 3, None, 3), + ("abc", "", 4, None, -1), + ("rrarrrrrrrrra", "a", 0, None, 2), + ("rrarrrrrrrrra", "a", 4, None, 12), + ("rrarrrrrrrrra", "a", 4, 6, -1), + ("", "", 0, None, 0), + ("", "", 1, 1, -1), + ("", "", MAX, 0, -1), + ("", "xx", 0, None, -1), + ("", "xx", 1, 1, -1), + ("", "xx", MAX, 0, -1), + pytest.param(99*"a" + "b", "b", 0, None, 99, + id="99*a+b-b-0-None-99"), + pytest.param(98*"a" + "ba", "ba", 0, None, 98, + id="98*a+ba-ba-0-None-98"), + pytest.param(100*"a", "b", 0, None, -1, + id="100*a-b-0-None--1"), + pytest.param(30000*"a" + 100*"b", 100*"b", 0, None, 30000, + id="30000*a+100*b-100*b-0-None-30000"), + pytest.param(30000*"a", 100*"b", 0, None, -1, + id="30000*a-100*b-0-None--1"), + pytest.param(15000*"a" + 15000*"b", 15000*"b", 0, None, 15000, + id="15000*a+15000*b-15000*b-0-None-15000"), + pytest.param(15000*"a" + 15000*"b", 15000*"c", 0, None, -1, + id="15000*a+15000*b-15000*c-0-None--1"), + (["abcdefghiabc", "rrarrrrrrrrra"], ["def", "arr"], [0, 3], + None, [3, -1]), + ("Ae¢☃€ 😊" * 2, "😊", 0, None, 6), + ("Ae¢☃€ 😊" * 2, "😊", 7, None, 13), + ]) + def test_find(self, a, sub, start, end, out, dt): + if "😊" in a and dt == "S": + pytest.skip("Bytes dtype does not support non-ascii input") + a = np.array(a, dtype=dt) + sub = np.array(sub, dtype=dt) + assert_array_equal(np.strings.find(a, sub, start, end), out) + + @pytest.mark.parametrize("a,sub,start,end,out", [ + ("abcdefghiabc", "abc", 0, None, 9), + ("abcdefghiabc", "", 0, None, 12), + ("abcdefghiabc", "abcd", 0, None, 0), + ("abcdefghiabc", "abcz", 0, None, -1), + ("abc", "", 0, None, 3), + ("abc", "", 3, None, 3), + ("abc", "", 4, None, -1), + ("rrarrrrrrrrra", "a", 0, None, 12), + ("rrarrrrrrrrra", "a", 4, None, 12), + ("rrarrrrrrrrra", "a", 4, 6, -1), + (["abcdefghiabc", "rrarrrrrrrrra"], ["abc", "a"], [0, 0], + None, [9, 12]), + ("Ae¢☃€ 😊" * 2, "😊", 0, None, 13), + ("Ae¢☃€ 😊" * 2, "😊", 0, 7, 6), + ]) + def test_rfind(self, a, sub, start, end, out, dt): + if "😊" in a and dt == "S": + pytest.skip("Bytes dtype does not support non-ascii input") + a = np.array(a, dtype=dt) + sub = np.array(sub, dtype=dt) + assert_array_equal(np.strings.rfind(a, sub, start, end), out) + + @pytest.mark.parametrize("a,sub,start,end,out", [ + ("aaa", "a", 0, None, 3), + ("aaa", "b", 0, None, 0), + ("aaa", "a", 1, None, 2), + ("aaa", "a", 10, None, 0), + ("aaa", "a", -1, None, 1), + ("aaa", "a", -10, None, 3), + ("aaa", "a", 0, 1, 1), + ("aaa", "a", 0, 10, 3), + ("aaa", "a", 0, -1, 2), + ("aaa", "a", 0, -10, 0), + ("aaa", "", 1, None, 3), + ("aaa", "", 3, None, 1), + ("aaa", "", 10, None, 0), + ("aaa", "", -1, None, 2), + ("aaa", "", -10, None, 4), + ("aaa", "aaaa", 0, None, 0), + pytest.param(98*"a" + "ba", "ba", 0, None, 1, + id="98*a+ba-ba-0-None-1"), + pytest.param(30000*"a" + 100*"b", 100*"b", 0, None, 1, + id="30000*a+100*b-100*b-0-None-1"), + pytest.param(30000*"a", 100*"b", 0, None, 0, + id="30000*a-100*b-0-None-0"), + pytest.param(30000*"a" + 100*"ab", "ab", 0, None, 100, + id="30000*a+100*ab-ab-0-None-100"), + pytest.param(15000*"a" + 15000*"b", 15000*"b", 0, None, 1, + id="15000*a+15000*b-15000*b-0-None-1"), + pytest.param(15000*"a" + 15000*"b", 15000*"c", 0, None, 0, + id="15000*a+15000*b-15000*c-0-None-0"), + ("", "", 0, None, 1), + ("", "", 1, 1, 0), + ("", "", MAX, 0, 0), + ("", "xx", 0, None, 0), + ("", "xx", 1, 1, 0), + ("", "xx", MAX, 0, 0), + (["aaa", ""], ["a", ""], [0, 0], None, [3, 1]), + ("Ae¢☃€ 😊" * 100, "😊", 0, None, 100), + ]) + def test_count(self, a, sub, start, end, out, dt): + if "😊" in a and dt == "S": + pytest.skip("Bytes dtype does not support non-ascii input") + a = np.array(a, dtype=dt) + sub = np.array(sub, dtype=dt) + assert_array_equal(np.strings.count(a, sub, start, end), out) + + @pytest.mark.parametrize("a,prefix,start,end,out", [ + ("hello", "he", 0, None, True), + ("hello", "hello", 0, None, True), + ("hello", "hello world", 0, None, False), + ("hello", "", 0, None, True), + ("hello", "ello", 0, None, False), + ("hello", "ello", 1, None, True), + ("hello", "o", 4, None, True), + ("hello", "o", 5, None, False), + ("hello", "", 5, None, True), + ("hello", "lo", 6, None, False), + ("helloworld", "lowo", 3, None, True), + ("helloworld", "lowo", 3, 7, True), + ("helloworld", "lowo", 3, 6, False), + ("", "", 0, 1, True), + ("", "", 0, 0, True), + ("", "", 1, 0, False), + ("hello", "he", 0, -1, True), + ("hello", "he", -53, -1, True), + ("hello", "hello", 0, -1, False), + ("hello", "hello world", -1, -10, False), + ("hello", "ello", -5, None, False), + ("hello", "ello", -4, None, True), + ("hello", "o", -2, None, False), + ("hello", "o", -1, None, True), + ("hello", "", -3, -3, True), + ("hello", "lo", -9, None, False), + (["hello", ""], ["he", ""], [0, 0], None, [True, True]), + ]) + def test_startswith(self, a, prefix, start, end, out, dt): + a = np.array(a, dtype=dt) + prefix = np.array(prefix, dtype=dt) + assert_array_equal(np.strings.startswith(a, prefix, start, end), out) + + @pytest.mark.parametrize("a,suffix,start,end,out", [ + ("hello", "lo", 0, None, True), + ("hello", "he", 0, None, False), + ("hello", "", 0, None, True), + ("hello", "hello world", 0, None, False), + ("helloworld", "worl", 0, None, False), + ("helloworld", "worl", 3, 9, True), + ("helloworld", "world", 3, 12, True), + ("helloworld", "lowo", 1, 7, True), + ("helloworld", "lowo", 2, 7, True), + ("helloworld", "lowo", 3, 7, True), + ("helloworld", "lowo", 4, 7, False), + ("helloworld", "lowo", 3, 8, False), + ("ab", "ab", 0, 1, False), + ("ab", "ab", 0, 0, False), + ("", "", 0, 1, True), + ("", "", 0, 0, True), + ("", "", 1, 0, False), + ("hello", "lo", -2, None, True), + ("hello", "he", -2, None, False), + ("hello", "", -3, -3, True), + ("hello", "hello world", -10, -2, False), + ("helloworld", "worl", -6, None, False), + ("helloworld", "worl", -5, -1, True), + ("helloworld", "worl", -5, 9, True), + ("helloworld", "world", -7, 12, True), + ("helloworld", "lowo", -99, -3, True), + ("helloworld", "lowo", -8, -3, True), + ("helloworld", "lowo", -7, -3, True), + ("helloworld", "lowo", 3, -4, False), + ("helloworld", "lowo", -8, -2, False), + (["hello", "helloworld"], ["lo", "worl"], [0, -6], None, + [True, False]), + ]) + def test_endswith(self, a, suffix, start, end, out, dt): + a = np.array(a, dtype=dt) + suffix = np.array(suffix, dtype=dt) + assert_array_equal(np.strings.endswith(a, suffix, start, end), out) + + @pytest.mark.parametrize("a,chars,out", [ + ("", None, ""), + (" hello ", None, "hello "), + ("hello", None, "hello"), + (" \t\n\r\f\vabc \t\n\r\f\v", None, "abc \t\n\r\f\v"), + ([" hello ", "hello"], None, ["hello ", "hello"]), + ("", "", ""), + ("", "xyz", ""), + ("hello", "", "hello"), + ("xyzzyhelloxyzzy", "xyz", "helloxyzzy"), + ("hello", "xyz", "hello"), + ("xyxz", "xyxz", ""), + ("xyxzx", "x", "yxzx"), + (["xyzzyhelloxyzzy", "hello"], ["xyz", "xyz"], + ["helloxyzzy", "hello"]), + (["ba", "ac", "baa", "bba"], "b", ["a", "ac", "aa", "a"]), + ]) + def test_lstrip(self, a, chars, out, dt): + a = np.array(a, dtype=dt) + out = np.array(out, dtype=dt) + if chars is not None: + chars = np.array(chars, dtype=dt) + assert_array_equal(np.strings.lstrip(a, chars), out) + else: + assert_array_equal(np.strings.lstrip(a), out) + + @pytest.mark.parametrize("a,chars,out", [ + ("", None, ""), + (" hello ", None, " hello"), + ("hello", None, "hello"), + (" \t\n\r\f\vabc \t\n\r\f\v", None, " \t\n\r\f\vabc"), + ([" hello ", "hello"], None, [" hello", "hello"]), + ("", "", ""), + ("", "xyz", ""), + ("hello", "", "hello"), + (["hello ", "abcdefghijklmnop"], None, + ["hello", "abcdefghijklmnop"]), + ("xyzzyhelloxyzzy", "xyz", "xyzzyhello"), + ("hello", "xyz", "hello"), + ("xyxz", "xyxz", ""), + (" ", None, ""), + ("xyxzx", "x", "xyxz"), + (["xyzzyhelloxyzzy", "hello"], ["xyz", "xyz"], + ["xyzzyhello", "hello"]), + (["ab", "ac", "aab", "abb"], "b", ["a", "ac", "aa", "a"]), + ]) + def test_rstrip(self, a, chars, out, dt): + a = np.array(a, dtype=dt) + out = np.array(out, dtype=dt) + if chars is not None: + chars = np.array(chars, dtype=dt) + assert_array_equal(np.strings.rstrip(a, chars), out) + else: + assert_array_equal(np.strings.rstrip(a), out) + + @pytest.mark.parametrize("a,chars,out", [ + ("", None, ""), + (" hello ", None, "hello"), + ("hello", None, "hello"), + (" \t\n\r\f\vabc \t\n\r\f\v", None, "abc"), + ([" hello ", "hello"], None, ["hello", "hello"]), + ("", "", ""), + ("", "xyz", ""), + ("hello", "", "hello"), + ("xyzzyhelloxyzzy", "xyz", "hello"), + ("hello", "xyz", "hello"), + ("xyxz", "xyxz", ""), + ("xyxzx", "x", "yxz"), + (["xyzzyhelloxyzzy", "hello"], ["xyz", "xyz"], + ["hello", "hello"]), + (["bab", "ac", "baab", "bbabb"], "b", ["a", "ac", "aa", "a"]), + ]) + def test_strip(self, a, chars, out, dt): + a = np.array(a, dtype=dt) + if chars is not None: + chars = np.array(chars, dtype=dt) + out = np.array(out, dtype=dt) + assert_array_equal(np.strings.strip(a, chars), out) + + @pytest.mark.parametrize("buf,old,new,count,res", [ + ("", "", "", -1, ""), + ("", "", "A", -1, "A"), + ("", "A", "", -1, ""), + ("", "A", "A", -1, ""), + ("", "", "", 100, ""), + ("", "", "A", 100, "A"), + ("A", "", "", -1, "A"), + ("A", "", "*", -1, "*A*"), + ("A", "", "*1", -1, "*1A*1"), + ("A", "", "*-#", -1, "*-#A*-#"), + ("AA", "", "*-", -1, "*-A*-A*-"), + ("AA", "", "*-", -1, "*-A*-A*-"), + ("AA", "", "*-", 4, "*-A*-A*-"), + ("AA", "", "*-", 3, "*-A*-A*-"), + ("AA", "", "*-", 2, "*-A*-A"), + ("AA", "", "*-", 1, "*-AA"), + ("AA", "", "*-", 0, "AA"), + ("A", "A", "", -1, ""), + ("AAA", "A", "", -1, ""), + ("AAA", "A", "", -1, ""), + ("AAA", "A", "", 4, ""), + ("AAA", "A", "", 3, ""), + ("AAA", "A", "", 2, "A"), + ("AAA", "A", "", 1, "AA"), + ("AAA", "A", "", 0, "AAA"), + ("AAAAAAAAAA", "A", "", -1, ""), + ("ABACADA", "A", "", -1, "BCD"), + ("ABACADA", "A", "", -1, "BCD"), + ("ABACADA", "A", "", 5, "BCD"), + ("ABACADA", "A", "", 4, "BCD"), + ("ABACADA", "A", "", 3, "BCDA"), + ("ABACADA", "A", "", 2, "BCADA"), + ("ABACADA", "A", "", 1, "BACADA"), + ("ABACADA", "A", "", 0, "ABACADA"), + ("ABCAD", "A", "", -1, "BCD"), + ("ABCADAA", "A", "", -1, "BCD"), + ("BCD", "A", "", -1, "BCD"), + ("*************", "A", "", -1, "*************"), + ("^"+"A"*1000+"^", "A", "", 999, "^A^"), + ("the", "the", "", -1, ""), + ("theater", "the", "", -1, "ater"), + ("thethe", "the", "", -1, ""), + ("thethethethe", "the", "", -1, ""), + ("theatheatheathea", "the", "", -1, "aaaa"), + ("that", "the", "", -1, "that"), + ("thaet", "the", "", -1, "thaet"), + ("here and there", "the", "", -1, "here and re"), + ("here and there and there", "the", "", -1, "here and re and re"), + ("here and there and there", "the", "", 3, "here and re and re"), + ("here and there and there", "the", "", 2, "here and re and re"), + ("here and there and there", "the", "", 1, "here and re and there"), + ("here and there and there", "the", "", 0, "here and there and there"), + ("here and there and there", "the", "", -1, "here and re and re"), + ("abc", "the", "", -1, "abc"), + ("abcdefg", "the", "", -1, "abcdefg"), + ("bbobob", "bob", "", -1, "bob"), + ("bbobobXbbobob", "bob", "", -1, "bobXbob"), + ("aaaaaaabob", "bob", "", -1, "aaaaaaa"), + ("aaaaaaa", "bob", "", -1, "aaaaaaa"), + ("Who goes there?", "o", "o", -1, "Who goes there?"), + ("Who goes there?", "o", "O", -1, "WhO gOes there?"), + ("Who goes there?", "o", "O", -1, "WhO gOes there?"), + ("Who goes there?", "o", "O", 3, "WhO gOes there?"), + ("Who goes there?", "o", "O", 2, "WhO gOes there?"), + ("Who goes there?", "o", "O", 1, "WhO goes there?"), + ("Who goes there?", "o", "O", 0, "Who goes there?"), + ("Who goes there?", "a", "q", -1, "Who goes there?"), + ("Who goes there?", "W", "w", -1, "who goes there?"), + ("WWho goes there?WW", "W", "w", -1, "wwho goes there?ww"), + ("Who goes there?", "?", "!", -1, "Who goes there!"), + ("Who goes there??", "?", "!", -1, "Who goes there!!"), + ("Who goes there?", ".", "!", -1, "Who goes there?"), + ("This is a tissue", "is", "**", -1, "Th** ** a t**sue"), + ("This is a tissue", "is", "**", -1, "Th** ** a t**sue"), + ("This is a tissue", "is", "**", 4, "Th** ** a t**sue"), + ("This is a tissue", "is", "**", 3, "Th** ** a t**sue"), + ("This is a tissue", "is", "**", 2, "Th** ** a tissue"), + ("This is a tissue", "is", "**", 1, "Th** is a tissue"), + ("This is a tissue", "is", "**", 0, "This is a tissue"), + ("bobob", "bob", "cob", -1, "cobob"), + ("bobobXbobobob", "bob", "cob", -1, "cobobXcobocob"), + ("bobob", "bot", "bot", -1, "bobob"), + ("Reykjavik", "k", "KK", -1, "ReyKKjaviKK"), + ("Reykjavik", "k", "KK", -1, "ReyKKjaviKK"), + ("Reykjavik", "k", "KK", 2, "ReyKKjaviKK"), + ("Reykjavik", "k", "KK", 1, "ReyKKjavik"), + ("Reykjavik", "k", "KK", 0, "Reykjavik"), + ("A.B.C.", ".", "----", -1, "A----B----C----"), + ("Reykjavik", "q", "KK", -1, "Reykjavik"), + ("spam, spam, eggs and spam", "spam", "ham", -1, + "ham, ham, eggs and ham"), + ("spam, spam, eggs and spam", "spam", "ham", -1, + "ham, ham, eggs and ham"), + ("spam, spam, eggs and spam", "spam", "ham", 4, + "ham, ham, eggs and ham"), + ("spam, spam, eggs and spam", "spam", "ham", 3, + "ham, ham, eggs and ham"), + ("spam, spam, eggs and spam", "spam", "ham", 2, + "ham, ham, eggs and spam"), + ("spam, spam, eggs and spam", "spam", "ham", 1, + "ham, spam, eggs and spam"), + ("spam, spam, eggs and spam", "spam", "ham", 0, + "spam, spam, eggs and spam"), + ("bobobob", "bobob", "bob", -1, "bobob"), + ("bobobobXbobobob", "bobob", "bob", -1, "bobobXbobob"), + ("BOBOBOB", "bob", "bobby", -1, "BOBOBOB"), + ("one!two!three!", "!", "@", 1, "one@two!three!"), + ("one!two!three!", "!", "", -1, "onetwothree"), + ("one!two!three!", "!", "@", 2, "one@two@three!"), + ("one!two!three!", "!", "@", 3, "one@two@three@"), + ("one!two!three!", "!", "@", 4, "one@two@three@"), + ("one!two!three!", "!", "@", 0, "one!two!three!"), + ("one!two!three!", "!", "@", -1, "one@two@three@"), + ("one!two!three!", "x", "@", -1, "one!two!three!"), + ("one!two!three!", "x", "@", 2, "one!two!three!"), + ("abc", "", "-", -1, "-a-b-c-"), + ("abc", "", "-", 3, "-a-b-c"), + ("abc", "", "-", 0, "abc"), + ("abc", "ab", "--", 0, "abc"), + ("abc", "xy", "--", -1, "abc"), + (["abbc", "abbd"], "b", "z", [1, 2], ["azbc", "azzd"]), + ]) + def test_replace(self, buf, old, new, count, res, dt): + if "😊" in buf and dt == "S": + pytest.skip("Bytes dtype does not support non-ascii input") + buf = np.array(buf, dtype=dt) + old = np.array(old, dtype=dt) + new = np.array(new, dtype=dt) + res = np.array(res, dtype=dt) + assert_array_equal(np.strings.replace(buf, old, new, count), res) + + @pytest.mark.parametrize("buf,sub,start,end,res", [ + ("abcdefghiabc", "", 0, None, 0), + ("abcdefghiabc", "def", 0, None, 3), + ("abcdefghiabc", "abc", 0, None, 0), + ("abcdefghiabc", "abc", 1, None, 9), + ]) + def test_index(self, buf, sub, start, end, res, dt): + buf = np.array(buf, dtype=dt) + sub = np.array(sub, dtype=dt) + assert_array_equal(np.strings.index(buf, sub, start, end), res) + + @pytest.mark.parametrize("buf,sub,start,end", [ + ("abcdefghiabc", "hib", 0, None), + ("abcdefghiab", "abc", 1, None), + ("abcdefghi", "ghi", 8, None), + ("abcdefghi", "ghi", -1, None), + ("rrarrrrrrrrra", "a", 4, 6), + ]) + def test_index_raises(self, buf, sub, start, end, dt): + buf = np.array(buf, dtype=dt) + sub = np.array(sub, dtype=dt) + with pytest.raises(ValueError, match="substring not found"): + np.strings.index(buf, sub, start, end) + + @pytest.mark.parametrize("buf,sub,start,end,res", [ + ("abcdefghiabc", "", 0, None, 12), + ("abcdefghiabc", "def", 0, None, 3), + ("abcdefghiabc", "abc", 0, None, 9), + ("abcdefghiabc", "abc", 0, -1, 0), + ]) + def test_rindex(self, buf, sub, start, end, res, dt): + buf = np.array(buf, dtype=dt) + sub = np.array(sub, dtype=dt) + assert_array_equal(np.strings.rindex(buf, sub, start, end), res) + + @pytest.mark.parametrize("buf,sub,start,end", [ + ("abcdefghiabc", "hib", 0, None), + ("defghiabc", "def", 1, None), + ("defghiabc", "abc", 0, -1), + ("abcdefghi", "ghi", 0, 8), + ("abcdefghi", "ghi", 0, -1), + ("rrarrrrrrrrra", "a", 4, 6), + ]) + def test_rindex_raises(self, buf, sub, start, end, dt): + buf = np.array(buf, dtype=dt) + sub = np.array(sub, dtype=dt) + with pytest.raises(ValueError, match="substring not found"): + np.strings.rindex(buf, sub, start, end) + + @pytest.mark.parametrize("buf,tabsize,res", [ + ("abc\rab\tdef\ng\thi", 8, "abc\rab def\ng hi"), + ("abc\rab\tdef\ng\thi", 4, "abc\rab def\ng hi"), + ("abc\r\nab\tdef\ng\thi", 8, "abc\r\nab def\ng hi"), + ("abc\r\nab\tdef\ng\thi", 4, "abc\r\nab def\ng hi"), + ("abc\r\nab\r\ndef\ng\r\nhi", 4, "abc\r\nab\r\ndef\ng\r\nhi"), + (" \ta\n\tb", 1, " a\n b"), + ]) + def test_expandtabs(self, buf, tabsize, res, dt): + buf = np.array(buf, dtype=dt) + res = np.array(res, dtype=dt) + assert_array_equal(np.strings.expandtabs(buf, tabsize), res) + + def test_expandtabs_raises_overflow(self, dt): + with pytest.raises(OverflowError, match="new string is too long"): + np.strings.expandtabs(np.array("\ta\n\tb", dtype=dt), sys.maxsize) + np.strings.expandtabs(np.array("\ta\n\tb", dtype=dt), 2**61) + + +@pytest.mark.parametrize("dt", ["U", "T"]) +class TestMethodsWithUnicode: + @pytest.mark.parametrize("in_,out", [ + ("", False), + ("a", False), + ("0", True), + ("\u2460", False), # CIRCLED DIGIT 1 + ("\xbc", False), # VULGAR FRACTION ONE QUARTER + ("\u0660", True), # ARABIC_INDIC DIGIT ZERO + ("012345", True), + ("012345a", False), + (["0", "a"], [True, False]), + ]) + def test_isdecimal_unicode(self, in_, out, dt): + buf = np.array(in_, dtype=dt) + assert_array_equal(np.strings.isdecimal(buf), out) + + @pytest.mark.parametrize("in_,out", [ + ("", False), + ("a", False), + ("0", True), + ("\u2460", True), # CIRCLED DIGIT 1 + ("\xbc", True), # VULGAR FRACTION ONE QUARTER + ("\u0660", True), # ARABIC_INDIC DIGIT ZERO + ("012345", True), + ("012345a", False), + (["0", "a"], [True, False]), + ]) + def test_isnumeric_unicode(self, in_, out, dt): + buf = np.array(in_, dtype=dt) + assert_array_equal(np.strings.isnumeric(buf), out) + + @pytest.mark.parametrize("buf,old,new,count,res", [ + ("...\u043c......<", "<", "<", -1, "...\u043c......<"), + ("Ae¢☃€ 😊" * 2, "A", "B", -1, "Be¢☃€ 😊Be¢☃€ 😊"), + ("Ae¢☃€ 😊" * 2, "😊", "B", -1, "Ae¢☃€ BAe¢☃€ B"), + ]) + def test_replace_unicode(self, buf, old, new, count, res, dt): + buf = np.array(buf, dtype=dt) + old = np.array(old, dtype=dt) + new = np.array(new, dtype=dt) + res = np.array(res, dtype=dt) + assert_array_equal(np.strings.replace(buf, old, new, count), res) + + @pytest.mark.parametrize("in_", [ + '\U00010401', + '\U00010427', + '\U00010429', + '\U0001044E', + '\U0001D7F6', + '\U00011066', + '\U000104A0', + pytest.param('\U0001F107', marks=pytest.mark.xfail( + sys.platform == 'win32' and IS_PYPY_LT_7_3_16, + reason="PYPY bug in Py_UNICODE_ISALNUM", + strict=True)), + ]) + def test_isalnum_unicode(self, in_, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.isalnum(in_), True) + + @pytest.mark.parametrize("in_,out", [ + ('\u1FFc', False), + ('\u2167', False), + ('\U00010401', False), + ('\U00010427', False), + ('\U0001F40D', False), + ('\U0001F46F', False), + ('\u2177', True), + pytest.param('\U00010429', True, marks=pytest.mark.xfail( + sys.platform == 'win32' and IS_PYPY_LT_7_3_16, + reason="PYPY bug in Py_UNICODE_ISLOWER", + strict=True)), + ('\U0001044E', True), + ]) + def test_islower_unicode(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.islower(in_), out) + + @pytest.mark.parametrize("in_,out", [ + ('\u1FFc', False), + ('\u2167', True), + ('\U00010401', True), + ('\U00010427', True), + ('\U0001F40D', False), + ('\U0001F46F', False), + ('\u2177', False), + pytest.param('\U00010429', False, marks=pytest.mark.xfail( + sys.platform == 'win32' and IS_PYPY_LT_7_3_16, + reason="PYPY bug in Py_UNICODE_ISUPPER", + strict=True)), + ('\U0001044E', False), + ]) + def test_isupper_unicode(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.isupper(in_), out) + + @pytest.mark.parametrize("in_,out", [ + ('\u1FFc', True), + ('Greek \u1FFcitlecases ...', True), + pytest.param('\U00010401\U00010429', True, marks=pytest.mark.xfail( + sys.platform == 'win32' and IS_PYPY_LT_7_3_16, + reason="PYPY bug in Py_UNICODE_ISISTITLE", + strict=True)), + ('\U00010427\U0001044E', True), + pytest.param('\U00010429', False, marks=pytest.mark.xfail( + sys.platform == 'win32' and IS_PYPY_LT_7_3_16, + reason="PYPY bug in Py_UNICODE_ISISTITLE", + strict=True)), + ('\U0001044E', False), + ('\U0001F40D', False), + ('\U0001F46F', False), + ]) + def test_istitle_unicode(self, in_, out, dt): + in_ = np.array(in_, dtype=dt) + assert_array_equal(np.strings.istitle(in_), out) + + @pytest.mark.parametrize("buf,sub,start,end,res", [ + ("Ae¢☃€ 😊" * 2, "😊", 0, None, 6), + ("Ae¢☃€ 😊" * 2, "😊", 7, None, 13), + ]) + def test_index_unicode(self, buf, sub, start, end, res, dt): + buf = np.array(buf, dtype=dt) + sub = np.array(sub, dtype=dt) + assert_array_equal(np.strings.index(buf, sub, start, end), res) + + def test_index_raises_unicode(self, dt): + with pytest.raises(ValueError, match="substring not found"): + np.strings.index("Ae¢☃€ 😊", "😀") + + @pytest.mark.parametrize("buf,res", [ + ("Ae¢☃€ \t 😊", "Ae¢☃€ 😊"), + ("\t\U0001044E", " \U0001044E"), + ]) + def test_expandtabs(self, buf, res, dt): + buf = np.array(buf, dtype=dt) + res = np.array(res, dtype=dt) + assert_array_equal(np.strings.expandtabs(buf), res) + + + +class TestUnicodeOnlyMethodsRaiseWithBytes: + def test_isdecimal_raises(self): + in_ = np.array(b"1") + with assert_raises(TypeError): + np.strings.isdecimal(in_) + + def test_isnumeric_bytes(self): + in_ = np.array(b"1") + with assert_raises(TypeError): + np.strings.isnumeric(in_) + + +def check_itemsize(n_elem, dt): + if dt == "T": + return np.dtype(dt).itemsize + if dt == "S": + return n_elem + if dt == "U": + return n_elem * 4 + +@pytest.mark.parametrize("dt", ["S", "U", "T"]) +class TestReplaceOnArrays: + + def test_replace_count_and_size(self, dt): + a = np.array(["0123456789" * i for i in range(4)], dtype=dt) + r1 = np.strings.replace(a, "5", "ABCDE") + assert r1.dtype.itemsize == check_itemsize(3*10 + 3*4, dt) + r1_res = np.array(["01234ABCDE6789" * i for i in range(4)], dtype=dt) + assert_array_equal(r1, r1_res) + r2 = np.strings.replace(a, "5", "ABCDE", 1) + assert r2.dtype.itemsize == check_itemsize(3*10 + 4, dt) + r3 = np.strings.replace(a, "5", "ABCDE", 0) + assert r3.dtype.itemsize == a.dtype.itemsize + assert_array_equal(r3, a) + # Negative values mean to replace all. + r4 = np.strings.replace(a, "5", "ABCDE", -1) + assert r4.dtype.itemsize == check_itemsize(3*10 + 3*4, dt) + assert_array_equal(r4, r1) + # We can do count on an element-by-element basis. + r5 = np.strings.replace(a, "5", "ABCDE", [-1, -1, -1, 1]) + assert r5.dtype.itemsize == check_itemsize(3*10 + 4, dt) + assert_array_equal(r5, np.array( + ["01234ABCDE6789" * i for i in range(3)] + + ["01234ABCDE6789" + "0123456789" * 2], dtype=dt)) + + def test_replace_broadcasting(self, dt): + a = np.array("0,0,0", dtype=dt) + r1 = np.strings.replace(a, "0", "1", np.arange(3)) + assert r1.dtype == a.dtype + assert_array_equal(r1, np.array(["0,0,0", "1,0,0", "1,1,0"], dtype=dt)) + r2 = np.strings.replace(a, "0", [["1"], ["2"]], np.arange(1, 4)) + assert_array_equal(r2, np.array([["1,0,0", "1,1,0", "1,1,1"], + ["2,0,0", "2,2,0", "2,2,2"]], + dtype=dt)) + r3 = np.strings.replace(a, ["0", "0,0", "0,0,0"], "X") + assert_array_equal(r3, np.array(["X,X,X", "X,0", "X"], dtype=dt)) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_ufunc.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_ufunc.py new file mode 100644 index 0000000000000000000000000000000000000000..dfe20bc577a991b2744a81e740c07825abd8464b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_ufunc.py @@ -0,0 +1,3097 @@ +import warnings +import itertools +import sys +import ctypes as ct +import pickle + +import pytest +from pytest import param + +import numpy as np +import numpy._core.umath as ncu +import numpy._core._umath_tests as umt +import numpy.linalg._umath_linalg as uml +import numpy._core._operand_flag_tests as opflag_tests +import numpy._core._rational_tests as _rational_tests +from numpy.exceptions import AxisError +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_array_equal, + assert_almost_equal, assert_array_almost_equal, assert_no_warnings, + assert_allclose, HAS_REFCOUNT, suppress_warnings, IS_WASM, IS_PYPY, + ) +from numpy.testing._private.utils import requires_memory + + +UNARY_UFUNCS = [obj for obj in np._core.umath.__dict__.values() + if isinstance(obj, np.ufunc)] +UNARY_OBJECT_UFUNCS = [uf for uf in UNARY_UFUNCS if "O->O" in uf.types] + +# Remove functions that do not support `floats` +UNARY_OBJECT_UFUNCS.remove(getattr(np, 'bitwise_count')) + + +class TestUfuncKwargs: + def test_kwarg_exact(self): + assert_raises(TypeError, np.add, 1, 2, castingx='safe') + assert_raises(TypeError, np.add, 1, 2, dtypex=int) + assert_raises(TypeError, np.add, 1, 2, extobjx=[4096]) + assert_raises(TypeError, np.add, 1, 2, outx=None) + assert_raises(TypeError, np.add, 1, 2, sigx='ii->i') + assert_raises(TypeError, np.add, 1, 2, signaturex='ii->i') + assert_raises(TypeError, np.add, 1, 2, subokx=False) + assert_raises(TypeError, np.add, 1, 2, wherex=[True]) + + def test_sig_signature(self): + assert_raises(TypeError, np.add, 1, 2, sig='ii->i', + signature='ii->i') + + def test_sig_dtype(self): + assert_raises(TypeError, np.add, 1, 2, sig='ii->i', + dtype=int) + assert_raises(TypeError, np.add, 1, 2, signature='ii->i', + dtype=int) + + def test_extobj_removed(self): + assert_raises(TypeError, np.add, 1, 2, extobj=[4096]) + + +class TestUfuncGenericLoops: + """Test generic loops. + + The loops to be tested are: + + PyUFunc_ff_f_As_dd_d + PyUFunc_ff_f + PyUFunc_dd_d + PyUFunc_gg_g + PyUFunc_FF_F_As_DD_D + PyUFunc_DD_D + PyUFunc_FF_F + PyUFunc_GG_G + PyUFunc_OO_O + PyUFunc_OO_O_method + PyUFunc_f_f_As_d_d + PyUFunc_d_d + PyUFunc_f_f + PyUFunc_g_g + PyUFunc_F_F_As_D_D + PyUFunc_F_F + PyUFunc_D_D + PyUFunc_G_G + PyUFunc_O_O + PyUFunc_O_O_method + PyUFunc_On_Om + + Where: + + f -- float + d -- double + g -- long double + F -- complex float + D -- complex double + G -- complex long double + O -- python object + + It is difficult to assure that each of these loops is entered from the + Python level as the special cased loops are a moving target and the + corresponding types are architecture dependent. We probably need to + define C level testing ufuncs to get at them. For the time being, I've + just looked at the signatures registered in the build directory to find + relevant functions. + + """ + np_dtypes = [ + (np.single, np.single), (np.single, np.double), + (np.csingle, np.csingle), (np.csingle, np.cdouble), + (np.double, np.double), (np.longdouble, np.longdouble), + (np.cdouble, np.cdouble), (np.clongdouble, np.clongdouble)] + + @pytest.mark.parametrize('input_dtype,output_dtype', np_dtypes) + def test_unary_PyUFunc(self, input_dtype, output_dtype, f=np.exp, x=0, y=1): + xs = np.full(10, input_dtype(x), dtype=output_dtype) + ys = f(xs)[::2] + assert_allclose(ys, y) + assert_equal(ys.dtype, output_dtype) + + def f2(x, y): + return x**y + + @pytest.mark.parametrize('input_dtype,output_dtype', np_dtypes) + def test_binary_PyUFunc(self, input_dtype, output_dtype, f=f2, x=0, y=1): + xs = np.full(10, input_dtype(x), dtype=output_dtype) + ys = f(xs, xs)[::2] + assert_allclose(ys, y) + assert_equal(ys.dtype, output_dtype) + + # class to use in testing object method loops + class foo: + def conjugate(self): + return np.bool(1) + + def logical_xor(self, obj): + return np.bool(1) + + def test_unary_PyUFunc_O_O(self): + x = np.ones(10, dtype=object) + assert_(np.all(np.abs(x) == 1)) + + def test_unary_PyUFunc_O_O_method_simple(self, foo=foo): + x = np.full(10, foo(), dtype=object) + assert_(np.all(np.conjugate(x) == True)) + + def test_binary_PyUFunc_OO_O(self): + x = np.ones(10, dtype=object) + assert_(np.all(np.add(x, x) == 2)) + + def test_binary_PyUFunc_OO_O_method(self, foo=foo): + x = np.full(10, foo(), dtype=object) + assert_(np.all(np.logical_xor(x, x))) + + def test_binary_PyUFunc_On_Om_method(self, foo=foo): + x = np.full((10, 2, 3), foo(), dtype=object) + assert_(np.all(np.logical_xor(x, x))) + + def test_python_complex_conjugate(self): + # The conjugate ufunc should fall back to calling the method: + arr = np.array([1+2j, 3-4j], dtype="O") + assert isinstance(arr[0], complex) + res = np.conjugate(arr) + assert res.dtype == np.dtype("O") + assert_array_equal(res, np.array([1-2j, 3+4j], dtype="O")) + + @pytest.mark.parametrize("ufunc", UNARY_OBJECT_UFUNCS) + def test_unary_PyUFunc_O_O_method_full(self, ufunc): + """Compare the result of the object loop with non-object one""" + val = np.float64(np.pi/4) + + class MyFloat(np.float64): + def __getattr__(self, attr): + try: + return super().__getattr__(attr) + except AttributeError: + return lambda: getattr(np._core.umath, attr)(val) + + # Use 0-D arrays, to ensure the same element call + num_arr = np.array(val, dtype=np.float64) + obj_arr = np.array(MyFloat(val), dtype="O") + + with np.errstate(all="raise"): + try: + res_num = ufunc(num_arr) + except Exception as exc: + with assert_raises(type(exc)): + ufunc(obj_arr) + else: + res_obj = ufunc(obj_arr) + assert_array_almost_equal(res_num.astype("O"), res_obj) + + +def _pickleable_module_global(): + pass + + +class TestUfunc: + def test_pickle(self): + for proto in range(2, pickle.HIGHEST_PROTOCOL + 1): + assert_(pickle.loads(pickle.dumps(np.sin, + protocol=proto)) is np.sin) + + # Check that ufunc not defined in the top level numpy namespace + # such as numpy._core._rational_tests.test_add can also be pickled + res = pickle.loads(pickle.dumps(_rational_tests.test_add, + protocol=proto)) + assert_(res is _rational_tests.test_add) + + def test_pickle_withstring(self): + astring = (b"cnumpy.core\n_ufunc_reconstruct\np0\n" + b"(S'numpy._core.umath'\np1\nS'cos'\np2\ntp3\nRp4\n.") + assert_(pickle.loads(astring) is np.cos) + + @pytest.mark.skipif(IS_PYPY, reason="'is' check does not work on PyPy") + def test_pickle_name_is_qualname(self): + # This tests that a simplification of our ufunc pickle code will + # lead to allowing qualnames as names. Future ufuncs should + # possible add a specific qualname, or a hook into pickling instead + # (dask+numba may benefit). + _pickleable_module_global.ufunc = umt._pickleable_module_global_ufunc + + obj = pickle.loads(pickle.dumps(_pickleable_module_global.ufunc)) + assert obj is umt._pickleable_module_global_ufunc + + def test_reduceat_shifting_sum(self): + L = 6 + x = np.arange(L) + idx = np.array(list(zip(np.arange(L - 2), np.arange(L - 2) + 2))).ravel() + assert_array_equal(np.add.reduceat(x, idx)[::2], [1, 3, 5, 7]) + + def test_all_ufunc(self): + """Try to check presence and results of all ufuncs. + + The list of ufuncs comes from generate_umath.py and is as follows: + + ===== ==== ============= =============== ======================== + done args function types notes + ===== ==== ============= =============== ======================== + n 1 conjugate nums + O + n 1 absolute nums + O complex -> real + n 1 negative nums + O + n 1 sign nums + O -> int + n 1 invert bool + ints + O flts raise an error + n 1 degrees real + M cmplx raise an error + n 1 radians real + M cmplx raise an error + n 1 arccos flts + M + n 1 arccosh flts + M + n 1 arcsin flts + M + n 1 arcsinh flts + M + n 1 arctan flts + M + n 1 arctanh flts + M + n 1 cos flts + M + n 1 sin flts + M + n 1 tan flts + M + n 1 cosh flts + M + n 1 sinh flts + M + n 1 tanh flts + M + n 1 exp flts + M + n 1 expm1 flts + M + n 1 log flts + M + n 1 log10 flts + M + n 1 log1p flts + M + n 1 sqrt flts + M real x < 0 raises error + n 1 ceil real + M + n 1 trunc real + M + n 1 floor real + M + n 1 fabs real + M + n 1 rint flts + M + n 1 isnan flts -> bool + n 1 isinf flts -> bool + n 1 isfinite flts -> bool + n 1 signbit real -> bool + n 1 modf real -> (frac, int) + n 1 logical_not bool + nums + M -> bool + n 2 left_shift ints + O flts raise an error + n 2 right_shift ints + O flts raise an error + n 2 add bool + nums + O boolean + is || + n 2 subtract bool + nums + O boolean - is ^ + n 2 multiply bool + nums + O boolean * is & + n 2 divide nums + O + n 2 floor_divide nums + O + n 2 true_divide nums + O bBhH -> f, iIlLqQ -> d + n 2 fmod nums + M + n 2 power nums + O + n 2 greater bool + nums + O -> bool + n 2 greater_equal bool + nums + O -> bool + n 2 less bool + nums + O -> bool + n 2 less_equal bool + nums + O -> bool + n 2 equal bool + nums + O -> bool + n 2 not_equal bool + nums + O -> bool + n 2 logical_and bool + nums + M -> bool + n 2 logical_or bool + nums + M -> bool + n 2 logical_xor bool + nums + M -> bool + n 2 maximum bool + nums + O + n 2 minimum bool + nums + O + n 2 bitwise_and bool + ints + O flts raise an error + n 2 bitwise_or bool + ints + O flts raise an error + n 2 bitwise_xor bool + ints + O flts raise an error + n 2 arctan2 real + M + n 2 remainder ints + real + O + n 2 hypot real + M + ===== ==== ============= =============== ======================== + + Types other than those listed will be accepted, but they are cast to + the smallest compatible type for which the function is defined. The + casting rules are: + + bool -> int8 -> float32 + ints -> double + + """ + pass + + # from include/numpy/ufuncobject.h + size_inferred = 2 + can_ignore = 4 + def test_signature0(self): + # the arguments to test_signature are: nin, nout, core_signature + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 2, 1, "(i),(i)->()") + assert_equal(enabled, 1) + assert_equal(num_dims, (1, 1, 0)) + assert_equal(ixs, (0, 0)) + assert_equal(flags, (self.size_inferred,)) + assert_equal(sizes, (-1,)) + + def test_signature1(self): + # empty core signature; treat as plain ufunc (with trivial core) + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 2, 1, "(),()->()") + assert_equal(enabled, 0) + assert_equal(num_dims, (0, 0, 0)) + assert_equal(ixs, ()) + assert_equal(flags, ()) + assert_equal(sizes, ()) + + def test_signature2(self): + # more complicated names for variables + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 2, 1, "(i1,i2),(J_1)->(_kAB)") + assert_equal(enabled, 1) + assert_equal(num_dims, (2, 1, 1)) + assert_equal(ixs, (0, 1, 2, 3)) + assert_equal(flags, (self.size_inferred,)*4) + assert_equal(sizes, (-1, -1, -1, -1)) + + def test_signature3(self): + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 2, 1, "(i1, i12), (J_1)->(i12, i2)") + assert_equal(enabled, 1) + assert_equal(num_dims, (2, 1, 2)) + assert_equal(ixs, (0, 1, 2, 1, 3)) + assert_equal(flags, (self.size_inferred,)*4) + assert_equal(sizes, (-1, -1, -1, -1)) + + def test_signature4(self): + # matrix_multiply signature from _umath_tests + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 2, 1, "(n,k),(k,m)->(n,m)") + assert_equal(enabled, 1) + assert_equal(num_dims, (2, 2, 2)) + assert_equal(ixs, (0, 1, 1, 2, 0, 2)) + assert_equal(flags, (self.size_inferred,)*3) + assert_equal(sizes, (-1, -1, -1)) + + def test_signature5(self): + # matmul signature from _umath_tests + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 2, 1, "(n?,k),(k,m?)->(n?,m?)") + assert_equal(enabled, 1) + assert_equal(num_dims, (2, 2, 2)) + assert_equal(ixs, (0, 1, 1, 2, 0, 2)) + assert_equal(flags, (self.size_inferred | self.can_ignore, + self.size_inferred, + self.size_inferred | self.can_ignore)) + assert_equal(sizes, (-1, -1, -1)) + + def test_signature6(self): + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 1, 1, "(3)->()") + assert_equal(enabled, 1) + assert_equal(num_dims, (1, 0)) + assert_equal(ixs, (0,)) + assert_equal(flags, (0,)) + assert_equal(sizes, (3,)) + + def test_signature7(self): + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 3, 1, "(3),(03,3),(n)->(9)") + assert_equal(enabled, 1) + assert_equal(num_dims, (1, 2, 1, 1)) + assert_equal(ixs, (0, 0, 0, 1, 2)) + assert_equal(flags, (0, self.size_inferred, 0)) + assert_equal(sizes, (3, -1, 9)) + + def test_signature8(self): + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 3, 1, "(3?),(3?,3?),(n)->(9)") + assert_equal(enabled, 1) + assert_equal(num_dims, (1, 2, 1, 1)) + assert_equal(ixs, (0, 0, 0, 1, 2)) + assert_equal(flags, (self.can_ignore, self.size_inferred, 0)) + assert_equal(sizes, (3, -1, 9)) + + def test_signature9(self): + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 1, 1, "( 3) -> ( )") + assert_equal(enabled, 1) + assert_equal(num_dims, (1, 0)) + assert_equal(ixs, (0,)) + assert_equal(flags, (0,)) + assert_equal(sizes, (3,)) + + def test_signature10(self): + enabled, num_dims, ixs, flags, sizes = umt.test_signature( + 3, 1, "( 3? ) , (3? , 3?) ,(n )-> ( 9)") + assert_equal(enabled, 1) + assert_equal(num_dims, (1, 2, 1, 1)) + assert_equal(ixs, (0, 0, 0, 1, 2)) + assert_equal(flags, (self.can_ignore, self.size_inferred, 0)) + assert_equal(sizes, (3, -1, 9)) + + def test_signature_failure_extra_parenthesis(self): + with assert_raises(ValueError): + umt.test_signature(2, 1, "((i)),(i)->()") + + def test_signature_failure_mismatching_parenthesis(self): + with assert_raises(ValueError): + umt.test_signature(2, 1, "(i),)i(->()") + + def test_signature_failure_signature_missing_input_arg(self): + with assert_raises(ValueError): + umt.test_signature(2, 1, "(i),->()") + + def test_signature_failure_signature_missing_output_arg(self): + with assert_raises(ValueError): + umt.test_signature(2, 2, "(i),(i)->()") + + def test_get_signature(self): + assert_equal(np.vecdot.signature, "(n),(n)->()") + + def test_forced_sig(self): + a = 0.5*np.arange(3, dtype='f8') + assert_equal(np.add(a, 0.5), [0.5, 1, 1.5]) + with pytest.warns(DeprecationWarning): + assert_equal(np.add(a, 0.5, sig='i', casting='unsafe'), [0, 0, 1]) + assert_equal(np.add(a, 0.5, sig='ii->i', casting='unsafe'), [0, 0, 1]) + with pytest.warns(DeprecationWarning): + assert_equal(np.add(a, 0.5, sig=('i4',), casting='unsafe'), + [0, 0, 1]) + assert_equal(np.add(a, 0.5, sig=('i4', 'i4', 'i4'), + casting='unsafe'), [0, 0, 1]) + + b = np.zeros((3,), dtype='f8') + np.add(a, 0.5, out=b) + assert_equal(b, [0.5, 1, 1.5]) + b[:] = 0 + with pytest.warns(DeprecationWarning): + np.add(a, 0.5, sig='i', out=b, casting='unsafe') + assert_equal(b, [0, 0, 1]) + b[:] = 0 + np.add(a, 0.5, sig='ii->i', out=b, casting='unsafe') + assert_equal(b, [0, 0, 1]) + b[:] = 0 + with pytest.warns(DeprecationWarning): + np.add(a, 0.5, sig=('i4',), out=b, casting='unsafe') + assert_equal(b, [0, 0, 1]) + b[:] = 0 + np.add(a, 0.5, sig=('i4', 'i4', 'i4'), out=b, casting='unsafe') + assert_equal(b, [0, 0, 1]) + + def test_signature_all_None(self): + # signature all None, is an acceptable alternative (since 1.21) + # to not providing a signature. + res1 = np.add([3], [4], sig=(None, None, None)) + res2 = np.add([3], [4]) + assert_array_equal(res1, res2) + res1 = np.maximum([3], [4], sig=(None, None, None)) + res2 = np.maximum([3], [4]) + assert_array_equal(res1, res2) + + with pytest.raises(TypeError): + # special case, that would be deprecated anyway, so errors: + np.add(3, 4, signature=(None,)) + + def test_signature_dtype_type(self): + # Since that will be the normal behaviour (past NumPy 1.21) + # we do support the types already: + float_dtype = type(np.dtype(np.float64)) + np.add(3, 4, signature=(float_dtype, float_dtype, None)) + + @pytest.mark.parametrize("get_kwarg", [ + lambda dt: dict(dtype=x), + lambda dt: dict(signature=(x, None, None))]) + def test_signature_dtype_instances_allowed(self, get_kwarg): + # We allow certain dtype instances when there is a clear singleton + # and the given one is equivalent; mainly for backcompat. + int64 = np.dtype("int64") + int64_2 = pickle.loads(pickle.dumps(int64)) + # Relies on pickling behavior, if assert fails just remove test... + assert int64 is not int64_2 + + assert np.add(1, 2, **get_kwarg(int64_2)).dtype == int64 + td = np.timedelta(2, "s") + assert np.add(td, td, **get_kwarg("m8")).dtype == "m8[s]" + + @pytest.mark.parametrize("get_kwarg", [ + param(lambda x: dict(dtype=x), id="dtype"), + param(lambda x: dict(signature=(x, None, None)), id="signature")]) + def test_signature_dtype_instances_allowed(self, get_kwarg): + msg = "The `dtype` and `signature` arguments to ufuncs" + + with pytest.raises(TypeError, match=msg): + np.add(3, 5, **get_kwarg(np.dtype("int64").newbyteorder())) + with pytest.raises(TypeError, match=msg): + np.add(3, 5, **get_kwarg(np.dtype("m8[ns]"))) + with pytest.raises(TypeError, match=msg): + np.add(3, 5, **get_kwarg("m8[ns]")) + + @pytest.mark.parametrize("casting", ["unsafe", "same_kind", "safe"]) + def test_partial_signature_mismatch(self, casting): + # If the second argument matches already, no need to specify it: + res = np.ldexp(np.float32(1.), np.int_(2), dtype="d") + assert res.dtype == "d" + res = np.ldexp(np.float32(1.), np.int_(2), signature=(None, None, "d")) + assert res.dtype == "d" + + # ldexp only has a loop for long input as second argument, overriding + # the output cannot help with that (no matter the casting) + with pytest.raises(TypeError): + np.ldexp(1., np.uint64(3), dtype="d") + with pytest.raises(TypeError): + np.ldexp(1., np.uint64(3), signature=(None, None, "d")) + + def test_partial_signature_mismatch_with_cache(self): + with pytest.raises(TypeError): + np.add(np.float16(1), np.uint64(2), sig=("e", "d", None)) + # Ensure e,d->None is in the dispatching cache (double loop) + np.add(np.float16(1), np.float64(2)) + # The error must still be raised: + with pytest.raises(TypeError): + np.add(np.float16(1), np.uint64(2), sig=("e", "d", None)) + + @pytest.mark.xfail(np._get_promotion_state() != "legacy", + reason="NEP 50 impl breaks casting checks when `dtype=` is used " + "together with python scalars.") + def test_use_output_signature_for_all_arguments(self): + # Test that providing only `dtype=` or `signature=(None, None, dtype)` + # is sufficient if falling back to a homogeneous signature works. + # In this case, the `intp, intp -> intp` loop is chosen. + res = np.power(1.5, 2.8, dtype=np.intp, casting="unsafe") + assert res == 1 # the cast happens first. + res = np.power(1.5, 2.8, signature=(None, None, np.intp), + casting="unsafe") + assert res == 1 + with pytest.raises(TypeError): + # the unsafe casting would normally cause errors though: + np.power(1.5, 2.8, dtype=np.intp) + + def test_signature_errors(self): + with pytest.raises(TypeError, + match="the signature object to ufunc must be a string or"): + np.add(3, 4, signature=123.) # neither a string nor a tuple + + with pytest.raises(ValueError): + # bad symbols that do not translate to dtypes + np.add(3, 4, signature="%^->#") + + with pytest.raises(ValueError): + np.add(3, 4, signature=b"ii-i") # incomplete and byte string + + with pytest.raises(ValueError): + np.add(3, 4, signature="ii>i") # incomplete string + + with pytest.raises(ValueError): + np.add(3, 4, signature=(None, "f8")) # bad length + + with pytest.raises(UnicodeDecodeError): + np.add(3, 4, signature=b"\xff\xff->i") + + def test_forced_dtype_times(self): + # Signatures only set the type numbers (not the actual loop dtypes) + # so using `M` in a signature/dtype should generally work: + a = np.array(['2010-01-02', '1999-03-14', '1833-03'], dtype='>M8[D]') + np.maximum(a, a, dtype="M") + np.maximum.reduce(a, dtype="M") + + arr = np.arange(10, dtype="m8[s]") + np.add(arr, arr, dtype="m") + np.maximum(arr, arr, dtype="m") + + @pytest.mark.parametrize("ufunc", [np.add, np.sqrt]) + def test_cast_safety(self, ufunc): + """Basic test for the safest casts, because ufuncs inner loops can + indicate a cast-safety as well (which is normally always "no"). + """ + def call_ufunc(arr, **kwargs): + return ufunc(*(arr,) * ufunc.nin, **kwargs) + + arr = np.array([1., 2., 3.], dtype=np.float32) + arr_bs = arr.astype(arr.dtype.newbyteorder()) + expected = call_ufunc(arr) + # Normally, a "no" cast: + res = call_ufunc(arr, casting="no") + assert_array_equal(expected, res) + # Byte-swapping is not allowed with "no" though: + with pytest.raises(TypeError): + call_ufunc(arr_bs, casting="no") + + # But is allowed with "equiv": + res = call_ufunc(arr_bs, casting="equiv") + assert_array_equal(expected, res) + + # Casting to float64 is safe, but not equiv: + with pytest.raises(TypeError): + call_ufunc(arr_bs, dtype=np.float64, casting="equiv") + + # but it is safe cast: + res = call_ufunc(arr_bs, dtype=np.float64, casting="safe") + expected = call_ufunc(arr.astype(np.float64)) # upcast + assert_array_equal(expected, res) + + def test_true_divide(self): + a = np.array(10) + b = np.array(20) + tgt = np.array(0.5) + + for tc in 'bhilqBHILQefdgFDG': + dt = np.dtype(tc) + aa = a.astype(dt) + bb = b.astype(dt) + + # Check result value and dtype. + for x, y in itertools.product([aa, -aa], [bb, -bb]): + + # Check with no output type specified + if tc in 'FDG': + tgt = complex(x)/complex(y) + else: + tgt = float(x)/float(y) + + res = np.true_divide(x, y) + rtol = max(np.finfo(res).resolution, 1e-15) + assert_allclose(res, tgt, rtol=rtol) + + if tc in 'bhilqBHILQ': + assert_(res.dtype.name == 'float64') + else: + assert_(res.dtype.name == dt.name ) + + # Check with output type specified. This also checks for the + # incorrect casts in issue gh-3484 because the unary '-' does + # not change types, even for unsigned types, Hence casts in the + # ufunc from signed to unsigned and vice versa will lead to + # errors in the values. + for tcout in 'bhilqBHILQ': + dtout = np.dtype(tcout) + assert_raises(TypeError, np.true_divide, x, y, dtype=dtout) + + for tcout in 'efdg': + dtout = np.dtype(tcout) + if tc in 'FDG': + # Casting complex to float is not allowed + assert_raises(TypeError, np.true_divide, x, y, dtype=dtout) + else: + tgt = float(x)/float(y) + rtol = max(np.finfo(dtout).resolution, 1e-15) + # The value of tiny for double double is NaN + with suppress_warnings() as sup: + sup.filter(UserWarning) + if not np.isnan(np.finfo(dtout).tiny): + atol = max(np.finfo(dtout).tiny, 3e-308) + else: + atol = 3e-308 + # Some test values result in invalid for float16 + # and the cast to it may overflow to inf. + with np.errstate(invalid='ignore', over='ignore'): + res = np.true_divide(x, y, dtype=dtout) + if not np.isfinite(res) and tcout == 'e': + continue + assert_allclose(res, tgt, rtol=rtol, atol=atol) + assert_(res.dtype.name == dtout.name) + + for tcout in 'FDG': + dtout = np.dtype(tcout) + tgt = complex(x)/complex(y) + rtol = max(np.finfo(dtout).resolution, 1e-15) + # The value of tiny for double double is NaN + with suppress_warnings() as sup: + sup.filter(UserWarning) + if not np.isnan(np.finfo(dtout).tiny): + atol = max(np.finfo(dtout).tiny, 3e-308) + else: + atol = 3e-308 + res = np.true_divide(x, y, dtype=dtout) + if not np.isfinite(res): + continue + assert_allclose(res, tgt, rtol=rtol, atol=atol) + assert_(res.dtype.name == dtout.name) + + # Check booleans + a = np.ones((), dtype=np.bool) + res = np.true_divide(a, a) + assert_(res == 1.0) + assert_(res.dtype.name == 'float64') + res = np.true_divide(~a, a) + assert_(res == 0.0) + assert_(res.dtype.name == 'float64') + + def test_sum_stability(self): + a = np.ones(500, dtype=np.float32) + assert_almost_equal((a / 10.).sum() - a.size / 10., 0, 4) + + a = np.ones(500, dtype=np.float64) + assert_almost_equal((a / 10.).sum() - a.size / 10., 0, 13) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_sum(self): + for dt in (int, np.float16, np.float32, np.float64, np.longdouble): + for v in (0, 1, 2, 7, 8, 9, 15, 16, 19, 127, + 128, 1024, 1235): + # warning if sum overflows, which it does in float16 + with warnings.catch_warnings(record=True) as w: + warnings.simplefilter("always", RuntimeWarning) + + tgt = dt(v * (v + 1) / 2) + overflow = not np.isfinite(tgt) + assert_equal(len(w), 1 * overflow) + + d = np.arange(1, v + 1, dtype=dt) + + assert_almost_equal(np.sum(d), tgt) + assert_equal(len(w), 2 * overflow) + + assert_almost_equal(np.sum(d[::-1]), tgt) + assert_equal(len(w), 3 * overflow) + + d = np.ones(500, dtype=dt) + assert_almost_equal(np.sum(d[::2]), 250.) + assert_almost_equal(np.sum(d[1::2]), 250.) + assert_almost_equal(np.sum(d[::3]), 167.) + assert_almost_equal(np.sum(d[1::3]), 167.) + assert_almost_equal(np.sum(d[::-2]), 250.) + assert_almost_equal(np.sum(d[-1::-2]), 250.) + assert_almost_equal(np.sum(d[::-3]), 167.) + assert_almost_equal(np.sum(d[-1::-3]), 167.) + # sum with first reduction entry != 0 + d = np.ones((1,), dtype=dt) + d += d + assert_almost_equal(d, 2.) + + def test_sum_complex(self): + for dt in (np.complex64, np.complex128, np.clongdouble): + for v in (0, 1, 2, 7, 8, 9, 15, 16, 19, 127, + 128, 1024, 1235): + tgt = dt(v * (v + 1) / 2) - dt((v * (v + 1) / 2) * 1j) + d = np.empty(v, dtype=dt) + d.real = np.arange(1, v + 1) + d.imag = -np.arange(1, v + 1) + assert_almost_equal(np.sum(d), tgt) + assert_almost_equal(np.sum(d[::-1]), tgt) + + d = np.ones(500, dtype=dt) + 1j + assert_almost_equal(np.sum(d[::2]), 250. + 250j) + assert_almost_equal(np.sum(d[1::2]), 250. + 250j) + assert_almost_equal(np.sum(d[::3]), 167. + 167j) + assert_almost_equal(np.sum(d[1::3]), 167. + 167j) + assert_almost_equal(np.sum(d[::-2]), 250. + 250j) + assert_almost_equal(np.sum(d[-1::-2]), 250. + 250j) + assert_almost_equal(np.sum(d[::-3]), 167. + 167j) + assert_almost_equal(np.sum(d[-1::-3]), 167. + 167j) + # sum with first reduction entry != 0 + d = np.ones((1,), dtype=dt) + 1j + d += d + assert_almost_equal(d, 2. + 2j) + + def test_sum_initial(self): + # Integer, single axis + assert_equal(np.sum([3], initial=2), 5) + + # Floating point + assert_almost_equal(np.sum([0.2], initial=0.1), 0.3) + + # Multiple non-adjacent axes + assert_equal(np.sum(np.ones((2, 3, 5), dtype=np.int64), axis=(0, 2), initial=2), + [12, 12, 12]) + + def test_sum_where(self): + # More extensive tests done in test_reduction_with_where. + assert_equal(np.sum([[1., 2.], [3., 4.]], where=[True, False]), 4.) + assert_equal(np.sum([[1., 2.], [3., 4.]], axis=0, initial=5., + where=[True, False]), [9., 5.]) + + def test_vecdot(self): + arr1 = np.arange(6).reshape((2, 3)) + arr2 = np.arange(3).reshape((1, 3)) + + actual = np.vecdot(arr1, arr2) + expected = np.array([5, 14]) + + assert_array_equal(actual, expected) + + actual2 = np.vecdot(arr1.T, arr2.T, axis=-2) + assert_array_equal(actual2, expected) + + actual3 = np.vecdot(arr1.astype("object"), arr2) + assert_array_equal(actual3, expected.astype("object")) + + def test_vecdot_complex(self): + arr1 = np.array([1, 2j, 3]) + arr2 = np.array([1, 2, 3]) + + actual = np.vecdot(arr1, arr2) + expected = np.array([10-4j]) + assert_array_equal(actual, expected) + + actual2 = np.vecdot(arr2, arr1) + assert_array_equal(actual2, expected.conj()) + + actual3 = np.vecdot(arr1.astype("object"), arr2.astype("object")) + assert_array_equal(actual3, expected.astype("object")) + + def test_vecdot_subclass(self): + class MySubclass(np.ndarray): + pass + + arr1 = np.arange(6).reshape((2, 3)).view(MySubclass) + arr2 = np.arange(3).reshape((1, 3)).view(MySubclass) + result = np.vecdot(arr1, arr2) + assert isinstance(result, MySubclass) + + def test_vecdot_object_no_conjugate(self): + arr = np.array(["1", "2"], dtype=object) + with pytest.raises(AttributeError, match="conjugate"): + np.vecdot(arr, arr) + + def test_vecdot_object_breaks_outer_loop_on_error(self): + arr1 = np.ones((3, 3)).astype(object) + arr2 = arr1.copy() + arr2[1, 1] = None + out = np.zeros(3).astype(object) + with pytest.raises(TypeError, match=r"\*: 'float' and 'NoneType'"): + np.vecdot(arr1, arr2, out=out) + assert out[0] == 3 + assert out[1] == out[2] == 0 + + def test_broadcast(self): + msg = "broadcast" + a = np.arange(4).reshape((2, 1, 2)) + b = np.arange(4).reshape((1, 2, 2)) + assert_array_equal(np.vecdot(a, b), np.sum(a*b, axis=-1), err_msg=msg) + msg = "extend & broadcast loop dimensions" + b = np.arange(4).reshape((2, 2)) + assert_array_equal(np.vecdot(a, b), np.sum(a*b, axis=-1), err_msg=msg) + # Broadcast in core dimensions should fail + a = np.arange(8).reshape((4, 2)) + b = np.arange(4).reshape((4, 1)) + assert_raises(ValueError, np.vecdot, a, b) + # Extend core dimensions should fail + a = np.arange(8).reshape((4, 2)) + b = np.array(7) + assert_raises(ValueError, np.vecdot, a, b) + # Broadcast should fail + a = np.arange(2).reshape((2, 1, 1)) + b = np.arange(3).reshape((3, 1, 1)) + assert_raises(ValueError, np.vecdot, a, b) + + # Writing to a broadcasted array with overlap should warn, gh-2705 + a = np.arange(2) + b = np.arange(4).reshape((2, 2)) + u, v = np.broadcast_arrays(a, b) + assert_equal(u.strides[0], 0) + x = u + v + with warnings.catch_warnings(record=True) as w: + warnings.simplefilter("always") + u += v + assert_equal(len(w), 1) + assert_(x[0, 0] != u[0, 0]) + + # Output reduction should not be allowed. + # See gh-15139 + a = np.arange(6).reshape(3, 2) + b = np.ones(2) + out = np.empty(()) + assert_raises(ValueError, np.vecdot, a, b, out) + out2 = np.empty(3) + c = np.vecdot(a, b, out2) + assert_(c is out2) + + def test_out_broadcasts(self): + # For ufuncs and gufuncs (not for reductions), we currently allow + # the output to cause broadcasting of the input arrays. + # both along dimensions with shape 1 and dimensions which do not + # exist at all in the inputs. + arr = np.arange(3).reshape(1, 3) + out = np.empty((5, 4, 3)) + np.add(arr, arr, out=out) + assert (out == np.arange(3) * 2).all() + + # The same holds for gufuncs (gh-16484) + np.vecdot(arr, arr, out=out) + # the result would be just a scalar `5`, but is broadcast fully: + assert (out == 5).all() + + @pytest.mark.parametrize(["arr", "out"], [ + ([2], np.empty(())), + ([1, 2], np.empty(1)), + (np.ones((4, 3)), np.empty((4, 1)))], + ids=["(1,)->()", "(2,)->(1,)", "(4, 3)->(4, 1)"]) + def test_out_broadcast_errors(self, arr, out): + # Output is (currently) allowed to broadcast inputs, but it cannot be + # smaller than the actual result. + with pytest.raises(ValueError, match="non-broadcastable"): + np.positive(arr, out=out) + + with pytest.raises(ValueError, match="non-broadcastable"): + np.add(np.ones(()), arr, out=out) + + def test_type_cast(self): + msg = "type cast" + a = np.arange(6, dtype='short').reshape((2, 3)) + assert_array_equal(np.vecdot(a, a), np.sum(a*a, axis=-1), + err_msg=msg) + msg = "type cast on one argument" + a = np.arange(6).reshape((2, 3)) + b = a + 0.1 + assert_array_almost_equal(np.vecdot(a, b), np.sum(a*b, axis=-1), + err_msg=msg) + + def test_endian(self): + msg = "big endian" + a = np.arange(6, dtype='>i4').reshape((2, 3)) + assert_array_equal(np.vecdot(a, a), np.sum(a*a, axis=-1), + err_msg=msg) + msg = "little endian" + a = np.arange(6, dtype='()' + a = np.arange(27.).reshape((3, 3, 3)) + b = np.arange(10., 19.).reshape((3, 1, 3)) + # basic tests on inputs (outputs tested below with matrix_multiply). + c = np.vecdot(a, b) + assert_array_equal(c, (a * b).sum(-1)) + # default + c = np.vecdot(a, b, axes=[(-1,), (-1,), ()]) + assert_array_equal(c, (a * b).sum(-1)) + # integers ok for single axis. + c = np.vecdot(a, b, axes=[-1, -1, ()]) + assert_array_equal(c, (a * b).sum(-1)) + # mix fine + c = np.vecdot(a, b, axes=[(-1,), -1, ()]) + assert_array_equal(c, (a * b).sum(-1)) + # can omit last axis. + c = np.vecdot(a, b, axes=[-1, -1]) + assert_array_equal(c, (a * b).sum(-1)) + # can pass in other types of integer (with __index__ protocol) + c = np.vecdot(a, b, axes=[np.int8(-1), np.array(-1, dtype=np.int32)]) + assert_array_equal(c, (a * b).sum(-1)) + # swap some axes + c = np.vecdot(a, b, axes=[0, 0]) + assert_array_equal(c, (a * b).sum(0)) + c = np.vecdot(a, b, axes=[0, 2]) + assert_array_equal(c, (a.transpose(1, 2, 0) * b).sum(-1)) + # Check errors for improperly constructed axes arguments. + # should have list. + assert_raises(TypeError, np.vecdot, a, b, axes=-1) + # needs enough elements + assert_raises(ValueError, np.vecdot, a, b, axes=[-1]) + # should pass in indices. + assert_raises(TypeError, np.vecdot, a, b, axes=[-1.0, -1.0]) + assert_raises(TypeError, np.vecdot, a, b, axes=[(-1.0,), -1]) + assert_raises(TypeError, np.vecdot, a, b, axes=[None, 1]) + # cannot pass an index unless there is only one dimension + # (output is wrong in this case) + assert_raises(AxisError, np.vecdot, a, b, axes=[-1, -1, -1]) + # or pass in generally the wrong number of axes + assert_raises(AxisError, np.vecdot, a, b, axes=[-1, -1, (-1,)]) + assert_raises(AxisError, np.vecdot, a, b, axes=[-1, (-2, -1), ()]) + # axes need to have same length. + assert_raises(ValueError, np.vecdot, a, b, axes=[0, 1]) + + # matrix_multiply signature: '(m,n),(n,p)->(m,p)' + mm = umt.matrix_multiply + a = np.arange(12).reshape((2, 3, 2)) + b = np.arange(8).reshape((2, 2, 2, 1)) + 1 + # Sanity check. + c = mm(a, b) + assert_array_equal(c, np.matmul(a, b)) + # Default axes. + c = mm(a, b, axes=[(-2, -1), (-2, -1), (-2, -1)]) + assert_array_equal(c, np.matmul(a, b)) + # Default with explicit axes. + c = mm(a, b, axes=[(1, 2), (2, 3), (2, 3)]) + assert_array_equal(c, np.matmul(a, b)) + # swap some axes. + c = mm(a, b, axes=[(0, -1), (1, 2), (-2, -1)]) + assert_array_equal(c, np.matmul(a.transpose(1, 0, 2), + b.transpose(0, 3, 1, 2))) + # Default with output array. + c = np.empty((2, 2, 3, 1)) + d = mm(a, b, out=c, axes=[(1, 2), (2, 3), (2, 3)]) + assert_(c is d) + assert_array_equal(c, np.matmul(a, b)) + # Transposed output array + c = np.empty((1, 2, 2, 3)) + d = mm(a, b, out=c, axes=[(-2, -1), (-2, -1), (3, 0)]) + assert_(c is d) + assert_array_equal(c, np.matmul(a, b).transpose(3, 0, 1, 2)) + # Check errors for improperly constructed axes arguments. + # wrong argument + assert_raises(TypeError, mm, a, b, axis=1) + # axes should be list + assert_raises(TypeError, mm, a, b, axes=1) + assert_raises(TypeError, mm, a, b, axes=((-2, -1), (-2, -1), (-2, -1))) + # list needs to have right length + assert_raises(ValueError, mm, a, b, axes=[]) + assert_raises(ValueError, mm, a, b, axes=[(-2, -1)]) + # list should not contain None, or lists + assert_raises(TypeError, mm, a, b, axes=[None, None, None]) + assert_raises(TypeError, + mm, a, b, axes=[[-2, -1], [-2, -1], [-2, -1]]) + assert_raises(TypeError, + mm, a, b, axes=[(-2, -1), (-2, -1), [-2, -1]]) + assert_raises(TypeError, mm, a, b, axes=[(-2, -1), (-2, -1), None]) + # single integers are AxisErrors if more are required + assert_raises(AxisError, mm, a, b, axes=[-1, -1, -1]) + assert_raises(AxisError, mm, a, b, axes=[(-2, -1), (-2, -1), -1]) + # tuples should not have duplicated values + assert_raises(ValueError, mm, a, b, axes=[(-2, -1), (-2, -1), (-2, -2)]) + # arrays should have enough axes. + z = np.zeros((2, 2)) + assert_raises(ValueError, mm, z, z[0]) + assert_raises(ValueError, mm, z, z, out=z[:, 0]) + assert_raises(ValueError, mm, z[1], z, axes=[0, 1]) + assert_raises(ValueError, mm, z, z, out=z[0], axes=[0, 1]) + # Regular ufuncs should not accept axes. + assert_raises(TypeError, np.add, 1., 1., axes=[0]) + # should be able to deal with bad unrelated kwargs. + assert_raises(TypeError, mm, z, z, axes=[0, 1], parrot=True) + + def test_axis_argument(self): + # vecdot signature: '(n),(n)->()' + a = np.arange(27.).reshape((3, 3, 3)) + b = np.arange(10., 19.).reshape((3, 1, 3)) + c = np.vecdot(a, b) + assert_array_equal(c, (a * b).sum(-1)) + c = np.vecdot(a, b, axis=-1) + assert_array_equal(c, (a * b).sum(-1)) + out = np.zeros_like(c) + d = np.vecdot(a, b, axis=-1, out=out) + assert_(d is out) + assert_array_equal(d, c) + c = np.vecdot(a, b, axis=0) + assert_array_equal(c, (a * b).sum(0)) + # Sanity checks on innerwt and cumsum. + a = np.arange(6).reshape((2, 3)) + b = np.arange(10, 16).reshape((2, 3)) + w = np.arange(20, 26).reshape((2, 3)) + assert_array_equal(umt.innerwt(a, b, w, axis=0), + np.sum(a * b * w, axis=0)) + assert_array_equal(umt.cumsum(a, axis=0), np.cumsum(a, axis=0)) + assert_array_equal(umt.cumsum(a, axis=-1), np.cumsum(a, axis=-1)) + out = np.empty_like(a) + b = umt.cumsum(a, out=out, axis=0) + assert_(out is b) + assert_array_equal(b, np.cumsum(a, axis=0)) + b = umt.cumsum(a, out=out, axis=1) + assert_(out is b) + assert_array_equal(b, np.cumsum(a, axis=-1)) + # Check errors. + # Cannot pass in both axis and axes. + assert_raises(TypeError, np.vecdot, a, b, axis=0, axes=[0, 0]) + # Not an integer. + assert_raises(TypeError, np.vecdot, a, b, axis=[0]) + # more than 1 core dimensions. + mm = umt.matrix_multiply + assert_raises(TypeError, mm, a, b, axis=1) + # Output wrong size in axis. + out = np.empty((1, 2, 3), dtype=a.dtype) + assert_raises(ValueError, umt.cumsum, a, out=out, axis=0) + # Regular ufuncs should not accept axis. + assert_raises(TypeError, np.add, 1., 1., axis=0) + + def test_keepdims_argument(self): + # vecdot signature: '(n),(n)->()' + a = np.arange(27.).reshape((3, 3, 3)) + b = np.arange(10., 19.).reshape((3, 1, 3)) + c = np.vecdot(a, b) + assert_array_equal(c, (a * b).sum(-1)) + c = np.vecdot(a, b, keepdims=False) + assert_array_equal(c, (a * b).sum(-1)) + c = np.vecdot(a, b, keepdims=True) + assert_array_equal(c, (a * b).sum(-1, keepdims=True)) + out = np.zeros_like(c) + d = np.vecdot(a, b, keepdims=True, out=out) + assert_(d is out) + assert_array_equal(d, c) + # Now combined with axis and axes. + c = np.vecdot(a, b, axis=-1, keepdims=False) + assert_array_equal(c, (a * b).sum(-1, keepdims=False)) + c = np.vecdot(a, b, axis=-1, keepdims=True) + assert_array_equal(c, (a * b).sum(-1, keepdims=True)) + c = np.vecdot(a, b, axis=0, keepdims=False) + assert_array_equal(c, (a * b).sum(0, keepdims=False)) + c = np.vecdot(a, b, axis=0, keepdims=True) + assert_array_equal(c, (a * b).sum(0, keepdims=True)) + c = np.vecdot(a, b, axes=[(-1,), (-1,), ()], keepdims=False) + assert_array_equal(c, (a * b).sum(-1)) + c = np.vecdot(a, b, axes=[(-1,), (-1,), (-1,)], keepdims=True) + assert_array_equal(c, (a * b).sum(-1, keepdims=True)) + c = np.vecdot(a, b, axes=[0, 0], keepdims=False) + assert_array_equal(c, (a * b).sum(0)) + c = np.vecdot(a, b, axes=[0, 0, 0], keepdims=True) + assert_array_equal(c, (a * b).sum(0, keepdims=True)) + c = np.vecdot(a, b, axes=[0, 2], keepdims=False) + assert_array_equal(c, (a.transpose(1, 2, 0) * b).sum(-1)) + c = np.vecdot(a, b, axes=[0, 2], keepdims=True) + assert_array_equal(c, (a.transpose(1, 2, 0) * b).sum(-1, + keepdims=True)) + c = np.vecdot(a, b, axes=[0, 2, 2], keepdims=True) + assert_array_equal(c, (a.transpose(1, 2, 0) * b).sum(-1, + keepdims=True)) + c = np.vecdot(a, b, axes=[0, 2, 0], keepdims=True) + assert_array_equal(c, (a * b.transpose(2, 0, 1)).sum(0, keepdims=True)) + # Hardly useful, but should work. + c = np.vecdot(a, b, axes=[0, 2, 1], keepdims=True) + assert_array_equal(c, (a.transpose(1, 0, 2) * b.transpose(0, 2, 1)) + .sum(1, keepdims=True)) + # Check with two core dimensions. + a = np.eye(3) * np.arange(4.)[:, np.newaxis, np.newaxis] + expected = uml.det(a) + c = uml.det(a, keepdims=False) + assert_array_equal(c, expected) + c = uml.det(a, keepdims=True) + assert_array_equal(c, expected[:, np.newaxis, np.newaxis]) + a = np.eye(3) * np.arange(4.)[:, np.newaxis, np.newaxis] + expected_s, expected_l = uml.slogdet(a) + cs, cl = uml.slogdet(a, keepdims=False) + assert_array_equal(cs, expected_s) + assert_array_equal(cl, expected_l) + cs, cl = uml.slogdet(a, keepdims=True) + assert_array_equal(cs, expected_s[:, np.newaxis, np.newaxis]) + assert_array_equal(cl, expected_l[:, np.newaxis, np.newaxis]) + # Sanity check on innerwt. + a = np.arange(6).reshape((2, 3)) + b = np.arange(10, 16).reshape((2, 3)) + w = np.arange(20, 26).reshape((2, 3)) + assert_array_equal(umt.innerwt(a, b, w, keepdims=True), + np.sum(a * b * w, axis=-1, keepdims=True)) + assert_array_equal(umt.innerwt(a, b, w, axis=0, keepdims=True), + np.sum(a * b * w, axis=0, keepdims=True)) + # Check errors. + # Not a boolean + assert_raises(TypeError, np.vecdot, a, b, keepdims='true') + # More than 1 core dimension, and core output dimensions. + mm = umt.matrix_multiply + assert_raises(TypeError, mm, a, b, keepdims=True) + assert_raises(TypeError, mm, a, b, keepdims=False) + # Regular ufuncs should not accept keepdims. + assert_raises(TypeError, np.add, 1., 1., keepdims=False) + + def test_innerwt(self): + a = np.arange(6).reshape((2, 3)) + b = np.arange(10, 16).reshape((2, 3)) + w = np.arange(20, 26).reshape((2, 3)) + assert_array_equal(umt.innerwt(a, b, w), np.sum(a*b*w, axis=-1)) + a = np.arange(100, 124).reshape((2, 3, 4)) + b = np.arange(200, 224).reshape((2, 3, 4)) + w = np.arange(300, 324).reshape((2, 3, 4)) + assert_array_equal(umt.innerwt(a, b, w), np.sum(a*b*w, axis=-1)) + + def test_innerwt_empty(self): + """Test generalized ufunc with zero-sized operands""" + a = np.array([], dtype='f8') + b = np.array([], dtype='f8') + w = np.array([], dtype='f8') + assert_array_equal(umt.innerwt(a, b, w), np.sum(a*b*w, axis=-1)) + + def test_cross1d(self): + """Test with fixed-sized signature.""" + a = np.eye(3) + assert_array_equal(umt.cross1d(a, a), np.zeros((3, 3))) + out = np.zeros((3, 3)) + result = umt.cross1d(a[0], a, out) + assert_(result is out) + assert_array_equal(result, np.vstack((np.zeros(3), a[2], -a[1]))) + assert_raises(ValueError, umt.cross1d, np.eye(4), np.eye(4)) + assert_raises(ValueError, umt.cross1d, a, np.arange(4.)) + # Wrong output core dimension. + assert_raises(ValueError, umt.cross1d, a, np.arange(3.), np.zeros((3, 4))) + # Wrong output broadcast dimension (see gh-15139). + assert_raises(ValueError, umt.cross1d, a, np.arange(3.), np.zeros(3)) + + def test_can_ignore_signature(self): + # Comparing the effects of ? in signature: + # matrix_multiply: (m,n),(n,p)->(m,p) # all must be there. + # matmul: (m?,n),(n,p?)->(m?,p?) # allow missing m, p. + mat = np.arange(12).reshape((2, 3, 2)) + single_vec = np.arange(2) + col_vec = single_vec[:, np.newaxis] + col_vec_array = np.arange(8).reshape((2, 2, 2, 1)) + 1 + # matrix @ single column vector with proper dimension + mm_col_vec = umt.matrix_multiply(mat, col_vec) + # matmul does the same thing + matmul_col_vec = umt.matmul(mat, col_vec) + assert_array_equal(matmul_col_vec, mm_col_vec) + # matrix @ vector without dimension making it a column vector. + # matrix multiply fails -> missing core dim. + assert_raises(ValueError, umt.matrix_multiply, mat, single_vec) + # matmul mimicker passes, and returns a vector. + matmul_col = umt.matmul(mat, single_vec) + assert_array_equal(matmul_col, mm_col_vec.squeeze()) + # Now with a column array: same as for column vector, + # broadcasting sensibly. + mm_col_vec = umt.matrix_multiply(mat, col_vec_array) + matmul_col_vec = umt.matmul(mat, col_vec_array) + assert_array_equal(matmul_col_vec, mm_col_vec) + # As above, but for row vector + single_vec = np.arange(3) + row_vec = single_vec[np.newaxis, :] + row_vec_array = np.arange(24).reshape((4, 2, 1, 1, 3)) + 1 + # row vector @ matrix + mm_row_vec = umt.matrix_multiply(row_vec, mat) + matmul_row_vec = umt.matmul(row_vec, mat) + assert_array_equal(matmul_row_vec, mm_row_vec) + # single row vector @ matrix + assert_raises(ValueError, umt.matrix_multiply, single_vec, mat) + matmul_row = umt.matmul(single_vec, mat) + assert_array_equal(matmul_row, mm_row_vec.squeeze()) + # row vector array @ matrix + mm_row_vec = umt.matrix_multiply(row_vec_array, mat) + matmul_row_vec = umt.matmul(row_vec_array, mat) + assert_array_equal(matmul_row_vec, mm_row_vec) + # Now for vector combinations + # row vector @ column vector + col_vec = row_vec.T + col_vec_array = row_vec_array.swapaxes(-2, -1) + mm_row_col_vec = umt.matrix_multiply(row_vec, col_vec) + matmul_row_col_vec = umt.matmul(row_vec, col_vec) + assert_array_equal(matmul_row_col_vec, mm_row_col_vec) + # single row vector @ single col vector + assert_raises(ValueError, umt.matrix_multiply, single_vec, single_vec) + matmul_row_col = umt.matmul(single_vec, single_vec) + assert_array_equal(matmul_row_col, mm_row_col_vec.squeeze()) + # row vector array @ matrix + mm_row_col_array = umt.matrix_multiply(row_vec_array, col_vec_array) + matmul_row_col_array = umt.matmul(row_vec_array, col_vec_array) + assert_array_equal(matmul_row_col_array, mm_row_col_array) + # Finally, check that things are *not* squeezed if one gives an + # output. + out = np.zeros_like(mm_row_col_array) + out = umt.matrix_multiply(row_vec_array, col_vec_array, out=out) + assert_array_equal(out, mm_row_col_array) + out[:] = 0 + out = umt.matmul(row_vec_array, col_vec_array, out=out) + assert_array_equal(out, mm_row_col_array) + # And check one cannot put missing dimensions back. + out = np.zeros_like(mm_row_col_vec) + assert_raises(ValueError, umt.matrix_multiply, single_vec, single_vec, + out) + # But fine for matmul, since it is just a broadcast. + out = umt.matmul(single_vec, single_vec, out) + assert_array_equal(out, mm_row_col_vec.squeeze()) + + def test_matrix_multiply(self): + self.compare_matrix_multiply_results(np.int64) + self.compare_matrix_multiply_results(np.double) + + def test_matrix_multiply_umath_empty(self): + res = umt.matrix_multiply(np.ones((0, 10)), np.ones((10, 0))) + assert_array_equal(res, np.zeros((0, 0))) + res = umt.matrix_multiply(np.ones((10, 0)), np.ones((0, 10))) + assert_array_equal(res, np.zeros((10, 10))) + + def compare_matrix_multiply_results(self, tp): + d1 = np.array(np.random.rand(2, 3, 4), dtype=tp) + d2 = np.array(np.random.rand(2, 3, 4), dtype=tp) + msg = "matrix multiply on type %s" % d1.dtype.name + + def permute_n(n): + if n == 1: + return ([0],) + ret = () + base = permute_n(n-1) + for perm in base: + for i in range(n): + new = perm + [n-1] + new[n-1] = new[i] + new[i] = n-1 + ret += (new,) + return ret + + def slice_n(n): + if n == 0: + return ((),) + ret = () + base = slice_n(n-1) + for sl in base: + ret += (sl+(slice(None),),) + ret += (sl+(slice(0, 1),),) + return ret + + def broadcastable(s1, s2): + return s1 == s2 or s1 == 1 or s2 == 1 + + permute_3 = permute_n(3) + slice_3 = slice_n(3) + ((slice(None, None, -1),)*3,) + + ref = True + for p1 in permute_3: + for p2 in permute_3: + for s1 in slice_3: + for s2 in slice_3: + a1 = d1.transpose(p1)[s1] + a2 = d2.transpose(p2)[s2] + ref = ref and a1.base is not None + ref = ref and a2.base is not None + if (a1.shape[-1] == a2.shape[-2] and + broadcastable(a1.shape[0], a2.shape[0])): + assert_array_almost_equal( + umt.matrix_multiply(a1, a2), + np.sum(a2[..., np.newaxis].swapaxes(-3, -1) * + a1[..., np.newaxis,:], axis=-1), + err_msg=msg + ' %s %s' % (str(a1.shape), + str(a2.shape))) + + assert_equal(ref, True, err_msg="reference check") + + def test_euclidean_pdist(self): + a = np.arange(12, dtype=float).reshape(4, 3) + out = np.empty((a.shape[0] * (a.shape[0] - 1) // 2,), dtype=a.dtype) + umt.euclidean_pdist(a, out) + b = np.sqrt(np.sum((a[:, None] - a)**2, axis=-1)) + b = b[~np.tri(a.shape[0], dtype=bool)] + assert_almost_equal(out, b) + # An output array is required to determine p with signature (n,d)->(p) + assert_raises(ValueError, umt.euclidean_pdist, a) + + def test_cumsum(self): + a = np.arange(10) + result = umt.cumsum(a) + assert_array_equal(result, a.cumsum()) + + def test_object_logical(self): + a = np.array([3, None, True, False, "test", ""], dtype=object) + assert_equal(np.logical_or(a, None), + np.array([x or None for x in a], dtype=object)) + assert_equal(np.logical_or(a, True), + np.array([x or True for x in a], dtype=object)) + assert_equal(np.logical_or(a, 12), + np.array([x or 12 for x in a], dtype=object)) + assert_equal(np.logical_or(a, "blah"), + np.array([x or "blah" for x in a], dtype=object)) + + assert_equal(np.logical_and(a, None), + np.array([x and None for x in a], dtype=object)) + assert_equal(np.logical_and(a, True), + np.array([x and True for x in a], dtype=object)) + assert_equal(np.logical_and(a, 12), + np.array([x and 12 for x in a], dtype=object)) + assert_equal(np.logical_and(a, "blah"), + np.array([x and "blah" for x in a], dtype=object)) + + assert_equal(np.logical_not(a), + np.array([not x for x in a], dtype=object)) + + assert_equal(np.logical_or.reduce(a), 3) + assert_equal(np.logical_and.reduce(a), None) + + def test_object_comparison(self): + class HasComparisons: + def __eq__(self, other): + return '==' + + arr0d = np.array(HasComparisons()) + assert_equal(arr0d == arr0d, True) + assert_equal(np.equal(arr0d, arr0d), True) # normal behavior is a cast + + arr1d = np.array([HasComparisons()]) + assert_equal(arr1d == arr1d, np.array([True])) + assert_equal(np.equal(arr1d, arr1d), np.array([True])) # normal behavior is a cast + assert_equal(np.equal(arr1d, arr1d, dtype=object), np.array(['=='])) + + def test_object_array_reduction(self): + # Reductions on object arrays + a = np.array(['a', 'b', 'c'], dtype=object) + assert_equal(np.sum(a), 'abc') + assert_equal(np.max(a), 'c') + assert_equal(np.min(a), 'a') + a = np.array([True, False, True], dtype=object) + assert_equal(np.sum(a), 2) + assert_equal(np.prod(a), 0) + assert_equal(np.any(a), True) + assert_equal(np.all(a), False) + assert_equal(np.max(a), True) + assert_equal(np.min(a), False) + assert_equal(np.array([[1]], dtype=object).sum(), 1) + assert_equal(np.array([[[1, 2]]], dtype=object).sum((0, 1)), [1, 2]) + assert_equal(np.array([1], dtype=object).sum(initial=1), 2) + assert_equal(np.array([[1], [2, 3]], dtype=object) + .sum(initial=[0], where=[False, True]), [0, 2, 3]) + + def test_object_array_accumulate_inplace(self): + # Checks that in-place accumulates work, see also gh-7402 + arr = np.ones(4, dtype=object) + arr[:] = [[1] for i in range(4)] + # Twice reproduced also for tuples: + np.add.accumulate(arr, out=arr) + np.add.accumulate(arr, out=arr) + assert_array_equal(arr, + np.array([[1]*i for i in [1, 3, 6, 10]], dtype=object), + ) + + # And the same if the axis argument is used + arr = np.ones((2, 4), dtype=object) + arr[0, :] = [[2] for i in range(4)] + np.add.accumulate(arr, out=arr, axis=-1) + np.add.accumulate(arr, out=arr, axis=-1) + assert_array_equal(arr[0, :], + np.array([[2]*i for i in [1, 3, 6, 10]], dtype=object), + ) + + def test_object_array_accumulate_failure(self): + # Typical accumulation on object works as expected: + res = np.add.accumulate(np.array([1, 0, 2], dtype=object)) + assert_array_equal(res, np.array([1, 1, 3], dtype=object)) + # But errors are propagated from the inner-loop if they occur: + with pytest.raises(TypeError): + np.add.accumulate([1, None, 2]) + + def test_object_array_reduceat_inplace(self): + # Checks that in-place reduceats work, see also gh-7465 + arr = np.empty(4, dtype=object) + arr[:] = [[1] for i in range(4)] + out = np.empty(4, dtype=object) + out[:] = [[1] for i in range(4)] + np.add.reduceat(arr, np.arange(4), out=arr) + np.add.reduceat(arr, np.arange(4), out=arr) + assert_array_equal(arr, out) + + # And the same if the axis argument is used + arr = np.ones((2, 4), dtype=object) + arr[0, :] = [[2] for i in range(4)] + out = np.ones((2, 4), dtype=object) + out[0, :] = [[2] for i in range(4)] + np.add.reduceat(arr, np.arange(4), out=arr, axis=-1) + np.add.reduceat(arr, np.arange(4), out=arr, axis=-1) + assert_array_equal(arr, out) + + def test_object_array_reduceat_failure(self): + # Reduceat works as expected when no invalid operation occurs (None is + # not involved in an operation here) + res = np.add.reduceat(np.array([1, None, 2], dtype=object), [1, 2]) + assert_array_equal(res, np.array([None, 2], dtype=object)) + # But errors when None would be involved in an operation: + with pytest.raises(TypeError): + np.add.reduceat([1, None, 2], [0, 2]) + + def test_zerosize_reduction(self): + # Test with default dtype and object dtype + for a in [[], np.array([], dtype=object)]: + assert_equal(np.sum(a), 0) + assert_equal(np.prod(a), 1) + assert_equal(np.any(a), False) + assert_equal(np.all(a), True) + assert_raises(ValueError, np.max, a) + assert_raises(ValueError, np.min, a) + + def test_axis_out_of_bounds(self): + a = np.array([False, False]) + assert_raises(AxisError, a.all, axis=1) + a = np.array([False, False]) + assert_raises(AxisError, a.all, axis=-2) + + a = np.array([False, False]) + assert_raises(AxisError, a.any, axis=1) + a = np.array([False, False]) + assert_raises(AxisError, a.any, axis=-2) + + def test_scalar_reduction(self): + # The functions 'sum', 'prod', etc allow specifying axis=0 + # even for scalars + assert_equal(np.sum(3, axis=0), 3) + assert_equal(np.prod(3.5, axis=0), 3.5) + assert_equal(np.any(True, axis=0), True) + assert_equal(np.all(False, axis=0), False) + assert_equal(np.max(3, axis=0), 3) + assert_equal(np.min(2.5, axis=0), 2.5) + + # Check scalar behaviour for ufuncs without an identity + assert_equal(np.power.reduce(3), 3) + + # Make sure that scalars are coming out from this operation + assert_(type(np.prod(np.float32(2.5), axis=0)) is np.float32) + assert_(type(np.sum(np.float32(2.5), axis=0)) is np.float32) + assert_(type(np.max(np.float32(2.5), axis=0)) is np.float32) + assert_(type(np.min(np.float32(2.5), axis=0)) is np.float32) + + # check if scalars/0-d arrays get cast + assert_(type(np.any(0, axis=0)) is np.bool) + + # assert that 0-d arrays get wrapped + class MyArray(np.ndarray): + pass + a = np.array(1).view(MyArray) + assert_(type(np.any(a)) is MyArray) + + def test_casting_out_param(self): + # Test that it's possible to do casts on output + a = np.ones((200, 100), np.int64) + b = np.ones((200, 100), np.int64) + c = np.ones((200, 100), np.float64) + np.add(a, b, out=c) + assert_equal(c, 2) + + a = np.zeros(65536) + b = np.zeros(65536, dtype=np.float32) + np.subtract(a, 0, out=b) + assert_equal(b, 0) + + def test_where_param(self): + # Test that the where= ufunc parameter works with regular arrays + a = np.arange(7) + b = np.ones(7) + c = np.zeros(7) + np.add(a, b, out=c, where=(a % 2 == 1)) + assert_equal(c, [0, 2, 0, 4, 0, 6, 0]) + + a = np.arange(4).reshape(2, 2) + 2 + np.power(a, [2, 3], out=a, where=[[0, 1], [1, 0]]) + assert_equal(a, [[2, 27], [16, 5]]) + # Broadcasting the where= parameter + np.subtract(a, 2, out=a, where=[True, False]) + assert_equal(a, [[0, 27], [14, 5]]) + + def test_where_param_buffer_output(self): + # This test is temporarily skipped because it requires + # adding masking features to the nditer to work properly + + # With casting on output + a = np.ones(10, np.int64) + b = np.ones(10, np.int64) + c = 1.5 * np.ones(10, np.float64) + np.add(a, b, out=c, where=[1, 0, 0, 1, 0, 0, 1, 1, 1, 0]) + assert_equal(c, [2, 1.5, 1.5, 2, 1.5, 1.5, 2, 2, 2, 1.5]) + + def test_where_param_alloc(self): + # With casting and allocated output + a = np.array([1], dtype=np.int64) + m = np.array([True], dtype=bool) + assert_equal(np.sqrt(a, where=m), [1]) + + # No casting and allocated output + a = np.array([1], dtype=np.float64) + m = np.array([True], dtype=bool) + assert_equal(np.sqrt(a, where=m), [1]) + + def test_where_with_broadcasting(self): + # See gh-17198 + a = np.random.random((5000, 4)) + b = np.random.random((5000, 1)) + + where = a > 0.3 + out = np.full_like(a, 0) + np.less(a, b, where=where, out=out) + b_where = np.broadcast_to(b, a.shape)[where] + assert_array_equal((a[where] < b_where), out[where].astype(bool)) + assert not out[~where].any() # outside mask, out remains all 0 + + def check_identityless_reduction(self, a): + # np.minimum.reduce is an identityless reduction + + # Verify that it sees the zero at various positions + a[...] = 1 + a[1, 0, 0] = 0 + assert_equal(np.minimum.reduce(a, axis=None), 0) + assert_equal(np.minimum.reduce(a, axis=(0, 1)), [0, 1, 1, 1]) + assert_equal(np.minimum.reduce(a, axis=(0, 2)), [0, 1, 1]) + assert_equal(np.minimum.reduce(a, axis=(1, 2)), [1, 0]) + assert_equal(np.minimum.reduce(a, axis=0), + [[0, 1, 1, 1], [1, 1, 1, 1], [1, 1, 1, 1]]) + assert_equal(np.minimum.reduce(a, axis=1), + [[1, 1, 1, 1], [0, 1, 1, 1]]) + assert_equal(np.minimum.reduce(a, axis=2), + [[1, 1, 1], [0, 1, 1]]) + assert_equal(np.minimum.reduce(a, axis=()), a) + + a[...] = 1 + a[0, 1, 0] = 0 + assert_equal(np.minimum.reduce(a, axis=None), 0) + assert_equal(np.minimum.reduce(a, axis=(0, 1)), [0, 1, 1, 1]) + assert_equal(np.minimum.reduce(a, axis=(0, 2)), [1, 0, 1]) + assert_equal(np.minimum.reduce(a, axis=(1, 2)), [0, 1]) + assert_equal(np.minimum.reduce(a, axis=0), + [[1, 1, 1, 1], [0, 1, 1, 1], [1, 1, 1, 1]]) + assert_equal(np.minimum.reduce(a, axis=1), + [[0, 1, 1, 1], [1, 1, 1, 1]]) + assert_equal(np.minimum.reduce(a, axis=2), + [[1, 0, 1], [1, 1, 1]]) + assert_equal(np.minimum.reduce(a, axis=()), a) + + a[...] = 1 + a[0, 0, 1] = 0 + assert_equal(np.minimum.reduce(a, axis=None), 0) + assert_equal(np.minimum.reduce(a, axis=(0, 1)), [1, 0, 1, 1]) + assert_equal(np.minimum.reduce(a, axis=(0, 2)), [0, 1, 1]) + assert_equal(np.minimum.reduce(a, axis=(1, 2)), [0, 1]) + assert_equal(np.minimum.reduce(a, axis=0), + [[1, 0, 1, 1], [1, 1, 1, 1], [1, 1, 1, 1]]) + assert_equal(np.minimum.reduce(a, axis=1), + [[1, 0, 1, 1], [1, 1, 1, 1]]) + assert_equal(np.minimum.reduce(a, axis=2), + [[0, 1, 1], [1, 1, 1]]) + assert_equal(np.minimum.reduce(a, axis=()), a) + + @requires_memory(6 * 1024**3) + @pytest.mark.skipif(sys.maxsize < 2**32, + reason="test array too large for 32bit platform") + def test_identityless_reduction_huge_array(self): + # Regression test for gh-20921 (copying identity incorrectly failed) + arr = np.zeros((2, 2**31), 'uint8') + arr[:, 0] = [1, 3] + arr[:, -1] = [4, 1] + res = np.maximum.reduce(arr, axis=0) + del arr + assert res[0] == 3 + assert res[-1] == 4 + + def test_identityless_reduction_corder(self): + a = np.empty((2, 3, 4), order='C') + self.check_identityless_reduction(a) + + def test_identityless_reduction_forder(self): + a = np.empty((2, 3, 4), order='F') + self.check_identityless_reduction(a) + + def test_identityless_reduction_otherorder(self): + a = np.empty((2, 4, 3), order='C').swapaxes(1, 2) + self.check_identityless_reduction(a) + + def test_identityless_reduction_noncontig(self): + a = np.empty((3, 5, 4), order='C').swapaxes(1, 2) + a = a[1:, 1:, 1:] + self.check_identityless_reduction(a) + + def test_identityless_reduction_noncontig_unaligned(self): + a = np.empty((3*4*5*8 + 1,), dtype='i1') + a = a[1:].view(dtype='f8') + a.shape = (3, 4, 5) + a = a[1:, 1:, 1:] + self.check_identityless_reduction(a) + + def test_reduce_identity_depends_on_loop(self): + """ + The type of the result should always depend on the selected loop, not + necessarily the output (only relevant for object arrays). + """ + # For an object loop, the default value 0 with type int is used: + assert type(np.add.reduce([], dtype=object)) is int + out = np.array(None, dtype=object) + # When the loop is float64 but `out` is object this does not happen, + # the result is float64 cast to object (which gives Python `float`). + np.add.reduce([], out=out, dtype=np.float64) + assert type(out[()]) is float + + def test_initial_reduction(self): + # np.minimum.reduce is an identityless reduction + + # For cases like np.maximum(np.abs(...), initial=0) + # More generally, a supremum over non-negative numbers. + assert_equal(np.maximum.reduce([], initial=0), 0) + + # For cases like reduction of an empty array over the reals. + assert_equal(np.minimum.reduce([], initial=np.inf), np.inf) + assert_equal(np.maximum.reduce([], initial=-np.inf), -np.inf) + + # Random tests + assert_equal(np.minimum.reduce([5], initial=4), 4) + assert_equal(np.maximum.reduce([4], initial=5), 5) + assert_equal(np.maximum.reduce([5], initial=4), 5) + assert_equal(np.minimum.reduce([4], initial=5), 4) + + # Check initial=None raises ValueError for both types of ufunc reductions + assert_raises(ValueError, np.minimum.reduce, [], initial=None) + assert_raises(ValueError, np.add.reduce, [], initial=None) + # Also in the somewhat special object case: + with pytest.raises(ValueError): + np.add.reduce([], initial=None, dtype=object) + + # Check that np._NoValue gives default behavior. + assert_equal(np.add.reduce([], initial=np._NoValue), 0) + + # Check that initial kwarg behaves as intended for dtype=object + a = np.array([10], dtype=object) + res = np.add.reduce(a, initial=5) + assert_equal(res, 15) + + def test_empty_reduction_and_identity(self): + arr = np.zeros((0, 5)) + # OK, since the reduction itself is *not* empty, the result is + assert np.true_divide.reduce(arr, axis=1).shape == (0,) + # Not OK, the reduction itself is empty and we have no identity + with pytest.raises(ValueError): + np.true_divide.reduce(arr, axis=0) + + # Test that an empty reduction fails also if the result is empty + arr = np.zeros((0, 0, 5)) + with pytest.raises(ValueError): + np.true_divide.reduce(arr, axis=1) + + # Division reduction makes sense with `initial=1` (empty or not): + res = np.true_divide.reduce(arr, axis=1, initial=1) + assert_array_equal(res, np.ones((0, 5))) + + @pytest.mark.parametrize('axis', (0, 1, None)) + @pytest.mark.parametrize('where', (np.array([False, True, True]), + np.array([[True], [False], [True]]), + np.array([[True, False, False], + [False, True, False], + [False, True, True]]))) + def test_reduction_with_where(self, axis, where): + a = np.arange(9.).reshape(3, 3) + a_copy = a.copy() + a_check = np.zeros_like(a) + np.positive(a, out=a_check, where=where) + + res = np.add.reduce(a, axis=axis, where=where) + check = a_check.sum(axis) + assert_equal(res, check) + # Check we do not overwrite elements of a internally. + assert_array_equal(a, a_copy) + + @pytest.mark.parametrize(('axis', 'where'), + ((0, np.array([True, False, True])), + (1, [True, True, False]), + (None, True))) + @pytest.mark.parametrize('initial', (-np.inf, 5.)) + def test_reduction_with_where_and_initial(self, axis, where, initial): + a = np.arange(9.).reshape(3, 3) + a_copy = a.copy() + a_check = np.full(a.shape, -np.inf) + np.positive(a, out=a_check, where=where) + + res = np.maximum.reduce(a, axis=axis, where=where, initial=initial) + check = a_check.max(axis, initial=initial) + assert_equal(res, check) + + def test_reduction_where_initial_needed(self): + a = np.arange(9.).reshape(3, 3) + m = [False, True, False] + assert_raises(ValueError, np.maximum.reduce, a, where=m) + + def test_identityless_reduction_nonreorderable(self): + a = np.array([[8.0, 2.0, 2.0], [1.0, 0.5, 0.25]]) + + res = np.divide.reduce(a, axis=0) + assert_equal(res, [8.0, 4.0, 8.0]) + + res = np.divide.reduce(a, axis=1) + assert_equal(res, [2.0, 8.0]) + + res = np.divide.reduce(a, axis=()) + assert_equal(res, a) + + assert_raises(ValueError, np.divide.reduce, a, axis=(0, 1)) + + def test_reduce_zero_axis(self): + # If we have a n x m array and do a reduction with axis=1, then we are + # doing n reductions, and each reduction takes an m-element array. For + # a reduction operation without an identity, then: + # n > 0, m > 0: fine + # n = 0, m > 0: fine, doing 0 reductions of m-element arrays + # n > 0, m = 0: can't reduce a 0-element array, ValueError + # n = 0, m = 0: can't reduce a 0-element array, ValueError (for + # consistency with the above case) + # This test doesn't actually look at return values, it just checks to + # make sure that error we get an error in exactly those cases where we + # expect one, and assumes the calculations themselves are done + # correctly. + + def ok(f, *args, **kwargs): + f(*args, **kwargs) + + def err(f, *args, **kwargs): + assert_raises(ValueError, f, *args, **kwargs) + + def t(expect, func, n, m): + expect(func, np.zeros((n, m)), axis=1) + expect(func, np.zeros((m, n)), axis=0) + expect(func, np.zeros((n // 2, n // 2, m)), axis=2) + expect(func, np.zeros((n // 2, m, n // 2)), axis=1) + expect(func, np.zeros((n, m // 2, m // 2)), axis=(1, 2)) + expect(func, np.zeros((m // 2, n, m // 2)), axis=(0, 2)) + expect(func, np.zeros((m // 3, m // 3, m // 3, + n // 2, n // 2)), + axis=(0, 1, 2)) + # Check what happens if the inner (resp. outer) dimensions are a + # mix of zero and non-zero: + expect(func, np.zeros((10, m, n)), axis=(0, 1)) + expect(func, np.zeros((10, n, m)), axis=(0, 2)) + expect(func, np.zeros((m, 10, n)), axis=0) + expect(func, np.zeros((10, m, n)), axis=1) + expect(func, np.zeros((10, n, m)), axis=2) + + # np.maximum is just an arbitrary ufunc with no reduction identity + assert_equal(np.maximum.identity, None) + t(ok, np.maximum.reduce, 30, 30) + t(ok, np.maximum.reduce, 0, 30) + t(err, np.maximum.reduce, 30, 0) + t(err, np.maximum.reduce, 0, 0) + err(np.maximum.reduce, []) + np.maximum.reduce(np.zeros((0, 0)), axis=()) + + # all of the combinations are fine for a reduction that has an + # identity + t(ok, np.add.reduce, 30, 30) + t(ok, np.add.reduce, 0, 30) + t(ok, np.add.reduce, 30, 0) + t(ok, np.add.reduce, 0, 0) + np.add.reduce([]) + np.add.reduce(np.zeros((0, 0)), axis=()) + + # OTOH, accumulate always makes sense for any combination of n and m, + # because it maps an m-element array to an m-element array. These + # tests are simpler because accumulate doesn't accept multiple axes. + for uf in (np.maximum, np.add): + uf.accumulate(np.zeros((30, 0)), axis=0) + uf.accumulate(np.zeros((0, 30)), axis=0) + uf.accumulate(np.zeros((30, 30)), axis=0) + uf.accumulate(np.zeros((0, 0)), axis=0) + + def test_safe_casting(self): + # In old versions of numpy, in-place operations used the 'unsafe' + # casting rules. In versions >= 1.10, 'same_kind' is the + # default and an exception is raised instead of a warning. + # when 'same_kind' is not satisfied. + a = np.array([1, 2, 3], dtype=int) + # Non-in-place addition is fine + assert_array_equal(assert_no_warnings(np.add, a, 1.1), + [2.1, 3.1, 4.1]) + assert_raises(TypeError, np.add, a, 1.1, out=a) + + def add_inplace(a, b): + a += b + + assert_raises(TypeError, add_inplace, a, 1.1) + # Make sure that explicitly overriding the exception is allowed: + assert_no_warnings(np.add, a, 1.1, out=a, casting="unsafe") + assert_array_equal(a, [2, 3, 4]) + + def test_ufunc_custom_out(self): + # Test ufunc with built in input types and custom output type + + a = np.array([0, 1, 2], dtype='i8') + b = np.array([0, 1, 2], dtype='i8') + c = np.empty(3, dtype=_rational_tests.rational) + + # Output must be specified so numpy knows what + # ufunc signature to look for + result = _rational_tests.test_add(a, b, c) + target = np.array([0, 2, 4], dtype=_rational_tests.rational) + assert_equal(result, target) + + # The new resolution means that we can (usually) find custom loops + # as long as they match exactly: + result = _rational_tests.test_add(a, b) + assert_equal(result, target) + + # This works even more generally, so long the default common-dtype + # promoter works out: + result = _rational_tests.test_add(a, b.astype(np.uint16), out=c) + assert_equal(result, target) + + # This scalar path used to go into legacy promotion, but doesn't now: + result = _rational_tests.test_add(a, np.uint16(2)) + target = np.array([2, 3, 4], dtype=_rational_tests.rational) + assert_equal(result, target) + + def test_operand_flags(self): + a = np.arange(16, dtype=int).reshape(4, 4) + b = np.arange(9, dtype=int).reshape(3, 3) + opflag_tests.inplace_add(a[:-1, :-1], b) + assert_equal(a, np.array([[0, 2, 4, 3], [7, 9, 11, 7], + [14, 16, 18, 11], [12, 13, 14, 15]])) + + a = np.array(0) + opflag_tests.inplace_add(a, 3) + assert_equal(a, 3) + opflag_tests.inplace_add(a, [3, 4]) + assert_equal(a, 10) + + def test_struct_ufunc(self): + import numpy._core._struct_ufunc_tests as struct_ufunc + + a = np.array([(1, 2, 3)], dtype='u8,u8,u8') + b = np.array([(1, 2, 3)], dtype='u8,u8,u8') + + result = struct_ufunc.add_triplet(a, b) + assert_equal(result, np.array([(2, 4, 6)], dtype='u8,u8,u8')) + assert_raises(RuntimeError, struct_ufunc.register_fail) + + def test_custom_ufunc(self): + a = np.array( + [_rational_tests.rational(1, 2), + _rational_tests.rational(1, 3), + _rational_tests.rational(1, 4)], + dtype=_rational_tests.rational) + b = np.array( + [_rational_tests.rational(1, 2), + _rational_tests.rational(1, 3), + _rational_tests.rational(1, 4)], + dtype=_rational_tests.rational) + + result = _rational_tests.test_add_rationals(a, b) + expected = np.array( + [_rational_tests.rational(1), + _rational_tests.rational(2, 3), + _rational_tests.rational(1, 2)], + dtype=_rational_tests.rational) + assert_equal(result, expected) + + def test_custom_ufunc_forced_sig(self): + # gh-9351 - looking for a non-first userloop would previously hang + with assert_raises(TypeError): + np.multiply(_rational_tests.rational(1), 1, + signature=(_rational_tests.rational, int, None)) + + def test_custom_array_like(self): + + class MyThing: + __array_priority__ = 1000 + + rmul_count = 0 + getitem_count = 0 + + def __init__(self, shape): + self.shape = shape + + def __len__(self): + return self.shape[0] + + def __getitem__(self, i): + MyThing.getitem_count += 1 + if not isinstance(i, tuple): + i = (i,) + if len(i) > self.ndim: + raise IndexError("boo") + + return MyThing(self.shape[len(i):]) + + def __rmul__(self, other): + MyThing.rmul_count += 1 + return self + + np.float64(5)*MyThing((3, 3)) + assert_(MyThing.rmul_count == 1, MyThing.rmul_count) + assert_(MyThing.getitem_count <= 2, MyThing.getitem_count) + + @pytest.mark.parametrize("a", ( + np.arange(10, dtype=int), + np.arange(10, dtype=_rational_tests.rational), + )) + def test_ufunc_at_basic(self, a): + + aa = a.copy() + np.add.at(aa, [2, 5, 2], 1) + assert_equal(aa, [0, 1, 4, 3, 4, 6, 6, 7, 8, 9]) + + with pytest.raises(ValueError): + # missing second operand + np.add.at(aa, [2, 5, 3]) + + aa = a.copy() + np.negative.at(aa, [2, 5, 3]) + assert_equal(aa, [0, 1, -2, -3, 4, -5, 6, 7, 8, 9]) + + aa = a.copy() + b = np.array([100, 100, 100]) + np.add.at(aa, [2, 5, 2], b) + assert_equal(aa, [0, 1, 202, 3, 4, 105, 6, 7, 8, 9]) + + with pytest.raises(ValueError): + # extraneous second operand + np.negative.at(a, [2, 5, 3], [1, 2, 3]) + + with pytest.raises(ValueError): + # second operand cannot be converted to an array + np.add.at(a, [2, 5, 3], [[1, 2], 1]) + + # ufuncs with indexed loops for performance in ufunc.at + indexed_ufuncs = [np.add, np.subtract, np.multiply, np.floor_divide, + np.maximum, np.minimum, np.fmax, np.fmin] + + @pytest.mark.parametrize( + "typecode", np.typecodes['AllInteger'] + np.typecodes['Float']) + @pytest.mark.parametrize("ufunc", indexed_ufuncs) + def test_ufunc_at_inner_loops(self, typecode, ufunc): + if ufunc is np.divide and typecode in np.typecodes['AllInteger']: + # Avoid divide-by-zero and inf for integer divide + a = np.ones(100, dtype=typecode) + indx = np.random.randint(100, size=30, dtype=np.intp) + vals = np.arange(1, 31, dtype=typecode) + else: + a = np.ones(1000, dtype=typecode) + indx = np.random.randint(1000, size=3000, dtype=np.intp) + vals = np.arange(3000, dtype=typecode) + atag = a.copy() + # Do the calculation twice and compare the answers + with warnings.catch_warnings(record=True) as w_at: + warnings.simplefilter('always') + ufunc.at(a, indx, vals) + with warnings.catch_warnings(record=True) as w_loop: + warnings.simplefilter('always') + for i, v in zip(indx, vals): + # Make sure all the work happens inside the ufunc + # in order to duplicate error/warning handling + ufunc(atag[i], v, out=atag[i:i+1], casting="unsafe") + assert_equal(atag, a) + # If w_loop warned, make sure w_at warned as well + if len(w_loop) > 0: + # + assert len(w_at) > 0 + assert w_at[0].category == w_loop[0].category + assert str(w_at[0].message)[:10] == str(w_loop[0].message)[:10] + + @pytest.mark.parametrize("typecode", np.typecodes['Complex']) + @pytest.mark.parametrize("ufunc", [np.add, np.subtract, np.multiply]) + def test_ufunc_at_inner_loops_complex(self, typecode, ufunc): + a = np.ones(10, dtype=typecode) + indx = np.concatenate([np.ones(6, dtype=np.intp), + np.full(18, 4, dtype=np.intp)]) + value = a.dtype.type(1j) + ufunc.at(a, indx, value) + expected = np.ones_like(a) + if ufunc is np.multiply: + expected[1] = expected[4] = -1 + else: + expected[1] += 6 * (value if ufunc is np.add else -value) + expected[4] += 18 * (value if ufunc is np.add else -value) + + assert_array_equal(a, expected) + + def test_ufunc_at_ellipsis(self): + # Make sure the indexed loop check does not choke on iters + # with subspaces + arr = np.zeros(5) + np.add.at(arr, slice(None), np.ones(5)) + assert_array_equal(arr, np.ones(5)) + + def test_ufunc_at_negative(self): + arr = np.ones(5, dtype=np.int32) + indx = np.arange(5) + umt.indexed_negative.at(arr, indx) + # If it is [-1, -1, -1, -100, 0] then the regular strided loop was used + assert np.all(arr == [-1, -1, -1, -200, -1]) + + def test_ufunc_at_large(self): + # issue gh-23457 + indices = np.zeros(8195, dtype=np.int16) + b = np.zeros(8195, dtype=float) + b[0] = 10 + b[1] = 5 + b[8192:] = 100 + a = np.zeros(1, dtype=float) + np.add.at(a, indices, b) + assert a[0] == b.sum() + + def test_cast_index_fastpath(self): + arr = np.zeros(10) + values = np.ones(100000) + # index must be cast, which may be buffered in chunks: + index = np.zeros(len(values), dtype=np.uint8) + np.add.at(arr, index, values) + assert arr[0] == len(values) + + @pytest.mark.parametrize("value", [ + np.ones(1), np.ones(()), np.float64(1.), 1.]) + def test_ufunc_at_scalar_value_fastpath(self, value): + arr = np.zeros(1000) + # index must be cast, which may be buffered in chunks: + index = np.repeat(np.arange(1000), 2) + np.add.at(arr, index, value) + assert_array_equal(arr, np.full_like(arr, 2 * value)) + + def test_ufunc_at_multiD(self): + a = np.arange(9).reshape(3, 3) + b = np.array([[100, 100, 100], [200, 200, 200], [300, 300, 300]]) + np.add.at(a, (slice(None), [1, 2, 1]), b) + assert_equal(a, [[0, 201, 102], [3, 404, 205], [6, 607, 308]]) + + a = np.arange(27).reshape(3, 3, 3) + b = np.array([100, 200, 300]) + np.add.at(a, (slice(None), slice(None), [1, 2, 1]), b) + assert_equal(a, + [[[0, 401, 202], + [3, 404, 205], + [6, 407, 208]], + + [[9, 410, 211], + [12, 413, 214], + [15, 416, 217]], + + [[18, 419, 220], + [21, 422, 223], + [24, 425, 226]]]) + + a = np.arange(9).reshape(3, 3) + b = np.array([[100, 100, 100], [200, 200, 200], [300, 300, 300]]) + np.add.at(a, ([1, 2, 1], slice(None)), b) + assert_equal(a, [[0, 1, 2], [403, 404, 405], [206, 207, 208]]) + + a = np.arange(27).reshape(3, 3, 3) + b = np.array([100, 200, 300]) + np.add.at(a, (slice(None), [1, 2, 1], slice(None)), b) + assert_equal(a, + [[[0, 1, 2], + [203, 404, 605], + [106, 207, 308]], + + [[9, 10, 11], + [212, 413, 614], + [115, 216, 317]], + + [[18, 19, 20], + [221, 422, 623], + [124, 225, 326]]]) + + a = np.arange(9).reshape(3, 3) + b = np.array([100, 200, 300]) + np.add.at(a, (0, [1, 2, 1]), b) + assert_equal(a, [[0, 401, 202], [3, 4, 5], [6, 7, 8]]) + + a = np.arange(27).reshape(3, 3, 3) + b = np.array([100, 200, 300]) + np.add.at(a, ([1, 2, 1], 0, slice(None)), b) + assert_equal(a, + [[[0, 1, 2], + [3, 4, 5], + [6, 7, 8]], + + [[209, 410, 611], + [12, 13, 14], + [15, 16, 17]], + + [[118, 219, 320], + [21, 22, 23], + [24, 25, 26]]]) + + a = np.arange(27).reshape(3, 3, 3) + b = np.array([100, 200, 300]) + np.add.at(a, (slice(None), slice(None), slice(None)), b) + assert_equal(a, + [[[100, 201, 302], + [103, 204, 305], + [106, 207, 308]], + + [[109, 210, 311], + [112, 213, 314], + [115, 216, 317]], + + [[118, 219, 320], + [121, 222, 323], + [124, 225, 326]]]) + + def test_ufunc_at_0D(self): + a = np.array(0) + np.add.at(a, (), 1) + assert_equal(a, 1) + + assert_raises(IndexError, np.add.at, a, 0, 1) + assert_raises(IndexError, np.add.at, a, [], 1) + + def test_ufunc_at_dtypes(self): + # Test mixed dtypes + a = np.arange(10) + np.power.at(a, [1, 2, 3, 2], 3.5) + assert_equal(a, np.array([0, 1, 4414, 46, 4, 5, 6, 7, 8, 9])) + + def test_ufunc_at_boolean(self): + # Test boolean indexing and boolean ufuncs + a = np.arange(10) + index = a % 2 == 0 + np.equal.at(a, index, [0, 2, 4, 6, 8]) + assert_equal(a, [1, 1, 1, 3, 1, 5, 1, 7, 1, 9]) + + # Test unary operator + a = np.arange(10, dtype='u4') + np.invert.at(a, [2, 5, 2]) + assert_equal(a, [0, 1, 2, 3, 4, 5 ^ 0xffffffff, 6, 7, 8, 9]) + + def test_ufunc_at_advanced(self): + # Test empty subspace + orig = np.arange(4) + a = orig[:, None][:, 0:0] + np.add.at(a, [0, 1], 3) + assert_array_equal(orig, np.arange(4)) + + # Test with swapped byte order + index = np.array([1, 2, 1], np.dtype('i').newbyteorder()) + values = np.array([1, 2, 3, 4], np.dtype('f').newbyteorder()) + np.add.at(values, index, 3) + assert_array_equal(values, [1, 8, 6, 4]) + + # Test exception thrown + values = np.array(['a', 1], dtype=object) + assert_raises(TypeError, np.add.at, values, [0, 1], 1) + assert_array_equal(values, np.array(['a', 1], dtype=object)) + + # Test multiple output ufuncs raise error, gh-5665 + assert_raises(ValueError, np.modf.at, np.arange(10), [1]) + + # Test maximum + a = np.array([1, 2, 3]) + np.maximum.at(a, [0], 0) + assert_equal(a, np.array([1, 2, 3])) + + @pytest.mark.parametrize("dtype", + np.typecodes['AllInteger'] + np.typecodes['Float']) + @pytest.mark.parametrize("ufunc", + [np.add, np.subtract, np.divide, np.minimum, np.maximum]) + def test_at_negative_indexes(self, dtype, ufunc): + a = np.arange(0, 10).astype(dtype) + indxs = np.array([-1, 1, -1, 2]).astype(np.intp) + vals = np.array([1, 5, 2, 10], dtype=a.dtype) + + expected = a.copy() + for i, v in zip(indxs, vals): + expected[i] = ufunc(expected[i], v) + + ufunc.at(a, indxs, vals) + assert_array_equal(a, expected) + assert np.all(indxs == [-1, 1, -1, 2]) + + def test_at_not_none_signature(self): + # Test ufuncs with non-trivial signature raise a TypeError + a = np.ones((2, 2, 2)) + b = np.ones((1, 2, 2)) + assert_raises(TypeError, np.matmul.at, a, [0], b) + + a = np.array([[[1, 2], [3, 4]]]) + assert_raises(TypeError, np.linalg._umath_linalg.det.at, a, [0]) + + def test_at_no_loop_for_op(self): + # str dtype does not have a ufunc loop for np.add + arr = np.ones(10, dtype=str) + with pytest.raises(np._core._exceptions._UFuncNoLoopError): + np.add.at(arr, [0, 1], [0, 1]) + + def test_at_output_casting(self): + arr = np.array([-1]) + np.equal.at(arr, [0], [0]) + assert arr[0] == 0 + + def test_at_broadcast_failure(self): + arr = np.arange(5) + with pytest.raises(ValueError): + np.add.at(arr, [0, 1], [1, 2, 3]) + + + def test_reduce_arguments(self): + f = np.add.reduce + d = np.ones((5,2), dtype=int) + o = np.ones((2,), dtype=d.dtype) + r = o * 5 + assert_equal(f(d), r) + # a, axis=0, dtype=None, out=None, keepdims=False + assert_equal(f(d, axis=0), r) + assert_equal(f(d, 0), r) + assert_equal(f(d, 0, dtype=None), r) + assert_equal(f(d, 0, dtype='i'), r) + assert_equal(f(d, 0, 'i'), r) + assert_equal(f(d, 0, None), r) + assert_equal(f(d, 0, None, out=None), r) + assert_equal(f(d, 0, None, out=o), r) + assert_equal(f(d, 0, None, o), r) + assert_equal(f(d, 0, None, None), r) + assert_equal(f(d, 0, None, None, keepdims=False), r) + assert_equal(f(d, 0, None, None, True), r.reshape((1,) + r.shape)) + assert_equal(f(d, 0, None, None, False, 0), r) + assert_equal(f(d, 0, None, None, False, initial=0), r) + assert_equal(f(d, 0, None, None, False, 0, True), r) + assert_equal(f(d, 0, None, None, False, 0, where=True), r) + # multiple keywords + assert_equal(f(d, axis=0, dtype=None, out=None, keepdims=False), r) + assert_equal(f(d, 0, dtype=None, out=None, keepdims=False), r) + assert_equal(f(d, 0, None, out=None, keepdims=False), r) + assert_equal(f(d, 0, None, out=None, keepdims=False, initial=0, + where=True), r) + + # too little + assert_raises(TypeError, f) + # too much + assert_raises(TypeError, f, d, 0, None, None, False, 0, True, 1) + # invalid axis + assert_raises(TypeError, f, d, "invalid") + assert_raises(TypeError, f, d, axis="invalid") + assert_raises(TypeError, f, d, axis="invalid", dtype=None, + keepdims=True) + # invalid dtype + assert_raises(TypeError, f, d, 0, "invalid") + assert_raises(TypeError, f, d, dtype="invalid") + assert_raises(TypeError, f, d, dtype="invalid", out=None) + # invalid out + assert_raises(TypeError, f, d, 0, None, "invalid") + assert_raises(TypeError, f, d, out="invalid") + assert_raises(TypeError, f, d, out="invalid", dtype=None) + # keepdims boolean, no invalid value + # assert_raises(TypeError, f, d, 0, None, None, "invalid") + # assert_raises(TypeError, f, d, keepdims="invalid", axis=0, dtype=None) + # invalid mix + assert_raises(TypeError, f, d, 0, keepdims="invalid", dtype="invalid", + out=None) + + # invalid keyword + assert_raises(TypeError, f, d, axis=0, dtype=None, invalid=0) + assert_raises(TypeError, f, d, invalid=0) + assert_raises(TypeError, f, d, 0, keepdims=True, invalid="invalid", + out=None) + assert_raises(TypeError, f, d, axis=0, dtype=None, keepdims=True, + out=None, invalid=0) + assert_raises(TypeError, f, d, axis=0, dtype=None, + out=None, invalid=0) + + def test_structured_equal(self): + # https://github.com/numpy/numpy/issues/4855 + + class MyA(np.ndarray): + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + return getattr(ufunc, method)(*(input.view(np.ndarray) + for input in inputs), **kwargs) + a = np.arange(12.).reshape(4,3) + ra = a.view(dtype=('f8,f8,f8')).squeeze() + mra = ra.view(MyA) + + target = np.array([ True, False, False, False], dtype=bool) + assert_equal(np.all(target == (mra == ra[0])), True) + + def test_scalar_equal(self): + # Scalar comparisons should always work, without deprecation warnings. + # even when the ufunc fails. + a = np.array(0.) + b = np.array('a') + assert_(a != b) + assert_(b != a) + assert_(not (a == b)) + assert_(not (b == a)) + + def test_NotImplemented_not_returned(self): + # See gh-5964 and gh-2091. Some of these functions are not operator + # related and were fixed for other reasons in the past. + binary_funcs = [ + np.power, np.add, np.subtract, np.multiply, np.divide, + np.true_divide, np.floor_divide, np.bitwise_and, np.bitwise_or, + np.bitwise_xor, np.left_shift, np.right_shift, np.fmax, + np.fmin, np.fmod, np.hypot, np.logaddexp, np.logaddexp2, + np.maximum, np.minimum, np.mod, + np.greater, np.greater_equal, np.less, np.less_equal, + np.equal, np.not_equal] + + a = np.array('1') + b = 1 + c = np.array([1., 2.]) + for f in binary_funcs: + assert_raises(TypeError, f, a, b) + assert_raises(TypeError, f, c, a) + + @pytest.mark.parametrize("ufunc", + [np.logical_and, np.logical_or]) # logical_xor object loop is bad + @pytest.mark.parametrize("signature", + [(None, None, object), (object, None, None), + (None, object, None)]) + def test_logical_ufuncs_object_signatures(self, ufunc, signature): + a = np.array([True, None, False], dtype=object) + res = ufunc(a, a, signature=signature) + assert res.dtype == object + + @pytest.mark.parametrize("ufunc", + [np.logical_and, np.logical_or, np.logical_xor]) + @pytest.mark.parametrize("signature", + [(bool, None, object), (object, None, bool), + (None, object, bool)]) + def test_logical_ufuncs_mixed_object_signatures(self, ufunc, signature): + # Most mixed signatures fail (except those with bool out, e.g. `OO->?`) + a = np.array([True, None, False]) + with pytest.raises(TypeError): + ufunc(a, a, signature=signature) + + @pytest.mark.parametrize("ufunc", + [np.logical_and, np.logical_or, np.logical_xor]) + def test_logical_ufuncs_support_anything(self, ufunc): + # The logical ufuncs support even input that can't be promoted: + a = np.array(b'1', dtype="V3") + c = np.array([1., 2.]) + assert_array_equal(ufunc(a, c), ufunc([True, True], True)) + assert ufunc.reduce(a) == True + # check that the output has no effect: + out = np.zeros(2, dtype=np.int32) + expected = ufunc([True, True], True).astype(out.dtype) + assert_array_equal(ufunc(a, c, out=out), expected) + out = np.zeros((), dtype=np.int32) + assert ufunc.reduce(a, out=out) == True + # Last check, test reduction when out and a match (the complexity here + # is that the "i,i->?" may seem right, but should not match. + a = np.array([3], dtype="i") + out = np.zeros((), dtype=a.dtype) + assert ufunc.reduce(a, out=out) == 1 + + @pytest.mark.parametrize("ufunc", + [np.logical_and, np.logical_or, np.logical_xor]) + @pytest.mark.parametrize("dtype", ["S", "U"]) + @pytest.mark.parametrize("values", [["1", "hi", "0"], ["", ""]]) + def test_logical_ufuncs_supports_string(self, ufunc, dtype, values): + # note that values are either all true or all false + arr = np.array(values, dtype=dtype) + obj_arr = np.array(values, dtype=object) + res = ufunc(arr, arr) + expected = ufunc(obj_arr, obj_arr, dtype=bool) + + assert_array_equal(res, expected) + + res = ufunc.reduce(arr) + expected = ufunc.reduce(obj_arr, dtype=bool) + assert_array_equal(res, expected) + + @pytest.mark.parametrize("ufunc", + [np.logical_and, np.logical_or, np.logical_xor]) + def test_logical_ufuncs_out_cast_check(self, ufunc): + a = np.array('1') + c = np.array([1., 2.]) + out = a.copy() + with pytest.raises(TypeError): + # It would be safe, but not equiv casting: + ufunc(a, c, out=out, casting="equiv") + + def test_reducelike_byteorder_resolution(self): + # See gh-20699, byte-order changes need some extra care in the type + # resolution to make the following succeed: + arr_be = np.arange(10, dtype=">i8") + arr_le = np.arange(10, dtype="i + if 'O' in typ or '?' in typ: + continue + inp, out = typ.split('->') + args = [np.ones((3, 3), t) for t in inp] + with warnings.catch_warnings(record=True): + warnings.filterwarnings("always") + res = ufunc(*args) + if isinstance(res, tuple): + outs = tuple(out) + assert len(res) == len(outs) + for r, t in zip(res, outs): + assert r.dtype == np.dtype(t) + else: + assert res.dtype == np.dtype(out) + +@pytest.mark.parametrize('ufunc', [getattr(np, x) for x in dir(np) + if isinstance(getattr(np, x), np.ufunc)]) +@np._no_nep50_warning() +def test_ufunc_noncontiguous(ufunc): + ''' + Check that contiguous and non-contiguous calls to ufuncs + have the same results for values in range(9) + ''' + for typ in ufunc.types: + # types is a list of strings like ii->i + if any(set('O?mM') & set(typ)): + # bool, object, datetime are too irregular for this simple test + continue + inp, out = typ.split('->') + args_c = [np.empty(6, t) for t in inp] + args_n = [np.empty(18, t)[::3] for t in inp] + for a in args_c: + a.flat = range(1,7) + for a in args_n: + a.flat = range(1,7) + with warnings.catch_warnings(record=True): + warnings.filterwarnings("always") + res_c = ufunc(*args_c) + res_n = ufunc(*args_n) + if len(out) == 1: + res_c = (res_c,) + res_n = (res_n,) + for c_ar, n_ar in zip(res_c, res_n): + dt = c_ar.dtype + if np.issubdtype(dt, np.floating): + # for floating point results allow a small fuss in comparisons + # since different algorithms (libm vs. intrinsics) can be used + # for different input strides + res_eps = np.finfo(dt).eps + tol = 2*res_eps + assert_allclose(res_c, res_n, atol=tol, rtol=tol) + else: + assert_equal(c_ar, n_ar) + + +@pytest.mark.parametrize('ufunc', [np.sign, np.equal]) +def test_ufunc_warn_with_nan(ufunc): + # issue gh-15127 + # test that calling certain ufuncs with a non-standard `nan` value does not + # emit a warning + # `b` holds a 64 bit signaling nan: the most significant bit of the + # significand is zero. + b = np.array([0x7ff0000000000001], 'i8').view('f8') + assert np.isnan(b) + if ufunc.nin == 1: + ufunc(b) + elif ufunc.nin == 2: + ufunc(b, b.copy()) + else: + raise ValueError('ufunc with more than 2 inputs') + + +@pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") +def test_ufunc_out_casterrors(): + # Tests that casting errors are correctly reported and buffers are + # cleared. + # The following array can be added to itself as an object array, but + # the result cannot be cast to an integer output: + value = 123 # relies on python cache (leak-check will still find it) + arr = np.array([value] * int(ncu.BUFSIZE * 1.5) + + ["string"] + + [value] * int(1.5 * ncu.BUFSIZE), dtype=object) + out = np.ones(len(arr), dtype=np.intp) + + count = sys.getrefcount(value) + with pytest.raises(ValueError): + # Output casting failure: + np.add(arr, arr, out=out, casting="unsafe") + + assert count == sys.getrefcount(value) + # output is unchanged after the error, this shows that the iteration + # was aborted (this is not necessarily defined behaviour) + assert out[-1] == 1 + + with pytest.raises(ValueError): + # Input casting failure: + np.add(arr, arr, out=out, dtype=np.intp, casting="unsafe") + + assert count == sys.getrefcount(value) + # output is unchanged after the error, this shows that the iteration + # was aborted (this is not necessarily defined behaviour) + assert out[-1] == 1 + + +@pytest.mark.parametrize("bad_offset", [0, int(ncu.BUFSIZE * 1.5)]) +def test_ufunc_input_casterrors(bad_offset): + value = 123 + arr = np.array([value] * bad_offset + + ["string"] + + [value] * int(1.5 * ncu.BUFSIZE), dtype=object) + with pytest.raises(ValueError): + # Force cast inputs, but the buffered cast of `arr` to intp fails: + np.add(arr, arr, dtype=np.intp, casting="unsafe") + + +@pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") +@pytest.mark.parametrize("bad_offset", [0, int(ncu.BUFSIZE * 1.5)]) +def test_ufunc_input_floatingpoint_error(bad_offset): + value = 123 + arr = np.array([value] * bad_offset + + [np.nan] + + [value] * int(1.5 * ncu.BUFSIZE)) + with np.errstate(invalid="raise"), pytest.raises(FloatingPointError): + # Force cast inputs, but the buffered cast of `arr` to intp fails: + np.add(arr, arr, dtype=np.intp, casting="unsafe") + + +def test_trivial_loop_invalid_cast(): + # This tests the fast-path "invalid cast", see gh-19904. + with pytest.raises(TypeError, + match="cast ufunc 'add' input 0"): + # the void dtype definitely cannot cast to double: + np.add(np.array(1, "i,i"), 3, signature="dd->d") + + +@pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") +@pytest.mark.parametrize("offset", + [0, ncu.BUFSIZE//2, int(1.5*ncu.BUFSIZE)]) +def test_reduce_casterrors(offset): + # Test reporting of casting errors in reductions, we test various + # offsets to where the casting error will occur, since these may occur + # at different places during the reduction procedure. For example + # the first item may be special. + value = 123 # relies on python cache (leak-check will still find it) + arr = np.array([value] * offset + + ["string"] + + [value] * int(1.5 * ncu.BUFSIZE), dtype=object) + out = np.array(-1, dtype=np.intp) + + count = sys.getrefcount(value) + with pytest.raises(ValueError, match="invalid literal"): + # This is an unsafe cast, but we currently always allow that. + # Note that the double loop is picked, but the cast fails. + # `initial=None` disables the use of an identity here to test failures + # while copying the first values path (not used when identity exists). + np.add.reduce(arr, dtype=np.intp, out=out, initial=None) + assert count == sys.getrefcount(value) + # If an error occurred during casting, the operation is done at most until + # the error occurs (the result of which would be `value * offset`) and -1 + # if the error happened immediately. + # This does not define behaviour, the output is invalid and thus undefined + assert out[()] < value * offset + + +def test_object_reduce_cleanup_on_failure(): + # Test cleanup, including of the initial value (manually provided or not) + with pytest.raises(TypeError): + np.add.reduce([1, 2, None], initial=4) + + with pytest.raises(TypeError): + np.add.reduce([1, 2, None]) + + +@pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") +@pytest.mark.parametrize("method", + [np.add.accumulate, np.add.reduce, + pytest.param(lambda x: np.add.reduceat(x, [0]), id="reduceat"), + pytest.param(lambda x: np.log.at(x, [2]), id="at")]) +def test_ufunc_methods_floaterrors(method): + # adding inf and -inf (or log(-inf) creates an invalid float and warns + arr = np.array([np.inf, 0, -np.inf]) + with np.errstate(all="warn"): + with pytest.warns(RuntimeWarning, match="invalid value"): + method(arr) + + arr = np.array([np.inf, 0, -np.inf]) + with np.errstate(all="raise"): + with pytest.raises(FloatingPointError): + method(arr) + + +def _check_neg_zero(value): + if value != 0.0: + return False + if not np.signbit(value.real): + return False + if value.dtype.kind == "c": + return np.signbit(value.imag) + return True + +@pytest.mark.parametrize("dtype", np.typecodes["AllFloat"]) +def test_addition_negative_zero(dtype): + dtype = np.dtype(dtype) + if dtype.kind == "c": + neg_zero = dtype.type(complex(-0.0, -0.0)) + else: + neg_zero = dtype.type(-0.0) + + arr = np.array(neg_zero) + arr2 = np.array(neg_zero) + + assert _check_neg_zero(arr + arr2) + # In-place ops may end up on a different path (reduce path) see gh-21211 + arr += arr2 + assert _check_neg_zero(arr) + + +@pytest.mark.parametrize("dtype", np.typecodes["AllFloat"]) +@pytest.mark.parametrize("use_initial", [True, False]) +def test_addition_reduce_negative_zero(dtype, use_initial): + dtype = np.dtype(dtype) + if dtype.kind == "c": + neg_zero = dtype.type(complex(-0.0, -0.0)) + else: + neg_zero = dtype.type(-0.0) + + kwargs = {} + if use_initial: + kwargs["initial"] = neg_zero + else: + pytest.xfail("-0. propagation in sum currently requires initial") + + # Test various length, in case SIMD paths or chunking play a role. + # 150 extends beyond the pairwise blocksize; probably not important. + for i in range(0, 150): + arr = np.array([neg_zero] * i, dtype=dtype) + res = np.sum(arr, **kwargs) + if i > 0 or use_initial: + assert _check_neg_zero(res) + else: + # `sum([])` should probably be 0.0 and not -0.0 like `sum([-0.0])` + assert not np.signbit(res.real) + assert not np.signbit(res.imag) + + +@pytest.mark.parametrize(["dt1", "dt2"], + [("S", "U"), ("U", "S"), ("S", "d"), ("S", "V"), ("U", "l")]) +def test_addition_string_types(dt1, dt2): + arr1 = np.array([1234234], dtype=dt1) + arr2 = np.array([b"423"], dtype=dt2) + with pytest.raises(np._core._exceptions.UFuncTypeError) as exc: + np.add(arr1, arr2) + + +@pytest.mark.parametrize("order1,order2", + [(">", ">"), ("<", "<"), (">", "<"), ("<", ">")]) +def test_addition_unicode_inverse_byte_order(order1, order2): + element = 'abcd' + arr1 = np.array([element], dtype=f"{order1}U4") + arr2 = np.array([element], dtype=f"{order2}U4") + result = arr1 + arr2 + assert result == 2*element + + +@pytest.mark.parametrize("dtype", [np.int8, np.int16, np.int32, np.int64]) +def test_find_non_long_args(dtype): + element = 'abcd' + start = dtype(0) + end = dtype(len(element)) + arr = np.array([element]) + result = np._core.umath.find(arr, "a", start, end) + assert result.dtype == np.dtype("intp") + assert result == 0 + + +def test_find_access_past_buffer(): + # This checks that no read past the string buffer occurs in + # string_fastsearch.h. The buffer class makes sure this is checked. + # To see it in action, you can remove the checks in the buffer and + # this test will produce an 'Invalid read' if run under valgrind. + arr = np.array([b'abcd', b'ebcd']) + result = np._core.umath.find(arr, b'cde', 0, np.iinfo(np.int64).max) + assert np.all(result == -1) + + +class TestLowlevelAPIAccess: + def test_resolve_dtypes_basic(self): + # Basic test for dtype resolution: + i4 = np.dtype("i4") + f4 = np.dtype("f4") + f8 = np.dtype("f8") + + r = np.add.resolve_dtypes((i4, f4, None)) + assert r == (f8, f8, f8) + + # Signature uses the same logic to parse as ufunc (less strict) + # the following is "same-kind" casting so works: + r = np.add.resolve_dtypes(( + i4, i4, None), signature=(None, None, "f4")) + assert r == (f4, f4, f4) + + # Check NEP 50 "weak" promotion also: + r = np.add.resolve_dtypes((f4, int, None)) + assert r == (f4, f4, f4) + + with pytest.raises(TypeError): + np.add.resolve_dtypes((i4, f4, None), casting="no") + + def test_resolve_dtypes_comparison(self): + i4 = np.dtype("i4") + i8 = np.dtype("i8") + b = np.dtype("?") + r = np.equal.resolve_dtypes((i4, i8, None)) + assert r == (i8, i8, b) + + def test_weird_dtypes(self): + S0 = np.dtype("S0") + # S0 is often converted by NumPy to S1, but not here: + r = np.equal.resolve_dtypes((S0, S0, None)) + assert r == (S0, S0, np.dtype(bool)) + + # Subarray dtypes are weird and may not work fully, we preserve them + # leading to a TypeError (currently no equal loop for void/structured) + dts = np.dtype("10i") + with pytest.raises(TypeError): + np.equal.resolve_dtypes((dts, dts, None)) + + def test_resolve_dtypes_reduction(self): + i2 = np.dtype("i2") + default_int_ = np.dtype(np.int_) + # Check special addition resolution: + res = np.add.resolve_dtypes((None, i2, None), reduction=True) + assert res == (default_int_, default_int_, default_int_) + + def test_resolve_dtypes_reduction_no_output(self): + i4 = np.dtype("i4") + with pytest.raises(TypeError): + # May be allowable at some point? + np.add.resolve_dtypes((i4, i4, i4), reduction=True) + + @pytest.mark.parametrize("dtypes", [ + (np.dtype("i"), np.dtype("i")), + (None, np.dtype("i"), np.dtype("f")), + (np.dtype("i"), None, np.dtype("f")), + ("i4", "i4", None)]) + def test_resolve_dtypes_errors(self, dtypes): + with pytest.raises(TypeError): + np.add.resolve_dtypes(dtypes) + + def test_resolve_dtypes_reduction_errors(self): + i2 = np.dtype("i2") + + with pytest.raises(TypeError): + np.add.resolve_dtypes((None, i2, i2)) + + with pytest.raises(TypeError): + np.add.signature((None, None, "i4")) + + @pytest.mark.skipif(not hasattr(ct, "pythonapi"), + reason="`ctypes.pythonapi` required for capsule unpacking.") + def test_loop_access(self): + # This is a basic test for the full strided loop access + data_t = ct.c_char_p * 2 + dim_t = ct.c_ssize_t * 1 + strides_t = ct.c_ssize_t * 2 + strided_loop_t = ct.CFUNCTYPE( + ct.c_int, ct.c_void_p, data_t, dim_t, strides_t, ct.c_void_p) + + class call_info_t(ct.Structure): + _fields_ = [ + ("strided_loop", strided_loop_t), + ("context", ct.c_void_p), + ("auxdata", ct.c_void_p), + ("requires_pyapi", ct.c_byte), + ("no_floatingpoint_errors", ct.c_byte), + ] + + i4 = np.dtype("i4") + dt, call_info_obj = np.negative._resolve_dtypes_and_context((i4, i4)) + assert dt == (i4, i4) # can be used without casting + + # Fill in the rest of the information: + np.negative._get_strided_loop(call_info_obj) + + ct.pythonapi.PyCapsule_GetPointer.restype = ct.c_void_p + call_info = ct.pythonapi.PyCapsule_GetPointer( + ct.py_object(call_info_obj), + ct.c_char_p(b"numpy_1.24_ufunc_call_info")) + + call_info = ct.cast(call_info, ct.POINTER(call_info_t)).contents + + arr = np.arange(10, dtype=i4) + call_info.strided_loop( + call_info.context, + data_t(arr.ctypes.data, arr.ctypes.data), + arr.ctypes.shape, # is a C-array with 10 here + strides_t(arr.ctypes.strides[0], arr.ctypes.strides[0]), + call_info.auxdata) + + # We just directly called the negative inner-loop in-place: + assert_array_equal(arr, -np.arange(10, dtype=i4)) + + @pytest.mark.parametrize("strides", [1, (1, 2, 3), (1, "2")]) + def test__get_strided_loop_errors_bad_strides(self, strides): + i4 = np.dtype("i4") + dt, call_info = np.negative._resolve_dtypes_and_context((i4, i4)) + + with pytest.raises(TypeError, match="fixed_strides.*tuple.*or None"): + np.negative._get_strided_loop(call_info, fixed_strides=strides) + + def test__get_strided_loop_errors_bad_call_info(self): + i4 = np.dtype("i4") + dt, call_info = np.negative._resolve_dtypes_and_context((i4, i4)) + + with pytest.raises(ValueError, match="PyCapsule"): + np.negative._get_strided_loop("not the capsule!") + + with pytest.raises(TypeError, match=".*incompatible context"): + np.add._get_strided_loop(call_info) + + np.negative._get_strided_loop(call_info) + with pytest.raises(TypeError): + # cannot call it a second time: + np.negative._get_strided_loop(call_info) + + def test_long_arrays(self): + t = np.zeros((1029, 917), dtype=np.single) + t[0][0] = 1 + t[28][414] = 1 + tc = np.cos(t) + assert_equal(tc[0][0], tc[28][414]) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_umath.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_umath.py new file mode 100644 index 0000000000000000000000000000000000000000..dcde973c0374bf4ed478fc126a72a6303753a53a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_umath.py @@ -0,0 +1,4814 @@ +import platform +import warnings +import fnmatch +import itertools +import pytest +import sys +import os +import operator +from fractions import Fraction +from functools import reduce +from collections import namedtuple + +import numpy._core.umath as ncu +from numpy._core import _umath_tests as ncu_tests, sctypes +import numpy as np +from numpy.testing import ( + assert_, assert_equal, assert_raises, assert_raises_regex, + assert_array_equal, assert_almost_equal, assert_array_almost_equal, + assert_array_max_ulp, assert_allclose, assert_no_warnings, suppress_warnings, + _gen_alignment_data, assert_array_almost_equal_nulp, IS_WASM, IS_MUSL, + IS_PYPY, HAS_REFCOUNT + ) +from numpy.testing._private.utils import _glibc_older_than + +UFUNCS = [obj for obj in np._core.umath.__dict__.values() + if isinstance(obj, np.ufunc)] + +UFUNCS_UNARY = [ + uf for uf in UFUNCS if uf.nin == 1 +] +UFUNCS_UNARY_FP = [ + uf for uf in UFUNCS_UNARY if 'f->f' in uf.types +] + +UFUNCS_BINARY = [ + uf for uf in UFUNCS if uf.nin == 2 +] +UFUNCS_BINARY_ACC = [ + uf for uf in UFUNCS_BINARY if hasattr(uf, "accumulate") and uf.nout == 1 +] + +def interesting_binop_operands(val1, val2, dtype): + """ + Helper to create "interesting" operands to cover common code paths: + * scalar inputs + * only first "values" is an array (e.g. scalar division fast-paths) + * Longer array (SIMD) placing the value of interest at different positions + * Oddly strided arrays which may not be SIMD compatible + + It does not attempt to cover unaligned access or mixed dtypes. + These are normally handled by the casting/buffering machinery. + + This is not a fixture (currently), since I believe a fixture normally + only yields once? + """ + fill_value = 1 # could be a parameter, but maybe not an optional one? + + arr1 = np.full(10003, dtype=dtype, fill_value=fill_value) + arr2 = np.full(10003, dtype=dtype, fill_value=fill_value) + + arr1[0] = val1 + arr2[0] = val2 + + extractor = lambda res: res + yield arr1[0], arr2[0], extractor, "scalars" + + extractor = lambda res: res + yield arr1[0, ...], arr2[0, ...], extractor, "scalar-arrays" + + # reset array values to fill_value: + arr1[0] = fill_value + arr2[0] = fill_value + + for pos in [0, 1, 2, 3, 4, 5, -1, -2, -3, -4]: + arr1[pos] = val1 + arr2[pos] = val2 + + extractor = lambda res: res[pos] + yield arr1, arr2, extractor, f"off-{pos}" + yield arr1, arr2[pos], extractor, f"off-{pos}-with-scalar" + + arr1[pos] = fill_value + arr2[pos] = fill_value + + for stride in [-1, 113]: + op1 = arr1[::stride] + op2 = arr2[::stride] + op1[10] = val1 + op2[10] = val2 + + extractor = lambda res: res[10] + yield op1, op2, extractor, f"stride-{stride}" + + op1[10] = fill_value + op2[10] = fill_value + + +def on_powerpc(): + """ True if we are running on a Power PC platform.""" + return platform.processor() == 'powerpc' or \ + platform.machine().startswith('ppc') + + +def bad_arcsinh(): + """The blocklisted trig functions are not accurate on aarch64/PPC for + complex256. Rather than dig through the actual problem skip the + test. This should be fixed when we can move past glibc2.17 + which is the version in manylinux2014 + """ + if platform.machine() == 'aarch64': + x = 1.78e-10 + elif on_powerpc(): + x = 2.16e-10 + else: + return False + v1 = np.arcsinh(np.float128(x)) + v2 = np.arcsinh(np.complex256(x)).real + # The eps for float128 is 1-e33, so this is way bigger + return abs((v1 / v2) - 1.0) > 1e-23 + + +class _FilterInvalids: + def setup_method(self): + self.olderr = np.seterr(invalid='ignore') + + def teardown_method(self): + np.seterr(**self.olderr) + + +class TestConstants: + def test_pi(self): + assert_allclose(ncu.pi, 3.141592653589793, 1e-15) + + def test_e(self): + assert_allclose(ncu.e, 2.718281828459045, 1e-15) + + def test_euler_gamma(self): + assert_allclose(ncu.euler_gamma, 0.5772156649015329, 1e-15) + + +class TestOut: + def test_out_subok(self): + for subok in (True, False): + a = np.array(0.5) + o = np.empty(()) + + r = np.add(a, 2, o, subok=subok) + assert_(r is o) + r = np.add(a, 2, out=o, subok=subok) + assert_(r is o) + r = np.add(a, 2, out=(o,), subok=subok) + assert_(r is o) + + d = np.array(5.7) + o1 = np.empty(()) + o2 = np.empty((), dtype=np.int32) + + r1, r2 = np.frexp(d, o1, None, subok=subok) + assert_(r1 is o1) + r1, r2 = np.frexp(d, None, o2, subok=subok) + assert_(r2 is o2) + r1, r2 = np.frexp(d, o1, o2, subok=subok) + assert_(r1 is o1) + assert_(r2 is o2) + + r1, r2 = np.frexp(d, out=(o1, None), subok=subok) + assert_(r1 is o1) + r1, r2 = np.frexp(d, out=(None, o2), subok=subok) + assert_(r2 is o2) + r1, r2 = np.frexp(d, out=(o1, o2), subok=subok) + assert_(r1 is o1) + assert_(r2 is o2) + + with assert_raises(TypeError): + # Out argument must be tuple, since there are multiple outputs. + r1, r2 = np.frexp(d, out=o1, subok=subok) + + assert_raises(TypeError, np.add, a, 2, o, o, subok=subok) + assert_raises(TypeError, np.add, a, 2, o, out=o, subok=subok) + assert_raises(TypeError, np.add, a, 2, None, out=o, subok=subok) + assert_raises(ValueError, np.add, a, 2, out=(o, o), subok=subok) + assert_raises(ValueError, np.add, a, 2, out=(), subok=subok) + assert_raises(TypeError, np.add, a, 2, [], subok=subok) + assert_raises(TypeError, np.add, a, 2, out=[], subok=subok) + assert_raises(TypeError, np.add, a, 2, out=([],), subok=subok) + o.flags.writeable = False + assert_raises(ValueError, np.add, a, 2, o, subok=subok) + assert_raises(ValueError, np.add, a, 2, out=o, subok=subok) + assert_raises(ValueError, np.add, a, 2, out=(o,), subok=subok) + + def test_out_wrap_subok(self): + class ArrayWrap(np.ndarray): + __array_priority__ = 10 + + def __new__(cls, arr): + return np.asarray(arr).view(cls).copy() + + def __array_wrap__(self, arr, context=None, return_scalar=False): + return arr.view(type(self)) + + for subok in (True, False): + a = ArrayWrap([0.5]) + + r = np.add(a, 2, subok=subok) + if subok: + assert_(isinstance(r, ArrayWrap)) + else: + assert_(type(r) == np.ndarray) + + r = np.add(a, 2, None, subok=subok) + if subok: + assert_(isinstance(r, ArrayWrap)) + else: + assert_(type(r) == np.ndarray) + + r = np.add(a, 2, out=None, subok=subok) + if subok: + assert_(isinstance(r, ArrayWrap)) + else: + assert_(type(r) == np.ndarray) + + r = np.add(a, 2, out=(None,), subok=subok) + if subok: + assert_(isinstance(r, ArrayWrap)) + else: + assert_(type(r) == np.ndarray) + + d = ArrayWrap([5.7]) + o1 = np.empty((1,)) + o2 = np.empty((1,), dtype=np.int32) + + r1, r2 = np.frexp(d, o1, subok=subok) + if subok: + assert_(isinstance(r2, ArrayWrap)) + else: + assert_(type(r2) == np.ndarray) + + r1, r2 = np.frexp(d, o1, None, subok=subok) + if subok: + assert_(isinstance(r2, ArrayWrap)) + else: + assert_(type(r2) == np.ndarray) + + r1, r2 = np.frexp(d, None, o2, subok=subok) + if subok: + assert_(isinstance(r1, ArrayWrap)) + else: + assert_(type(r1) == np.ndarray) + + r1, r2 = np.frexp(d, out=(o1, None), subok=subok) + if subok: + assert_(isinstance(r2, ArrayWrap)) + else: + assert_(type(r2) == np.ndarray) + + r1, r2 = np.frexp(d, out=(None, o2), subok=subok) + if subok: + assert_(isinstance(r1, ArrayWrap)) + else: + assert_(type(r1) == np.ndarray) + + with assert_raises(TypeError): + # Out argument must be tuple, since there are multiple outputs. + r1, r2 = np.frexp(d, out=o1, subok=subok) + + @pytest.mark.skipif(not HAS_REFCOUNT, reason="Python lacks refcounts") + def test_out_wrap_no_leak(self): + # Regression test for gh-26545 + class ArrSubclass(np.ndarray): + pass + + arr = np.arange(10).view(ArrSubclass) + + arr *= 1 + assert sys.getrefcount(arr) == 2 + + +class TestComparisons: + import operator + + @pytest.mark.parametrize('dtype', sctypes['uint'] + sctypes['int'] + + sctypes['float'] + [np.bool]) + @pytest.mark.parametrize('py_comp,np_comp', [ + (operator.lt, np.less), + (operator.le, np.less_equal), + (operator.gt, np.greater), + (operator.ge, np.greater_equal), + (operator.eq, np.equal), + (operator.ne, np.not_equal) + ]) + def test_comparison_functions(self, dtype, py_comp, np_comp): + # Initialize input arrays + if dtype == np.bool: + a = np.random.choice(a=[False, True], size=1000) + b = np.random.choice(a=[False, True], size=1000) + scalar = True + else: + a = np.random.randint(low=1, high=10, size=1000).astype(dtype) + b = np.random.randint(low=1, high=10, size=1000).astype(dtype) + scalar = 5 + np_scalar = np.dtype(dtype).type(scalar) + a_lst = a.tolist() + b_lst = b.tolist() + + # (Binary) Comparison (x1=array, x2=array) + comp_b = np_comp(a, b).view(np.uint8) + comp_b_list = [int(py_comp(x, y)) for x, y in zip(a_lst, b_lst)] + + # (Scalar1) Comparison (x1=scalar, x2=array) + comp_s1 = np_comp(np_scalar, b).view(np.uint8) + comp_s1_list = [int(py_comp(scalar, x)) for x in b_lst] + + # (Scalar2) Comparison (x1=array, x2=scalar) + comp_s2 = np_comp(a, np_scalar).view(np.uint8) + comp_s2_list = [int(py_comp(x, scalar)) for x in a_lst] + + # Sequence: Binary, Scalar1 and Scalar2 + assert_(comp_b.tolist() == comp_b_list, + f"Failed comparison ({py_comp.__name__})") + assert_(comp_s1.tolist() == comp_s1_list, + f"Failed comparison ({py_comp.__name__})") + assert_(comp_s2.tolist() == comp_s2_list, + f"Failed comparison ({py_comp.__name__})") + + def test_ignore_object_identity_in_equal(self): + # Check comparing identical objects whose comparison + # is not a simple boolean, e.g., arrays that are compared elementwise. + a = np.array([np.array([1, 2, 3]), None], dtype=object) + assert_raises(ValueError, np.equal, a, a) + + # Check error raised when comparing identical non-comparable objects. + class FunkyType: + def __eq__(self, other): + raise TypeError("I won't compare") + + a = np.array([FunkyType()]) + assert_raises(TypeError, np.equal, a, a) + + # Check identity doesn't override comparison mismatch. + a = np.array([np.nan], dtype=object) + assert_equal(np.equal(a, a), [False]) + + def test_ignore_object_identity_in_not_equal(self): + # Check comparing identical objects whose comparison + # is not a simple boolean, e.g., arrays that are compared elementwise. + a = np.array([np.array([1, 2, 3]), None], dtype=object) + assert_raises(ValueError, np.not_equal, a, a) + + # Check error raised when comparing identical non-comparable objects. + class FunkyType: + def __ne__(self, other): + raise TypeError("I won't compare") + + a = np.array([FunkyType()]) + assert_raises(TypeError, np.not_equal, a, a) + + # Check identity doesn't override comparison mismatch. + a = np.array([np.nan], dtype=object) + assert_equal(np.not_equal(a, a), [True]) + + def test_error_in_equal_reduce(self): + # gh-20929 + # make sure np.equal.reduce raises a TypeError if an array is passed + # without specifying the dtype + a = np.array([0, 0]) + assert_equal(np.equal.reduce(a, dtype=bool), True) + assert_raises(TypeError, np.equal.reduce, a) + + def test_object_dtype(self): + assert np.equal(1, [1], dtype=object).dtype == object + assert np.equal(1, [1], signature=(None, None, "O")).dtype == object + + def test_object_nonbool_dtype_error(self): + # bool output dtype is fine of course: + assert np.equal(1, [1], dtype=bool).dtype == bool + + # but the following are examples do not have a loop: + with pytest.raises(TypeError, match="No loop matching"): + np.equal(1, 1, dtype=np.int64) + + with pytest.raises(TypeError, match="No loop matching"): + np.equal(1, 1, sig=(None, None, "l")) + + @pytest.mark.parametrize("dtypes", ["qQ", "Qq"]) + @pytest.mark.parametrize('py_comp, np_comp', [ + (operator.lt, np.less), + (operator.le, np.less_equal), + (operator.gt, np.greater), + (operator.ge, np.greater_equal), + (operator.eq, np.equal), + (operator.ne, np.not_equal) + ]) + @pytest.mark.parametrize("vals", [(2**60, 2**60+1), (2**60+1, 2**60)]) + def test_large_integer_direct_comparison( + self, dtypes, py_comp, np_comp, vals): + # Note that float(2**60) + 1 == float(2**60). + a1 = np.array([2**60], dtype=dtypes[0]) + a2 = np.array([2**60 + 1], dtype=dtypes[1]) + expected = py_comp(2**60, 2**60+1) + + assert py_comp(a1, a2) == expected + assert np_comp(a1, a2) == expected + # Also check the scalars: + s1 = a1[0] + s2 = a2[0] + assert isinstance(s1, np.integer) + assert isinstance(s2, np.integer) + # The Python operator here is mainly interesting: + assert py_comp(s1, s2) == expected + assert np_comp(s1, s2) == expected + + @pytest.mark.parametrize("dtype", np.typecodes['UnsignedInteger']) + @pytest.mark.parametrize('py_comp_func, np_comp_func', [ + (operator.lt, np.less), + (operator.le, np.less_equal), + (operator.gt, np.greater), + (operator.ge, np.greater_equal), + (operator.eq, np.equal), + (operator.ne, np.not_equal) + ]) + @pytest.mark.parametrize("flip", [True, False]) + def test_unsigned_signed_direct_comparison( + self, dtype, py_comp_func, np_comp_func, flip): + if flip: + py_comp = lambda x, y: py_comp_func(y, x) + np_comp = lambda x, y: np_comp_func(y, x) + else: + py_comp = py_comp_func + np_comp = np_comp_func + + arr = np.array([np.iinfo(dtype).max], dtype=dtype) + expected = py_comp(int(arr[0]), -1) + + assert py_comp(arr, -1) == expected + assert np_comp(arr, -1) == expected + + scalar = arr[0] + assert isinstance(scalar, np.integer) + # The Python operator here is mainly interesting: + assert py_comp(scalar, -1) == expected + assert np_comp(scalar, -1) == expected + + +class TestAdd: + def test_reduce_alignment(self): + # gh-9876 + # make sure arrays with weird strides work with the optimizations in + # pairwise_sum_@TYPE@. On x86, the 'b' field will count as aligned at a + # 4 byte offset, even though its itemsize is 8. + a = np.zeros(2, dtype=[('a', np.int32), ('b', np.float64)]) + a['a'] = -1 + assert_equal(a['b'].sum(), 0) + + +class TestDivision: + def test_division_int(self): + # int division should follow Python + x = np.array([5, 10, 90, 100, -5, -10, -90, -100, -120]) + if 5 / 10 == 0.5: + assert_equal(x / 100, [0.05, 0.1, 0.9, 1, + -0.05, -0.1, -0.9, -1, -1.2]) + else: + assert_equal(x / 100, [0, 0, 0, 1, -1, -1, -1, -1, -2]) + assert_equal(x // 100, [0, 0, 0, 1, -1, -1, -1, -1, -2]) + assert_equal(x % 100, [5, 10, 90, 0, 95, 90, 10, 0, 80]) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.parametrize("dtype,ex_val", itertools.product( + sctypes['int'] + sctypes['uint'], ( + ( + # dividend + "np.array(range(fo.max-lsize, fo.max)).astype(dtype)," + # divisors + "np.arange(lsize).astype(dtype)," + # scalar divisors + "range(15)" + ), + ( + # dividend + "np.arange(fo.min, fo.min+lsize).astype(dtype)," + # divisors + "np.arange(lsize//-2, lsize//2).astype(dtype)," + # scalar divisors + "range(fo.min, fo.min + 15)" + ), ( + # dividend + "np.array(range(fo.max-lsize, fo.max)).astype(dtype)," + # divisors + "np.arange(lsize).astype(dtype)," + # scalar divisors + "[1,3,9,13,neg, fo.min+1, fo.min//2, fo.max//3, fo.max//4]" + ) + ) + )) + def test_division_int_boundary(self, dtype, ex_val): + fo = np.iinfo(dtype) + neg = -1 if fo.min < 0 else 1 + # Large enough to test SIMD loops and remainder elements + lsize = 512 + 7 + a, b, divisors = eval(ex_val) + a_lst, b_lst = a.tolist(), b.tolist() + + c_div = lambda n, d: ( + 0 if d == 0 else ( + fo.min if (n and n == fo.min and d == -1) else n//d + ) + ) + with np.errstate(divide='ignore'): + ac = a.copy() + ac //= b + div_ab = a // b + div_lst = [c_div(x, y) for x, y in zip(a_lst, b_lst)] + + msg = "Integer arrays floor division check (//)" + assert all(div_ab == div_lst), msg + msg_eq = "Integer arrays floor division check (//=)" + assert all(ac == div_lst), msg_eq + + for divisor in divisors: + ac = a.copy() + with np.errstate(divide='ignore', over='ignore'): + div_a = a // divisor + ac //= divisor + div_lst = [c_div(i, divisor) for i in a_lst] + + assert all(div_a == div_lst), msg + assert all(ac == div_lst), msg_eq + + with np.errstate(divide='raise', over='raise'): + if 0 in b: + # Verify overflow case + with pytest.raises(FloatingPointError, + match="divide by zero encountered in floor_divide"): + a // b + else: + a // b + if fo.min and fo.min in a: + with pytest.raises(FloatingPointError, + match='overflow encountered in floor_divide'): + a // -1 + elif fo.min: + a // -1 + with pytest.raises(FloatingPointError, + match="divide by zero encountered in floor_divide"): + a // 0 + with pytest.raises(FloatingPointError, + match="divide by zero encountered in floor_divide"): + ac = a.copy() + ac //= 0 + + np.array([], dtype=dtype) // 0 + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.parametrize("dtype,ex_val", itertools.product( + sctypes['int'] + sctypes['uint'], ( + "np.array([fo.max, 1, 2, 1, 1, 2, 3], dtype=dtype)", + "np.array([fo.min, 1, -2, 1, 1, 2, -3]).astype(dtype)", + "np.arange(fo.min, fo.min+(100*10), 10, dtype=dtype)", + "np.array(range(fo.max-(100*7), fo.max, 7)).astype(dtype)", + ) + )) + def test_division_int_reduce(self, dtype, ex_val): + fo = np.iinfo(dtype) + a = eval(ex_val) + lst = a.tolist() + c_div = lambda n, d: ( + 0 if d == 0 or (n and n == fo.min and d == -1) else n//d + ) + + with np.errstate(divide='ignore'): + div_a = np.floor_divide.reduce(a) + div_lst = reduce(c_div, lst) + msg = "Reduce floor integer division check" + assert div_a == div_lst, msg + + with np.errstate(divide='raise', over='raise'): + with pytest.raises(FloatingPointError, + match="divide by zero encountered in reduce"): + np.floor_divide.reduce(np.arange(-100, 100).astype(dtype)) + if fo.min: + with pytest.raises(FloatingPointError, + match='overflow encountered in reduce'): + np.floor_divide.reduce( + np.array([fo.min, 1, -1], dtype=dtype) + ) + + @pytest.mark.parametrize( + "dividend,divisor,quotient", + [(np.timedelta64(2,'Y'), np.timedelta64(2,'M'), 12), + (np.timedelta64(2,'Y'), np.timedelta64(-2,'M'), -12), + (np.timedelta64(-2,'Y'), np.timedelta64(2,'M'), -12), + (np.timedelta64(-2,'Y'), np.timedelta64(-2,'M'), 12), + (np.timedelta64(2,'M'), np.timedelta64(-2,'Y'), -1), + (np.timedelta64(2,'Y'), np.timedelta64(0,'M'), 0), + (np.timedelta64(2,'Y'), 2, np.timedelta64(1,'Y')), + (np.timedelta64(2,'Y'), -2, np.timedelta64(-1,'Y')), + (np.timedelta64(-2,'Y'), 2, np.timedelta64(-1,'Y')), + (np.timedelta64(-2,'Y'), -2, np.timedelta64(1,'Y')), + (np.timedelta64(-2,'Y'), -2, np.timedelta64(1,'Y')), + (np.timedelta64(-2,'Y'), -3, np.timedelta64(0,'Y')), + (np.timedelta64(-2,'Y'), 0, np.timedelta64('Nat','Y')), + ]) + def test_division_int_timedelta(self, dividend, divisor, quotient): + # If either divisor is 0 or quotient is Nat, check for division by 0 + if divisor and (isinstance(quotient, int) or not np.isnat(quotient)): + msg = "Timedelta floor division check" + assert dividend // divisor == quotient, msg + + # Test for arrays as well + msg = "Timedelta arrays floor division check" + dividend_array = np.array([dividend]*5) + quotient_array = np.array([quotient]*5) + assert all(dividend_array // divisor == quotient_array), msg + else: + if IS_WASM: + pytest.skip("fp errors don't work in wasm") + with np.errstate(divide='raise', invalid='raise'): + with pytest.raises(FloatingPointError): + dividend // divisor + + def test_division_complex(self): + # check that implementation is correct + msg = "Complex division implementation check" + x = np.array([1. + 1.*1j, 1. + .5*1j, 1. + 2.*1j], dtype=np.complex128) + assert_almost_equal(x**2/x, x, err_msg=msg) + # check overflow, underflow + msg = "Complex division overflow/underflow check" + x = np.array([1.e+110, 1.e-110], dtype=np.complex128) + y = x**2/x + assert_almost_equal(y/x, [1, 1], err_msg=msg) + + def test_zero_division_complex(self): + with np.errstate(invalid="ignore", divide="ignore"): + x = np.array([0.0], dtype=np.complex128) + y = 1.0/x + assert_(np.isinf(y)[0]) + y = complex(np.inf, np.nan)/x + assert_(np.isinf(y)[0]) + y = complex(np.nan, np.inf)/x + assert_(np.isinf(y)[0]) + y = complex(np.inf, np.inf)/x + assert_(np.isinf(y)[0]) + y = 0.0/x + assert_(np.isnan(y)[0]) + + def test_floor_division_complex(self): + # check that floor division, divmod and remainder raises type errors + x = np.array([.9 + 1j, -.1 + 1j, .9 + .5*1j, .9 + 2.*1j], dtype=np.complex128) + with pytest.raises(TypeError): + x // 7 + with pytest.raises(TypeError): + np.divmod(x, 7) + with pytest.raises(TypeError): + np.remainder(x, 7) + + def test_floor_division_signed_zero(self): + # Check that the sign bit is correctly set when dividing positive and + # negative zero by one. + x = np.zeros(10) + assert_equal(np.signbit(x//1), 0) + assert_equal(np.signbit((-x)//1), 1) + + @pytest.mark.skipif(hasattr(np.__config__, "blas_ssl2_info"), + reason="gh-22982") + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.parametrize('dtype', np.typecodes['Float']) + def test_floor_division_errors(self, dtype): + fnan = np.array(np.nan, dtype=dtype) + fone = np.array(1.0, dtype=dtype) + fzer = np.array(0.0, dtype=dtype) + finf = np.array(np.inf, dtype=dtype) + # divide by zero error check + with np.errstate(divide='raise', invalid='ignore'): + assert_raises(FloatingPointError, np.floor_divide, fone, fzer) + with np.errstate(divide='ignore', invalid='raise'): + np.floor_divide(fone, fzer) + + # The following already contain a NaN and should not warn + with np.errstate(all='raise'): + np.floor_divide(fnan, fone) + np.floor_divide(fone, fnan) + np.floor_divide(fnan, fzer) + np.floor_divide(fzer, fnan) + + @pytest.mark.parametrize('dtype', np.typecodes['Float']) + def test_floor_division_corner_cases(self, dtype): + # test corner cases like 1.0//0.0 for errors and return vals + x = np.zeros(10, dtype=dtype) + y = np.ones(10, dtype=dtype) + fnan = np.array(np.nan, dtype=dtype) + fone = np.array(1.0, dtype=dtype) + fzer = np.array(0.0, dtype=dtype) + finf = np.array(np.inf, dtype=dtype) + with suppress_warnings() as sup: + sup.filter(RuntimeWarning, "invalid value encountered in floor_divide") + div = np.floor_divide(fnan, fone) + assert(np.isnan(div)), "dt: %s, div: %s" % (dt, div) + div = np.floor_divide(fone, fnan) + assert(np.isnan(div)), "dt: %s, div: %s" % (dt, div) + div = np.floor_divide(fnan, fzer) + assert(np.isnan(div)), "dt: %s, div: %s" % (dt, div) + # verify 1.0//0.0 computations return inf + with np.errstate(divide='ignore'): + z = np.floor_divide(y, x) + assert_(np.isinf(z).all()) + +def floor_divide_and_remainder(x, y): + return (np.floor_divide(x, y), np.remainder(x, y)) + + +def _signs(dt): + if dt in np.typecodes['UnsignedInteger']: + return (+1,) + else: + return (+1, -1) + + +class TestRemainder: + + def test_remainder_basic(self): + dt = np.typecodes['AllInteger'] + np.typecodes['Float'] + for op in [floor_divide_and_remainder, np.divmod]: + for dt1, dt2 in itertools.product(dt, dt): + for sg1, sg2 in itertools.product(_signs(dt1), _signs(dt2)): + fmt = 'op: %s, dt1: %s, dt2: %s, sg1: %s, sg2: %s' + msg = fmt % (op.__name__, dt1, dt2, sg1, sg2) + a = np.array(sg1*71, dtype=dt1) + b = np.array(sg2*19, dtype=dt2) + div, rem = op(a, b) + assert_equal(div*b + rem, a, err_msg=msg) + if sg2 == -1: + assert_(b < rem <= 0, msg) + else: + assert_(b > rem >= 0, msg) + + def test_float_remainder_exact(self): + # test that float results are exact for small integers. This also + # holds for the same integers scaled by powers of two. + nlst = list(range(-127, 0)) + plst = list(range(1, 128)) + dividend = nlst + [0] + plst + divisor = nlst + plst + arg = list(itertools.product(dividend, divisor)) + tgt = list(divmod(*t) for t in arg) + + a, b = np.array(arg, dtype=int).T + # convert exact integer results from Python to float so that + # signed zero can be used, it is checked. + tgtdiv, tgtrem = np.array(tgt, dtype=float).T + tgtdiv = np.where((tgtdiv == 0.0) & ((b < 0) ^ (a < 0)), -0.0, tgtdiv) + tgtrem = np.where((tgtrem == 0.0) & (b < 0), -0.0, tgtrem) + + for op in [floor_divide_and_remainder, np.divmod]: + for dt in np.typecodes['Float']: + msg = 'op: %s, dtype: %s' % (op.__name__, dt) + fa = a.astype(dt) + fb = b.astype(dt) + div, rem = op(fa, fb) + assert_equal(div, tgtdiv, err_msg=msg) + assert_equal(rem, tgtrem, err_msg=msg) + + def test_float_remainder_roundoff(self): + # gh-6127 + dt = np.typecodes['Float'] + for op in [floor_divide_and_remainder, np.divmod]: + for dt1, dt2 in itertools.product(dt, dt): + for sg1, sg2 in itertools.product((+1, -1), (+1, -1)): + fmt = 'op: %s, dt1: %s, dt2: %s, sg1: %s, sg2: %s' + msg = fmt % (op.__name__, dt1, dt2, sg1, sg2) + a = np.array(sg1*78*6e-8, dtype=dt1) + b = np.array(sg2*6e-8, dtype=dt2) + div, rem = op(a, b) + # Equal assertion should hold when fmod is used + assert_equal(div*b + rem, a, err_msg=msg) + if sg2 == -1: + assert_(b < rem <= 0, msg) + else: + assert_(b > rem >= 0, msg) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.xfail(sys.platform.startswith("darwin"), + reason="MacOS seems to not give the correct 'invalid' warning for " + "`fmod`. Hopefully, others always do.") + @pytest.mark.parametrize('dtype', np.typecodes['Float']) + def test_float_divmod_errors(self, dtype): + # Check valid errors raised for divmod and remainder + fzero = np.array(0.0, dtype=dtype) + fone = np.array(1.0, dtype=dtype) + finf = np.array(np.inf, dtype=dtype) + fnan = np.array(np.nan, dtype=dtype) + # since divmod is combination of both remainder and divide + # ops it will set both dividebyzero and invalid flags + with np.errstate(divide='raise', invalid='ignore'): + assert_raises(FloatingPointError, np.divmod, fone, fzero) + with np.errstate(divide='ignore', invalid='raise'): + assert_raises(FloatingPointError, np.divmod, fone, fzero) + with np.errstate(invalid='raise'): + assert_raises(FloatingPointError, np.divmod, fzero, fzero) + with np.errstate(invalid='raise'): + assert_raises(FloatingPointError, np.divmod, finf, finf) + with np.errstate(divide='ignore', invalid='raise'): + assert_raises(FloatingPointError, np.divmod, finf, fzero) + with np.errstate(divide='raise', invalid='ignore'): + # inf / 0 does not set any flags, only the modulo creates a NaN + np.divmod(finf, fzero) + + @pytest.mark.skipif(hasattr(np.__config__, "blas_ssl2_info"), + reason="gh-22982") + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.xfail(sys.platform.startswith("darwin"), + reason="MacOS seems to not give the correct 'invalid' warning for " + "`fmod`. Hopefully, others always do.") + @pytest.mark.parametrize('dtype', np.typecodes['Float']) + @pytest.mark.parametrize('fn', [np.fmod, np.remainder]) + def test_float_remainder_errors(self, dtype, fn): + fzero = np.array(0.0, dtype=dtype) + fone = np.array(1.0, dtype=dtype) + finf = np.array(np.inf, dtype=dtype) + fnan = np.array(np.nan, dtype=dtype) + + # The following already contain a NaN and should not warn. + with np.errstate(all='raise'): + with pytest.raises(FloatingPointError, + match="invalid value"): + fn(fone, fzero) + fn(fnan, fzero) + fn(fzero, fnan) + fn(fone, fnan) + fn(fnan, fone) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_float_remainder_overflow(self): + a = np.finfo(np.float64).tiny + with np.errstate(over='ignore', invalid='ignore'): + div, mod = np.divmod(4, a) + np.isinf(div) + assert_(mod == 0) + with np.errstate(over='raise', invalid='ignore'): + assert_raises(FloatingPointError, np.divmod, 4, a) + with np.errstate(invalid='raise', over='ignore'): + assert_raises(FloatingPointError, np.divmod, 4, a) + + def test_float_divmod_corner_cases(self): + # check nan cases + for dt in np.typecodes['Float']: + fnan = np.array(np.nan, dtype=dt) + fone = np.array(1.0, dtype=dt) + fzer = np.array(0.0, dtype=dt) + finf = np.array(np.inf, dtype=dt) + with suppress_warnings() as sup: + sup.filter(RuntimeWarning, "invalid value encountered in divmod") + sup.filter(RuntimeWarning, "divide by zero encountered in divmod") + div, rem = np.divmod(fone, fzer) + assert(np.isinf(div)), 'dt: %s, div: %s' % (dt, rem) + assert(np.isnan(rem)), 'dt: %s, rem: %s' % (dt, rem) + div, rem = np.divmod(fzer, fzer) + assert(np.isnan(rem)), 'dt: %s, rem: %s' % (dt, rem) + assert_(np.isnan(div)), 'dt: %s, rem: %s' % (dt, rem) + div, rem = np.divmod(finf, finf) + assert(np.isnan(div)), 'dt: %s, rem: %s' % (dt, rem) + assert(np.isnan(rem)), 'dt: %s, rem: %s' % (dt, rem) + div, rem = np.divmod(finf, fzer) + assert(np.isinf(div)), 'dt: %s, rem: %s' % (dt, rem) + assert(np.isnan(rem)), 'dt: %s, rem: %s' % (dt, rem) + div, rem = np.divmod(fnan, fone) + assert(np.isnan(rem)), "dt: %s, rem: %s" % (dt, rem) + assert(np.isnan(div)), "dt: %s, rem: %s" % (dt, rem) + div, rem = np.divmod(fone, fnan) + assert(np.isnan(rem)), "dt: %s, rem: %s" % (dt, rem) + assert(np.isnan(div)), "dt: %s, rem: %s" % (dt, rem) + div, rem = np.divmod(fnan, fzer) + assert(np.isnan(rem)), "dt: %s, rem: %s" % (dt, rem) + assert(np.isnan(div)), "dt: %s, rem: %s" % (dt, rem) + + def test_float_remainder_corner_cases(self): + # Check remainder magnitude. + for dt in np.typecodes['Float']: + fone = np.array(1.0, dtype=dt) + fzer = np.array(0.0, dtype=dt) + fnan = np.array(np.nan, dtype=dt) + b = np.array(1.0, dtype=dt) + a = np.nextafter(np.array(0.0, dtype=dt), -b) + rem = np.remainder(a, b) + assert_(rem <= b, 'dt: %s' % dt) + rem = np.remainder(-a, -b) + assert_(rem >= -b, 'dt: %s' % dt) + + # Check nans, inf + with suppress_warnings() as sup: + sup.filter(RuntimeWarning, "invalid value encountered in remainder") + sup.filter(RuntimeWarning, "invalid value encountered in fmod") + for dt in np.typecodes['Float']: + fone = np.array(1.0, dtype=dt) + fzer = np.array(0.0, dtype=dt) + finf = np.array(np.inf, dtype=dt) + fnan = np.array(np.nan, dtype=dt) + rem = np.remainder(fone, fzer) + assert_(np.isnan(rem), 'dt: %s, rem: %s' % (dt, rem)) + # MSVC 2008 returns NaN here, so disable the check. + #rem = np.remainder(fone, finf) + #assert_(rem == fone, 'dt: %s, rem: %s' % (dt, rem)) + rem = np.remainder(finf, fone) + fmod = np.fmod(finf, fone) + assert_(np.isnan(fmod), 'dt: %s, fmod: %s' % (dt, fmod)) + assert_(np.isnan(rem), 'dt: %s, rem: %s' % (dt, rem)) + rem = np.remainder(finf, finf) + fmod = np.fmod(finf, fone) + assert_(np.isnan(rem), 'dt: %s, rem: %s' % (dt, rem)) + assert_(np.isnan(fmod), 'dt: %s, fmod: %s' % (dt, fmod)) + rem = np.remainder(finf, fzer) + fmod = np.fmod(finf, fzer) + assert_(np.isnan(rem), 'dt: %s, rem: %s' % (dt, rem)) + assert_(np.isnan(fmod), 'dt: %s, fmod: %s' % (dt, fmod)) + rem = np.remainder(fone, fnan) + fmod = np.fmod(fone, fnan) + assert_(np.isnan(rem), 'dt: %s, rem: %s' % (dt, rem)) + assert_(np.isnan(fmod), 'dt: %s, fmod: %s' % (dt, fmod)) + rem = np.remainder(fnan, fzer) + fmod = np.fmod(fnan, fzer) + assert_(np.isnan(rem), 'dt: %s, rem: %s' % (dt, rem)) + assert_(np.isnan(fmod), 'dt: %s, fmod: %s' % (dt, rem)) + rem = np.remainder(fnan, fone) + fmod = np.fmod(fnan, fone) + assert_(np.isnan(rem), 'dt: %s, rem: %s' % (dt, rem)) + assert_(np.isnan(fmod), 'dt: %s, fmod: %s' % (dt, rem)) + + +class TestDivisionIntegerOverflowsAndDivideByZero: + result_type = namedtuple('result_type', + ['nocast', 'casted']) + helper_lambdas = { + 'zero': lambda dtype: 0, + 'min': lambda dtype: np.iinfo(dtype).min, + 'neg_min': lambda dtype: -np.iinfo(dtype).min, + 'min-zero': lambda dtype: (np.iinfo(dtype).min, 0), + 'neg_min-zero': lambda dtype: (-np.iinfo(dtype).min, 0), + } + overflow_results = { + np.remainder: result_type( + helper_lambdas['zero'], helper_lambdas['zero']), + np.fmod: result_type( + helper_lambdas['zero'], helper_lambdas['zero']), + operator.mod: result_type( + helper_lambdas['zero'], helper_lambdas['zero']), + operator.floordiv: result_type( + helper_lambdas['min'], helper_lambdas['neg_min']), + np.floor_divide: result_type( + helper_lambdas['min'], helper_lambdas['neg_min']), + np.divmod: result_type( + helper_lambdas['min-zero'], helper_lambdas['neg_min-zero']) + } + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.parametrize("dtype", np.typecodes["Integer"]) + def test_signed_division_overflow(self, dtype): + to_check = interesting_binop_operands(np.iinfo(dtype).min, -1, dtype) + for op1, op2, extractor, operand_identifier in to_check: + with pytest.warns(RuntimeWarning, match="overflow encountered"): + res = op1 // op2 + + assert res.dtype == op1.dtype + assert extractor(res) == np.iinfo(op1.dtype).min + + # Remainder is well defined though, and does not warn: + res = op1 % op2 + assert res.dtype == op1.dtype + assert extractor(res) == 0 + # Check fmod as well: + res = np.fmod(op1, op2) + assert extractor(res) == 0 + + # Divmod warns for the division part: + with pytest.warns(RuntimeWarning, match="overflow encountered"): + res1, res2 = np.divmod(op1, op2) + + assert res1.dtype == res2.dtype == op1.dtype + assert extractor(res1) == np.iinfo(op1.dtype).min + assert extractor(res2) == 0 + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.parametrize("dtype", np.typecodes["AllInteger"]) + def test_divide_by_zero(self, dtype): + # Note that the return value cannot be well defined here, but NumPy + # currently uses 0 consistently. This could be changed. + to_check = interesting_binop_operands(1, 0, dtype) + for op1, op2, extractor, operand_identifier in to_check: + with pytest.warns(RuntimeWarning, match="divide by zero"): + res = op1 // op2 + + assert res.dtype == op1.dtype + assert extractor(res) == 0 + + with pytest.warns(RuntimeWarning, match="divide by zero"): + res1, res2 = np.divmod(op1, op2) + + assert res1.dtype == res2.dtype == op1.dtype + assert extractor(res1) == 0 + assert extractor(res2) == 0 + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.parametrize("dividend_dtype", sctypes['int']) + @pytest.mark.parametrize("divisor_dtype", sctypes['int']) + @pytest.mark.parametrize("operation", + [np.remainder, np.fmod, np.divmod, np.floor_divide, + operator.mod, operator.floordiv]) + @np.errstate(divide='warn', over='warn') + def test_overflows(self, dividend_dtype, divisor_dtype, operation): + # SIMD tries to perform the operation on as many elements as possible + # that is a multiple of the register's size. We resort to the + # default implementation for the leftover elements. + # We try to cover all paths here. + arrays = [np.array([np.iinfo(dividend_dtype).min]*i, + dtype=dividend_dtype) for i in range(1, 129)] + divisor = np.array([-1], dtype=divisor_dtype) + # If dividend is a larger type than the divisor (`else` case), + # then, result will be a larger type than dividend and will not + # result in an overflow for `divmod` and `floor_divide`. + if np.dtype(dividend_dtype).itemsize >= np.dtype( + divisor_dtype).itemsize and operation in ( + np.divmod, np.floor_divide, operator.floordiv): + with pytest.warns( + RuntimeWarning, + match="overflow encountered in"): + result = operation( + dividend_dtype(np.iinfo(dividend_dtype).min), + divisor_dtype(-1) + ) + assert result == self.overflow_results[operation].nocast( + dividend_dtype) + + # Arrays + for a in arrays: + # In case of divmod, we need to flatten the result + # column first as we get a column vector of quotient and + # remainder and a normal flatten of the expected result. + with pytest.warns( + RuntimeWarning, + match="overflow encountered in"): + result = np.array(operation(a, divisor)).flatten('f') + expected_array = np.array( + [self.overflow_results[operation].nocast( + dividend_dtype)]*len(a)).flatten() + assert_array_equal(result, expected_array) + else: + # Scalars + result = operation( + dividend_dtype(np.iinfo(dividend_dtype).min), + divisor_dtype(-1) + ) + assert result == self.overflow_results[operation].casted( + dividend_dtype) + + # Arrays + for a in arrays: + # See above comment on flatten + result = np.array(operation(a, divisor)).flatten('f') + expected_array = np.array( + [self.overflow_results[operation].casted( + dividend_dtype)]*len(a)).flatten() + assert_array_equal(result, expected_array) + + +class TestCbrt: + def test_cbrt_scalar(self): + assert_almost_equal((np.cbrt(np.float32(-2.5)**3)), -2.5) + + def test_cbrt(self): + x = np.array([1., 2., -3., np.inf, -np.inf]) + assert_almost_equal(np.cbrt(x**3), x) + + assert_(np.isnan(np.cbrt(np.nan))) + assert_equal(np.cbrt(np.inf), np.inf) + assert_equal(np.cbrt(-np.inf), -np.inf) + + +class TestPower: + def test_power_float(self): + x = np.array([1., 2., 3.]) + assert_equal(x**0, [1., 1., 1.]) + assert_equal(x**1, x) + assert_equal(x**2, [1., 4., 9.]) + y = x.copy() + y **= 2 + assert_equal(y, [1., 4., 9.]) + assert_almost_equal(x**(-1), [1., 0.5, 1./3]) + assert_almost_equal(x**(0.5), [1., ncu.sqrt(2), ncu.sqrt(3)]) + + for out, inp, msg in _gen_alignment_data(dtype=np.float32, + type='unary', + max_size=11): + exp = [ncu.sqrt(i) for i in inp] + assert_almost_equal(inp**(0.5), exp, err_msg=msg) + np.sqrt(inp, out=out) + assert_equal(out, exp, err_msg=msg) + + for out, inp, msg in _gen_alignment_data(dtype=np.float64, + type='unary', + max_size=7): + exp = [ncu.sqrt(i) for i in inp] + assert_almost_equal(inp**(0.5), exp, err_msg=msg) + np.sqrt(inp, out=out) + assert_equal(out, exp, err_msg=msg) + + def test_power_complex(self): + x = np.array([1+2j, 2+3j, 3+4j]) + assert_equal(x**0, [1., 1., 1.]) + assert_equal(x**1, x) + assert_almost_equal(x**2, [-3+4j, -5+12j, -7+24j]) + assert_almost_equal(x**3, [(1+2j)**3, (2+3j)**3, (3+4j)**3]) + assert_almost_equal(x**4, [(1+2j)**4, (2+3j)**4, (3+4j)**4]) + assert_almost_equal(x**(-1), [1/(1+2j), 1/(2+3j), 1/(3+4j)]) + assert_almost_equal(x**(-2), [1/(1+2j)**2, 1/(2+3j)**2, 1/(3+4j)**2]) + assert_almost_equal(x**(-3), [(-11+2j)/125, (-46-9j)/2197, + (-117-44j)/15625]) + assert_almost_equal(x**(0.5), [ncu.sqrt(1+2j), ncu.sqrt(2+3j), + ncu.sqrt(3+4j)]) + norm = 1./((x**14)[0]) + assert_almost_equal(x**14 * norm, + [i * norm for i in [-76443+16124j, 23161315+58317492j, + 5583548873 + 2465133864j]]) + + # Ticket #836 + def assert_complex_equal(x, y): + assert_array_equal(x.real, y.real) + assert_array_equal(x.imag, y.imag) + + for z in [complex(0, np.inf), complex(1, np.inf)]: + z = np.array([z], dtype=np.complex128) + with np.errstate(invalid="ignore"): + assert_complex_equal(z**1, z) + assert_complex_equal(z**2, z*z) + assert_complex_equal(z**3, z*z*z) + + def test_power_zero(self): + # ticket #1271 + zero = np.array([0j]) + one = np.array([1+0j]) + cnan = np.array([complex(np.nan, np.nan)]) + # FIXME cinf not tested. + #cinf = np.array([complex(np.inf, 0)]) + + def assert_complex_equal(x, y): + x, y = np.asarray(x), np.asarray(y) + assert_array_equal(x.real, y.real) + assert_array_equal(x.imag, y.imag) + + # positive powers + for p in [0.33, 0.5, 1, 1.5, 2, 3, 4, 5, 6.6]: + assert_complex_equal(np.power(zero, p), zero) + + # zero power + assert_complex_equal(np.power(zero, 0), one) + with np.errstate(invalid="ignore"): + assert_complex_equal(np.power(zero, 0+1j), cnan) + + # negative power + for p in [0.33, 0.5, 1, 1.5, 2, 3, 4, 5, 6.6]: + assert_complex_equal(np.power(zero, -p), cnan) + assert_complex_equal(np.power(zero, -1+0.2j), cnan) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_zero_power_nonzero(self): + # Testing 0^{Non-zero} issue 18378 + zero = np.array([0.0+0.0j]) + cnan = np.array([complex(np.nan, np.nan)]) + + def assert_complex_equal(x, y): + assert_array_equal(x.real, y.real) + assert_array_equal(x.imag, y.imag) + + #Complex powers with positive real part will not generate a warning + assert_complex_equal(np.power(zero, 1+4j), zero) + assert_complex_equal(np.power(zero, 2-3j), zero) + #Testing zero values when real part is greater than zero + assert_complex_equal(np.power(zero, 1+1j), zero) + assert_complex_equal(np.power(zero, 1+0j), zero) + assert_complex_equal(np.power(zero, 1-1j), zero) + #Complex powers will negative real part or 0 (provided imaginary + # part is not zero) will generate a NAN and hence a RUNTIME warning + with pytest.warns(expected_warning=RuntimeWarning) as r: + assert_complex_equal(np.power(zero, -1+1j), cnan) + assert_complex_equal(np.power(zero, -2-3j), cnan) + assert_complex_equal(np.power(zero, -7+0j), cnan) + assert_complex_equal(np.power(zero, 0+1j), cnan) + assert_complex_equal(np.power(zero, 0-1j), cnan) + assert len(r) == 5 + + def test_fast_power(self): + x = np.array([1, 2, 3], np.int16) + res = x**2.0 + assert_((x**2.00001).dtype is res.dtype) + assert_array_equal(res, [1, 4, 9]) + # check the inplace operation on the casted copy doesn't mess with x + assert_(not np.may_share_memory(res, x)) + assert_array_equal(x, [1, 2, 3]) + + # Check that the fast path ignores 1-element not 0-d arrays + res = x ** np.array([[[2]]]) + assert_equal(res.shape, (1, 1, 3)) + + def test_integer_power(self): + a = np.array([15, 15], 'i8') + b = np.power(a, a) + assert_equal(b, [437893890380859375, 437893890380859375]) + + def test_integer_power_with_integer_zero_exponent(self): + dtypes = np.typecodes['Integer'] + for dt in dtypes: + arr = np.arange(-10, 10, dtype=dt) + assert_equal(np.power(arr, 0), np.ones_like(arr)) + + dtypes = np.typecodes['UnsignedInteger'] + for dt in dtypes: + arr = np.arange(10, dtype=dt) + assert_equal(np.power(arr, 0), np.ones_like(arr)) + + def test_integer_power_of_1(self): + dtypes = np.typecodes['AllInteger'] + for dt in dtypes: + arr = np.arange(10, dtype=dt) + assert_equal(np.power(1, arr), np.ones_like(arr)) + + def test_integer_power_of_zero(self): + dtypes = np.typecodes['AllInteger'] + for dt in dtypes: + arr = np.arange(1, 10, dtype=dt) + assert_equal(np.power(0, arr), np.zeros_like(arr)) + + def test_integer_to_negative_power(self): + dtypes = np.typecodes['Integer'] + for dt in dtypes: + a = np.array([0, 1, 2, 3], dtype=dt) + b = np.array([0, 1, 2, -3], dtype=dt) + one = np.array(1, dtype=dt) + minusone = np.array(-1, dtype=dt) + assert_raises(ValueError, np.power, a, b) + assert_raises(ValueError, np.power, a, minusone) + assert_raises(ValueError, np.power, one, b) + assert_raises(ValueError, np.power, one, minusone) + + def test_float_to_inf_power(self): + for dt in [np.float32, np.float64]: + a = np.array([1, 1, 2, 2, -2, -2, np.inf, -np.inf], dt) + b = np.array([np.inf, -np.inf, np.inf, -np.inf, + np.inf, -np.inf, np.inf, -np.inf], dt) + r = np.array([1, 1, np.inf, 0, np.inf, 0, np.inf, 0], dt) + assert_equal(np.power(a, b), r) + + +class TestFloat_power: + def test_type_conversion(self): + arg_type = '?bhilBHILefdgFDG' + res_type = 'ddddddddddddgDDG' + for dtin, dtout in zip(arg_type, res_type): + msg = "dtin: %s, dtout: %s" % (dtin, dtout) + arg = np.ones(1, dtype=dtin) + res = np.float_power(arg, arg) + assert_(res.dtype.name == np.dtype(dtout).name, msg) + + +class TestLog2: + @pytest.mark.parametrize('dt', ['f', 'd', 'g']) + def test_log2_values(self, dt): + x = [1, 2, 4, 8, 16, 32, 64, 128, 256, 512, 1024] + y = [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10] + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt) + assert_almost_equal(np.log2(xf), yf) + + @pytest.mark.parametrize("i", range(1, 65)) + def test_log2_ints(self, i): + # a good log2 implementation should provide this, + # might fail on OS with bad libm + v = np.log2(2.**i) + assert_equal(v, float(i), err_msg='at exponent %d' % i) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_log2_special(self): + assert_equal(np.log2(1.), 0.) + assert_equal(np.log2(np.inf), np.inf) + assert_(np.isnan(np.log2(np.nan))) + + with warnings.catch_warnings(record=True) as w: + warnings.filterwarnings('always', '', RuntimeWarning) + assert_(np.isnan(np.log2(-1.))) + assert_(np.isnan(np.log2(-np.inf))) + assert_equal(np.log2(0.), -np.inf) + assert_(w[0].category is RuntimeWarning) + assert_(w[1].category is RuntimeWarning) + assert_(w[2].category is RuntimeWarning) + + +class TestExp2: + def test_exp2_values(self): + x = [1, 2, 4, 8, 16, 32, 64, 128, 256, 512, 1024] + y = [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10] + for dt in ['f', 'd', 'g']: + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt) + assert_almost_equal(np.exp2(yf), xf) + + +class TestLogAddExp2(_FilterInvalids): + # Need test for intermediate precisions + def test_logaddexp2_values(self): + x = [1, 2, 3, 4, 5] + y = [5, 4, 3, 2, 1] + z = [6, 6, 6, 6, 6] + for dt, dec_ in zip(['f', 'd', 'g'], [6, 15, 15]): + xf = np.log2(np.array(x, dtype=dt)) + yf = np.log2(np.array(y, dtype=dt)) + zf = np.log2(np.array(z, dtype=dt)) + assert_almost_equal(np.logaddexp2(xf, yf), zf, decimal=dec_) + + def test_logaddexp2_range(self): + x = [1000000, -1000000, 1000200, -1000200] + y = [1000200, -1000200, 1000000, -1000000] + z = [1000200, -1000000, 1000200, -1000000] + for dt in ['f', 'd', 'g']: + logxf = np.array(x, dtype=dt) + logyf = np.array(y, dtype=dt) + logzf = np.array(z, dtype=dt) + assert_almost_equal(np.logaddexp2(logxf, logyf), logzf) + + def test_inf(self): + inf = np.inf + x = [inf, -inf, inf, -inf, inf, 1, -inf, 1] + y = [inf, inf, -inf, -inf, 1, inf, 1, -inf] + z = [inf, inf, inf, -inf, inf, inf, 1, 1] + with np.errstate(invalid='raise'): + for dt in ['f', 'd', 'g']: + logxf = np.array(x, dtype=dt) + logyf = np.array(y, dtype=dt) + logzf = np.array(z, dtype=dt) + assert_equal(np.logaddexp2(logxf, logyf), logzf) + + def test_nan(self): + assert_(np.isnan(np.logaddexp2(np.nan, np.inf))) + assert_(np.isnan(np.logaddexp2(np.inf, np.nan))) + assert_(np.isnan(np.logaddexp2(np.nan, 0))) + assert_(np.isnan(np.logaddexp2(0, np.nan))) + assert_(np.isnan(np.logaddexp2(np.nan, np.nan))) + + def test_reduce(self): + assert_equal(np.logaddexp2.identity, -np.inf) + assert_equal(np.logaddexp2.reduce([]), -np.inf) + assert_equal(np.logaddexp2.reduce([-np.inf]), -np.inf) + assert_equal(np.logaddexp2.reduce([-np.inf, 0]), 0) + + +class TestLog: + def test_log_values(self): + x = [1, 2, 4, 8, 16, 32, 64, 128, 256, 512, 1024] + y = [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10] + for dt in ['f', 'd', 'g']: + log2_ = 0.69314718055994530943 + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt)*log2_ + assert_almost_equal(np.log(xf), yf) + + # test aliasing(issue #17761) + x = np.array([2, 0.937500, 3, 0.947500, 1.054697]) + xf = np.log(x) + assert_almost_equal(np.log(x, out=x), xf) + + def test_log_values_maxofdtype(self): + # test log() of max for dtype does not raise + dtypes = [np.float32, np.float64] + # This is failing at least on linux aarch64 (see gh-25460), and on most + # other non x86-64 platforms checking `longdouble` isn't too useful as + # it's an alias for float64. + if platform.machine() == 'x86_64': + dtypes += [np.longdouble] + + for dt in dtypes: + with np.errstate(all='raise'): + x = np.finfo(dt).max + np.log(x) + + def test_log_strides(self): + np.random.seed(42) + strides = np.array([-4,-3,-2,-1,1,2,3,4]) + sizes = np.arange(2,100) + for ii in sizes: + x_f64 = np.float64(np.random.uniform(low=0.01, high=100.0,size=ii)) + x_special = x_f64.copy() + x_special[3:-1:4] = 1.0 + y_true = np.log(x_f64) + y_special = np.log(x_special) + for jj in strides: + assert_array_almost_equal_nulp(np.log(x_f64[::jj]), y_true[::jj], nulp=2) + assert_array_almost_equal_nulp(np.log(x_special[::jj]), y_special[::jj], nulp=2) + +class TestExp: + def test_exp_values(self): + x = [1, 2, 4, 8, 16, 32, 64, 128, 256, 512, 1024] + y = [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10] + for dt in ['f', 'd', 'g']: + log2_ = 0.69314718055994530943 + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt)*log2_ + assert_almost_equal(np.exp(yf), xf) + + def test_exp_strides(self): + np.random.seed(42) + strides = np.array([-4,-3,-2,-1,1,2,3,4]) + sizes = np.arange(2,100) + for ii in sizes: + x_f64 = np.float64(np.random.uniform(low=0.01, high=709.1,size=ii)) + y_true = np.exp(x_f64) + for jj in strides: + assert_array_almost_equal_nulp(np.exp(x_f64[::jj]), y_true[::jj], nulp=2) + +class TestSpecialFloats: + def test_exp_values(self): + with np.errstate(under='raise', over='raise'): + x = [np.nan, np.nan, np.inf, 0.] + y = [np.nan, -np.nan, np.inf, -np.inf] + for dt in ['e', 'f', 'd', 'g']: + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt) + assert_equal(np.exp(yf), xf) + + # See: https://github.com/numpy/numpy/issues/19192 + @pytest.mark.xfail( + _glibc_older_than("2.17"), + reason="Older glibc versions may not raise appropriate FP exceptions" + ) + def test_exp_exceptions(self): + with np.errstate(over='raise'): + assert_raises(FloatingPointError, np.exp, np.float16(11.0899)) + assert_raises(FloatingPointError, np.exp, np.float32(100.)) + assert_raises(FloatingPointError, np.exp, np.float32(1E19)) + assert_raises(FloatingPointError, np.exp, np.float64(800.)) + assert_raises(FloatingPointError, np.exp, np.float64(1E19)) + + with np.errstate(under='raise'): + assert_raises(FloatingPointError, np.exp, np.float16(-17.5)) + assert_raises(FloatingPointError, np.exp, np.float32(-1000.)) + assert_raises(FloatingPointError, np.exp, np.float32(-1E19)) + assert_raises(FloatingPointError, np.exp, np.float64(-1000.)) + assert_raises(FloatingPointError, np.exp, np.float64(-1E19)) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_log_values(self): + with np.errstate(all='ignore'): + x = [np.nan, np.nan, np.inf, np.nan, -np.inf, np.nan] + y = [np.nan, -np.nan, np.inf, -np.inf, 0.0, -1.0] + y1p = [np.nan, -np.nan, np.inf, -np.inf, -1.0, -2.0] + for dt in ['e', 'f', 'd', 'g']: + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt) + yf1p = np.array(y1p, dtype=dt) + assert_equal(np.log(yf), xf) + assert_equal(np.log2(yf), xf) + assert_equal(np.log10(yf), xf) + assert_equal(np.log1p(yf1p), xf) + + with np.errstate(divide='raise'): + for dt in ['e', 'f', 'd']: + assert_raises(FloatingPointError, np.log, + np.array(0.0, dtype=dt)) + assert_raises(FloatingPointError, np.log2, + np.array(0.0, dtype=dt)) + assert_raises(FloatingPointError, np.log10, + np.array(0.0, dtype=dt)) + assert_raises(FloatingPointError, np.log1p, + np.array(-1.0, dtype=dt)) + + with np.errstate(invalid='raise'): + for dt in ['e', 'f', 'd']: + assert_raises(FloatingPointError, np.log, + np.array(-np.inf, dtype=dt)) + assert_raises(FloatingPointError, np.log, + np.array(-1.0, dtype=dt)) + assert_raises(FloatingPointError, np.log2, + np.array(-np.inf, dtype=dt)) + assert_raises(FloatingPointError, np.log2, + np.array(-1.0, dtype=dt)) + assert_raises(FloatingPointError, np.log10, + np.array(-np.inf, dtype=dt)) + assert_raises(FloatingPointError, np.log10, + np.array(-1.0, dtype=dt)) + assert_raises(FloatingPointError, np.log1p, + np.array(-np.inf, dtype=dt)) + assert_raises(FloatingPointError, np.log1p, + np.array(-2.0, dtype=dt)) + + # See https://github.com/numpy/numpy/issues/18005 + with assert_no_warnings(): + a = np.array(1e9, dtype='float32') + np.log(a) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.parametrize('dtype', ['e', 'f', 'd', 'g']) + def test_sincos_values(self, dtype): + with np.errstate(all='ignore'): + x = [np.nan, np.nan, np.nan, np.nan] + y = [np.nan, -np.nan, np.inf, -np.inf] + xf = np.array(x, dtype=dtype) + yf = np.array(y, dtype=dtype) + assert_equal(np.sin(yf), xf) + assert_equal(np.cos(yf), xf) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.xfail( + sys.platform.startswith("darwin"), + reason="underflow is triggered for scalar 'sin'" + ) + def test_sincos_underflow(self): + with np.errstate(under='raise'): + underflow_trigger = np.array( + float.fromhex("0x1.f37f47a03f82ap-511"), + dtype=np.float64 + ) + np.sin(underflow_trigger) + np.cos(underflow_trigger) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.parametrize('callable', [np.sin, np.cos]) + @pytest.mark.parametrize('dtype', ['e', 'f', 'd']) + @pytest.mark.parametrize('value', [np.inf, -np.inf]) + def test_sincos_errors(self, callable, dtype, value): + with np.errstate(invalid='raise'): + assert_raises(FloatingPointError, callable, + np.array([value], dtype=dtype)) + + @pytest.mark.parametrize('callable', [np.sin, np.cos]) + @pytest.mark.parametrize('dtype', ['f', 'd']) + @pytest.mark.parametrize('stride', [-1, 1, 2, 4, 5]) + def test_sincos_overlaps(self, callable, dtype, stride): + N = 100 + M = N // abs(stride) + rng = np.random.default_rng(42) + x = rng.standard_normal(N, dtype) + y = callable(x[::stride]) + callable(x[::stride], out=x[:M]) + assert_equal(x[:M], y) + + @pytest.mark.parametrize('dt', ['e', 'f', 'd', 'g']) + def test_sqrt_values(self, dt): + with np.errstate(all='ignore'): + x = [np.nan, np.nan, np.inf, np.nan, 0.] + y = [np.nan, -np.nan, np.inf, -np.inf, 0.] + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt) + assert_equal(np.sqrt(yf), xf) + + # with np.errstate(invalid='raise'): + # assert_raises( + # FloatingPointError, np.sqrt, np.array(-100., dtype=dt) + # ) + + def test_abs_values(self): + x = [np.nan, np.nan, np.inf, np.inf, 0., 0., 1.0, 1.0] + y = [np.nan, -np.nan, np.inf, -np.inf, 0., -0., -1.0, 1.0] + for dt in ['e', 'f', 'd', 'g']: + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt) + assert_equal(np.abs(yf), xf) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_square_values(self): + x = [np.nan, np.nan, np.inf, np.inf] + y = [np.nan, -np.nan, np.inf, -np.inf] + with np.errstate(all='ignore'): + for dt in ['e', 'f', 'd', 'g']: + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt) + assert_equal(np.square(yf), xf) + + with np.errstate(over='raise'): + assert_raises(FloatingPointError, np.square, + np.array(1E3, dtype='e')) + assert_raises(FloatingPointError, np.square, + np.array(1E32, dtype='f')) + assert_raises(FloatingPointError, np.square, + np.array(1E200, dtype='d')) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_reciprocal_values(self): + with np.errstate(all='ignore'): + x = [np.nan, np.nan, 0.0, -0.0, np.inf, -np.inf] + y = [np.nan, -np.nan, np.inf, -np.inf, 0., -0.] + for dt in ['e', 'f', 'd', 'g']: + xf = np.array(x, dtype=dt) + yf = np.array(y, dtype=dt) + assert_equal(np.reciprocal(yf), xf) + + with np.errstate(divide='raise'): + for dt in ['e', 'f', 'd', 'g']: + assert_raises(FloatingPointError, np.reciprocal, + np.array(-0.0, dtype=dt)) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_tan(self): + with np.errstate(all='ignore'): + in_ = [np.nan, -np.nan, 0.0, -0.0, np.inf, -np.inf] + out = [np.nan, np.nan, 0.0, -0.0, np.nan, np.nan] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.tan(in_arr), out_arr) + + with np.errstate(invalid='raise'): + for dt in ['e', 'f', 'd']: + assert_raises(FloatingPointError, np.tan, + np.array(np.inf, dtype=dt)) + assert_raises(FloatingPointError, np.tan, + np.array(-np.inf, dtype=dt)) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_arcsincos(self): + with np.errstate(all='ignore'): + in_ = [np.nan, -np.nan, np.inf, -np.inf] + out = [np.nan, np.nan, np.nan, np.nan] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.arcsin(in_arr), out_arr) + assert_equal(np.arccos(in_arr), out_arr) + + for callable in [np.arcsin, np.arccos]: + for value in [np.inf, -np.inf, 2.0, -2.0]: + for dt in ['e', 'f', 'd']: + with np.errstate(invalid='raise'): + assert_raises(FloatingPointError, callable, + np.array(value, dtype=dt)) + + def test_arctan(self): + with np.errstate(all='ignore'): + in_ = [np.nan, -np.nan] + out = [np.nan, np.nan] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.arctan(in_arr), out_arr) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_sinh(self): + in_ = [np.nan, -np.nan, np.inf, -np.inf] + out = [np.nan, np.nan, np.inf, -np.inf] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.sinh(in_arr), out_arr) + + with np.errstate(over='raise'): + assert_raises(FloatingPointError, np.sinh, + np.array(12.0, dtype='e')) + assert_raises(FloatingPointError, np.sinh, + np.array(120.0, dtype='f')) + assert_raises(FloatingPointError, np.sinh, + np.array(1200.0, dtype='d')) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + @pytest.mark.skipif('bsd' in sys.platform, + reason="fallback implementation may not raise, see gh-2487") + def test_cosh(self): + in_ = [np.nan, -np.nan, np.inf, -np.inf] + out = [np.nan, np.nan, np.inf, np.inf] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.cosh(in_arr), out_arr) + + with np.errstate(over='raise'): + assert_raises(FloatingPointError, np.cosh, + np.array(12.0, dtype='e')) + assert_raises(FloatingPointError, np.cosh, + np.array(120.0, dtype='f')) + assert_raises(FloatingPointError, np.cosh, + np.array(1200.0, dtype='d')) + + def test_tanh(self): + in_ = [np.nan, -np.nan, np.inf, -np.inf] + out = [np.nan, np.nan, 1.0, -1.0] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_array_max_ulp(np.tanh(in_arr), out_arr, 3) + + def test_arcsinh(self): + in_ = [np.nan, -np.nan, np.inf, -np.inf] + out = [np.nan, np.nan, np.inf, -np.inf] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.arcsinh(in_arr), out_arr) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_arccosh(self): + with np.errstate(all='ignore'): + in_ = [np.nan, -np.nan, np.inf, -np.inf, 1.0, 0.0] + out = [np.nan, np.nan, np.inf, np.nan, 0.0, np.nan] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.arccosh(in_arr), out_arr) + + for value in [0.0, -np.inf]: + with np.errstate(invalid='raise'): + for dt in ['e', 'f', 'd']: + assert_raises(FloatingPointError, np.arccosh, + np.array(value, dtype=dt)) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_arctanh(self): + with np.errstate(all='ignore'): + in_ = [np.nan, -np.nan, np.inf, -np.inf, 1.0, -1.0, 2.0] + out = [np.nan, np.nan, np.nan, np.nan, np.inf, -np.inf, np.nan] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.arctanh(in_arr), out_arr) + + for value in [1.01, np.inf, -np.inf, 1.0, -1.0]: + with np.errstate(invalid='raise', divide='raise'): + for dt in ['e', 'f', 'd']: + assert_raises(FloatingPointError, np.arctanh, + np.array(value, dtype=dt)) + + # Make sure glibc < 2.18 atanh is not used, issue 25087 + assert np.signbit(np.arctanh(-1j).real) + + # See: https://github.com/numpy/numpy/issues/20448 + @pytest.mark.xfail( + _glibc_older_than("2.17"), + reason="Older glibc versions may not raise appropriate FP exceptions" + ) + def test_exp2(self): + with np.errstate(all='ignore'): + in_ = [np.nan, -np.nan, np.inf, -np.inf] + out = [np.nan, np.nan, np.inf, 0.0] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.exp2(in_arr), out_arr) + + for value in [2000.0, -2000.0]: + with np.errstate(over='raise', under='raise'): + for dt in ['e', 'f', 'd']: + assert_raises(FloatingPointError, np.exp2, + np.array(value, dtype=dt)) + + @pytest.mark.skipif(IS_WASM, reason="fp errors don't work in wasm") + def test_expm1(self): + with np.errstate(all='ignore'): + in_ = [np.nan, -np.nan, np.inf, -np.inf] + out = [np.nan, np.nan, np.inf, -1.0] + for dt in ['e', 'f', 'd']: + in_arr = np.array(in_, dtype=dt) + out_arr = np.array(out, dtype=dt) + assert_equal(np.expm1(in_arr), out_arr) + + for value in [200.0, 2000.0]: + with np.errstate(over='raise'): + for dt in ['e', 'f']: + assert_raises(FloatingPointError, np.expm1, + np.array(value, dtype=dt)) + + # test to ensure no spurious FP exceptions are raised due to SIMD + INF_INVALID_ERR = [ + np.cos, np.sin, np.tan, np.arccos, np.arcsin, np.spacing, np.arctanh + ] + NEG_INVALID_ERR = [ + np.log, np.log2, np.log10, np.log1p, np.sqrt, np.arccosh, + np.arctanh + ] + ONE_INVALID_ERR = [ + np.arctanh, + ] + LTONE_INVALID_ERR = [ + np.arccosh, + ] + BYZERO_ERR = [ + np.log, np.log2, np.log10, np.reciprocal, np.arccosh + ] + + @pytest.mark.parametrize("ufunc", UFUNCS_UNARY_FP) + @pytest.mark.parametrize("dtype", ('e', 'f', 'd')) + @pytest.mark.parametrize("data, escape", ( + ([0.03], LTONE_INVALID_ERR), + ([0.03]*32, LTONE_INVALID_ERR), + # neg + ([-1.0], NEG_INVALID_ERR), + ([-1.0]*32, NEG_INVALID_ERR), + # flat + ([1.0], ONE_INVALID_ERR), + ([1.0]*32, ONE_INVALID_ERR), + # zero + ([0.0], BYZERO_ERR), + ([0.0]*32, BYZERO_ERR), + ([-0.0], BYZERO_ERR), + ([-0.0]*32, BYZERO_ERR), + # nan + ([0.5, 0.5, 0.5, np.nan], LTONE_INVALID_ERR), + ([0.5, 0.5, 0.5, np.nan]*32, LTONE_INVALID_ERR), + ([np.nan, 1.0, 1.0, 1.0], ONE_INVALID_ERR), + ([np.nan, 1.0, 1.0, 1.0]*32, ONE_INVALID_ERR), + ([np.nan], []), + ([np.nan]*32, []), + # inf + ([0.5, 0.5, 0.5, np.inf], INF_INVALID_ERR + LTONE_INVALID_ERR), + ([0.5, 0.5, 0.5, np.inf]*32, INF_INVALID_ERR + LTONE_INVALID_ERR), + ([np.inf, 1.0, 1.0, 1.0], INF_INVALID_ERR), + ([np.inf, 1.0, 1.0, 1.0]*32, INF_INVALID_ERR), + ([np.inf], INF_INVALID_ERR), + ([np.inf]*32, INF_INVALID_ERR), + # ninf + ([0.5, 0.5, 0.5, -np.inf], + NEG_INVALID_ERR + INF_INVALID_ERR + LTONE_INVALID_ERR), + ([0.5, 0.5, 0.5, -np.inf]*32, + NEG_INVALID_ERR + INF_INVALID_ERR + LTONE_INVALID_ERR), + ([-np.inf, 1.0, 1.0, 1.0], NEG_INVALID_ERR + INF_INVALID_ERR), + ([-np.inf, 1.0, 1.0, 1.0]*32, NEG_INVALID_ERR + INF_INVALID_ERR), + ([-np.inf], NEG_INVALID_ERR + INF_INVALID_ERR), + ([-np.inf]*32, NEG_INVALID_ERR + INF_INVALID_ERR), + )) + def test_unary_spurious_fpexception(self, ufunc, dtype, data, escape): + if escape and ufunc in escape: + return + # FIXME: NAN raises FP invalid exception: + # - ceil/float16 on MSVC:32-bit + # - spacing/float16 on almost all platforms + if ufunc in (np.spacing, np.ceil) and dtype == 'e': + return + array = np.array(data, dtype=dtype) + with assert_no_warnings(): + ufunc(array) + + @pytest.mark.parametrize("dtype", ('e', 'f', 'd')) + def test_divide_spurious_fpexception(self, dtype): + dt = np.dtype(dtype) + dt_info = np.finfo(dt) + subnorm = dt_info.smallest_subnormal + # Verify a bug fix caused due to filling the remaining lanes of the + # partially loaded dividend SIMD vector with ones, which leads to + # raising an overflow warning when the divisor is denormal. + # see https://github.com/numpy/numpy/issues/25097 + with assert_no_warnings(): + np.zeros(128 + 1, dtype=dt) / subnorm + +class TestFPClass: + @pytest.mark.parametrize("stride", [-5, -4, -3, -2, -1, 1, + 2, 4, 5, 6, 7, 8, 9, 10]) + def test_fpclass(self, stride): + arr_f64 = np.array([np.nan, -np.nan, np.inf, -np.inf, -1.0, 1.0, -0.0, 0.0, 2.2251e-308, -2.2251e-308], dtype='d') + arr_f32 = np.array([np.nan, -np.nan, np.inf, -np.inf, -1.0, 1.0, -0.0, 0.0, 1.4013e-045, -1.4013e-045], dtype='f') + nan = np.array([True, True, False, False, False, False, False, False, False, False]) + inf = np.array([False, False, True, True, False, False, False, False, False, False]) + sign = np.array([False, True, False, True, True, False, True, False, False, True]) + finite = np.array([False, False, False, False, True, True, True, True, True, True]) + assert_equal(np.isnan(arr_f32[::stride]), nan[::stride]) + assert_equal(np.isnan(arr_f64[::stride]), nan[::stride]) + assert_equal(np.isinf(arr_f32[::stride]), inf[::stride]) + assert_equal(np.isinf(arr_f64[::stride]), inf[::stride]) + if platform.processor() == 'riscv64': + # On RISC-V, many operations that produce NaNs, such as converting + # a -NaN from f64 to f32, return a canonical NaN. The canonical + # NaNs are always positive. See section 11.3 NaN Generation and + # Propagation of the RISC-V Unprivileged ISA for more details. + # We disable the sign test on riscv64 for -np.nan as we + # cannot assume that its sign will be honoured in these tests. + arr_f64_rv = np.copy(arr_f64) + arr_f32_rv = np.copy(arr_f32) + arr_f64_rv[1] = -1.0 + arr_f32_rv[1] = -1.0 + assert_equal(np.signbit(arr_f32_rv[::stride]), sign[::stride]) + assert_equal(np.signbit(arr_f64_rv[::stride]), sign[::stride]) + else: + assert_equal(np.signbit(arr_f32[::stride]), sign[::stride]) + assert_equal(np.signbit(arr_f64[::stride]), sign[::stride]) + assert_equal(np.isfinite(arr_f32[::stride]), finite[::stride]) + assert_equal(np.isfinite(arr_f64[::stride]), finite[::stride]) + + @pytest.mark.parametrize("dtype", ['d', 'f']) + def test_fp_noncontiguous(self, dtype): + data = np.array([np.nan, -np.nan, np.inf, -np.inf, -1.0, + 1.0, -0.0, 0.0, 2.2251e-308, + -2.2251e-308], dtype=dtype) + nan = np.array([True, True, False, False, False, False, + False, False, False, False]) + inf = np.array([False, False, True, True, False, False, + False, False, False, False]) + sign = np.array([False, True, False, True, True, False, + True, False, False, True]) + finite = np.array([False, False, False, False, True, True, + True, True, True, True]) + out = np.ndarray(data.shape, dtype='bool') + ncontig_in = data[1::3] + ncontig_out = out[1::3] + contig_in = np.array(ncontig_in) + + if platform.processor() == 'riscv64': + # Disable the -np.nan signbit tests on riscv64. See comments in + # test_fpclass for more details. + data_rv = np.copy(data) + data_rv[1] = -1.0 + ncontig_sign_in = data_rv[1::3] + contig_sign_in = np.array(ncontig_sign_in) + else: + ncontig_sign_in = ncontig_in + contig_sign_in = contig_in + + assert_equal(ncontig_in.flags.c_contiguous, False) + assert_equal(ncontig_out.flags.c_contiguous, False) + assert_equal(contig_in.flags.c_contiguous, True) + assert_equal(ncontig_sign_in.flags.c_contiguous, False) + assert_equal(contig_sign_in.flags.c_contiguous, True) + # ncontig in, ncontig out + assert_equal(np.isnan(ncontig_in, out=ncontig_out), nan[1::3]) + assert_equal(np.isinf(ncontig_in, out=ncontig_out), inf[1::3]) + assert_equal(np.signbit(ncontig_sign_in, out=ncontig_out), sign[1::3]) + assert_equal(np.isfinite(ncontig_in, out=ncontig_out), finite[1::3]) + # contig in, ncontig out + assert_equal(np.isnan(contig_in, out=ncontig_out), nan[1::3]) + assert_equal(np.isinf(contig_in, out=ncontig_out), inf[1::3]) + assert_equal(np.signbit(contig_sign_in, out=ncontig_out), sign[1::3]) + assert_equal(np.isfinite(contig_in, out=ncontig_out), finite[1::3]) + # ncontig in, contig out + assert_equal(np.isnan(ncontig_in), nan[1::3]) + assert_equal(np.isinf(ncontig_in), inf[1::3]) + assert_equal(np.signbit(ncontig_sign_in), sign[1::3]) + assert_equal(np.isfinite(ncontig_in), finite[1::3]) + # contig in, contig out, nd stride + data_split = np.array(np.array_split(data, 2)) + nan_split = np.array(np.array_split(nan, 2)) + inf_split = np.array(np.array_split(inf, 2)) + sign_split = np.array(np.array_split(sign, 2)) + finite_split = np.array(np.array_split(finite, 2)) + assert_equal(np.isnan(data_split), nan_split) + assert_equal(np.isinf(data_split), inf_split) + if platform.processor() == 'riscv64': + data_split_rv = np.array(np.array_split(data_rv, 2)) + assert_equal(np.signbit(data_split_rv), sign_split) + else: + assert_equal(np.signbit(data_split), sign_split) + assert_equal(np.isfinite(data_split), finite_split) + +class TestLDExp: + @pytest.mark.parametrize("stride", [-4,-2,-1,1,2,4]) + @pytest.mark.parametrize("dtype", ['f', 'd']) + def test_ldexp(self, dtype, stride): + mant = np.array([0.125, 0.25, 0.5, 1., 1., 2., 4., 8.], dtype=dtype) + exp = np.array([3, 2, 1, 0, 0, -1, -2, -3], dtype='i') + out = np.zeros(8, dtype=dtype) + assert_equal(np.ldexp(mant[::stride], exp[::stride], out=out[::stride]), np.ones(8, dtype=dtype)[::stride]) + assert_equal(out[::stride], np.ones(8, dtype=dtype)[::stride]) + +class TestFRExp: + @pytest.mark.parametrize("stride", [-4,-2,-1,1,2,4]) + @pytest.mark.parametrize("dtype", ['f', 'd']) + @pytest.mark.skipif(not sys.platform.startswith('linux'), + reason="np.frexp gives different answers for NAN/INF on windows and linux") + @pytest.mark.xfail(IS_MUSL, reason="gh23049") + def test_frexp(self, dtype, stride): + arr = np.array([np.nan, np.nan, np.inf, -np.inf, 0.0, -0.0, 1.0, -1.0], dtype=dtype) + mant_true = np.array([np.nan, np.nan, np.inf, -np.inf, 0.0, -0.0, 0.5, -0.5], dtype=dtype) + exp_true = np.array([0, 0, 0, 0, 0, 0, 1, 1], dtype='i') + out_mant = np.ones(8, dtype=dtype) + out_exp = 2*np.ones(8, dtype='i') + mant, exp = np.frexp(arr[::stride], out=(out_mant[::stride], out_exp[::stride])) + assert_equal(mant_true[::stride], mant) + assert_equal(exp_true[::stride], exp) + assert_equal(out_mant[::stride], mant_true[::stride]) + assert_equal(out_exp[::stride], exp_true[::stride]) + +# func : [maxulperror, low, high] +avx_ufuncs = {'sqrt' :[1, 0., 100.], + 'absolute' :[0, -100., 100.], + 'reciprocal' :[1, 1., 100.], + 'square' :[1, -100., 100.], + 'rint' :[0, -100., 100.], + 'floor' :[0, -100., 100.], + 'ceil' :[0, -100., 100.], + 'trunc' :[0, -100., 100.]} + +class TestAVXUfuncs: + def test_avx_based_ufunc(self): + strides = np.array([-4,-3,-2,-1,1,2,3,4]) + np.random.seed(42) + for func, prop in avx_ufuncs.items(): + maxulperr = prop[0] + minval = prop[1] + maxval = prop[2] + # various array sizes to ensure masking in AVX is tested + for size in range(1,32): + myfunc = getattr(np, func) + x_f32 = np.random.uniform(low=minval, high=maxval, + size=size).astype(np.float32) + x_f64 = x_f32.astype(np.float64) + x_f128 = x_f32.astype(np.longdouble) + y_true128 = myfunc(x_f128) + if maxulperr == 0: + assert_equal(myfunc(x_f32), y_true128.astype(np.float32)) + assert_equal(myfunc(x_f64), y_true128.astype(np.float64)) + else: + assert_array_max_ulp(myfunc(x_f32), + y_true128.astype(np.float32), + maxulp=maxulperr) + assert_array_max_ulp(myfunc(x_f64), + y_true128.astype(np.float64), + maxulp=maxulperr) + # various strides to test gather instruction + if size > 1: + y_true32 = myfunc(x_f32) + y_true64 = myfunc(x_f64) + for jj in strides: + assert_equal(myfunc(x_f64[::jj]), y_true64[::jj]) + assert_equal(myfunc(x_f32[::jj]), y_true32[::jj]) + +class TestAVXFloat32Transcendental: + def test_exp_float32(self): + np.random.seed(42) + x_f32 = np.float32(np.random.uniform(low=0.0,high=88.1,size=1000000)) + x_f64 = np.float64(x_f32) + assert_array_max_ulp(np.exp(x_f32), np.float32(np.exp(x_f64)), maxulp=3) + + def test_log_float32(self): + np.random.seed(42) + x_f32 = np.float32(np.random.uniform(low=0.0,high=1000,size=1000000)) + x_f64 = np.float64(x_f32) + assert_array_max_ulp(np.log(x_f32), np.float32(np.log(x_f64)), maxulp=4) + + def test_sincos_float32(self): + np.random.seed(42) + N = 1000000 + M = np.int_(N/20) + index = np.random.randint(low=0, high=N, size=M) + x_f32 = np.float32(np.random.uniform(low=-100.,high=100.,size=N)) + if not _glibc_older_than("2.17"): + # test coverage for elements > 117435.992f for which glibc is used + # this is known to be problematic on old glibc, so skip it there + x_f32[index] = np.float32(10E+10*np.random.rand(M)) + x_f64 = np.float64(x_f32) + assert_array_max_ulp(np.sin(x_f32), np.float32(np.sin(x_f64)), maxulp=2) + assert_array_max_ulp(np.cos(x_f32), np.float32(np.cos(x_f64)), maxulp=2) + # test aliasing(issue #17761) + tx_f32 = x_f32.copy() + assert_array_max_ulp(np.sin(x_f32, out=x_f32), np.float32(np.sin(x_f64)), maxulp=2) + assert_array_max_ulp(np.cos(tx_f32, out=tx_f32), np.float32(np.cos(x_f64)), maxulp=2) + + def test_strided_float32(self): + np.random.seed(42) + strides = np.array([-4,-3,-2,-1,1,2,3,4]) + sizes = np.arange(2,100) + for ii in sizes: + x_f32 = np.float32(np.random.uniform(low=0.01,high=88.1,size=ii)) + x_f32_large = x_f32.copy() + x_f32_large[3:-1:4] = 120000.0 + exp_true = np.exp(x_f32) + log_true = np.log(x_f32) + sin_true = np.sin(x_f32_large) + cos_true = np.cos(x_f32_large) + for jj in strides: + assert_array_almost_equal_nulp(np.exp(x_f32[::jj]), exp_true[::jj], nulp=2) + assert_array_almost_equal_nulp(np.log(x_f32[::jj]), log_true[::jj], nulp=2) + assert_array_almost_equal_nulp(np.sin(x_f32_large[::jj]), sin_true[::jj], nulp=2) + assert_array_almost_equal_nulp(np.cos(x_f32_large[::jj]), cos_true[::jj], nulp=2) + +class TestLogAddExp(_FilterInvalids): + def test_logaddexp_values(self): + x = [1, 2, 3, 4, 5] + y = [5, 4, 3, 2, 1] + z = [6, 6, 6, 6, 6] + for dt, dec_ in zip(['f', 'd', 'g'], [6, 15, 15]): + xf = np.log(np.array(x, dtype=dt)) + yf = np.log(np.array(y, dtype=dt)) + zf = np.log(np.array(z, dtype=dt)) + assert_almost_equal(np.logaddexp(xf, yf), zf, decimal=dec_) + + def test_logaddexp_range(self): + x = [1000000, -1000000, 1000200, -1000200] + y = [1000200, -1000200, 1000000, -1000000] + z = [1000200, -1000000, 1000200, -1000000] + for dt in ['f', 'd', 'g']: + logxf = np.array(x, dtype=dt) + logyf = np.array(y, dtype=dt) + logzf = np.array(z, dtype=dt) + assert_almost_equal(np.logaddexp(logxf, logyf), logzf) + + def test_inf(self): + inf = np.inf + x = [inf, -inf, inf, -inf, inf, 1, -inf, 1] + y = [inf, inf, -inf, -inf, 1, inf, 1, -inf] + z = [inf, inf, inf, -inf, inf, inf, 1, 1] + with np.errstate(invalid='raise'): + for dt in ['f', 'd', 'g']: + logxf = np.array(x, dtype=dt) + logyf = np.array(y, dtype=dt) + logzf = np.array(z, dtype=dt) + assert_equal(np.logaddexp(logxf, logyf), logzf) + + def test_nan(self): + assert_(np.isnan(np.logaddexp(np.nan, np.inf))) + assert_(np.isnan(np.logaddexp(np.inf, np.nan))) + assert_(np.isnan(np.logaddexp(np.nan, 0))) + assert_(np.isnan(np.logaddexp(0, np.nan))) + assert_(np.isnan(np.logaddexp(np.nan, np.nan))) + + def test_reduce(self): + assert_equal(np.logaddexp.identity, -np.inf) + assert_equal(np.logaddexp.reduce([]), -np.inf) + + +class TestLog1p: + def test_log1p(self): + assert_almost_equal(ncu.log1p(0.2), ncu.log(1.2)) + assert_almost_equal(ncu.log1p(1e-6), ncu.log(1+1e-6)) + + def test_special(self): + with np.errstate(invalid="ignore", divide="ignore"): + assert_equal(ncu.log1p(np.nan), np.nan) + assert_equal(ncu.log1p(np.inf), np.inf) + assert_equal(ncu.log1p(-1.), -np.inf) + assert_equal(ncu.log1p(-2.), np.nan) + assert_equal(ncu.log1p(-np.inf), np.nan) + + +class TestExpm1: + def test_expm1(self): + assert_almost_equal(ncu.expm1(0.2), ncu.exp(0.2)-1) + assert_almost_equal(ncu.expm1(1e-6), ncu.exp(1e-6)-1) + + def test_special(self): + assert_equal(ncu.expm1(np.inf), np.inf) + assert_equal(ncu.expm1(0.), 0.) + assert_equal(ncu.expm1(-0.), -0.) + assert_equal(ncu.expm1(np.inf), np.inf) + assert_equal(ncu.expm1(-np.inf), -1.) + + def test_complex(self): + x = np.asarray(1e-12) + assert_allclose(x, ncu.expm1(x)) + x = x.astype(np.complex128) + assert_allclose(x, ncu.expm1(x)) + + +class TestHypot: + def test_simple(self): + assert_almost_equal(ncu.hypot(1, 1), ncu.sqrt(2)) + assert_almost_equal(ncu.hypot(0, 0), 0) + + def test_reduce(self): + assert_almost_equal(ncu.hypot.reduce([3.0, 4.0]), 5.0) + assert_almost_equal(ncu.hypot.reduce([3.0, 4.0, 0]), 5.0) + assert_almost_equal(ncu.hypot.reduce([9.0, 12.0, 20.0]), 25.0) + assert_equal(ncu.hypot.reduce([]), 0.0) + + +def assert_hypot_isnan(x, y): + with np.errstate(invalid='ignore'): + assert_(np.isnan(ncu.hypot(x, y)), + "hypot(%s, %s) is %s, not nan" % (x, y, ncu.hypot(x, y))) + + +def assert_hypot_isinf(x, y): + with np.errstate(invalid='ignore'): + assert_(np.isinf(ncu.hypot(x, y)), + "hypot(%s, %s) is %s, not inf" % (x, y, ncu.hypot(x, y))) + + +class TestHypotSpecialValues: + def test_nan_outputs(self): + assert_hypot_isnan(np.nan, np.nan) + assert_hypot_isnan(np.nan, 1) + + def test_nan_outputs2(self): + assert_hypot_isinf(np.nan, np.inf) + assert_hypot_isinf(np.inf, np.nan) + assert_hypot_isinf(np.inf, 0) + assert_hypot_isinf(0, np.inf) + assert_hypot_isinf(np.inf, np.inf) + assert_hypot_isinf(np.inf, 23.0) + + def test_no_fpe(self): + assert_no_warnings(ncu.hypot, np.inf, 0) + + +def assert_arctan2_isnan(x, y): + assert_(np.isnan(ncu.arctan2(x, y)), "arctan(%s, %s) is %s, not nan" % (x, y, ncu.arctan2(x, y))) + + +def assert_arctan2_ispinf(x, y): + assert_((np.isinf(ncu.arctan2(x, y)) and ncu.arctan2(x, y) > 0), "arctan(%s, %s) is %s, not +inf" % (x, y, ncu.arctan2(x, y))) + + +def assert_arctan2_isninf(x, y): + assert_((np.isinf(ncu.arctan2(x, y)) and ncu.arctan2(x, y) < 0), "arctan(%s, %s) is %s, not -inf" % (x, y, ncu.arctan2(x, y))) + + +def assert_arctan2_ispzero(x, y): + assert_((ncu.arctan2(x, y) == 0 and not np.signbit(ncu.arctan2(x, y))), "arctan(%s, %s) is %s, not +0" % (x, y, ncu.arctan2(x, y))) + + +def assert_arctan2_isnzero(x, y): + assert_((ncu.arctan2(x, y) == 0 and np.signbit(ncu.arctan2(x, y))), "arctan(%s, %s) is %s, not -0" % (x, y, ncu.arctan2(x, y))) + + +class TestArctan2SpecialValues: + def test_one_one(self): + # atan2(1, 1) returns pi/4. + assert_almost_equal(ncu.arctan2(1, 1), 0.25 * np.pi) + assert_almost_equal(ncu.arctan2(-1, 1), -0.25 * np.pi) + assert_almost_equal(ncu.arctan2(1, -1), 0.75 * np.pi) + + def test_zero_nzero(self): + # atan2(+-0, -0) returns +-pi. + assert_almost_equal(ncu.arctan2(ncu.PZERO, ncu.NZERO), np.pi) + assert_almost_equal(ncu.arctan2(ncu.NZERO, ncu.NZERO), -np.pi) + + def test_zero_pzero(self): + # atan2(+-0, +0) returns +-0. + assert_arctan2_ispzero(ncu.PZERO, ncu.PZERO) + assert_arctan2_isnzero(ncu.NZERO, ncu.PZERO) + + def test_zero_negative(self): + # atan2(+-0, x) returns +-pi for x < 0. + assert_almost_equal(ncu.arctan2(ncu.PZERO, -1), np.pi) + assert_almost_equal(ncu.arctan2(ncu.NZERO, -1), -np.pi) + + def test_zero_positive(self): + # atan2(+-0, x) returns +-0 for x > 0. + assert_arctan2_ispzero(ncu.PZERO, 1) + assert_arctan2_isnzero(ncu.NZERO, 1) + + def test_positive_zero(self): + # atan2(y, +-0) returns +pi/2 for y > 0. + assert_almost_equal(ncu.arctan2(1, ncu.PZERO), 0.5 * np.pi) + assert_almost_equal(ncu.arctan2(1, ncu.NZERO), 0.5 * np.pi) + + def test_negative_zero(self): + # atan2(y, +-0) returns -pi/2 for y < 0. + assert_almost_equal(ncu.arctan2(-1, ncu.PZERO), -0.5 * np.pi) + assert_almost_equal(ncu.arctan2(-1, ncu.NZERO), -0.5 * np.pi) + + def test_any_ninf(self): + # atan2(+-y, -infinity) returns +-pi for finite y > 0. + assert_almost_equal(ncu.arctan2(1, -np.inf), np.pi) + assert_almost_equal(ncu.arctan2(-1, -np.inf), -np.pi) + + def test_any_pinf(self): + # atan2(+-y, +infinity) returns +-0 for finite y > 0. + assert_arctan2_ispzero(1, np.inf) + assert_arctan2_isnzero(-1, np.inf) + + def test_inf_any(self): + # atan2(+-infinity, x) returns +-pi/2 for finite x. + assert_almost_equal(ncu.arctan2( np.inf, 1), 0.5 * np.pi) + assert_almost_equal(ncu.arctan2(-np.inf, 1), -0.5 * np.pi) + + def test_inf_ninf(self): + # atan2(+-infinity, -infinity) returns +-3*pi/4. + assert_almost_equal(ncu.arctan2( np.inf, -np.inf), 0.75 * np.pi) + assert_almost_equal(ncu.arctan2(-np.inf, -np.inf), -0.75 * np.pi) + + def test_inf_pinf(self): + # atan2(+-infinity, +infinity) returns +-pi/4. + assert_almost_equal(ncu.arctan2( np.inf, np.inf), 0.25 * np.pi) + assert_almost_equal(ncu.arctan2(-np.inf, np.inf), -0.25 * np.pi) + + def test_nan_any(self): + # atan2(nan, x) returns nan for any x, including inf + assert_arctan2_isnan(np.nan, np.inf) + assert_arctan2_isnan(np.inf, np.nan) + assert_arctan2_isnan(np.nan, np.nan) + + +class TestLdexp: + def _check_ldexp(self, tp): + assert_almost_equal(ncu.ldexp(np.array(2., np.float32), + np.array(3, tp)), 16.) + assert_almost_equal(ncu.ldexp(np.array(2., np.float64), + np.array(3, tp)), 16.) + assert_almost_equal(ncu.ldexp(np.array(2., np.longdouble), + np.array(3, tp)), 16.) + + def test_ldexp(self): + # The default Python int type should work + assert_almost_equal(ncu.ldexp(2., 3), 16.) + # The following int types should all be accepted + self._check_ldexp(np.int8) + self._check_ldexp(np.int16) + self._check_ldexp(np.int32) + self._check_ldexp('i') + self._check_ldexp('l') + + def test_ldexp_overflow(self): + # silence warning emitted on overflow + with np.errstate(over="ignore"): + imax = np.iinfo(np.dtype('l')).max + imin = np.iinfo(np.dtype('l')).min + assert_equal(ncu.ldexp(2., imax), np.inf) + assert_equal(ncu.ldexp(2., imin), 0) + + +class TestMaximum(_FilterInvalids): + def test_reduce(self): + dflt = np.typecodes['AllFloat'] + dint = np.typecodes['AllInteger'] + seq1 = np.arange(11) + seq2 = seq1[::-1] + func = np.maximum.reduce + for dt in dint: + tmp1 = seq1.astype(dt) + tmp2 = seq2.astype(dt) + assert_equal(func(tmp1), 10) + assert_equal(func(tmp2), 10) + for dt in dflt: + tmp1 = seq1.astype(dt) + tmp2 = seq2.astype(dt) + assert_equal(func(tmp1), 10) + assert_equal(func(tmp2), 10) + tmp1[::2] = np.nan + tmp2[::2] = np.nan + assert_equal(func(tmp1), np.nan) + assert_equal(func(tmp2), np.nan) + + def test_reduce_complex(self): + assert_equal(np.maximum.reduce([1, 2j]), 1) + assert_equal(np.maximum.reduce([1+3j, 2j]), 1+3j) + + def test_float_nans(self): + nan = np.nan + arg1 = np.array([0, nan, nan]) + arg2 = np.array([nan, 0, nan]) + out = np.array([nan, nan, nan]) + assert_equal(np.maximum(arg1, arg2), out) + + def test_object_nans(self): + # Multiple checks to give this a chance to + # fail if cmp is used instead of rich compare. + # Failure cannot be guaranteed. + for i in range(1): + x = np.array(float('nan'), object) + y = 1.0 + z = np.array(float('nan'), object) + assert_(np.maximum(x, y) == 1.0) + assert_(np.maximum(z, y) == 1.0) + + def test_complex_nans(self): + nan = np.nan + for cnan in [complex(nan, 0), complex(0, nan), complex(nan, nan)]: + arg1 = np.array([0, cnan, cnan], dtype=complex) + arg2 = np.array([cnan, 0, cnan], dtype=complex) + out = np.array([nan, nan, nan], dtype=complex) + assert_equal(np.maximum(arg1, arg2), out) + + def test_object_array(self): + arg1 = np.arange(5, dtype=object) + arg2 = arg1 + 1 + assert_equal(np.maximum(arg1, arg2), arg2) + + def test_strided_array(self): + arr1 = np.array([-4.0, 1.0, 10.0, 0.0, np.nan, -np.nan, np.inf, -np.inf]) + arr2 = np.array([-2.0,-1.0, np.nan, 1.0, 0.0, np.nan, 1.0, -3.0]) + maxtrue = np.array([-2.0, 1.0, np.nan, 1.0, np.nan, np.nan, np.inf, -3.0]) + out = np.ones(8) + out_maxtrue = np.array([-2.0, 1.0, 1.0, 10.0, 1.0, 1.0, np.nan, 1.0]) + assert_equal(np.maximum(arr1,arr2), maxtrue) + assert_equal(np.maximum(arr1[::2],arr2[::2]), maxtrue[::2]) + assert_equal(np.maximum(arr1[:4:], arr2[::2]), np.array([-2.0, np.nan, 10.0, 1.0])) + assert_equal(np.maximum(arr1[::3], arr2[:3:]), np.array([-2.0, 0.0, np.nan])) + assert_equal(np.maximum(arr1[:6:2], arr2[::3], out=out[::3]), np.array([-2.0, 10., np.nan])) + assert_equal(out, out_maxtrue) + + def test_precision(self): + dtypes = [np.float16, np.float32, np.float64, np.longdouble] + + for dt in dtypes: + dtmin = np.finfo(dt).min + dtmax = np.finfo(dt).max + d1 = dt(0.1) + d1_next = np.nextafter(d1, np.inf) + + test_cases = [ + # v1 v2 expected + (dtmin, -np.inf, dtmin), + (dtmax, -np.inf, dtmax), + (d1, d1_next, d1_next), + (dtmax, np.nan, np.nan), + ] + + for v1, v2, expected in test_cases: + assert_equal(np.maximum([v1], [v2]), [expected]) + assert_equal(np.maximum.reduce([v1, v2]), expected) + + +class TestMinimum(_FilterInvalids): + def test_reduce(self): + dflt = np.typecodes['AllFloat'] + dint = np.typecodes['AllInteger'] + seq1 = np.arange(11) + seq2 = seq1[::-1] + func = np.minimum.reduce + for dt in dint: + tmp1 = seq1.astype(dt) + tmp2 = seq2.astype(dt) + assert_equal(func(tmp1), 0) + assert_equal(func(tmp2), 0) + for dt in dflt: + tmp1 = seq1.astype(dt) + tmp2 = seq2.astype(dt) + assert_equal(func(tmp1), 0) + assert_equal(func(tmp2), 0) + tmp1[::2] = np.nan + tmp2[::2] = np.nan + assert_equal(func(tmp1), np.nan) + assert_equal(func(tmp2), np.nan) + + def test_reduce_complex(self): + assert_equal(np.minimum.reduce([1, 2j]), 2j) + assert_equal(np.minimum.reduce([1+3j, 2j]), 2j) + + def test_float_nans(self): + nan = np.nan + arg1 = np.array([0, nan, nan]) + arg2 = np.array([nan, 0, nan]) + out = np.array([nan, nan, nan]) + assert_equal(np.minimum(arg1, arg2), out) + + def test_object_nans(self): + # Multiple checks to give this a chance to + # fail if cmp is used instead of rich compare. + # Failure cannot be guaranteed. + for i in range(1): + x = np.array(float('nan'), object) + y = 1.0 + z = np.array(float('nan'), object) + assert_(np.minimum(x, y) == 1.0) + assert_(np.minimum(z, y) == 1.0) + + def test_complex_nans(self): + nan = np.nan + for cnan in [complex(nan, 0), complex(0, nan), complex(nan, nan)]: + arg1 = np.array([0, cnan, cnan], dtype=complex) + arg2 = np.array([cnan, 0, cnan], dtype=complex) + out = np.array([nan, nan, nan], dtype=complex) + assert_equal(np.minimum(arg1, arg2), out) + + def test_object_array(self): + arg1 = np.arange(5, dtype=object) + arg2 = arg1 + 1 + assert_equal(np.minimum(arg1, arg2), arg1) + + def test_strided_array(self): + arr1 = np.array([-4.0, 1.0, 10.0, 0.0, np.nan, -np.nan, np.inf, -np.inf]) + arr2 = np.array([-2.0,-1.0, np.nan, 1.0, 0.0, np.nan, 1.0, -3.0]) + mintrue = np.array([-4.0, -1.0, np.nan, 0.0, np.nan, np.nan, 1.0, -np.inf]) + out = np.ones(8) + out_mintrue = np.array([-4.0, 1.0, 1.0, 1.0, 1.0, 1.0, np.nan, 1.0]) + assert_equal(np.minimum(arr1,arr2), mintrue) + assert_equal(np.minimum(arr1[::2],arr2[::2]), mintrue[::2]) + assert_equal(np.minimum(arr1[:4:], arr2[::2]), np.array([-4.0, np.nan, 0.0, 0.0])) + assert_equal(np.minimum(arr1[::3], arr2[:3:]), np.array([-4.0, -1.0, np.nan])) + assert_equal(np.minimum(arr1[:6:2], arr2[::3], out=out[::3]), np.array([-4.0, 1.0, np.nan])) + assert_equal(out, out_mintrue) + + def test_precision(self): + dtypes = [np.float16, np.float32, np.float64, np.longdouble] + + for dt in dtypes: + dtmin = np.finfo(dt).min + dtmax = np.finfo(dt).max + d1 = dt(0.1) + d1_next = np.nextafter(d1, np.inf) + + test_cases = [ + # v1 v2 expected + (dtmin, np.inf, dtmin), + (dtmax, np.inf, dtmax), + (d1, d1_next, d1), + (dtmin, np.nan, np.nan), + ] + + for v1, v2, expected in test_cases: + assert_equal(np.minimum([v1], [v2]), [expected]) + assert_equal(np.minimum.reduce([v1, v2]), expected) + + +class TestFmax(_FilterInvalids): + def test_reduce(self): + dflt = np.typecodes['AllFloat'] + dint = np.typecodes['AllInteger'] + seq1 = np.arange(11) + seq2 = seq1[::-1] + func = np.fmax.reduce + for dt in dint: + tmp1 = seq1.astype(dt) + tmp2 = seq2.astype(dt) + assert_equal(func(tmp1), 10) + assert_equal(func(tmp2), 10) + for dt in dflt: + tmp1 = seq1.astype(dt) + tmp2 = seq2.astype(dt) + assert_equal(func(tmp1), 10) + assert_equal(func(tmp2), 10) + tmp1[::2] = np.nan + tmp2[::2] = np.nan + assert_equal(func(tmp1), 9) + assert_equal(func(tmp2), 9) + + def test_reduce_complex(self): + assert_equal(np.fmax.reduce([1, 2j]), 1) + assert_equal(np.fmax.reduce([1+3j, 2j]), 1+3j) + + def test_float_nans(self): + nan = np.nan + arg1 = np.array([0, nan, nan]) + arg2 = np.array([nan, 0, nan]) + out = np.array([0, 0, nan]) + assert_equal(np.fmax(arg1, arg2), out) + + def test_complex_nans(self): + nan = np.nan + for cnan in [complex(nan, 0), complex(0, nan), complex(nan, nan)]: + arg1 = np.array([0, cnan, cnan], dtype=complex) + arg2 = np.array([cnan, 0, cnan], dtype=complex) + out = np.array([0, 0, nan], dtype=complex) + assert_equal(np.fmax(arg1, arg2), out) + + def test_precision(self): + dtypes = [np.float16, np.float32, np.float64, np.longdouble] + + for dt in dtypes: + dtmin = np.finfo(dt).min + dtmax = np.finfo(dt).max + d1 = dt(0.1) + d1_next = np.nextafter(d1, np.inf) + + test_cases = [ + # v1 v2 expected + (dtmin, -np.inf, dtmin), + (dtmax, -np.inf, dtmax), + (d1, d1_next, d1_next), + (dtmax, np.nan, dtmax), + ] + + for v1, v2, expected in test_cases: + assert_equal(np.fmax([v1], [v2]), [expected]) + assert_equal(np.fmax.reduce([v1, v2]), expected) + + +class TestFmin(_FilterInvalids): + def test_reduce(self): + dflt = np.typecodes['AllFloat'] + dint = np.typecodes['AllInteger'] + seq1 = np.arange(11) + seq2 = seq1[::-1] + func = np.fmin.reduce + for dt in dint: + tmp1 = seq1.astype(dt) + tmp2 = seq2.astype(dt) + assert_equal(func(tmp1), 0) + assert_equal(func(tmp2), 0) + for dt in dflt: + tmp1 = seq1.astype(dt) + tmp2 = seq2.astype(dt) + assert_equal(func(tmp1), 0) + assert_equal(func(tmp2), 0) + tmp1[::2] = np.nan + tmp2[::2] = np.nan + assert_equal(func(tmp1), 1) + assert_equal(func(tmp2), 1) + + def test_reduce_complex(self): + assert_equal(np.fmin.reduce([1, 2j]), 2j) + assert_equal(np.fmin.reduce([1+3j, 2j]), 2j) + + def test_float_nans(self): + nan = np.nan + arg1 = np.array([0, nan, nan]) + arg2 = np.array([nan, 0, nan]) + out = np.array([0, 0, nan]) + assert_equal(np.fmin(arg1, arg2), out) + + def test_complex_nans(self): + nan = np.nan + for cnan in [complex(nan, 0), complex(0, nan), complex(nan, nan)]: + arg1 = np.array([0, cnan, cnan], dtype=complex) + arg2 = np.array([cnan, 0, cnan], dtype=complex) + out = np.array([0, 0, nan], dtype=complex) + assert_equal(np.fmin(arg1, arg2), out) + + def test_precision(self): + dtypes = [np.float16, np.float32, np.float64, np.longdouble] + + for dt in dtypes: + dtmin = np.finfo(dt).min + dtmax = np.finfo(dt).max + d1 = dt(0.1) + d1_next = np.nextafter(d1, np.inf) + + test_cases = [ + # v1 v2 expected + (dtmin, np.inf, dtmin), + (dtmax, np.inf, dtmax), + (d1, d1_next, d1), + (dtmin, np.nan, dtmin), + ] + + for v1, v2, expected in test_cases: + assert_equal(np.fmin([v1], [v2]), [expected]) + assert_equal(np.fmin.reduce([v1, v2]), expected) + + +class TestBool: + def test_exceptions(self): + a = np.ones(1, dtype=np.bool) + assert_raises(TypeError, np.negative, a) + assert_raises(TypeError, np.positive, a) + assert_raises(TypeError, np.subtract, a, a) + + def test_truth_table_logical(self): + # 2, 3 and 4 serves as true values + input1 = [0, 0, 3, 2] + input2 = [0, 4, 0, 2] + + typecodes = (np.typecodes['AllFloat'] + + np.typecodes['AllInteger'] + + '?') # boolean + for dtype in map(np.dtype, typecodes): + arg1 = np.asarray(input1, dtype=dtype) + arg2 = np.asarray(input2, dtype=dtype) + + # OR + out = [False, True, True, True] + for func in (np.logical_or, np.maximum): + assert_equal(func(arg1, arg2).astype(bool), out) + # AND + out = [False, False, False, True] + for func in (np.logical_and, np.minimum): + assert_equal(func(arg1, arg2).astype(bool), out) + # XOR + out = [False, True, True, False] + for func in (np.logical_xor, np.not_equal): + assert_equal(func(arg1, arg2).astype(bool), out) + + def test_truth_table_bitwise(self): + arg1 = [False, False, True, True] + arg2 = [False, True, False, True] + + out = [False, True, True, True] + assert_equal(np.bitwise_or(arg1, arg2), out) + + out = [False, False, False, True] + assert_equal(np.bitwise_and(arg1, arg2), out) + + out = [False, True, True, False] + assert_equal(np.bitwise_xor(arg1, arg2), out) + + def test_reduce(self): + none = np.array([0, 0, 0, 0], bool) + some = np.array([1, 0, 1, 1], bool) + every = np.array([1, 1, 1, 1], bool) + empty = np.array([], bool) + + arrs = [none, some, every, empty] + + for arr in arrs: + assert_equal(np.logical_and.reduce(arr), all(arr)) + + for arr in arrs: + assert_equal(np.logical_or.reduce(arr), any(arr)) + + for arr in arrs: + assert_equal(np.logical_xor.reduce(arr), arr.sum() % 2 == 1) + + +class TestBitwiseUFuncs: + + _all_ints_bits = [ + np.dtype(c).itemsize * 8 for c in np.typecodes["AllInteger"]] + bitwise_types = [ + np.dtype(c) for c in '?' + np.typecodes["AllInteger"] + 'O'] + bitwise_bits = [ + 2, # boolean type + *_all_ints_bits, # All integers + max(_all_ints_bits) + 1, # Object_ type + ] + + def test_values(self): + for dt in self.bitwise_types: + zeros = np.array([0], dtype=dt) + ones = np.array([-1]).astype(dt) + msg = "dt = '%s'" % dt.char + + assert_equal(np.bitwise_not(zeros), ones, err_msg=msg) + assert_equal(np.bitwise_not(ones), zeros, err_msg=msg) + + assert_equal(np.bitwise_or(zeros, zeros), zeros, err_msg=msg) + assert_equal(np.bitwise_or(zeros, ones), ones, err_msg=msg) + assert_equal(np.bitwise_or(ones, zeros), ones, err_msg=msg) + assert_equal(np.bitwise_or(ones, ones), ones, err_msg=msg) + + assert_equal(np.bitwise_xor(zeros, zeros), zeros, err_msg=msg) + assert_equal(np.bitwise_xor(zeros, ones), ones, err_msg=msg) + assert_equal(np.bitwise_xor(ones, zeros), ones, err_msg=msg) + assert_equal(np.bitwise_xor(ones, ones), zeros, err_msg=msg) + + assert_equal(np.bitwise_and(zeros, zeros), zeros, err_msg=msg) + assert_equal(np.bitwise_and(zeros, ones), zeros, err_msg=msg) + assert_equal(np.bitwise_and(ones, zeros), zeros, err_msg=msg) + assert_equal(np.bitwise_and(ones, ones), ones, err_msg=msg) + + def test_types(self): + for dt in self.bitwise_types: + zeros = np.array([0], dtype=dt) + ones = np.array([-1]).astype(dt) + msg = "dt = '%s'" % dt.char + + assert_(np.bitwise_not(zeros).dtype == dt, msg) + assert_(np.bitwise_or(zeros, zeros).dtype == dt, msg) + assert_(np.bitwise_xor(zeros, zeros).dtype == dt, msg) + assert_(np.bitwise_and(zeros, zeros).dtype == dt, msg) + + def test_identity(self): + assert_(np.bitwise_or.identity == 0, 'bitwise_or') + assert_(np.bitwise_xor.identity == 0, 'bitwise_xor') + assert_(np.bitwise_and.identity == -1, 'bitwise_and') + + def test_reduction(self): + binary_funcs = (np.bitwise_or, np.bitwise_xor, np.bitwise_and) + + for dt in self.bitwise_types: + zeros = np.array([0], dtype=dt) + ones = np.array([-1]).astype(dt) + for f in binary_funcs: + msg = "dt: '%s', f: '%s'" % (dt, f) + assert_equal(f.reduce(zeros), zeros, err_msg=msg) + assert_equal(f.reduce(ones), ones, err_msg=msg) + + # Test empty reduction, no object dtype + for dt in self.bitwise_types[:-1]: + # No object array types + empty = np.array([], dtype=dt) + for f in binary_funcs: + msg = "dt: '%s', f: '%s'" % (dt, f) + tgt = np.array(f.identity).astype(dt) + res = f.reduce(empty) + assert_equal(res, tgt, err_msg=msg) + assert_(res.dtype == tgt.dtype, msg) + + # Empty object arrays use the identity. Note that the types may + # differ, the actual type used is determined by the assign_identity + # function and is not the same as the type returned by the identity + # method. + for f in binary_funcs: + msg = "dt: '%s'" % (f,) + empty = np.array([], dtype=object) + tgt = f.identity + res = f.reduce(empty) + assert_equal(res, tgt, err_msg=msg) + + # Non-empty object arrays do not use the identity + for f in binary_funcs: + msg = "dt: '%s'" % (f,) + btype = np.array([True], dtype=object) + assert_(type(f.reduce(btype)) is bool, msg) + + @pytest.mark.parametrize("input_dtype_obj, bitsize", + zip(bitwise_types, bitwise_bits)) + def test_bitwise_count(self, input_dtype_obj, bitsize): + input_dtype = input_dtype_obj.type + + # bitwise_count is only in-built in 3.10+ + if sys.version_info < (3, 10) and input_dtype == np.object_: + pytest.skip("Required Python >=3.10") + + for i in range(1, bitsize): + num = 2**i - 1 + msg = f"bitwise_count for {num}" + assert i == np.bitwise_count(input_dtype(num)), msg + if np.issubdtype( + input_dtype, np.signedinteger) or input_dtype == np.object_: + assert i == np.bitwise_count(input_dtype(-num)), msg + + a = np.array([2**i-1 for i in range(1, bitsize)], dtype=input_dtype) + bitwise_count_a = np.bitwise_count(a) + expected = np.arange(1, bitsize, dtype=input_dtype) + + msg = f"array bitwise_count for {input_dtype}" + assert all(bitwise_count_a == expected), msg + + +class TestInt: + def test_logical_not(self): + x = np.ones(10, dtype=np.int16) + o = np.ones(10 * 2, dtype=bool) + tgt = o.copy() + tgt[::2] = False + os = o[::2] + assert_array_equal(np.logical_not(x, out=os), False) + assert_array_equal(o, tgt) + + +class TestFloatingPoint: + def test_floating_point(self): + assert_equal(ncu.FLOATING_POINT_SUPPORT, 1) + + +class TestDegrees: + def test_degrees(self): + assert_almost_equal(ncu.degrees(np.pi), 180.0) + assert_almost_equal(ncu.degrees(-0.5*np.pi), -90.0) + + +class TestRadians: + def test_radians(self): + assert_almost_equal(ncu.radians(180.0), np.pi) + assert_almost_equal(ncu.radians(-90.0), -0.5*np.pi) + + +class TestHeavside: + def test_heaviside(self): + x = np.array([[-30.0, -0.1, 0.0, 0.2], [7.5, np.nan, np.inf, -np.inf]]) + expectedhalf = np.array([[0.0, 0.0, 0.5, 1.0], [1.0, np.nan, 1.0, 0.0]]) + expected1 = expectedhalf.copy() + expected1[0, 2] = 1 + + h = ncu.heaviside(x, 0.5) + assert_equal(h, expectedhalf) + + h = ncu.heaviside(x, 1.0) + assert_equal(h, expected1) + + x = x.astype(np.float32) + + h = ncu.heaviside(x, np.float32(0.5)) + assert_equal(h, expectedhalf.astype(np.float32)) + + h = ncu.heaviside(x, np.float32(1.0)) + assert_equal(h, expected1.astype(np.float32)) + + +class TestSign: + def test_sign(self): + a = np.array([np.inf, -np.inf, np.nan, 0.0, 3.0, -3.0]) + out = np.zeros(a.shape) + tgt = np.array([1., -1., np.nan, 0.0, 1.0, -1.0]) + + with np.errstate(invalid='ignore'): + res = ncu.sign(a) + assert_equal(res, tgt) + res = ncu.sign(a, out) + assert_equal(res, tgt) + assert_equal(out, tgt) + + def test_sign_complex(self): + a = np.array([ + np.inf, -np.inf, complex(0, np.inf), complex(0, -np.inf), + complex(np.inf, np.inf), complex(np.inf, -np.inf), # nan + np.nan, complex(0, np.nan), complex(np.nan, np.nan), # nan + 0.0, # 0. + 3.0, -3.0, -2j, 3.0+4.0j, -8.0+6.0j + ]) + out = np.zeros(a.shape, a.dtype) + tgt = np.array([ + 1., -1., 1j, -1j, + ] + [complex(np.nan, np.nan)] * 5 + [ + 0.0, + 1.0, -1.0, -1j, 0.6+0.8j, -0.8+0.6j]) + + with np.errstate(invalid='ignore'): + res = ncu.sign(a) + assert_equal(res, tgt) + res = ncu.sign(a, out) + assert_(res is out) + assert_equal(res, tgt) + + def test_sign_dtype_object(self): + # In reference to github issue #6229 + + foo = np.array([-.1, 0, .1]) + a = np.sign(foo.astype(object)) + b = np.sign(foo) + + assert_array_equal(a, b) + + def test_sign_dtype_nan_object(self): + # In reference to github issue #6229 + def test_nan(): + foo = np.array([np.nan]) + # FIXME: a not used + a = np.sign(foo.astype(object)) + + assert_raises(TypeError, test_nan) + +class TestMinMax: + def test_minmax_blocked(self): + # simd tests on max/min, test all alignments, slow but important + # for 2 * vz + 2 * (vs - 1) + 1 (unrolled once) + for dt, sz in [(np.float32, 15), (np.float64, 7)]: + for out, inp, msg in _gen_alignment_data(dtype=dt, type='unary', + max_size=sz): + for i in range(inp.size): + inp[:] = np.arange(inp.size, dtype=dt) + inp[i] = np.nan + emsg = lambda: '%r\n%s' % (inp, msg) + with suppress_warnings() as sup: + sup.filter(RuntimeWarning, + "invalid value encountered in reduce") + assert_(np.isnan(inp.max()), msg=emsg) + assert_(np.isnan(inp.min()), msg=emsg) + + inp[i] = 1e10 + assert_equal(inp.max(), 1e10, err_msg=msg) + inp[i] = -1e10 + assert_equal(inp.min(), -1e10, err_msg=msg) + + def test_lower_align(self): + # check data that is not aligned to element size + # i.e doubles are aligned to 4 bytes on i386 + d = np.zeros(23 * 8, dtype=np.int8)[4:-4].view(np.float64) + assert_equal(d.max(), d[0]) + assert_equal(d.min(), d[0]) + + def test_reduce_reorder(self): + # gh 10370, 11029 Some compilers reorder the call to npy_getfloatstatus + # and put it before the call to an intrisic function that causes + # invalid status to be set. Also make sure warnings are not emitted + for n in (2, 4, 8, 16, 32): + for dt in (np.float32, np.float16, np.complex64): + for r in np.diagflat(np.array([np.nan] * n, dtype=dt)): + assert_equal(np.min(r), np.nan) + + def test_minimize_no_warns(self): + a = np.minimum(np.nan, 1) + assert_equal(a, np.nan) + + +class TestAbsoluteNegative: + def test_abs_neg_blocked(self): + # simd tests on abs, test all alignments for vz + 2 * (vs - 1) + 1 + for dt, sz in [(np.float32, 11), (np.float64, 5)]: + for out, inp, msg in _gen_alignment_data(dtype=dt, type='unary', + max_size=sz): + tgt = [ncu.absolute(i) for i in inp] + np.absolute(inp, out=out) + assert_equal(out, tgt, err_msg=msg) + assert_((out >= 0).all()) + + tgt = [-1*(i) for i in inp] + np.negative(inp, out=out) + assert_equal(out, tgt, err_msg=msg) + + for v in [np.nan, -np.inf, np.inf]: + for i in range(inp.size): + d = np.arange(inp.size, dtype=dt) + inp[:] = -d + inp[i] = v + d[i] = -v if v == -np.inf else v + assert_array_equal(np.abs(inp), d, err_msg=msg) + np.abs(inp, out=out) + assert_array_equal(out, d, err_msg=msg) + + assert_array_equal(-inp, -1*inp, err_msg=msg) + d = -1 * inp + np.negative(inp, out=out) + assert_array_equal(out, d, err_msg=msg) + + def test_lower_align(self): + # check data that is not aligned to element size + # i.e doubles are aligned to 4 bytes on i386 + d = np.zeros(23 * 8, dtype=np.int8)[4:-4].view(np.float64) + assert_equal(np.abs(d), d) + assert_equal(np.negative(d), -d) + np.negative(d, out=d) + np.negative(np.ones_like(d), out=d) + np.abs(d, out=d) + np.abs(np.ones_like(d), out=d) + + @pytest.mark.parametrize("dtype", ['d', 'f', 'int32', 'int64']) + @pytest.mark.parametrize("big", [True, False]) + def test_noncontiguous(self, dtype, big): + data = np.array([-1.0, 1.0, -0.0, 0.0, 2.2251e-308, -2.5, 2.5, -6, + 6, -2.2251e-308, -8, 10], dtype=dtype) + expect = np.array([1.0, -1.0, 0.0, -0.0, -2.2251e-308, 2.5, -2.5, 6, + -6, 2.2251e-308, 8, -10], dtype=dtype) + if big: + data = np.repeat(data, 10) + expect = np.repeat(expect, 10) + out = np.ndarray(data.shape, dtype=dtype) + ncontig_in = data[1::2] + ncontig_out = out[1::2] + contig_in = np.array(ncontig_in) + # contig in, contig out + assert_array_equal(np.negative(contig_in), expect[1::2]) + # contig in, ncontig out + assert_array_equal(np.negative(contig_in, out=ncontig_out), + expect[1::2]) + # ncontig in, contig out + assert_array_equal(np.negative(ncontig_in), expect[1::2]) + # ncontig in, ncontig out + assert_array_equal(np.negative(ncontig_in, out=ncontig_out), + expect[1::2]) + # contig in, contig out, nd stride + data_split = np.array(np.array_split(data, 2)) + expect_split = np.array(np.array_split(expect, 2)) + assert_equal(np.negative(data_split), expect_split) + + +class TestPositive: + def test_valid(self): + valid_dtypes = [int, float, complex, object] + for dtype in valid_dtypes: + x = np.arange(5, dtype=dtype) + result = np.positive(x) + assert_equal(x, result, err_msg=str(dtype)) + + def test_invalid(self): + with assert_raises(TypeError): + np.positive(True) + with assert_raises(TypeError): + np.positive(np.datetime64('2000-01-01')) + with assert_raises(TypeError): + np.positive(np.array(['foo'], dtype=str)) + with assert_raises(TypeError): + np.positive(np.array(['bar'], dtype=object)) + + +class TestSpecialMethods: + def test_wrap(self): + + class with_wrap: + def __array__(self, dtype=None, copy=None): + return np.zeros(1) + + def __array_wrap__(self, arr, context, return_scalar): + r = with_wrap() + r.arr = arr + r.context = context + return r + + a = with_wrap() + x = ncu.minimum(a, a) + assert_equal(x.arr, np.zeros(1)) + func, args, i = x.context + assert_(func is ncu.minimum) + assert_equal(len(args), 2) + assert_equal(args[0], a) + assert_equal(args[1], a) + assert_equal(i, 0) + + def test_wrap_out(self): + # Calling convention for out should not affect how special methods are + # called + + class StoreArrayPrepareWrap(np.ndarray): + _wrap_args = None + _prepare_args = None + + def __new__(cls): + return np.zeros(()).view(cls) + + def __array_wrap__(self, obj, context, return_scalar): + self._wrap_args = context[1] + return obj + + @property + def args(self): + # We need to ensure these are fetched at the same time, before + # any other ufuncs are called by the assertions + return self._wrap_args + + def __repr__(self): + return "a" # for short test output + + def do_test(f_call, f_expected): + a = StoreArrayPrepareWrap() + + f_call(a) + + w = a.args + expected = f_expected(a) + try: + assert w == expected + except AssertionError as e: + # assert_equal produces truly useless error messages + raise AssertionError("\n".join([ + "Bad arguments passed in ufunc call", + " expected: {}".format(expected), + " __array_wrap__ got: {}".format(w) + ])) + + # method not on the out argument + do_test(lambda a: np.add(a, 0), lambda a: (a, 0)) + do_test(lambda a: np.add(a, 0, None), lambda a: (a, 0)) + do_test(lambda a: np.add(a, 0, out=None), lambda a: (a, 0)) + do_test(lambda a: np.add(a, 0, out=(None,)), lambda a: (a, 0)) + + # method on the out argument + do_test(lambda a: np.add(0, 0, a), lambda a: (0, 0, a)) + do_test(lambda a: np.add(0, 0, out=a), lambda a: (0, 0, a)) + do_test(lambda a: np.add(0, 0, out=(a,)), lambda a: (0, 0, a)) + + # Also check the where mask handling: + do_test(lambda a: np.add(a, 0, where=False), lambda a: (a, 0)) + do_test(lambda a: np.add(0, 0, a, where=False), lambda a: (0, 0, a)) + + def test_wrap_with_iterable(self): + # test fix for bug #1026: + + class with_wrap(np.ndarray): + __array_priority__ = 10 + + def __new__(cls): + return np.asarray(1).view(cls).copy() + + def __array_wrap__(self, arr, context, return_scalar): + return arr.view(type(self)) + + a = with_wrap() + x = ncu.multiply(a, (1, 2, 3)) + assert_(isinstance(x, with_wrap)) + assert_array_equal(x, np.array((1, 2, 3))) + + def test_priority_with_scalar(self): + # test fix for bug #826: + + class A(np.ndarray): + __array_priority__ = 10 + + def __new__(cls): + return np.asarray(1.0, 'float64').view(cls).copy() + + a = A() + x = np.float64(1)*a + assert_(isinstance(x, A)) + assert_array_equal(x, np.array(1)) + + def test_priority(self): + + class A: + def __array__(self, dtype=None, copy=None): + return np.zeros(1) + + def __array_wrap__(self, arr, context, return_scalar): + r = type(self)() + r.arr = arr + r.context = context + return r + + class B(A): + __array_priority__ = 20. + + class C(A): + __array_priority__ = 40. + + x = np.zeros(1) + a = A() + b = B() + c = C() + f = ncu.minimum + assert_(type(f(x, x)) is np.ndarray) + assert_(type(f(x, a)) is A) + assert_(type(f(x, b)) is B) + assert_(type(f(x, c)) is C) + assert_(type(f(a, x)) is A) + assert_(type(f(b, x)) is B) + assert_(type(f(c, x)) is C) + + assert_(type(f(a, a)) is A) + assert_(type(f(a, b)) is B) + assert_(type(f(b, a)) is B) + assert_(type(f(b, b)) is B) + assert_(type(f(b, c)) is C) + assert_(type(f(c, b)) is C) + assert_(type(f(c, c)) is C) + + assert_(type(ncu.exp(a) is A)) + assert_(type(ncu.exp(b) is B)) + assert_(type(ncu.exp(c) is C)) + + def test_failing_wrap(self): + + class A: + def __array__(self, dtype=None, copy=None): + return np.zeros(2) + + def __array_wrap__(self, arr, context, return_scalar): + raise RuntimeError + + a = A() + assert_raises(RuntimeError, ncu.maximum, a, a) + assert_raises(RuntimeError, ncu.maximum.reduce, a) + + def test_failing_out_wrap(self): + + singleton = np.array([1.0]) + + class Ok(np.ndarray): + def __array_wrap__(self, obj, context, return_scalar): + return singleton + + class Bad(np.ndarray): + def __array_wrap__(self, obj, context, return_scalar): + raise RuntimeError + + ok = np.empty(1).view(Ok) + bad = np.empty(1).view(Bad) + # double-free (segfault) of "ok" if "bad" raises an exception + for i in range(10): + assert_raises(RuntimeError, ncu.frexp, 1, ok, bad) + + def test_none_wrap(self): + # Tests that issue #8507 is resolved. Previously, this would segfault + + class A: + def __array__(self, dtype=None, copy=None): + return np.zeros(1) + + def __array_wrap__(self, arr, context=None, return_scalar=False): + return None + + a = A() + assert_equal(ncu.maximum(a, a), None) + + def test_default_prepare(self): + + class with_wrap: + __array_priority__ = 10 + + def __array__(self, dtype=None, copy=None): + return np.zeros(1) + + def __array_wrap__(self, arr, context, return_scalar): + return arr + + a = with_wrap() + x = ncu.minimum(a, a) + assert_equal(x, np.zeros(1)) + assert_equal(type(x), np.ndarray) + + def test_array_too_many_args(self): + + class A: + def __array__(self, dtype, context, copy=None): + return np.zeros(1) + + a = A() + assert_raises_regex(TypeError, '2 required positional', np.sum, a) + + def test_ufunc_override(self): + # check override works even with instance with high priority. + class A: + def __array_ufunc__(self, func, method, *inputs, **kwargs): + return self, func, method, inputs, kwargs + + class MyNDArray(np.ndarray): + __array_priority__ = 100 + + a = A() + b = np.array([1]).view(MyNDArray) + res0 = np.multiply(a, b) + res1 = np.multiply(b, b, out=a) + + # self + assert_equal(res0[0], a) + assert_equal(res1[0], a) + assert_equal(res0[1], np.multiply) + assert_equal(res1[1], np.multiply) + assert_equal(res0[2], '__call__') + assert_equal(res1[2], '__call__') + assert_equal(res0[3], (a, b)) + assert_equal(res1[3], (b, b)) + assert_equal(res0[4], {}) + assert_equal(res1[4], {'out': (a,)}) + + def test_ufunc_override_mro(self): + + # Some multi arg functions for testing. + def tres_mul(a, b, c): + return a * b * c + + def quatro_mul(a, b, c, d): + return a * b * c * d + + # Make these into ufuncs. + three_mul_ufunc = np.frompyfunc(tres_mul, 3, 1) + four_mul_ufunc = np.frompyfunc(quatro_mul, 4, 1) + + class A: + def __array_ufunc__(self, func, method, *inputs, **kwargs): + return "A" + + class ASub(A): + def __array_ufunc__(self, func, method, *inputs, **kwargs): + return "ASub" + + class B: + def __array_ufunc__(self, func, method, *inputs, **kwargs): + return "B" + + class C: + def __init__(self): + self.count = 0 + + def __array_ufunc__(self, func, method, *inputs, **kwargs): + self.count += 1 + return NotImplemented + + class CSub(C): + def __array_ufunc__(self, func, method, *inputs, **kwargs): + self.count += 1 + return NotImplemented + + a = A() + a_sub = ASub() + b = B() + c = C() + + # Standard + res = np.multiply(a, a_sub) + assert_equal(res, "ASub") + res = np.multiply(a_sub, b) + assert_equal(res, "ASub") + + # With 1 NotImplemented + res = np.multiply(c, a) + assert_equal(res, "A") + assert_equal(c.count, 1) + # Check our counter works, so we can trust tests below. + res = np.multiply(c, a) + assert_equal(c.count, 2) + + # Both NotImplemented. + c = C() + c_sub = CSub() + assert_raises(TypeError, np.multiply, c, c_sub) + assert_equal(c.count, 1) + assert_equal(c_sub.count, 1) + c.count = c_sub.count = 0 + assert_raises(TypeError, np.multiply, c_sub, c) + assert_equal(c.count, 1) + assert_equal(c_sub.count, 1) + c.count = 0 + assert_raises(TypeError, np.multiply, c, c) + assert_equal(c.count, 1) + c.count = 0 + assert_raises(TypeError, np.multiply, 2, c) + assert_equal(c.count, 1) + + # Ternary testing. + assert_equal(three_mul_ufunc(a, 1, 2), "A") + assert_equal(three_mul_ufunc(1, a, 2), "A") + assert_equal(three_mul_ufunc(1, 2, a), "A") + + assert_equal(three_mul_ufunc(a, a, 6), "A") + assert_equal(three_mul_ufunc(a, 2, a), "A") + assert_equal(three_mul_ufunc(a, 2, b), "A") + assert_equal(three_mul_ufunc(a, 2, a_sub), "ASub") + assert_equal(three_mul_ufunc(a, a_sub, 3), "ASub") + c.count = 0 + assert_equal(three_mul_ufunc(c, a_sub, 3), "ASub") + assert_equal(c.count, 1) + c.count = 0 + assert_equal(three_mul_ufunc(1, a_sub, c), "ASub") + assert_equal(c.count, 0) + + c.count = 0 + assert_equal(three_mul_ufunc(a, b, c), "A") + assert_equal(c.count, 0) + c_sub.count = 0 + assert_equal(three_mul_ufunc(a, b, c_sub), "A") + assert_equal(c_sub.count, 0) + assert_equal(three_mul_ufunc(1, 2, b), "B") + + assert_raises(TypeError, three_mul_ufunc, 1, 2, c) + assert_raises(TypeError, three_mul_ufunc, c_sub, 2, c) + assert_raises(TypeError, three_mul_ufunc, c_sub, 2, 3) + + # Quaternary testing. + assert_equal(four_mul_ufunc(a, 1, 2, 3), "A") + assert_equal(four_mul_ufunc(1, a, 2, 3), "A") + assert_equal(four_mul_ufunc(1, 1, a, 3), "A") + assert_equal(four_mul_ufunc(1, 1, 2, a), "A") + + assert_equal(four_mul_ufunc(a, b, 2, 3), "A") + assert_equal(four_mul_ufunc(1, a, 2, b), "A") + assert_equal(four_mul_ufunc(b, 1, a, 3), "B") + assert_equal(four_mul_ufunc(a_sub, 1, 2, a), "ASub") + assert_equal(four_mul_ufunc(a, 1, 2, a_sub), "ASub") + + c = C() + c_sub = CSub() + assert_raises(TypeError, four_mul_ufunc, 1, 2, 3, c) + assert_equal(c.count, 1) + c.count = 0 + assert_raises(TypeError, four_mul_ufunc, 1, 2, c_sub, c) + assert_equal(c_sub.count, 1) + assert_equal(c.count, 1) + c2 = C() + c.count = c_sub.count = 0 + assert_raises(TypeError, four_mul_ufunc, 1, c, c_sub, c2) + assert_equal(c_sub.count, 1) + assert_equal(c.count, 1) + assert_equal(c2.count, 0) + c.count = c2.count = c_sub.count = 0 + assert_raises(TypeError, four_mul_ufunc, c2, c, c_sub, c) + assert_equal(c_sub.count, 1) + assert_equal(c.count, 0) + assert_equal(c2.count, 1) + + def test_ufunc_override_methods(self): + + class A: + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + return self, ufunc, method, inputs, kwargs + + # __call__ + a = A() + with assert_raises(TypeError): + np.multiply.__call__(1, a, foo='bar', answer=42) + res = np.multiply.__call__(1, a, subok='bar', where=42) + assert_equal(res[0], a) + assert_equal(res[1], np.multiply) + assert_equal(res[2], '__call__') + assert_equal(res[3], (1, a)) + assert_equal(res[4], {'subok': 'bar', 'where': 42}) + + # __call__, wrong args + assert_raises(TypeError, np.multiply, a) + assert_raises(TypeError, np.multiply, a, a, a, a) + assert_raises(TypeError, np.multiply, a, a, sig='a', signature='a') + assert_raises(TypeError, ncu_tests.inner1d, a, a, axis=0, axes=[0, 0]) + + # reduce, positional args + res = np.multiply.reduce(a, 'axis0', 'dtype0', 'out0', 'keep0') + assert_equal(res[0], a) + assert_equal(res[1], np.multiply) + assert_equal(res[2], 'reduce') + assert_equal(res[3], (a,)) + assert_equal(res[4], {'dtype':'dtype0', + 'out': ('out0',), + 'keepdims': 'keep0', + 'axis': 'axis0'}) + + # reduce, kwargs + res = np.multiply.reduce(a, axis='axis0', dtype='dtype0', out='out0', + keepdims='keep0', initial='init0', + where='where0') + assert_equal(res[0], a) + assert_equal(res[1], np.multiply) + assert_equal(res[2], 'reduce') + assert_equal(res[3], (a,)) + assert_equal(res[4], {'dtype':'dtype0', + 'out': ('out0',), + 'keepdims': 'keep0', + 'axis': 'axis0', + 'initial': 'init0', + 'where': 'where0'}) + + # reduce, output equal to None removed, but not other explicit ones, + # even if they are at their default value. + res = np.multiply.reduce(a, 0, None, None, False) + assert_equal(res[4], {'axis': 0, 'dtype': None, 'keepdims': False}) + res = np.multiply.reduce(a, out=None, axis=0, keepdims=True) + assert_equal(res[4], {'axis': 0, 'keepdims': True}) + res = np.multiply.reduce(a, None, out=(None,), dtype=None) + assert_equal(res[4], {'axis': None, 'dtype': None}) + res = np.multiply.reduce(a, 0, None, None, False, 2, True) + assert_equal(res[4], {'axis': 0, 'dtype': None, 'keepdims': False, + 'initial': 2, 'where': True}) + # np._NoValue ignored for initial + res = np.multiply.reduce(a, 0, None, None, False, + np._NoValue, True) + assert_equal(res[4], {'axis': 0, 'dtype': None, 'keepdims': False, + 'where': True}) + # None kept for initial, True for where. + res = np.multiply.reduce(a, 0, None, None, False, None, True) + assert_equal(res[4], {'axis': 0, 'dtype': None, 'keepdims': False, + 'initial': None, 'where': True}) + + # reduce, wrong args + assert_raises(ValueError, np.multiply.reduce, a, out=()) + assert_raises(ValueError, np.multiply.reduce, a, out=('out0', 'out1')) + assert_raises(TypeError, np.multiply.reduce, a, 'axis0', axis='axis0') + + # accumulate, pos args + res = np.multiply.accumulate(a, 'axis0', 'dtype0', 'out0') + assert_equal(res[0], a) + assert_equal(res[1], np.multiply) + assert_equal(res[2], 'accumulate') + assert_equal(res[3], (a,)) + assert_equal(res[4], {'dtype':'dtype0', + 'out': ('out0',), + 'axis': 'axis0'}) + + # accumulate, kwargs + res = np.multiply.accumulate(a, axis='axis0', dtype='dtype0', + out='out0') + assert_equal(res[0], a) + assert_equal(res[1], np.multiply) + assert_equal(res[2], 'accumulate') + assert_equal(res[3], (a,)) + assert_equal(res[4], {'dtype':'dtype0', + 'out': ('out0',), + 'axis': 'axis0'}) + + # accumulate, output equal to None removed. + res = np.multiply.accumulate(a, 0, None, None) + assert_equal(res[4], {'axis': 0, 'dtype': None}) + res = np.multiply.accumulate(a, out=None, axis=0, dtype='dtype1') + assert_equal(res[4], {'axis': 0, 'dtype': 'dtype1'}) + res = np.multiply.accumulate(a, None, out=(None,), dtype=None) + assert_equal(res[4], {'axis': None, 'dtype': None}) + + # accumulate, wrong args + assert_raises(ValueError, np.multiply.accumulate, a, out=()) + assert_raises(ValueError, np.multiply.accumulate, a, + out=('out0', 'out1')) + assert_raises(TypeError, np.multiply.accumulate, a, + 'axis0', axis='axis0') + + # reduceat, pos args + res = np.multiply.reduceat(a, [4, 2], 'axis0', 'dtype0', 'out0') + assert_equal(res[0], a) + assert_equal(res[1], np.multiply) + assert_equal(res[2], 'reduceat') + assert_equal(res[3], (a, [4, 2])) + assert_equal(res[4], {'dtype':'dtype0', + 'out': ('out0',), + 'axis': 'axis0'}) + + # reduceat, kwargs + res = np.multiply.reduceat(a, [4, 2], axis='axis0', dtype='dtype0', + out='out0') + assert_equal(res[0], a) + assert_equal(res[1], np.multiply) + assert_equal(res[2], 'reduceat') + assert_equal(res[3], (a, [4, 2])) + assert_equal(res[4], {'dtype':'dtype0', + 'out': ('out0',), + 'axis': 'axis0'}) + + # reduceat, output equal to None removed. + res = np.multiply.reduceat(a, [4, 2], 0, None, None) + assert_equal(res[4], {'axis': 0, 'dtype': None}) + res = np.multiply.reduceat(a, [4, 2], axis=None, out=None, dtype='dt') + assert_equal(res[4], {'axis': None, 'dtype': 'dt'}) + res = np.multiply.reduceat(a, [4, 2], None, None, out=(None,)) + assert_equal(res[4], {'axis': None, 'dtype': None}) + + # reduceat, wrong args + assert_raises(ValueError, np.multiply.reduce, a, [4, 2], out=()) + assert_raises(ValueError, np.multiply.reduce, a, [4, 2], + out=('out0', 'out1')) + assert_raises(TypeError, np.multiply.reduce, a, [4, 2], + 'axis0', axis='axis0') + + # outer + res = np.multiply.outer(a, 42) + assert_equal(res[0], a) + assert_equal(res[1], np.multiply) + assert_equal(res[2], 'outer') + assert_equal(res[3], (a, 42)) + assert_equal(res[4], {}) + + # outer, wrong args + assert_raises(TypeError, np.multiply.outer, a) + assert_raises(TypeError, np.multiply.outer, a, a, a, a) + assert_raises(TypeError, np.multiply.outer, a, a, sig='a', signature='a') + + # at + res = np.multiply.at(a, [4, 2], 'b0') + assert_equal(res[0], a) + assert_equal(res[1], np.multiply) + assert_equal(res[2], 'at') + assert_equal(res[3], (a, [4, 2], 'b0')) + + # at, wrong args + assert_raises(TypeError, np.multiply.at, a) + assert_raises(TypeError, np.multiply.at, a, a, a, a) + + def test_ufunc_override_out(self): + + class A: + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + return kwargs + + class B: + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + return kwargs + + a = A() + b = B() + res0 = np.multiply(a, b, 'out_arg') + res1 = np.multiply(a, b, out='out_arg') + res2 = np.multiply(2, b, 'out_arg') + res3 = np.multiply(3, b, out='out_arg') + res4 = np.multiply(a, 4, 'out_arg') + res5 = np.multiply(a, 5, out='out_arg') + + assert_equal(res0['out'][0], 'out_arg') + assert_equal(res1['out'][0], 'out_arg') + assert_equal(res2['out'][0], 'out_arg') + assert_equal(res3['out'][0], 'out_arg') + assert_equal(res4['out'][0], 'out_arg') + assert_equal(res5['out'][0], 'out_arg') + + # ufuncs with multiple output modf and frexp. + res6 = np.modf(a, 'out0', 'out1') + res7 = np.frexp(a, 'out0', 'out1') + assert_equal(res6['out'][0], 'out0') + assert_equal(res6['out'][1], 'out1') + assert_equal(res7['out'][0], 'out0') + assert_equal(res7['out'][1], 'out1') + + # While we're at it, check that default output is never passed on. + assert_(np.sin(a, None) == {}) + assert_(np.sin(a, out=None) == {}) + assert_(np.sin(a, out=(None,)) == {}) + assert_(np.modf(a, None) == {}) + assert_(np.modf(a, None, None) == {}) + assert_(np.modf(a, out=(None, None)) == {}) + with assert_raises(TypeError): + # Out argument must be tuple, since there are multiple outputs. + np.modf(a, out=None) + + # don't give positional and output argument, or too many arguments. + # wrong number of arguments in the tuple is an error too. + assert_raises(TypeError, np.multiply, a, b, 'one', out='two') + assert_raises(TypeError, np.multiply, a, b, 'one', 'two') + assert_raises(ValueError, np.multiply, a, b, out=('one', 'two')) + assert_raises(TypeError, np.multiply, a, out=()) + assert_raises(TypeError, np.modf, a, 'one', out=('two', 'three')) + assert_raises(TypeError, np.modf, a, 'one', 'two', 'three') + assert_raises(ValueError, np.modf, a, out=('one', 'two', 'three')) + assert_raises(ValueError, np.modf, a, out=('one',)) + + def test_ufunc_override_where(self): + + class OverriddenArrayOld(np.ndarray): + + def _unwrap(self, objs): + cls = type(self) + result = [] + for obj in objs: + if isinstance(obj, cls): + obj = np.array(obj) + elif type(obj) != np.ndarray: + return NotImplemented + result.append(obj) + return result + + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + + inputs = self._unwrap(inputs) + if inputs is NotImplemented: + return NotImplemented + + kwargs = kwargs.copy() + if "out" in kwargs: + kwargs["out"] = self._unwrap(kwargs["out"]) + if kwargs["out"] is NotImplemented: + return NotImplemented + + r = super().__array_ufunc__(ufunc, method, *inputs, **kwargs) + if r is not NotImplemented: + r = r.view(type(self)) + + return r + + class OverriddenArrayNew(OverriddenArrayOld): + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + + kwargs = kwargs.copy() + if "where" in kwargs: + kwargs["where"] = self._unwrap((kwargs["where"], )) + if kwargs["where"] is NotImplemented: + return NotImplemented + else: + kwargs["where"] = kwargs["where"][0] + + r = super().__array_ufunc__(ufunc, method, *inputs, **kwargs) + if r is not NotImplemented: + r = r.view(type(self)) + + return r + + ufunc = np.negative + + array = np.array([1, 2, 3]) + where = np.array([True, False, True]) + expected = ufunc(array, where=where) + + with pytest.raises(TypeError): + ufunc(array, where=where.view(OverriddenArrayOld)) + + result_1 = ufunc( + array, + where=where.view(OverriddenArrayNew) + ) + assert isinstance(result_1, OverriddenArrayNew) + assert np.all(np.array(result_1) == expected, where=where) + + result_2 = ufunc( + array.view(OverriddenArrayNew), + where=where.view(OverriddenArrayNew) + ) + assert isinstance(result_2, OverriddenArrayNew) + assert np.all(np.array(result_2) == expected, where=where) + + def test_ufunc_override_exception(self): + + class A: + def __array_ufunc__(self, *a, **kwargs): + raise ValueError("oops") + + a = A() + assert_raises(ValueError, np.negative, 1, out=a) + assert_raises(ValueError, np.negative, a) + assert_raises(ValueError, np.divide, 1., a) + + def test_ufunc_override_not_implemented(self): + + class A: + def __array_ufunc__(self, *args, **kwargs): + return NotImplemented + + msg = ("operand type(s) all returned NotImplemented from " + "__array_ufunc__(, '__call__', <*>): 'A'") + with assert_raises_regex(TypeError, fnmatch.translate(msg)): + np.negative(A()) + + msg = ("operand type(s) all returned NotImplemented from " + "__array_ufunc__(, '__call__', <*>, , " + "out=(1,)): 'A', 'object', 'int'") + with assert_raises_regex(TypeError, fnmatch.translate(msg)): + np.add(A(), object(), out=1) + + def test_ufunc_override_disabled(self): + + class OptOut: + __array_ufunc__ = None + + opt_out = OptOut() + + # ufuncs always raise + msg = "operand 'OptOut' does not support ufuncs" + with assert_raises_regex(TypeError, msg): + np.add(opt_out, 1) + with assert_raises_regex(TypeError, msg): + np.add(1, opt_out) + with assert_raises_regex(TypeError, msg): + np.negative(opt_out) + + # opt-outs still hold even when other arguments have pathological + # __array_ufunc__ implementations + + class GreedyArray: + def __array_ufunc__(self, *args, **kwargs): + return self + + greedy = GreedyArray() + assert_(np.negative(greedy) is greedy) + with assert_raises_regex(TypeError, msg): + np.add(greedy, opt_out) + with assert_raises_regex(TypeError, msg): + np.add(greedy, 1, out=opt_out) + + def test_gufunc_override(self): + # gufunc are just ufunc instances, but follow a different path, + # so check __array_ufunc__ overrides them properly. + class A: + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + return self, ufunc, method, inputs, kwargs + + inner1d = ncu_tests.inner1d + a = A() + res = inner1d(a, a) + assert_equal(res[0], a) + assert_equal(res[1], inner1d) + assert_equal(res[2], '__call__') + assert_equal(res[3], (a, a)) + assert_equal(res[4], {}) + + res = inner1d(1, 1, out=a) + assert_equal(res[0], a) + assert_equal(res[1], inner1d) + assert_equal(res[2], '__call__') + assert_equal(res[3], (1, 1)) + assert_equal(res[4], {'out': (a,)}) + + # wrong number of arguments in the tuple is an error too. + assert_raises(TypeError, inner1d, a, out='two') + assert_raises(TypeError, inner1d, a, a, 'one', out='two') + assert_raises(TypeError, inner1d, a, a, 'one', 'two') + assert_raises(ValueError, inner1d, a, a, out=('one', 'two')) + assert_raises(ValueError, inner1d, a, a, out=()) + + def test_ufunc_override_with_super(self): + # NOTE: this class is used in doc/source/user/basics.subclassing.rst + # if you make any changes here, do update it there too. + class A(np.ndarray): + def __array_ufunc__(self, ufunc, method, *inputs, out=None, **kwargs): + args = [] + in_no = [] + for i, input_ in enumerate(inputs): + if isinstance(input_, A): + in_no.append(i) + args.append(input_.view(np.ndarray)) + else: + args.append(input_) + + outputs = out + out_no = [] + if outputs: + out_args = [] + for j, output in enumerate(outputs): + if isinstance(output, A): + out_no.append(j) + out_args.append(output.view(np.ndarray)) + else: + out_args.append(output) + kwargs['out'] = tuple(out_args) + else: + outputs = (None,) * ufunc.nout + + info = {} + if in_no: + info['inputs'] = in_no + if out_no: + info['outputs'] = out_no + + results = super().__array_ufunc__(ufunc, method, + *args, **kwargs) + if results is NotImplemented: + return NotImplemented + + if method == 'at': + if isinstance(inputs[0], A): + inputs[0].info = info + return + + if ufunc.nout == 1: + results = (results,) + + results = tuple((np.asarray(result).view(A) + if output is None else output) + for result, output in zip(results, outputs)) + if results and isinstance(results[0], A): + results[0].info = info + + return results[0] if len(results) == 1 else results + + class B: + def __array_ufunc__(self, ufunc, method, *inputs, **kwargs): + if any(isinstance(input_, A) for input_ in inputs): + return "A!" + else: + return NotImplemented + + d = np.arange(5.) + # 1 input, 1 output + a = np.arange(5.).view(A) + b = np.sin(a) + check = np.sin(d) + assert_(np.all(check == b)) + assert_equal(b.info, {'inputs': [0]}) + b = np.sin(d, out=(a,)) + assert_(np.all(check == b)) + assert_equal(b.info, {'outputs': [0]}) + assert_(b is a) + a = np.arange(5.).view(A) + b = np.sin(a, out=a) + assert_(np.all(check == b)) + assert_equal(b.info, {'inputs': [0], 'outputs': [0]}) + + # 1 input, 2 outputs + a = np.arange(5.).view(A) + b1, b2 = np.modf(a) + assert_equal(b1.info, {'inputs': [0]}) + b1, b2 = np.modf(d, out=(None, a)) + assert_(b2 is a) + assert_equal(b1.info, {'outputs': [1]}) + a = np.arange(5.).view(A) + b = np.arange(5.).view(A) + c1, c2 = np.modf(a, out=(a, b)) + assert_(c1 is a) + assert_(c2 is b) + assert_equal(c1.info, {'inputs': [0], 'outputs': [0, 1]}) + + # 2 input, 1 output + a = np.arange(5.).view(A) + b = np.arange(5.).view(A) + c = np.add(a, b, out=a) + assert_(c is a) + assert_equal(c.info, {'inputs': [0, 1], 'outputs': [0]}) + # some tests with a non-ndarray subclass + a = np.arange(5.) + b = B() + assert_(a.__array_ufunc__(np.add, '__call__', a, b) is NotImplemented) + assert_(b.__array_ufunc__(np.add, '__call__', a, b) is NotImplemented) + assert_raises(TypeError, np.add, a, b) + a = a.view(A) + assert_(a.__array_ufunc__(np.add, '__call__', a, b) is NotImplemented) + assert_(b.__array_ufunc__(np.add, '__call__', a, b) == "A!") + assert_(np.add(a, b) == "A!") + # regression check for gh-9102 -- tests ufunc.reduce implicitly. + d = np.array([[1, 2, 3], [1, 2, 3]]) + a = d.view(A) + c = a.any() + check = d.any() + assert_equal(c, check) + assert_(c.info, {'inputs': [0]}) + c = a.max() + check = d.max() + assert_equal(c, check) + assert_(c.info, {'inputs': [0]}) + b = np.array(0).view(A) + c = a.max(out=b) + assert_equal(c, check) + assert_(c is b) + assert_(c.info, {'inputs': [0], 'outputs': [0]}) + check = a.max(axis=0) + b = np.zeros_like(check).view(A) + c = a.max(axis=0, out=b) + assert_equal(c, check) + assert_(c is b) + assert_(c.info, {'inputs': [0], 'outputs': [0]}) + # simple explicit tests of reduce, accumulate, reduceat + check = np.add.reduce(d, axis=1) + c = np.add.reduce(a, axis=1) + assert_equal(c, check) + assert_(c.info, {'inputs': [0]}) + b = np.zeros_like(c) + c = np.add.reduce(a, 1, None, b) + assert_equal(c, check) + assert_(c is b) + assert_(c.info, {'inputs': [0], 'outputs': [0]}) + check = np.add.accumulate(d, axis=0) + c = np.add.accumulate(a, axis=0) + assert_equal(c, check) + assert_(c.info, {'inputs': [0]}) + b = np.zeros_like(c) + c = np.add.accumulate(a, 0, None, b) + assert_equal(c, check) + assert_(c is b) + assert_(c.info, {'inputs': [0], 'outputs': [0]}) + indices = [0, 2, 1] + check = np.add.reduceat(d, indices, axis=1) + c = np.add.reduceat(a, indices, axis=1) + assert_equal(c, check) + assert_(c.info, {'inputs': [0]}) + b = np.zeros_like(c) + c = np.add.reduceat(a, indices, 1, None, b) + assert_equal(c, check) + assert_(c is b) + assert_(c.info, {'inputs': [0], 'outputs': [0]}) + # and a few tests for at + d = np.array([[1, 2, 3], [1, 2, 3]]) + check = d.copy() + a = d.copy().view(A) + np.add.at(check, ([0, 1], [0, 2]), 1.) + np.add.at(a, ([0, 1], [0, 2]), 1.) + assert_equal(a, check) + assert_(a.info, {'inputs': [0]}) + b = np.array(1.).view(A) + a = d.copy().view(A) + np.add.at(a, ([0, 1], [0, 2]), b) + assert_equal(a, check) + assert_(a.info, {'inputs': [0, 2]}) + + def test_array_ufunc_direct_call(self): + # This is mainly a regression test for gh-24023 (shouldn't segfault) + a = np.array(1) + with pytest.raises(TypeError): + a.__array_ufunc__() + + # No kwargs means kwargs may be NULL on the C-level + with pytest.raises(TypeError): + a.__array_ufunc__(1, 2) + + # And the same with a valid call: + res = a.__array_ufunc__(np.add, "__call__", a, a) + assert_array_equal(res, a + a) + +class TestChoose: + def test_mixed(self): + c = np.array([True, True]) + a = np.array([True, True]) + assert_equal(np.choose(c, (a, 1)), np.array([1, 1])) + + +class TestRationalFunctions: + def test_lcm(self): + self._test_lcm_inner(np.int16) + self._test_lcm_inner(np.uint16) + + def test_lcm_object(self): + self._test_lcm_inner(np.object_) + + def test_gcd(self): + self._test_gcd_inner(np.int16) + self._test_lcm_inner(np.uint16) + + def test_gcd_object(self): + self._test_gcd_inner(np.object_) + + def _test_lcm_inner(self, dtype): + # basic use + a = np.array([12, 120], dtype=dtype) + b = np.array([20, 200], dtype=dtype) + assert_equal(np.lcm(a, b), [60, 600]) + + if not issubclass(dtype, np.unsignedinteger): + # negatives are ignored + a = np.array([12, -12, 12, -12], dtype=dtype) + b = np.array([20, 20, -20, -20], dtype=dtype) + assert_equal(np.lcm(a, b), [60]*4) + + # reduce + a = np.array([3, 12, 20], dtype=dtype) + assert_equal(np.lcm.reduce([3, 12, 20]), 60) + + # broadcasting, and a test including 0 + a = np.arange(6).astype(dtype) + b = 20 + assert_equal(np.lcm(a, b), [0, 20, 20, 60, 20, 20]) + + def _test_gcd_inner(self, dtype): + # basic use + a = np.array([12, 120], dtype=dtype) + b = np.array([20, 200], dtype=dtype) + assert_equal(np.gcd(a, b), [4, 40]) + + if not issubclass(dtype, np.unsignedinteger): + # negatives are ignored + a = np.array([12, -12, 12, -12], dtype=dtype) + b = np.array([20, 20, -20, -20], dtype=dtype) + assert_equal(np.gcd(a, b), [4]*4) + + # reduce + a = np.array([15, 25, 35], dtype=dtype) + assert_equal(np.gcd.reduce(a), 5) + + # broadcasting, and a test including 0 + a = np.arange(6).astype(dtype) + b = 20 + assert_equal(np.gcd(a, b), [20, 1, 2, 1, 4, 5]) + + def test_lcm_overflow(self): + # verify that we don't overflow when a*b does overflow + big = np.int32(np.iinfo(np.int32).max // 11) + a = 2*big + b = 5*big + assert_equal(np.lcm(a, b), 10*big) + + def test_gcd_overflow(self): + for dtype in (np.int32, np.int64): + # verify that we don't overflow when taking abs(x) + # not relevant for lcm, where the result is unrepresentable anyway + a = dtype(np.iinfo(dtype).min) # negative power of two + q = -(a // 4) + assert_equal(np.gcd(a, q*3), q) + assert_equal(np.gcd(a, -q*3), q) + + def test_decimal(self): + from decimal import Decimal + a = np.array([1, 1, -1, -1]) * Decimal('0.20') + b = np.array([1, -1, 1, -1]) * Decimal('0.12') + + assert_equal(np.gcd(a, b), 4*[Decimal('0.04')]) + assert_equal(np.lcm(a, b), 4*[Decimal('0.60')]) + + def test_float(self): + # not well-defined on float due to rounding errors + assert_raises(TypeError, np.gcd, 0.3, 0.4) + assert_raises(TypeError, np.lcm, 0.3, 0.4) + + def test_huge_integers(self): + # Converting to an array first is a bit different as it means we + # have an explicit object dtype: + assert_equal(np.array(2**200), 2**200) + # Special promotion rules should ensure that this also works for + # two Python integers (even if slow). + # (We do this for comparisons, as the result is always bool and + # we also special case array comparisons with Python integers) + np.equal(2**200, 2**200) + + # But, we cannot do this when it would affect the result dtype: + with pytest.raises(OverflowError): + np.gcd(2**100, 3**100) + + # Asking for `object` explicitly is fine, though: + assert np.gcd(2**100, 3**100, dtype=object) == 1 + + # As of now, the below work, because it is using arrays (which + # will be object arrays) + a = np.array(2**100 * 3**5) + b = np.array([2**100 * 5**7, 2**50 * 3**10]) + assert_equal(np.gcd(a, b), [2**100, 2**50 * 3**5]) + assert_equal(np.lcm(a, b), [2**100 * 3**5 * 5**7, 2**100 * 3**10]) + + +class TestRoundingFunctions: + + def test_object_direct(self): + """ test direct implementation of these magic methods """ + class C: + def __floor__(self): + return 1 + def __ceil__(self): + return 2 + def __trunc__(self): + return 3 + + arr = np.array([C(), C()]) + assert_equal(np.floor(arr), [1, 1]) + assert_equal(np.ceil(arr), [2, 2]) + assert_equal(np.trunc(arr), [3, 3]) + + def test_object_indirect(self): + """ test implementations via __float__ """ + class C: + def __float__(self): + return -2.5 + + arr = np.array([C(), C()]) + assert_equal(np.floor(arr), [-3, -3]) + assert_equal(np.ceil(arr), [-2, -2]) + with pytest.raises(TypeError): + np.trunc(arr) # consistent with math.trunc + + def test_fraction(self): + f = Fraction(-4, 3) + assert_equal(np.floor(f), -2) + assert_equal(np.ceil(f), -1) + assert_equal(np.trunc(f), -1) + + +class TestComplexFunctions: + funcs = [np.arcsin, np.arccos, np.arctan, np.arcsinh, np.arccosh, + np.arctanh, np.sin, np.cos, np.tan, np.exp, + np.exp2, np.log, np.sqrt, np.log10, np.log2, + np.log1p] + + def test_it(self): + for f in self.funcs: + if f is np.arccosh: + x = 1.5 + else: + x = .5 + fr = f(x) + fz = f(complex(x)) + assert_almost_equal(fz.real, fr, err_msg='real part %s' % f) + assert_almost_equal(fz.imag, 0., err_msg='imag part %s' % f) + + @pytest.mark.xfail(IS_WASM, reason="doesn't work") + def test_precisions_consistent(self): + z = 1 + 1j + for f in self.funcs: + fcf = f(np.csingle(z)) + fcd = f(np.cdouble(z)) + fcl = f(np.clongdouble(z)) + assert_almost_equal(fcf, fcd, decimal=6, err_msg='fch-fcd %s' % f) + assert_almost_equal(fcl, fcd, decimal=15, err_msg='fch-fcl %s' % f) + + @pytest.mark.xfail(IS_WASM, reason="doesn't work") + def test_branch_cuts(self): + # check branch cuts and continuity on them + _check_branch_cut(np.log, -0.5, 1j, 1, -1, True) + _check_branch_cut(np.log2, -0.5, 1j, 1, -1, True) + _check_branch_cut(np.log10, -0.5, 1j, 1, -1, True) + _check_branch_cut(np.log1p, -1.5, 1j, 1, -1, True) + _check_branch_cut(np.sqrt, -0.5, 1j, 1, -1, True) + + _check_branch_cut(np.arcsin, [ -2, 2], [1j, 1j], 1, -1, True) + _check_branch_cut(np.arccos, [ -2, 2], [1j, 1j], 1, -1, True) + _check_branch_cut(np.arctan, [0-2j, 2j], [1, 1], -1, 1, True) + + _check_branch_cut(np.arcsinh, [0-2j, 2j], [1, 1], -1, 1, True) + _check_branch_cut(np.arccosh, [ -1, 0.5], [1j, 1j], 1, -1, True) + _check_branch_cut(np.arctanh, [ -2, 2], [1j, 1j], 1, -1, True) + + # check against bogus branch cuts: assert continuity between quadrants + _check_branch_cut(np.arcsin, [0-2j, 2j], [ 1, 1], 1, 1) + _check_branch_cut(np.arccos, [0-2j, 2j], [ 1, 1], 1, 1) + _check_branch_cut(np.arctan, [ -2, 2], [1j, 1j], 1, 1) + + _check_branch_cut(np.arcsinh, [ -2, 2, 0], [1j, 1j, 1], 1, 1) + _check_branch_cut(np.arccosh, [0-2j, 2j, 2], [1, 1, 1j], 1, 1) + _check_branch_cut(np.arctanh, [0-2j, 2j, 0], [1, 1, 1j], 1, 1) + + @pytest.mark.xfail(IS_WASM, reason="doesn't work") + def test_branch_cuts_complex64(self): + # check branch cuts and continuity on them + _check_branch_cut(np.log, -0.5, 1j, 1, -1, True, np.complex64) + _check_branch_cut(np.log2, -0.5, 1j, 1, -1, True, np.complex64) + _check_branch_cut(np.log10, -0.5, 1j, 1, -1, True, np.complex64) + _check_branch_cut(np.log1p, -1.5, 1j, 1, -1, True, np.complex64) + _check_branch_cut(np.sqrt, -0.5, 1j, 1, -1, True, np.complex64) + + _check_branch_cut(np.arcsin, [ -2, 2], [1j, 1j], 1, -1, True, np.complex64) + _check_branch_cut(np.arccos, [ -2, 2], [1j, 1j], 1, -1, True, np.complex64) + _check_branch_cut(np.arctan, [0-2j, 2j], [1, 1], -1, 1, True, np.complex64) + + _check_branch_cut(np.arcsinh, [0-2j, 2j], [1, 1], -1, 1, True, np.complex64) + _check_branch_cut(np.arccosh, [ -1, 0.5], [1j, 1j], 1, -1, True, np.complex64) + _check_branch_cut(np.arctanh, [ -2, 2], [1j, 1j], 1, -1, True, np.complex64) + + # check against bogus branch cuts: assert continuity between quadrants + _check_branch_cut(np.arcsin, [0-2j, 2j], [ 1, 1], 1, 1, False, np.complex64) + _check_branch_cut(np.arccos, [0-2j, 2j], [ 1, 1], 1, 1, False, np.complex64) + _check_branch_cut(np.arctan, [ -2, 2], [1j, 1j], 1, 1, False, np.complex64) + + _check_branch_cut(np.arcsinh, [ -2, 2, 0], [1j, 1j, 1], 1, 1, False, np.complex64) + _check_branch_cut(np.arccosh, [0-2j, 2j, 2], [1, 1, 1j], 1, 1, False, np.complex64) + _check_branch_cut(np.arctanh, [0-2j, 2j, 0], [1, 1, 1j], 1, 1, False, np.complex64) + + def test_against_cmath(self): + import cmath + + points = [-1-1j, -1+1j, +1-1j, +1+1j] + name_map = {'arcsin': 'asin', 'arccos': 'acos', 'arctan': 'atan', + 'arcsinh': 'asinh', 'arccosh': 'acosh', 'arctanh': 'atanh'} + atol = 4*np.finfo(complex).eps + for func in self.funcs: + fname = func.__name__.split('.')[-1] + cname = name_map.get(fname, fname) + try: + cfunc = getattr(cmath, cname) + except AttributeError: + continue + for p in points: + a = complex(func(np.complex128(p))) + b = cfunc(p) + assert_( + abs(a - b) < atol, + "%s %s: %s; cmath: %s" % (fname, p, a, b) + ) + + @pytest.mark.xfail( + # manylinux2014 uses glibc2.17 + _glibc_older_than("2.18"), + reason="Older glibc versions are imprecise (maybe passes with SIMD?)" + ) + @pytest.mark.xfail(IS_WASM, reason="doesn't work") + @pytest.mark.parametrize('dtype', [ + np.complex64, np.complex128, np.clongdouble + ]) + def test_loss_of_precision(self, dtype): + """Check loss of precision in complex arc* functions""" + if dtype is np.clongdouble and platform.machine() != 'x86_64': + # Failures on musllinux, aarch64, s390x, ppc64le (see gh-17554) + pytest.skip('Only works reliably for x86-64 and recent glibc') + + # Check against known-good functions + + info = np.finfo(dtype) + real_dtype = dtype(0.).real.dtype + eps = info.eps + + def check(x, rtol): + x = x.astype(real_dtype) + + z = x.astype(dtype) + d = np.absolute(np.arcsinh(x)/np.arcsinh(z).real - 1) + assert_(np.all(d < rtol), (np.argmax(d), x[np.argmax(d)], d.max(), + 'arcsinh')) + + z = (1j*x).astype(dtype) + d = np.absolute(np.arcsinh(x)/np.arcsin(z).imag - 1) + assert_(np.all(d < rtol), (np.argmax(d), x[np.argmax(d)], d.max(), + 'arcsin')) + + z = x.astype(dtype) + d = np.absolute(np.arctanh(x)/np.arctanh(z).real - 1) + assert_(np.all(d < rtol), (np.argmax(d), x[np.argmax(d)], d.max(), + 'arctanh')) + + z = (1j*x).astype(dtype) + d = np.absolute(np.arctanh(x)/np.arctan(z).imag - 1) + assert_(np.all(d < rtol), (np.argmax(d), x[np.argmax(d)], d.max(), + 'arctan')) + + # The switchover was chosen as 1e-3; hence there can be up to + # ~eps/1e-3 of relative cancellation error before it + + x_series = np.logspace(-20, -3.001, 200) + x_basic = np.logspace(-2.999, 0, 10, endpoint=False) + + if dtype is np.clongdouble: + if bad_arcsinh(): + pytest.skip("Trig functions of np.clongdouble values known " + "to be inaccurate on aarch64 and PPC for some " + "compilation configurations.") + # It's not guaranteed that the system-provided arc functions + # are accurate down to a few epsilons. (Eg. on Linux 64-bit) + # So, give more leeway for long complex tests here: + check(x_series, 50.0*eps) + else: + check(x_series, 2.1*eps) + check(x_basic, 2.0*eps/1e-3) + + # Check a few points + + z = np.array([1e-5*(1+1j)], dtype=dtype) + p = 9.999999999333333333e-6 + 1.000000000066666666e-5j + d = np.absolute(1-np.arctanh(z)/p) + assert_(np.all(d < 1e-15)) + + p = 1.0000000000333333333e-5 + 9.999999999666666667e-6j + d = np.absolute(1-np.arcsinh(z)/p) + assert_(np.all(d < 1e-15)) + + p = 9.999999999333333333e-6j + 1.000000000066666666e-5 + d = np.absolute(1-np.arctan(z)/p) + assert_(np.all(d < 1e-15)) + + p = 1.0000000000333333333e-5j + 9.999999999666666667e-6 + d = np.absolute(1-np.arcsin(z)/p) + assert_(np.all(d < 1e-15)) + + # Check continuity across switchover points + + def check(func, z0, d=1): + z0 = np.asarray(z0, dtype=dtype) + zp = z0 + abs(z0) * d * eps * 2 + zm = z0 - abs(z0) * d * eps * 2 + assert_(np.all(zp != zm), (zp, zm)) + + # NB: the cancellation error at the switchover is at least eps + good = (abs(func(zp) - func(zm)) < 2*eps) + assert_(np.all(good), (func, z0[~good])) + + for func in (np.arcsinh, np.arcsinh, np.arcsin, np.arctanh, np.arctan): + pts = [rp+1j*ip for rp in (-1e-3, 0, 1e-3) for ip in(-1e-3, 0, 1e-3) + if rp != 0 or ip != 0] + check(func, pts, 1) + check(func, pts, 1j) + check(func, pts, 1+1j) + + @np.errstate(all="ignore") + def test_promotion_corner_cases(self): + for func in self.funcs: + assert func(np.float16(1)).dtype == np.float16 + # Integer to low precision float promotion is a dubious choice: + assert func(np.uint8(1)).dtype == np.float16 + assert func(np.int16(1)).dtype == np.float32 + + +class TestAttributes: + def test_attributes(self): + add = ncu.add + assert_equal(add.__name__, 'add') + assert_(add.ntypes >= 18) # don't fail if types added + assert_('ii->i' in add.types) + assert_equal(add.nin, 2) + assert_equal(add.nout, 1) + assert_equal(add.identity, 0) + + def test_doc(self): + # don't bother checking the long list of kwargs, which are likely to + # change + assert_(ncu.add.__doc__.startswith( + "add(x1, x2, /, out=None, *, where=True")) + assert_(ncu.frexp.__doc__.startswith( + "frexp(x[, out1, out2], / [, out=(None, None)], *, where=True")) + + +class TestSubclass: + + def test_subclass_op(self): + + class simple(np.ndarray): + def __new__(subtype, shape): + self = np.ndarray.__new__(subtype, shape, dtype=object) + self.fill(0) + return self + + a = simple((3, 4)) + assert_equal(a+a, a) + + +class TestFrompyfunc: + + def test_identity(self): + def mul(a, b): + return a * b + + # with identity=value + mul_ufunc = np.frompyfunc(mul, nin=2, nout=1, identity=1) + assert_equal(mul_ufunc.reduce([2, 3, 4]), 24) + assert_equal(mul_ufunc.reduce(np.ones((2, 2)), axis=(0, 1)), 1) + assert_equal(mul_ufunc.reduce([]), 1) + + # with identity=None (reorderable) + mul_ufunc = np.frompyfunc(mul, nin=2, nout=1, identity=None) + assert_equal(mul_ufunc.reduce([2, 3, 4]), 24) + assert_equal(mul_ufunc.reduce(np.ones((2, 2)), axis=(0, 1)), 1) + assert_raises(ValueError, lambda: mul_ufunc.reduce([])) + + # with no identity (not reorderable) + mul_ufunc = np.frompyfunc(mul, nin=2, nout=1) + assert_equal(mul_ufunc.reduce([2, 3, 4]), 24) + assert_raises(ValueError, lambda: mul_ufunc.reduce(np.ones((2, 2)), axis=(0, 1))) + assert_raises(ValueError, lambda: mul_ufunc.reduce([])) + + +def _check_branch_cut(f, x0, dx, re_sign=1, im_sign=-1, sig_zero_ok=False, + dtype=complex): + """ + Check for a branch cut in a function. + + Assert that `x0` lies on a branch cut of function `f` and `f` is + continuous from the direction `dx`. + + Parameters + ---------- + f : func + Function to check + x0 : array-like + Point on branch cut + dx : array-like + Direction to check continuity in + re_sign, im_sign : {1, -1} + Change of sign of the real or imaginary part expected + sig_zero_ok : bool + Whether to check if the branch cut respects signed zero (if applicable) + dtype : dtype + Dtype to check (should be complex) + + """ + x0 = np.atleast_1d(x0).astype(dtype) + dx = np.atleast_1d(dx).astype(dtype) + + if np.dtype(dtype).char == 'F': + scale = np.finfo(dtype).eps * 1e2 + atol = np.float32(1e-2) + else: + scale = np.finfo(dtype).eps * 1e3 + atol = 1e-4 + + y0 = f(x0) + yp = f(x0 + dx*scale*np.absolute(x0)/np.absolute(dx)) + ym = f(x0 - dx*scale*np.absolute(x0)/np.absolute(dx)) + + assert_(np.all(np.absolute(y0.real - yp.real) < atol), (y0, yp)) + assert_(np.all(np.absolute(y0.imag - yp.imag) < atol), (y0, yp)) + assert_(np.all(np.absolute(y0.real - ym.real*re_sign) < atol), (y0, ym)) + assert_(np.all(np.absolute(y0.imag - ym.imag*im_sign) < atol), (y0, ym)) + + if sig_zero_ok: + # check that signed zeros also work as a displacement + jr = (x0.real == 0) & (dx.real != 0) + ji = (x0.imag == 0) & (dx.imag != 0) + if np.any(jr): + x = x0[jr] + x.real = ncu.NZERO + ym = f(x) + assert_(np.all(np.absolute(y0[jr].real - ym.real*re_sign) < atol), (y0[jr], ym)) + assert_(np.all(np.absolute(y0[jr].imag - ym.imag*im_sign) < atol), (y0[jr], ym)) + + if np.any(ji): + x = x0[ji] + x.imag = ncu.NZERO + ym = f(x) + assert_(np.all(np.absolute(y0[ji].real - ym.real*re_sign) < atol), (y0[ji], ym)) + assert_(np.all(np.absolute(y0[ji].imag - ym.imag*im_sign) < atol), (y0[ji], ym)) + +def test_copysign(): + assert_(np.copysign(1, -1) == -1) + with np.errstate(divide="ignore"): + assert_(1 / np.copysign(0, -1) < 0) + assert_(1 / np.copysign(0, 1) > 0) + assert_(np.signbit(np.copysign(np.nan, -1))) + assert_(not np.signbit(np.copysign(np.nan, 1))) + +def _test_nextafter(t): + one = t(1) + two = t(2) + zero = t(0) + eps = np.finfo(t).eps + assert_(np.nextafter(one, two) - one == eps) + assert_(np.nextafter(one, zero) - one < 0) + assert_(np.isnan(np.nextafter(np.nan, one))) + assert_(np.isnan(np.nextafter(one, np.nan))) + assert_(np.nextafter(one, one) == one) + +def test_nextafter(): + return _test_nextafter(np.float64) + + +def test_nextafterf(): + return _test_nextafter(np.float32) + + +@pytest.mark.skipif(np.finfo(np.double) == np.finfo(np.longdouble), + reason="long double is same as double") +@pytest.mark.xfail(condition=platform.machine().startswith("ppc64"), + reason="IBM double double") +def test_nextafterl(): + return _test_nextafter(np.longdouble) + + +def test_nextafter_0(): + for t, direction in itertools.product(np._core.sctypes['float'], (1, -1)): + # The value of tiny for double double is NaN, so we need to pass the + # assert + with suppress_warnings() as sup: + sup.filter(UserWarning) + if not np.isnan(np.finfo(t).tiny): + tiny = np.finfo(t).tiny + assert_( + 0. < direction * np.nextafter(t(0), t(direction)) < tiny) + assert_equal(np.nextafter(t(0), t(direction)) / t(2.1), direction * 0.0) + +def _test_spacing(t): + one = t(1) + eps = np.finfo(t).eps + nan = t(np.nan) + inf = t(np.inf) + with np.errstate(invalid='ignore'): + assert_equal(np.spacing(one), eps) + assert_(np.isnan(np.spacing(nan))) + assert_(np.isnan(np.spacing(inf))) + assert_(np.isnan(np.spacing(-inf))) + assert_(np.spacing(t(1e30)) != 0) + +def test_spacing(): + return _test_spacing(np.float64) + +def test_spacingf(): + return _test_spacing(np.float32) + + +@pytest.mark.skipif(np.finfo(np.double) == np.finfo(np.longdouble), + reason="long double is same as double") +@pytest.mark.xfail(condition=platform.machine().startswith("ppc64"), + reason="IBM double double") +def test_spacingl(): + return _test_spacing(np.longdouble) + +def test_spacing_gfortran(): + # Reference from this fortran file, built with gfortran 4.3.3 on linux + # 32bits: + # PROGRAM test_spacing + # INTEGER, PARAMETER :: SGL = SELECTED_REAL_KIND(p=6, r=37) + # INTEGER, PARAMETER :: DBL = SELECTED_REAL_KIND(p=13, r=200) + # + # WRITE(*,*) spacing(0.00001_DBL) + # WRITE(*,*) spacing(1.0_DBL) + # WRITE(*,*) spacing(1000._DBL) + # WRITE(*,*) spacing(10500._DBL) + # + # WRITE(*,*) spacing(0.00001_SGL) + # WRITE(*,*) spacing(1.0_SGL) + # WRITE(*,*) spacing(1000._SGL) + # WRITE(*,*) spacing(10500._SGL) + # END PROGRAM + ref = {np.float64: [1.69406589450860068E-021, + 2.22044604925031308E-016, + 1.13686837721616030E-013, + 1.81898940354585648E-012], + np.float32: [9.09494702E-13, + 1.19209290E-07, + 6.10351563E-05, + 9.76562500E-04]} + + for dt, dec_ in zip([np.float32, np.float64], (10, 20)): + x = np.array([1e-5, 1, 1000, 10500], dtype=dt) + assert_array_almost_equal(np.spacing(x), ref[dt], decimal=dec_) + +def test_nextafter_vs_spacing(): + # XXX: spacing does not handle long double yet + for t in [np.float32, np.float64]: + for _f in [1, 1e-5, 1000]: + f = t(_f) + f1 = t(_f + 1) + assert_(np.nextafter(f, f1) - f == np.spacing(f)) + +def test_pos_nan(): + """Check np.nan is a positive nan.""" + assert_(np.signbit(np.nan) == 0) + +def test_reduceat(): + """Test bug in reduceat when structured arrays are not copied.""" + db = np.dtype([('name', 'S11'), ('time', np.int64), ('value', np.float32)]) + a = np.empty([100], dtype=db) + a['name'] = 'Simple' + a['time'] = 10 + a['value'] = 100 + indx = [0, 7, 15, 25] + + h2 = [] + val1 = indx[0] + for val2 in indx[1:]: + h2.append(np.add.reduce(a['value'][val1:val2])) + val1 = val2 + h2.append(np.add.reduce(a['value'][val1:])) + h2 = np.array(h2) + + # test buffered -- this should work + h1 = np.add.reduceat(a['value'], indx) + assert_array_almost_equal(h1, h2) + + # This is when the error occurs. + # test no buffer + np.setbufsize(32) + h1 = np.add.reduceat(a['value'], indx) + np.setbufsize(ncu.UFUNC_BUFSIZE_DEFAULT) + assert_array_almost_equal(h1, h2) + +def test_reduceat_empty(): + """Reduceat should work with empty arrays""" + indices = np.array([], 'i4') + x = np.array([], 'f8') + result = np.add.reduceat(x, indices) + assert_equal(result.dtype, x.dtype) + assert_equal(result.shape, (0,)) + # Another case with a slightly different zero-sized shape + x = np.ones((5, 2)) + result = np.add.reduceat(x, [], axis=0) + assert_equal(result.dtype, x.dtype) + assert_equal(result.shape, (0, 2)) + result = np.add.reduceat(x, [], axis=1) + assert_equal(result.dtype, x.dtype) + assert_equal(result.shape, (5, 0)) + +def test_complex_nan_comparisons(): + nans = [complex(np.nan, 0), complex(0, np.nan), complex(np.nan, np.nan)] + fins = [complex(1, 0), complex(-1, 0), complex(0, 1), complex(0, -1), + complex(1, 1), complex(-1, -1), complex(0, 0)] + + with np.errstate(invalid='ignore'): + for x in nans + fins: + x = np.array([x]) + for y in nans + fins: + y = np.array([y]) + + if np.isfinite(x) and np.isfinite(y): + continue + + assert_equal(x < y, False, err_msg="%r < %r" % (x, y)) + assert_equal(x > y, False, err_msg="%r > %r" % (x, y)) + assert_equal(x <= y, False, err_msg="%r <= %r" % (x, y)) + assert_equal(x >= y, False, err_msg="%r >= %r" % (x, y)) + assert_equal(x == y, False, err_msg="%r == %r" % (x, y)) + + +def test_rint_big_int(): + # np.rint bug for large integer values on Windows 32-bit and MKL + # https://github.com/numpy/numpy/issues/6685 + val = 4607998452777363968 + # This is exactly representable in floating point + assert_equal(val, int(float(val))) + # Rint should not change the value + assert_equal(val, np.rint(val)) + + +@pytest.mark.parametrize('ftype', [np.float32, np.float64]) +def test_memoverlap_accumulate(ftype): + # Reproduces bug https://github.com/numpy/numpy/issues/15597 + arr = np.array([0.61, 0.60, 0.77, 0.41, 0.19], dtype=ftype) + out_max = np.array([0.61, 0.61, 0.77, 0.77, 0.77], dtype=ftype) + out_min = np.array([0.61, 0.60, 0.60, 0.41, 0.19], dtype=ftype) + assert_equal(np.maximum.accumulate(arr), out_max) + assert_equal(np.minimum.accumulate(arr), out_min) + +@pytest.mark.parametrize("ufunc, dtype", [ + (ufunc, t[0]) + for ufunc in UFUNCS_BINARY_ACC + for t in ufunc.types + if t[-1] == '?' and t[0] not in 'DFGMmO' +]) +def test_memoverlap_accumulate_cmp(ufunc, dtype): + if ufunc.signature: + pytest.skip('For generic signatures only') + for size in (2, 8, 32, 64, 128, 256): + arr = np.array([0, 1, 1]*size, dtype=dtype) + acc = ufunc.accumulate(arr, dtype='?') + acc_u8 = acc.view(np.uint8) + exp = np.array(list(itertools.accumulate(arr, ufunc)), dtype=np.uint8) + assert_equal(exp, acc_u8) + +@pytest.mark.parametrize("ufunc, dtype", [ + (ufunc, t[0]) + for ufunc in UFUNCS_BINARY_ACC + for t in ufunc.types + if t[0] == t[1] and t[0] == t[-1] and t[0] not in 'DFGMmO?' +]) +def test_memoverlap_accumulate_symmetric(ufunc, dtype): + if ufunc.signature: + pytest.skip('For generic signatures only') + with np.errstate(all='ignore'): + for size in (2, 8, 32, 64, 128, 256): + arr = np.array([0, 1, 2]*size).astype(dtype) + acc = ufunc.accumulate(arr, dtype=dtype) + exp = np.array(list(itertools.accumulate(arr, ufunc)), dtype=dtype) + assert_equal(exp, acc) + +def test_signaling_nan_exceptions(): + with assert_no_warnings(): + a = np.ndarray(shape=(), dtype='float32', buffer=b'\x00\xe0\xbf\xff') + np.isnan(a) + +@pytest.mark.parametrize("arr", [ + np.arange(2), + np.matrix([0, 1]), + np.matrix([[0, 1], [2, 5]]), + ]) +def test_outer_subclass_preserve(arr): + # for gh-8661 + class foo(np.ndarray): pass + actual = np.multiply.outer(arr.view(foo), arr.view(foo)) + assert actual.__class__.__name__ == 'foo' + +def test_outer_bad_subclass(): + class BadArr1(np.ndarray): + def __array_finalize__(self, obj): + # The outer call reshapes to 3 dims, try to do a bad reshape. + if self.ndim == 3: + self.shape = self.shape + (1,) + + class BadArr2(np.ndarray): + def __array_finalize__(self, obj): + if isinstance(obj, BadArr2): + # outer inserts 1-sized dims. In that case disturb them. + if self.shape[-1] == 1: + self.shape = self.shape[::-1] + + for cls in [BadArr1, BadArr2]: + arr = np.ones((2, 3)).view(cls) + with assert_raises(TypeError) as a: + # The first array gets reshaped (not the second one) + np.add.outer(arr, [1, 2]) + + # This actually works, since we only see the reshaping error: + arr = np.ones((2, 3)).view(cls) + assert type(np.add.outer([1, 2], arr)) is cls + +def test_outer_exceeds_maxdims(): + deep = np.ones((1,) * 33) + with assert_raises(ValueError): + np.add.outer(deep, deep) + +def test_bad_legacy_ufunc_silent_errors(): + # legacy ufuncs can't report errors and NumPy can't check if the GIL + # is released. So NumPy has to check after the GIL is released just to + # cover all bases. `np.power` uses/used to use this. + arr = np.arange(3).astype(np.float64) + + with pytest.raises(RuntimeError, match=r"How unexpected :\)!"): + ncu_tests.always_error(arr, arr) + + with pytest.raises(RuntimeError, match=r"How unexpected :\)!"): + # not contiguous means the fast-path cannot be taken + non_contig = arr.repeat(20).reshape(-1, 6)[:, ::2] + ncu_tests.always_error(non_contig, arr) + + with pytest.raises(RuntimeError, match=r"How unexpected :\)!"): + ncu_tests.always_error.outer(arr, arr) + + with pytest.raises(RuntimeError, match=r"How unexpected :\)!"): + ncu_tests.always_error.reduce(arr) + + with pytest.raises(RuntimeError, match=r"How unexpected :\)!"): + ncu_tests.always_error.reduceat(arr, [0, 1]) + + with pytest.raises(RuntimeError, match=r"How unexpected :\)!"): + ncu_tests.always_error.accumulate(arr) + + with pytest.raises(RuntimeError, match=r"How unexpected :\)!"): + ncu_tests.always_error.at(arr, [0, 1, 2], arr) + + +@pytest.mark.parametrize('x1', [np.arange(3.0), [0.0, 1.0, 2.0]]) +def test_bad_legacy_gufunc_silent_errors(x1): + # Verify that an exception raised in a gufunc loop propagates correctly. + # The signature of always_error_gufunc is '(i),()->()'. + with pytest.raises(RuntimeError, match=r"How unexpected :\)!"): + ncu_tests.always_error_gufunc(x1, 0.0) + + +class TestAddDocstring: + @pytest.mark.skipif(sys.flags.optimize == 2, reason="Python running -OO") + @pytest.mark.skipif(IS_PYPY, reason="PyPy does not modify tp_doc") + def test_add_same_docstring(self): + # test for attributes (which are C-level defined) + ncu.add_docstring(np.ndarray.flat, np.ndarray.flat.__doc__) + + # And typical functions: + def func(): + """docstring""" + return + + ncu.add_docstring(func, func.__doc__) + + @pytest.mark.skipif(sys.flags.optimize == 2, reason="Python running -OO") + def test_different_docstring_fails(self): + # test for attributes (which are C-level defined) + with assert_raises(RuntimeError): + ncu.add_docstring(np.ndarray.flat, "different docstring") + + # And typical functions: + def func(): + """docstring""" + return + + with assert_raises(RuntimeError): + ncu.add_docstring(func, "different docstring") + + +class TestAdd_newdoc_ufunc: + def test_ufunc_arg(self): + assert_raises(TypeError, ncu._add_newdoc_ufunc, 2, "blah") + assert_raises(ValueError, ncu._add_newdoc_ufunc, np.add, "blah") + + def test_string_arg(self): + assert_raises(TypeError, ncu._add_newdoc_ufunc, np.add, 3) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_umath_accuracy.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_umath_accuracy.py new file mode 100644 index 0000000000000000000000000000000000000000..493c7d6f2d039b7e572cff3f0ea3bdd1c46fa316 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_umath_accuracy.py @@ -0,0 +1,119 @@ +import numpy as np +import os +from os import path +import sys +import pytest +from ctypes import c_longlong, c_double, c_float, c_int, cast, pointer, POINTER +from numpy.testing import assert_array_max_ulp +from numpy.testing._private.utils import _glibc_older_than +from numpy._core._multiarray_umath import __cpu_features__ + +UNARY_UFUNCS = [obj for obj in np._core.umath.__dict__.values() if + isinstance(obj, np.ufunc)] +UNARY_OBJECT_UFUNCS = [uf for uf in UNARY_UFUNCS if "O->O" in uf.types] + +# Remove functions that do not support `floats` +UNARY_OBJECT_UFUNCS.remove(getattr(np, 'invert')) +UNARY_OBJECT_UFUNCS.remove(getattr(np, 'bitwise_count')) + +IS_AVX = __cpu_features__.get('AVX512F', False) or \ + (__cpu_features__.get('FMA3', False) and __cpu_features__.get('AVX2', False)) + +IS_AVX512FP16 = __cpu_features__.get('AVX512FP16', False) + +# only run on linux with AVX, also avoid old glibc (numpy/numpy#20448). +runtest = (sys.platform.startswith('linux') + and IS_AVX and not _glibc_older_than("2.17")) +platform_skip = pytest.mark.skipif(not runtest, + reason="avoid testing inconsistent platform " + "library implementations") + +# convert string to hex function taken from: +# https://stackoverflow.com/questions/1592158/convert-hex-to-float # +def convert(s, datatype="np.float32"): + i = int(s, 16) # convert from hex to a Python int + if (datatype == "np.float64"): + cp = pointer(c_longlong(i)) # make this into a c long long integer + fp = cast(cp, POINTER(c_double)) # cast the int pointer to a double pointer + else: + cp = pointer(c_int(i)) # make this into a c integer + fp = cast(cp, POINTER(c_float)) # cast the int pointer to a float pointer + + return fp.contents.value # dereference the pointer, get the float + +str_to_float = np.vectorize(convert) + +class TestAccuracy: + @platform_skip + def test_validate_transcendentals(self): + with np.errstate(all='ignore'): + data_dir = path.join(path.dirname(__file__), 'data') + files = os.listdir(data_dir) + files = list(filter(lambda f: f.endswith('.csv'), files)) + for filename in files: + filepath = path.join(data_dir, filename) + with open(filepath) as fid: + file_without_comments = (r for r in fid if not r[0] in ('$', '#')) + data = np.genfromtxt(file_without_comments, + dtype=('|S39','|S39','|S39',int), + names=('type','input','output','ulperr'), + delimiter=',', + skip_header=1) + npname = path.splitext(filename)[0].split('-')[3] + npfunc = getattr(np, npname) + for datatype in np.unique(data['type']): + data_subset = data[data['type'] == datatype] + inval = np.array(str_to_float(data_subset['input'].astype(str), data_subset['type'].astype(str)), dtype=eval(datatype)) + outval = np.array(str_to_float(data_subset['output'].astype(str), data_subset['type'].astype(str)), dtype=eval(datatype)) + perm = np.random.permutation(len(inval)) + inval = inval[perm] + outval = outval[perm] + maxulperr = data_subset['ulperr'].max() + assert_array_max_ulp(npfunc(inval), outval, maxulperr) + + @pytest.mark.skipif(IS_AVX512FP16, + reason = "SVML FP16 have slightly higher ULP errors") + @pytest.mark.parametrize("ufunc", UNARY_OBJECT_UFUNCS) + def test_validate_fp16_transcendentals(self, ufunc): + with np.errstate(all='ignore'): + arr = np.arange(65536, dtype=np.int16) + datafp16 = np.frombuffer(arr.tobytes(), dtype=np.float16) + datafp32 = datafp16.astype(np.float32) + assert_array_max_ulp(ufunc(datafp16), ufunc(datafp32), + maxulp=1, dtype=np.float16) + + @pytest.mark.skipif(not IS_AVX512FP16, + reason="lower ULP only apply for SVML FP16") + def test_validate_svml_fp16(self): + max_ulp_err = { + "arccos": 2.54, + "arccosh": 2.09, + "arcsin": 3.06, + "arcsinh": 1.51, + "arctan": 2.61, + "arctanh": 1.88, + "cbrt": 1.57, + "cos": 1.43, + "cosh": 1.33, + "exp2": 1.33, + "exp": 1.27, + "expm1": 0.53, + "log": 1.80, + "log10": 1.27, + "log1p": 1.88, + "log2": 1.80, + "sin": 1.88, + "sinh": 2.05, + "tan": 2.26, + "tanh": 3.00, + } + + with np.errstate(all='ignore'): + arr = np.arange(65536, dtype=np.int16) + datafp16 = np.frombuffer(arr.tobytes(), dtype=np.float16) + datafp32 = datafp16.astype(np.float32) + for func in max_ulp_err: + ufunc = getattr(np, func) + ulp = np.ceil(max_ulp_err[func]) + assert_array_max_ulp(ufunc(datafp16), ufunc(datafp32), + maxulp=ulp, dtype=np.float16) diff --git a/venv/lib/python3.12/site-packages/numpy/_core/tests/test_umath_complex.py b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_umath_complex.py new file mode 100644 index 0000000000000000000000000000000000000000..cc54c16da2e3e70595188c285c12257131ea9287 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_core/tests/test_umath_complex.py @@ -0,0 +1,622 @@ +import sys +import platform +import pytest + +import numpy as np +# import the c-extension module directly since _arg is not exported via umath +import numpy._core._multiarray_umath as ncu +from numpy.testing import ( + assert_raises, assert_equal, assert_array_equal, assert_almost_equal, assert_array_max_ulp + ) + +# TODO: branch cuts (use Pauli code) +# TODO: conj 'symmetry' +# TODO: FPU exceptions + +# At least on Windows the results of many complex functions are not conforming +# to the C99 standard. See ticket 1574. +# Ditto for Solaris (ticket 1642) and OS X on PowerPC. +#FIXME: this will probably change when we require full C99 compatibility +with np.errstate(all='ignore'): + functions_seem_flaky = ((np.exp(complex(np.inf, 0)).imag != 0) + or (np.log(complex(ncu.NZERO, 0)).imag != np.pi)) +# TODO: replace with a check on whether platform-provided C99 funcs are used +xfail_complex_tests = (not sys.platform.startswith('linux') or functions_seem_flaky) + +# TODO This can be xfail when the generator functions are got rid of. +platform_skip = pytest.mark.skipif(xfail_complex_tests, + reason="Inadequate C99 complex support") + + + +class TestCexp: + def test_simple(self): + check = check_complex_value + f = np.exp + + check(f, 1, 0, np.exp(1), 0, False) + check(f, 0, 1, np.cos(1), np.sin(1), False) + + ref = np.exp(1) * complex(np.cos(1), np.sin(1)) + check(f, 1, 1, ref.real, ref.imag, False) + + @platform_skip + def test_special_values(self): + # C99: Section G 6.3.1 + + check = check_complex_value + f = np.exp + + # cexp(+-0 + 0i) is 1 + 0i + check(f, ncu.PZERO, 0, 1, 0, False) + check(f, ncu.NZERO, 0, 1, 0, False) + + # cexp(x + infi) is nan + nani for finite x and raises 'invalid' FPU + # exception + check(f, 1, np.inf, np.nan, np.nan) + check(f, -1, np.inf, np.nan, np.nan) + check(f, 0, np.inf, np.nan, np.nan) + + # cexp(inf + 0i) is inf + 0i + check(f, np.inf, 0, np.inf, 0) + + # cexp(-inf + yi) is +0 * (cos(y) + i sin(y)) for finite y + check(f, -np.inf, 1, ncu.PZERO, ncu.PZERO) + check(f, -np.inf, 0.75 * np.pi, ncu.NZERO, ncu.PZERO) + + # cexp(inf + yi) is +inf * (cos(y) + i sin(y)) for finite y + check(f, np.inf, 1, np.inf, np.inf) + check(f, np.inf, 0.75 * np.pi, -np.inf, np.inf) + + # cexp(-inf + inf i) is +-0 +- 0i (signs unspecified) + def _check_ninf_inf(dummy): + msgform = "cexp(-inf, inf) is (%f, %f), expected (+-0, +-0)" + with np.errstate(invalid='ignore'): + z = f(np.array(complex(-np.inf, np.inf))) + if z.real != 0 or z.imag != 0: + raise AssertionError(msgform % (z.real, z.imag)) + + _check_ninf_inf(None) + + # cexp(inf + inf i) is +-inf + NaNi and raised invalid FPU ex. + def _check_inf_inf(dummy): + msgform = "cexp(inf, inf) is (%f, %f), expected (+-inf, nan)" + with np.errstate(invalid='ignore'): + z = f(np.array(complex(np.inf, np.inf))) + if not np.isinf(z.real) or not np.isnan(z.imag): + raise AssertionError(msgform % (z.real, z.imag)) + + _check_inf_inf(None) + + # cexp(-inf + nan i) is +-0 +- 0i + def _check_ninf_nan(dummy): + msgform = "cexp(-inf, nan) is (%f, %f), expected (+-0, +-0)" + with np.errstate(invalid='ignore'): + z = f(np.array(complex(-np.inf, np.nan))) + if z.real != 0 or z.imag != 0: + raise AssertionError(msgform % (z.real, z.imag)) + + _check_ninf_nan(None) + + # cexp(inf + nan i) is +-inf + nan + def _check_inf_nan(dummy): + msgform = "cexp(-inf, nan) is (%f, %f), expected (+-inf, nan)" + with np.errstate(invalid='ignore'): + z = f(np.array(complex(np.inf, np.nan))) + if not np.isinf(z.real) or not np.isnan(z.imag): + raise AssertionError(msgform % (z.real, z.imag)) + + _check_inf_nan(None) + + # cexp(nan + yi) is nan + nani for y != 0 (optional: raises invalid FPU + # ex) + check(f, np.nan, 1, np.nan, np.nan) + check(f, np.nan, -1, np.nan, np.nan) + + check(f, np.nan, np.inf, np.nan, np.nan) + check(f, np.nan, -np.inf, np.nan, np.nan) + + # cexp(nan + nani) is nan + nani + check(f, np.nan, np.nan, np.nan, np.nan) + + # TODO This can be xfail when the generator functions are got rid of. + @pytest.mark.skip(reason="cexp(nan + 0I) is wrong on most platforms") + def test_special_values2(self): + # XXX: most implementations get it wrong here (including glibc <= 2.10) + # cexp(nan + 0i) is nan + 0i + check = check_complex_value + f = np.exp + + check(f, np.nan, 0, np.nan, 0) + +class TestClog: + def test_simple(self): + x = np.array([1+0j, 1+2j]) + y_r = np.log(np.abs(x)) + 1j * np.angle(x) + y = np.log(x) + assert_almost_equal(y, y_r) + + @platform_skip + @pytest.mark.skipif(platform.machine() == "armv5tel", reason="See gh-413.") + def test_special_values(self): + xl = [] + yl = [] + + # From C99 std (Sec 6.3.2) + # XXX: check exceptions raised + # --- raise for invalid fails. + + # clog(-0 + i0) returns -inf + i pi and raises the 'divide-by-zero' + # floating-point exception. + with np.errstate(divide='raise'): + x = np.array([ncu.NZERO], dtype=complex) + y = complex(-np.inf, np.pi) + assert_raises(FloatingPointError, np.log, x) + with np.errstate(divide='ignore'): + assert_almost_equal(np.log(x), y) + + xl.append(x) + yl.append(y) + + # clog(+0 + i0) returns -inf + i0 and raises the 'divide-by-zero' + # floating-point exception. + with np.errstate(divide='raise'): + x = np.array([0], dtype=complex) + y = complex(-np.inf, 0) + assert_raises(FloatingPointError, np.log, x) + with np.errstate(divide='ignore'): + assert_almost_equal(np.log(x), y) + + xl.append(x) + yl.append(y) + + # clog(x + i inf returns +inf + i pi /2, for finite x. + x = np.array([complex(1, np.inf)], dtype=complex) + y = complex(np.inf, 0.5 * np.pi) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + x = np.array([complex(-1, np.inf)], dtype=complex) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + # clog(x + iNaN) returns NaN + iNaN and optionally raises the + # 'invalid' floating- point exception, for finite x. + with np.errstate(invalid='raise'): + x = np.array([complex(1., np.nan)], dtype=complex) + y = complex(np.nan, np.nan) + #assert_raises(FloatingPointError, np.log, x) + with np.errstate(invalid='ignore'): + assert_almost_equal(np.log(x), y) + + xl.append(x) + yl.append(y) + + with np.errstate(invalid='raise'): + x = np.array([np.inf + 1j * np.nan], dtype=complex) + #assert_raises(FloatingPointError, np.log, x) + with np.errstate(invalid='ignore'): + assert_almost_equal(np.log(x), y) + + xl.append(x) + yl.append(y) + + # clog(- inf + iy) returns +inf + ipi , for finite positive-signed y. + x = np.array([-np.inf + 1j], dtype=complex) + y = complex(np.inf, np.pi) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + # clog(+ inf + iy) returns +inf + i0, for finite positive-signed y. + x = np.array([np.inf + 1j], dtype=complex) + y = complex(np.inf, 0) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + # clog(- inf + i inf) returns +inf + i3pi /4. + x = np.array([complex(-np.inf, np.inf)], dtype=complex) + y = complex(np.inf, 0.75 * np.pi) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + # clog(+ inf + i inf) returns +inf + ipi /4. + x = np.array([complex(np.inf, np.inf)], dtype=complex) + y = complex(np.inf, 0.25 * np.pi) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + # clog(+/- inf + iNaN) returns +inf + iNaN. + x = np.array([complex(np.inf, np.nan)], dtype=complex) + y = complex(np.inf, np.nan) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + x = np.array([complex(-np.inf, np.nan)], dtype=complex) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + # clog(NaN + iy) returns NaN + iNaN and optionally raises the + # 'invalid' floating-point exception, for finite y. + x = np.array([complex(np.nan, 1)], dtype=complex) + y = complex(np.nan, np.nan) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + # clog(NaN + i inf) returns +inf + iNaN. + x = np.array([complex(np.nan, np.inf)], dtype=complex) + y = complex(np.inf, np.nan) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + # clog(NaN + iNaN) returns NaN + iNaN. + x = np.array([complex(np.nan, np.nan)], dtype=complex) + y = complex(np.nan, np.nan) + assert_almost_equal(np.log(x), y) + xl.append(x) + yl.append(y) + + # clog(conj(z)) = conj(clog(z)). + xa = np.array(xl, dtype=complex) + ya = np.array(yl, dtype=complex) + with np.errstate(divide='ignore'): + for i in range(len(xa)): + assert_almost_equal(np.log(xa[i].conj()), ya[i].conj()) + + +class TestCsqrt: + + def test_simple(self): + # sqrt(1) + check_complex_value(np.sqrt, 1, 0, 1, 0) + + # sqrt(1i) + rres = 0.5*np.sqrt(2) + ires = rres + check_complex_value(np.sqrt, 0, 1, rres, ires, False) + + # sqrt(-1) + check_complex_value(np.sqrt, -1, 0, 0, 1) + + def test_simple_conjugate(self): + ref = np.conj(np.sqrt(complex(1, 1))) + + def f(z): + return np.sqrt(np.conj(z)) + + check_complex_value(f, 1, 1, ref.real, ref.imag, False) + + #def test_branch_cut(self): + # _check_branch_cut(f, -1, 0, 1, -1) + + @platform_skip + def test_special_values(self): + # C99: Sec G 6.4.2 + + check = check_complex_value + f = np.sqrt + + # csqrt(+-0 + 0i) is 0 + 0i + check(f, ncu.PZERO, 0, 0, 0) + check(f, ncu.NZERO, 0, 0, 0) + + # csqrt(x + infi) is inf + infi for any x (including NaN) + check(f, 1, np.inf, np.inf, np.inf) + check(f, -1, np.inf, np.inf, np.inf) + + check(f, ncu.PZERO, np.inf, np.inf, np.inf) + check(f, ncu.NZERO, np.inf, np.inf, np.inf) + check(f, np.inf, np.inf, np.inf, np.inf) + check(f, -np.inf, np.inf, np.inf, np.inf) + check(f, -np.nan, np.inf, np.inf, np.inf) + + # csqrt(x + nani) is nan + nani for any finite x + check(f, 1, np.nan, np.nan, np.nan) + check(f, -1, np.nan, np.nan, np.nan) + check(f, 0, np.nan, np.nan, np.nan) + + # csqrt(-inf + yi) is +0 + infi for any finite y > 0 + check(f, -np.inf, 1, ncu.PZERO, np.inf) + + # csqrt(inf + yi) is +inf + 0i for any finite y > 0 + check(f, np.inf, 1, np.inf, ncu.PZERO) + + # csqrt(-inf + nani) is nan +- infi (both +i infi are valid) + def _check_ninf_nan(dummy): + msgform = "csqrt(-inf, nan) is (%f, %f), expected (nan, +-inf)" + z = np.sqrt(np.array(complex(-np.inf, np.nan))) + #Fixme: ugly workaround for isinf bug. + with np.errstate(invalid='ignore'): + if not (np.isnan(z.real) and np.isinf(z.imag)): + raise AssertionError(msgform % (z.real, z.imag)) + + _check_ninf_nan(None) + + # csqrt(+inf + nani) is inf + nani + check(f, np.inf, np.nan, np.inf, np.nan) + + # csqrt(nan + yi) is nan + nani for any finite y (infinite handled in x + # + nani) + check(f, np.nan, 0, np.nan, np.nan) + check(f, np.nan, 1, np.nan, np.nan) + check(f, np.nan, np.nan, np.nan, np.nan) + + # XXX: check for conj(csqrt(z)) == csqrt(conj(z)) (need to fix branch + # cuts first) + +class TestCpow: + def setup_method(self): + self.olderr = np.seterr(invalid='ignore') + + def teardown_method(self): + np.seterr(**self.olderr) + + def test_simple(self): + x = np.array([1+1j, 0+2j, 1+2j, np.inf, np.nan]) + y_r = x ** 2 + y = np.power(x, 2) + assert_almost_equal(y, y_r) + + def test_scalar(self): + x = np.array([1, 1j, 2, 2.5+.37j, np.inf, np.nan]) + y = np.array([1, 1j, -0.5+1.5j, -0.5+1.5j, 2, 3]) + lx = list(range(len(x))) + + # Hardcode the expected `builtins.complex` values, + # as complex exponentiation is broken as of bpo-44698 + p_r = [ + 1+0j, + 0.20787957635076193+0j, + 0.35812203996480685+0.6097119028618724j, + 0.12659112128185032+0.48847676699581527j, + complex(np.inf, np.nan), + complex(np.nan, np.nan), + ] + + n_r = [x[i] ** y[i] for i in lx] + for i in lx: + assert_almost_equal(n_r[i], p_r[i], err_msg='Loop %d\n' % i) + + def test_array(self): + x = np.array([1, 1j, 2, 2.5+.37j, np.inf, np.nan]) + y = np.array([1, 1j, -0.5+1.5j, -0.5+1.5j, 2, 3]) + lx = list(range(len(x))) + + # Hardcode the expected `builtins.complex` values, + # as complex exponentiation is broken as of bpo-44698 + p_r = [ + 1+0j, + 0.20787957635076193+0j, + 0.35812203996480685+0.6097119028618724j, + 0.12659112128185032+0.48847676699581527j, + complex(np.inf, np.nan), + complex(np.nan, np.nan), + ] + + n_r = x ** y + for i in lx: + assert_almost_equal(n_r[i], p_r[i], err_msg='Loop %d\n' % i) + +class TestCabs: + def setup_method(self): + self.olderr = np.seterr(invalid='ignore') + + def teardown_method(self): + np.seterr(**self.olderr) + + def test_simple(self): + x = np.array([1+1j, 0+2j, 1+2j, np.inf, np.nan]) + y_r = np.array([np.sqrt(2.), 2, np.sqrt(5), np.inf, np.nan]) + y = np.abs(x) + assert_almost_equal(y, y_r) + + def test_fabs(self): + # Test that np.abs(x +- 0j) == np.abs(x) (as mandated by C99 for cabs) + x = np.array([1+0j], dtype=complex) + assert_array_equal(np.abs(x), np.real(x)) + + x = np.array([complex(1, ncu.NZERO)], dtype=complex) + assert_array_equal(np.abs(x), np.real(x)) + + x = np.array([complex(np.inf, ncu.NZERO)], dtype=complex) + assert_array_equal(np.abs(x), np.real(x)) + + x = np.array([complex(np.nan, ncu.NZERO)], dtype=complex) + assert_array_equal(np.abs(x), np.real(x)) + + def test_cabs_inf_nan(self): + x, y = [], [] + + # cabs(+-nan + nani) returns nan + x.append(np.nan) + y.append(np.nan) + check_real_value(np.abs, np.nan, np.nan, np.nan) + + x.append(np.nan) + y.append(-np.nan) + check_real_value(np.abs, -np.nan, np.nan, np.nan) + + # According to C99 standard, if exactly one of the real/part is inf and + # the other nan, then cabs should return inf + x.append(np.inf) + y.append(np.nan) + check_real_value(np.abs, np.inf, np.nan, np.inf) + + x.append(-np.inf) + y.append(np.nan) + check_real_value(np.abs, -np.inf, np.nan, np.inf) + + # cabs(conj(z)) == conj(cabs(z)) (= cabs(z)) + def f(a): + return np.abs(np.conj(a)) + + def g(a, b): + return np.abs(complex(a, b)) + + xa = np.array(x, dtype=complex) + assert len(xa) == len(x) == len(y) + for xi, yi in zip(x, y): + ref = g(xi, yi) + check_real_value(f, xi, yi, ref) + +class TestCarg: + def test_simple(self): + check_real_value(ncu._arg, 1, 0, 0, False) + check_real_value(ncu._arg, 0, 1, 0.5*np.pi, False) + + check_real_value(ncu._arg, 1, 1, 0.25*np.pi, False) + check_real_value(ncu._arg, ncu.PZERO, ncu.PZERO, ncu.PZERO) + + # TODO This can be xfail when the generator functions are got rid of. + @pytest.mark.skip( + reason="Complex arithmetic with signed zero fails on most platforms") + def test_zero(self): + # carg(-0 +- 0i) returns +- pi + check_real_value(ncu._arg, ncu.NZERO, ncu.PZERO, np.pi, False) + check_real_value(ncu._arg, ncu.NZERO, ncu.NZERO, -np.pi, False) + + # carg(+0 +- 0i) returns +- 0 + check_real_value(ncu._arg, ncu.PZERO, ncu.PZERO, ncu.PZERO) + check_real_value(ncu._arg, ncu.PZERO, ncu.NZERO, ncu.NZERO) + + # carg(x +- 0i) returns +- 0 for x > 0 + check_real_value(ncu._arg, 1, ncu.PZERO, ncu.PZERO, False) + check_real_value(ncu._arg, 1, ncu.NZERO, ncu.NZERO, False) + + # carg(x +- 0i) returns +- pi for x < 0 + check_real_value(ncu._arg, -1, ncu.PZERO, np.pi, False) + check_real_value(ncu._arg, -1, ncu.NZERO, -np.pi, False) + + # carg(+- 0 + yi) returns pi/2 for y > 0 + check_real_value(ncu._arg, ncu.PZERO, 1, 0.5 * np.pi, False) + check_real_value(ncu._arg, ncu.NZERO, 1, 0.5 * np.pi, False) + + # carg(+- 0 + yi) returns -pi/2 for y < 0 + check_real_value(ncu._arg, ncu.PZERO, -1, 0.5 * np.pi, False) + check_real_value(ncu._arg, ncu.NZERO, -1, -0.5 * np.pi, False) + + #def test_branch_cuts(self): + # _check_branch_cut(ncu._arg, -1, 1j, -1, 1) + + def test_special_values(self): + # carg(-np.inf +- yi) returns +-pi for finite y > 0 + check_real_value(ncu._arg, -np.inf, 1, np.pi, False) + check_real_value(ncu._arg, -np.inf, -1, -np.pi, False) + + # carg(np.inf +- yi) returns +-0 for finite y > 0 + check_real_value(ncu._arg, np.inf, 1, ncu.PZERO, False) + check_real_value(ncu._arg, np.inf, -1, ncu.NZERO, False) + + # carg(x +- np.infi) returns +-pi/2 for finite x + check_real_value(ncu._arg, 1, np.inf, 0.5 * np.pi, False) + check_real_value(ncu._arg, 1, -np.inf, -0.5 * np.pi, False) + + # carg(-np.inf +- np.infi) returns +-3pi/4 + check_real_value(ncu._arg, -np.inf, np.inf, 0.75 * np.pi, False) + check_real_value(ncu._arg, -np.inf, -np.inf, -0.75 * np.pi, False) + + # carg(np.inf +- np.infi) returns +-pi/4 + check_real_value(ncu._arg, np.inf, np.inf, 0.25 * np.pi, False) + check_real_value(ncu._arg, np.inf, -np.inf, -0.25 * np.pi, False) + + # carg(x + yi) returns np.nan if x or y is nan + check_real_value(ncu._arg, np.nan, 0, np.nan, False) + check_real_value(ncu._arg, 0, np.nan, np.nan, False) + + check_real_value(ncu._arg, np.nan, np.inf, np.nan, False) + check_real_value(ncu._arg, np.inf, np.nan, np.nan, False) + + +def check_real_value(f, x1, y1, x, exact=True): + z1 = np.array([complex(x1, y1)]) + if exact: + assert_equal(f(z1), x) + else: + assert_almost_equal(f(z1), x) + + +def check_complex_value(f, x1, y1, x2, y2, exact=True): + z1 = np.array([complex(x1, y1)]) + z2 = complex(x2, y2) + with np.errstate(invalid='ignore'): + if exact: + assert_equal(f(z1), z2) + else: + assert_almost_equal(f(z1), z2) + +class TestSpecialComplexAVX: + @pytest.mark.parametrize("stride", [-4,-2,-1,1,2,4]) + @pytest.mark.parametrize("astype", [np.complex64, np.complex128]) + def test_array(self, stride, astype): + arr = np.array([complex(np.nan , np.nan), + complex(np.nan , np.inf), + complex(np.inf , np.nan), + complex(np.inf , np.inf), + complex(0. , np.inf), + complex(np.inf , 0.), + complex(0. , 0.), + complex(0. , np.nan), + complex(np.nan , 0.)], dtype=astype) + abs_true = np.array([np.nan, np.inf, np.inf, np.inf, np.inf, np.inf, 0., np.nan, np.nan], dtype=arr.real.dtype) + sq_true = np.array([complex(np.nan, np.nan), + complex(np.nan, np.nan), + complex(np.nan, np.nan), + complex(np.nan, np.inf), + complex(-np.inf, np.nan), + complex(np.inf, np.nan), + complex(0., 0.), + complex(np.nan, np.nan), + complex(np.nan, np.nan)], dtype=astype) + with np.errstate(invalid='ignore'): + assert_equal(np.abs(arr[::stride]), abs_true[::stride]) + assert_equal(np.square(arr[::stride]), sq_true[::stride]) + +class TestComplexAbsoluteAVX: + @pytest.mark.parametrize("arraysize", [1,2,3,4,5,6,7,8,9,10,11,13,15,17,18,19]) + @pytest.mark.parametrize("stride", [-4,-3,-2,-1,1,2,3,4]) + @pytest.mark.parametrize("astype", [np.complex64, np.complex128]) + # test to ensure masking and strides work as intended in the AVX implementation + def test_array(self, arraysize, stride, astype): + arr = np.ones(arraysize, dtype=astype) + abs_true = np.ones(arraysize, dtype=arr.real.dtype) + assert_equal(np.abs(arr[::stride]), abs_true[::stride]) + +# Testcase taken as is from https://github.com/numpy/numpy/issues/16660 +class TestComplexAbsoluteMixedDTypes: + @pytest.mark.parametrize("stride", [-4,-3,-2,-1,1,2,3,4]) + @pytest.mark.parametrize("astype", [np.complex64, np.complex128]) + @pytest.mark.parametrize("func", ['abs', 'square', 'conjugate']) + + def test_array(self, stride, astype, func): + dtype = [('template_id', 'U') + uni_arr2 = str_arr.astype(').itemsize` instead.", + "byte_bounds": "Now it's available under `np.lib.array_utils.byte_bounds`", + "compare_chararrays": + "It's still available as `np.char.compare_chararrays`.", + "format_parser": "It's still available as `np.rec.format_parser`.", + "alltrue": "Use `np.all` instead.", + "sometrue": "Use `np.any` instead.", +} diff --git a/venv/lib/python3.12/site-packages/numpy/_globals.py b/venv/lib/python3.12/site-packages/numpy/_globals.py new file mode 100644 index 0000000000000000000000000000000000000000..a1474177fef88fc8c68524f7fc04965ee7f89b05 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_globals.py @@ -0,0 +1,95 @@ +""" +Module defining global singleton classes. + +This module raises a RuntimeError if an attempt to reload it is made. In that +way the identities of the classes defined here are fixed and will remain so +even if numpy itself is reloaded. In particular, a function like the following +will still work correctly after numpy is reloaded:: + + def foo(arg=np._NoValue): + if arg is np._NoValue: + ... + +That was not the case when the singleton classes were defined in the numpy +``__init__.py`` file. See gh-7844 for a discussion of the reload problem that +motivated this module. + +""" +import enum + +from ._utils import set_module as _set_module + +__all__ = ['_NoValue', '_CopyMode'] + + +# Disallow reloading this module so as to preserve the identities of the +# classes defined here. +if '_is_loaded' in globals(): + raise RuntimeError('Reloading numpy._globals is not allowed') +_is_loaded = True + + +class _NoValueType: + """Special keyword value. + + The instance of this class may be used as the default value assigned to a + keyword if no other obvious default (e.g., `None`) is suitable, + + Common reasons for using this keyword are: + + - A new keyword is added to a function, and that function forwards its + inputs to another function or method which can be defined outside of + NumPy. For example, ``np.std(x)`` calls ``x.std``, so when a ``keepdims`` + keyword was added that could only be forwarded if the user explicitly + specified ``keepdims``; downstream array libraries may not have added + the same keyword, so adding ``x.std(..., keepdims=keepdims)`` + unconditionally could have broken previously working code. + - A keyword is being deprecated, and a deprecation warning must only be + emitted when the keyword is used. + + """ + __instance = None + def __new__(cls): + # ensure that only one instance exists + if not cls.__instance: + cls.__instance = super().__new__(cls) + return cls.__instance + + def __repr__(self): + return "" + + +_NoValue = _NoValueType() + + +@_set_module("numpy") +class _CopyMode(enum.Enum): + """ + An enumeration for the copy modes supported + by numpy.copy() and numpy.array(). The following three modes are supported, + + - ALWAYS: This means that a deep copy of the input + array will always be taken. + - IF_NEEDED: This means that a deep copy of the input + array will be taken only if necessary. + - NEVER: This means that the deep copy will never be taken. + If a copy cannot be avoided then a `ValueError` will be + raised. + + Note that the buffer-protocol could in theory do copies. NumPy currently + assumes an object exporting the buffer protocol will never do this. + """ + + ALWAYS = True + NEVER = False + IF_NEEDED = 2 + + def __bool__(self): + # For backwards compatibility + if self == _CopyMode.ALWAYS: + return True + + if self == _CopyMode.NEVER: + return False + + raise ValueError(f"{self} is neither True nor False.") diff --git a/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__init__.py b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391 diff --git a/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/__init__.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/__init__.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..f16e8abf211d0a7b8f0c5bab5a110c1109f0570d Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/__init__.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/hook-numpy.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/hook-numpy.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..62aeda61126ad68e587239713ae29f14fb86d7c0 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/hook-numpy.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/pyinstaller-smoke.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/pyinstaller-smoke.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..e1b0e800da8bd1d4540ba52c6149e79ce2b3f509 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/pyinstaller-smoke.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/test_pyinstaller.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/test_pyinstaller.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..8b3479b1fad2c4f7157093125f4ceff5d894752a Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/__pycache__/test_pyinstaller.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_pyinstaller/hook-numpy.py b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/hook-numpy.py new file mode 100644 index 0000000000000000000000000000000000000000..84f3626b43d572c58d48374a5e6b18e19b9075e5 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/hook-numpy.py @@ -0,0 +1,36 @@ +"""This hook should collect all binary files and any hidden modules that numpy +needs. + +Our (some-what inadequate) docs for writing PyInstaller hooks are kept here: +https://pyinstaller.readthedocs.io/en/stable/hooks.html + +""" +from PyInstaller.compat import is_conda, is_pure_conda +from PyInstaller.utils.hooks import collect_dynamic_libs, is_module_satisfies + +# Collect all DLLs inside numpy's installation folder, dump them into built +# app's root. +binaries = collect_dynamic_libs("numpy", ".") + +# If using Conda without any non-conda virtual environment manager: +if is_pure_conda: + # Assume running the NumPy from Conda-forge and collect it's DLLs from the + # communal Conda bin directory. DLLs from NumPy's dependencies must also be + # collected to capture MKL, OpenBlas, OpenMP, etc. + from PyInstaller.utils.hooks import conda_support + datas = conda_support.collect_dynamic_libs("numpy", dependencies=True) + +# Submodules PyInstaller cannot detect. `_dtype_ctypes` is only imported +# from C and `_multiarray_tests` is used in tests (which are not packed). +hiddenimports = ['numpy._core._dtype_ctypes', 'numpy._core._multiarray_tests'] + +# Remove testing and building code and packages that are referenced throughout +# NumPy but are not really dependencies. +excludedimports = [ + "scipy", + "pytest", + "f2py", + "setuptools", + "distutils", + "numpy.distutils", +] diff --git a/venv/lib/python3.12/site-packages/numpy/_pyinstaller/pyinstaller-smoke.py b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/pyinstaller-smoke.py new file mode 100644 index 0000000000000000000000000000000000000000..eb28070e38baf80223fe0178ac0a7c0f5732a2c8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/pyinstaller-smoke.py @@ -0,0 +1,32 @@ +"""A crude *bit of everything* smoke test to verify PyInstaller compatibility. + +PyInstaller typically goes wrong by forgetting to package modules, extension +modules or shared libraries. This script should aim to touch as many of those +as possible in an attempt to trip a ModuleNotFoundError or a DLL load failure +due to an uncollected resource. Missing resources are unlikely to lead to +arithmetic errors so there's generally no need to verify any calculation's +output - merely that it made it to the end OK. This script should not +explicitly import any of numpy's submodules as that gives PyInstaller undue +hints that those submodules exist and should be collected (accessing implicitly +loaded submodules is OK). + +""" +import numpy as np + +a = np.arange(1., 10.).reshape((3, 3)) % 5 +np.linalg.det(a) +a @ a +a @ a.T +np.linalg.inv(a) +np.sin(np.exp(a)) +np.linalg.svd(a) +np.linalg.eigh(a) + +np.unique(np.random.randint(0, 10, 100)) +np.sort(np.random.uniform(0, 10, 100)) + +np.fft.fft(np.exp(2j * np.pi * np.arange(8) / 8)) +np.ma.masked_array(np.arange(10), np.random.rand(10) < .5).sum() +np.polynomial.Legendre([7, 8, 9]).roots() + +print("I made it!") diff --git a/venv/lib/python3.12/site-packages/numpy/_pyinstaller/test_pyinstaller.py b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/test_pyinstaller.py new file mode 100644 index 0000000000000000000000000000000000000000..a9061da19b88c4243a3fd28bf05fd2986292d836 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_pyinstaller/test_pyinstaller.py @@ -0,0 +1,35 @@ +import subprocess +from pathlib import Path + +import pytest + + +# PyInstaller has been very unproactive about replacing 'imp' with 'importlib'. +@pytest.mark.filterwarnings('ignore::DeprecationWarning') +# It also leaks io.BytesIO()s. +@pytest.mark.filterwarnings('ignore::ResourceWarning') +@pytest.mark.parametrize("mode", ["--onedir", "--onefile"]) +@pytest.mark.slow +def test_pyinstaller(mode, tmp_path): + """Compile and run pyinstaller-smoke.py using PyInstaller.""" + + pyinstaller_cli = pytest.importorskip("PyInstaller.__main__").run + + source = Path(__file__).with_name("pyinstaller-smoke.py").resolve() + args = [ + # Place all generated files in ``tmp_path``. + '--workpath', str(tmp_path / "build"), + '--distpath', str(tmp_path / "dist"), + '--specpath', str(tmp_path), + mode, + str(source), + ] + pyinstaller_cli(args) + + if mode == "--onefile": + exe = tmp_path / "dist" / source.stem + else: + exe = tmp_path / "dist" / source.stem / source.stem + + p = subprocess.run([str(exe)], check=True, stdout=subprocess.PIPE) + assert p.stdout.strip() == b"I made it!" diff --git a/venv/lib/python3.12/site-packages/numpy/_pytesttester.py b/venv/lib/python3.12/site-packages/numpy/_pytesttester.py new file mode 100644 index 0000000000000000000000000000000000000000..4548fc6877ec272ca90157a843e03e5219f499e3 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_pytesttester.py @@ -0,0 +1,199 @@ +""" +Pytest test running. + +This module implements the ``test()`` function for NumPy modules. The usual +boiler plate for doing that is to put the following in the module +``__init__.py`` file:: + + from numpy._pytesttester import PytestTester + test = PytestTester(__name__) + del PytestTester + + +Warnings filtering and other runtime settings should be dealt with in the +``pytest.ini`` file in the numpy repo root. The behavior of the test depends on +whether or not that file is found as follows: + +* ``pytest.ini`` is present (develop mode) + All warnings except those explicitly filtered out are raised as error. +* ``pytest.ini`` is absent (release mode) + DeprecationWarnings and PendingDeprecationWarnings are ignored, other + warnings are passed through. + +In practice, tests run from the numpy repo are run in development mode with +``spin``, through the standard ``spin test`` invocation or from an inplace +build with ``pytest numpy``. + +This module is imported by every numpy subpackage, so lies at the top level to +simplify circular import issues. For the same reason, it contains no numpy +imports at module scope, instead importing numpy within function calls. +""" +import sys +import os + +__all__ = ['PytestTester'] + + +def _show_numpy_info(): + import numpy as np + + print("NumPy version %s" % np.__version__) + info = np.lib._utils_impl._opt_info() + print("NumPy CPU features: ", (info if info else 'nothing enabled')) + + +class PytestTester: + """ + Pytest test runner. + + A test function is typically added to a package's __init__.py like so:: + + from numpy._pytesttester import PytestTester + test = PytestTester(__name__).test + del PytestTester + + Calling this test function finds and runs all tests associated with the + module and all its sub-modules. + + Attributes + ---------- + module_name : str + Full path to the package to test. + + Parameters + ---------- + module_name : module name + The name of the module to test. + + Notes + ----- + Unlike the previous ``nose``-based implementation, this class is not + publicly exposed as it performs some ``numpy``-specific warning + suppression. + + """ + def __init__(self, module_name): + self.module_name = module_name + + def __call__(self, label='fast', verbose=1, extra_argv=None, + doctests=False, coverage=False, durations=-1, tests=None): + """ + Run tests for module using pytest. + + Parameters + ---------- + label : {'fast', 'full'}, optional + Identifies the tests to run. When set to 'fast', tests decorated + with `pytest.mark.slow` are skipped, when 'full', the slow marker + is ignored. + verbose : int, optional + Verbosity value for test outputs, in the range 1-3. Default is 1. + extra_argv : list, optional + List with any extra arguments to pass to pytests. + doctests : bool, optional + .. note:: Not supported + coverage : bool, optional + If True, report coverage of NumPy code. Default is False. + Requires installation of (pip) pytest-cov. + durations : int, optional + If < 0, do nothing, If 0, report time of all tests, if > 0, + report the time of the slowest `timer` tests. Default is -1. + tests : test or list of tests + Tests to be executed with pytest '--pyargs' + + Returns + ------- + result : bool + Return True on success, false otherwise. + + Notes + ----- + Each NumPy module exposes `test` in its namespace to run all tests for + it. For example, to run all tests for numpy.lib: + + >>> np.lib.test() #doctest: +SKIP + + Examples + -------- + >>> result = np.lib.test() #doctest: +SKIP + ... + 1023 passed, 2 skipped, 6 deselected, 1 xfailed in 10.39 seconds + >>> result + True + + """ + import pytest + import warnings + + module = sys.modules[self.module_name] + module_path = os.path.abspath(module.__path__[0]) + + # setup the pytest arguments + pytest_args = ["-l"] + + # offset verbosity. The "-q" cancels a "-v". + pytest_args += ["-q"] + + if sys.version_info < (3, 12): + with warnings.catch_warnings(): + warnings.simplefilter("always") + # Filter out distutils cpu warnings (could be localized to + # distutils tests). ASV has problems with top level import, + # so fetch module for suppression here. + from numpy.distutils import cpuinfo + + # Filter out annoying import messages. Want these in both develop and + # release mode. + pytest_args += [ + "-W ignore:Not importing directory", + "-W ignore:numpy.dtype size changed", + "-W ignore:numpy.ufunc size changed", + "-W ignore::UserWarning:cpuinfo", + ] + + # When testing matrices, ignore their PendingDeprecationWarnings + pytest_args += [ + "-W ignore:the matrix subclass is not", + "-W ignore:Importing from numpy.matlib is", + ] + + if doctests: + pytest_args += ["--doctest-modules"] + + if extra_argv: + pytest_args += list(extra_argv) + + if verbose > 1: + pytest_args += ["-" + "v"*(verbose - 1)] + + if coverage: + pytest_args += ["--cov=" + module_path] + + if label == "fast": + # not importing at the top level to avoid circular import of module + from numpy.testing import IS_PYPY + if IS_PYPY: + pytest_args += ["-m", "not slow and not slow_pypy"] + else: + pytest_args += ["-m", "not slow"] + + elif label != "full": + pytest_args += ["-m", label] + + if durations >= 0: + pytest_args += ["--durations=%s" % durations] + + if tests is None: + tests = [self.module_name] + + pytest_args += ["--pyargs"] + list(tests) + + # run tests. + _show_numpy_info() + + try: + code = pytest.main(pytest_args) + except SystemExit as exc: + code = exc.code + + return code == 0 diff --git a/venv/lib/python3.12/site-packages/numpy/_pytesttester.pyi b/venv/lib/python3.12/site-packages/numpy/_pytesttester.pyi new file mode 100644 index 0000000000000000000000000000000000000000..67ac87b33de164c710a25110d45545e24a06d42e --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_pytesttester.pyi @@ -0,0 +1,18 @@ +from collections.abc import Iterable +from typing import Literal as L + +__all__: list[str] + +class PytestTester: + module_name: str + def __init__(self, module_name: str) -> None: ... + def __call__( + self, + label: L["fast", "full"] = ..., + verbose: int = ..., + extra_argv: None | Iterable[str] = ..., + doctests: L[False] = ..., + coverage: bool = ..., + durations: int = ..., + tests: None | Iterable[str] = ..., + ) -> bool: ... diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/__init__.py b/venv/lib/python3.12/site-packages/numpy/_typing/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..01c5a7c4cf78f17f3a27131dee1f2728763fb526 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/__init__.py @@ -0,0 +1,224 @@ +"""Private counterpart of ``numpy.typing``.""" + +from __future__ import annotations + +from .. import ufunc +from .._utils import set_module +from typing import TYPE_CHECKING, final + + +@final # Disallow the creation of arbitrary `NBitBase` subclasses +@set_module("numpy.typing") +class NBitBase: + """ + A type representing `numpy.number` precision during static type checking. + + Used exclusively for the purpose static type checking, `NBitBase` + represents the base of a hierarchical set of subclasses. + Each subsequent subclass is herein used for representing a lower level + of precision, *e.g.* ``64Bit > 32Bit > 16Bit``. + + .. versionadded:: 1.20 + + Examples + -------- + Below is a typical usage example: `NBitBase` is herein used for annotating + a function that takes a float and integer of arbitrary precision + as arguments and returns a new float of whichever precision is largest + (*e.g.* ``np.float16 + np.int64 -> np.float64``). + + .. code-block:: python + + >>> from __future__ import annotations + >>> from typing import TypeVar, TYPE_CHECKING + >>> import numpy as np + >>> import numpy.typing as npt + + >>> T1 = TypeVar("T1", bound=npt.NBitBase) + >>> T2 = TypeVar("T2", bound=npt.NBitBase) + + >>> def add(a: np.floating[T1], b: np.integer[T2]) -> np.floating[T1 | T2]: + ... return a + b + + >>> a = np.float16() + >>> b = np.int64() + >>> out = add(a, b) + + >>> if TYPE_CHECKING: + ... reveal_locals() + ... # note: Revealed local types are: + ... # note: a: numpy.floating[numpy.typing._16Bit*] + ... # note: b: numpy.signedinteger[numpy.typing._64Bit*] + ... # note: out: numpy.floating[numpy.typing._64Bit*] + + """ + + def __init_subclass__(cls) -> None: + allowed_names = { + "NBitBase", "_256Bit", "_128Bit", "_96Bit", "_80Bit", + "_64Bit", "_32Bit", "_16Bit", "_8Bit", + } + if cls.__name__ not in allowed_names: + raise TypeError('cannot inherit from final class "NBitBase"') + super().__init_subclass__() + + +# Silence errors about subclassing a `@final`-decorated class +class _256Bit(NBitBase): # type: ignore[misc] + pass + +class _128Bit(_256Bit): # type: ignore[misc] + pass + +class _96Bit(_128Bit): # type: ignore[misc] + pass + +class _80Bit(_96Bit): # type: ignore[misc] + pass + +class _64Bit(_80Bit): # type: ignore[misc] + pass + +class _32Bit(_64Bit): # type: ignore[misc] + pass + +class _16Bit(_32Bit): # type: ignore[misc] + pass + +class _8Bit(_16Bit): # type: ignore[misc] + pass + + +from ._nested_sequence import ( + _NestedSequence as _NestedSequence, +) +from ._nbit import ( + _NBitByte as _NBitByte, + _NBitShort as _NBitShort, + _NBitIntC as _NBitIntC, + _NBitIntP as _NBitIntP, + _NBitInt as _NBitInt, + _NBitLong as _NBitLong, + _NBitLongLong as _NBitLongLong, + _NBitHalf as _NBitHalf, + _NBitSingle as _NBitSingle, + _NBitDouble as _NBitDouble, + _NBitLongDouble as _NBitLongDouble, +) +from ._char_codes import ( + _BoolCodes as _BoolCodes, + _UInt8Codes as _UInt8Codes, + _UInt16Codes as _UInt16Codes, + _UInt32Codes as _UInt32Codes, + _UInt64Codes as _UInt64Codes, + _Int8Codes as _Int8Codes, + _Int16Codes as _Int16Codes, + _Int32Codes as _Int32Codes, + _Int64Codes as _Int64Codes, + _Float16Codes as _Float16Codes, + _Float32Codes as _Float32Codes, + _Float64Codes as _Float64Codes, + _Complex64Codes as _Complex64Codes, + _Complex128Codes as _Complex128Codes, + _ByteCodes as _ByteCodes, + _ShortCodes as _ShortCodes, + _IntCCodes as _IntCCodes, + _IntPCodes as _IntPCodes, + _IntCodes as _IntCodes, + _LongCodes as _LongCodes, + _LongLongCodes as _LongLongCodes, + _UByteCodes as _UByteCodes, + _UShortCodes as _UShortCodes, + _UIntCCodes as _UIntCCodes, + _UIntPCodes as _UIntPCodes, + _UIntCodes as _UIntCodes, + _ULongCodes as _ULongCodes, + _ULongLongCodes as _ULongLongCodes, + _HalfCodes as _HalfCodes, + _SingleCodes as _SingleCodes, + _DoubleCodes as _DoubleCodes, + _LongDoubleCodes as _LongDoubleCodes, + _CSingleCodes as _CSingleCodes, + _CDoubleCodes as _CDoubleCodes, + _CLongDoubleCodes as _CLongDoubleCodes, + _DT64Codes as _DT64Codes, + _TD64Codes as _TD64Codes, + _StrCodes as _StrCodes, + _BytesCodes as _BytesCodes, + _VoidCodes as _VoidCodes, + _ObjectCodes as _ObjectCodes, +) +from ._scalars import ( + _CharLike_co as _CharLike_co, + _BoolLike_co as _BoolLike_co, + _UIntLike_co as _UIntLike_co, + _IntLike_co as _IntLike_co, + _FloatLike_co as _FloatLike_co, + _ComplexLike_co as _ComplexLike_co, + _TD64Like_co as _TD64Like_co, + _NumberLike_co as _NumberLike_co, + _ScalarLike_co as _ScalarLike_co, + _VoidLike_co as _VoidLike_co, +) +from ._shape import ( + _Shape as _Shape, + _ShapeLike as _ShapeLike, +) +from ._dtype_like import ( + DTypeLike as DTypeLike, + _DTypeLike as _DTypeLike, + _SupportsDType as _SupportsDType, + _VoidDTypeLike as _VoidDTypeLike, + _DTypeLikeBool as _DTypeLikeBool, + _DTypeLikeUInt as _DTypeLikeUInt, + _DTypeLikeInt as _DTypeLikeInt, + _DTypeLikeFloat as _DTypeLikeFloat, + _DTypeLikeComplex as _DTypeLikeComplex, + _DTypeLikeTD64 as _DTypeLikeTD64, + _DTypeLikeDT64 as _DTypeLikeDT64, + _DTypeLikeObject as _DTypeLikeObject, + _DTypeLikeVoid as _DTypeLikeVoid, + _DTypeLikeStr as _DTypeLikeStr, + _DTypeLikeBytes as _DTypeLikeBytes, + _DTypeLikeComplex_co as _DTypeLikeComplex_co, +) +from ._array_like import ( + NDArray as NDArray, + ArrayLike as ArrayLike, + _ArrayLike as _ArrayLike, + _FiniteNestedSequence as _FiniteNestedSequence, + _SupportsArray as _SupportsArray, + _SupportsArrayFunc as _SupportsArrayFunc, + _ArrayLikeInt as _ArrayLikeInt, + _ArrayLikeBool_co as _ArrayLikeBool_co, + _ArrayLikeUInt_co as _ArrayLikeUInt_co, + _ArrayLikeInt_co as _ArrayLikeInt_co, + _ArrayLikeFloat_co as _ArrayLikeFloat_co, + _ArrayLikeComplex_co as _ArrayLikeComplex_co, + _ArrayLikeNumber_co as _ArrayLikeNumber_co, + _ArrayLikeTD64_co as _ArrayLikeTD64_co, + _ArrayLikeDT64_co as _ArrayLikeDT64_co, + _ArrayLikeObject_co as _ArrayLikeObject_co, + _ArrayLikeVoid_co as _ArrayLikeVoid_co, + _ArrayLikeStr_co as _ArrayLikeStr_co, + _ArrayLikeBytes_co as _ArrayLikeBytes_co, + _ArrayLikeUnknown as _ArrayLikeUnknown, + _UnknownType as _UnknownType, +) + +if TYPE_CHECKING: + from ._ufunc import ( + _UFunc_Nin1_Nout1 as _UFunc_Nin1_Nout1, + _UFunc_Nin2_Nout1 as _UFunc_Nin2_Nout1, + _UFunc_Nin1_Nout2 as _UFunc_Nin1_Nout2, + _UFunc_Nin2_Nout2 as _UFunc_Nin2_Nout2, + _GUFunc_Nin2_Nout1 as _GUFunc_Nin2_Nout1, + ) +else: + # Declare the (type-check-only) ufunc subclasses as ufunc aliases during + # runtime; this helps autocompletion tools such as Jedi (numpy/numpy#19834) + _UFunc_Nin1_Nout1 = ufunc + _UFunc_Nin2_Nout1 = ufunc + _UFunc_Nin1_Nout2 = ufunc + 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+ +_docstrings_list = [] + + +def add_newdoc(name: str, value: str, doc: str) -> None: + """Append ``_docstrings_list`` with a docstring for `name`. + + Parameters + ---------- + name : str + The name of the object. + value : str + A string-representation of the object. + doc : str + The docstring of the object. + + """ + _docstrings_list.append((name, value, doc)) + + +def _parse_docstrings() -> str: + """Convert all docstrings in ``_docstrings_list`` into a single + sphinx-legible text block. + + """ + type_list_ret = [] + for name, value, doc in _docstrings_list: + s = textwrap.dedent(doc).replace("\n", "\n ") + + # Replace sections by rubrics + lines = s.split("\n") + new_lines = [] + indent = "" + for line in lines: + m = re.match(r'^(\s+)[-=]+\s*$', line) + if m and new_lines: + prev = textwrap.dedent(new_lines.pop()) + if prev == "Examples": + indent = "" + new_lines.append(f'{m.group(1)}.. rubric:: {prev}') + else: + indent = 4 * " " + new_lines.append(f'{m.group(1)}.. admonition:: {prev}') + new_lines.append("") + else: + new_lines.append(f"{indent}{line}") + + s = "\n".join(new_lines) + s_block = f""".. data:: {name}\n :value: {value}\n {s}""" + type_list_ret.append(s_block) + return "\n".join(type_list_ret) + + +add_newdoc('ArrayLike', 'typing.Union[...]', + """ + A `~typing.Union` representing objects that can be coerced + into an `~numpy.ndarray`. + + Among others this includes the likes of: + + * Scalars. + * (Nested) sequences. + * Objects implementing the `~class.__array__` protocol. + + .. versionadded:: 1.20 + + See Also + -------- + :term:`array_like`: + Any scalar or sequence that can be interpreted as an ndarray. + + Examples + -------- + .. code-block:: python + + >>> import numpy as np + >>> import numpy.typing as npt + + >>> def as_array(a: npt.ArrayLike) -> np.ndarray: + ... return np.array(a) + + """) + +add_newdoc('DTypeLike', 'typing.Union[...]', + """ + A `~typing.Union` representing objects that can be coerced + into a `~numpy.dtype`. + + Among others this includes the likes of: + + * :class:`type` objects. + * Character codes or the names of :class:`type` objects. + * Objects with the ``.dtype`` attribute. + + .. versionadded:: 1.20 + + See Also + -------- + :ref:`Specifying and constructing data types ` + A comprehensive overview of all objects that can be coerced + into data types. + + Examples + -------- + .. code-block:: python + + >>> import numpy as np + >>> import numpy.typing as npt + + >>> def as_dtype(d: npt.DTypeLike) -> np.dtype: + ... return np.dtype(d) + + """) + +add_newdoc('NDArray', repr(NDArray), + """ + A `np.ndarray[Any, np.dtype[+ScalarType]] ` type alias + :term:`generic ` w.r.t. its `dtype.type `. + + Can be used during runtime for typing arrays with a given dtype + and unspecified shape. + + .. versionadded:: 1.21 + + Examples + -------- + .. code-block:: python + + >>> import numpy as np + >>> import numpy.typing as npt + + >>> print(npt.NDArray) + numpy.ndarray[typing.Any, numpy.dtype[+ScalarType]] + + >>> print(npt.NDArray[np.float64]) + numpy.ndarray[typing.Any, numpy.dtype[numpy.float64]] + + >>> NDArrayInt = npt.NDArray[np.int_] + >>> a: NDArrayInt = np.arange(10) + + >>> def func(a: npt.ArrayLike) -> npt.NDArray[Any]: + ... return np.array(a) + + """) + +_docstrings = _parse_docstrings() diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_array_like.py b/venv/lib/python3.12/site-packages/numpy/_typing/_array_like.py new file mode 100644 index 0000000000000000000000000000000000000000..33255693806e44b0f0646cf29cffcccd19a4fe84 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_array_like.py @@ -0,0 +1,167 @@ +from __future__ import annotations + +import sys +from collections.abc import Collection, Callable, Sequence +from typing import Any, Protocol, Union, TypeVar, runtime_checkable + +import numpy as np +from numpy import ( + ndarray, + dtype, + generic, + unsignedinteger, + integer, + floating, + complexfloating, + number, + timedelta64, + datetime64, + object_, + void, + str_, + bytes_, +) +from ._nested_sequence import _NestedSequence + +_T = TypeVar("_T") +_ScalarType = TypeVar("_ScalarType", bound=generic) +_ScalarType_co = TypeVar("_ScalarType_co", bound=generic, covariant=True) +_DType = TypeVar("_DType", bound=dtype[Any]) +_DType_co = TypeVar("_DType_co", covariant=True, bound=dtype[Any]) + +NDArray = ndarray[Any, dtype[_ScalarType_co]] + +# The `_SupportsArray` protocol only cares about the default dtype +# (i.e. `dtype=None` or no `dtype` parameter at all) of the to-be returned +# array. +# Concrete implementations of the protocol are responsible for adding +# any and all remaining overloads +@runtime_checkable +class _SupportsArray(Protocol[_DType_co]): + def __array__(self) -> ndarray[Any, _DType_co]: ... + + +@runtime_checkable +class _SupportsArrayFunc(Protocol): + """A protocol class representing `~class.__array_function__`.""" + def __array_function__( + self, + func: Callable[..., Any], + types: Collection[type[Any]], + args: tuple[Any, ...], + kwargs: dict[str, Any], + ) -> object: ... + + +# TODO: Wait until mypy supports recursive objects in combination with typevars +_FiniteNestedSequence = Union[ + _T, + Sequence[_T], + Sequence[Sequence[_T]], + Sequence[Sequence[Sequence[_T]]], + Sequence[Sequence[Sequence[Sequence[_T]]]], +] + +# A subset of `npt.ArrayLike` that can be parametrized w.r.t. `np.generic` +_ArrayLike = Union[ + _SupportsArray[dtype[_ScalarType]], + _NestedSequence[_SupportsArray[dtype[_ScalarType]]], +] + +# A union representing array-like objects; consists of two typevars: +# One representing types that can be parametrized w.r.t. `np.dtype` +# and another one for the rest +_DualArrayLike = Union[ + _SupportsArray[_DType], + _NestedSequence[_SupportsArray[_DType]], + _T, + _NestedSequence[_T], +] + +if sys.version_info >= (3, 12): + from collections.abc import Buffer + + ArrayLike = Buffer | _DualArrayLike[ + dtype[Any], + Union[bool, int, float, complex, str, bytes], + ] +else: + ArrayLike = _DualArrayLike[ + dtype[Any], + Union[bool, int, float, complex, str, bytes], + ] + +# `ArrayLike_co`: array-like objects that can be coerced into `X` +# given the casting rules `same_kind` +_ArrayLikeBool_co = _DualArrayLike[ + dtype[np.bool], + bool, +] +_ArrayLikeUInt_co = _DualArrayLike[ + dtype[Union[np.bool, unsignedinteger[Any]]], + bool, +] +_ArrayLikeInt_co = _DualArrayLike[ + dtype[Union[np.bool, integer[Any]]], + Union[bool, int], +] +_ArrayLikeFloat_co = _DualArrayLike[ + dtype[Union[np.bool, integer[Any], floating[Any]]], + Union[bool, int, float], +] +_ArrayLikeComplex_co = _DualArrayLike[ + dtype[Union[ + np.bool, + integer[Any], + floating[Any], + complexfloating[Any, Any], + ]], + Union[bool, int, float, complex], +] +_ArrayLikeNumber_co = _DualArrayLike[ + dtype[Union[np.bool, number[Any]]], + Union[bool, int, float, complex], +] +_ArrayLikeTD64_co = _DualArrayLike[ + dtype[Union[np.bool, integer[Any], timedelta64]], + Union[bool, int], +] +_ArrayLikeDT64_co = Union[ + _SupportsArray[dtype[datetime64]], + _NestedSequence[_SupportsArray[dtype[datetime64]]], +] +_ArrayLikeObject_co = Union[ + _SupportsArray[dtype[object_]], + _NestedSequence[_SupportsArray[dtype[object_]]], +] + +_ArrayLikeVoid_co = Union[ + _SupportsArray[dtype[void]], + _NestedSequence[_SupportsArray[dtype[void]]], +] +_ArrayLikeStr_co = _DualArrayLike[ + dtype[str_], + str, +] +_ArrayLikeBytes_co = _DualArrayLike[ + dtype[bytes_], + bytes, +] + +_ArrayLikeInt = _DualArrayLike[ + dtype[integer[Any]], + int, +] + +# Extra ArrayLike type so that pyright can deal with NDArray[Any] +# Used as the first overload, should only match NDArray[Any], +# not any actual types. +# https://github.com/numpy/numpy/pull/22193 +class _UnknownType: + ... + + +_ArrayLikeUnknown = _DualArrayLike[ + dtype[_UnknownType], + _UnknownType, +] diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_callable.pyi b/venv/lib/python3.12/site-packages/numpy/_typing/_callable.pyi new file mode 100644 index 0000000000000000000000000000000000000000..843a0d07c2fba39c52866547089928d64bff31c1 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_callable.pyi @@ -0,0 +1,336 @@ +""" +A module with various ``typing.Protocol`` subclasses that implement +the ``__call__`` magic method. + +See the `Mypy documentation`_ on protocols for more details. + +.. _`Mypy documentation`: https://mypy.readthedocs.io/en/stable/protocols.html#callback-protocols + +""" + +from __future__ import annotations + +from typing import ( + TypeVar, + overload, + Any, + NoReturn, + Protocol, +) + +import numpy as np +from numpy import ( + generic, + timedelta64, + number, + integer, + unsignedinteger, + signedinteger, + int8, + int_, + floating, + float64, + complexfloating, + complex128, +) +from ._nbit import _NBitInt, _NBitDouble +from ._scalars import ( + _BoolLike_co, + _IntLike_co, + _FloatLike_co, + _NumberLike_co, +) +from . import NBitBase +from ._array_like import NDArray +from ._nested_sequence import _NestedSequence + +_T1 = TypeVar("_T1") +_T2 = TypeVar("_T2") +_T1_contra = TypeVar("_T1_contra", contravariant=True) +_T2_contra = TypeVar("_T2_contra", contravariant=True) +_2Tuple = tuple[_T1, _T1] + +_NBit1 = TypeVar("_NBit1", bound=NBitBase) +_NBit2 = TypeVar("_NBit2", bound=NBitBase) + +_IntType = TypeVar("_IntType", bound=integer) +_FloatType = TypeVar("_FloatType", bound=floating) +_NumberType = TypeVar("_NumberType", bound=number) +_NumberType_co = TypeVar("_NumberType_co", covariant=True, bound=number) +_GenericType_co = TypeVar("_GenericType_co", covariant=True, bound=generic) + +class _BoolOp(Protocol[_GenericType_co]): + @overload + def __call__(self, other: _BoolLike_co, /) -> _GenericType_co: ... + @overload # platform dependent + def __call__(self, other: int, /) -> int_: ... + @overload + def __call__(self, other: float, /) -> float64: ... + @overload + def __call__(self, other: complex, /) -> complex128: ... + @overload + def __call__(self, other: _NumberType, /) -> _NumberType: ... + +class _BoolBitOp(Protocol[_GenericType_co]): + @overload + def __call__(self, other: _BoolLike_co, /) -> _GenericType_co: ... + @overload # platform dependent + def __call__(self, other: int, /) -> int_: ... + @overload + def __call__(self, other: _IntType, /) -> _IntType: ... + +class _BoolSub(Protocol): + # Note that `other: bool` is absent here + @overload + def __call__(self, other: bool, /) -> NoReturn: ... + @overload # platform dependent + def __call__(self, other: int, /) -> int_: ... + @overload + def __call__(self, other: float, /) -> float64: ... + @overload + def __call__(self, other: complex, /) -> complex128: ... + @overload + def __call__(self, other: _NumberType, /) -> _NumberType: ... + +class _BoolTrueDiv(Protocol): + @overload + def __call__(self, other: float | _IntLike_co, /) -> float64: ... + @overload + def __call__(self, other: complex, /) -> complex128: ... + @overload + def __call__(self, other: _NumberType, /) -> _NumberType: ... + +class _BoolMod(Protocol): + @overload + def __call__(self, other: _BoolLike_co, /) -> int8: ... + @overload # platform dependent + def __call__(self, other: int, /) -> int_: ... + @overload + def __call__(self, other: float, /) -> float64: ... + @overload + def __call__(self, other: _IntType, /) -> _IntType: ... + @overload + def __call__(self, other: _FloatType, /) -> _FloatType: ... + +class _BoolDivMod(Protocol): + @overload + def __call__(self, other: _BoolLike_co, /) -> _2Tuple[int8]: ... + @overload # platform dependent + def __call__(self, other: int, /) -> _2Tuple[int_]: ... + @overload + def __call__(self, other: float, /) -> _2Tuple[floating[_NBit1 | _NBitDouble]]: ... + @overload + def __call__(self, other: _IntType, /) -> _2Tuple[_IntType]: ... + @overload + def __call__(self, other: _FloatType, /) -> _2Tuple[_FloatType]: ... + +class _TD64Div(Protocol[_NumberType_co]): + @overload + def __call__(self, other: timedelta64, /) -> _NumberType_co: ... + @overload + def __call__(self, other: _BoolLike_co, /) -> NoReturn: ... + @overload + def __call__(self, other: _FloatLike_co, /) -> timedelta64: ... + +class _IntTrueDiv(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> floating[_NBit1]: ... + @overload + def __call__(self, other: int, /) -> floating[_NBit1 | _NBitInt]: ... + @overload + def __call__(self, other: float, /) -> floating[_NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: complex, /, + ) -> complexfloating[_NBit1 | _NBitDouble, _NBit1 | _NBitDouble]: ... + @overload + def __call__(self, other: integer[_NBit2], /) -> floating[_NBit1 | _NBit2]: ... + +class _UnsignedIntOp(Protocol[_NBit1]): + # NOTE: `uint64 + signedinteger -> float64` + @overload + def __call__(self, other: bool, /) -> unsignedinteger[_NBit1]: ... + @overload + def __call__( + self, other: int | signedinteger[Any], / + ) -> Any: ... + @overload + def __call__(self, other: float, /) -> floating[_NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: complex, /, + ) -> complexfloating[_NBit1 | _NBitDouble, _NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: unsignedinteger[_NBit2], / + ) -> unsignedinteger[_NBit1 | _NBit2]: ... + +class _UnsignedIntBitOp(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> unsignedinteger[_NBit1]: ... + @overload + def __call__(self, other: int, /) -> signedinteger[Any]: ... + @overload + def __call__(self, other: signedinteger[Any], /) -> signedinteger[Any]: ... + @overload + def __call__( + self, other: unsignedinteger[_NBit2], / + ) -> unsignedinteger[_NBit1 | _NBit2]: ... + +class _UnsignedIntMod(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> unsignedinteger[_NBit1]: ... + @overload + def __call__( + self, other: int | signedinteger[Any], / + ) -> Any: ... + @overload + def __call__(self, other: float, /) -> floating[_NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: unsignedinteger[_NBit2], / + ) -> unsignedinteger[_NBit1 | _NBit2]: ... + +class _UnsignedIntDivMod(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> _2Tuple[signedinteger[_NBit1]]: ... + @overload + def __call__( + self, other: int | signedinteger[Any], / + ) -> _2Tuple[Any]: ... + @overload + def __call__(self, other: float, /) -> _2Tuple[floating[_NBit1 | _NBitDouble]]: ... + @overload + def __call__( + self, other: unsignedinteger[_NBit2], / + ) -> _2Tuple[unsignedinteger[_NBit1 | _NBit2]]: ... + +class _SignedIntOp(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> signedinteger[_NBit1]: ... + @overload + def __call__(self, other: int, /) -> signedinteger[_NBit1 | _NBitInt]: ... + @overload + def __call__(self, other: float, /) -> floating[_NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: complex, /, + ) -> complexfloating[_NBit1 | _NBitDouble, _NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: signedinteger[_NBit2], /, + ) -> signedinteger[_NBit1 | _NBit2]: ... + +class _SignedIntBitOp(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> signedinteger[_NBit1]: ... + @overload + def __call__(self, other: int, /) -> signedinteger[_NBit1 | _NBitInt]: ... + @overload + def __call__( + self, other: signedinteger[_NBit2], /, + ) -> signedinteger[_NBit1 | _NBit2]: ... + +class _SignedIntMod(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> signedinteger[_NBit1]: ... + @overload + def __call__(self, other: int, /) -> signedinteger[_NBit1 | _NBitInt]: ... + @overload + def __call__(self, other: float, /) -> floating[_NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: signedinteger[_NBit2], /, + ) -> signedinteger[_NBit1 | _NBit2]: ... + +class _SignedIntDivMod(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> _2Tuple[signedinteger[_NBit1]]: ... + @overload + def __call__(self, other: int, /) -> _2Tuple[signedinteger[_NBit1 | _NBitInt]]: ... + @overload + def __call__(self, other: float, /) -> _2Tuple[floating[_NBit1 | _NBitDouble]]: ... + @overload + def __call__( + self, other: signedinteger[_NBit2], /, + ) -> _2Tuple[signedinteger[_NBit1 | _NBit2]]: ... + +class _FloatOp(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> floating[_NBit1]: ... + @overload + def __call__(self, other: int, /) -> floating[_NBit1 | _NBitInt]: ... + @overload + def __call__(self, other: float, /) -> floating[_NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: complex, /, + ) -> complexfloating[_NBit1 | _NBitDouble, _NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: integer[_NBit2] | floating[_NBit2], / + ) -> floating[_NBit1 | _NBit2]: ... + +class _FloatMod(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> floating[_NBit1]: ... + @overload + def __call__(self, other: int, /) -> floating[_NBit1 | _NBitInt]: ... + @overload + def __call__(self, other: float, /) -> floating[_NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, other: integer[_NBit2] | floating[_NBit2], / + ) -> floating[_NBit1 | _NBit2]: ... + +class _FloatDivMod(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> _2Tuple[floating[_NBit1]]: ... + @overload + def __call__(self, other: int, /) -> _2Tuple[floating[_NBit1 | _NBitInt]]: ... + @overload + def __call__(self, other: float, /) -> _2Tuple[floating[_NBit1 | _NBitDouble]]: ... + @overload + def __call__( + self, other: integer[_NBit2] | floating[_NBit2], / + ) -> _2Tuple[floating[_NBit1 | _NBit2]]: ... + +class _ComplexOp(Protocol[_NBit1]): + @overload + def __call__(self, other: bool, /) -> complexfloating[_NBit1, _NBit1]: ... + @overload + def __call__(self, other: int, /) -> complexfloating[_NBit1 | _NBitInt, _NBit1 | _NBitInt]: ... + @overload + def __call__( + self, other: complex, /, + ) -> complexfloating[_NBit1 | _NBitDouble, _NBit1 | _NBitDouble]: ... + @overload + def __call__( + self, + other: ( + integer[_NBit2] + | floating[_NBit2] + | complexfloating[_NBit2, _NBit2] + ), /, + ) -> complexfloating[_NBit1 | _NBit2, _NBit1 | _NBit2]: ... + +class _NumberOp(Protocol): + def __call__(self, other: _NumberLike_co, /) -> Any: ... + +class _SupportsLT(Protocol): + def __lt__(self, other: Any, /) -> object: ... + +class _SupportsGT(Protocol): + def __gt__(self, other: Any, /) -> object: ... + +class _ComparisonOp(Protocol[_T1_contra, _T2_contra]): + @overload + def __call__(self, other: _T1_contra, /) -> np.bool: ... + @overload + def __call__(self, other: _T2_contra, /) -> NDArray[np.bool]: ... + @overload + def __call__( + self, + other: _SupportsLT | _SupportsGT | _NestedSequence[_SupportsLT | _SupportsGT], + /, + ) -> Any: ... diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_char_codes.py b/venv/lib/python3.12/site-packages/numpy/_typing/_char_codes.py new file mode 100644 index 0000000000000000000000000000000000000000..e5c4fa5d1bd27b63e84a2c80be42467434b1247c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_char_codes.py @@ -0,0 +1,113 @@ +from typing import Literal + +_BoolCodes = Literal["?", "=?", "?", "bool", "bool_"] + +_UInt8Codes = Literal["uint8", "u1", "=u1", "u1"] +_UInt16Codes = Literal["uint16", "u2", "=u2", "u2"] +_UInt32Codes = Literal["uint32", "u4", "=u4", "u4"] +_UInt64Codes = Literal["uint64", "u8", "=u8", "u8"] + +_Int8Codes = Literal["int8", "i1", "=i1", "i1"] +_Int16Codes = Literal["int16", "i2", "=i2", "i2"] +_Int32Codes = Literal["int32", "i4", "=i4", "i4"] +_Int64Codes = Literal["int64", "i8", "=i8", "i8"] + +_Float16Codes = Literal["float16", "f2", "=f2", "f2"] +_Float32Codes = Literal["float32", "f4", "=f4", "f4"] +_Float64Codes = Literal["float64", "f8", "=f8", "f8"] + +_Complex64Codes = Literal["complex64", "c8", "=c8", "c8"] +_Complex128Codes = Literal["complex128", "c16", "=c16", "c16"] + +_ByteCodes = Literal["byte", "b", "=b", "b"] +_ShortCodes = Literal["short", "h", "=h", "h"] +_IntCCodes = Literal["intc", "i", "=i", "i"] +_IntPCodes = Literal["intp", "int", "int_", "n", "=n", "n"] +_LongCodes = Literal["long", "l", "=l", "l"] +_IntCodes = _IntPCodes +_LongLongCodes = Literal["longlong", "q", "=q", "q"] + +_UByteCodes = Literal["ubyte", "B", "=B", "B"] +_UShortCodes = Literal["ushort", "H", "=H", "H"] +_UIntCCodes = Literal["uintc", "I", "=I", "I"] +_UIntPCodes = Literal["uintp", "uint", "N", "=N", "N"] +_ULongCodes = Literal["ulong", "L", "=L", "L"] +_UIntCodes = _UIntPCodes +_ULongLongCodes = Literal["ulonglong", "Q", "=Q", "Q"] + +_HalfCodes = Literal["half", "e", "=e", "e"] +_SingleCodes = Literal["single", "f", "=f", "f"] +_DoubleCodes = Literal["double", "float", "d", "=d", "d"] +_LongDoubleCodes = Literal["longdouble", "g", "=g", "g"] + +_CSingleCodes = Literal["csingle", "F", "=F", "F"] +_CDoubleCodes = Literal["cdouble", "complex", "D", "=D", "D"] +_CLongDoubleCodes = Literal["clongdouble", "G", "=G", "G"] + +_StrCodes = Literal["str", "str_", "unicode", "U", "=U", "U"] +_BytesCodes = Literal["bytes", "bytes_", "S", "=S", "S"] +_VoidCodes = Literal["void", "V", "=V", "V"] +_ObjectCodes = Literal["object", "object_", "O", "=O", "O"] + +_DT64Codes = Literal[ + "datetime64", "=datetime64", "datetime64", + "datetime64[Y]", "=datetime64[Y]", "datetime64[Y]", + "datetime64[M]", "=datetime64[M]", "datetime64[M]", + "datetime64[W]", "=datetime64[W]", "datetime64[W]", + "datetime64[D]", "=datetime64[D]", "datetime64[D]", + "datetime64[h]", "=datetime64[h]", "datetime64[h]", + "datetime64[m]", "=datetime64[m]", "datetime64[m]", + "datetime64[s]", "=datetime64[s]", "datetime64[s]", + "datetime64[ms]", "=datetime64[ms]", "datetime64[ms]", + "datetime64[us]", "=datetime64[us]", "datetime64[us]", + "datetime64[ns]", "=datetime64[ns]", "datetime64[ns]", + "datetime64[ps]", "=datetime64[ps]", "datetime64[ps]", + "datetime64[fs]", "=datetime64[fs]", "datetime64[fs]", + "datetime64[as]", "=datetime64[as]", "datetime64[as]", + "M", "=M", "M", + "M8", "=M8", "M8", + "M8[Y]", "=M8[Y]", "M8[Y]", + "M8[M]", "=M8[M]", "M8[M]", + "M8[W]", "=M8[W]", "M8[W]", + "M8[D]", "=M8[D]", "M8[D]", + "M8[h]", "=M8[h]", "M8[h]", + "M8[m]", "=M8[m]", "M8[m]", + "M8[s]", "=M8[s]", "M8[s]", + "M8[ms]", "=M8[ms]", "M8[ms]", + "M8[us]", "=M8[us]", "M8[us]", + "M8[ns]", "=M8[ns]", "M8[ns]", + "M8[ps]", "=M8[ps]", "M8[ps]", + "M8[fs]", "=M8[fs]", "M8[fs]", + "M8[as]", "=M8[as]", "M8[as]", +] +_TD64Codes = Literal[ + "timedelta64", "=timedelta64", "timedelta64", + "timedelta64[Y]", "=timedelta64[Y]", "timedelta64[Y]", + "timedelta64[M]", "=timedelta64[M]", "timedelta64[M]", + "timedelta64[W]", "=timedelta64[W]", "timedelta64[W]", + "timedelta64[D]", "=timedelta64[D]", "timedelta64[D]", + "timedelta64[h]", "=timedelta64[h]", "timedelta64[h]", + "timedelta64[m]", "=timedelta64[m]", "timedelta64[m]", + "timedelta64[s]", "=timedelta64[s]", "timedelta64[s]", + "timedelta64[ms]", "=timedelta64[ms]", "timedelta64[ms]", + "timedelta64[us]", "=timedelta64[us]", "timedelta64[us]", + "timedelta64[ns]", "=timedelta64[ns]", "timedelta64[ns]", + "timedelta64[ps]", "=timedelta64[ps]", "timedelta64[ps]", + "timedelta64[fs]", "=timedelta64[fs]", "timedelta64[fs]", + "timedelta64[as]", "=timedelta64[as]", "timedelta64[as]", + "m", "=m", "m", + "m8", "=m8", "m8", + "m8[Y]", "=m8[Y]", "m8[Y]", + "m8[M]", "=m8[M]", "m8[M]", + "m8[W]", "=m8[W]", "m8[W]", + "m8[D]", "=m8[D]", "m8[D]", + "m8[h]", "=m8[h]", "m8[h]", + "m8[m]", "=m8[m]", "m8[m]", + "m8[s]", "=m8[s]", "m8[s]", + "m8[ms]", "=m8[ms]", "m8[ms]", + "m8[us]", "=m8[us]", "m8[us]", + "m8[ns]", "=m8[ns]", "m8[ns]", + "m8[ps]", "=m8[ps]", "m8[ps]", + "m8[fs]", "=m8[fs]", "m8[fs]", + "m8[as]", "=m8[as]", "m8[as]", +] diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_dtype_like.py b/venv/lib/python3.12/site-packages/numpy/_typing/_dtype_like.py new file mode 100644 index 0000000000000000000000000000000000000000..73a5f7d7b5a765c054bf4f4bdad75c3b7e67a586 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_dtype_like.py @@ -0,0 +1,250 @@ +from collections.abc import Sequence +from typing import ( + Any, + Sequence, + Union, + TypeVar, + Protocol, + TypedDict, + runtime_checkable, +) + +import numpy as np + +from ._shape import _ShapeLike + +from ._char_codes import ( + _BoolCodes, + _UInt8Codes, + _UInt16Codes, + _UInt32Codes, + _UInt64Codes, + _Int8Codes, + _Int16Codes, + _Int32Codes, + _Int64Codes, + _Float16Codes, + _Float32Codes, + _Float64Codes, + _Complex64Codes, + _Complex128Codes, + _ByteCodes, + _ShortCodes, + _IntCCodes, + _LongCodes, + _LongLongCodes, + _IntPCodes, + _IntCodes, + _UByteCodes, + _UShortCodes, + _UIntCCodes, + _ULongCodes, + _ULongLongCodes, + _UIntPCodes, + _UIntCodes, + _HalfCodes, + _SingleCodes, + _DoubleCodes, + _LongDoubleCodes, + _CSingleCodes, + _CDoubleCodes, + _CLongDoubleCodes, + _DT64Codes, + _TD64Codes, + _StrCodes, + _BytesCodes, + _VoidCodes, + _ObjectCodes, +) + +_SCT = TypeVar("_SCT", bound=np.generic) +_DType_co = TypeVar("_DType_co", covariant=True, bound=np.dtype[Any]) + +_DTypeLikeNested = Any # TODO: wait for support for recursive types + + +# Mandatory keys +class _DTypeDictBase(TypedDict): + names: Sequence[str] + formats: Sequence[_DTypeLikeNested] + + +# Mandatory + optional keys +class _DTypeDict(_DTypeDictBase, total=False): + # Only `str` elements are usable as indexing aliases, + # but `titles` can in principle accept any object + offsets: Sequence[int] + titles: Sequence[Any] + itemsize: int + aligned: bool + + +# A protocol for anything with the dtype attribute +@runtime_checkable +class _SupportsDType(Protocol[_DType_co]): + @property + def dtype(self) -> _DType_co: ... + + +# A subset of `npt.DTypeLike` that can be parametrized w.r.t. `np.generic` +_DTypeLike = Union[ + np.dtype[_SCT], + type[_SCT], + _SupportsDType[np.dtype[_SCT]], +] + + +# Would create a dtype[np.void] +_VoidDTypeLike = Union[ + # (flexible_dtype, itemsize) + tuple[_DTypeLikeNested, int], + # (fixed_dtype, shape) + tuple[_DTypeLikeNested, _ShapeLike], + # [(field_name, field_dtype, field_shape), ...] + # + # The type here is quite broad because NumPy accepts quite a wide + # range of inputs inside the list; see the tests for some + # examples. + list[Any], + # {'names': ..., 'formats': ..., 'offsets': ..., 'titles': ..., + # 'itemsize': ...} + _DTypeDict, + # (base_dtype, new_dtype) + tuple[_DTypeLikeNested, _DTypeLikeNested], +] + +# Anything that can be coerced into numpy.dtype. +# Reference: https://docs.scipy.org/doc/numpy/reference/arrays.dtypes.html +DTypeLike = Union[ + np.dtype[Any], + # default data type (float64) + None, + # array-scalar types and generic types + type[Any], # NOTE: We're stuck with `type[Any]` due to object dtypes + # anything with a dtype attribute + _SupportsDType[np.dtype[Any]], + # character codes, type strings or comma-separated fields, e.g., 'float64' + str, + _VoidDTypeLike, +] + +# NOTE: while it is possible to provide the dtype as a dict of +# dtype-like objects (e.g. `{'field1': ..., 'field2': ..., ...}`), +# this syntax is officially discourged and +# therefore not included in the Union defining `DTypeLike`. +# +# See https://github.com/numpy/numpy/issues/16891 for more details. + +# Aliases for commonly used dtype-like objects. +# Note that the precision of `np.number` subclasses is ignored herein. +_DTypeLikeBool = Union[ + type[bool], + type[np.bool], + np.dtype[np.bool], + _SupportsDType[np.dtype[np.bool]], + _BoolCodes, +] +_DTypeLikeUInt = Union[ + type[np.unsignedinteger], + np.dtype[np.unsignedinteger], + _SupportsDType[np.dtype[np.unsignedinteger]], + _UInt8Codes, + _UInt16Codes, + _UInt32Codes, + _UInt64Codes, + _UByteCodes, + _UShortCodes, + _UIntCCodes, + _LongCodes, + _ULongLongCodes, + _UIntPCodes, + _UIntCodes, +] +_DTypeLikeInt = Union[ + type[int], + type[np.signedinteger], + np.dtype[np.signedinteger], + _SupportsDType[np.dtype[np.signedinteger]], + _Int8Codes, + _Int16Codes, + _Int32Codes, + _Int64Codes, + _ByteCodes, + _ShortCodes, + _IntCCodes, + _LongCodes, + _LongLongCodes, + _IntPCodes, + _IntCodes, +] +_DTypeLikeFloat = Union[ + type[float], + type[np.floating], + np.dtype[np.floating], + _SupportsDType[np.dtype[np.floating]], + _Float16Codes, + _Float32Codes, + _Float64Codes, + _HalfCodes, + _SingleCodes, + _DoubleCodes, + _LongDoubleCodes, +] +_DTypeLikeComplex = Union[ + type[complex], + type[np.complexfloating], + np.dtype[np.complexfloating], + _SupportsDType[np.dtype[np.complexfloating]], + _Complex64Codes, + _Complex128Codes, + _CSingleCodes, + _CDoubleCodes, + _CLongDoubleCodes, +] +_DTypeLikeDT64 = Union[ + type[np.timedelta64], + np.dtype[np.timedelta64], + _SupportsDType[np.dtype[np.timedelta64]], + _TD64Codes, +] +_DTypeLikeTD64 = Union[ + type[np.datetime64], + np.dtype[np.datetime64], + _SupportsDType[np.dtype[np.datetime64]], + _DT64Codes, +] +_DTypeLikeStr = Union[ + type[str], + type[np.str_], + np.dtype[np.str_], + _SupportsDType[np.dtype[np.str_]], + _StrCodes, +] +_DTypeLikeBytes = Union[ + type[bytes], + type[np.bytes_], + np.dtype[np.bytes_], + _SupportsDType[np.dtype[np.bytes_]], + _BytesCodes, +] +_DTypeLikeVoid = Union[ + type[np.void], + np.dtype[np.void], + _SupportsDType[np.dtype[np.void]], + _VoidCodes, + _VoidDTypeLike, +] +_DTypeLikeObject = Union[ + type, + np.dtype[np.object_], + _SupportsDType[np.dtype[np.object_]], + _ObjectCodes, +] + +_DTypeLikeComplex_co = Union[ + _DTypeLikeBool, + _DTypeLikeUInt, + _DTypeLikeInt, + _DTypeLikeFloat, + _DTypeLikeComplex, +] diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_extended_precision.py b/venv/lib/python3.12/site-packages/numpy/_typing/_extended_precision.py new file mode 100644 index 0000000000000000000000000000000000000000..7246b47d0ee1724f5697ec3e80965f6f5ec48330 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_extended_precision.py @@ -0,0 +1,27 @@ +"""A module with platform-specific extended precision +`numpy.number` subclasses. + +The subclasses are defined here (instead of ``__init__.pyi``) such +that they can be imported conditionally via the numpy's mypy plugin. +""" + +import numpy as np +from . import ( + _80Bit, + _96Bit, + _128Bit, + _256Bit, +) + +uint128 = np.unsignedinteger[_128Bit] +uint256 = np.unsignedinteger[_256Bit] +int128 = np.signedinteger[_128Bit] +int256 = np.signedinteger[_256Bit] +float80 = np.floating[_80Bit] +float96 = np.floating[_96Bit] +float128 = np.floating[_128Bit] +float256 = np.floating[_256Bit] +complex160 = np.complexfloating[_80Bit, _80Bit] +complex192 = np.complexfloating[_96Bit, _96Bit] +complex256 = np.complexfloating[_128Bit, _128Bit] +complex512 = np.complexfloating[_256Bit, _256Bit] diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_nbit.py b/venv/lib/python3.12/site-packages/numpy/_typing/_nbit.py new file mode 100644 index 0000000000000000000000000000000000000000..7a4ca8837a2c61198d7615fd2e45df1da9f5e475 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_nbit.py @@ -0,0 +1,17 @@ +"""A module with the precisions of platform-specific `~numpy.number`s.""" + +from typing import Any + +# To-be replaced with a `npt.NBitBase` subclass by numpy's mypy plugin +_NBitByte = Any +_NBitShort = Any +_NBitIntC = Any +_NBitIntP = Any +_NBitInt = Any +_NBitLong = Any +_NBitLongLong = Any + +_NBitHalf = Any +_NBitSingle = Any +_NBitDouble = Any +_NBitLongDouble = Any diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_nested_sequence.py b/venv/lib/python3.12/site-packages/numpy/_typing/_nested_sequence.py new file mode 100644 index 0000000000000000000000000000000000000000..3d0d25ae5b48a7c4375364c110f05af4dd38a5eb --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_nested_sequence.py @@ -0,0 +1,86 @@ +"""A module containing the `_NestedSequence` protocol.""" + +from __future__ import annotations + +from collections.abc import Iterator +from typing import ( + Any, + TypeVar, + Protocol, + runtime_checkable, +) + +__all__ = ["_NestedSequence"] + +_T_co = TypeVar("_T_co", covariant=True) + + +@runtime_checkable +class _NestedSequence(Protocol[_T_co]): + """A protocol for representing nested sequences. + + Warning + ------- + `_NestedSequence` currently does not work in combination with typevars, + *e.g.* ``def func(a: _NestedSequnce[T]) -> T: ...``. + + See Also + -------- + collections.abc.Sequence + ABCs for read-only and mutable :term:`sequences`. + + Examples + -------- + .. code-block:: python + + >>> from __future__ import annotations + + >>> from typing import TYPE_CHECKING + >>> import numpy as np + >>> from numpy._typing import _NestedSequence + + >>> def get_dtype(seq: _NestedSequence[float]) -> np.dtype[np.float64]: + ... return np.asarray(seq).dtype + + >>> a = get_dtype([1.0]) + >>> b = get_dtype([[1.0]]) + >>> c = get_dtype([[[1.0]]]) + >>> d = get_dtype([[[[1.0]]]]) + + >>> if TYPE_CHECKING: + ... reveal_locals() + ... # note: Revealed local types are: + ... # note: a: numpy.dtype[numpy.floating[numpy._typing._64Bit]] + ... # note: b: numpy.dtype[numpy.floating[numpy._typing._64Bit]] + ... # note: c: numpy.dtype[numpy.floating[numpy._typing._64Bit]] + ... # note: d: numpy.dtype[numpy.floating[numpy._typing._64Bit]] + + """ + + def __len__(self, /) -> int: + """Implement ``len(self)``.""" + raise NotImplementedError + + def __getitem__(self, index: int, /) -> _T_co | _NestedSequence[_T_co]: + """Implement ``self[x]``.""" + raise NotImplementedError + + def __contains__(self, x: object, /) -> bool: + """Implement ``x in self``.""" + raise NotImplementedError + + def __iter__(self, /) -> Iterator[_T_co | _NestedSequence[_T_co]]: + """Implement ``iter(self)``.""" + raise NotImplementedError + + def __reversed__(self, /) -> Iterator[_T_co | _NestedSequence[_T_co]]: + """Implement ``reversed(self)``.""" + raise NotImplementedError + + def count(self, value: Any, /) -> int: + """Return the number of occurrences of `value`.""" + raise NotImplementedError + + def index(self, value: Any, /) -> int: + """Return the first index of `value`.""" + raise NotImplementedError diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_scalars.py b/venv/lib/python3.12/site-packages/numpy/_typing/_scalars.py new file mode 100644 index 0000000000000000000000000000000000000000..b9274e867c8357b200fe2da432757a7bb5bc260a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_scalars.py @@ -0,0 +1,30 @@ +from typing import Union, Any + +import numpy as np + +# NOTE: `_StrLike_co` and `_BytesLike_co` are pointless, as `np.str_` and +# `np.bytes_` are already subclasses of their builtin counterpart + +_CharLike_co = Union[str, bytes] + +# The 6 `Like_co` type-aliases below represent all scalars that can be +# coerced into `` (with the casting rule `same_kind`) +_BoolLike_co = Union[bool, np.bool] +_UIntLike_co = Union[_BoolLike_co, np.unsignedinteger[Any]] +_IntLike_co = Union[_BoolLike_co, int, np.integer[Any]] +_FloatLike_co = Union[_IntLike_co, float, np.floating[Any]] +_ComplexLike_co = Union[_FloatLike_co, complex, np.complexfloating[Any, Any]] +_TD64Like_co = Union[_IntLike_co, np.timedelta64] + +_NumberLike_co = Union[int, float, complex, np.number[Any], np.bool] +_ScalarLike_co = Union[ + int, + float, + complex, + str, + bytes, + np.generic, +] + +# `_VoidLike_co` is technically not a scalar, but it's close enough +_VoidLike_co = Union[tuple[Any, ...], np.void] diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_shape.py b/venv/lib/python3.12/site-packages/numpy/_typing/_shape.py new file mode 100644 index 0000000000000000000000000000000000000000..4f1204e47c6a20012e729514fdd78424126d45b8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_shape.py @@ -0,0 +1,7 @@ +from collections.abc import Sequence +from typing import Union, SupportsIndex + +_Shape = tuple[int, ...] + +# Anything that can be coerced to a shape tuple +_ShapeLike = Union[SupportsIndex, Sequence[SupportsIndex]] diff --git a/venv/lib/python3.12/site-packages/numpy/_typing/_ufunc.pyi b/venv/lib/python3.12/site-packages/numpy/_typing/_ufunc.pyi new file mode 100644 index 0000000000000000000000000000000000000000..f693341b521c1d683a4a197ed382b0146ec80351 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_typing/_ufunc.pyi @@ -0,0 +1,426 @@ +"""A module with private type-check-only `numpy.ufunc` subclasses. + +The signatures of the ufuncs are too varied to reasonably type +with a single class. So instead, `ufunc` has been expanded into +four private subclasses, one for each combination of +`~ufunc.nin` and `~ufunc.nout`. + +""" + +from typing import ( + Any, + Generic, + overload, + TypeVar, + Literal, + SupportsIndex, + Protocol, +) + +from numpy import ufunc, _CastingKind, _OrderKACF +from numpy.typing import NDArray + +from ._shape import _ShapeLike +from ._scalars import _ScalarLike_co +from ._array_like import ArrayLike, _ArrayLikeBool_co, _ArrayLikeInt_co +from ._dtype_like import DTypeLike + +_T = TypeVar("_T") +_2Tuple = tuple[_T, _T] +_3Tuple = tuple[_T, _T, _T] +_4Tuple = tuple[_T, _T, _T, _T] + +_NTypes = TypeVar("_NTypes", bound=int) +_IDType = TypeVar("_IDType", bound=Any) +_NameType = TypeVar("_NameType", bound=str) + + +class _SupportsArrayUFunc(Protocol): + def __array_ufunc__( + self, + ufunc: ufunc, + method: Literal["__call__", "reduce", "reduceat", "accumulate", "outer", "at"], + *inputs: Any, + **kwargs: Any, + ) -> Any: ... + + +# NOTE: `reduce`, `accumulate`, `reduceat` and `outer` raise a ValueError for +# ufuncs that don't accept two input arguments and return one output argument. +# In such cases the respective methods are simply typed as `None`. + +# NOTE: Similarly, `at` won't be defined for ufuncs that return +# multiple outputs; in such cases `at` is typed as `None` + +# NOTE: If 2 output types are returned then `out` must be a +# 2-tuple of arrays. Otherwise `None` or a plain array are also acceptable + +class _UFunc_Nin1_Nout1(ufunc, Generic[_NameType, _NTypes, _IDType]): # type: ignore[misc] + @property + def __name__(self) -> _NameType: ... + @property + def ntypes(self) -> _NTypes: ... + @property + def identity(self) -> _IDType: ... + @property + def nin(self) -> Literal[1]: ... + @property + def nout(self) -> Literal[1]: ... + @property + def nargs(self) -> Literal[2]: ... + @property + def signature(self) -> None: ... + @property + def reduce(self) -> None: ... + @property + def accumulate(self) -> None: ... + @property + def reduceat(self) -> None: ... + @property + def outer(self) -> None: ... + + @overload + def __call__( + self, + __x1: _ScalarLike_co, + out: None = ..., + *, + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _2Tuple[None | str] = ..., + ) -> Any: ... + @overload + def __call__( + self, + __x1: ArrayLike, + out: None | NDArray[Any] | tuple[NDArray[Any]] = ..., + *, + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _2Tuple[None | str] = ..., + ) -> NDArray[Any]: ... + @overload + def __call__( + self, + __x1: _SupportsArrayUFunc, + out: None | NDArray[Any] | tuple[NDArray[Any]] = ..., + *, + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _2Tuple[None | str] = ..., + ) -> Any: ... + + def at( + self, + a: _SupportsArrayUFunc, + indices: _ArrayLikeInt_co, + /, + ) -> None: ... + +class _UFunc_Nin2_Nout1(ufunc, Generic[_NameType, _NTypes, _IDType]): # type: ignore[misc] + @property + def __name__(self) -> _NameType: ... + @property + def ntypes(self) -> _NTypes: ... + @property + def identity(self) -> _IDType: ... + @property + def nin(self) -> Literal[2]: ... + @property + def nout(self) -> Literal[1]: ... + @property + def nargs(self) -> Literal[3]: ... + @property + def signature(self) -> None: ... + + @overload + def __call__( + self, + __x1: _ScalarLike_co, + __x2: _ScalarLike_co, + out: None = ..., + *, + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _3Tuple[None | str] = ..., + ) -> Any: ... + @overload + def __call__( + self, + __x1: ArrayLike, + __x2: ArrayLike, + out: None | NDArray[Any] | tuple[NDArray[Any]] = ..., + *, + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _3Tuple[None | str] = ..., + ) -> NDArray[Any]: ... + + def at( + self, + a: NDArray[Any], + indices: _ArrayLikeInt_co, + b: ArrayLike, + /, + ) -> None: ... + + def reduce( + self, + array: ArrayLike, + axis: None | _ShapeLike = ..., + dtype: DTypeLike = ..., + out: None | NDArray[Any] = ..., + keepdims: bool = ..., + initial: Any = ..., + where: _ArrayLikeBool_co = ..., + ) -> Any: ... + + def accumulate( + self, + array: ArrayLike, + axis: SupportsIndex = ..., + dtype: DTypeLike = ..., + out: None | NDArray[Any] = ..., + ) -> NDArray[Any]: ... + + def reduceat( + self, + array: ArrayLike, + indices: _ArrayLikeInt_co, + axis: SupportsIndex = ..., + dtype: DTypeLike = ..., + out: None | NDArray[Any] = ..., + ) -> NDArray[Any]: ... + + # Expand `**kwargs` into explicit keyword-only arguments + @overload + def outer( + self, + A: _ScalarLike_co, + B: _ScalarLike_co, + /, *, + out: None = ..., + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _3Tuple[None | str] = ..., + ) -> Any: ... + @overload + def outer( # type: ignore[misc] + self, + A: ArrayLike, + B: ArrayLike, + /, *, + out: None | NDArray[Any] | tuple[NDArray[Any]] = ..., + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _3Tuple[None | str] = ..., + ) -> NDArray[Any]: ... + +class _UFunc_Nin1_Nout2(ufunc, Generic[_NameType, _NTypes, _IDType]): # type: ignore[misc] + @property + def __name__(self) -> _NameType: ... + @property + def ntypes(self) -> _NTypes: ... + @property + def identity(self) -> _IDType: ... + @property + def nin(self) -> Literal[1]: ... + @property + def nout(self) -> Literal[2]: ... + @property + def nargs(self) -> Literal[3]: ... + @property + def signature(self) -> None: ... + @property + def at(self) -> None: ... + @property + def reduce(self) -> None: ... + @property + def accumulate(self) -> None: ... + @property + def reduceat(self) -> None: ... + @property + def outer(self) -> None: ... + + @overload + def __call__( + self, + __x1: _ScalarLike_co, + __out1: None = ..., + __out2: None = ..., + *, + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _3Tuple[None | str] = ..., + ) -> _2Tuple[Any]: ... + @overload + def __call__( + self, + __x1: ArrayLike, + __out1: None | NDArray[Any] = ..., + __out2: None | NDArray[Any] = ..., + *, + out: _2Tuple[NDArray[Any]] = ..., + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _3Tuple[None | str] = ..., + ) -> _2Tuple[NDArray[Any]]: ... + @overload + def __call__( + self, + __x1: _SupportsArrayUFunc, + __out1: None | NDArray[Any] = ..., + __out2: None | NDArray[Any] = ..., + *, + out: _2Tuple[NDArray[Any]] = ..., + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _3Tuple[None | str] = ..., + ) -> _2Tuple[Any]: ... + +class _UFunc_Nin2_Nout2(ufunc, Generic[_NameType, _NTypes, _IDType]): # type: ignore[misc] + @property + def __name__(self) -> _NameType: ... + @property + def ntypes(self) -> _NTypes: ... + @property + def identity(self) -> _IDType: ... + @property + def nin(self) -> Literal[2]: ... + @property + def nout(self) -> Literal[2]: ... + @property + def nargs(self) -> Literal[4]: ... + @property + def signature(self) -> None: ... + @property + def at(self) -> None: ... + @property + def reduce(self) -> None: ... + @property + def accumulate(self) -> None: ... + @property + def reduceat(self) -> None: ... + @property + def outer(self) -> None: ... + + @overload + def __call__( + self, + __x1: _ScalarLike_co, + __x2: _ScalarLike_co, + __out1: None = ..., + __out2: None = ..., + *, + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _4Tuple[None | str] = ..., + ) -> _2Tuple[Any]: ... + @overload + def __call__( + self, + __x1: ArrayLike, + __x2: ArrayLike, + __out1: None | NDArray[Any] = ..., + __out2: None | NDArray[Any] = ..., + *, + out: _2Tuple[NDArray[Any]] = ..., + where: None | _ArrayLikeBool_co = ..., + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _4Tuple[None | str] = ..., + ) -> _2Tuple[NDArray[Any]]: ... + +class _GUFunc_Nin2_Nout1(ufunc, Generic[_NameType, _NTypes, _IDType]): # type: ignore[misc] + @property + def __name__(self) -> _NameType: ... + @property + def ntypes(self) -> _NTypes: ... + @property + def identity(self) -> _IDType: ... + @property + def nin(self) -> Literal[2]: ... + @property + def nout(self) -> Literal[1]: ... + @property + def nargs(self) -> Literal[3]: ... + + # NOTE: In practice the only gufunc in the main namespace is `matmul`, + # so we can use its signature here + @property + def signature(self) -> Literal["(n?,k),(k,m?)->(n?,m?)"]: ... + @property + def reduce(self) -> None: ... + @property + def accumulate(self) -> None: ... + @property + def reduceat(self) -> None: ... + @property + def outer(self) -> None: ... + @property + def at(self) -> None: ... + + # Scalar for 1D array-likes; ndarray otherwise + @overload + def __call__( + self, + __x1: ArrayLike, + __x2: ArrayLike, + out: None = ..., + *, + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _3Tuple[None | str] = ..., + axes: list[_2Tuple[SupportsIndex]] = ..., + ) -> Any: ... + @overload + def __call__( + self, + __x1: ArrayLike, + __x2: ArrayLike, + out: NDArray[Any] | tuple[NDArray[Any]], + *, + casting: _CastingKind = ..., + order: _OrderKACF = ..., + dtype: DTypeLike = ..., + subok: bool = ..., + signature: str | _3Tuple[None | str] = ..., + axes: list[_2Tuple[SupportsIndex]] = ..., + ) -> NDArray[Any]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/_utils/__init__.py b/venv/lib/python3.12/site-packages/numpy/_utils/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..9794c4e0c4a13b1bdeb14d07d6cff383704901d9 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_utils/__init__.py @@ -0,0 +1,87 @@ +""" +This is a module for defining private helpers which do not depend on the +rest of NumPy. + +Everything in here must be self-contained so that it can be +imported anywhere else without creating circular imports. +If a utility requires the import of NumPy, it probably belongs +in ``numpy._core``. +""" + +import functools +import warnings +from ._convertions import asunicode, asbytes + + +def set_module(module): + """Private decorator for overriding __module__ on a function or class. + + Example usage:: + + @set_module('numpy') + def example(): + pass + + assert example.__module__ == 'numpy' + """ + def decorator(func): + if module is not None: + func.__module__ = module + return func + return decorator + + +def _rename_parameter(old_names, new_names, dep_version=None): + """ + Generate decorator for backward-compatible keyword renaming. + + Apply the decorator generated by `_rename_parameter` to functions with a + renamed parameter to maintain backward-compatibility. + + After decoration, the function behaves as follows: + If only the new parameter is passed into the function, behave as usual. + If only the old parameter is passed into the function (as a keyword), raise + a DeprecationWarning if `dep_version` is provided, and behave as usual + otherwise. + If both old and new parameters are passed into the function, raise a + DeprecationWarning if `dep_version` is provided, and raise the appropriate + TypeError (function got multiple values for argument). + + Parameters + ---------- + old_names : list of str + Old names of parameters + new_name : list of str + New names of parameters + dep_version : str, optional + Version of NumPy in which old parameter was deprecated in the format + 'X.Y.Z'. If supplied, the deprecation message will indicate that + support for the old parameter will be removed in version 'X.Y+2.Z' + + Notes + ----- + Untested with functions that accept *args. Probably won't work as written. + + """ + def decorator(fun): + @functools.wraps(fun) + def wrapper(*args, **kwargs): + for old_name, new_name in zip(old_names, new_names): + if old_name in kwargs: + if dep_version: + end_version = dep_version.split('.') + end_version[1] = str(int(end_version[1]) + 2) + end_version = '.'.join(end_version) + msg = (f"Use of keyword argument `{old_name}` is " + f"deprecated and replaced by `{new_name}`. " + f"Support for `{old_name}` will be removed " + f"in NumPy {end_version}.") + warnings.warn(msg, DeprecationWarning, stacklevel=2) + if new_name in kwargs: + msg = (f"{fun.__name__}() got multiple values for " + f"argument now known as `{new_name}`") + raise TypeError(msg) + kwargs[new_name] = kwargs.pop(old_name) + return fun(*args, **kwargs) + return wrapper + return decorator diff --git a/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/__init__.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/__init__.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..192afd207d78f7d2bf4d2932850a18338785d8b2 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/__init__.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/_convertions.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/_convertions.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..e27c093f19d42e298e760ce2ce48ef67c203a0c7 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/_convertions.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/_inspect.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/_inspect.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..c941928ed00dcc347de8ad5b9a7e0a2e3e8b4dc3 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/_inspect.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/_pep440.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/_pep440.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..2bae917168b8562466ca9f46b2ff2274bf88e841 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/_utils/__pycache__/_pep440.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/_utils/_convertions.py b/venv/lib/python3.12/site-packages/numpy/_utils/_convertions.py new file mode 100644 index 0000000000000000000000000000000000000000..ab15a8ba019f1b6a40ac3f562897fa4581323efc --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_utils/_convertions.py @@ -0,0 +1,18 @@ +""" +A set of methods retained from np.compat module that +are still used across codebase. +""" + +__all__ = ["asunicode", "asbytes"] + + +def asunicode(s): + if isinstance(s, bytes): + return s.decode('latin1') + return str(s) + + +def asbytes(s): + if isinstance(s, bytes): + return s + return str(s).encode('latin1') diff --git a/venv/lib/python3.12/site-packages/numpy/_utils/_inspect.py b/venv/lib/python3.12/site-packages/numpy/_utils/_inspect.py new file mode 100644 index 0000000000000000000000000000000000000000..9a874a71dd0a53e25a671c51bfdceec850702bfe --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_utils/_inspect.py @@ -0,0 +1,191 @@ +"""Subset of inspect module from upstream python + +We use this instead of upstream because upstream inspect is slow to import, and +significantly contributes to numpy import times. Importing this copy has almost +no overhead. + +""" +import types + +__all__ = ['getargspec', 'formatargspec'] + +# ----------------------------------------------------------- type-checking +def ismethod(object): + """Return true if the object is an instance method. + + Instance method objects provide these attributes: + __doc__ documentation string + __name__ name with which this method was defined + im_class class object in which this method belongs + im_func function object containing implementation of method + im_self instance to which this method is bound, or None + + """ + return isinstance(object, types.MethodType) + +def isfunction(object): + """Return true if the object is a user-defined function. + + Function objects provide these attributes: + __doc__ documentation string + __name__ name with which this function was defined + func_code code object containing compiled function bytecode + func_defaults tuple of any default values for arguments + func_doc (same as __doc__) + func_globals global namespace in which this function was defined + func_name (same as __name__) + + """ + return isinstance(object, types.FunctionType) + +def iscode(object): + """Return true if the object is a code object. + + Code objects provide these attributes: + co_argcount number of arguments (not including * or ** args) + co_code string of raw compiled bytecode + co_consts tuple of constants used in the bytecode + co_filename name of file in which this code object was created + co_firstlineno number of first line in Python source code + co_flags bitmap: 1=optimized | 2=newlocals | 4=*arg | 8=**arg + co_lnotab encoded mapping of line numbers to bytecode indices + co_name name with which this code object was defined + co_names tuple of names of local variables + co_nlocals number of local variables + co_stacksize virtual machine stack space required + co_varnames tuple of names of arguments and local variables + + """ + return isinstance(object, types.CodeType) + +# ------------------------------------------------ argument list extraction +# These constants are from Python's compile.h. +CO_OPTIMIZED, CO_NEWLOCALS, CO_VARARGS, CO_VARKEYWORDS = 1, 2, 4, 8 + +def getargs(co): + """Get information about the arguments accepted by a code object. + + Three things are returned: (args, varargs, varkw), where 'args' is + a list of argument names (possibly containing nested lists), and + 'varargs' and 'varkw' are the names of the * and ** arguments or None. + + """ + + if not iscode(co): + raise TypeError('arg is not a code object') + + nargs = co.co_argcount + names = co.co_varnames + args = list(names[:nargs]) + + # The following acrobatics are for anonymous (tuple) arguments. + # Which we do not need to support, so remove to avoid importing + # the dis module. + for i in range(nargs): + if args[i][:1] in ['', '.']: + raise TypeError("tuple function arguments are not supported") + varargs = None + if co.co_flags & CO_VARARGS: + varargs = co.co_varnames[nargs] + nargs = nargs + 1 + varkw = None + if co.co_flags & CO_VARKEYWORDS: + varkw = co.co_varnames[nargs] + return args, varargs, varkw + +def getargspec(func): + """Get the names and default values of a function's arguments. + + A tuple of four things is returned: (args, varargs, varkw, defaults). + 'args' is a list of the argument names (it may contain nested lists). + 'varargs' and 'varkw' are the names of the * and ** arguments or None. + 'defaults' is an n-tuple of the default values of the last n arguments. + + """ + + if ismethod(func): + func = func.__func__ + if not isfunction(func): + raise TypeError('arg is not a Python function') + args, varargs, varkw = getargs(func.__code__) + return args, varargs, varkw, func.__defaults__ + +def getargvalues(frame): + """Get information about arguments passed into a particular frame. + + A tuple of four things is returned: (args, varargs, varkw, locals). + 'args' is a list of the argument names (it may contain nested lists). + 'varargs' and 'varkw' are the names of the * and ** arguments or None. + 'locals' is the locals dictionary of the given frame. + + """ + args, varargs, varkw = getargs(frame.f_code) + return args, varargs, varkw, frame.f_locals + +def joinseq(seq): + if len(seq) == 1: + return '(' + seq[0] + ',)' + else: + return '(' + ', '.join(seq) + ')' + +def strseq(object, convert, join=joinseq): + """Recursively walk a sequence, stringifying each element. + + """ + if type(object) in [list, tuple]: + return join([strseq(_o, convert, join) for _o in object]) + else: + return convert(object) + +def formatargspec(args, varargs=None, varkw=None, defaults=None, + formatarg=str, + formatvarargs=lambda name: '*' + name, + formatvarkw=lambda name: '**' + name, + formatvalue=lambda value: '=' + repr(value), + join=joinseq): + """Format an argument spec from the 4 values returned by getargspec. + + The first four arguments are (args, varargs, varkw, defaults). The + other four arguments are the corresponding optional formatting functions + that are called to turn names and values into strings. The ninth + argument is an optional function to format the sequence of arguments. + + """ + specs = [] + if defaults: + firstdefault = len(args) - len(defaults) + for i in range(len(args)): + spec = strseq(args[i], formatarg, join) + if defaults and i >= firstdefault: + spec = spec + formatvalue(defaults[i - firstdefault]) + specs.append(spec) + if varargs is not None: + specs.append(formatvarargs(varargs)) + if varkw is not None: + specs.append(formatvarkw(varkw)) + return '(' + ', '.join(specs) + ')' + +def formatargvalues(args, varargs, varkw, locals, + formatarg=str, + formatvarargs=lambda name: '*' + name, + formatvarkw=lambda name: '**' + name, + formatvalue=lambda value: '=' + repr(value), + join=joinseq): + """Format an argument spec from the 4 values returned by getargvalues. + + The first four arguments are (args, varargs, varkw, locals). The + next four arguments are the corresponding optional formatting functions + that are called to turn names and values into strings. The ninth + argument is an optional function to format the sequence of arguments. + + """ + def convert(name, locals=locals, + formatarg=formatarg, formatvalue=formatvalue): + return formatarg(name) + formatvalue(locals[name]) + specs = [strseq(arg, convert, join) for arg in args] + + if varargs: + specs.append(formatvarargs(varargs) + formatvalue(locals[varargs])) + if varkw: + specs.append(formatvarkw(varkw) + formatvalue(locals[varkw])) + return '(' + ', '.join(specs) + ')' diff --git a/venv/lib/python3.12/site-packages/numpy/_utils/_pep440.py b/venv/lib/python3.12/site-packages/numpy/_utils/_pep440.py new file mode 100644 index 0000000000000000000000000000000000000000..73d0afb5e95f099f8b04253177e8a3ab3d80d0c4 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/_utils/_pep440.py @@ -0,0 +1,487 @@ +"""Utility to compare pep440 compatible version strings. + +The LooseVersion and StrictVersion classes that distutils provides don't +work; they don't recognize anything like alpha/beta/rc/dev versions. +""" + +# Copyright (c) Donald Stufft and individual contributors. +# All rights reserved. + +# Redistribution and use in source and binary forms, with or without +# modification, are permitted provided that the following conditions are met: + +# 1. Redistributions of source code must retain the above copyright notice, +# this list of conditions and the following disclaimer. + +# 2. Redistributions in binary form must reproduce the above copyright +# notice, this list of conditions and the following disclaimer in the +# documentation and/or other materials provided with the distribution. + +# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" +# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE +# ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE +# LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR +# CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF +# SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS +# INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN +# CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) +# ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE +# POSSIBILITY OF SUCH DAMAGE. + +import collections +import itertools +import re + + +__all__ = [ + "parse", "Version", "LegacyVersion", "InvalidVersion", "VERSION_PATTERN", +] + + +# BEGIN packaging/_structures.py + + +class Infinity: + def __repr__(self): + return "Infinity" + + def __hash__(self): + return hash(repr(self)) + + def __lt__(self, other): + return False + + def __le__(self, other): + return False + + def __eq__(self, other): + return isinstance(other, self.__class__) + + def __ne__(self, other): + return not isinstance(other, self.__class__) + + def __gt__(self, other): + return True + + def __ge__(self, other): + return True + + def __neg__(self): + return NegativeInfinity + + +Infinity = Infinity() + + +class NegativeInfinity: + def __repr__(self): + return "-Infinity" + + def __hash__(self): + return hash(repr(self)) + + def __lt__(self, other): + return True + + def __le__(self, other): + return True + + def __eq__(self, other): + return isinstance(other, self.__class__) + + def __ne__(self, other): + return not isinstance(other, self.__class__) + + def __gt__(self, other): + return False + + def __ge__(self, other): + return False + + def __neg__(self): + return Infinity + + +# BEGIN packaging/version.py + + +NegativeInfinity = NegativeInfinity() + +_Version = collections.namedtuple( + "_Version", + ["epoch", "release", "dev", "pre", "post", "local"], +) + + +def parse(version): + """ + Parse the given version string and return either a :class:`Version` object + or a :class:`LegacyVersion` object depending on if the given version is + a valid PEP 440 version or a legacy version. + """ + try: + return Version(version) + except InvalidVersion: + return LegacyVersion(version) + + +class InvalidVersion(ValueError): + """ + An invalid version was found, users should refer to PEP 440. + """ + + +class _BaseVersion: + + def __hash__(self): + return hash(self._key) + + def __lt__(self, other): + return self._compare(other, lambda s, o: s < o) + + def __le__(self, other): + return self._compare(other, lambda s, o: s <= o) + + def __eq__(self, other): + return self._compare(other, lambda s, o: s == o) + + def __ge__(self, other): + return self._compare(other, lambda s, o: s >= o) + + def __gt__(self, other): + return self._compare(other, lambda s, o: s > o) + + def __ne__(self, other): + return self._compare(other, lambda s, o: s != o) + + def _compare(self, other, method): + if not isinstance(other, _BaseVersion): + return NotImplemented + + return method(self._key, other._key) + + +class LegacyVersion(_BaseVersion): + + def __init__(self, version): + self._version = str(version) + self._key = _legacy_cmpkey(self._version) + + def __str__(self): + return self._version + + def __repr__(self): + return "".format(repr(str(self))) + + @property + def public(self): + return self._version + + @property + def base_version(self): + return self._version + + @property + def local(self): + return None + + @property + def is_prerelease(self): + return False + + @property + def is_postrelease(self): + return False + + +_legacy_version_component_re = re.compile( + r"(\d+ | [a-z]+ | \.| -)", re.VERBOSE, +) + +_legacy_version_replacement_map = { + "pre": "c", "preview": "c", "-": "final-", "rc": "c", "dev": "@", +} + + +def _parse_version_parts(s): + for part in _legacy_version_component_re.split(s): + part = _legacy_version_replacement_map.get(part, part) + + if not part or part == ".": + continue + + if part[:1] in "0123456789": + # pad for numeric comparison + yield part.zfill(8) + else: + yield "*" + part + + # ensure that alpha/beta/candidate are before final + yield "*final" + + +def _legacy_cmpkey(version): + # We hardcode an epoch of -1 here. A PEP 440 version can only have an epoch + # greater than or equal to 0. This will effectively put the LegacyVersion, + # which uses the defacto standard originally implemented by setuptools, + # as before all PEP 440 versions. + epoch = -1 + + # This scheme is taken from pkg_resources.parse_version setuptools prior to + # its adoption of the packaging library. + parts = [] + for part in _parse_version_parts(version.lower()): + if part.startswith("*"): + # remove "-" before a prerelease tag + if part < "*final": + while parts and parts[-1] == "*final-": + parts.pop() + + # remove trailing zeros from each series of numeric parts + while parts and parts[-1] == "00000000": + parts.pop() + + parts.append(part) + parts = tuple(parts) + + return epoch, parts + + +# Deliberately not anchored to the start and end of the string, to make it +# easier for 3rd party code to reuse +VERSION_PATTERN = r""" + v? + (?: + (?:(?P[0-9]+)!)? # epoch + (?P[0-9]+(?:\.[0-9]+)*) # release segment + (?P
                                          # pre-release
+            [-_\.]?
+            (?P(a|b|c|rc|alpha|beta|pre|preview))
+            [-_\.]?
+            (?P[0-9]+)?
+        )?
+        (?P                                         # post release
+            (?:-(?P[0-9]+))
+            |
+            (?:
+                [-_\.]?
+                (?Ppost|rev|r)
+                [-_\.]?
+                (?P[0-9]+)?
+            )
+        )?
+        (?P                                          # dev release
+            [-_\.]?
+            (?Pdev)
+            [-_\.]?
+            (?P[0-9]+)?
+        )?
+    )
+    (?:\+(?P[a-z0-9]+(?:[-_\.][a-z0-9]+)*))?       # local version
+"""
+
+
+class Version(_BaseVersion):
+
+    _regex = re.compile(
+        r"^\s*" + VERSION_PATTERN + r"\s*$",
+        re.VERBOSE | re.IGNORECASE,
+    )
+
+    def __init__(self, version):
+        # Validate the version and parse it into pieces
+        match = self._regex.search(version)
+        if not match:
+            raise InvalidVersion("Invalid version: '{0}'".format(version))
+
+        # Store the parsed out pieces of the version
+        self._version = _Version(
+            epoch=int(match.group("epoch")) if match.group("epoch") else 0,
+            release=tuple(int(i) for i in match.group("release").split(".")),
+            pre=_parse_letter_version(
+                match.group("pre_l"),
+                match.group("pre_n"),
+            ),
+            post=_parse_letter_version(
+                match.group("post_l"),
+                match.group("post_n1") or match.group("post_n2"),
+            ),
+            dev=_parse_letter_version(
+                match.group("dev_l"),
+                match.group("dev_n"),
+            ),
+            local=_parse_local_version(match.group("local")),
+        )
+
+        # Generate a key which will be used for sorting
+        self._key = _cmpkey(
+            self._version.epoch,
+            self._version.release,
+            self._version.pre,
+            self._version.post,
+            self._version.dev,
+            self._version.local,
+        )
+
+    def __repr__(self):
+        return "".format(repr(str(self)))
+
+    def __str__(self):
+        parts = []
+
+        # Epoch
+        if self._version.epoch != 0:
+            parts.append("{0}!".format(self._version.epoch))
+
+        # Release segment
+        parts.append(".".join(str(x) for x in self._version.release))
+
+        # Pre-release
+        if self._version.pre is not None:
+            parts.append("".join(str(x) for x in self._version.pre))
+
+        # Post-release
+        if self._version.post is not None:
+            parts.append(".post{0}".format(self._version.post[1]))
+
+        # Development release
+        if self._version.dev is not None:
+            parts.append(".dev{0}".format(self._version.dev[1]))
+
+        # Local version segment
+        if self._version.local is not None:
+            parts.append(
+                "+{0}".format(".".join(str(x) for x in self._version.local))
+            )
+
+        return "".join(parts)
+
+    @property
+    def public(self):
+        return str(self).split("+", 1)[0]
+
+    @property
+    def base_version(self):
+        parts = []
+
+        # Epoch
+        if self._version.epoch != 0:
+            parts.append("{0}!".format(self._version.epoch))
+
+        # Release segment
+        parts.append(".".join(str(x) for x in self._version.release))
+
+        return "".join(parts)
+
+    @property
+    def local(self):
+        version_string = str(self)
+        if "+" in version_string:
+            return version_string.split("+", 1)[1]
+
+    @property
+    def is_prerelease(self):
+        return bool(self._version.dev or self._version.pre)
+
+    @property
+    def is_postrelease(self):
+        return bool(self._version.post)
+
+
+def _parse_letter_version(letter, number):
+    if letter:
+        # We assume there is an implicit 0 in a pre-release if there is
+        # no numeral associated with it.
+        if number is None:
+            number = 0
+
+        # We normalize any letters to their lower-case form
+        letter = letter.lower()
+
+        # We consider some words to be alternate spellings of other words and
+        # in those cases we want to normalize the spellings to our preferred
+        # spelling.
+        if letter == "alpha":
+            letter = "a"
+        elif letter == "beta":
+            letter = "b"
+        elif letter in ["c", "pre", "preview"]:
+            letter = "rc"
+        elif letter in ["rev", "r"]:
+            letter = "post"
+
+        return letter, int(number)
+    if not letter and number:
+        # We assume that if we are given a number but not given a letter,
+        # then this is using the implicit post release syntax (e.g., 1.0-1)
+        letter = "post"
+
+        return letter, int(number)
+
+
+_local_version_seperators = re.compile(r"[\._-]")
+
+
+def _parse_local_version(local):
+    """
+    Takes a string like abc.1.twelve and turns it into ("abc", 1, "twelve").
+    """
+    if local is not None:
+        return tuple(
+            part.lower() if not part.isdigit() else int(part)
+            for part in _local_version_seperators.split(local)
+        )
+
+
+def _cmpkey(epoch, release, pre, post, dev, local):
+    # When we compare a release version, we want to compare it with all of the
+    # trailing zeros removed. So we'll use a reverse the list, drop all the now
+    # leading zeros until we come to something non-zero, then take the rest,
+    # re-reverse it back into the correct order, and make it a tuple and use
+    # that for our sorting key.
+    release = tuple(
+        reversed(list(
+            itertools.dropwhile(
+                lambda x: x == 0,
+                reversed(release),
+            )
+        ))
+    )
+
+    # We need to "trick" the sorting algorithm to put 1.0.dev0 before 1.0a0.
+    # We'll do this by abusing the pre-segment, but we _only_ want to do this
+    # if there is no pre- or a post-segment. If we have one of those, then
+    # the normal sorting rules will handle this case correctly.
+    if pre is None and post is None and dev is not None:
+        pre = -Infinity
+    # Versions without a pre-release (except as noted above) should sort after
+    # those with one.
+    elif pre is None:
+        pre = Infinity
+
+    # Versions without a post-segment should sort before those with one.
+    if post is None:
+        post = -Infinity
+
+    # Versions without a development segment should sort after those with one.
+    if dev is None:
+        dev = Infinity
+
+    if local is None:
+        # Versions without a local segment should sort before those with one.
+        local = -Infinity
+    else:
+        # Versions with a local segment need that segment parsed to implement
+        # the sorting rules in PEP440.
+        # - Alphanumeric segments sort before numeric segments
+        # - Alphanumeric segments sort lexicographically
+        # - Numeric segments sort numerically
+        # - Shorter versions sort before longer versions when the prefixes
+        #   match exactly
+        local = tuple(
+            (i, "") if isinstance(i, int) else (-Infinity, i)
+            for i in local
+        )
+
+    return epoch, release, pre, post, dev, local
diff --git a/venv/lib/python3.12/site-packages/numpy/char/__init__.py b/venv/lib/python3.12/site-packages/numpy/char/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..9eb66c180f59a4ede79f4c02b439c1f01eaa96b7
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/char/__init__.py
@@ -0,0 +1,2 @@
+from numpy._core.defchararray import __all__, __doc__
+from numpy._core.defchararray import *
diff --git a/venv/lib/python3.12/site-packages/numpy/char/__init__.pyi b/venv/lib/python3.12/site-packages/numpy/char/__init__.pyi
new file mode 100644
index 0000000000000000000000000000000000000000..3a98cbb42ecc6596f0691c01070ea1ad088284be
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/char/__init__.pyi
@@ -0,0 +1,57 @@
+from numpy._core.defchararray import (
+    equal as equal,
+    not_equal as not_equal,
+    greater_equal as greater_equal,
+    less_equal as less_equal,
+    greater as greater,
+    less as less,
+    str_len as str_len,
+    add as add,
+    multiply as multiply,
+    mod as mod,
+    capitalize as capitalize,
+    center as center,
+    count as count,
+    decode as decode,
+    encode as encode,
+    endswith as endswith,
+    expandtabs as expandtabs,
+    find as find,
+    index as index,
+    isalnum as isalnum,
+    isalpha as isalpha,
+    isdigit as isdigit,
+    islower as islower,
+    isspace as isspace,
+    istitle as istitle,
+    isupper as isupper,
+    join as join,
+    ljust as ljust,
+    lower as lower,
+    lstrip as lstrip,
+    partition as partition,
+    replace as replace,
+    rfind as rfind,
+    rindex as rindex,
+    rjust as rjust,
+    rpartition as rpartition,
+    rsplit as rsplit,
+    rstrip as rstrip,
+    split as split,
+    splitlines as splitlines,
+    startswith as startswith,
+    strip as strip,
+    swapcase as swapcase,
+    title as title,
+    translate as translate,
+    upper as upper,
+    zfill as zfill,
+    isnumeric as isnumeric,
+    isdecimal as isdecimal,
+    array as array,
+    asarray as asarray,
+    compare_chararrays as compare_chararrays,
+    chararray as chararray
+)
+
+__all__: list[str]
diff --git a/venv/lib/python3.12/site-packages/numpy/char/__pycache__/__init__.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/char/__pycache__/__init__.cpython-312.pyc
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diff --git a/venv/lib/python3.12/site-packages/numpy/compat/__init__.py b/venv/lib/python3.12/site-packages/numpy/compat/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..729265aa9c27736861dc16d803ae7c186f2958c4
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/compat/__init__.py
@@ -0,0 +1,29 @@
+"""
+Compatibility module.
+
+This module contains duplicated code from Python itself or 3rd party
+extensions, which may be included for the following reasons:
+
+  * compatibility
+  * we may only need a small subset of the copied library/module
+
+This module is deprecated since 1.26.0 and will be removed in future versions.
+
+"""
+
+import warnings
+
+from .._utils import _inspect
+from .._utils._inspect import getargspec, formatargspec
+from . import py3k
+from .py3k import *
+
+warnings.warn(
+    "`np.compat`, which was used during the Python 2 to 3 transition,"
+    " is deprecated since 1.26.0, and will be removed",
+    DeprecationWarning, stacklevel=2
+)
+
+__all__ = []
+__all__.extend(_inspect.__all__)
+__all__.extend(py3k.__all__)
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diff --git a/venv/lib/python3.12/site-packages/numpy/compat/py3k.py b/venv/lib/python3.12/site-packages/numpy/compat/py3k.py
new file mode 100644
index 0000000000000000000000000000000000000000..d02c9f8fe341859202319f9b7ed65818f139e269
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/compat/py3k.py
@@ -0,0 +1,145 @@
+"""
+Python 3.X compatibility tools.
+
+While this file was originally intended for Python 2 -> 3 transition,
+it is now used to create a compatibility layer between different
+minor versions of Python 3.
+
+While the active version of numpy may not support a given version of python, we
+allow downstream libraries to continue to use these shims for forward
+compatibility with numpy while they transition their code to newer versions of
+Python.
+"""
+__all__ = ['bytes', 'asbytes', 'isfileobj', 'getexception', 'strchar',
+           'unicode', 'asunicode', 'asbytes_nested', 'asunicode_nested',
+           'asstr', 'open_latin1', 'long', 'basestring', 'sixu',
+           'integer_types', 'is_pathlib_path', 'npy_load_module', 'Path',
+           'pickle', 'contextlib_nullcontext', 'os_fspath', 'os_PathLike']
+
+import sys
+import os
+from pathlib import Path
+import io
+try:
+    import pickle5 as pickle
+except ImportError:
+    import pickle
+
+long = int
+integer_types = (int,)
+basestring = str
+unicode = str
+bytes = bytes
+
+def asunicode(s):
+    if isinstance(s, bytes):
+        return s.decode('latin1')
+    return str(s)
+
+def asbytes(s):
+    if isinstance(s, bytes):
+        return s
+    return str(s).encode('latin1')
+
+def asstr(s):
+    if isinstance(s, bytes):
+        return s.decode('latin1')
+    return str(s)
+
+def isfileobj(f):
+    if not isinstance(f, (io.FileIO, io.BufferedReader, io.BufferedWriter)):
+        return False
+    try:
+        # BufferedReader/Writer may raise OSError when
+        # fetching `fileno()` (e.g. when wrapping BytesIO).
+        f.fileno()
+        return True
+    except OSError:
+        return False
+
+def open_latin1(filename, mode='r'):
+    return open(filename, mode=mode, encoding='iso-8859-1')
+
+def sixu(s):
+    return s
+
+strchar = 'U'
+
+def getexception():
+    return sys.exc_info()[1]
+
+def asbytes_nested(x):
+    if hasattr(x, '__iter__') and not isinstance(x, (bytes, unicode)):
+        return [asbytes_nested(y) for y in x]
+    else:
+        return asbytes(x)
+
+def asunicode_nested(x):
+    if hasattr(x, '__iter__') and not isinstance(x, (bytes, unicode)):
+        return [asunicode_nested(y) for y in x]
+    else:
+        return asunicode(x)
+
+def is_pathlib_path(obj):
+    """
+    Check whether obj is a `pathlib.Path` object.
+
+    Prefer using ``isinstance(obj, os.PathLike)`` instead of this function.
+    """
+    return isinstance(obj, Path)
+
+# from Python 3.7
+class contextlib_nullcontext:
+    """Context manager that does no additional processing.
+
+    Used as a stand-in for a normal context manager, when a particular
+    block of code is only sometimes used with a normal context manager:
+
+    cm = optional_cm if condition else nullcontext()
+    with cm:
+        # Perform operation, using optional_cm if condition is True
+
+    .. note::
+        Prefer using `contextlib.nullcontext` instead of this context manager.
+    """
+
+    def __init__(self, enter_result=None):
+        self.enter_result = enter_result
+
+    def __enter__(self):
+        return self.enter_result
+
+    def __exit__(self, *excinfo):
+        pass
+
+
+def npy_load_module(name, fn, info=None):
+    """
+    Load a module. Uses ``load_module`` which will be deprecated in python
+    3.12. An alternative that uses ``exec_module`` is in
+    numpy.distutils.misc_util.exec_mod_from_location
+
+    .. versionadded:: 1.11.2
+
+    Parameters
+    ----------
+    name : str
+        Full module name.
+    fn : str
+        Path to module file.
+    info : tuple, optional
+        Only here for backward compatibility with Python 2.*.
+
+    Returns
+    -------
+    mod : module
+
+    """
+    # Explicitly lazy import this to avoid paying the cost
+    # of importing importlib at startup
+    from importlib.machinery import SourceFileLoader
+    return SourceFileLoader(name, fn).load_module()
+
+
+os_fspath = os.fspath
+os_PathLike = os.PathLike
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diff --git a/venv/lib/python3.12/site-packages/numpy/conftest.py b/venv/lib/python3.12/site-packages/numpy/conftest.py
new file mode 100644
index 0000000000000000000000000000000000000000..a6c329790e164bc34226e3672a6c05d415e2e96e
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/conftest.py
@@ -0,0 +1,138 @@
+"""
+Pytest configuration and fixtures for the Numpy test suite.
+"""
+import os
+import tempfile
+
+import hypothesis
+import pytest
+import numpy
+
+from numpy._core._multiarray_tests import get_fpu_mode
+
+
+_old_fpu_mode = None
+_collect_results = {}
+
+# Use a known and persistent tmpdir for hypothesis' caches, which
+# can be automatically cleared by the OS or user.
+hypothesis.configuration.set_hypothesis_home_dir(
+    os.path.join(tempfile.gettempdir(), ".hypothesis")
+)
+
+# We register two custom profiles for Numpy - for details see
+# https://hypothesis.readthedocs.io/en/latest/settings.html
+# The first is designed for our own CI runs; the latter also 
+# forces determinism and is designed for use via np.test()
+hypothesis.settings.register_profile(
+    name="numpy-profile", deadline=None, print_blob=True,
+)
+hypothesis.settings.register_profile(
+    name="np.test() profile",
+    deadline=None, print_blob=True, database=None, derandomize=True,
+    suppress_health_check=list(hypothesis.HealthCheck),
+)
+# Note that the default profile is chosen based on the presence 
+# of pytest.ini, but can be overridden by passing the 
+# --hypothesis-profile=NAME argument to pytest.
+_pytest_ini = os.path.join(os.path.dirname(__file__), "..", "pytest.ini")
+hypothesis.settings.load_profile(
+    "numpy-profile" if os.path.isfile(_pytest_ini) else "np.test() profile"
+)
+
+# The experimentalAPI is used in _umath_tests
+os.environ["NUMPY_EXPERIMENTAL_DTYPE_API"] = "1"
+
+def pytest_configure(config):
+    config.addinivalue_line("markers",
+        "valgrind_error: Tests that are known to error under valgrind.")
+    config.addinivalue_line("markers",
+        "leaks_references: Tests that are known to leak references.")
+    config.addinivalue_line("markers",
+        "slow: Tests that are very slow.")
+    config.addinivalue_line("markers",
+        "slow_pypy: Tests that are very slow on pypy.")
+
+
+def pytest_addoption(parser):
+    parser.addoption("--available-memory", action="store", default=None,
+                     help=("Set amount of memory available for running the "
+                           "test suite. This can result to tests requiring "
+                           "especially large amounts of memory to be skipped. "
+                           "Equivalent to setting environment variable "
+                           "NPY_AVAILABLE_MEM. Default: determined"
+                           "automatically."))
+
+
+def pytest_sessionstart(session):
+    available_mem = session.config.getoption('available_memory')
+    if available_mem is not None:
+        os.environ['NPY_AVAILABLE_MEM'] = available_mem
+
+
+#FIXME when yield tests are gone.
+@pytest.hookimpl()
+def pytest_itemcollected(item):
+    """
+    Check FPU precision mode was not changed during test collection.
+
+    The clumsy way we do it here is mainly necessary because numpy
+    still uses yield tests, which can execute code at test collection
+    time.
+    """
+    global _old_fpu_mode
+
+    mode = get_fpu_mode()
+
+    if _old_fpu_mode is None:
+        _old_fpu_mode = mode
+    elif mode != _old_fpu_mode:
+        _collect_results[item] = (_old_fpu_mode, mode)
+        _old_fpu_mode = mode
+
+
+@pytest.fixture(scope="function", autouse=True)
+def check_fpu_mode(request):
+    """
+    Check FPU precision mode was not changed during the test.
+    """
+    old_mode = get_fpu_mode()
+    yield
+    new_mode = get_fpu_mode()
+
+    if old_mode != new_mode:
+        raise AssertionError("FPU precision mode changed from {0:#x} to {1:#x}"
+                             " during the test".format(old_mode, new_mode))
+
+    collect_result = _collect_results.get(request.node)
+    if collect_result is not None:
+        old_mode, new_mode = collect_result
+        raise AssertionError("FPU precision mode changed from {0:#x} to {1:#x}"
+                             " when collecting the test".format(old_mode,
+                                                                new_mode))
+
+
+@pytest.fixture(autouse=True)
+def add_np(doctest_namespace):
+    doctest_namespace['np'] = numpy
+
+@pytest.fixture(autouse=True)
+def env_setup(monkeypatch):
+    monkeypatch.setenv('PYTHONHASHSEED', '0')
+
+
+@pytest.fixture(params=[True, False])
+def weak_promotion(request):
+    """
+    Fixture to ensure "legacy" promotion state or change it to use the new
+    weak promotion (plus warning).  `old_promotion` should be used as a
+    parameter in the function.
+    """
+    state = numpy._get_promotion_state()
+    if request.param:
+        numpy._set_promotion_state("weak_and_warn")
+    else:
+        numpy._set_promotion_state("legacy")
+
+    yield request.param
+    numpy._set_promotion_state(state)
diff --git a/venv/lib/python3.12/site-packages/numpy/core/__init__.py b/venv/lib/python3.12/site-packages/numpy/core/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..e7d3c678b429dbde0333d4e79a6d2a860c6d678f
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/__init__.py
@@ -0,0 +1,32 @@
+"""
+The `numpy.core` submodule exists solely for backward compatibility
+purposes. The original `core` was renamed to `_core` and made private.
+`numpy.core` will be removed in the future.
+"""
+from numpy import _core
+from ._utils import _raise_warning
+
+
+# We used to use `np.core._ufunc_reconstruct` to unpickle.
+# This is unnecessary, but old pickles saved before 1.20 will be using it,
+# and there is no reason to break loading them.
+def _ufunc_reconstruct(module, name):
+    # The `fromlist` kwarg is required to ensure that `mod` points to the
+    # inner-most module rather than the parent package when module name is
+    # nested. This makes it possible to pickle non-toplevel ufuncs such as
+    # scipy.special.expit for instance.
+    mod = __import__(module, fromlist=[name])
+    return getattr(mod, name)
+
+
+# force lazy-loading of submodules to ensure a warning is printed
+
+__all__ = ["arrayprint", "defchararray", "_dtype_ctypes", "_dtype",
+           "einsumfunc", "fromnumeric", "function_base", "getlimits",
+           "_internal", "multiarray", "_multiarray_umath", "numeric",
+           "numerictypes", "overrides", "records", "shape_base", "umath"]
+
+def __getattr__(attr_name):
+    attr = getattr(_core, attr_name)
+    _raise_warning(attr_name)
+    return attr
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diff --git a/venv/lib/python3.12/site-packages/numpy/core/_dtype.py b/venv/lib/python3.12/site-packages/numpy/core/_dtype.py
new file mode 100644
index 0000000000000000000000000000000000000000..613a1d259a1567dd28e5524b6a85a4556c16dce8
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/_dtype.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import _dtype
+    from ._utils import _raise_warning
+    ret = getattr(_dtype, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core._dtype' has no attribute {attr_name}")
+    _raise_warning(attr_name, "_dtype")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/_dtype_ctypes.py b/venv/lib/python3.12/site-packages/numpy/core/_dtype_ctypes.py
new file mode 100644
index 0000000000000000000000000000000000000000..0dadd7949ecb2ad34c4342d590df9dcf7d32bd06
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/_dtype_ctypes.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import _dtype_ctypes
+    from ._utils import _raise_warning
+    ret = getattr(_dtype_ctypes, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core._dtype_ctypes' has no attribute {attr_name}")
+    _raise_warning(attr_name, "_dtype_ctypes")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/_internal.py b/venv/lib/python3.12/site-packages/numpy/core/_internal.py
new file mode 100644
index 0000000000000000000000000000000000000000..7755c7c35505af3f326b22c1e6a9a4052f2a5750
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/_internal.py
@@ -0,0 +1,25 @@
+from numpy._core import _internal
+
+# Build a new array from the information in a pickle.
+# Note that the name numpy.core._internal._reconstruct is embedded in
+# pickles of ndarrays made with NumPy before release 1.0
+# so don't remove the name here, or you'll
+# break backward compatibility.
+def _reconstruct(subtype, shape, dtype):
+    from numpy import ndarray
+    return ndarray.__new__(subtype, shape, dtype)
+
+
+# Pybind11 (in versions <= 2.11.1) imports _dtype_from_pep3118 from the
+# _internal submodule, therefore it must be importable without a warning.
+_dtype_from_pep3118 = _internal._dtype_from_pep3118
+
+def __getattr__(attr_name):
+    from numpy._core import _internal
+    from ._utils import _raise_warning
+    ret = getattr(_internal, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core._internal' has no attribute {attr_name}")
+    _raise_warning(attr_name, "_internal")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/_multiarray_umath.py b/venv/lib/python3.12/site-packages/numpy/core/_multiarray_umath.py
new file mode 100644
index 0000000000000000000000000000000000000000..04cc88229aac72690f516956352ba2c398bde703
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/_multiarray_umath.py
@@ -0,0 +1,55 @@
+from numpy._core import _multiarray_umath
+from numpy import ufunc
+
+for item in _multiarray_umath.__dir__():
+    # ufuncs appear in pickles with a path in numpy.core._multiarray_umath
+    # and so must import from this namespace without warning or error
+    attr = getattr(_multiarray_umath, item)
+    if isinstance(attr, ufunc):
+        globals()[item] = attr
+
+
+def __getattr__(attr_name):
+    from numpy._core import _multiarray_umath
+    from ._utils import _raise_warning
+
+    if attr_name in {"_ARRAY_API", "_UFUNC_API"}:
+        from numpy.version import short_version
+        import textwrap
+        import traceback
+        import sys
+
+        msg = textwrap.dedent(f"""
+            A module that was compiled using NumPy 1.x cannot be run in
+            NumPy {short_version} as it may crash. To support both 1.x and 2.x
+            versions of NumPy, modules must be compiled with NumPy 2.0.
+            Some module may need to rebuild instead e.g. with 'pybind11>=2.12'.
+
+            If you are a user of the module, the easiest solution will be to
+            downgrade to 'numpy<2' or try to upgrade the affected module.
+            We expect that some modules will need time to support NumPy 2.
+
+            """)
+        tb_msg = "Traceback (most recent call last):"
+        for line in traceback.format_stack()[:-1]:
+            if "frozen importlib" in line:
+                continue
+            tb_msg += line
+
+        # Also print the message (with traceback).  This is because old versions
+        # of NumPy unfortunately set up the import to replace (and hide) the
+        # error.  The traceback shouldn't be needed, but e.g. pytest plugins
+        # seem to swallow it and we should be failing anyway...
+        sys.stderr.write(msg + tb_msg)
+        raise ImportError(msg)
+
+    ret = getattr(_multiarray_umath, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            "module 'numpy.core._multiarray_umath' has no attribute "
+            f"{attr_name}")
+    _raise_warning(attr_name, "_multiarray_umath")
+    return ret
+
+
+del _multiarray_umath, ufunc
diff --git a/venv/lib/python3.12/site-packages/numpy/core/_utils.py b/venv/lib/python3.12/site-packages/numpy/core/_utils.py
new file mode 100644
index 0000000000000000000000000000000000000000..ad076b0315f166c9aa8708fdb2235a988cdef75a
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/_utils.py
@@ -0,0 +1,21 @@
+import warnings
+
+
+def _raise_warning(attr: str, submodule: str = None) -> None:
+    new_module = "numpy._core"
+    old_module = "numpy.core"
+    if submodule is not None:
+        new_module = f"{new_module}.{submodule}"
+        old_module = f"{old_module}.{submodule}"
+    warnings.warn(
+        f"{old_module} is deprecated and has been renamed to {new_module}. "
+        "The numpy._core namespace contains private NumPy internals and its "
+        "use is discouraged, as NumPy internals can change without warning in "
+        "any release. In practice, most real-world usage of numpy.core is to "
+        "access functionality in the public NumPy API. If that is the case, "
+        "use the public NumPy API. If not, you are using NumPy internals. "
+        "If you would still like to access an internal attribute, "
+        f"use {new_module}.{attr}.",
+        DeprecationWarning, 
+        stacklevel=3
+    )
diff --git a/venv/lib/python3.12/site-packages/numpy/core/arrayprint.py b/venv/lib/python3.12/site-packages/numpy/core/arrayprint.py
new file mode 100644
index 0000000000000000000000000000000000000000..4e746546acf0b4df905b0c1117bdd40f0033e615
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/arrayprint.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import arrayprint
+    from ._utils import _raise_warning
+    ret = getattr(arrayprint, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.arrayprint' has no attribute {attr_name}")
+    _raise_warning(attr_name, "arrayprint")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/defchararray.py b/venv/lib/python3.12/site-packages/numpy/core/defchararray.py
new file mode 100644
index 0000000000000000000000000000000000000000..ffab82acff5b1cd02858900a158ff57215b79d46
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/defchararray.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import defchararray
+    from ._utils import _raise_warning
+    ret = getattr(defchararray, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.defchararray' has no attribute {attr_name}")
+    _raise_warning(attr_name, "defchararray")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/einsumfunc.py b/venv/lib/python3.12/site-packages/numpy/core/einsumfunc.py
new file mode 100644
index 0000000000000000000000000000000000000000..74aa410ff4b5ba9c58799bcfed5a1cfe41823358
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/einsumfunc.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import einsumfunc
+    from ._utils import _raise_warning
+    ret = getattr(einsumfunc, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.einsumfunc' has no attribute {attr_name}")
+    _raise_warning(attr_name, "einsumfunc")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/fromnumeric.py b/venv/lib/python3.12/site-packages/numpy/core/fromnumeric.py
new file mode 100644
index 0000000000000000000000000000000000000000..1ea11d799d6f7a1548f7241e041e2a2ea06d7736
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/fromnumeric.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import fromnumeric
+    from ._utils import _raise_warning
+    ret = getattr(fromnumeric, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.fromnumeric' has no attribute {attr_name}")
+    _raise_warning(attr_name, "fromnumeric")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/function_base.py b/venv/lib/python3.12/site-packages/numpy/core/function_base.py
new file mode 100644
index 0000000000000000000000000000000000000000..20e098b6fe4448d479928c9676aa99c8533453af
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/function_base.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import function_base
+    from ._utils import _raise_warning
+    ret = getattr(function_base, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.function_base' has no attribute {attr_name}")
+    _raise_warning(attr_name, "function_base")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/getlimits.py b/venv/lib/python3.12/site-packages/numpy/core/getlimits.py
new file mode 100644
index 0000000000000000000000000000000000000000..faa084ae77705613f4870dfdd9eab45532364b37
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/getlimits.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import getlimits
+    from ._utils import _raise_warning
+    ret = getattr(getlimits, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.getlimits' has no attribute {attr_name}")
+    _raise_warning(attr_name, "getlimits")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/multiarray.py b/venv/lib/python3.12/site-packages/numpy/core/multiarray.py
new file mode 100644
index 0000000000000000000000000000000000000000..0290c852a8ab06c68f05a469a11f861af56290e6
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/multiarray.py
@@ -0,0 +1,24 @@
+from numpy._core import multiarray
+
+# these must import without warning or error from numpy.core.multiarray to
+# support old pickle files
+for item in ["_reconstruct", "scalar"]:
+    globals()[item] = getattr(multiarray, item)
+
+# Pybind11 (in versions <= 2.11.1) imports _ARRAY_API from the multiarray
+# submodule as a part of NumPy initialization, therefore it must be importable
+# without a warning.
+_ARRAY_API = multiarray._ARRAY_API
+
+def __getattr__(attr_name):
+    from numpy._core import multiarray
+    from ._utils import _raise_warning
+    ret = getattr(multiarray, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.multiarray' has no attribute {attr_name}")
+    _raise_warning(attr_name, "multiarray")
+    return ret
+
+
+del multiarray
diff --git a/venv/lib/python3.12/site-packages/numpy/core/numeric.py b/venv/lib/python3.12/site-packages/numpy/core/numeric.py
new file mode 100644
index 0000000000000000000000000000000000000000..af0658d4fb66bea99d3fcfe4dccb273b299a54d0
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/numeric.py
@@ -0,0 +1,11 @@
+def __getattr__(attr_name):
+    from numpy._core import numeric
+    from ._utils import _raise_warning
+
+    sentinel = object()
+    ret = getattr(numeric, attr_name, sentinel)
+    if ret is sentinel:
+        raise AttributeError(
+            f"module 'numpy.core.numeric' has no attribute {attr_name}")
+    _raise_warning(attr_name, "numeric")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/numerictypes.py b/venv/lib/python3.12/site-packages/numpy/core/numerictypes.py
new file mode 100644
index 0000000000000000000000000000000000000000..0e887cbf30ad5bf27fd7025876bfb5854427efe0
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/numerictypes.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import numerictypes
+    from ._utils import _raise_warning
+    ret = getattr(numerictypes, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.numerictypes' has no attribute {attr_name}")
+    _raise_warning(attr_name, "numerictypes")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/overrides.py b/venv/lib/python3.12/site-packages/numpy/core/overrides.py
new file mode 100644
index 0000000000000000000000000000000000000000..3297999c5b01fcc89552421f7925594331a8d983
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/overrides.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import overrides
+    from ._utils import _raise_warning
+    ret = getattr(overrides, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.overrides' has no attribute {attr_name}")
+    _raise_warning(attr_name, "overrides")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/records.py b/venv/lib/python3.12/site-packages/numpy/core/records.py
new file mode 100644
index 0000000000000000000000000000000000000000..94c0d26926a00edb8de76937b927c7190515d904
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/records.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import records
+    from ._utils import _raise_warning
+    ret = getattr(records, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.records' has no attribute {attr_name}")
+    _raise_warning(attr_name, "records")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/shape_base.py b/venv/lib/python3.12/site-packages/numpy/core/shape_base.py
new file mode 100644
index 0000000000000000000000000000000000000000..10b8712c8b969360ed01c51140dbe84103f26bc3
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/shape_base.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import shape_base
+    from ._utils import _raise_warning
+    ret = getattr(shape_base, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.shape_base' has no attribute {attr_name}")
+    _raise_warning(attr_name, "shape_base")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/core/umath.py b/venv/lib/python3.12/site-packages/numpy/core/umath.py
new file mode 100644
index 0000000000000000000000000000000000000000..6ef031d7d62a5ce80c79b34d90d8ba76b110a208
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/core/umath.py
@@ -0,0 +1,9 @@
+def __getattr__(attr_name):
+    from numpy._core import umath
+    from ._utils import _raise_warning
+    ret = getattr(umath, attr_name, None)
+    if ret is None:
+        raise AttributeError(
+            f"module 'numpy.core.umath' has no attribute {attr_name}")
+    _raise_warning(attr_name, "umath")
+    return ret
diff --git a/venv/lib/python3.12/site-packages/numpy/ctypeslib.py b/venv/lib/python3.12/site-packages/numpy/ctypeslib.py
new file mode 100644
index 0000000000000000000000000000000000000000..8faf9415375b4098e4572283080d5c2a22e3ff1e
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/ctypeslib.py
@@ -0,0 +1,545 @@
+"""
+============================
+``ctypes`` Utility Functions
+============================
+
+See Also
+--------
+load_library : Load a C library.
+ndpointer : Array restype/argtype with verification.
+as_ctypes : Create a ctypes array from an ndarray.
+as_array : Create an ndarray from a ctypes array.
+
+References
+----------
+.. [1] "SciPy Cookbook: ctypes", https://scipy-cookbook.readthedocs.io/items/Ctypes.html
+
+Examples
+--------
+Load the C library:
+
+>>> _lib = np.ctypeslib.load_library('libmystuff', '.')     #doctest: +SKIP
+
+Our result type, an ndarray that must be of type double, be 1-dimensional
+and is C-contiguous in memory:
+
+>>> array_1d_double = np.ctypeslib.ndpointer(
+...                          dtype=np.double,
+...                          ndim=1, flags='CONTIGUOUS')    #doctest: +SKIP
+
+Our C-function typically takes an array and updates its values
+in-place.  For example::
+
+    void foo_func(double* x, int length)
+    {
+        int i;
+        for (i = 0; i < length; i++) {
+            x[i] = i*i;
+        }
+    }
+
+We wrap it using:
+
+>>> _lib.foo_func.restype = None                      #doctest: +SKIP
+>>> _lib.foo_func.argtypes = [array_1d_double, c_int] #doctest: +SKIP
+
+Then, we're ready to call ``foo_func``:
+
+>>> out = np.empty(15, dtype=np.double)
+>>> _lib.foo_func(out, len(out))                #doctest: +SKIP
+
+"""
+__all__ = ['load_library', 'ndpointer', 'c_intp', 'as_ctypes', 'as_array',
+           'as_ctypes_type']
+
+import os
+from numpy import (
+    integer, ndarray, dtype as _dtype, asarray, frombuffer
+)
+from numpy._core.multiarray import _flagdict, flagsobj
+
+try:
+    import ctypes
+except ImportError:
+    ctypes = None
+
+if ctypes is None:
+    def _dummy(*args, **kwds):
+        """
+        Dummy object that raises an ImportError if ctypes is not available.
+
+        Raises
+        ------
+        ImportError
+            If ctypes is not available.
+
+        """
+        raise ImportError("ctypes is not available.")
+    load_library = _dummy
+    as_ctypes = _dummy
+    as_array = _dummy
+    from numpy import intp as c_intp
+    _ndptr_base = object
+else:
+    import numpy._core._internal as nic
+    c_intp = nic._getintp_ctype()
+    del nic
+    _ndptr_base = ctypes.c_void_p
+
+    # Adapted from Albert Strasheim
+    def load_library(libname, loader_path):
+        """
+        It is possible to load a library using
+
+        >>> lib = ctypes.cdll[] # doctest: +SKIP
+
+        But there are cross-platform considerations, such as library file extensions,
+        plus the fact Windows will just load the first library it finds with that name.
+        NumPy supplies the load_library function as a convenience.
+
+        .. versionchanged:: 1.20.0
+            Allow libname and loader_path to take any
+            :term:`python:path-like object`.
+
+        Parameters
+        ----------
+        libname : path-like
+            Name of the library, which can have 'lib' as a prefix,
+            but without an extension.
+        loader_path : path-like
+            Where the library can be found.
+
+        Returns
+        -------
+        ctypes.cdll[libpath] : library object
+           A ctypes library object
+
+        Raises
+        ------
+        OSError
+            If there is no library with the expected extension, or the
+            library is defective and cannot be loaded.
+        """
+        # Convert path-like objects into strings
+        libname = os.fsdecode(libname)
+        loader_path = os.fsdecode(loader_path)
+
+        ext = os.path.splitext(libname)[1]
+        if not ext:
+            import sys
+            import sysconfig
+            # Try to load library with platform-specific name, otherwise
+            # default to libname.[so|dll|dylib].  Sometimes, these files are
+            # built erroneously on non-linux platforms.
+            base_ext = ".so"
+            if sys.platform.startswith("darwin"):
+                base_ext = ".dylib"
+            elif sys.platform.startswith("win"):
+                base_ext = ".dll"
+            libname_ext = [libname + base_ext]
+            so_ext = sysconfig.get_config_var("EXT_SUFFIX")
+            if not so_ext == base_ext:
+                libname_ext.insert(0, libname + so_ext)
+        else:
+            libname_ext = [libname]
+
+        loader_path = os.path.abspath(loader_path)
+        if not os.path.isdir(loader_path):
+            libdir = os.path.dirname(loader_path)
+        else:
+            libdir = loader_path
+
+        for ln in libname_ext:
+            libpath = os.path.join(libdir, ln)
+            if os.path.exists(libpath):
+                try:
+                    return ctypes.cdll[libpath]
+                except OSError:
+                    ## defective lib file
+                    raise
+        ## if no successful return in the libname_ext loop:
+        raise OSError("no file with expected extension")
+
+
+def _num_fromflags(flaglist):
+    num = 0
+    for val in flaglist:
+        num += _flagdict[val]
+    return num
+
+_flagnames = ['C_CONTIGUOUS', 'F_CONTIGUOUS', 'ALIGNED', 'WRITEABLE',
+              'OWNDATA', 'WRITEBACKIFCOPY']
+def _flags_fromnum(num):
+    res = []
+    for key in _flagnames:
+        value = _flagdict[key]
+        if (num & value):
+            res.append(key)
+    return res
+
+
+class _ndptr(_ndptr_base):
+    @classmethod
+    def from_param(cls, obj):
+        if not isinstance(obj, ndarray):
+            raise TypeError("argument must be an ndarray")
+        if cls._dtype_ is not None \
+               and obj.dtype != cls._dtype_:
+            raise TypeError("array must have data type %s" % cls._dtype_)
+        if cls._ndim_ is not None \
+               and obj.ndim != cls._ndim_:
+            raise TypeError("array must have %d dimension(s)" % cls._ndim_)
+        if cls._shape_ is not None \
+               and obj.shape != cls._shape_:
+            raise TypeError("array must have shape %s" % str(cls._shape_))
+        if cls._flags_ is not None \
+               and ((obj.flags.num & cls._flags_) != cls._flags_):
+            raise TypeError("array must have flags %s" %
+                    _flags_fromnum(cls._flags_))
+        return obj.ctypes
+
+
+class _concrete_ndptr(_ndptr):
+    """
+    Like _ndptr, but with `_shape_` and `_dtype_` specified.
+
+    Notably, this means the pointer has enough information to reconstruct
+    the array, which is not generally true.
+    """
+    def _check_retval_(self):
+        """
+        This method is called when this class is used as the .restype
+        attribute for a shared-library function, to automatically wrap the
+        pointer into an array.
+        """
+        return self.contents
+
+    @property
+    def contents(self):
+        """
+        Get an ndarray viewing the data pointed to by this pointer.
+
+        This mirrors the `contents` attribute of a normal ctypes pointer
+        """
+        full_dtype = _dtype((self._dtype_, self._shape_))
+        full_ctype = ctypes.c_char * full_dtype.itemsize
+        buffer = ctypes.cast(self, ctypes.POINTER(full_ctype)).contents
+        return frombuffer(buffer, dtype=full_dtype).squeeze(axis=0)
+
+
+# Factory for an array-checking class with from_param defined for
+#  use with ctypes argtypes mechanism
+_pointer_type_cache = {}
+def ndpointer(dtype=None, ndim=None, shape=None, flags=None):
+    """
+    Array-checking restype/argtypes.
+
+    An ndpointer instance is used to describe an ndarray in restypes
+    and argtypes specifications.  This approach is more flexible than
+    using, for example, ``POINTER(c_double)``, since several restrictions
+    can be specified, which are verified upon calling the ctypes function.
+    These include data type, number of dimensions, shape and flags.  If a
+    given array does not satisfy the specified restrictions,
+    a ``TypeError`` is raised.
+
+    Parameters
+    ----------
+    dtype : data-type, optional
+        Array data-type.
+    ndim : int, optional
+        Number of array dimensions.
+    shape : tuple of ints, optional
+        Array shape.
+    flags : str or tuple of str
+        Array flags; may be one or more of:
+
+        - C_CONTIGUOUS / C / CONTIGUOUS
+        - F_CONTIGUOUS / F / FORTRAN
+        - OWNDATA / O
+        - WRITEABLE / W
+        - ALIGNED / A
+        - WRITEBACKIFCOPY / X
+
+    Returns
+    -------
+    klass : ndpointer type object
+        A type object, which is an ``_ndtpr`` instance containing
+        dtype, ndim, shape and flags information.
+
+    Raises
+    ------
+    TypeError
+        If a given array does not satisfy the specified restrictions.
+
+    Examples
+    --------
+    >>> clib.somefunc.argtypes = [np.ctypeslib.ndpointer(dtype=np.float64,
+    ...                                                  ndim=1,
+    ...                                                  flags='C_CONTIGUOUS')]
+    ... #doctest: +SKIP
+    >>> clib.somefunc(np.array([1, 2, 3], dtype=np.float64))
+    ... #doctest: +SKIP
+
+    """
+
+    # normalize dtype to an Optional[dtype]
+    if dtype is not None:
+        dtype = _dtype(dtype)
+
+    # normalize flags to an Optional[int]
+    num = None
+    if flags is not None:
+        if isinstance(flags, str):
+            flags = flags.split(',')
+        elif isinstance(flags, (int, integer)):
+            num = flags
+            flags = _flags_fromnum(num)
+        elif isinstance(flags, flagsobj):
+            num = flags.num
+            flags = _flags_fromnum(num)
+        if num is None:
+            try:
+                flags = [x.strip().upper() for x in flags]
+            except Exception as e:
+                raise TypeError("invalid flags specification") from e
+            num = _num_fromflags(flags)
+
+    # normalize shape to an Optional[tuple]
+    if shape is not None:
+        try:
+            shape = tuple(shape)
+        except TypeError:
+            # single integer -> 1-tuple
+            shape = (shape,)
+
+    cache_key = (dtype, ndim, shape, num)
+
+    try:
+        return _pointer_type_cache[cache_key]
+    except KeyError:
+        pass
+
+    # produce a name for the new type
+    if dtype is None:
+        name = 'any'
+    elif dtype.names is not None:
+        name = str(id(dtype))
+    else:
+        name = dtype.str
+    if ndim is not None:
+        name += "_%dd" % ndim
+    if shape is not None:
+        name += "_"+"x".join(str(x) for x in shape)
+    if flags is not None:
+        name += "_"+"_".join(flags)
+
+    if dtype is not None and shape is not None:
+        base = _concrete_ndptr
+    else:
+        base = _ndptr
+
+    klass = type("ndpointer_%s"%name, (base,),
+                 {"_dtype_": dtype,
+                  "_shape_" : shape,
+                  "_ndim_" : ndim,
+                  "_flags_" : num})
+    _pointer_type_cache[cache_key] = klass
+    return klass
+
+
+if ctypes is not None:
+    def _ctype_ndarray(element_type, shape):
+        """ Create an ndarray of the given element type and shape """
+        for dim in shape[::-1]:
+            element_type = dim * element_type
+            # prevent the type name include np.ctypeslib
+            element_type.__module__ = None
+        return element_type
+
+
+    def _get_scalar_type_map():
+        """
+        Return a dictionary mapping native endian scalar dtype to ctypes types
+        """
+        ct = ctypes
+        simple_types = [
+            ct.c_byte, ct.c_short, ct.c_int, ct.c_long, ct.c_longlong,
+            ct.c_ubyte, ct.c_ushort, ct.c_uint, ct.c_ulong, ct.c_ulonglong,
+            ct.c_float, ct.c_double,
+            ct.c_bool,
+        ]
+        return {_dtype(ctype): ctype for ctype in simple_types}
+
+
+    _scalar_type_map = _get_scalar_type_map()
+
+
+    def _ctype_from_dtype_scalar(dtype):
+        # swapping twice ensure that `=` is promoted to <, >, or |
+        dtype_with_endian = dtype.newbyteorder('S').newbyteorder('S')
+        dtype_native = dtype.newbyteorder('=')
+        try:
+            ctype = _scalar_type_map[dtype_native]
+        except KeyError as e:
+            raise NotImplementedError(
+                "Converting {!r} to a ctypes type".format(dtype)
+            ) from None
+
+        if dtype_with_endian.byteorder == '>':
+            ctype = ctype.__ctype_be__
+        elif dtype_with_endian.byteorder == '<':
+            ctype = ctype.__ctype_le__
+
+        return ctype
+
+
+    def _ctype_from_dtype_subarray(dtype):
+        element_dtype, shape = dtype.subdtype
+        ctype = _ctype_from_dtype(element_dtype)
+        return _ctype_ndarray(ctype, shape)
+
+
+    def _ctype_from_dtype_structured(dtype):
+        # extract offsets of each field
+        field_data = []
+        for name in dtype.names:
+            field_dtype, offset = dtype.fields[name][:2]
+            field_data.append((offset, name, _ctype_from_dtype(field_dtype)))
+
+        # ctypes doesn't care about field order
+        field_data = sorted(field_data, key=lambda f: f[0])
+
+        if len(field_data) > 1 and all(offset == 0 for offset, name, ctype in field_data):
+            # union, if multiple fields all at address 0
+            size = 0
+            _fields_ = []
+            for offset, name, ctype in field_data:
+                _fields_.append((name, ctype))
+                size = max(size, ctypes.sizeof(ctype))
+
+            # pad to the right size
+            if dtype.itemsize != size:
+                _fields_.append(('', ctypes.c_char * dtype.itemsize))
+
+            # we inserted manual padding, so always `_pack_`
+            return type('union', (ctypes.Union,), dict(
+                _fields_=_fields_,
+                _pack_=1,
+                __module__=None,
+            ))
+        else:
+            last_offset = 0
+            _fields_ = []
+            for offset, name, ctype in field_data:
+                padding = offset - last_offset
+                if padding < 0:
+                    raise NotImplementedError("Overlapping fields")
+                if padding > 0:
+                    _fields_.append(('', ctypes.c_char * padding))
+
+                _fields_.append((name, ctype))
+                last_offset = offset + ctypes.sizeof(ctype)
+
+
+            padding = dtype.itemsize - last_offset
+            if padding > 0:
+                _fields_.append(('', ctypes.c_char * padding))
+
+            # we inserted manual padding, so always `_pack_`
+            return type('struct', (ctypes.Structure,), dict(
+                _fields_=_fields_,
+                _pack_=1,
+                __module__=None,
+            ))
+
+
+    def _ctype_from_dtype(dtype):
+        if dtype.fields is not None:
+            return _ctype_from_dtype_structured(dtype)
+        elif dtype.subdtype is not None:
+            return _ctype_from_dtype_subarray(dtype)
+        else:
+            return _ctype_from_dtype_scalar(dtype)
+
+
+    def as_ctypes_type(dtype):
+        r"""
+        Convert a dtype into a ctypes type.
+
+        Parameters
+        ----------
+        dtype : dtype
+            The dtype to convert
+
+        Returns
+        -------
+        ctype
+            A ctype scalar, union, array, or struct
+
+        Raises
+        ------
+        NotImplementedError
+            If the conversion is not possible
+
+        Notes
+        -----
+        This function does not losslessly round-trip in either direction.
+
+        ``np.dtype(as_ctypes_type(dt))`` will:
+
+        - insert padding fields
+        - reorder fields to be sorted by offset
+        - discard field titles
+
+        ``as_ctypes_type(np.dtype(ctype))`` will:
+
+        - discard the class names of `ctypes.Structure`\ s and
+          `ctypes.Union`\ s
+        - convert single-element `ctypes.Union`\ s into single-element
+          `ctypes.Structure`\ s
+        - insert padding fields
+
+        """
+        return _ctype_from_dtype(_dtype(dtype))
+
+
+    def as_array(obj, shape=None):
+        """
+        Create a numpy array from a ctypes array or POINTER.
+
+        The numpy array shares the memory with the ctypes object.
+
+        The shape parameter must be given if converting from a ctypes POINTER.
+        The shape parameter is ignored if converting from a ctypes array
+        """
+        if isinstance(obj, ctypes._Pointer):
+            # convert pointers to an array of the desired shape
+            if shape is None:
+                raise TypeError(
+                    'as_array() requires a shape argument when called on a '
+                    'pointer')
+            p_arr_type = ctypes.POINTER(_ctype_ndarray(obj._type_, shape))
+            obj = ctypes.cast(obj, p_arr_type).contents
+
+        return asarray(obj)
+
+
+    def as_ctypes(obj):
+        """Create and return a ctypes object from a numpy array.  Actually
+        anything that exposes the __array_interface__ is accepted."""
+        ai = obj.__array_interface__
+        if ai["strides"]:
+            raise TypeError("strided arrays not supported")
+        if ai["version"] != 3:
+            raise TypeError("only __array_interface__ version 3 supported")
+        addr, readonly = ai["data"]
+        if readonly:
+            raise TypeError("readonly arrays unsupported")
+
+        # can't use `_dtype((ai["typestr"], ai["shape"]))` here, as it overflows
+        # dtype.itemsize (gh-14214)
+        ctype_scalar = as_ctypes_type(ai["typestr"])
+        result_type = _ctype_ndarray(ctype_scalar, ai["shape"])
+        result = result_type.from_address(addr)
+        result.__keep = obj
+        return result
diff --git a/venv/lib/python3.12/site-packages/numpy/ctypeslib.pyi b/venv/lib/python3.12/site-packages/numpy/ctypeslib.pyi
new file mode 100644
index 0000000000000000000000000000000000000000..ce8854ca13c14620ae9222b5c9238019ad97023e
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/ctypeslib.pyi
@@ -0,0 +1,253 @@
+# NOTE: Numpy's mypy plugin is used for importing the correct
+# platform-specific `ctypes._SimpleCData[int]` sub-type
+from ctypes import c_int64 as _c_intp
+
+import os
+import ctypes
+from collections.abc import Iterable, Sequence
+from typing import (
+    Literal as L,
+    Any,
+    TypeVar,
+    Generic,
+    overload,
+    ClassVar,
+)
+
+import numpy as np
+from numpy import (
+    ndarray,
+    dtype,
+    generic,
+    byte,
+    short,
+    intc,
+    long,
+    longlong,
+    intp,
+    ubyte,
+    ushort,
+    uintc,
+    ulong,
+    ulonglong,
+    uintp,
+    single,
+    double,
+    longdouble,
+    void,
+)
+from numpy._core._internal import _ctypes
+from numpy._core.multiarray import flagsobj
+from numpy._typing import (
+    # Arrays
+    NDArray,
+    _ArrayLike,
+
+    # Shapes
+    _ShapeLike,
+
+    # DTypes
+    DTypeLike,
+    _DTypeLike,
+    _VoidDTypeLike,
+    _BoolCodes,
+    _UByteCodes,
+    _UShortCodes,
+    _UIntCCodes,
+    _ULongCodes,
+    _ULongLongCodes,
+    _ByteCodes,
+    _ShortCodes,
+    _IntCCodes,
+    _LongCodes,
+    _LongLongCodes,
+    _SingleCodes,
+    _DoubleCodes,
+    _LongDoubleCodes,
+)
+
+# TODO: Add a proper `_Shape` bound once we've got variadic typevars
+_DType = TypeVar("_DType", bound=dtype[Any])
+_DTypeOptional = TypeVar("_DTypeOptional", bound=None | dtype[Any])
+_SCT = TypeVar("_SCT", bound=generic)
+
+_FlagsKind = L[
+    'C_CONTIGUOUS', 'CONTIGUOUS', 'C',
+    'F_CONTIGUOUS', 'FORTRAN', 'F',
+    'ALIGNED', 'A',
+    'WRITEABLE', 'W',
+    'OWNDATA', 'O',
+    'WRITEBACKIFCOPY', 'X',
+]
+
+# TODO: Add a shape typevar once we have variadic typevars (PEP 646)
+class _ndptr(ctypes.c_void_p, Generic[_DTypeOptional]):
+    # In practice these 4 classvars are defined in the dynamic class
+    # returned by `ndpointer`
+    _dtype_: ClassVar[_DTypeOptional]
+    _shape_: ClassVar[None]
+    _ndim_: ClassVar[None | int]
+    _flags_: ClassVar[None | list[_FlagsKind]]
+
+    @overload
+    @classmethod
+    def from_param(cls: type[_ndptr[None]], obj: NDArray[Any]) -> _ctypes[Any]: ...
+    @overload
+    @classmethod
+    def from_param(cls: type[_ndptr[_DType]], obj: ndarray[Any, _DType]) -> _ctypes[Any]: ...
+
+class _concrete_ndptr(_ndptr[_DType]):
+    _dtype_: ClassVar[_DType]
+    _shape_: ClassVar[tuple[int, ...]]
+    @property
+    def contents(self) -> ndarray[Any, _DType]: ...
+
+def load_library(
+    libname: str | bytes | os.PathLike[str] | os.PathLike[bytes],
+    loader_path: str | bytes | os.PathLike[str] | os.PathLike[bytes],
+) -> ctypes.CDLL: ...
+
+__all__: list[str]
+
+c_intp = _c_intp
+
+@overload
+def ndpointer(
+    dtype: None = ...,
+    ndim: int = ...,
+    shape: None | _ShapeLike = ...,
+    flags: None | _FlagsKind | Iterable[_FlagsKind] | int | flagsobj = ...,
+) -> type[_ndptr[None]]: ...
+@overload
+def ndpointer(
+    dtype: _DTypeLike[_SCT],
+    ndim: int = ...,
+    *,
+    shape: _ShapeLike,
+    flags: None | _FlagsKind | Iterable[_FlagsKind] | int | flagsobj = ...,
+) -> type[_concrete_ndptr[dtype[_SCT]]]: ...
+@overload
+def ndpointer(
+    dtype: DTypeLike,
+    ndim: int = ...,
+    *,
+    shape: _ShapeLike,
+    flags: None | _FlagsKind | Iterable[_FlagsKind] | int | flagsobj = ...,
+) -> type[_concrete_ndptr[dtype[Any]]]: ...
+@overload
+def ndpointer(
+    dtype: _DTypeLike[_SCT],
+    ndim: int = ...,
+    shape: None = ...,
+    flags: None | _FlagsKind | Iterable[_FlagsKind] | int | flagsobj = ...,
+) -> type[_ndptr[dtype[_SCT]]]: ...
+@overload
+def ndpointer(
+    dtype: DTypeLike,
+    ndim: int = ...,
+    shape: None = ...,
+    flags: None | _FlagsKind | Iterable[_FlagsKind] | int | flagsobj = ...,
+) -> type[_ndptr[dtype[Any]]]: ...
+
+@overload
+def as_ctypes_type(dtype: _BoolCodes | _DTypeLike[np.bool] | type[ctypes.c_bool]) -> type[ctypes.c_bool]: ...
+@overload
+def as_ctypes_type(dtype: _ByteCodes | _DTypeLike[byte] | type[ctypes.c_byte]) -> type[ctypes.c_byte]: ...
+@overload
+def as_ctypes_type(dtype: _ShortCodes | _DTypeLike[short] | type[ctypes.c_short]) -> type[ctypes.c_short]: ...
+@overload
+def as_ctypes_type(dtype: _IntCCodes | _DTypeLike[intc] | type[ctypes.c_int]) -> type[ctypes.c_int]: ...
+@overload
+def as_ctypes_type(dtype: _LongCodes | _DTypeLike[long] | type[ctypes.c_long]) -> type[ctypes.c_long]: ...
+@overload
+def as_ctypes_type(dtype: type[int]) -> type[c_intp]: ...
+@overload
+def as_ctypes_type(dtype: _LongLongCodes | _DTypeLike[longlong] | type[ctypes.c_longlong]) -> type[ctypes.c_longlong]: ...
+@overload
+def as_ctypes_type(dtype: _UByteCodes | _DTypeLike[ubyte] | type[ctypes.c_ubyte]) -> type[ctypes.c_ubyte]: ...
+@overload
+def as_ctypes_type(dtype: _UShortCodes | _DTypeLike[ushort] | type[ctypes.c_ushort]) -> type[ctypes.c_ushort]: ...
+@overload
+def as_ctypes_type(dtype: _UIntCCodes | _DTypeLike[uintc] | type[ctypes.c_uint]) -> type[ctypes.c_uint]: ...
+@overload
+def as_ctypes_type(dtype: _ULongCodes | _DTypeLike[ulong] | type[ctypes.c_ulong]) -> type[ctypes.c_ulong]: ...
+@overload
+def as_ctypes_type(dtype: _ULongLongCodes | _DTypeLike[ulonglong] | type[ctypes.c_ulonglong]) -> type[ctypes.c_ulonglong]: ...
+@overload
+def as_ctypes_type(dtype: _SingleCodes | _DTypeLike[single] | type[ctypes.c_float]) -> type[ctypes.c_float]: ...
+@overload
+def as_ctypes_type(dtype: _DoubleCodes | _DTypeLike[double] | type[float | ctypes.c_double]) -> type[ctypes.c_double]: ...
+@overload
+def as_ctypes_type(dtype: _LongDoubleCodes | _DTypeLike[longdouble] | type[ctypes.c_longdouble]) -> type[ctypes.c_longdouble]: ...
+@overload
+def as_ctypes_type(dtype: _VoidDTypeLike) -> type[Any]: ...  # `ctypes.Union` or `ctypes.Structure`
+@overload
+def as_ctypes_type(dtype: str) -> type[Any]: ...
+
+@overload
+def as_array(obj: ctypes._PointerLike, shape: Sequence[int]) -> NDArray[Any]: ...
+@overload
+def as_array(obj: _ArrayLike[_SCT], shape: None | _ShapeLike = ...) -> NDArray[_SCT]: ...
+@overload
+def as_array(obj: object, shape: None | _ShapeLike = ...) -> NDArray[Any]: ...
+
+@overload
+def as_ctypes(obj: np.bool) -> ctypes.c_bool: ...
+@overload
+def as_ctypes(obj: byte) -> ctypes.c_byte: ...
+@overload
+def as_ctypes(obj: short) -> ctypes.c_short: ...
+@overload
+def as_ctypes(obj: intc) -> ctypes.c_int: ...
+@overload
+def as_ctypes(obj: long) -> ctypes.c_long: ...
+@overload
+def as_ctypes(obj: longlong) -> ctypes.c_longlong: ...
+@overload
+def as_ctypes(obj: ubyte) -> ctypes.c_ubyte: ...
+@overload
+def as_ctypes(obj: ushort) -> ctypes.c_ushort: ...
+@overload
+def as_ctypes(obj: uintc) -> ctypes.c_uint: ...
+@overload
+def as_ctypes(obj: ulong) -> ctypes.c_ulong: ...
+@overload
+def as_ctypes(obj: ulonglong) -> ctypes.c_ulonglong: ...
+@overload
+def as_ctypes(obj: single) -> ctypes.c_float: ...
+@overload
+def as_ctypes(obj: double) -> ctypes.c_double: ...
+@overload
+def as_ctypes(obj: longdouble) -> ctypes.c_longdouble: ...
+@overload
+def as_ctypes(obj: void) -> Any: ...  # `ctypes.Union` or `ctypes.Structure`
+@overload
+def as_ctypes(obj: NDArray[np.bool]) -> ctypes.Array[ctypes.c_bool]: ...
+@overload
+def as_ctypes(obj: NDArray[byte]) -> ctypes.Array[ctypes.c_byte]: ...
+@overload
+def as_ctypes(obj: NDArray[short]) -> ctypes.Array[ctypes.c_short]: ...
+@overload
+def as_ctypes(obj: NDArray[intc]) -> ctypes.Array[ctypes.c_int]: ...
+@overload
+def as_ctypes(obj: NDArray[long]) -> ctypes.Array[ctypes.c_long]: ...
+@overload
+def as_ctypes(obj: NDArray[longlong]) -> ctypes.Array[ctypes.c_longlong]: ...
+@overload
+def as_ctypes(obj: NDArray[ubyte]) -> ctypes.Array[ctypes.c_ubyte]: ...
+@overload
+def as_ctypes(obj: NDArray[ushort]) -> ctypes.Array[ctypes.c_ushort]: ...
+@overload
+def as_ctypes(obj: NDArray[uintc]) -> ctypes.Array[ctypes.c_uint]: ...
+@overload
+def as_ctypes(obj: NDArray[ulong]) -> ctypes.Array[ctypes.c_ulong]: ...
+@overload
+def as_ctypes(obj: NDArray[ulonglong]) -> ctypes.Array[ctypes.c_ulonglong]: ...
+@overload
+def as_ctypes(obj: NDArray[single]) -> ctypes.Array[ctypes.c_float]: ...
+@overload
+def as_ctypes(obj: NDArray[double]) -> ctypes.Array[ctypes.c_double]: ...
+@overload
+def as_ctypes(obj: NDArray[longdouble]) -> ctypes.Array[ctypes.c_longdouble]: ...
+@overload
+def as_ctypes(obj: NDArray[void]) -> ctypes.Array[Any]: ...  # `ctypes.Union` or `ctypes.Structure`
diff --git a/venv/lib/python3.12/site-packages/numpy/doc/__pycache__/ufuncs.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/doc/__pycache__/ufuncs.cpython-312.pyc
new file mode 100644
index 0000000000000000000000000000000000000000..9f872e4e1851cc1bc2d55a556af7bf786972016c
Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/doc/__pycache__/ufuncs.cpython-312.pyc differ
diff --git a/venv/lib/python3.12/site-packages/numpy/doc/ufuncs.py b/venv/lib/python3.12/site-packages/numpy/doc/ufuncs.py
new file mode 100644
index 0000000000000000000000000000000000000000..c99e9abc99a55a799899579fb0dec9ae4dccf54c
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/doc/ufuncs.py
@@ -0,0 +1,137 @@
+"""
+===================
+Universal Functions
+===================
+
+Ufuncs are, generally speaking, mathematical functions or operations that are
+applied element-by-element to the contents of an array. That is, the result
+in each output array element only depends on the value in the corresponding
+input array (or arrays) and on no other array elements. NumPy comes with a
+large suite of ufuncs, and scipy extends that suite substantially. The simplest
+example is the addition operator: ::
+
+ >>> np.array([0,2,3,4]) + np.array([1,1,-1,2])
+ array([1, 3, 2, 6])
+
+The ufunc module lists all the available ufuncs in numpy. Documentation on
+the specific ufuncs may be found in those modules. This documentation is
+intended to address the more general aspects of ufuncs common to most of
+them. All of the ufuncs that make use of Python operators (e.g., +, -, etc.)
+have equivalent functions defined (e.g. add() for +)
+
+Type coercion
+=============
+
+What happens when a binary operator (e.g., +,-,\\*,/, etc) deals with arrays of
+two different types? What is the type of the result? Typically, the result is
+the higher of the two types. For example: ::
+
+ float32 + float64 -> float64
+ int8 + int32 -> int32
+ int16 + float32 -> float32
+ float32 + complex64 -> complex64
+
+There are some less obvious cases generally involving mixes of types
+(e.g. uints, ints and floats) where equal bit sizes for each are not
+capable of saving all the information in a different type of equivalent
+bit size. Some examples are int32 vs float32 or uint32 vs int32.
+Generally, the result is the higher type of larger size than both
+(if available). So: ::
+
+ int32 + float32 -> float64
+ uint32 + int32 -> int64
+
+Finally, the type coercion behavior when expressions involve Python
+scalars is different than that seen for arrays. Since Python has a
+limited number of types, combining a Python int with a dtype=np.int8
+array does not coerce to the higher type but instead, the type of the
+array prevails. So the rules for Python scalars combined with arrays is
+that the result will be that of the array equivalent the Python scalar
+if the Python scalar is of a higher 'kind' than the array (e.g., float
+vs. int), otherwise the resultant type will be that of the array.
+For example: ::
+
+  Python int + int8 -> int8
+  Python float + int8 -> float64
+
+ufunc methods
+=============
+
+Binary ufuncs support 4 methods.
+
+**.reduce(arr)** applies the binary operator to elements of the array in
+  sequence. For example: ::
+
+ >>> np.add.reduce(np.arange(10))  # adds all elements of array
+ 45
+
+For multidimensional arrays, the first dimension is reduced by default: ::
+
+ >>> np.add.reduce(np.arange(10).reshape(2,5))
+     array([ 5,  7,  9, 11, 13])
+
+The axis keyword can be used to specify different axes to reduce: ::
+
+ >>> np.add.reduce(np.arange(10).reshape(2,5),axis=1)
+ array([10, 35])
+
+**.accumulate(arr)** applies the binary operator and generates an
+equivalently shaped array that includes the accumulated amount for each
+element of the array. A couple examples: ::
+
+ >>> np.add.accumulate(np.arange(10))
+ array([ 0,  1,  3,  6, 10, 15, 21, 28, 36, 45])
+ >>> np.multiply.accumulate(np.arange(1,9))
+ array([    1,     2,     6,    24,   120,   720,  5040, 40320])
+
+The behavior for multidimensional arrays is the same as for .reduce(),
+as is the use of the axis keyword).
+
+**.reduceat(arr,indices)** allows one to apply reduce to selected parts
+  of an array. It is a difficult method to understand. See the documentation
+  at:
+
+**.outer(arr1,arr2)** generates an outer operation on the two arrays arr1 and
+  arr2. It will work on multidimensional arrays (the shape of the result is
+  the concatenation of the two input shapes.: ::
+
+ >>> np.multiply.outer(np.arange(3),np.arange(4))
+ array([[0, 0, 0, 0],
+        [0, 1, 2, 3],
+        [0, 2, 4, 6]])
+
+Output arguments
+================
+
+All ufuncs accept an optional output array. The array must be of the expected
+output shape. Beware that if the type of the output array is of a different
+(and lower) type than the output result, the results may be silently truncated
+or otherwise corrupted in the downcast to the lower type. This usage is useful
+when one wants to avoid creating large temporary arrays and instead allows one
+to reuse the same array memory repeatedly (at the expense of not being able to
+use more convenient operator notation in expressions). Note that when the
+output argument is used, the ufunc still returns a reference to the result.
+
+ >>> x = np.arange(2)
+ >>> np.add(np.arange(2),np.arange(2.),x)
+ array([0, 2])
+ >>> x
+ array([0, 2])
+
+and & or as ufuncs
+==================
+
+Invariably people try to use the python 'and' and 'or' as logical operators
+(and quite understandably). But these operators do not behave as normal
+operators since Python treats these quite differently. They cannot be
+overloaded with array equivalents. Thus using 'and' or 'or' with an array
+results in an error. There are two alternatives:
+
+ 1) use the ufunc functions logical_and() and logical_or().
+ 2) use the bitwise operators & and \\|. The drawback of these is that if
+    the arguments to these operators are not boolean arrays, the result is
+    likely incorrect. On the other hand, most usages of logical_and and
+    logical_or are with boolean arrays. As long as one is careful, this is
+    a convenient way to apply these operators.
+
+"""
diff --git a/venv/lib/python3.12/site-packages/numpy/dtypes.py b/venv/lib/python3.12/site-packages/numpy/dtypes.py
new file mode 100644
index 0000000000000000000000000000000000000000..550a29e18f292e65600108804636b833c75d1be4
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/dtypes.py
@@ -0,0 +1,41 @@
+"""
+This module is home to specific dtypes related functionality and their classes.
+For more general information about dtypes, also see `numpy.dtype` and
+:ref:`arrays.dtypes`.
+
+Similar to the builtin ``types`` module, this submodule defines types (classes)
+that are not widely used directly.
+
+.. versionadded:: NumPy 1.25
+
+    The dtypes module is new in NumPy 1.25.  Previously DType classes were
+    only accessible indirectly.
+
+
+DType classes
+-------------
+
+The following are the classes of the corresponding NumPy dtype instances and
+NumPy scalar types.  The classes can be used in ``isinstance`` checks and can
+also be instantiated or used directly.  Direct use of these classes is not
+typical, since their scalar counterparts (e.g. ``np.float64``) or strings
+like ``"float64"`` can be used.
+"""
+
+# See doc/source/reference/routines.dtypes.rst for module-level docs
+
+__all__ = []
+
+
+def _add_dtype_helper(DType, alias):
+    # Function to add DTypes a bit more conveniently without channeling them
+    # through `numpy._core._multiarray_umath` namespace or similar.
+    from numpy import dtypes
+
+    setattr(dtypes, DType.__name__, DType)
+    __all__.append(DType.__name__)
+
+    if alias:
+        alias = alias.removeprefix("numpy.dtypes.")
+        setattr(dtypes, alias, DType)
+        __all__.append(alias)
diff --git a/venv/lib/python3.12/site-packages/numpy/dtypes.pyi b/venv/lib/python3.12/site-packages/numpy/dtypes.pyi
new file mode 100644
index 0000000000000000000000000000000000000000..cea64282252b9ac9a714a8f55c8014e4c6c5be3c
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/dtypes.pyi
@@ -0,0 +1,43 @@
+import numpy as np
+
+
+__all__: list[str]
+
+# Boolean:
+BoolDType = np.dtype[np.bool]
+# Sized integers:
+Int8DType = np.dtype[np.int8]
+UInt8DType = np.dtype[np.uint8]
+Int16DType = np.dtype[np.int16]
+UInt16DType = np.dtype[np.uint16]
+Int32DType = np.dtype[np.int32]
+UInt32DType = np.dtype[np.uint32]
+Int64DType = np.dtype[np.int64]
+UInt64DType = np.dtype[np.uint64]
+# Standard C-named version/alias:
+ByteDType = np.dtype[np.byte]
+UByteDType = np.dtype[np.ubyte]
+ShortDType = np.dtype[np.short]
+UShortDType = np.dtype[np.ushort]
+IntDType = np.dtype[np.intc]
+UIntDType = np.dtype[np.uintc]
+LongDType = np.dtype[np.long]
+ULongDType = np.dtype[np.ulong]
+LongLongDType = np.dtype[np.longlong]
+ULongLongDType = np.dtype[np.ulonglong]
+# Floats
+Float16DType = np.dtype[np.float16]
+Float32DType = np.dtype[np.float32]
+Float64DType = np.dtype[np.float64]
+LongDoubleDType = np.dtype[np.longdouble]
+# Complex:
+Complex64DType = np.dtype[np.complex64]
+Complex128DType = np.dtype[np.complex128]
+CLongDoubleDType = np.dtype[np.clongdouble]
+# Others:
+ObjectDType = np.dtype[np.object_]
+BytesDType = np.dtype[np.bytes_]
+StrDType = np.dtype[np.str_]
+VoidDType = np.dtype[np.void]
+DateTime64DType = np.dtype[np.datetime64]
+TimeDelta64DType = np.dtype[np.timedelta64]
diff --git a/venv/lib/python3.12/site-packages/numpy/exceptions.py b/venv/lib/python3.12/site-packages/numpy/exceptions.py
new file mode 100644
index 0000000000000000000000000000000000000000..b7df57c69fbd8fe59363b83cbde250a4e8823b59
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/exceptions.py
@@ -0,0 +1,243 @@
+"""
+Exceptions and Warnings (:mod:`numpy.exceptions`)
+=================================================
+
+General exceptions used by NumPy.  Note that some exceptions may be module
+specific, such as linear algebra errors.
+
+.. versionadded:: NumPy 1.25
+
+    The exceptions module is new in NumPy 1.25.  Older exceptions remain
+    available through the main NumPy namespace for compatibility.
+
+.. currentmodule:: numpy.exceptions
+
+Warnings
+--------
+.. autosummary::
+   :toctree: generated/
+
+   ComplexWarning             Given when converting complex to real.
+   VisibleDeprecationWarning  Same as a DeprecationWarning, but more visible.
+   RankWarning                Issued when the design matrix is rank deficient.
+
+Exceptions
+----------
+.. autosummary::
+   :toctree: generated/
+
+    AxisError          Given when an axis was invalid.
+    DTypePromotionError   Given when no common dtype could be found.
+    TooHardError       Error specific to `numpy.shares_memory`.
+
+"""
+
+
+__all__ = [
+    "ComplexWarning", "VisibleDeprecationWarning", "ModuleDeprecationWarning",
+    "TooHardError", "AxisError", "DTypePromotionError"]
+
+
+# Disallow reloading this module so as to preserve the identities of the
+# classes defined here.
+if '_is_loaded' in globals():
+    raise RuntimeError('Reloading numpy._globals is not allowed')
+_is_loaded = True
+
+
+class ComplexWarning(RuntimeWarning):
+    """
+    The warning raised when casting a complex dtype to a real dtype.
+
+    As implemented, casting a complex number to a real discards its imaginary
+    part, but this behavior may not be what the user actually wants.
+
+    """
+    pass
+
+
+class ModuleDeprecationWarning(DeprecationWarning):
+    """Module deprecation warning.
+
+    .. warning::
+
+        This warning should not be used, since nose testing is not relevant
+        anymore.
+
+    The nose tester turns ordinary Deprecation warnings into test failures.
+    That makes it hard to deprecate whole modules, because they get
+    imported by default. So this is a special Deprecation warning that the
+    nose tester will let pass without making tests fail.
+
+    """
+    pass
+
+
+class VisibleDeprecationWarning(UserWarning):
+    """Visible deprecation warning.
+
+    By default, python will not show deprecation warnings, so this class
+    can be used when a very visible warning is helpful, for example because
+    the usage is most likely a user bug.
+
+    """
+    pass
+
+
+class RankWarning(RuntimeWarning):
+    """Matrix rank warning.
+    
+    Issued by polynomial functions when the design matrix is rank deficient.
+    
+    """
+    pass
+
+
+# Exception used in shares_memory()
+class TooHardError(RuntimeError):
+    """max_work was exceeded.
+
+    This is raised whenever the maximum number of candidate solutions
+    to consider specified by the ``max_work`` parameter is exceeded.
+    Assigning a finite number to max_work may have caused the operation
+    to fail.
+
+    """
+    pass
+
+
+class AxisError(ValueError, IndexError):
+    """Axis supplied was invalid.
+
+    This is raised whenever an ``axis`` parameter is specified that is larger
+    than the number of array dimensions.
+    For compatibility with code written against older numpy versions, which
+    raised a mixture of :exc:`ValueError` and :exc:`IndexError` for this
+    situation, this exception subclasses both to ensure that
+    ``except ValueError`` and ``except IndexError`` statements continue
+    to catch ``AxisError``.
+
+    .. versionadded:: 1.13
+
+    Parameters
+    ----------
+    axis : int or str
+        The out of bounds axis or a custom exception message.
+        If an axis is provided, then `ndim` should be specified as well.
+    ndim : int, optional
+        The number of array dimensions.
+    msg_prefix : str, optional
+        A prefix for the exception message.
+
+    Attributes
+    ----------
+    axis : int, optional
+        The out of bounds axis or ``None`` if a custom exception
+        message was provided. This should be the axis as passed by
+        the user, before any normalization to resolve negative indices.
+
+        .. versionadded:: 1.22
+    ndim : int, optional
+        The number of array dimensions or ``None`` if a custom exception
+        message was provided.
+
+        .. versionadded:: 1.22
+
+
+    Examples
+    --------
+    >>> array_1d = np.arange(10)
+    >>> np.cumsum(array_1d, axis=1)
+    Traceback (most recent call last):
+      ...
+    numpy.exceptions.AxisError: axis 1 is out of bounds for array of dimension 1
+
+    Negative axes are preserved:
+
+    >>> np.cumsum(array_1d, axis=-2)
+    Traceback (most recent call last):
+      ...
+    numpy.exceptions.AxisError: axis -2 is out of bounds for array of dimension 1
+
+    The class constructor generally takes the axis and arrays'
+    dimensionality as arguments:
+
+    >>> print(np.exceptions.AxisError(2, 1, msg_prefix='error'))
+    error: axis 2 is out of bounds for array of dimension 1
+
+    Alternatively, a custom exception message can be passed:
+
+    >>> print(np.exceptions.AxisError('Custom error message'))
+    Custom error message
+
+    """
+
+    __slots__ = ("axis", "ndim", "_msg")
+
+    def __init__(self, axis, ndim=None, msg_prefix=None):
+        if ndim is msg_prefix is None:
+            # single-argument form: directly set the error message
+            self._msg = axis
+            self.axis = None
+            self.ndim = None
+        else:
+            self._msg = msg_prefix
+            self.axis = axis
+            self.ndim = ndim
+
+    def __str__(self):
+        axis = self.axis
+        ndim = self.ndim
+
+        if axis is ndim is None:
+            return self._msg
+        else:
+            msg = f"axis {axis} is out of bounds for array of dimension {ndim}"
+            if self._msg is not None:
+                msg = f"{self._msg}: {msg}"
+            return msg
+
+
+class DTypePromotionError(TypeError):
+    """Multiple DTypes could not be converted to a common one.
+
+    This exception derives from ``TypeError`` and is raised whenever dtypes
+    cannot be converted to a single common one.  This can be because they
+    are of a different category/class or incompatible instances of the same
+    one (see Examples).
+
+    Notes
+    -----
+    Many functions will use promotion to find the correct result and
+    implementation.  For these functions the error will typically be chained
+    with a more specific error indicating that no implementation was found
+    for the input dtypes.
+
+    Typically promotion should be considered "invalid" between the dtypes of
+    two arrays when `arr1 == arr2` can safely return all ``False`` because the
+    dtypes are fundamentally different.
+
+    Examples
+    --------
+    Datetimes and complex numbers are incompatible classes and cannot be
+    promoted:
+
+    >>> np.result_type(np.dtype("M8[s]"), np.complex128)
+    DTypePromotionError: The DType  could not
+    be promoted by . This means that no common
+    DType exists for the given inputs. For example they cannot be stored in a
+    single array unless the dtype is `object`. The full list of DTypes is:
+    (, )
+
+    For example for structured dtypes, the structure can mismatch and the
+    same ``DTypePromotionError`` is given when two structured dtypes with
+    a mismatch in their number of fields is given:
+
+    >>> dtype1 = np.dtype([("field1", np.float64), ("field2", np.int64)])
+    >>> dtype2 = np.dtype([("field1", np.float64)])
+    >>> np.promote_types(dtype1, dtype2)
+    DTypePromotionError: field names `('field1', 'field2')` and `('field1',)`
+    mismatch.
+
+    """
+    pass
diff --git a/venv/lib/python3.12/site-packages/numpy/exceptions.pyi b/venv/lib/python3.12/site-packages/numpy/exceptions.pyi
new file mode 100644
index 0000000000000000000000000000000000000000..8a99713f7006f526256075f11ab1eeffc0db95bb
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/exceptions.pyi
@@ -0,0 +1,19 @@
+from typing import overload
+
+__all__: list[str]
+
+class ComplexWarning(RuntimeWarning): ...
+class ModuleDeprecationWarning(DeprecationWarning): ...
+class VisibleDeprecationWarning(UserWarning): ...
+class RankWarning(RuntimeWarning): ...
+class TooHardError(RuntimeError): ...
+class DTypePromotionError(TypeError): ...
+
+class AxisError(ValueError, IndexError):
+    axis: None | int
+    ndim: None | int
+    @overload
+    def __init__(self, axis: str, ndim: None = ..., msg_prefix: None = ...) -> None: ...
+    @overload
+    def __init__(self, axis: int, ndim: int, msg_prefix: None | str = ...) -> None: ...
+    def __str__(self) -> str: ...
diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/__init__.py b/venv/lib/python3.12/site-packages/numpy/f2py/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..dfb897671c3fdf3b49fe1deec1241952263b2ef1
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/__init__.py
@@ -0,0 +1,88 @@
+#!/usr/bin/env python3
+"""Fortran to Python Interface Generator.
+
+Copyright 1999 -- 2011 Pearu Peterson all rights reserved.
+Copyright 2011 -- present NumPy Developers.
+Permission to use, modify, and distribute this software is given under the terms
+of the NumPy License.
+
+NO WARRANTY IS EXPRESSED OR IMPLIED.  USE AT YOUR OWN RISK.
+"""
+__all__ = ['run_main', 'get_include']
+
+import sys
+import subprocess
+import os
+import warnings
+
+from numpy.exceptions import VisibleDeprecationWarning
+from . import f2py2e
+from . import diagnose
+
+run_main = f2py2e.run_main
+main = f2py2e.main
+
+
+def get_include():
+    """
+    Return the directory that contains the ``fortranobject.c`` and ``.h`` files.
+
+    .. note::
+
+        This function is not needed when building an extension with
+        `numpy.distutils` directly from ``.f`` and/or ``.pyf`` files
+        in one go.
+
+    Python extension modules built with f2py-generated code need to use
+    ``fortranobject.c`` as a source file, and include the ``fortranobject.h``
+    header. This function can be used to obtain the directory containing
+    both of these files.
+
+    Returns
+    -------
+    include_path : str
+        Absolute path to the directory containing ``fortranobject.c`` and
+        ``fortranobject.h``.
+
+    Notes
+    -----
+    .. versionadded:: 1.21.1
+
+    Unless the build system you are using has specific support for f2py,
+    building a Python extension using a ``.pyf`` signature file is a two-step
+    process. For a module ``mymod``:
+
+    * Step 1: run ``python -m numpy.f2py mymod.pyf --quiet``. This
+      generates ``mymodmodule.c`` and (if needed)
+      ``mymod-f2pywrappers.f`` files next to ``mymod.pyf``.
+    * Step 2: build your Python extension module. This requires the
+      following source files:
+
+      * ``mymodmodule.c``
+      * ``mymod-f2pywrappers.f`` (if it was generated in Step 1)
+      * ``fortranobject.c``
+
+    See Also
+    --------
+    numpy.get_include : function that returns the numpy include directory
+
+    """
+    return os.path.join(os.path.dirname(__file__), 'src')
+
+
+def __getattr__(attr):
+
+    # Avoid importing things that aren't needed for building
+    # which might import the main numpy module
+    if attr == "test":
+        from numpy._pytesttester import PytestTester
+        test = PytestTester(__name__)
+        return test
+
+    else:
+        raise AttributeError("module {!r} has no attribute "
+                              "{!r}".format(__name__, attr))
+
+
+def __dir__():
+    return list(globals().keys() | {"test"})
diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/__init__.pyi b/venv/lib/python3.12/site-packages/numpy/f2py/__init__.pyi
new file mode 100644
index 0000000000000000000000000000000000000000..81b6a24f39ec37ba45055d8fefa819e816a61b8d
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/__init__.pyi
@@ -0,0 +1,42 @@
+import os
+import subprocess
+from collections.abc import Iterable
+from typing import Literal as L, Any, overload, TypedDict
+
+from numpy._pytesttester import PytestTester
+
+class _F2PyDictBase(TypedDict):
+    csrc: list[str]
+    h: list[str]
+
+class _F2PyDict(_F2PyDictBase, total=False):
+    fsrc: list[str]
+    ltx: list[str]
+
+__all__: list[str]
+test: PytestTester
+
+def run_main(comline_list: Iterable[str]) -> dict[str, _F2PyDict]: ...
+
+@overload
+def compile(  # type: ignore[misc]
+    source: str | bytes,
+    modulename: str = ...,
+    extra_args: str | list[str] = ...,
+    verbose: bool = ...,
+    source_fn: None | str | bytes | os.PathLike[Any] = ...,
+    extension: L[".f", ".f90"] = ...,
+    full_output: L[False] = ...,
+) -> int: ...
+@overload
+def compile(
+    source: str | bytes,
+    modulename: str = ...,
+    extra_args: str | list[str] = ...,
+    verbose: bool = ...,
+    source_fn: None | str | bytes | os.PathLike[Any] = ...,
+    extension: L[".f", ".f90"] = ...,
+    full_output: L[True] = ...,
+) -> subprocess.CompletedProcess[bytes]: ...
+
+def get_include() -> str: ...
diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/__main__.py b/venv/lib/python3.12/site-packages/numpy/f2py/__main__.py
new file mode 100644
index 0000000000000000000000000000000000000000..936a753a2796896667aa782277be41b40af061d3
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/__main__.py
@@ -0,0 +1,5 @@
+# See:
+# https://web.archive.org/web/20140822061353/http://cens.ioc.ee/projects/f2py2e
+from numpy.f2py.f2py2e import main
+
+main()
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+size 150669
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diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/__version__.py b/venv/lib/python3.12/site-packages/numpy/f2py/__version__.py
new file mode 100644
index 0000000000000000000000000000000000000000..e20d7c1dbb38807d248ff886e30425e7ff597299
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/__version__.py
@@ -0,0 +1 @@
+from numpy.version import version
diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/_backends/__init__.py b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/__init__.py
new file mode 100644
index 0000000000000000000000000000000000000000..e91393c14be39b20d5e94e262e91a05052681318
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/__init__.py
@@ -0,0 +1,9 @@
+def f2py_build_generator(name):
+    if name == "meson":
+        from ._meson import MesonBackend
+        return MesonBackend
+    elif name == "distutils":
+        from ._distutils import DistutilsBackend
+        return DistutilsBackend
+    else:
+        raise ValueError(f"Unknown backend: {name}")
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diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/_backends/__pycache__/_meson.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/__pycache__/_meson.cpython-312.pyc
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diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/_backends/_backend.py b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/_backend.py
new file mode 100644
index 0000000000000000000000000000000000000000..a7d43d2587b2f4886372f44c9bac7f5b840d7612
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/_backend.py
@@ -0,0 +1,46 @@
+from __future__ import annotations
+
+from abc import ABC, abstractmethod
+
+
+class Backend(ABC):
+    def __init__(
+        self,
+        modulename,
+        sources,
+        extra_objects,
+        build_dir,
+        include_dirs,
+        library_dirs,
+        libraries,
+        define_macros,
+        undef_macros,
+        f2py_flags,
+        sysinfo_flags,
+        fc_flags,
+        flib_flags,
+        setup_flags,
+        remove_build_dir,
+        extra_dat,
+    ):
+        self.modulename = modulename
+        self.sources = sources
+        self.extra_objects = extra_objects
+        self.build_dir = build_dir
+        self.include_dirs = include_dirs
+        self.library_dirs = library_dirs
+        self.libraries = libraries
+        self.define_macros = define_macros
+        self.undef_macros = undef_macros
+        self.f2py_flags = f2py_flags
+        self.sysinfo_flags = sysinfo_flags
+        self.fc_flags = fc_flags
+        self.flib_flags = flib_flags
+        self.setup_flags = setup_flags
+        self.remove_build_dir = remove_build_dir
+        self.extra_dat = extra_dat
+
+    @abstractmethod
+    def compile(self) -> None:
+        """Compile the wrapper."""
+        pass
diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/_backends/_distutils.py b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/_distutils.py
new file mode 100644
index 0000000000000000000000000000000000000000..f2436f86a7e6b050e1ebb3aa5dd51431aab8c4d5
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/_distutils.py
@@ -0,0 +1,75 @@
+from ._backend import Backend
+
+from numpy.distutils.core import setup, Extension
+from numpy.distutils.system_info import get_info
+from numpy.distutils.misc_util import dict_append
+from numpy.exceptions import VisibleDeprecationWarning
+import os
+import sys
+import shutil
+import warnings
+
+
+class DistutilsBackend(Backend):
+    def __init__(sef, *args, **kwargs):
+        warnings.warn(
+            "\ndistutils has been deprecated since NumPy 1.26.x\n"
+            "Use the Meson backend instead, or generate wrappers"
+            " without -c and use a custom build script",
+            VisibleDeprecationWarning,
+            stacklevel=2,
+        )
+        super().__init__(*args, **kwargs)
+
+    def compile(self):
+        num_info = {}
+        if num_info:
+            self.include_dirs.extend(num_info.get("include_dirs", []))
+        ext_args = {
+            "name": self.modulename,
+            "sources": self.sources,
+            "include_dirs": self.include_dirs,
+            "library_dirs": self.library_dirs,
+            "libraries": self.libraries,
+            "define_macros": self.define_macros,
+            "undef_macros": self.undef_macros,
+            "extra_objects": self.extra_objects,
+            "f2py_options": self.f2py_flags,
+        }
+
+        if self.sysinfo_flags:
+            for n in self.sysinfo_flags:
+                i = get_info(n)
+                if not i:
+                    print(
+                        f"No {repr(n)} resources found"
+                        "in system (try `f2py --help-link`)"
+                    )
+                dict_append(ext_args, **i)
+
+        ext = Extension(**ext_args)
+
+        sys.argv = [sys.argv[0]] + self.setup_flags
+        sys.argv.extend(
+            [
+                "build",
+                "--build-temp",
+                self.build_dir,
+                "--build-base",
+                self.build_dir,
+                "--build-platlib",
+                ".",
+                "--disable-optimization",
+            ]
+        )
+
+        if self.fc_flags:
+            sys.argv.extend(["config_fc"] + self.fc_flags)
+        if self.flib_flags:
+            sys.argv.extend(["build_ext"] + self.flib_flags)
+
+        setup(ext_modules=[ext])
+
+        if self.remove_build_dir and os.path.exists(self.build_dir):
+            print(f"Removing build directory {self.build_dir}")
+            shutil.rmtree(self.build_dir)
diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/_backends/_meson.py b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/_meson.py
new file mode 100644
index 0000000000000000000000000000000000000000..b438ed22343327887bbd368b84a1139d902ec40f
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/_meson.py
@@ -0,0 +1,234 @@
+from __future__ import annotations
+
+import os
+import errno
+import shutil
+import subprocess
+import sys
+import re
+from pathlib import Path
+
+from ._backend import Backend
+from string import Template
+from itertools import chain
+
+import warnings
+
+
+class MesonTemplate:
+    """Template meson build file generation class."""
+
+    def __init__(
+        self,
+        modulename: str,
+        sources: list[Path],
+        deps: list[str],
+        libraries: list[str],
+        library_dirs: list[Path],
+        include_dirs: list[Path],
+        object_files: list[Path],
+        linker_args: list[str],
+        fortran_args: list[str],
+        build_type: str,
+        python_exe: str,
+    ):
+        self.modulename = modulename
+        self.build_template_path = (
+            Path(__file__).parent.absolute() / "meson.build.template"
+        )
+        self.sources = sources
+        self.deps = deps
+        self.libraries = libraries
+        self.library_dirs = library_dirs
+        if include_dirs is not None:
+            self.include_dirs = include_dirs
+        else:
+            self.include_dirs = []
+        self.substitutions = {}
+        self.objects = object_files
+        # Convert args to '' wrapped variant for meson
+        self.fortran_args = [
+            f"'{x}'" if not (x.startswith("'") and x.endswith("'")) else x
+            for x in fortran_args
+        ]
+        self.pipeline = [
+            self.initialize_template,
+            self.sources_substitution,
+            self.deps_substitution,
+            self.include_substitution,
+            self.libraries_substitution,
+            self.fortran_args_substitution,
+        ]
+        self.build_type = build_type
+        self.python_exe = python_exe
+        self.indent = " " * 21
+
+    def meson_build_template(self) -> str:
+        if not self.build_template_path.is_file():
+            raise FileNotFoundError(
+                errno.ENOENT,
+                "Meson build template"
+                f" {self.build_template_path.absolute()}"
+                " does not exist.",
+            )
+        return self.build_template_path.read_text()
+
+    def initialize_template(self) -> None:
+        self.substitutions["modulename"] = self.modulename
+        self.substitutions["buildtype"] = self.build_type
+        self.substitutions["python"] = self.python_exe
+
+    def sources_substitution(self) -> None:
+        self.substitutions["source_list"] = ",\n".join(
+            [f"{self.indent}'''{source}'''," for source in self.sources]
+        )
+
+    def deps_substitution(self) -> None:
+        self.substitutions["dep_list"] = f",\n{self.indent}".join(
+            [f"{self.indent}dependency('{dep}')," for dep in self.deps]
+        )
+
+    def libraries_substitution(self) -> None:
+        self.substitutions["lib_dir_declarations"] = "\n".join(
+            [
+                f"lib_dir_{i} = declare_dependency(link_args : ['''-L{lib_dir}'''])"
+                for i, lib_dir in enumerate(self.library_dirs)
+            ]
+        )
+
+        self.substitutions["lib_declarations"] = "\n".join(
+            [
+                f"{lib.replace('.','_')} = declare_dependency(link_args : ['-l{lib}'])"
+                for lib in self.libraries
+            ]
+        )
+
+        self.substitutions["lib_list"] = f"\n{self.indent}".join(
+            [f"{self.indent}{lib.replace('.','_')}," for lib in self.libraries]
+        )
+        self.substitutions["lib_dir_list"] = f"\n{self.indent}".join(
+            [f"{self.indent}lib_dir_{i}," for i in range(len(self.library_dirs))]
+        )
+
+    def include_substitution(self) -> None:
+        self.substitutions["inc_list"] = f",\n{self.indent}".join(
+            [f"{self.indent}'''{inc}'''," for inc in self.include_dirs]
+        )
+
+    def fortran_args_substitution(self) -> None:
+        if self.fortran_args:
+            self.substitutions["fortran_args"] = (
+                f"{self.indent}fortran_args: [{', '.join([arg for arg in self.fortran_args])}],"
+            )
+        else:
+            self.substitutions["fortran_args"] = ""
+
+    def generate_meson_build(self):
+        for node in self.pipeline:
+            node()
+        template = Template(self.meson_build_template())
+        meson_build = template.substitute(self.substitutions)
+        meson_build = re.sub(r",,", ",", meson_build)
+        return meson_build
+
+
+class MesonBackend(Backend):
+    def __init__(self, *args, **kwargs):
+        super().__init__(*args, **kwargs)
+        self.dependencies = self.extra_dat.get("dependencies", [])
+        self.meson_build_dir = "bbdir"
+        self.build_type = (
+            "debug" if any("debug" in flag for flag in self.fc_flags) else "release"
+        )
+        self.fc_flags = _get_flags(self.fc_flags)
+
+    def _move_exec_to_root(self, build_dir: Path):
+        walk_dir = Path(build_dir) / self.meson_build_dir
+        path_objects = chain(
+            walk_dir.glob(f"{self.modulename}*.so"),
+            walk_dir.glob(f"{self.modulename}*.pyd"),
+        )
+        # Same behavior as distutils
+        # https://github.com/numpy/numpy/issues/24874#issuecomment-1835632293
+        for path_object in path_objects:
+            dest_path = Path.cwd() / path_object.name
+            if dest_path.exists():
+                dest_path.unlink()
+            shutil.copy2(path_object, dest_path)
+            os.remove(path_object)
+
+    def write_meson_build(self, build_dir: Path) -> None:
+        """Writes the meson build file at specified location"""
+        meson_template = MesonTemplate(
+            self.modulename,
+            self.sources,
+            self.dependencies,
+            self.libraries,
+            self.library_dirs,
+            self.include_dirs,
+            self.extra_objects,
+            self.flib_flags,
+            self.fc_flags,
+            self.build_type,
+            sys.executable,
+        )
+        src = meson_template.generate_meson_build()
+        Path(build_dir).mkdir(parents=True, exist_ok=True)
+        meson_build_file = Path(build_dir) / "meson.build"
+        meson_build_file.write_text(src)
+        return meson_build_file
+
+    def _run_subprocess_command(self, command, cwd):
+        subprocess.run(command, cwd=cwd, check=True)
+
+    def run_meson(self, build_dir: Path):
+        setup_command = ["meson", "setup", self.meson_build_dir]
+        self._run_subprocess_command(setup_command, build_dir)
+        compile_command = ["meson", "compile", "-C", self.meson_build_dir]
+        self._run_subprocess_command(compile_command, build_dir)
+
+    def compile(self) -> None:
+        self.sources = _prepare_sources(self.modulename, self.sources, self.build_dir)
+        self.write_meson_build(self.build_dir)
+        self.run_meson(self.build_dir)
+        self._move_exec_to_root(self.build_dir)
+
+
+def _prepare_sources(mname, sources, bdir):
+    extended_sources = sources.copy()
+    Path(bdir).mkdir(parents=True, exist_ok=True)
+    # Copy sources
+    for source in sources:
+        if Path(source).exists() and Path(source).is_file():
+            shutil.copy(source, bdir)
+    generated_sources = [
+        Path(f"{mname}module.c"),
+        Path(f"{mname}-f2pywrappers2.f90"),
+        Path(f"{mname}-f2pywrappers.f"),
+    ]
+    bdir = Path(bdir)
+    for generated_source in generated_sources:
+        if generated_source.exists():
+            shutil.copy(generated_source, bdir / generated_source.name)
+            extended_sources.append(generated_source.name)
+            generated_source.unlink()
+    extended_sources = [
+        Path(source).name
+        for source in extended_sources
+        if not Path(source).suffix == ".pyf"
+    ]
+    return extended_sources
+
+
+def _get_flags(fc_flags):
+    flag_values = []
+    flag_pattern = re.compile(r"--f(77|90)flags=(.*)")
+    for flag in fc_flags:
+        match_result = flag_pattern.match(flag)
+        if match_result:
+            values = match_result.group(2).strip().split()
+            values = [val.strip("'\"") for val in values]
+            flag_values.extend(values)
+    # Hacky way to preserve order of flags
+    unique_flags = list(dict.fromkeys(flag_values))
+    return unique_flags
diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/_backends/meson.build.template b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/meson.build.template
new file mode 100644
index 0000000000000000000000000000000000000000..fdcc1b17ce2118543266526c129d3a0a718eae63
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/_backends/meson.build.template
@@ -0,0 +1,55 @@
+project('${modulename}',
+        ['c', 'fortran'],
+        version : '0.1',
+        meson_version: '>= 1.1.0',
+        default_options : [
+                            'warning_level=1',
+                            'buildtype=${buildtype}'
+                          ])
+fc = meson.get_compiler('fortran')
+
+py = import('python').find_installation('''${python}''', pure: false)
+py_dep = py.dependency()
+
+incdir_numpy = run_command(py,
+  ['-c', 'import os; os.chdir(".."); import numpy; print(numpy.get_include())'],
+  check : true
+).stdout().strip()
+
+incdir_f2py = run_command(py,
+    ['-c', 'import os; os.chdir(".."); import numpy.f2py; print(numpy.f2py.get_include())'],
+    check : true
+).stdout().strip()
+
+inc_np = include_directories(incdir_numpy)
+np_dep = declare_dependency(include_directories: inc_np)
+
+incdir_f2py = incdir_numpy / '..' / '..' / 'f2py' / 'src'
+inc_f2py = include_directories(incdir_f2py)
+fortranobject_c = incdir_f2py / 'fortranobject.c'
+
+inc_np = include_directories(incdir_numpy, incdir_f2py)
+# gh-25000
+quadmath_dep = fc.find_library('quadmath', required: false)
+
+${lib_declarations}
+${lib_dir_declarations}
+
+py.extension_module('${modulename}',
+                     [
+${source_list},
+                     fortranobject_c
+                     ],
+                     include_directories: [
+                     inc_np,
+${inc_list}
+                     ],
+                     dependencies : [
+                     py_dep,
+                     quadmath_dep,
+${dep_list}
+${lib_list}
+${lib_dir_list}
+                     ],
+${fortran_args}
+                     install : true)
diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/_isocbind.py b/venv/lib/python3.12/site-packages/numpy/f2py/_isocbind.py
new file mode 100644
index 0000000000000000000000000000000000000000..3043c5d9163f7101d165ca08e33adf0970547612
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/_isocbind.py
@@ -0,0 +1,62 @@
+"""
+ISO_C_BINDING maps for f2py2e.
+Only required declarations/macros/functions will be used.
+
+Copyright 1999 -- 2011 Pearu Peterson all rights reserved.
+Copyright 2011 -- present NumPy Developers.
+Permission to use, modify, and distribute this software is given under the
+terms of the NumPy License.
+
+NO WARRANTY IS EXPRESSED OR IMPLIED.  USE AT YOUR OWN RISK.
+"""
+# These map to keys in c2py_map, via forced casting for now, see gh-25229
+iso_c_binding_map = {
+    'integer': {
+        'c_int': 'int',
+        'c_short': 'short',  # 'short' <=> 'int' for now
+        'c_long': 'long',  # 'long' <=> 'int' for now
+        'c_long_long': 'long_long',
+        'c_signed_char': 'signed_char',
+        'c_size_t': 'unsigned',  # size_t <=> 'unsigned' for now
+        'c_int8_t': 'signed_char',  # int8_t <=> 'signed_char' for now
+        'c_int16_t': 'short',  # int16_t <=> 'short' for now
+        'c_int32_t': 'int',  # int32_t <=> 'int' for now
+        'c_int64_t': 'long_long',
+        'c_int_least8_t': 'signed_char',  # int_least8_t <=> 'signed_char' for now
+        'c_int_least16_t': 'short',  # int_least16_t <=> 'short' for now
+        'c_int_least32_t': 'int',  # int_least32_t <=> 'int' for now
+        'c_int_least64_t': 'long_long',
+        'c_int_fast8_t': 'signed_char',  # int_fast8_t <=> 'signed_char' for now
+        'c_int_fast16_t': 'short',  # int_fast16_t <=> 'short' for now
+        'c_int_fast32_t': 'int',  # int_fast32_t <=> 'int' for now
+        'c_int_fast64_t': 'long_long',
+        'c_intmax_t': 'long_long',  # intmax_t <=> 'long_long' for now
+        'c_intptr_t': 'long',  # intptr_t <=> 'long' for now
+        'c_ptrdiff_t': 'long',  # ptrdiff_t <=> 'long' for now
+    },
+    'real': {
+        'c_float': 'float',
+        'c_double': 'double',
+        'c_long_double': 'long_double'
+    },
+    'complex': {
+        'c_float_complex': 'complex_float',
+        'c_double_complex': 'complex_double',
+        'c_long_double_complex': 'complex_long_double'
+    },
+    'logical': {
+        'c_bool': 'unsigned_char'  # _Bool <=> 'unsigned_char' for now
+    },
+    'character': {
+        'c_char': 'char'
+    }
+}
+
+# TODO: See gh-25229
+isoc_c2pycode_map = {}
+iso_c2py_map = {}
+
+isoc_kindmap = {}
+for fortran_type, c_type_dict in iso_c_binding_map.items():
+    for c_type in c_type_dict.keys():
+        isoc_kindmap[c_type] = fortran_type
diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/_src_pyf.py b/venv/lib/python3.12/site-packages/numpy/f2py/_src_pyf.py
new file mode 100644
index 0000000000000000000000000000000000000000..6247b95bfe4603e9b136ca0b8e0c2842d1c1d1cc
--- /dev/null
+++ b/venv/lib/python3.12/site-packages/numpy/f2py/_src_pyf.py
@@ -0,0 +1,239 @@
+import re
+
+# START OF CODE VENDORED FROM `numpy.distutils.from_template`
+#############################################################
+"""
+process_file(filename)
+
+  takes templated file .xxx.src and produces .xxx file where .xxx
+  is .pyf .f90 or .f using the following template rules:
+
+  '<..>' denotes a template.
+
+  All function and subroutine blocks in a source file with names that
+  contain '<..>' will be replicated according to the rules in '<..>'.
+
+  The number of comma-separated words in '<..>' will determine the number of
+  replicates.
+
+  '<..>' may have two different forms, named and short. For example,
+
+  named:
+    where anywhere inside a block '

' will be replaced with + 'd', 's', 'z', and 'c' for each replicate of the block. + + <_c> is already defined: <_c=s,d,c,z> + <_t> is already defined: <_t=real,double precision,complex,double complex> + + short: + , a short form of the named, useful when no

appears inside + a block. + + In general, '<..>' contains a comma separated list of arbitrary + expressions. If these expression must contain a comma|leftarrow|rightarrow, + then prepend the comma|leftarrow|rightarrow with a backslash. + + If an expression matches '\\' then it will be replaced + by -th expression. + + Note that all '<..>' forms in a block must have the same number of + comma-separated entries. + + Predefined named template rules: + + + + + +""" + +routine_start_re = re.compile(r'(\n|\A)(( (\$|\*))|)\s*(subroutine|function)\b', re.I) +routine_end_re = re.compile(r'\n\s*end\s*(subroutine|function)\b.*(\n|\Z)', re.I) +function_start_re = re.compile(r'\n (\$|\*)\s*function\b', re.I) + +def parse_structure(astr): + """ Return a list of tuples for each function or subroutine each + tuple is the start and end of a subroutine or function to be + expanded. + """ + + spanlist = [] + ind = 0 + while True: + m = routine_start_re.search(astr, ind) + if m is None: + break + start = m.start() + if function_start_re.match(astr, start, m.end()): + while True: + i = astr.rfind('\n', ind, start) + if i==-1: + break + start = i + if astr[i:i+7]!='\n $': + break + start += 1 + m = routine_end_re.search(astr, m.end()) + ind = end = m and m.end()-1 or len(astr) + spanlist.append((start, end)) + return spanlist + +template_re = re.compile(r"<\s*(\w[\w\d]*)\s*>") +named_re = re.compile(r"<\s*(\w[\w\d]*)\s*=\s*(.*?)\s*>") +list_re = re.compile(r"<\s*((.*?))\s*>") + +def find_repl_patterns(astr): + reps = named_re.findall(astr) + names = {} + for rep in reps: + name = rep[0].strip() or unique_key(names) + repl = rep[1].replace(r'\,', '@comma@') + thelist = conv(repl) + names[name] = thelist + return names + +def find_and_remove_repl_patterns(astr): + names = find_repl_patterns(astr) + astr = re.subn(named_re, '', astr)[0] + return astr, names + +item_re = re.compile(r"\A\\(?P\d+)\Z") +def conv(astr): + b = astr.split(',') + l = [x.strip() for x in b] + for i in range(len(l)): + m = item_re.match(l[i]) + if m: + j = int(m.group('index')) + l[i] = l[j] + return ','.join(l) + +def unique_key(adict): + """ Obtain a unique key given a dictionary.""" + allkeys = list(adict.keys()) + done = False + n = 1 + while not done: + newkey = '__l%s' % (n) + if newkey in allkeys: + n += 1 + else: + done = True + return newkey + + +template_name_re = re.compile(r'\A\s*(\w[\w\d]*)\s*\Z') +def expand_sub(substr, names): + substr = substr.replace(r'\>', '@rightarrow@') + substr = substr.replace(r'\<', '@leftarrow@') + lnames = find_repl_patterns(substr) + substr = named_re.sub(r"<\1>", substr) # get rid of definition templates + + def listrepl(mobj): + thelist = conv(mobj.group(1).replace(r'\,', '@comma@')) + if template_name_re.match(thelist): + return "<%s>" % (thelist) + name = None + for key in lnames.keys(): # see if list is already in dictionary + if lnames[key] == thelist: + name = key + if name is None: # this list is not in the dictionary yet + name = unique_key(lnames) + lnames[name] = thelist + return "<%s>" % name + + substr = list_re.sub(listrepl, substr) # convert all lists to named templates + # newnames are constructed as needed + + numsubs = None + base_rule = None + rules = {} + for r in template_re.findall(substr): + if r not in rules: + thelist = lnames.get(r, names.get(r, None)) + if thelist is None: + raise ValueError('No replicates found for <%s>' % (r)) + if r not in names and not thelist.startswith('_'): + names[r] = thelist + rule = [i.replace('@comma@', ',') for i in thelist.split(',')] + num = len(rule) + + if numsubs is None: + numsubs = num + rules[r] = rule + base_rule = r + elif num == numsubs: + rules[r] = rule + else: + print("Mismatch in number of replacements (base <{}={}>) " + "for <{}={}>. Ignoring.".format(base_rule, ','.join(rules[base_rule]), r, thelist)) + if not rules: + return substr + + def namerepl(mobj): + name = mobj.group(1) + return rules.get(name, (k+1)*[name])[k] + + newstr = '' + for k in range(numsubs): + newstr += template_re.sub(namerepl, substr) + '\n\n' + + newstr = newstr.replace('@rightarrow@', '>') + newstr = newstr.replace('@leftarrow@', '<') + return newstr + +def process_str(allstr): + newstr = allstr + writestr = '' + + struct = parse_structure(newstr) + + oldend = 0 + names = {} + names.update(_special_names) + for sub in struct: + cleanedstr, defs = find_and_remove_repl_patterns(newstr[oldend:sub[0]]) + writestr += cleanedstr + names.update(defs) + writestr += expand_sub(newstr[sub[0]:sub[1]], names) + oldend = sub[1] + writestr += newstr[oldend:] + + return writestr + +include_src_re = re.compile(r"(\n|\A)\s*include\s*['\"](?P[\w\d./\\]+\.src)['\"]", re.I) + +def resolve_includes(source): + d = os.path.dirname(source) + with open(source) as fid: + lines = [] + for line in fid: + m = include_src_re.match(line) + if m: + fn = m.group('name') + if not os.path.isabs(fn): + fn = os.path.join(d, fn) + if os.path.isfile(fn): + lines.extend(resolve_includes(fn)) + else: + lines.append(line) + else: + lines.append(line) + return lines + +def process_file(source): + lines = resolve_includes(source) + return process_str(''.join(lines)) + +_special_names = find_repl_patterns(''' +<_c=s,d,c,z> +<_t=real,double precision,complex,double complex> + + + + + +''') + +# END OF CODE VENDORED FROM `numpy.distutils.from_template` +########################################################### diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/auxfuncs.py b/venv/lib/python3.12/site-packages/numpy/f2py/auxfuncs.py new file mode 100644 index 0000000000000000000000000000000000000000..42d563b81af2f7bcbf6ea31d07394256b476121b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/auxfuncs.py @@ -0,0 +1,988 @@ +""" +Auxiliary functions for f2py2e. + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy (BSD style) LICENSE. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +import pprint +import sys +import re +import types +from functools import reduce +from copy import deepcopy + +from . import __version__ +from . import cfuncs +from .cfuncs import errmess + +__all__ = [ + 'applyrules', 'debugcapi', 'dictappend', 'errmess', 'gentitle', + 'getargs2', 'getcallprotoargument', 'getcallstatement', + 'getfortranname', 'getpymethoddef', 'getrestdoc', 'getusercode', + 'getusercode1', 'getdimension', 'hasbody', 'hascallstatement', 'hascommon', + 'hasexternals', 'hasinitvalue', 'hasnote', 'hasresultnote', + 'isallocatable', 'isarray', 'isarrayofstrings', + 'ischaracter', 'ischaracterarray', 'ischaracter_or_characterarray', + 'iscomplex', + 'iscomplexarray', 'iscomplexfunction', 'iscomplexfunction_warn', + 'isdouble', 'isdummyroutine', 'isexternal', 'isfunction', + 'isfunction_wrap', 'isint1', 'isint1array', 'isinteger', 'isintent_aux', + 'isintent_c', 'isintent_callback', 'isintent_copy', 'isintent_dict', + 'isintent_hide', 'isintent_in', 'isintent_inout', 'isintent_inplace', + 'isintent_nothide', 'isintent_out', 'isintent_overwrite', 'islogical', + 'islogicalfunction', 'islong_complex', 'islong_double', + 'islong_doublefunction', 'islong_long', 'islong_longfunction', + 'ismodule', 'ismoduleroutine', 'isoptional', 'isprivate', 'isrequired', + 'isroutine', 'isscalar', 'issigned_long_longarray', 'isstring', + 'isstringarray', 'isstring_or_stringarray', 'isstringfunction', + 'issubroutine', 'get_f2py_modulename', + 'issubroutine_wrap', 'isthreadsafe', 'isunsigned', 'isunsigned_char', + 'isunsigned_chararray', 'isunsigned_long_long', + 'isunsigned_long_longarray', 'isunsigned_short', + 'isunsigned_shortarray', 'l_and', 'l_not', 'l_or', 'outmess', + 'replace', 'show', 'stripcomma', 'throw_error', 'isattr_value', + 'getuseblocks', 'process_f2cmap_dict' +] + + +f2py_version = __version__.version + + +show = pprint.pprint + +options = {} +debugoptions = [] +wrapfuncs = 1 + + +def outmess(t): + if options.get('verbose', 1): + sys.stdout.write(t) + + +def debugcapi(var): + return 'capi' in debugoptions + + +def _ischaracter(var): + return 'typespec' in var and var['typespec'] == 'character' and \ + not isexternal(var) + + +def _isstring(var): + return 'typespec' in var and var['typespec'] == 'character' and \ + not isexternal(var) + + +def ischaracter_or_characterarray(var): + return _ischaracter(var) and 'charselector' not in var + + +def ischaracter(var): + return ischaracter_or_characterarray(var) and not isarray(var) + + +def ischaracterarray(var): + return ischaracter_or_characterarray(var) and isarray(var) + + +def isstring_or_stringarray(var): + return _ischaracter(var) and 'charselector' in var + + +def isstring(var): + return isstring_or_stringarray(var) and not isarray(var) + + +def isstringarray(var): + return isstring_or_stringarray(var) and isarray(var) + + +def isarrayofstrings(var): # obsolete? + # leaving out '*' for now so that `character*(*) a(m)` and `character + # a(m,*)` are treated differently. Luckily `character**` is illegal. + return isstringarray(var) and var['dimension'][-1] == '(*)' + + +def isarray(var): + return 'dimension' in var and not isexternal(var) + + +def isscalar(var): + return not (isarray(var) or isstring(var) or isexternal(var)) + + +def iscomplex(var): + return isscalar(var) and \ + var.get('typespec') in ['complex', 'double complex'] + + +def islogical(var): + return isscalar(var) and var.get('typespec') == 'logical' + + +def isinteger(var): + return isscalar(var) and var.get('typespec') == 'integer' + + +def isreal(var): + return isscalar(var) and var.get('typespec') == 'real' + + +def get_kind(var): + try: + return var['kindselector']['*'] + except KeyError: + try: + return var['kindselector']['kind'] + except KeyError: + pass + + +def isint1(var): + return var.get('typespec') == 'integer' \ + and get_kind(var) == '1' and not isarray(var) + + +def islong_long(var): + if not isscalar(var): + return 0 + if var.get('typespec') not in ['integer', 'logical']: + return 0 + return get_kind(var) == '8' + + +def isunsigned_char(var): + if not isscalar(var): + return 0 + if var.get('typespec') != 'integer': + return 0 + return get_kind(var) == '-1' + + +def isunsigned_short(var): + if not isscalar(var): + return 0 + if var.get('typespec') != 'integer': + return 0 + return get_kind(var) == '-2' + + +def isunsigned(var): + if not isscalar(var): + return 0 + if var.get('typespec') != 'integer': + return 0 + return get_kind(var) == '-4' + + +def isunsigned_long_long(var): + if not isscalar(var): + return 0 + if var.get('typespec') != 'integer': + return 0 + return get_kind(var) == '-8' + + +def isdouble(var): + if not isscalar(var): + return 0 + if not var.get('typespec') == 'real': + return 0 + return get_kind(var) == '8' + + +def islong_double(var): + if not isscalar(var): + return 0 + if not var.get('typespec') == 'real': + return 0 + return get_kind(var) == '16' + + +def islong_complex(var): + if not iscomplex(var): + return 0 + return get_kind(var) == '32' + + +def iscomplexarray(var): + return isarray(var) and \ + var.get('typespec') in ['complex', 'double complex'] + + +def isint1array(var): + return isarray(var) and var.get('typespec') == 'integer' \ + and get_kind(var) == '1' + + +def isunsigned_chararray(var): + return isarray(var) and var.get('typespec') in ['integer', 'logical']\ + and get_kind(var) == '-1' + + +def isunsigned_shortarray(var): + return isarray(var) and var.get('typespec') in ['integer', 'logical']\ + and get_kind(var) == '-2' + + +def isunsignedarray(var): + return isarray(var) and var.get('typespec') in ['integer', 'logical']\ + and get_kind(var) == '-4' + + +def isunsigned_long_longarray(var): + return isarray(var) and var.get('typespec') in ['integer', 'logical']\ + and get_kind(var) == '-8' + + +def issigned_chararray(var): + return isarray(var) and var.get('typespec') in ['integer', 'logical']\ + and get_kind(var) == '1' + + +def issigned_shortarray(var): + return isarray(var) and var.get('typespec') in ['integer', 'logical']\ + and get_kind(var) == '2' + + +def issigned_array(var): + return isarray(var) and var.get('typespec') in ['integer', 'logical']\ + and get_kind(var) == '4' + + +def issigned_long_longarray(var): + return isarray(var) and var.get('typespec') in ['integer', 'logical']\ + and get_kind(var) == '8' + + +def isallocatable(var): + return 'attrspec' in var and 'allocatable' in var['attrspec'] + + +def ismutable(var): + return not ('dimension' not in var or isstring(var)) + + +def ismoduleroutine(rout): + return 'modulename' in rout + + +def ismodule(rout): + return 'block' in rout and 'module' == rout['block'] + + +def isfunction(rout): + return 'block' in rout and 'function' == rout['block'] + + +def isfunction_wrap(rout): + if isintent_c(rout): + return 0 + return wrapfuncs and isfunction(rout) and (not isexternal(rout)) + + +def issubroutine(rout): + return 'block' in rout and 'subroutine' == rout['block'] + + +def issubroutine_wrap(rout): + if isintent_c(rout): + return 0 + return issubroutine(rout) and hasassumedshape(rout) + +def isattr_value(var): + return 'value' in var.get('attrspec', []) + + +def hasassumedshape(rout): + if rout.get('hasassumedshape'): + return True + for a in rout['args']: + for d in rout['vars'].get(a, {}).get('dimension', []): + if d == ':': + rout['hasassumedshape'] = True + return True + return False + + +def requiresf90wrapper(rout): + return ismoduleroutine(rout) or hasassumedshape(rout) + + +def isroutine(rout): + return isfunction(rout) or issubroutine(rout) + + +def islogicalfunction(rout): + if not isfunction(rout): + return 0 + if 'result' in rout: + a = rout['result'] + else: + a = rout['name'] + if a in rout['vars']: + return islogical(rout['vars'][a]) + return 0 + + +def islong_longfunction(rout): + if not isfunction(rout): + return 0 + if 'result' in rout: + a = rout['result'] + else: + a = rout['name'] + if a in rout['vars']: + return islong_long(rout['vars'][a]) + return 0 + + +def islong_doublefunction(rout): + if not isfunction(rout): + return 0 + if 'result' in rout: + a = rout['result'] + else: + a = rout['name'] + if a in rout['vars']: + return islong_double(rout['vars'][a]) + return 0 + + +def iscomplexfunction(rout): + if not isfunction(rout): + return 0 + if 'result' in rout: + a = rout['result'] + else: + a = rout['name'] + if a in rout['vars']: + return iscomplex(rout['vars'][a]) + return 0 + + +def iscomplexfunction_warn(rout): + if iscomplexfunction(rout): + outmess("""\ + ************************************************************** + Warning: code with a function returning complex value + may not work correctly with your Fortran compiler. + When using GNU gcc/g77 compilers, codes should work + correctly for callbacks with: + f2py -c -DF2PY_CB_RETURNCOMPLEX + **************************************************************\n""") + return 1 + return 0 + + +def isstringfunction(rout): + if not isfunction(rout): + return 0 + if 'result' in rout: + a = rout['result'] + else: + a = rout['name'] + if a in rout['vars']: + return isstring(rout['vars'][a]) + return 0 + + +def hasexternals(rout): + return 'externals' in rout and rout['externals'] + + +def isthreadsafe(rout): + return 'f2pyenhancements' in rout and \ + 'threadsafe' in rout['f2pyenhancements'] + + +def hasvariables(rout): + return 'vars' in rout and rout['vars'] + + +def isoptional(var): + return ('attrspec' in var and 'optional' in var['attrspec'] and + 'required' not in var['attrspec']) and isintent_nothide(var) + + +def isexternal(var): + return 'attrspec' in var and 'external' in var['attrspec'] + + +def getdimension(var): + dimpattern = r"\((.*?)\)" + if 'attrspec' in var.keys(): + if any('dimension' in s for s in var['attrspec']): + return [re.findall(dimpattern, v) for v in var['attrspec']][0] + + +def isrequired(var): + return not isoptional(var) and isintent_nothide(var) + + +def isintent_in(var): + if 'intent' not in var: + return 1 + if 'hide' in var['intent']: + return 0 + if 'inplace' in var['intent']: + return 0 + if 'in' in var['intent']: + return 1 + if 'out' in var['intent']: + return 0 + if 'inout' in var['intent']: + return 0 + if 'outin' in var['intent']: + return 0 + return 1 + + +def isintent_inout(var): + return ('intent' in var and ('inout' in var['intent'] or + 'outin' in var['intent']) and 'in' not in var['intent'] and + 'hide' not in var['intent'] and 'inplace' not in var['intent']) + + +def isintent_out(var): + return 'out' in var.get('intent', []) + + +def isintent_hide(var): + return ('intent' in var and ('hide' in var['intent'] or + ('out' in var['intent'] and 'in' not in var['intent'] and + (not l_or(isintent_inout, isintent_inplace)(var))))) + + +def isintent_nothide(var): + return not isintent_hide(var) + + +def isintent_c(var): + return 'c' in var.get('intent', []) + + +def isintent_cache(var): + return 'cache' in var.get('intent', []) + + +def isintent_copy(var): + return 'copy' in var.get('intent', []) + + +def isintent_overwrite(var): + return 'overwrite' in var.get('intent', []) + + +def isintent_callback(var): + return 'callback' in var.get('intent', []) + + +def isintent_inplace(var): + return 'inplace' in var.get('intent', []) + + +def isintent_aux(var): + return 'aux' in var.get('intent', []) + + +def isintent_aligned4(var): + return 'aligned4' in var.get('intent', []) + + +def isintent_aligned8(var): + return 'aligned8' in var.get('intent', []) + + +def isintent_aligned16(var): + return 'aligned16' in var.get('intent', []) + + +isintent_dict = {isintent_in: 'INTENT_IN', isintent_inout: 'INTENT_INOUT', + isintent_out: 'INTENT_OUT', isintent_hide: 'INTENT_HIDE', + isintent_cache: 'INTENT_CACHE', + isintent_c: 'INTENT_C', isoptional: 'OPTIONAL', + isintent_inplace: 'INTENT_INPLACE', + isintent_aligned4: 'INTENT_ALIGNED4', + isintent_aligned8: 'INTENT_ALIGNED8', + isintent_aligned16: 'INTENT_ALIGNED16', + } + + +def isprivate(var): + return 'attrspec' in var and 'private' in var['attrspec'] + + +def hasinitvalue(var): + return '=' in var + + +def hasinitvalueasstring(var): + if not hasinitvalue(var): + return 0 + return var['='][0] in ['"', "'"] + + +def hasnote(var): + return 'note' in var + + +def hasresultnote(rout): + if not isfunction(rout): + return 0 + if 'result' in rout: + a = rout['result'] + else: + a = rout['name'] + if a in rout['vars']: + return hasnote(rout['vars'][a]) + return 0 + + +def hascommon(rout): + return 'common' in rout + + +def containscommon(rout): + if hascommon(rout): + return 1 + if hasbody(rout): + for b in rout['body']: + if containscommon(b): + return 1 + return 0 + + +def containsmodule(block): + if ismodule(block): + return 1 + if not hasbody(block): + return 0 + for b in block['body']: + if containsmodule(b): + return 1 + return 0 + + +def hasbody(rout): + return 'body' in rout + + +def hascallstatement(rout): + return getcallstatement(rout) is not None + + +def istrue(var): + return 1 + + +def isfalse(var): + return 0 + + +class F2PYError(Exception): + pass + + +class throw_error: + + def __init__(self, mess): + self.mess = mess + + def __call__(self, var): + mess = '\n\n var = %s\n Message: %s\n' % (var, self.mess) + raise F2PYError(mess) + + +def l_and(*f): + l1, l2 = 'lambda v', [] + for i in range(len(f)): + l1 = '%s,f%d=f[%d]' % (l1, i, i) + l2.append('f%d(v)' % (i)) + return eval('%s:%s' % (l1, ' and '.join(l2))) + + +def l_or(*f): + l1, l2 = 'lambda v', [] + for i in range(len(f)): + l1 = '%s,f%d=f[%d]' % (l1, i, i) + l2.append('f%d(v)' % (i)) + return eval('%s:%s' % (l1, ' or '.join(l2))) + + +def l_not(f): + return eval('lambda v,f=f:not f(v)') + + +def isdummyroutine(rout): + try: + return rout['f2pyenhancements']['fortranname'] == '' + except KeyError: + return 0 + + +def getfortranname(rout): + try: + name = rout['f2pyenhancements']['fortranname'] + if name == '': + raise KeyError + if not name: + errmess('Failed to use fortranname from %s\n' % + (rout['f2pyenhancements'])) + raise KeyError + except KeyError: + name = rout['name'] + return name + + +def getmultilineblock(rout, blockname, comment=1, counter=0): + try: + r = rout['f2pyenhancements'].get(blockname) + except KeyError: + return + if not r: + return + if counter > 0 and isinstance(r, str): + return + if isinstance(r, list): + if counter >= len(r): + return + r = r[counter] + if r[:3] == "'''": + if comment: + r = '\t/* start ' + blockname + \ + ' multiline (' + repr(counter) + ') */\n' + r[3:] + else: + r = r[3:] + if r[-3:] == "'''": + if comment: + r = r[:-3] + '\n\t/* end multiline (' + repr(counter) + ')*/' + else: + r = r[:-3] + else: + errmess("%s multiline block should end with `'''`: %s\n" + % (blockname, repr(r))) + return r + + +def getcallstatement(rout): + return getmultilineblock(rout, 'callstatement') + + +def getcallprotoargument(rout, cb_map={}): + r = getmultilineblock(rout, 'callprotoargument', comment=0) + if r: + return r + if hascallstatement(rout): + outmess( + 'warning: callstatement is defined without callprotoargument\n') + return + from .capi_maps import getctype + arg_types, arg_types2 = [], [] + if l_and(isstringfunction, l_not(isfunction_wrap))(rout): + arg_types.extend(['char*', 'size_t']) + for n in rout['args']: + var = rout['vars'][n] + if isintent_callback(var): + continue + if n in cb_map: + ctype = cb_map[n] + '_typedef' + else: + ctype = getctype(var) + if l_and(isintent_c, l_or(isscalar, iscomplex))(var): + pass + elif isstring(var): + pass + else: + if not isattr_value(var): + ctype = ctype + '*' + if ((isstring(var) + or isarrayofstrings(var) # obsolete? + or isstringarray(var))): + arg_types2.append('size_t') + arg_types.append(ctype) + + proto_args = ','.join(arg_types + arg_types2) + if not proto_args: + proto_args = 'void' + return proto_args + + +def getusercode(rout): + return getmultilineblock(rout, 'usercode') + + +def getusercode1(rout): + return getmultilineblock(rout, 'usercode', counter=1) + + +def getpymethoddef(rout): + return getmultilineblock(rout, 'pymethoddef') + + +def getargs(rout): + sortargs, args = [], [] + if 'args' in rout: + args = rout['args'] + if 'sortvars' in rout: + for a in rout['sortvars']: + if a in args: + sortargs.append(a) + for a in args: + if a not in sortargs: + sortargs.append(a) + else: + sortargs = rout['args'] + return args, sortargs + + +def getargs2(rout): + sortargs, args = [], rout.get('args', []) + auxvars = [a for a in rout['vars'].keys() if isintent_aux(rout['vars'][a]) + and a not in args] + args = auxvars + args + if 'sortvars' in rout: + for a in rout['sortvars']: + if a in args: + sortargs.append(a) + for a in args: + if a not in sortargs: + sortargs.append(a) + else: + sortargs = auxvars + rout['args'] + return args, sortargs + + +def getrestdoc(rout): + if 'f2pymultilines' not in rout: + return None + k = None + if rout['block'] == 'python module': + k = rout['block'], rout['name'] + return rout['f2pymultilines'].get(k, None) + + +def gentitle(name): + ln = (80 - len(name) - 6) // 2 + return '/*%s %s %s*/' % (ln * '*', name, ln * '*') + + +def flatlist(lst): + if isinstance(lst, list): + return reduce(lambda x, y, f=flatlist: x + f(y), lst, []) + return [lst] + + +def stripcomma(s): + if s and s[-1] == ',': + return s[:-1] + return s + + +def replace(str, d, defaultsep=''): + if isinstance(d, list): + return [replace(str, _m, defaultsep) for _m in d] + if isinstance(str, list): + return [replace(_m, d, defaultsep) for _m in str] + for k in 2 * list(d.keys()): + if k == 'separatorsfor': + continue + if 'separatorsfor' in d and k in d['separatorsfor']: + sep = d['separatorsfor'][k] + else: + sep = defaultsep + if isinstance(d[k], list): + str = str.replace('#%s#' % (k), sep.join(flatlist(d[k]))) + else: + str = str.replace('#%s#' % (k), d[k]) + return str + + +def dictappend(rd, ar): + if isinstance(ar, list): + for a in ar: + rd = dictappend(rd, a) + return rd + for k in ar.keys(): + if k[0] == '_': + continue + if k in rd: + if isinstance(rd[k], str): + rd[k] = [rd[k]] + if isinstance(rd[k], list): + if isinstance(ar[k], list): + rd[k] = rd[k] + ar[k] + else: + rd[k].append(ar[k]) + elif isinstance(rd[k], dict): + if isinstance(ar[k], dict): + if k == 'separatorsfor': + for k1 in ar[k].keys(): + if k1 not in rd[k]: + rd[k][k1] = ar[k][k1] + else: + rd[k] = dictappend(rd[k], ar[k]) + else: + rd[k] = ar[k] + return rd + + +def applyrules(rules, d, var={}): + ret = {} + if isinstance(rules, list): + for r in rules: + rr = applyrules(r, d, var) + ret = dictappend(ret, rr) + if '_break' in rr: + break + return ret + if '_check' in rules and (not rules['_check'](var)): + return ret + if 'need' in rules: + res = applyrules({'needs': rules['need']}, d, var) + if 'needs' in res: + cfuncs.append_needs(res['needs']) + + for k in rules.keys(): + if k == 'separatorsfor': + ret[k] = rules[k] + continue + if isinstance(rules[k], str): + ret[k] = replace(rules[k], d) + elif isinstance(rules[k], list): + ret[k] = [] + for i in rules[k]: + ar = applyrules({k: i}, d, var) + if k in ar: + ret[k].append(ar[k]) + elif k[0] == '_': + continue + elif isinstance(rules[k], dict): + ret[k] = [] + for k1 in rules[k].keys(): + if isinstance(k1, types.FunctionType) and k1(var): + if isinstance(rules[k][k1], list): + for i in rules[k][k1]: + if isinstance(i, dict): + res = applyrules({'supertext': i}, d, var) + if 'supertext' in res: + i = res['supertext'] + else: + i = '' + ret[k].append(replace(i, d)) + else: + i = rules[k][k1] + if isinstance(i, dict): + res = applyrules({'supertext': i}, d) + if 'supertext' in res: + i = res['supertext'] + else: + i = '' + ret[k].append(replace(i, d)) + else: + errmess('applyrules: ignoring rule %s.\n' % repr(rules[k])) + if isinstance(ret[k], list): + if len(ret[k]) == 1: + ret[k] = ret[k][0] + if ret[k] == []: + del ret[k] + return ret + +_f2py_module_name_match = re.compile(r'\s*python\s*module\s*(?P[\w_]+)', + re.I).match +_f2py_user_module_name_match = re.compile(r'\s*python\s*module\s*(?P[\w_]*?' + r'__user__[\w_]*)', re.I).match + +def get_f2py_modulename(source): + name = None + with open(source) as f: + for line in f: + m = _f2py_module_name_match(line) + if m: + if _f2py_user_module_name_match(line): # skip *__user__* names + continue + name = m.group('name') + break + return name + +def getuseblocks(pymod): + all_uses = [] + for inner in pymod['body']: + for modblock in inner['body']: + if modblock.get('use'): + all_uses.extend([x for x in modblock.get("use").keys() if "__" not in x]) + return all_uses + +def process_f2cmap_dict(f2cmap_all, new_map, c2py_map, verbose = False): + """ + Update the Fortran-to-C type mapping dictionary with new mappings and + return a list of successfully mapped C types. + + This function integrates a new mapping dictionary into an existing + Fortran-to-C type mapping dictionary. It ensures that all keys are in + lowercase and validates new entries against a given C-to-Python mapping + dictionary. Redefinitions and invalid entries are reported with a warning. + + Parameters + ---------- + f2cmap_all : dict + The existing Fortran-to-C type mapping dictionary that will be updated. + It should be a dictionary of dictionaries where the main keys represent + Fortran types and the nested dictionaries map Fortran type specifiers + to corresponding C types. + + new_map : dict + A dictionary containing new type mappings to be added to `f2cmap_all`. + The structure should be similar to `f2cmap_all`, with keys representing + Fortran types and values being dictionaries of type specifiers and their + C type equivalents. + + c2py_map : dict + A dictionary used for validating the C types in `new_map`. It maps C + types to corresponding Python types and is used to ensure that the C + types specified in `new_map` are valid. + + verbose : boolean + A flag used to provide information about the types mapped + + Returns + ------- + tuple of (dict, list) + The updated Fortran-to-C type mapping dictionary and a list of + successfully mapped C types. + """ + f2cmap_mapped = [] + + new_map_lower = {} + for k, d1 in new_map.items(): + d1_lower = {k1.lower(): v1 for k1, v1 in d1.items()} + new_map_lower[k.lower()] = d1_lower + + for k, d1 in new_map_lower.items(): + if k not in f2cmap_all: + f2cmap_all[k] = {} + + for k1, v1 in d1.items(): + if v1 in c2py_map: + if k1 in f2cmap_all[k]: + outmess( + "\tWarning: redefinition of {'%s':{'%s':'%s'->'%s'}}\n" + % (k, k1, f2cmap_all[k][k1], v1) + ) + f2cmap_all[k][k1] = v1 + if verbose: + outmess('\tMapping "%s(kind=%s)" to "%s"\n' % (k, k1, v1)) + f2cmap_mapped.append(v1) + else: + if verbose: + errmess( + "\tIgnoring map {'%s':{'%s':'%s'}}: '%s' must be in %s\n" + % (k, k1, v1, v1, list(c2py_map.keys())) + ) + + return f2cmap_all, f2cmap_mapped diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/capi_maps.py b/venv/lib/python3.12/site-packages/numpy/f2py/capi_maps.py new file mode 100644 index 0000000000000000000000000000000000000000..fa477a5b9aca4873c269b7e628dc50f4d58251b0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/capi_maps.py @@ -0,0 +1,819 @@ +""" +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +from . import __version__ +f2py_version = __version__.version + +import copy +import re +import os +from .crackfortran import markoutercomma +from . import cb_rules +from ._isocbind import iso_c_binding_map, isoc_c2pycode_map, iso_c2py_map + +# The environment provided by auxfuncs.py is needed for some calls to eval. +# As the needed functions cannot be determined by static inspection of the +# code, it is safest to use import * pending a major refactoring of f2py. +from .auxfuncs import * + +__all__ = [ + 'getctype', 'getstrlength', 'getarrdims', 'getpydocsign', + 'getarrdocsign', 'getinit', 'sign2map', 'routsign2map', 'modsign2map', + 'cb_sign2map', 'cb_routsign2map', 'common_sign2map', 'process_f2cmap_dict' +] + + +depargs = [] +lcb_map = {} +lcb2_map = {} +# forced casting: mainly caused by the fact that Python or Numeric +# C/APIs do not support the corresponding C types. +c2py_map = {'double': 'float', + 'float': 'float', # forced casting + 'long_double': 'float', # forced casting + 'char': 'int', # forced casting + 'signed_char': 'int', # forced casting + 'unsigned_char': 'int', # forced casting + 'short': 'int', # forced casting + 'unsigned_short': 'int', # forced casting + 'int': 'int', # forced casting + 'long': 'int', + 'long_long': 'long', + 'unsigned': 'int', # forced casting + 'complex_float': 'complex', # forced casting + 'complex_double': 'complex', + 'complex_long_double': 'complex', # forced casting + 'string': 'string', + 'character': 'bytes', + } + +c2capi_map = {'double': 'NPY_DOUBLE', + 'float': 'NPY_FLOAT', + 'long_double': 'NPY_LONGDOUBLE', + 'char': 'NPY_BYTE', + 'unsigned_char': 'NPY_UBYTE', + 'signed_char': 'NPY_BYTE', + 'short': 'NPY_SHORT', + 'unsigned_short': 'NPY_USHORT', + 'int': 'NPY_INT', + 'unsigned': 'NPY_UINT', + 'long': 'NPY_LONG', + 'unsigned_long': 'NPY_ULONG', + 'long_long': 'NPY_LONGLONG', + 'unsigned_long_long': 'NPY_ULONGLONG', + 'complex_float': 'NPY_CFLOAT', + 'complex_double': 'NPY_CDOUBLE', + 'complex_long_double': 'NPY_CDOUBLE', + 'string': 'NPY_STRING', + 'character': 'NPY_STRING'} + +c2pycode_map = {'double': 'd', + 'float': 'f', + 'long_double': 'g', + 'char': 'b', + 'unsigned_char': 'B', + 'signed_char': 'b', + 'short': 'h', + 'unsigned_short': 'H', + 'int': 'i', + 'unsigned': 'I', + 'long': 'l', + 'unsigned_long': 'L', + 'long_long': 'q', + 'unsigned_long_long': 'Q', + 'complex_float': 'F', + 'complex_double': 'D', + 'complex_long_double': 'G', + 'string': 'S', + 'character': 'c'} + +# https://docs.python.org/3/c-api/arg.html#building-values +c2buildvalue_map = {'double': 'd', + 'float': 'f', + 'char': 'b', + 'signed_char': 'b', + 'short': 'h', + 'int': 'i', + 'long': 'l', + 'long_long': 'L', + 'complex_float': 'N', + 'complex_double': 'N', + 'complex_long_double': 'N', + 'string': 'y', + 'character': 'c'} + +f2cmap_all = {'real': {'': 'float', '4': 'float', '8': 'double', + '12': 'long_double', '16': 'long_double'}, + 'integer': {'': 'int', '1': 'signed_char', '2': 'short', + '4': 'int', '8': 'long_long', + '-1': 'unsigned_char', '-2': 'unsigned_short', + '-4': 'unsigned', '-8': 'unsigned_long_long'}, + 'complex': {'': 'complex_float', '8': 'complex_float', + '16': 'complex_double', '24': 'complex_long_double', + '32': 'complex_long_double'}, + 'complexkind': {'': 'complex_float', '4': 'complex_float', + '8': 'complex_double', '12': 'complex_long_double', + '16': 'complex_long_double'}, + 'logical': {'': 'int', '1': 'char', '2': 'short', '4': 'int', + '8': 'long_long'}, + 'double complex': {'': 'complex_double'}, + 'double precision': {'': 'double'}, + 'byte': {'': 'char'}, + } + +# Add ISO_C handling +c2pycode_map.update(isoc_c2pycode_map) +c2py_map.update(iso_c2py_map) +f2cmap_all, _ = process_f2cmap_dict(f2cmap_all, iso_c_binding_map, c2py_map) +# End ISO_C handling +f2cmap_default = copy.deepcopy(f2cmap_all) + +f2cmap_mapped = [] + +def load_f2cmap_file(f2cmap_file): + global f2cmap_all, f2cmap_mapped + + f2cmap_all = copy.deepcopy(f2cmap_default) + + if f2cmap_file is None: + # Default value + f2cmap_file = '.f2py_f2cmap' + if not os.path.isfile(f2cmap_file): + return + + # User defined additions to f2cmap_all. + # f2cmap_file must contain a dictionary of dictionaries, only. For + # example, {'real':{'low':'float'}} means that Fortran 'real(low)' is + # interpreted as C 'float'. This feature is useful for F90/95 users if + # they use PARAMETERS in type specifications. + try: + outmess('Reading f2cmap from {!r} ...\n'.format(f2cmap_file)) + with open(f2cmap_file) as f: + d = eval(f.read().lower(), {}, {}) + f2cmap_all, f2cmap_mapped = process_f2cmap_dict(f2cmap_all, d, c2py_map, True) + outmess('Successfully applied user defined f2cmap changes\n') + except Exception as msg: + errmess('Failed to apply user defined f2cmap changes: %s. Skipping.\n' % (msg)) + + +cformat_map = {'double': '%g', + 'float': '%g', + 'long_double': '%Lg', + 'char': '%d', + 'signed_char': '%d', + 'unsigned_char': '%hhu', + 'short': '%hd', + 'unsigned_short': '%hu', + 'int': '%d', + 'unsigned': '%u', + 'long': '%ld', + 'unsigned_long': '%lu', + 'long_long': '%ld', + 'complex_float': '(%g,%g)', + 'complex_double': '(%g,%g)', + 'complex_long_double': '(%Lg,%Lg)', + 'string': '\\"%s\\"', + 'character': "'%c'", + } + +# Auxiliary functions + + +def getctype(var): + """ + Determines C type + """ + ctype = 'void' + if isfunction(var): + if 'result' in var: + a = var['result'] + else: + a = var['name'] + if a in var['vars']: + return getctype(var['vars'][a]) + else: + errmess('getctype: function %s has no return value?!\n' % a) + elif issubroutine(var): + return ctype + elif ischaracter_or_characterarray(var): + return 'character' + elif isstring_or_stringarray(var): + return 'string' + elif 'typespec' in var and var['typespec'].lower() in f2cmap_all: + typespec = var['typespec'].lower() + f2cmap = f2cmap_all[typespec] + ctype = f2cmap[''] # default type + if 'kindselector' in var: + if '*' in var['kindselector']: + try: + ctype = f2cmap[var['kindselector']['*']] + except KeyError: + errmess('getctype: "%s %s %s" not supported.\n' % + (var['typespec'], '*', var['kindselector']['*'])) + elif 'kind' in var['kindselector']: + if typespec + 'kind' in f2cmap_all: + f2cmap = f2cmap_all[typespec + 'kind'] + try: + ctype = f2cmap[var['kindselector']['kind']] + except KeyError: + if typespec in f2cmap_all: + f2cmap = f2cmap_all[typespec] + try: + ctype = f2cmap[str(var['kindselector']['kind'])] + except KeyError: + errmess('getctype: "%s(kind=%s)" is mapped to C "%s" (to override define dict(%s = dict(%s="")) in %s/.f2py_f2cmap file).\n' + % (typespec, var['kindselector']['kind'], ctype, + typespec, var['kindselector']['kind'], os.getcwd())) + else: + if not isexternal(var): + errmess('getctype: No C-type found in "%s", assuming void.\n' % var) + return ctype + + +def f2cexpr(expr): + """Rewrite Fortran expression as f2py supported C expression. + + Due to the lack of a proper expression parser in f2py, this + function uses a heuristic approach that assumes that Fortran + arithmetic expressions are valid C arithmetic expressions when + mapping Fortran function calls to the corresponding C function/CPP + macros calls. + + """ + # TODO: support Fortran `len` function with optional kind parameter + expr = re.sub(r'\blen\b', 'f2py_slen', expr) + return expr + + +def getstrlength(var): + if isstringfunction(var): + if 'result' in var: + a = var['result'] + else: + a = var['name'] + if a in var['vars']: + return getstrlength(var['vars'][a]) + else: + errmess('getstrlength: function %s has no return value?!\n' % a) + if not isstring(var): + errmess( + 'getstrlength: expected a signature of a string but got: %s\n' % (repr(var))) + len = '1' + if 'charselector' in var: + a = var['charselector'] + if '*' in a: + len = a['*'] + elif 'len' in a: + len = f2cexpr(a['len']) + if re.match(r'\(\s*(\*|:)\s*\)', len) or re.match(r'(\*|:)', len): + if isintent_hide(var): + errmess('getstrlength:intent(hide): expected a string with defined length but got: %s\n' % ( + repr(var))) + len = '-1' + return len + + +def getarrdims(a, var, verbose=0): + ret = {} + if isstring(var) and not isarray(var): + ret['size'] = getstrlength(var) + ret['rank'] = '0' + ret['dims'] = '' + elif isscalar(var): + ret['size'] = '1' + ret['rank'] = '0' + ret['dims'] = '' + elif isarray(var): + dim = copy.copy(var['dimension']) + ret['size'] = '*'.join(dim) + try: + ret['size'] = repr(eval(ret['size'])) + except Exception: + pass + ret['dims'] = ','.join(dim) + ret['rank'] = repr(len(dim)) + ret['rank*[-1]'] = repr(len(dim) * [-1])[1:-1] + for i in range(len(dim)): # solve dim for dependencies + v = [] + if dim[i] in depargs: + v = [dim[i]] + else: + for va in depargs: + if re.match(r'.*?\b%s\b.*' % va, dim[i]): + v.append(va) + for va in v: + if depargs.index(va) > depargs.index(a): + dim[i] = '*' + break + ret['setdims'], i = '', -1 + for d in dim: + i = i + 1 + if d not in ['*', ':', '(*)', '(:)']: + ret['setdims'] = '%s#varname#_Dims[%d]=%s,' % ( + ret['setdims'], i, d) + if ret['setdims']: + ret['setdims'] = ret['setdims'][:-1] + ret['cbsetdims'], i = '', -1 + for d in var['dimension']: + i = i + 1 + if d not in ['*', ':', '(*)', '(:)']: + ret['cbsetdims'] = '%s#varname#_Dims[%d]=%s,' % ( + ret['cbsetdims'], i, d) + elif isintent_in(var): + outmess('getarrdims:warning: assumed shape array, using 0 instead of %r\n' + % (d)) + ret['cbsetdims'] = '%s#varname#_Dims[%d]=%s,' % ( + ret['cbsetdims'], i, 0) + elif verbose: + errmess( + 'getarrdims: If in call-back function: array argument %s must have bounded dimensions: got %s\n' % (repr(a), repr(d))) + if ret['cbsetdims']: + ret['cbsetdims'] = ret['cbsetdims'][:-1] +# if not isintent_c(var): +# var['dimension'].reverse() + return ret + + +def getpydocsign(a, var): + global lcb_map + if isfunction(var): + if 'result' in var: + af = var['result'] + else: + af = var['name'] + if af in var['vars']: + return getpydocsign(af, var['vars'][af]) + else: + errmess('getctype: function %s has no return value?!\n' % af) + return '', '' + sig, sigout = a, a + opt = '' + if isintent_in(var): + opt = 'input' + elif isintent_inout(var): + opt = 'in/output' + out_a = a + if isintent_out(var): + for k in var['intent']: + if k[:4] == 'out=': + out_a = k[4:] + break + init = '' + ctype = getctype(var) + + if hasinitvalue(var): + init, showinit = getinit(a, var) + init = ', optional\\n Default: %s' % showinit + if isscalar(var): + if isintent_inout(var): + sig = '%s : %s rank-0 array(%s,\'%s\')%s' % (a, opt, c2py_map[ctype], + c2pycode_map[ctype], init) + else: + sig = '%s : %s %s%s' % (a, opt, c2py_map[ctype], init) + sigout = '%s : %s' % (out_a, c2py_map[ctype]) + elif isstring(var): + if isintent_inout(var): + sig = '%s : %s rank-0 array(string(len=%s),\'c\')%s' % ( + a, opt, getstrlength(var), init) + else: + sig = '%s : %s string(len=%s)%s' % ( + a, opt, getstrlength(var), init) + sigout = '%s : string(len=%s)' % (out_a, getstrlength(var)) + elif isarray(var): + dim = var['dimension'] + rank = repr(len(dim)) + sig = '%s : %s rank-%s array(\'%s\') with bounds (%s)%s' % (a, opt, rank, + c2pycode_map[ + ctype], + ','.join(dim), init) + if a == out_a: + sigout = '%s : rank-%s array(\'%s\') with bounds (%s)'\ + % (a, rank, c2pycode_map[ctype], ','.join(dim)) + else: + sigout = '%s : rank-%s array(\'%s\') with bounds (%s) and %s storage'\ + % (out_a, rank, c2pycode_map[ctype], ','.join(dim), a) + elif isexternal(var): + ua = '' + if a in lcb_map and lcb_map[a] in lcb2_map and 'argname' in lcb2_map[lcb_map[a]]: + ua = lcb2_map[lcb_map[a]]['argname'] + if not ua == a: + ua = ' => %s' % ua + else: + ua = '' + sig = '%s : call-back function%s' % (a, ua) + sigout = sig + else: + errmess( + 'getpydocsign: Could not resolve docsignature for "%s".\n' % a) + return sig, sigout + + +def getarrdocsign(a, var): + ctype = getctype(var) + if isstring(var) and (not isarray(var)): + sig = '%s : rank-0 array(string(len=%s),\'c\')' % (a, + getstrlength(var)) + elif isscalar(var): + sig = '%s : rank-0 array(%s,\'%s\')' % (a, c2py_map[ctype], + c2pycode_map[ctype],) + elif isarray(var): + dim = var['dimension'] + rank = repr(len(dim)) + sig = '%s : rank-%s array(\'%s\') with bounds (%s)' % (a, rank, + c2pycode_map[ + ctype], + ','.join(dim)) + return sig + + +def getinit(a, var): + if isstring(var): + init, showinit = '""', "''" + else: + init, showinit = '', '' + if hasinitvalue(var): + init = var['='] + showinit = init + if iscomplex(var) or iscomplexarray(var): + ret = {} + + try: + v = var["="] + if ',' in v: + ret['init.r'], ret['init.i'] = markoutercomma( + v[1:-1]).split('@,@') + else: + v = eval(v, {}, {}) + ret['init.r'], ret['init.i'] = str(v.real), str(v.imag) + except Exception: + raise ValueError( + 'getinit: expected complex number `(r,i)\' but got `%s\' as initial value of %r.' % (init, a)) + if isarray(var): + init = '(capi_c.r=%s,capi_c.i=%s,capi_c)' % ( + ret['init.r'], ret['init.i']) + elif isstring(var): + if not init: + init, showinit = '""', "''" + if init[0] == "'": + init = '"%s"' % (init[1:-1].replace('"', '\\"')) + if init[0] == '"': + showinit = "'%s'" % (init[1:-1]) + return init, showinit + + +def get_elsize(var): + if isstring(var) or isstringarray(var): + elsize = getstrlength(var) + # override with user-specified length when available: + elsize = var['charselector'].get('f2py_len', elsize) + return elsize + if ischaracter(var) or ischaracterarray(var): + return '1' + # for numerical types, PyArray_New* functions ignore specified + # elsize, so we just return 1 and let elsize be determined at + # runtime, see fortranobject.c + return '1' + + +def sign2map(a, var): + """ + varname,ctype,atype + init,init.r,init.i,pytype + vardebuginfo,vardebugshowvalue,varshowvalue + varrformat + + intent + """ + out_a = a + if isintent_out(var): + for k in var['intent']: + if k[:4] == 'out=': + out_a = k[4:] + break + ret = {'varname': a, 'outvarname': out_a, 'ctype': getctype(var)} + intent_flags = [] + for f, s in isintent_dict.items(): + if f(var): + intent_flags.append('F2PY_%s' % s) + if intent_flags: + # TODO: Evaluate intent_flags here. + ret['intent'] = '|'.join(intent_flags) + else: + ret['intent'] = 'F2PY_INTENT_IN' + if isarray(var): + ret['varrformat'] = 'N' + elif ret['ctype'] in c2buildvalue_map: + ret['varrformat'] = c2buildvalue_map[ret['ctype']] + else: + ret['varrformat'] = 'O' + ret['init'], ret['showinit'] = getinit(a, var) + if hasinitvalue(var) and iscomplex(var) and not isarray(var): + ret['init.r'], ret['init.i'] = markoutercomma( + ret['init'][1:-1]).split('@,@') + if isexternal(var): + ret['cbnamekey'] = a + if a in lcb_map: + ret['cbname'] = lcb_map[a] + ret['maxnofargs'] = lcb2_map[lcb_map[a]]['maxnofargs'] + ret['nofoptargs'] = lcb2_map[lcb_map[a]]['nofoptargs'] + ret['cbdocstr'] = lcb2_map[lcb_map[a]]['docstr'] + ret['cblatexdocstr'] = lcb2_map[lcb_map[a]]['latexdocstr'] + else: + ret['cbname'] = a + errmess('sign2map: Confused: external %s is not in lcb_map%s.\n' % ( + a, list(lcb_map.keys()))) + if isstring(var): + ret['length'] = getstrlength(var) + if isarray(var): + ret = dictappend(ret, getarrdims(a, var)) + dim = copy.copy(var['dimension']) + if ret['ctype'] in c2capi_map: + ret['atype'] = c2capi_map[ret['ctype']] + ret['elsize'] = get_elsize(var) + # Debug info + if debugcapi(var): + il = [isintent_in, 'input', isintent_out, 'output', + isintent_inout, 'inoutput', isrequired, 'required', + isoptional, 'optional', isintent_hide, 'hidden', + iscomplex, 'complex scalar', + l_and(isscalar, l_not(iscomplex)), 'scalar', + isstring, 'string', isarray, 'array', + iscomplexarray, 'complex array', isstringarray, 'string array', + iscomplexfunction, 'complex function', + l_and(isfunction, l_not(iscomplexfunction)), 'function', + isexternal, 'callback', + isintent_callback, 'callback', + isintent_aux, 'auxiliary', + ] + rl = [] + for i in range(0, len(il), 2): + if il[i](var): + rl.append(il[i + 1]) + if isstring(var): + rl.append('slen(%s)=%s' % (a, ret['length'])) + if isarray(var): + ddim = ','.join( + map(lambda x, y: '%s|%s' % (x, y), var['dimension'], dim)) + rl.append('dims(%s)' % ddim) + if isexternal(var): + ret['vardebuginfo'] = 'debug-capi:%s=>%s:%s' % ( + a, ret['cbname'], ','.join(rl)) + else: + ret['vardebuginfo'] = 'debug-capi:%s %s=%s:%s' % ( + ret['ctype'], a, ret['showinit'], ','.join(rl)) + if isscalar(var): + if ret['ctype'] in cformat_map: + ret['vardebugshowvalue'] = 'debug-capi:%s=%s' % ( + a, cformat_map[ret['ctype']]) + if isstring(var): + ret['vardebugshowvalue'] = 'debug-capi:slen(%s)=%%d %s=\\"%%s\\"' % ( + a, a) + if isexternal(var): + ret['vardebugshowvalue'] = 'debug-capi:%s=%%p' % (a) + if ret['ctype'] in cformat_map: + ret['varshowvalue'] = '#name#:%s=%s' % (a, cformat_map[ret['ctype']]) + ret['showvalueformat'] = '%s' % (cformat_map[ret['ctype']]) + if isstring(var): + ret['varshowvalue'] = '#name#:slen(%s)=%%d %s=\\"%%s\\"' % (a, a) + ret['pydocsign'], ret['pydocsignout'] = getpydocsign(a, var) + if hasnote(var): + ret['note'] = var['note'] + return ret + + +def routsign2map(rout): + """ + name,NAME,begintitle,endtitle + rname,ctype,rformat + routdebugshowvalue + """ + global lcb_map + name = rout['name'] + fname = getfortranname(rout) + ret = {'name': name, + 'texname': name.replace('_', '\\_'), + 'name_lower': name.lower(), + 'NAME': name.upper(), + 'begintitle': gentitle(name), + 'endtitle': gentitle('end of %s' % name), + 'fortranname': fname, + 'FORTRANNAME': fname.upper(), + 'callstatement': getcallstatement(rout) or '', + 'usercode': getusercode(rout) or '', + 'usercode1': getusercode1(rout) or '', + } + if '_' in fname: + ret['F_FUNC'] = 'F_FUNC_US' + else: + ret['F_FUNC'] = 'F_FUNC' + if '_' in name: + ret['F_WRAPPEDFUNC'] = 'F_WRAPPEDFUNC_US' + else: + ret['F_WRAPPEDFUNC'] = 'F_WRAPPEDFUNC' + lcb_map = {} + if 'use' in rout: + for u in rout['use'].keys(): + if u in cb_rules.cb_map: + for un in cb_rules.cb_map[u]: + ln = un[0] + if 'map' in rout['use'][u]: + for k in rout['use'][u]['map'].keys(): + if rout['use'][u]['map'][k] == un[0]: + ln = k + break + lcb_map[ln] = un[1] + elif 'externals' in rout and rout['externals']: + errmess('routsign2map: Confused: function %s has externals %s but no "use" statement.\n' % ( + ret['name'], repr(rout['externals']))) + ret['callprotoargument'] = getcallprotoargument(rout, lcb_map) or '' + if isfunction(rout): + if 'result' in rout: + a = rout['result'] + else: + a = rout['name'] + ret['rname'] = a + ret['pydocsign'], ret['pydocsignout'] = getpydocsign(a, rout) + ret['ctype'] = getctype(rout['vars'][a]) + if hasresultnote(rout): + ret['resultnote'] = rout['vars'][a]['note'] + rout['vars'][a]['note'] = ['See elsewhere.'] + if ret['ctype'] in c2buildvalue_map: + ret['rformat'] = c2buildvalue_map[ret['ctype']] + else: + ret['rformat'] = 'O' + errmess('routsign2map: no c2buildvalue key for type %s\n' % + (repr(ret['ctype']))) + if debugcapi(rout): + if ret['ctype'] in cformat_map: + ret['routdebugshowvalue'] = 'debug-capi:%s=%s' % ( + a, cformat_map[ret['ctype']]) + if isstringfunction(rout): + ret['routdebugshowvalue'] = 'debug-capi:slen(%s)=%%d %s=\\"%%s\\"' % ( + a, a) + if isstringfunction(rout): + ret['rlength'] = getstrlength(rout['vars'][a]) + if ret['rlength'] == '-1': + errmess('routsign2map: expected explicit specification of the length of the string returned by the fortran function %s; taking 10.\n' % ( + repr(rout['name']))) + ret['rlength'] = '10' + if hasnote(rout): + ret['note'] = rout['note'] + rout['note'] = ['See elsewhere.'] + return ret + + +def modsign2map(m): + """ + modulename + """ + if ismodule(m): + ret = {'f90modulename': m['name'], + 'F90MODULENAME': m['name'].upper(), + 'texf90modulename': m['name'].replace('_', '\\_')} + else: + ret = {'modulename': m['name'], + 'MODULENAME': m['name'].upper(), + 'texmodulename': m['name'].replace('_', '\\_')} + ret['restdoc'] = getrestdoc(m) or [] + if hasnote(m): + ret['note'] = m['note'] + ret['usercode'] = getusercode(m) or '' + ret['usercode1'] = getusercode1(m) or '' + if m['body']: + ret['interface_usercode'] = getusercode(m['body'][0]) or '' + else: + ret['interface_usercode'] = '' + ret['pymethoddef'] = getpymethoddef(m) or '' + if 'coutput' in m: + ret['coutput'] = m['coutput'] + if 'f2py_wrapper_output' in m: + ret['f2py_wrapper_output'] = m['f2py_wrapper_output'] + return ret + + +def cb_sign2map(a, var, index=None): + ret = {'varname': a} + ret['varname_i'] = ret['varname'] + ret['ctype'] = getctype(var) + if ret['ctype'] in c2capi_map: + ret['atype'] = c2capi_map[ret['ctype']] + ret['elsize'] = get_elsize(var) + if ret['ctype'] in cformat_map: + ret['showvalueformat'] = '%s' % (cformat_map[ret['ctype']]) + if isarray(var): + ret = dictappend(ret, getarrdims(a, var)) + ret['pydocsign'], ret['pydocsignout'] = getpydocsign(a, var) + if hasnote(var): + ret['note'] = var['note'] + var['note'] = ['See elsewhere.'] + return ret + + +def cb_routsign2map(rout, um): + """ + name,begintitle,endtitle,argname + ctype,rctype,maxnofargs,nofoptargs,returncptr + """ + ret = {'name': 'cb_%s_in_%s' % (rout['name'], um), + 'returncptr': ''} + if isintent_callback(rout): + if '_' in rout['name']: + F_FUNC = 'F_FUNC_US' + else: + F_FUNC = 'F_FUNC' + ret['callbackname'] = '%s(%s,%s)' \ + % (F_FUNC, + rout['name'].lower(), + rout['name'].upper(), + ) + ret['static'] = 'extern' + else: + ret['callbackname'] = ret['name'] + ret['static'] = 'static' + ret['argname'] = rout['name'] + ret['begintitle'] = gentitle(ret['name']) + ret['endtitle'] = gentitle('end of %s' % ret['name']) + ret['ctype'] = getctype(rout) + ret['rctype'] = 'void' + if ret['ctype'] == 'string': + ret['rctype'] = 'void' + else: + ret['rctype'] = ret['ctype'] + if ret['rctype'] != 'void': + if iscomplexfunction(rout): + ret['returncptr'] = """ +#ifdef F2PY_CB_RETURNCOMPLEX +return_value= +#endif +""" + else: + ret['returncptr'] = 'return_value=' + if ret['ctype'] in cformat_map: + ret['showvalueformat'] = '%s' % (cformat_map[ret['ctype']]) + if isstringfunction(rout): + ret['strlength'] = getstrlength(rout) + if isfunction(rout): + if 'result' in rout: + a = rout['result'] + else: + a = rout['name'] + if hasnote(rout['vars'][a]): + ret['note'] = rout['vars'][a]['note'] + rout['vars'][a]['note'] = ['See elsewhere.'] + ret['rname'] = a + ret['pydocsign'], ret['pydocsignout'] = getpydocsign(a, rout) + if iscomplexfunction(rout): + ret['rctype'] = """ +#ifdef F2PY_CB_RETURNCOMPLEX +#ctype# +#else +void +#endif +""" + else: + if hasnote(rout): + ret['note'] = rout['note'] + rout['note'] = ['See elsewhere.'] + nofargs = 0 + nofoptargs = 0 + if 'args' in rout and 'vars' in rout: + for a in rout['args']: + var = rout['vars'][a] + if l_or(isintent_in, isintent_inout)(var): + nofargs = nofargs + 1 + if isoptional(var): + nofoptargs = nofoptargs + 1 + ret['maxnofargs'] = repr(nofargs) + ret['nofoptargs'] = repr(nofoptargs) + if hasnote(rout) and isfunction(rout) and 'result' in rout: + ret['routnote'] = rout['note'] + rout['note'] = ['See elsewhere.'] + return ret + + +def common_sign2map(a, var): # obsolute + ret = {'varname': a, 'ctype': getctype(var)} + if isstringarray(var): + ret['ctype'] = 'char' + if ret['ctype'] in c2capi_map: + ret['atype'] = c2capi_map[ret['ctype']] + ret['elsize'] = get_elsize(var) + if ret['ctype'] in cformat_map: + ret['showvalueformat'] = '%s' % (cformat_map[ret['ctype']]) + if isarray(var): + ret = dictappend(ret, getarrdims(a, var)) + elif isstring(var): + ret['size'] = getstrlength(var) + ret['rank'] = '1' + ret['pydocsign'], ret['pydocsignout'] = getpydocsign(a, var) + if hasnote(var): + ret['note'] = var['note'] + var['note'] = ['See elsewhere.'] + # for strings this returns 0-rank but actually is 1-rank + ret['arrdocstr'] = getarrdocsign(a, var) + return ret diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/cb_rules.py b/venv/lib/python3.12/site-packages/numpy/f2py/cb_rules.py new file mode 100644 index 0000000000000000000000000000000000000000..faf8dd4013018a3fd1cfc1afdf62104ed98b16b1 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/cb_rules.py @@ -0,0 +1,644 @@ +""" +Build call-back mechanism for f2py2e. + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +from . import __version__ +from .auxfuncs import ( + applyrules, debugcapi, dictappend, errmess, getargs, hasnote, isarray, + iscomplex, iscomplexarray, iscomplexfunction, isfunction, isintent_c, + isintent_hide, isintent_in, isintent_inout, isintent_nothide, + isintent_out, isoptional, isrequired, isscalar, isstring, + isstringfunction, issubroutine, l_and, l_not, l_or, outmess, replace, + stripcomma, throw_error +) +from . import cfuncs + +f2py_version = __version__.version + + +################## Rules for callback function ############## + +cb_routine_rules = { + 'cbtypedefs': 'typedef #rctype#(*#name#_typedef)(#optargs_td##args_td##strarglens_td##noargs#);', + 'body': """ +#begintitle# +typedef struct { + PyObject *capi; + PyTupleObject *args_capi; + int nofargs; + jmp_buf jmpbuf; +} #name#_t; + +#if defined(F2PY_THREAD_LOCAL_DECL) && !defined(F2PY_USE_PYTHON_TLS) + +static F2PY_THREAD_LOCAL_DECL #name#_t *_active_#name# = NULL; + +static #name#_t *swap_active_#name#(#name#_t *ptr) { + #name#_t *prev = _active_#name#; + _active_#name# = ptr; + return prev; +} + +static #name#_t *get_active_#name#(void) { + return _active_#name#; +} + +#else + +static #name#_t *swap_active_#name#(#name#_t *ptr) { + char *key = "__f2py_cb_#name#"; + return (#name#_t *)F2PySwapThreadLocalCallbackPtr(key, ptr); +} + +static #name#_t *get_active_#name#(void) { + char *key = "__f2py_cb_#name#"; + return (#name#_t *)F2PyGetThreadLocalCallbackPtr(key); +} + +#endif + +/*typedef #rctype#(*#name#_typedef)(#optargs_td##args_td##strarglens_td##noargs#);*/ +#static# #rctype# #callbackname# (#optargs##args##strarglens##noargs#) { + #name#_t cb_local = { NULL, NULL, 0 }; + #name#_t *cb = NULL; + PyTupleObject *capi_arglist = NULL; + PyObject *capi_return = NULL; + PyObject *capi_tmp = NULL; + PyObject *capi_arglist_list = NULL; + int capi_j,capi_i = 0; + int capi_longjmp_ok = 1; +#decl# +#ifdef F2PY_REPORT_ATEXIT +f2py_cb_start_clock(); +#endif + cb = get_active_#name#(); + if (cb == NULL) { + capi_longjmp_ok = 0; + cb = &cb_local; + } + capi_arglist = cb->args_capi; + CFUNCSMESS(\"cb:Call-back function #name# (maxnofargs=#maxnofargs#(-#nofoptargs#))\\n\"); + CFUNCSMESSPY(\"cb:#name#_capi=\",cb->capi); + if (cb->capi==NULL) { + capi_longjmp_ok = 0; + cb->capi = PyObject_GetAttrString(#modulename#_module,\"#argname#\"); + CFUNCSMESSPY(\"cb:#name#_capi=\",cb->capi); + } + if (cb->capi==NULL) { + PyErr_SetString(#modulename#_error,\"cb: Callback #argname# not defined (as an argument or module #modulename# attribute).\\n\"); + goto capi_fail; + } + if (F2PyCapsule_Check(cb->capi)) { + #name#_typedef #name#_cptr; + #name#_cptr = F2PyCapsule_AsVoidPtr(cb->capi); + #returncptr#(*#name#_cptr)(#optargs_nm##args_nm##strarglens_nm#); + #return# + } + if (capi_arglist==NULL) { + capi_longjmp_ok = 0; + capi_tmp = PyObject_GetAttrString(#modulename#_module,\"#argname#_extra_args\"); + if (capi_tmp) { + capi_arglist = (PyTupleObject *)PySequence_Tuple(capi_tmp); + Py_DECREF(capi_tmp); + if (capi_arglist==NULL) { + PyErr_SetString(#modulename#_error,\"Failed to convert #modulename#.#argname#_extra_args to tuple.\\n\"); + goto capi_fail; + } + } else { + PyErr_Clear(); + capi_arglist = (PyTupleObject *)Py_BuildValue(\"()\"); + } + } + if (capi_arglist == NULL) { + PyErr_SetString(#modulename#_error,\"Callback #argname# argument list is not set.\\n\"); + goto capi_fail; + } +#setdims# +#ifdef PYPY_VERSION +#define CAPI_ARGLIST_SETITEM(idx, value) PyList_SetItem((PyObject *)capi_arglist_list, idx, value) + capi_arglist_list = PySequence_List((PyObject *)capi_arglist); + if (capi_arglist_list == NULL) goto capi_fail; +#else +#define CAPI_ARGLIST_SETITEM(idx, value) PyTuple_SetItem((PyObject *)capi_arglist, idx, value) +#endif +#pyobjfrom# +#undef CAPI_ARGLIST_SETITEM +#ifdef PYPY_VERSION + CFUNCSMESSPY(\"cb:capi_arglist=\",capi_arglist_list); +#else + CFUNCSMESSPY(\"cb:capi_arglist=\",capi_arglist); +#endif + CFUNCSMESS(\"cb:Call-back calling Python function #argname#.\\n\"); +#ifdef F2PY_REPORT_ATEXIT +f2py_cb_start_call_clock(); +#endif +#ifdef PYPY_VERSION + capi_return = PyObject_CallObject(cb->capi,(PyObject *)capi_arglist_list); + Py_DECREF(capi_arglist_list); + capi_arglist_list = NULL; +#else + capi_return = PyObject_CallObject(cb->capi,(PyObject *)capi_arglist); +#endif +#ifdef F2PY_REPORT_ATEXIT +f2py_cb_stop_call_clock(); +#endif + CFUNCSMESSPY(\"cb:capi_return=\",capi_return); + if (capi_return == NULL) { + fprintf(stderr,\"capi_return is NULL\\n\"); + goto capi_fail; + } + if (capi_return == Py_None) { + Py_DECREF(capi_return); + capi_return = Py_BuildValue(\"()\"); + } + else if (!PyTuple_Check(capi_return)) { + capi_return = Py_BuildValue(\"(N)\",capi_return); + } + capi_j = PyTuple_Size(capi_return); + capi_i = 0; +#frompyobj# + CFUNCSMESS(\"cb:#name#:successful\\n\"); + Py_DECREF(capi_return); +#ifdef F2PY_REPORT_ATEXIT +f2py_cb_stop_clock(); +#endif + goto capi_return_pt; +capi_fail: + fprintf(stderr,\"Call-back #name# failed.\\n\"); + Py_XDECREF(capi_return); + Py_XDECREF(capi_arglist_list); + if (capi_longjmp_ok) { + longjmp(cb->jmpbuf,-1); + } +capi_return_pt: + ; +#return# +} +#endtitle# +""", + 'need': ['setjmp.h', 'CFUNCSMESS', 'F2PY_THREAD_LOCAL_DECL'], + 'maxnofargs': '#maxnofargs#', + 'nofoptargs': '#nofoptargs#', + 'docstr': """\ + def #argname#(#docsignature#): return #docreturn#\\n\\ +#docstrsigns#""", + 'latexdocstr': """ +{{}\\verb@def #argname#(#latexdocsignature#): return #docreturn#@{}} +#routnote# + +#latexdocstrsigns#""", + 'docstrshort': 'def #argname#(#docsignature#): return #docreturn#' +} +cb_rout_rules = [ + { # Init + 'separatorsfor': {'decl': '\n', + 'args': ',', 'optargs': '', 'pyobjfrom': '\n', 'freemem': '\n', + 'args_td': ',', 'optargs_td': '', + 'args_nm': ',', 'optargs_nm': '', + 'frompyobj': '\n', 'setdims': '\n', + 'docstrsigns': '\\n"\n"', + 'latexdocstrsigns': '\n', + 'latexdocstrreq': '\n', 'latexdocstropt': '\n', + 'latexdocstrout': '\n', 'latexdocstrcbs': '\n', + }, + 'decl': '/*decl*/', 'pyobjfrom': '/*pyobjfrom*/', 'frompyobj': '/*frompyobj*/', + 'args': [], 'optargs': '', 'return': '', 'strarglens': '', 'freemem': '/*freemem*/', + 'args_td': [], 'optargs_td': '', 'strarglens_td': '', + 'args_nm': [], 'optargs_nm': '', 'strarglens_nm': '', + 'noargs': '', + 'setdims': '/*setdims*/', + 'docstrsigns': '', 'latexdocstrsigns': '', + 'docstrreq': ' Required arguments:', + 'docstropt': ' Optional arguments:', + 'docstrout': ' Return objects:', + 'docstrcbs': ' Call-back functions:', + 'docreturn': '', 'docsign': '', 'docsignopt': '', + 'latexdocstrreq': '\\noindent Required arguments:', + 'latexdocstropt': '\\noindent Optional arguments:', + 'latexdocstrout': '\\noindent Return objects:', + 'latexdocstrcbs': '\\noindent Call-back functions:', + 'routnote': {hasnote: '--- #note#', l_not(hasnote): ''}, + }, { # Function + 'decl': ' #ctype# return_value = 0;', + 'frompyobj': [ + {debugcapi: ' CFUNCSMESS("cb:Getting return_value->");'}, + '''\ + if (capi_j>capi_i) { + GETSCALARFROMPYTUPLE(capi_return,capi_i++,&return_value,#ctype#, + "#ctype#_from_pyobj failed in converting return_value of" + " call-back function #name# to C #ctype#\\n"); + } else { + fprintf(stderr,"Warning: call-back function #name# did not provide" + " return value (index=%d, type=#ctype#)\\n",capi_i); + }''', + {debugcapi: + ' fprintf(stderr,"#showvalueformat#.\\n",return_value);'} + ], + 'need': ['#ctype#_from_pyobj', {debugcapi: 'CFUNCSMESS'}, 'GETSCALARFROMPYTUPLE'], + 'return': ' return return_value;', + '_check': l_and(isfunction, l_not(isstringfunction), l_not(iscomplexfunction)) + }, + { # String function + 'pyobjfrom': {debugcapi: ' fprintf(stderr,"debug-capi:cb:#name#:%d:\\n",return_value_len);'}, + 'args': '#ctype# return_value,int return_value_len', + 'args_nm': 'return_value,&return_value_len', + 'args_td': '#ctype# ,int', + 'frompyobj': [ + {debugcapi: ' CFUNCSMESS("cb:Getting return_value->\\"");'}, + """\ + if (capi_j>capi_i) { + GETSTRFROMPYTUPLE(capi_return,capi_i++,return_value,return_value_len); + } else { + fprintf(stderr,"Warning: call-back function #name# did not provide" + " return value (index=%d, type=#ctype#)\\n",capi_i); + }""", + {debugcapi: + ' fprintf(stderr,"#showvalueformat#\\".\\n",return_value);'} + ], + 'need': ['#ctype#_from_pyobj', {debugcapi: 'CFUNCSMESS'}, + 'string.h', 'GETSTRFROMPYTUPLE'], + 'return': 'return;', + '_check': isstringfunction + }, + { # Complex function + 'optargs': """ +#ifndef F2PY_CB_RETURNCOMPLEX +#ctype# *return_value +#endif +""", + 'optargs_nm': """ +#ifndef F2PY_CB_RETURNCOMPLEX +return_value +#endif +""", + 'optargs_td': """ +#ifndef F2PY_CB_RETURNCOMPLEX +#ctype# * +#endif +""", + 'decl': """ +#ifdef F2PY_CB_RETURNCOMPLEX + #ctype# return_value = {0, 0}; +#endif +""", + 'frompyobj': [ + {debugcapi: ' CFUNCSMESS("cb:Getting return_value->");'}, + """\ + if (capi_j>capi_i) { +#ifdef F2PY_CB_RETURNCOMPLEX + GETSCALARFROMPYTUPLE(capi_return,capi_i++,&return_value,#ctype#, + \"#ctype#_from_pyobj failed in converting return_value of call-back\" + \" function #name# to C #ctype#\\n\"); +#else + GETSCALARFROMPYTUPLE(capi_return,capi_i++,return_value,#ctype#, + \"#ctype#_from_pyobj failed in converting return_value of call-back\" + \" function #name# to C #ctype#\\n\"); +#endif + } else { + fprintf(stderr, + \"Warning: call-back function #name# did not provide\" + \" return value (index=%d, type=#ctype#)\\n\",capi_i); + }""", + {debugcapi: """\ +#ifdef F2PY_CB_RETURNCOMPLEX + fprintf(stderr,\"#showvalueformat#.\\n\",(return_value).r,(return_value).i); +#else + fprintf(stderr,\"#showvalueformat#.\\n\",(*return_value).r,(*return_value).i); +#endif +"""} + ], + 'return': """ +#ifdef F2PY_CB_RETURNCOMPLEX + return return_value; +#else + return; +#endif +""", + 'need': ['#ctype#_from_pyobj', {debugcapi: 'CFUNCSMESS'}, + 'string.h', 'GETSCALARFROMPYTUPLE', '#ctype#'], + '_check': iscomplexfunction + }, + {'docstrout': ' #pydocsignout#', + 'latexdocstrout': ['\\item[]{{}\\verb@#pydocsignout#@{}}', + {hasnote: '--- #note#'}], + 'docreturn': '#rname#,', + '_check': isfunction}, + {'_check': issubroutine, 'return': 'return;'} +] + +cb_arg_rules = [ + { # Doc + 'docstropt': {l_and(isoptional, isintent_nothide): ' #pydocsign#'}, + 'docstrreq': {l_and(isrequired, isintent_nothide): ' #pydocsign#'}, + 'docstrout': {isintent_out: ' #pydocsignout#'}, + 'latexdocstropt': {l_and(isoptional, isintent_nothide): ['\\item[]{{}\\verb@#pydocsign#@{}}', + {hasnote: '--- #note#'}]}, + 'latexdocstrreq': {l_and(isrequired, isintent_nothide): ['\\item[]{{}\\verb@#pydocsign#@{}}', + {hasnote: '--- #note#'}]}, + 'latexdocstrout': {isintent_out: ['\\item[]{{}\\verb@#pydocsignout#@{}}', + {l_and(hasnote, isintent_hide): '--- #note#', + l_and(hasnote, isintent_nothide): '--- See above.'}]}, + 'docsign': {l_and(isrequired, isintent_nothide): '#varname#,'}, + 'docsignopt': {l_and(isoptional, isintent_nothide): '#varname#,'}, + 'depend': '' + }, + { + 'args': { + l_and(isscalar, isintent_c): '#ctype# #varname_i#', + l_and(isscalar, l_not(isintent_c)): '#ctype# *#varname_i#_cb_capi', + isarray: '#ctype# *#varname_i#', + isstring: '#ctype# #varname_i#' + }, + 'args_nm': { + l_and(isscalar, isintent_c): '#varname_i#', + l_and(isscalar, l_not(isintent_c)): '#varname_i#_cb_capi', + isarray: '#varname_i#', + isstring: '#varname_i#' + }, + 'args_td': { + l_and(isscalar, isintent_c): '#ctype#', + l_and(isscalar, l_not(isintent_c)): '#ctype# *', + isarray: '#ctype# *', + isstring: '#ctype#' + }, + 'need': {l_or(isscalar, isarray, isstring): '#ctype#'}, + # untested with multiple args + 'strarglens': {isstring: ',int #varname_i#_cb_len'}, + 'strarglens_td': {isstring: ',int'}, # untested with multiple args + # untested with multiple args + 'strarglens_nm': {isstring: ',#varname_i#_cb_len'}, + }, + { # Scalars + 'decl': {l_not(isintent_c): ' #ctype# #varname_i#=(*#varname_i#_cb_capi);'}, + 'error': {l_and(isintent_c, isintent_out, + throw_error('intent(c,out) is forbidden for callback scalar arguments')): + ''}, + 'frompyobj': [{debugcapi: ' CFUNCSMESS("cb:Getting #varname#->");'}, + {isintent_out: + ' if (capi_j>capi_i)\n GETSCALARFROMPYTUPLE(capi_return,capi_i++,#varname_i#_cb_capi,#ctype#,"#ctype#_from_pyobj failed in converting argument #varname# of call-back function #name# to C #ctype#\\n");'}, + {l_and(debugcapi, l_and(l_not(iscomplex), isintent_c)): + ' fprintf(stderr,"#showvalueformat#.\\n",#varname_i#);'}, + {l_and(debugcapi, l_and(l_not(iscomplex), l_not( isintent_c))): + ' fprintf(stderr,"#showvalueformat#.\\n",*#varname_i#_cb_capi);'}, + {l_and(debugcapi, l_and(iscomplex, isintent_c)): + ' fprintf(stderr,"#showvalueformat#.\\n",(#varname_i#).r,(#varname_i#).i);'}, + {l_and(debugcapi, l_and(iscomplex, l_not( isintent_c))): + ' fprintf(stderr,"#showvalueformat#.\\n",(*#varname_i#_cb_capi).r,(*#varname_i#_cb_capi).i);'}, + ], + 'need': [{isintent_out: ['#ctype#_from_pyobj', 'GETSCALARFROMPYTUPLE']}, + {debugcapi: 'CFUNCSMESS'}], + '_check': isscalar + }, { + 'pyobjfrom': [{isintent_in: """\ + if (cb->nofargs>capi_i) + if (CAPI_ARGLIST_SETITEM(capi_i++,pyobj_from_#ctype#1(#varname_i#))) + goto capi_fail;"""}, + {isintent_inout: """\ + if (cb->nofargs>capi_i) + if (CAPI_ARGLIST_SETITEM(capi_i++,pyarr_from_p_#ctype#1(#varname_i#_cb_capi))) + goto capi_fail;"""}], + 'need': [{isintent_in: 'pyobj_from_#ctype#1'}, + {isintent_inout: 'pyarr_from_p_#ctype#1'}, + {iscomplex: '#ctype#'}], + '_check': l_and(isscalar, isintent_nothide), + '_optional': '' + }, { # String + 'frompyobj': [{debugcapi: ' CFUNCSMESS("cb:Getting #varname#->\\"");'}, + """ if (capi_j>capi_i) + GETSTRFROMPYTUPLE(capi_return,capi_i++,#varname_i#,#varname_i#_cb_len);""", + {debugcapi: + ' fprintf(stderr,"#showvalueformat#\\":%d:.\\n",#varname_i#,#varname_i#_cb_len);'}, + ], + 'need': ['#ctype#', 'GETSTRFROMPYTUPLE', + {debugcapi: 'CFUNCSMESS'}, 'string.h'], + '_check': l_and(isstring, isintent_out) + }, { + 'pyobjfrom': [ + {debugcapi: + (' fprintf(stderr,"debug-capi:cb:#varname#=#showvalueformat#:' + '%d:\\n",#varname_i#,#varname_i#_cb_len);')}, + {isintent_in: """\ + if (cb->nofargs>capi_i) + if (CAPI_ARGLIST_SETITEM(capi_i++,pyobj_from_#ctype#1size(#varname_i#,#varname_i#_cb_len))) + goto capi_fail;"""}, + {isintent_inout: """\ + if (cb->nofargs>capi_i) { + int #varname_i#_cb_dims[] = {#varname_i#_cb_len}; + if (CAPI_ARGLIST_SETITEM(capi_i++,pyarr_from_p_#ctype#1(#varname_i#,#varname_i#_cb_dims))) + goto capi_fail; + }"""}], + 'need': [{isintent_in: 'pyobj_from_#ctype#1size'}, + {isintent_inout: 'pyarr_from_p_#ctype#1'}], + '_check': l_and(isstring, isintent_nothide), + '_optional': '' + }, + # Array ... + { + 'decl': ' npy_intp #varname_i#_Dims[#rank#] = {#rank*[-1]#};', + 'setdims': ' #cbsetdims#;', + '_check': isarray, + '_depend': '' + }, + { + 'pyobjfrom': [{debugcapi: ' fprintf(stderr,"debug-capi:cb:#varname#\\n");'}, + {isintent_c: """\ + if (cb->nofargs>capi_i) { + /* tmp_arr will be inserted to capi_arglist_list that will be + destroyed when leaving callback function wrapper together + with tmp_arr. */ + PyArrayObject *tmp_arr = (PyArrayObject *)PyArray_New(&PyArray_Type, + #rank#,#varname_i#_Dims,#atype#,NULL,(char*)#varname_i#,#elsize#, + NPY_ARRAY_CARRAY,NULL); +""", + l_not(isintent_c): """\ + if (cb->nofargs>capi_i) { + /* tmp_arr will be inserted to capi_arglist_list that will be + destroyed when leaving callback function wrapper together + with tmp_arr. */ + PyArrayObject *tmp_arr = (PyArrayObject *)PyArray_New(&PyArray_Type, + #rank#,#varname_i#_Dims,#atype#,NULL,(char*)#varname_i#,#elsize#, + NPY_ARRAY_FARRAY,NULL); +""", + }, + """ + if (tmp_arr==NULL) + goto capi_fail; + if (CAPI_ARGLIST_SETITEM(capi_i++,(PyObject *)tmp_arr)) + goto capi_fail; +}"""], + '_check': l_and(isarray, isintent_nothide, l_or(isintent_in, isintent_inout)), + '_optional': '', + }, { + 'frompyobj': [{debugcapi: ' CFUNCSMESS("cb:Getting #varname#->");'}, + """ if (capi_j>capi_i) { + PyArrayObject *rv_cb_arr = NULL; + if ((capi_tmp = PyTuple_GetItem(capi_return,capi_i++))==NULL) goto capi_fail; + rv_cb_arr = array_from_pyobj(#atype#,#varname_i#_Dims,#rank#,F2PY_INTENT_IN""", + {isintent_c: '|F2PY_INTENT_C'}, + """,capi_tmp); + if (rv_cb_arr == NULL) { + fprintf(stderr,\"rv_cb_arr is NULL\\n\"); + goto capi_fail; + } + MEMCOPY(#varname_i#,PyArray_DATA(rv_cb_arr),PyArray_NBYTES(rv_cb_arr)); + if (capi_tmp != (PyObject *)rv_cb_arr) { + Py_DECREF(rv_cb_arr); + } + }""", + {debugcapi: ' fprintf(stderr,"<-.\\n");'}, + ], + 'need': ['MEMCOPY', {iscomplexarray: '#ctype#'}], + '_check': l_and(isarray, isintent_out) + }, { + 'docreturn': '#varname#,', + '_check': isintent_out + } +] + +################## Build call-back module ############# +cb_map = {} + + +def buildcallbacks(m): + cb_map[m['name']] = [] + for bi in m['body']: + if bi['block'] == 'interface': + for b in bi['body']: + if b: + buildcallback(b, m['name']) + else: + errmess('warning: empty body for %s\n' % (m['name'])) + + +def buildcallback(rout, um): + from . import capi_maps + + outmess(' Constructing call-back function "cb_%s_in_%s"\n' % + (rout['name'], um)) + args, depargs = getargs(rout) + capi_maps.depargs = depargs + var = rout['vars'] + vrd = capi_maps.cb_routsign2map(rout, um) + rd = dictappend({}, vrd) + cb_map[um].append([rout['name'], rd['name']]) + for r in cb_rout_rules: + if ('_check' in r and r['_check'](rout)) or ('_check' not in r): + ar = applyrules(r, vrd, rout) + rd = dictappend(rd, ar) + savevrd = {} + for i, a in enumerate(args): + vrd = capi_maps.cb_sign2map(a, var[a], index=i) + savevrd[a] = vrd + for r in cb_arg_rules: + if '_depend' in r: + continue + if '_optional' in r and isoptional(var[a]): + continue + if ('_check' in r and r['_check'](var[a])) or ('_check' not in r): + ar = applyrules(r, vrd, var[a]) + rd = dictappend(rd, ar) + if '_break' in r: + break + for a in args: + vrd = savevrd[a] + for r in cb_arg_rules: + if '_depend' in r: + continue + if ('_optional' not in r) or ('_optional' in r and isrequired(var[a])): + continue + if ('_check' in r and r['_check'](var[a])) or ('_check' not in r): + ar = applyrules(r, vrd, var[a]) + rd = dictappend(rd, ar) + if '_break' in r: + break + for a in depargs: + vrd = savevrd[a] + for r in cb_arg_rules: + if '_depend' not in r: + continue + if '_optional' in r: + continue + if ('_check' in r and r['_check'](var[a])) or ('_check' not in r): + ar = applyrules(r, vrd, var[a]) + rd = dictappend(rd, ar) + if '_break' in r: + break + if 'args' in rd and 'optargs' in rd: + if isinstance(rd['optargs'], list): + rd['optargs'] = rd['optargs'] + [""" +#ifndef F2PY_CB_RETURNCOMPLEX +, +#endif +"""] + rd['optargs_nm'] = rd['optargs_nm'] + [""" +#ifndef F2PY_CB_RETURNCOMPLEX +, +#endif +"""] + rd['optargs_td'] = rd['optargs_td'] + [""" +#ifndef F2PY_CB_RETURNCOMPLEX +, +#endif +"""] + if isinstance(rd['docreturn'], list): + rd['docreturn'] = stripcomma( + replace('#docreturn#', {'docreturn': rd['docreturn']})) + optargs = stripcomma(replace('#docsignopt#', + {'docsignopt': rd['docsignopt']} + )) + if optargs == '': + rd['docsignature'] = stripcomma( + replace('#docsign#', {'docsign': rd['docsign']})) + else: + rd['docsignature'] = replace('#docsign#[#docsignopt#]', + {'docsign': rd['docsign'], + 'docsignopt': optargs, + }) + rd['latexdocsignature'] = rd['docsignature'].replace('_', '\\_') + rd['latexdocsignature'] = rd['latexdocsignature'].replace(',', ', ') + rd['docstrsigns'] = [] + rd['latexdocstrsigns'] = [] + for k in ['docstrreq', 'docstropt', 'docstrout', 'docstrcbs']: + if k in rd and isinstance(rd[k], list): + rd['docstrsigns'] = rd['docstrsigns'] + rd[k] + k = 'latex' + k + if k in rd and isinstance(rd[k], list): + rd['latexdocstrsigns'] = rd['latexdocstrsigns'] + rd[k][0:1] +\ + ['\\begin{description}'] + rd[k][1:] +\ + ['\\end{description}'] + if 'args' not in rd: + rd['args'] = '' + rd['args_td'] = '' + rd['args_nm'] = '' + if not (rd.get('args') or rd.get('optargs') or rd.get('strarglens')): + rd['noargs'] = 'void' + + ar = applyrules(cb_routine_rules, rd) + cfuncs.callbacks[rd['name']] = ar['body'] + if isinstance(ar['need'], str): + ar['need'] = [ar['need']] + + if 'need' in rd: + for t in cfuncs.typedefs.keys(): + if t in rd['need']: + ar['need'].append(t) + + cfuncs.typedefs_generated[rd['name'] + '_typedef'] = ar['cbtypedefs'] + ar['need'].append(rd['name'] + '_typedef') + cfuncs.needs[rd['name']] = ar['need'] + + capi_maps.lcb2_map[rd['name']] = {'maxnofargs': ar['maxnofargs'], + 'nofoptargs': ar['nofoptargs'], + 'docstr': ar['docstr'], + 'latexdocstr': ar['latexdocstr'], + 'argname': rd['argname'] + } + outmess(' %s\n' % (ar['docstrshort'])) + return +################## Build call-back function ############# diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/cfuncs.py b/venv/lib/python3.12/site-packages/numpy/f2py/cfuncs.py new file mode 100644 index 0000000000000000000000000000000000000000..1dc3247323d55cd4a57416d692025cada3901bbb --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/cfuncs.py @@ -0,0 +1,1545 @@ +#!/usr/bin/env python3 +""" +C declarations, CPP macros, and C functions for f2py2e. +Only required declarations/macros/functions will be used. + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +import sys +import copy + +from . import __version__ + +f2py_version = __version__.version + + +def errmess(s: str) -> None: + """ + Write an error message to stderr. + + This indirection is needed because sys.stderr might not always be available (see #26862). + """ + if sys.stderr is not None: + sys.stderr.write(s) + +##################### Definitions ################## + +outneeds = {'includes0': [], 'includes': [], 'typedefs': [], 'typedefs_generated': [], + 'userincludes': [], + 'cppmacros': [], 'cfuncs': [], 'callbacks': [], 'f90modhooks': [], + 'commonhooks': []} +needs = {} +includes0 = {'includes0': '/*need_includes0*/'} +includes = {'includes': '/*need_includes*/'} +userincludes = {'userincludes': '/*need_userincludes*/'} +typedefs = {'typedefs': '/*need_typedefs*/'} +typedefs_generated = {'typedefs_generated': '/*need_typedefs_generated*/'} +cppmacros = {'cppmacros': '/*need_cppmacros*/'} +cfuncs = {'cfuncs': '/*need_cfuncs*/'} +callbacks = {'callbacks': '/*need_callbacks*/'} +f90modhooks = {'f90modhooks': '/*need_f90modhooks*/', + 'initf90modhooksstatic': '/*initf90modhooksstatic*/', + 'initf90modhooksdynamic': '/*initf90modhooksdynamic*/', + } +commonhooks = {'commonhooks': '/*need_commonhooks*/', + 'initcommonhooks': '/*need_initcommonhooks*/', + } + +############ Includes ################### + +includes0['math.h'] = '#include ' +includes0['string.h'] = '#include ' +includes0['setjmp.h'] = '#include ' + +includes['arrayobject.h'] = '''#define PY_ARRAY_UNIQUE_SYMBOL PyArray_API +#include "arrayobject.h"''' +includes['npy_math.h'] = '#include "numpy/npy_math.h"' + +includes['arrayobject.h'] = '#include "fortranobject.h"' +includes['stdarg.h'] = '#include ' + +############# Type definitions ############### + +typedefs['unsigned_char'] = 'typedef unsigned char unsigned_char;' +typedefs['unsigned_short'] = 'typedef unsigned short unsigned_short;' +typedefs['unsigned_long'] = 'typedef unsigned long unsigned_long;' +typedefs['signed_char'] = 'typedef signed char signed_char;' +typedefs['long_long'] = """ +#if defined(NPY_OS_WIN32) +typedef __int64 long_long; +#else +typedef long long long_long; +typedef unsigned long long unsigned_long_long; +#endif +""" +typedefs['unsigned_long_long'] = """ +#if defined(NPY_OS_WIN32) +typedef __uint64 long_long; +#else +typedef unsigned long long unsigned_long_long; +#endif +""" +typedefs['long_double'] = """ +#ifndef _LONG_DOUBLE +typedef long double long_double; +#endif +""" +typedefs[ + 'complex_long_double'] = 'typedef struct {long double r,i;} complex_long_double;' +typedefs['complex_float'] = 'typedef struct {float r,i;} complex_float;' +typedefs['complex_double'] = 'typedef struct {double r,i;} complex_double;' +typedefs['string'] = """typedef char * string;""" +typedefs['character'] = """typedef char character;""" + + +############### CPP macros #################### +cppmacros['CFUNCSMESS'] = """ +#ifdef DEBUGCFUNCS +#define CFUNCSMESS(mess) fprintf(stderr,\"debug-capi:\"mess); +#define CFUNCSMESSPY(mess,obj) CFUNCSMESS(mess) \\ + PyObject_Print((PyObject *)obj,stderr,Py_PRINT_RAW);\\ + fprintf(stderr,\"\\n\"); +#else +#define CFUNCSMESS(mess) +#define CFUNCSMESSPY(mess,obj) +#endif +""" +cppmacros['F_FUNC'] = """ +#if defined(PREPEND_FORTRAN) +#if defined(NO_APPEND_FORTRAN) +#if defined(UPPERCASE_FORTRAN) +#define F_FUNC(f,F) _##F +#else +#define F_FUNC(f,F) _##f +#endif +#else +#if defined(UPPERCASE_FORTRAN) +#define F_FUNC(f,F) _##F##_ +#else +#define F_FUNC(f,F) _##f##_ +#endif +#endif +#else +#if defined(NO_APPEND_FORTRAN) +#if defined(UPPERCASE_FORTRAN) +#define F_FUNC(f,F) F +#else +#define F_FUNC(f,F) f +#endif +#else +#if defined(UPPERCASE_FORTRAN) +#define F_FUNC(f,F) F##_ +#else +#define F_FUNC(f,F) f##_ +#endif +#endif +#endif +#if defined(UNDERSCORE_G77) +#define F_FUNC_US(f,F) F_FUNC(f##_,F##_) +#else +#define F_FUNC_US(f,F) F_FUNC(f,F) +#endif +""" +cppmacros['F_WRAPPEDFUNC'] = """ +#if defined(PREPEND_FORTRAN) +#if defined(NO_APPEND_FORTRAN) +#if defined(UPPERCASE_FORTRAN) +#define F_WRAPPEDFUNC(f,F) _F2PYWRAP##F +#else +#define F_WRAPPEDFUNC(f,F) _f2pywrap##f +#endif +#else +#if defined(UPPERCASE_FORTRAN) +#define F_WRAPPEDFUNC(f,F) _F2PYWRAP##F##_ +#else +#define F_WRAPPEDFUNC(f,F) _f2pywrap##f##_ +#endif +#endif +#else +#if defined(NO_APPEND_FORTRAN) +#if defined(UPPERCASE_FORTRAN) +#define F_WRAPPEDFUNC(f,F) F2PYWRAP##F +#else +#define F_WRAPPEDFUNC(f,F) f2pywrap##f +#endif +#else +#if defined(UPPERCASE_FORTRAN) +#define F_WRAPPEDFUNC(f,F) F2PYWRAP##F##_ +#else +#define F_WRAPPEDFUNC(f,F) f2pywrap##f##_ +#endif +#endif +#endif +#if defined(UNDERSCORE_G77) +#define F_WRAPPEDFUNC_US(f,F) F_WRAPPEDFUNC(f##_,F##_) +#else +#define F_WRAPPEDFUNC_US(f,F) F_WRAPPEDFUNC(f,F) +#endif +""" +cppmacros['F_MODFUNC'] = """ +#if defined(F90MOD2CCONV1) /*E.g. Compaq Fortran */ +#if defined(NO_APPEND_FORTRAN) +#define F_MODFUNCNAME(m,f) $ ## m ## $ ## f +#else +#define F_MODFUNCNAME(m,f) $ ## m ## $ ## f ## _ +#endif +#endif + +#if defined(F90MOD2CCONV2) /*E.g. IBM XL Fortran, not tested though */ +#if defined(NO_APPEND_FORTRAN) +#define F_MODFUNCNAME(m,f) __ ## m ## _MOD_ ## f +#else +#define F_MODFUNCNAME(m,f) __ ## m ## _MOD_ ## f ## _ +#endif +#endif + +#if defined(F90MOD2CCONV3) /*E.g. MIPSPro Compilers */ +#if defined(NO_APPEND_FORTRAN) +#define F_MODFUNCNAME(m,f) f ## .in. ## m +#else +#define F_MODFUNCNAME(m,f) f ## .in. ## m ## _ +#endif +#endif +/* +#if defined(UPPERCASE_FORTRAN) +#define F_MODFUNC(m,M,f,F) F_MODFUNCNAME(M,F) +#else +#define F_MODFUNC(m,M,f,F) F_MODFUNCNAME(m,f) +#endif +*/ + +#define F_MODFUNC(m,f) (*(f2pymodstruct##m##.##f)) +""" +cppmacros['SWAPUNSAFE'] = """ +#define SWAP(a,b) (size_t)(a) = ((size_t)(a) ^ (size_t)(b));\\ + (size_t)(b) = ((size_t)(a) ^ (size_t)(b));\\ + (size_t)(a) = ((size_t)(a) ^ (size_t)(b)) +""" +cppmacros['SWAP'] = """ +#define SWAP(a,b,t) {\\ + t *c;\\ + c = a;\\ + a = b;\\ + b = c;} +""" +# cppmacros['ISCONTIGUOUS']='#define ISCONTIGUOUS(m) (PyArray_FLAGS(m) & +# NPY_ARRAY_C_CONTIGUOUS)' +cppmacros['PRINTPYOBJERR'] = """ +#define PRINTPYOBJERR(obj)\\ + fprintf(stderr,\"#modulename#.error is related to \");\\ + PyObject_Print((PyObject *)obj,stderr,Py_PRINT_RAW);\\ + fprintf(stderr,\"\\n\"); +""" +cppmacros['MINMAX'] = """ +#ifndef max +#define max(a,b) ((a > b) ? (a) : (b)) +#endif +#ifndef min +#define min(a,b) ((a < b) ? (a) : (b)) +#endif +#ifndef MAX +#define MAX(a,b) ((a > b) ? (a) : (b)) +#endif +#ifndef MIN +#define MIN(a,b) ((a < b) ? (a) : (b)) +#endif +""" +cppmacros['len..'] = """ +/* See fortranobject.h for definitions. The macros here are provided for BC. */ +#define rank f2py_rank +#define shape f2py_shape +#define fshape f2py_shape +#define len f2py_len +#define flen f2py_flen +#define slen f2py_slen +#define size f2py_size +""" +cppmacros['pyobj_from_char1'] = r""" +#define pyobj_from_char1(v) (PyLong_FromLong(v)) +""" +cppmacros['pyobj_from_short1'] = r""" +#define pyobj_from_short1(v) (PyLong_FromLong(v)) +""" +needs['pyobj_from_int1'] = ['signed_char'] +cppmacros['pyobj_from_int1'] = r""" +#define pyobj_from_int1(v) (PyLong_FromLong(v)) +""" +cppmacros['pyobj_from_long1'] = r""" +#define pyobj_from_long1(v) (PyLong_FromLong(v)) +""" +needs['pyobj_from_long_long1'] = ['long_long'] +cppmacros['pyobj_from_long_long1'] = """ +#ifdef HAVE_LONG_LONG +#define pyobj_from_long_long1(v) (PyLong_FromLongLong(v)) +#else +#warning HAVE_LONG_LONG is not available. Redefining pyobj_from_long_long. +#define pyobj_from_long_long1(v) (PyLong_FromLong(v)) +#endif +""" +needs['pyobj_from_long_double1'] = ['long_double'] +cppmacros['pyobj_from_long_double1'] = """ +#define pyobj_from_long_double1(v) (PyFloat_FromDouble(v))""" +cppmacros['pyobj_from_double1'] = """ +#define pyobj_from_double1(v) (PyFloat_FromDouble(v))""" +cppmacros['pyobj_from_float1'] = """ +#define pyobj_from_float1(v) (PyFloat_FromDouble(v))""" +needs['pyobj_from_complex_long_double1'] = ['complex_long_double'] +cppmacros['pyobj_from_complex_long_double1'] = """ +#define pyobj_from_complex_long_double1(v) (PyComplex_FromDoubles(v.r,v.i))""" +needs['pyobj_from_complex_double1'] = ['complex_double'] +cppmacros['pyobj_from_complex_double1'] = """ +#define pyobj_from_complex_double1(v) (PyComplex_FromDoubles(v.r,v.i))""" +needs['pyobj_from_complex_float1'] = ['complex_float'] +cppmacros['pyobj_from_complex_float1'] = """ +#define pyobj_from_complex_float1(v) (PyComplex_FromDoubles(v.r,v.i))""" +needs['pyobj_from_string1'] = ['string'] +cppmacros['pyobj_from_string1'] = """ +#define pyobj_from_string1(v) (PyUnicode_FromString((char *)v))""" +needs['pyobj_from_string1size'] = ['string'] +cppmacros['pyobj_from_string1size'] = """ +#define pyobj_from_string1size(v,len) (PyUnicode_FromStringAndSize((char *)v, len))""" +needs['TRYPYARRAYTEMPLATE'] = ['PRINTPYOBJERR'] +cppmacros['TRYPYARRAYTEMPLATE'] = """ +/* New SciPy */ +#define TRYPYARRAYTEMPLATECHAR case NPY_STRING: *(char *)(PyArray_DATA(arr))=*v; break; +#define TRYPYARRAYTEMPLATELONG case NPY_LONG: *(long *)(PyArray_DATA(arr))=*v; break; +#define TRYPYARRAYTEMPLATEOBJECT case NPY_OBJECT: PyArray_SETITEM(arr,PyArray_DATA(arr),pyobj_from_ ## ctype ## 1(*v)); break; + +#define TRYPYARRAYTEMPLATE(ctype,typecode) \\ + PyArrayObject *arr = NULL;\\ + if (!obj) return -2;\\ + if (!PyArray_Check(obj)) return -1;\\ + if (!(arr=(PyArrayObject *)obj)) {fprintf(stderr,\"TRYPYARRAYTEMPLATE:\");PRINTPYOBJERR(obj);return 0;}\\ + if (PyArray_DESCR(arr)->type==typecode) {*(ctype *)(PyArray_DATA(arr))=*v; return 1;}\\ + switch (PyArray_TYPE(arr)) {\\ + case NPY_DOUBLE: *(npy_double *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_INT: *(npy_int *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_LONG: *(npy_long *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_FLOAT: *(npy_float *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_CDOUBLE: *(npy_double *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_CFLOAT: *(npy_float *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_BOOL: *(npy_bool *)(PyArray_DATA(arr))=(*v!=0); break;\\ + case NPY_UBYTE: *(npy_ubyte *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_BYTE: *(npy_byte *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_SHORT: *(npy_short *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_USHORT: *(npy_ushort *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_UINT: *(npy_uint *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_ULONG: *(npy_ulong *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_LONGLONG: *(npy_longlong *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_ULONGLONG: *(npy_ulonglong *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_LONGDOUBLE: *(npy_longdouble *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_CLONGDOUBLE: *(npy_longdouble *)(PyArray_DATA(arr))=*v; break;\\ + case NPY_OBJECT: PyArray_SETITEM(arr, PyArray_DATA(arr), pyobj_from_ ## ctype ## 1(*v)); break;\\ + default: return -2;\\ + };\\ + return 1 +""" + +needs['TRYCOMPLEXPYARRAYTEMPLATE'] = ['PRINTPYOBJERR'] +cppmacros['TRYCOMPLEXPYARRAYTEMPLATE'] = """ +#define TRYCOMPLEXPYARRAYTEMPLATEOBJECT case NPY_OBJECT: PyArray_SETITEM(arr, PyArray_DATA(arr), pyobj_from_complex_ ## ctype ## 1((*v))); break; +#define TRYCOMPLEXPYARRAYTEMPLATE(ctype,typecode)\\ + PyArrayObject *arr = NULL;\\ + if (!obj) return -2;\\ + if (!PyArray_Check(obj)) return -1;\\ + if (!(arr=(PyArrayObject *)obj)) {fprintf(stderr,\"TRYCOMPLEXPYARRAYTEMPLATE:\");PRINTPYOBJERR(obj);return 0;}\\ + if (PyArray_DESCR(arr)->type==typecode) {\\ + *(ctype *)(PyArray_DATA(arr))=(*v).r;\\ + *(ctype *)(PyArray_DATA(arr)+sizeof(ctype))=(*v).i;\\ + return 1;\\ + }\\ + switch (PyArray_TYPE(arr)) {\\ + case NPY_CDOUBLE: *(npy_double *)(PyArray_DATA(arr))=(*v).r;\\ + *(npy_double *)(PyArray_DATA(arr)+sizeof(npy_double))=(*v).i;\\ + break;\\ + case NPY_CFLOAT: *(npy_float *)(PyArray_DATA(arr))=(*v).r;\\ + *(npy_float *)(PyArray_DATA(arr)+sizeof(npy_float))=(*v).i;\\ + break;\\ + case NPY_DOUBLE: *(npy_double *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_LONG: *(npy_long *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_FLOAT: *(npy_float *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_INT: *(npy_int *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_SHORT: *(npy_short *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_UBYTE: *(npy_ubyte *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_BYTE: *(npy_byte *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_BOOL: *(npy_bool *)(PyArray_DATA(arr))=((*v).r!=0 && (*v).i!=0); break;\\ + case NPY_USHORT: *(npy_ushort *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_UINT: *(npy_uint *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_ULONG: *(npy_ulong *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_LONGLONG: *(npy_longlong *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_ULONGLONG: *(npy_ulonglong *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_LONGDOUBLE: *(npy_longdouble *)(PyArray_DATA(arr))=(*v).r; break;\\ + case NPY_CLONGDOUBLE: *(npy_longdouble *)(PyArray_DATA(arr))=(*v).r;\\ + *(npy_longdouble *)(PyArray_DATA(arr)+sizeof(npy_longdouble))=(*v).i;\\ + break;\\ + case NPY_OBJECT: PyArray_SETITEM(arr, PyArray_DATA(arr), pyobj_from_complex_ ## ctype ## 1((*v))); break;\\ + default: return -2;\\ + };\\ + return -1; +""" +# cppmacros['NUMFROMARROBJ']=""" +# define NUMFROMARROBJ(typenum,ctype) \\ +# if (PyArray_Check(obj)) arr = (PyArrayObject *)obj;\\ +# else arr = (PyArrayObject *)PyArray_ContiguousFromObject(obj,typenum,0,0);\\ +# if (arr) {\\ +# if (PyArray_TYPE(arr)==NPY_OBJECT) {\\ +# if (!ctype ## _from_pyobj(v,(PyArray_DESCR(arr)->getitem)(PyArray_DATA(arr)),\"\"))\\ +# goto capi_fail;\\ +# } else {\\ +# (PyArray_DESCR(arr)->cast[typenum])(PyArray_DATA(arr),1,(char*)v,1,1);\\ +# }\\ +# if ((PyObject *)arr != obj) { Py_DECREF(arr); }\\ +# return 1;\\ +# } +# """ +# XXX: Note that CNUMFROMARROBJ is identical with NUMFROMARROBJ +# cppmacros['CNUMFROMARROBJ']=""" +# define CNUMFROMARROBJ(typenum,ctype) \\ +# if (PyArray_Check(obj)) arr = (PyArrayObject *)obj;\\ +# else arr = (PyArrayObject *)PyArray_ContiguousFromObject(obj,typenum,0,0);\\ +# if (arr) {\\ +# if (PyArray_TYPE(arr)==NPY_OBJECT) {\\ +# if (!ctype ## _from_pyobj(v,(PyArray_DESCR(arr)->getitem)(PyArray_DATA(arr)),\"\"))\\ +# goto capi_fail;\\ +# } else {\\ +# (PyArray_DESCR(arr)->cast[typenum])((void *)(PyArray_DATA(arr)),1,(void *)(v),1,1);\\ +# }\\ +# if ((PyObject *)arr != obj) { Py_DECREF(arr); }\\ +# return 1;\\ +# } +# """ + + +needs['GETSTRFROMPYTUPLE'] = ['STRINGCOPYN', 'PRINTPYOBJERR'] +cppmacros['GETSTRFROMPYTUPLE'] = """ +#define GETSTRFROMPYTUPLE(tuple,index,str,len) {\\ + PyObject *rv_cb_str = PyTuple_GetItem((tuple),(index));\\ + if (rv_cb_str == NULL)\\ + goto capi_fail;\\ + if (PyBytes_Check(rv_cb_str)) {\\ + str[len-1]='\\0';\\ + STRINGCOPYN((str),PyBytes_AS_STRING((PyBytesObject*)rv_cb_str),(len));\\ + } else {\\ + PRINTPYOBJERR(rv_cb_str);\\ + PyErr_SetString(#modulename#_error,\"string object expected\");\\ + goto capi_fail;\\ + }\\ + } +""" +cppmacros['GETSCALARFROMPYTUPLE'] = """ +#define GETSCALARFROMPYTUPLE(tuple,index,var,ctype,mess) {\\ + if ((capi_tmp = PyTuple_GetItem((tuple),(index)))==NULL) goto capi_fail;\\ + if (!(ctype ## _from_pyobj((var),capi_tmp,mess)))\\ + goto capi_fail;\\ + } +""" + +cppmacros['FAILNULL'] = """\ +#define FAILNULL(p) do { \\ + if ((p) == NULL) { \\ + PyErr_SetString(PyExc_MemoryError, "NULL pointer found"); \\ + goto capi_fail; \\ + } \\ +} while (0) +""" +needs['MEMCOPY'] = ['string.h', 'FAILNULL'] +cppmacros['MEMCOPY'] = """ +#define MEMCOPY(to,from,n)\\ + do { FAILNULL(to); FAILNULL(from); (void)memcpy(to,from,n); } while (0) +""" +cppmacros['STRINGMALLOC'] = """ +#define STRINGMALLOC(str,len)\\ + if ((str = (string)malloc(len+1)) == NULL) {\\ + PyErr_SetString(PyExc_MemoryError, \"out of memory\");\\ + goto capi_fail;\\ + } else {\\ + (str)[len] = '\\0';\\ + } +""" +cppmacros['STRINGFREE'] = """ +#define STRINGFREE(str) do {if (!(str == NULL)) free(str);} while (0) +""" +needs['STRINGPADN'] = ['string.h'] +cppmacros['STRINGPADN'] = """ +/* +STRINGPADN replaces null values with padding values from the right. + +`to` must have size of at least N bytes. + +If the `to[N-1]` has null value, then replace it and all the +preceding, nulls with the given padding. + +STRINGPADN(to, N, PADDING, NULLVALUE) is an inverse operation. +*/ +#define STRINGPADN(to, N, NULLVALUE, PADDING) \\ + do { \\ + int _m = (N); \\ + char *_to = (to); \\ + for (_m -= 1; _m >= 0 && _to[_m] == NULLVALUE; _m--) { \\ + _to[_m] = PADDING; \\ + } \\ + } while (0) +""" +needs['STRINGCOPYN'] = ['string.h', 'FAILNULL'] +cppmacros['STRINGCOPYN'] = """ +/* +STRINGCOPYN copies N bytes. + +`to` and `from` buffers must have sizes of at least N bytes. +*/ +#define STRINGCOPYN(to,from,N) \\ + do { \\ + int _m = (N); \\ + char *_to = (to); \\ + char *_from = (from); \\ + FAILNULL(_to); FAILNULL(_from); \\ + (void)strncpy(_to, _from, _m); \\ + } while (0) +""" +needs['STRINGCOPY'] = ['string.h', 'FAILNULL'] +cppmacros['STRINGCOPY'] = """ +#define STRINGCOPY(to,from)\\ + do { FAILNULL(to); FAILNULL(from); (void)strcpy(to,from); } while (0) +""" +cppmacros['CHECKGENERIC'] = """ +#define CHECKGENERIC(check,tcheck,name) \\ + if (!(check)) {\\ + PyErr_SetString(#modulename#_error,\"(\"tcheck\") failed for \"name);\\ + /*goto capi_fail;*/\\ + } else """ +cppmacros['CHECKARRAY'] = """ +#define CHECKARRAY(check,tcheck,name) \\ + if (!(check)) {\\ + PyErr_SetString(#modulename#_error,\"(\"tcheck\") failed for \"name);\\ + /*goto capi_fail;*/\\ + } else """ +cppmacros['CHECKSTRING'] = """ +#define CHECKSTRING(check,tcheck,name,show,var)\\ + if (!(check)) {\\ + char errstring[256];\\ + sprintf(errstring, \"%s: \"show, \"(\"tcheck\") failed for \"name, slen(var), var);\\ + PyErr_SetString(#modulename#_error, errstring);\\ + /*goto capi_fail;*/\\ + } else """ +cppmacros['CHECKSCALAR'] = """ +#define CHECKSCALAR(check,tcheck,name,show,var)\\ + if (!(check)) {\\ + char errstring[256];\\ + sprintf(errstring, \"%s: \"show, \"(\"tcheck\") failed for \"name, var);\\ + PyErr_SetString(#modulename#_error,errstring);\\ + /*goto capi_fail;*/\\ + } else """ +# cppmacros['CHECKDIMS']=""" +# define CHECKDIMS(dims,rank) \\ +# for (int i=0;i<(rank);i++)\\ +# if (dims[i]<0) {\\ +# fprintf(stderr,\"Unspecified array argument requires a complete dimension specification.\\n\");\\ +# goto capi_fail;\\ +# } +# """ +cppmacros[ + 'ARRSIZE'] = '#define ARRSIZE(dims,rank) (_PyArray_multiply_list(dims,rank))' +cppmacros['OLDPYNUM'] = """ +#ifdef OLDPYNUM +#error You need to install NumPy version 0.13 or higher. See https://scipy.org/install.html +#endif +""" +cppmacros["F2PY_THREAD_LOCAL_DECL"] = """ +#ifndef F2PY_THREAD_LOCAL_DECL +#if defined(_MSC_VER) +#define F2PY_THREAD_LOCAL_DECL __declspec(thread) +#elif defined(NPY_OS_MINGW) +#define F2PY_THREAD_LOCAL_DECL __thread +#elif defined(__STDC_VERSION__) \\ + && (__STDC_VERSION__ >= 201112L) \\ + && !defined(__STDC_NO_THREADS__) \\ + && (!defined(__GLIBC__) || __GLIBC__ > 2 || (__GLIBC__ == 2 && __GLIBC_MINOR__ > 12)) \\ + && !defined(NPY_OS_OPENBSD) && !defined(NPY_OS_HAIKU) +/* __STDC_NO_THREADS__ was first defined in a maintenance release of glibc 2.12, + see https://lists.gnu.org/archive/html/commit-hurd/2012-07/msg00180.html, + so `!defined(__STDC_NO_THREADS__)` may give false positive for the existence + of `threads.h` when using an older release of glibc 2.12 + See gh-19437 for details on OpenBSD */ +#include +#define F2PY_THREAD_LOCAL_DECL thread_local +#elif defined(__GNUC__) \\ + && (__GNUC__ > 4 || (__GNUC__ == 4 && (__GNUC_MINOR__ >= 4))) +#define F2PY_THREAD_LOCAL_DECL __thread +#endif +#endif +""" +################# C functions ############### + +cfuncs['calcarrindex'] = """ +static int calcarrindex(int *i,PyArrayObject *arr) { + int k,ii = i[0]; + for (k=1; k < PyArray_NDIM(arr); k++) + ii += (ii*(PyArray_DIM(arr,k) - 1)+i[k]); /* assuming contiguous arr */ + return ii; +}""" +cfuncs['calcarrindextr'] = """ +static int calcarrindextr(int *i,PyArrayObject *arr) { + int k,ii = i[PyArray_NDIM(arr)-1]; + for (k=1; k < PyArray_NDIM(arr); k++) + ii += (ii*(PyArray_DIM(arr,PyArray_NDIM(arr)-k-1) - 1)+i[PyArray_NDIM(arr)-k-1]); /* assuming contiguous arr */ + return ii; +}""" +cfuncs['forcomb'] = """ +static struct { int nd;npy_intp *d;int *i,*i_tr,tr; } forcombcache; +static int initforcomb(npy_intp *dims,int nd,int tr) { + int k; + if (dims==NULL) return 0; + if (nd<0) return 0; + forcombcache.nd = nd; + forcombcache.d = dims; + forcombcache.tr = tr; + if ((forcombcache.i = (int *)malloc(sizeof(int)*nd))==NULL) return 0; + if ((forcombcache.i_tr = (int *)malloc(sizeof(int)*nd))==NULL) return 0; + for (k=1;k PyArray_NBYTES(arr)) { + n = PyArray_NBYTES(arr); + } + STRINGCOPYN(buf, str, n); + return 1; + } +capi_fail: + PRINTPYOBJERR(obj); + PyErr_SetString(#modulename#_error, \"try_pyarr_from_string failed\"); + return 0; +} +""" +needs['string_from_pyobj'] = ['string', 'STRINGMALLOC', 'STRINGCOPYN'] +cfuncs['string_from_pyobj'] = """ +/* + Create a new string buffer `str` of at most length `len` from a + Python string-like object `obj`. + + The string buffer has given size (len) or the size of inistr when len==-1. + + The string buffer is padded with blanks: in Fortran, trailing blanks + are insignificant contrary to C nulls. + */ +static int +string_from_pyobj(string *str, int *len, const string inistr, PyObject *obj, + const char *errmess) +{ + PyObject *tmp = NULL; + string buf = NULL; + npy_intp n = -1; +#ifdef DEBUGCFUNCS +fprintf(stderr,\"string_from_pyobj(str='%s',len=%d,inistr='%s',obj=%p)\\n\", + (char*)str, *len, (char *)inistr, obj); +#endif + if (obj == Py_None) { + n = strlen(inistr); + buf = inistr; + } + else if (PyArray_Check(obj)) { + PyArrayObject *arr = (PyArrayObject *)obj; + if (!ISCONTIGUOUS(arr)) { + PyErr_SetString(PyExc_ValueError, + \"array object is non-contiguous.\"); + goto capi_fail; + } + n = PyArray_NBYTES(arr); + buf = PyArray_DATA(arr); + n = strnlen(buf, n); + } + else { + if (PyBytes_Check(obj)) { + tmp = obj; + Py_INCREF(tmp); + } + else if (PyUnicode_Check(obj)) { + tmp = PyUnicode_AsASCIIString(obj); + } + else { + PyObject *tmp2; + tmp2 = PyObject_Str(obj); + if (tmp2) { + tmp = PyUnicode_AsASCIIString(tmp2); + Py_DECREF(tmp2); + } + else { + tmp = NULL; + } + } + if (tmp == NULL) goto capi_fail; + n = PyBytes_GET_SIZE(tmp); + buf = PyBytes_AS_STRING(tmp); + } + if (*len == -1) { + /* TODO: change the type of `len` so that we can remove this */ + if (n > NPY_MAX_INT) { + PyErr_SetString(PyExc_OverflowError, + "object too large for a 32-bit int"); + goto capi_fail; + } + *len = n; + } + else if (*len < n) { + /* discard the last (len-n) bytes of input buf */ + n = *len; + } + if (n < 0 || *len < 0 || buf == NULL) { + goto capi_fail; + } + STRINGMALLOC(*str, *len); // *str is allocated with size (*len + 1) + if (n < *len) { + /* + Pad fixed-width string with nulls. The caller will replace + nulls with blanks when the corresponding argument is not + intent(c). + */ + memset(*str + n, '\\0', *len - n); + } + STRINGCOPYN(*str, buf, n); + Py_XDECREF(tmp); + return 1; +capi_fail: + Py_XDECREF(tmp); + { + PyObject* err = PyErr_Occurred(); + if (err == NULL) { + err = #modulename#_error; + } + PyErr_SetString(err, errmess); + } + return 0; +} +""" + +cfuncs['character_from_pyobj'] = """ +static int +character_from_pyobj(character* v, PyObject *obj, const char *errmess) { + if (PyBytes_Check(obj)) { + /* empty bytes has trailing null, so dereferencing is always safe */ + *v = PyBytes_AS_STRING(obj)[0]; + return 1; + } else if (PyUnicode_Check(obj)) { + PyObject* tmp = PyUnicode_AsASCIIString(obj); + if (tmp != NULL) { + *v = PyBytes_AS_STRING(tmp)[0]; + Py_DECREF(tmp); + return 1; + } + } else if (PyArray_Check(obj)) { + PyArrayObject* arr = (PyArrayObject*)obj; + if (F2PY_ARRAY_IS_CHARACTER_COMPATIBLE(arr)) { + *v = PyArray_BYTES(arr)[0]; + return 1; + } else if (F2PY_IS_UNICODE_ARRAY(arr)) { + // TODO: update when numpy will support 1-byte and + // 2-byte unicode dtypes + PyObject* tmp = PyUnicode_FromKindAndData( + PyUnicode_4BYTE_KIND, + PyArray_BYTES(arr), + (PyArray_NBYTES(arr)>0?1:0)); + if (tmp != NULL) { + if (character_from_pyobj(v, tmp, errmess)) { + Py_DECREF(tmp); + return 1; + } + Py_DECREF(tmp); + } + } + } else if (PySequence_Check(obj)) { + PyObject* tmp = PySequence_GetItem(obj,0); + if (tmp != NULL) { + if (character_from_pyobj(v, tmp, errmess)) { + Py_DECREF(tmp); + return 1; + } + Py_DECREF(tmp); + } + } + { + /* TODO: This error (and most other) error handling needs cleaning. */ + char mess[F2PY_MESSAGE_BUFFER_SIZE]; + strcpy(mess, errmess); + PyObject* err = PyErr_Occurred(); + if (err == NULL) { + err = PyExc_TypeError; + Py_INCREF(err); + } + else { + Py_INCREF(err); + PyErr_Clear(); + } + sprintf(mess + strlen(mess), + " -- expected str|bytes|sequence-of-str-or-bytes, got "); + f2py_describe(obj, mess + strlen(mess)); + PyErr_SetString(err, mess); + Py_DECREF(err); + } + return 0; +} +""" + +# TODO: These should be dynamically generated, too many mapped to int things, +# see note in _isocbind.py +needs['char_from_pyobj'] = ['int_from_pyobj'] +cfuncs['char_from_pyobj'] = """ +static int +char_from_pyobj(char* v, PyObject *obj, const char *errmess) { + int i = 0; + if (int_from_pyobj(&i, obj, errmess)) { + *v = (char)i; + return 1; + } + return 0; +} +""" + + +needs['signed_char_from_pyobj'] = ['int_from_pyobj', 'signed_char'] +cfuncs['signed_char_from_pyobj'] = """ +static int +signed_char_from_pyobj(signed_char* v, PyObject *obj, const char *errmess) { + int i = 0; + if (int_from_pyobj(&i, obj, errmess)) { + *v = (signed_char)i; + return 1; + } + return 0; +} +""" + + +needs['short_from_pyobj'] = ['int_from_pyobj'] +cfuncs['short_from_pyobj'] = """ +static int +short_from_pyobj(short* v, PyObject *obj, const char *errmess) { + int i = 0; + if (int_from_pyobj(&i, obj, errmess)) { + *v = (short)i; + return 1; + } + return 0; +} +""" + + +cfuncs['int_from_pyobj'] = """ +static int +int_from_pyobj(int* v, PyObject *obj, const char *errmess) +{ + PyObject* tmp = NULL; + + if (PyLong_Check(obj)) { + *v = Npy__PyLong_AsInt(obj); + return !(*v == -1 && PyErr_Occurred()); + } + + tmp = PyNumber_Long(obj); + if (tmp) { + *v = Npy__PyLong_AsInt(tmp); + Py_DECREF(tmp); + return !(*v == -1 && PyErr_Occurred()); + } + + if (PyComplex_Check(obj)) { + PyErr_Clear(); + tmp = PyObject_GetAttrString(obj,\"real\"); + } + else if (PyBytes_Check(obj) || PyUnicode_Check(obj)) { + /*pass*/; + } + else if (PySequence_Check(obj)) { + PyErr_Clear(); + tmp = PySequence_GetItem(obj, 0); + } + + if (tmp) { + if (int_from_pyobj(v, tmp, errmess)) { + Py_DECREF(tmp); + return 1; + } + Py_DECREF(tmp); + } + + { + PyObject* err = PyErr_Occurred(); + if (err == NULL) { + err = #modulename#_error; + } + PyErr_SetString(err, errmess); + } + return 0; +} +""" + + +cfuncs['long_from_pyobj'] = """ +static int +long_from_pyobj(long* v, PyObject *obj, const char *errmess) { + PyObject* tmp = NULL; + + if (PyLong_Check(obj)) { + *v = PyLong_AsLong(obj); + return !(*v == -1 && PyErr_Occurred()); + } + + tmp = PyNumber_Long(obj); + if (tmp) { + *v = PyLong_AsLong(tmp); + Py_DECREF(tmp); + return !(*v == -1 && PyErr_Occurred()); + } + + if (PyComplex_Check(obj)) { + PyErr_Clear(); + tmp = PyObject_GetAttrString(obj,\"real\"); + } + else if (PyBytes_Check(obj) || PyUnicode_Check(obj)) { + /*pass*/; + } + else if (PySequence_Check(obj)) { + PyErr_Clear(); + tmp = PySequence_GetItem(obj, 0); + } + + if (tmp) { + if (long_from_pyobj(v, tmp, errmess)) { + Py_DECREF(tmp); + return 1; + } + Py_DECREF(tmp); + } + { + PyObject* err = PyErr_Occurred(); + if (err == NULL) { + err = #modulename#_error; + } + PyErr_SetString(err, errmess); + } + return 0; +} +""" + + +needs['long_long_from_pyobj'] = ['long_long'] +cfuncs['long_long_from_pyobj'] = """ +static int +long_long_from_pyobj(long_long* v, PyObject *obj, const char *errmess) +{ + PyObject* tmp = NULL; + + if (PyLong_Check(obj)) { + *v = PyLong_AsLongLong(obj); + return !(*v == -1 && PyErr_Occurred()); + } + + tmp = PyNumber_Long(obj); + if (tmp) { + *v = PyLong_AsLongLong(tmp); + Py_DECREF(tmp); + return !(*v == -1 && PyErr_Occurred()); + } + + if (PyComplex_Check(obj)) { + PyErr_Clear(); + tmp = PyObject_GetAttrString(obj,\"real\"); + } + else if (PyBytes_Check(obj) || PyUnicode_Check(obj)) { + /*pass*/; + } + else if (PySequence_Check(obj)) { + PyErr_Clear(); + tmp = PySequence_GetItem(obj, 0); + } + + if (tmp) { + if (long_long_from_pyobj(v, tmp, errmess)) { + Py_DECREF(tmp); + return 1; + } + Py_DECREF(tmp); + } + { + PyObject* err = PyErr_Occurred(); + if (err == NULL) { + err = #modulename#_error; + } + PyErr_SetString(err,errmess); + } + return 0; +} +""" + + +needs['long_double_from_pyobj'] = ['double_from_pyobj', 'long_double'] +cfuncs['long_double_from_pyobj'] = """ +static int +long_double_from_pyobj(long_double* v, PyObject *obj, const char *errmess) +{ + double d=0; + if (PyArray_CheckScalar(obj)){ + if PyArray_IsScalar(obj, LongDouble) { + PyArray_ScalarAsCtype(obj, v); + return 1; + } + else if (PyArray_Check(obj) && PyArray_TYPE(obj) == NPY_LONGDOUBLE) { + (*v) = *((npy_longdouble *)PyArray_DATA(obj)); + return 1; + } + } + if (double_from_pyobj(&d, obj, errmess)) { + *v = (long_double)d; + return 1; + } + return 0; +} +""" + + +cfuncs['double_from_pyobj'] = """ +static int +double_from_pyobj(double* v, PyObject *obj, const char *errmess) +{ + PyObject* tmp = NULL; + if (PyFloat_Check(obj)) { + *v = PyFloat_AsDouble(obj); + return !(*v == -1.0 && PyErr_Occurred()); + } + + tmp = PyNumber_Float(obj); + if (tmp) { + *v = PyFloat_AsDouble(tmp); + Py_DECREF(tmp); + return !(*v == -1.0 && PyErr_Occurred()); + } + + if (PyComplex_Check(obj)) { + PyErr_Clear(); + tmp = PyObject_GetAttrString(obj,\"real\"); + } + else if (PyBytes_Check(obj) || PyUnicode_Check(obj)) { + /*pass*/; + } + else if (PySequence_Check(obj)) { + PyErr_Clear(); + tmp = PySequence_GetItem(obj, 0); + } + + if (tmp) { + if (double_from_pyobj(v,tmp,errmess)) {Py_DECREF(tmp); return 1;} + Py_DECREF(tmp); + } + { + PyObject* err = PyErr_Occurred(); + if (err==NULL) err = #modulename#_error; + PyErr_SetString(err,errmess); + } + return 0; +} +""" + + +needs['float_from_pyobj'] = ['double_from_pyobj'] +cfuncs['float_from_pyobj'] = """ +static int +float_from_pyobj(float* v, PyObject *obj, const char *errmess) +{ + double d=0.0; + if (double_from_pyobj(&d,obj,errmess)) { + *v = (float)d; + return 1; + } + return 0; +} +""" + + +needs['complex_long_double_from_pyobj'] = ['complex_long_double', 'long_double', + 'complex_double_from_pyobj', 'npy_math.h'] +cfuncs['complex_long_double_from_pyobj'] = """ +static int +complex_long_double_from_pyobj(complex_long_double* v, PyObject *obj, const char *errmess) +{ + complex_double cd = {0.0,0.0}; + if (PyArray_CheckScalar(obj)){ + if PyArray_IsScalar(obj, CLongDouble) { + PyArray_ScalarAsCtype(obj, v); + return 1; + } + else if (PyArray_Check(obj) && PyArray_TYPE(obj)==NPY_CLONGDOUBLE) { + (*v).r = npy_creall(*(((npy_clongdouble *)PyArray_DATA(obj)))); + (*v).i = npy_cimagl(*(((npy_clongdouble *)PyArray_DATA(obj)))); + return 1; + } + } + if (complex_double_from_pyobj(&cd,obj,errmess)) { + (*v).r = (long_double)cd.r; + (*v).i = (long_double)cd.i; + return 1; + } + return 0; +} +""" + + +needs['complex_double_from_pyobj'] = ['complex_double', 'npy_math.h'] +cfuncs['complex_double_from_pyobj'] = """ +static int +complex_double_from_pyobj(complex_double* v, PyObject *obj, const char *errmess) { + Py_complex c; + if (PyComplex_Check(obj)) { + c = PyComplex_AsCComplex(obj); + (*v).r = c.real; + (*v).i = c.imag; + return 1; + } + if (PyArray_IsScalar(obj, ComplexFloating)) { + if (PyArray_IsScalar(obj, CFloat)) { + npy_cfloat new; + PyArray_ScalarAsCtype(obj, &new); + (*v).r = (double)npy_crealf(new); + (*v).i = (double)npy_cimagf(new); + } + else if (PyArray_IsScalar(obj, CLongDouble)) { + npy_clongdouble new; + PyArray_ScalarAsCtype(obj, &new); + (*v).r = (double)npy_creall(new); + (*v).i = (double)npy_cimagl(new); + } + else { /* if (PyArray_IsScalar(obj, CDouble)) */ + PyArray_ScalarAsCtype(obj, v); + } + return 1; + } + if (PyArray_CheckScalar(obj)) { /* 0-dim array or still array scalar */ + PyArrayObject *arr; + if (PyArray_Check(obj)) { + arr = (PyArrayObject *)PyArray_Cast((PyArrayObject *)obj, NPY_CDOUBLE); + } + else { + arr = (PyArrayObject *)PyArray_FromScalar(obj, PyArray_DescrFromType(NPY_CDOUBLE)); + } + if (arr == NULL) { + return 0; + } + (*v).r = npy_creal(*(((npy_cdouble *)PyArray_DATA(arr)))); + (*v).i = npy_cimag(*(((npy_cdouble *)PyArray_DATA(arr)))); + Py_DECREF(arr); + return 1; + } + /* Python does not provide PyNumber_Complex function :-( */ + (*v).i = 0.0; + if (PyFloat_Check(obj)) { + (*v).r = PyFloat_AsDouble(obj); + return !((*v).r == -1.0 && PyErr_Occurred()); + } + if (PyLong_Check(obj)) { + (*v).r = PyLong_AsDouble(obj); + return !((*v).r == -1.0 && PyErr_Occurred()); + } + if (PySequence_Check(obj) && !(PyBytes_Check(obj) || PyUnicode_Check(obj))) { + PyObject *tmp = PySequence_GetItem(obj,0); + if (tmp) { + if (complex_double_from_pyobj(v,tmp,errmess)) { + Py_DECREF(tmp); + return 1; + } + Py_DECREF(tmp); + } + } + { + PyObject* err = PyErr_Occurred(); + if (err==NULL) + err = PyExc_TypeError; + PyErr_SetString(err,errmess); + } + return 0; +} +""" + + +needs['complex_float_from_pyobj'] = [ + 'complex_float', 'complex_double_from_pyobj'] +cfuncs['complex_float_from_pyobj'] = """ +static int +complex_float_from_pyobj(complex_float* v,PyObject *obj,const char *errmess) +{ + complex_double cd={0.0,0.0}; + if (complex_double_from_pyobj(&cd,obj,errmess)) { + (*v).r = (float)cd.r; + (*v).i = (float)cd.i; + return 1; + } + return 0; +} +""" + + +cfuncs['try_pyarr_from_character'] = """ +static int try_pyarr_from_character(PyObject* obj, character* v) { + PyArrayObject *arr = (PyArrayObject*)obj; + if (!obj) return -2; + if (PyArray_Check(obj)) { + if (F2PY_ARRAY_IS_CHARACTER_COMPATIBLE(arr)) { + *(character *)(PyArray_DATA(arr)) = *v; + return 1; + } + } + { + char mess[F2PY_MESSAGE_BUFFER_SIZE]; + PyObject* err = PyErr_Occurred(); + if (err == NULL) { + err = PyExc_ValueError; + strcpy(mess, "try_pyarr_from_character failed" + " -- expected bytes array-scalar|array, got "); + f2py_describe(obj, mess + strlen(mess)); + PyErr_SetString(err, mess); + } + } + return 0; +} +""" + +needs['try_pyarr_from_char'] = ['pyobj_from_char1', 'TRYPYARRAYTEMPLATE'] +cfuncs[ + 'try_pyarr_from_char'] = 'static int try_pyarr_from_char(PyObject* obj,char* v) {\n TRYPYARRAYTEMPLATE(char,\'c\');\n}\n' +needs['try_pyarr_from_signed_char'] = ['TRYPYARRAYTEMPLATE', 'unsigned_char'] +cfuncs[ + 'try_pyarr_from_unsigned_char'] = 'static int try_pyarr_from_unsigned_char(PyObject* obj,unsigned_char* v) {\n TRYPYARRAYTEMPLATE(unsigned_char,\'b\');\n}\n' +needs['try_pyarr_from_signed_char'] = ['TRYPYARRAYTEMPLATE', 'signed_char'] +cfuncs[ + 'try_pyarr_from_signed_char'] = 'static int try_pyarr_from_signed_char(PyObject* obj,signed_char* v) {\n TRYPYARRAYTEMPLATE(signed_char,\'1\');\n}\n' +needs['try_pyarr_from_short'] = ['pyobj_from_short1', 'TRYPYARRAYTEMPLATE'] +cfuncs[ + 'try_pyarr_from_short'] = 'static int try_pyarr_from_short(PyObject* obj,short* v) {\n TRYPYARRAYTEMPLATE(short,\'s\');\n}\n' +needs['try_pyarr_from_int'] = ['pyobj_from_int1', 'TRYPYARRAYTEMPLATE'] +cfuncs[ + 'try_pyarr_from_int'] = 'static int try_pyarr_from_int(PyObject* obj,int* v) {\n TRYPYARRAYTEMPLATE(int,\'i\');\n}\n' +needs['try_pyarr_from_long'] = ['pyobj_from_long1', 'TRYPYARRAYTEMPLATE'] +cfuncs[ + 'try_pyarr_from_long'] = 'static int try_pyarr_from_long(PyObject* obj,long* v) {\n TRYPYARRAYTEMPLATE(long,\'l\');\n}\n' +needs['try_pyarr_from_long_long'] = [ + 'pyobj_from_long_long1', 'TRYPYARRAYTEMPLATE', 'long_long'] +cfuncs[ + 'try_pyarr_from_long_long'] = 'static int try_pyarr_from_long_long(PyObject* obj,long_long* v) {\n TRYPYARRAYTEMPLATE(long_long,\'L\');\n}\n' +needs['try_pyarr_from_float'] = ['pyobj_from_float1', 'TRYPYARRAYTEMPLATE'] +cfuncs[ + 'try_pyarr_from_float'] = 'static int try_pyarr_from_float(PyObject* obj,float* v) {\n TRYPYARRAYTEMPLATE(float,\'f\');\n}\n' +needs['try_pyarr_from_double'] = ['pyobj_from_double1', 'TRYPYARRAYTEMPLATE'] +cfuncs[ + 'try_pyarr_from_double'] = 'static int try_pyarr_from_double(PyObject* obj,double* v) {\n TRYPYARRAYTEMPLATE(double,\'d\');\n}\n' +needs['try_pyarr_from_complex_float'] = [ + 'pyobj_from_complex_float1', 'TRYCOMPLEXPYARRAYTEMPLATE', 'complex_float'] +cfuncs[ + 'try_pyarr_from_complex_float'] = 'static int try_pyarr_from_complex_float(PyObject* obj,complex_float* v) {\n TRYCOMPLEXPYARRAYTEMPLATE(float,\'F\');\n}\n' +needs['try_pyarr_from_complex_double'] = [ + 'pyobj_from_complex_double1', 'TRYCOMPLEXPYARRAYTEMPLATE', 'complex_double'] +cfuncs[ + 'try_pyarr_from_complex_double'] = 'static int try_pyarr_from_complex_double(PyObject* obj,complex_double* v) {\n TRYCOMPLEXPYARRAYTEMPLATE(double,\'D\');\n}\n' + + +needs['create_cb_arglist'] = ['CFUNCSMESS', 'PRINTPYOBJERR', 'MINMAX'] +# create the list of arguments to be used when calling back to python +cfuncs['create_cb_arglist'] = """ +static int +create_cb_arglist(PyObject* fun, PyTupleObject* xa , const int maxnofargs, + const int nofoptargs, int *nofargs, PyTupleObject **args, + const char *errmess) +{ + PyObject *tmp = NULL; + PyObject *tmp_fun = NULL; + Py_ssize_t tot, opt, ext, siz, i, di = 0; + CFUNCSMESS(\"create_cb_arglist\\n\"); + tot=opt=ext=siz=0; + /* Get the total number of arguments */ + if (PyFunction_Check(fun)) { + tmp_fun = fun; + Py_INCREF(tmp_fun); + } + else { + di = 1; + if (PyObject_HasAttrString(fun,\"im_func\")) { + tmp_fun = PyObject_GetAttrString(fun,\"im_func\"); + } + else if (PyObject_HasAttrString(fun,\"__call__\")) { + tmp = PyObject_GetAttrString(fun,\"__call__\"); + if (PyObject_HasAttrString(tmp,\"im_func\")) + tmp_fun = PyObject_GetAttrString(tmp,\"im_func\"); + else { + tmp_fun = fun; /* built-in function */ + Py_INCREF(tmp_fun); + tot = maxnofargs; + if (PyCFunction_Check(fun)) { + /* In case the function has a co_argcount (like on PyPy) */ + di = 0; + } + if (xa != NULL) + tot += PyTuple_Size((PyObject *)xa); + } + Py_XDECREF(tmp); + } + else if (PyFortran_Check(fun) || PyFortran_Check1(fun)) { + tot = maxnofargs; + if (xa != NULL) + tot += PyTuple_Size((PyObject *)xa); + tmp_fun = fun; + Py_INCREF(tmp_fun); + } + else if (F2PyCapsule_Check(fun)) { + tot = maxnofargs; + if (xa != NULL) + ext = PyTuple_Size((PyObject *)xa); + if(ext>0) { + fprintf(stderr,\"extra arguments tuple cannot be used with PyCapsule call-back\\n\"); + goto capi_fail; + } + tmp_fun = fun; + Py_INCREF(tmp_fun); + } + } + + if (tmp_fun == NULL) { + fprintf(stderr, + \"Call-back argument must be function|instance|instance.__call__|f2py-function \" + \"but got %s.\\n\", + ((fun == NULL) ? \"NULL\" : Py_TYPE(fun)->tp_name)); + goto capi_fail; + } + + if (PyObject_HasAttrString(tmp_fun,\"__code__\")) { + if (PyObject_HasAttrString(tmp = PyObject_GetAttrString(tmp_fun,\"__code__\"),\"co_argcount\")) { + PyObject *tmp_argcount = PyObject_GetAttrString(tmp,\"co_argcount\"); + Py_DECREF(tmp); + if (tmp_argcount == NULL) { + goto capi_fail; + } + tot = PyLong_AsSsize_t(tmp_argcount) - di; + Py_DECREF(tmp_argcount); + } + } + /* Get the number of optional arguments */ + if (PyObject_HasAttrString(tmp_fun,\"__defaults__\")) { + if (PyTuple_Check(tmp = PyObject_GetAttrString(tmp_fun,\"__defaults__\"))) + opt = PyTuple_Size(tmp); + Py_XDECREF(tmp); + } + /* Get the number of extra arguments */ + if (xa != NULL) + ext = PyTuple_Size((PyObject *)xa); + /* Calculate the size of call-backs argument list */ + siz = MIN(maxnofargs+ext,tot); + *nofargs = MAX(0,siz-ext); + +#ifdef DEBUGCFUNCS + fprintf(stderr, + \"debug-capi:create_cb_arglist:maxnofargs(-nofoptargs),\" + \"tot,opt,ext,siz,nofargs = %d(-%d), %zd, %zd, %zd, %zd, %d\\n\", + maxnofargs, nofoptargs, tot, opt, ext, siz, *nofargs); +#endif + + if (siz < tot-opt) { + fprintf(stderr, + \"create_cb_arglist: Failed to build argument list \" + \"(siz) with enough arguments (tot-opt) required by \" + \"user-supplied function (siz,tot,opt=%zd, %zd, %zd).\\n\", + siz, tot, opt); + goto capi_fail; + } + + /* Initialize argument list */ + *args = (PyTupleObject *)PyTuple_New(siz); + for (i=0;i<*nofargs;i++) { + Py_INCREF(Py_None); + PyTuple_SET_ITEM((PyObject *)(*args),i,Py_None); + } + if (xa != NULL) + for (i=(*nofargs);i 0: + if outneeds[n][0] not in needs: + out.append(outneeds[n][0]) + del outneeds[n][0] + else: + flag = 0 + for k in outneeds[n][1:]: + if k in needs[outneeds[n][0]]: + flag = 1 + break + if flag: + outneeds[n] = outneeds[n][1:] + [outneeds[n][0]] + else: + out.append(outneeds[n][0]) + del outneeds[n][0] + if saveout and (0 not in map(lambda x, y: x == y, saveout, outneeds[n])) \ + and outneeds[n] != []: + print(n, saveout) + errmess( + 'get_needs: no progress in sorting needs, probably circular dependence, skipping.\n') + out = out + saveout + break + saveout = copy.copy(outneeds[n]) + if out == []: + out = [n] + res[n] = out + return res diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/common_rules.py b/venv/lib/python3.12/site-packages/numpy/f2py/common_rules.py new file mode 100644 index 0000000000000000000000000000000000000000..64347b737454fe1bae544b6630de2729157d7f71 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/common_rules.py @@ -0,0 +1,146 @@ +""" +Build common block mechanism for f2py2e. + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +from . import __version__ +f2py_version = __version__.version + +from .auxfuncs import ( + hasbody, hascommon, hasnote, isintent_hide, outmess, getuseblocks +) +from . import capi_maps +from . import func2subr +from .crackfortran import rmbadname + + +def findcommonblocks(block, top=1): + ret = [] + if hascommon(block): + for key, value in block['common'].items(): + vars_ = {v: block['vars'][v] for v in value} + ret.append((key, value, vars_)) + elif hasbody(block): + for b in block['body']: + ret = ret + findcommonblocks(b, 0) + if top: + tret = [] + names = [] + for t in ret: + if t[0] not in names: + names.append(t[0]) + tret.append(t) + return tret + return ret + + +def buildhooks(m): + ret = {'commonhooks': [], 'initcommonhooks': [], + 'docs': ['"COMMON blocks:\\n"']} + fwrap = [''] + + def fadd(line, s=fwrap): + s[0] = '%s\n %s' % (s[0], line) + chooks = [''] + + def cadd(line, s=chooks): + s[0] = '%s\n%s' % (s[0], line) + ihooks = [''] + + def iadd(line, s=ihooks): + s[0] = '%s\n%s' % (s[0], line) + doc = [''] + + def dadd(line, s=doc): + s[0] = '%s\n%s' % (s[0], line) + for (name, vnames, vars) in findcommonblocks(m): + lower_name = name.lower() + hnames, inames = [], [] + for n in vnames: + if isintent_hide(vars[n]): + hnames.append(n) + else: + inames.append(n) + if hnames: + outmess('\t\tConstructing COMMON block support for "%s"...\n\t\t %s\n\t\t Hidden: %s\n' % ( + name, ','.join(inames), ','.join(hnames))) + else: + outmess('\t\tConstructing COMMON block support for "%s"...\n\t\t %s\n' % ( + name, ','.join(inames))) + fadd('subroutine f2pyinit%s(setupfunc)' % name) + for usename in getuseblocks(m): + fadd(f'use {usename}') + fadd('external setupfunc') + for n in vnames: + fadd(func2subr.var2fixfortran(vars, n)) + if name == '_BLNK_': + fadd('common %s' % (','.join(vnames))) + else: + fadd('common /%s/ %s' % (name, ','.join(vnames))) + fadd('call setupfunc(%s)' % (','.join(inames))) + fadd('end\n') + cadd('static FortranDataDef f2py_%s_def[] = {' % (name)) + idims = [] + for n in inames: + ct = capi_maps.getctype(vars[n]) + elsize = capi_maps.get_elsize(vars[n]) + at = capi_maps.c2capi_map[ct] + dm = capi_maps.getarrdims(n, vars[n]) + if dm['dims']: + idims.append('(%s)' % (dm['dims'])) + else: + idims.append('') + dms = dm['dims'].strip() + if not dms: + dms = '-1' + cadd('\t{\"%s\",%s,{{%s}},%s, %s},' + % (n, dm['rank'], dms, at, elsize)) + cadd('\t{NULL}\n};') + inames1 = rmbadname(inames) + inames1_tps = ','.join(['char *' + s for s in inames1]) + cadd('static void f2py_setup_%s(%s) {' % (name, inames1_tps)) + cadd('\tint i_f2py=0;') + for n in inames1: + cadd('\tf2py_%s_def[i_f2py++].data = %s;' % (name, n)) + cadd('}') + if '_' in lower_name: + F_FUNC = 'F_FUNC_US' + else: + F_FUNC = 'F_FUNC' + cadd('extern void %s(f2pyinit%s,F2PYINIT%s)(void(*)(%s));' + % (F_FUNC, lower_name, name.upper(), + ','.join(['char*'] * len(inames1)))) + cadd('static void f2py_init_%s(void) {' % name) + cadd('\t%s(f2pyinit%s,F2PYINIT%s)(f2py_setup_%s);' + % (F_FUNC, lower_name, name.upper(), name)) + cadd('}\n') + iadd('\ttmp = PyFortranObject_New(f2py_%s_def,f2py_init_%s);' % (name, name)) + iadd('\tif (tmp == NULL) return NULL;') + iadd('\tif (F2PyDict_SetItemString(d, \"%s\", tmp) == -1) return NULL;' + % name) + iadd('\tPy_DECREF(tmp);') + tname = name.replace('_', '\\_') + dadd('\\subsection{Common block \\texttt{%s}}\n' % (tname)) + dadd('\\begin{description}') + for n in inames: + dadd('\\item[]{{}\\verb@%s@{}}' % + (capi_maps.getarrdocsign(n, vars[n]))) + if hasnote(vars[n]): + note = vars[n]['note'] + if isinstance(note, list): + note = '\n'.join(note) + dadd('--- %s' % (note)) + dadd('\\end{description}') + ret['docs'].append( + '"\t/%s/ %s\\n"' % (name, ','.join(map(lambda v, d: v + d, inames, idims)))) + ret['commonhooks'] = chooks + ret['initcommonhooks'] = ihooks + ret['latexdoc'] = doc[0] + if len(ret['docs']) <= 1: + ret['docs'] = '' + return ret, fwrap[0] diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/crackfortran.py b/venv/lib/python3.12/site-packages/numpy/f2py/crackfortran.py new file mode 100644 index 0000000000000000000000000000000000000000..2c6fa83889ca205867b6cc7b6f12dd5baa41e0a8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/crackfortran.py @@ -0,0 +1,3755 @@ +#!/usr/bin/env python3 +""" +crackfortran --- read fortran (77,90) code and extract declaration information. + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. + + +Usage of crackfortran: +====================== +Command line keys: -quiet,-verbose,-fix,-f77,-f90,-show,-h + -m ,--ignore-contains +Functions: crackfortran, crack2fortran +The following Fortran statements/constructions are supported +(or will be if needed): + block data,byte,call,character,common,complex,contains,data, + dimension,double complex,double precision,end,external,function, + implicit,integer,intent,interface,intrinsic, + logical,module,optional,parameter,private,public, + program,real,(sequence?),subroutine,type,use,virtual, + include,pythonmodule +Note: 'virtual' is mapped to 'dimension'. +Note: 'implicit integer (z) static (z)' is 'implicit static (z)' (this is minor bug). +Note: code after 'contains' will be ignored until its scope ends. +Note: 'common' statement is extended: dimensions are moved to variable definitions +Note: f2py directive: f2py is read as +Note: pythonmodule is introduced to represent Python module + +Usage: + `postlist=crackfortran(files)` + `postlist` contains declaration information read from the list of files `files`. + `crack2fortran(postlist)` returns a fortran code to be saved to pyf-file + + `postlist` has the following structure: + *** it is a list of dictionaries containing `blocks': + B = {'block','body','vars','parent_block'[,'name','prefix','args','result', + 'implicit','externals','interfaced','common','sortvars', + 'commonvars','note']} + B['block'] = 'interface' | 'function' | 'subroutine' | 'module' | + 'program' | 'block data' | 'type' | 'pythonmodule' | + 'abstract interface' + B['body'] --- list containing `subblocks' with the same structure as `blocks' + B['parent_block'] --- dictionary of a parent block: + C['body'][]['parent_block'] is C + B['vars'] --- dictionary of variable definitions + B['sortvars'] --- dictionary of variable definitions sorted by dependence (independent first) + B['name'] --- name of the block (not if B['block']=='interface') + B['prefix'] --- prefix string (only if B['block']=='function') + B['args'] --- list of argument names if B['block']== 'function' | 'subroutine' + B['result'] --- name of the return value (only if B['block']=='function') + B['implicit'] --- dictionary {'a':,'b':...} | None + B['externals'] --- list of variables being external + B['interfaced'] --- list of variables being external and defined + B['common'] --- dictionary of common blocks (list of objects) + B['commonvars'] --- list of variables used in common blocks (dimensions are moved to variable definitions) + B['from'] --- string showing the 'parents' of the current block + B['use'] --- dictionary of modules used in current block: + {:{['only':<0|1>],['map':{:,...}]}} + B['note'] --- list of LaTeX comments on the block + B['f2pyenhancements'] --- optional dictionary + {'threadsafe':'','fortranname':, + 'callstatement':|, + 'callprotoargument':, + 'usercode':|, + 'pymethoddef:' + } + B['entry'] --- dictionary {entryname:argslist,..} + B['varnames'] --- list of variable names given in the order of reading the + Fortran code, useful for derived types. + B['saved_interface'] --- a string of scanned routine signature, defines explicit interface + *** Variable definition is a dictionary + D = B['vars'][] = + {'typespec'[,'attrspec','kindselector','charselector','=','typename']} + D['typespec'] = 'byte' | 'character' | 'complex' | 'double complex' | + 'double precision' | 'integer' | 'logical' | 'real' | 'type' + D['attrspec'] --- list of attributes (e.g. 'dimension()', + 'external','intent(in|out|inout|hide|c|callback|cache|aligned4|aligned8|aligned16)', + 'optional','required', etc) + K = D['kindselector'] = {['*','kind']} (only if D['typespec'] = + 'complex' | 'integer' | 'logical' | 'real' ) + C = D['charselector'] = {['*','len','kind','f2py_len']} + (only if D['typespec']=='character') + D['='] --- initialization expression string + D['typename'] --- name of the type if D['typespec']=='type' + D['dimension'] --- list of dimension bounds + D['intent'] --- list of intent specifications + D['depend'] --- list of variable names on which current variable depends on + D['check'] --- list of C-expressions; if C-expr returns zero, exception is raised + D['note'] --- list of LaTeX comments on the variable + *** Meaning of kind/char selectors (few examples): + D['typespec>']*K['*'] + D['typespec'](kind=K['kind']) + character*C['*'] + character(len=C['len'],kind=C['kind'], f2py_len=C['f2py_len']) + (see also fortran type declaration statement formats below) + +Fortran 90 type declaration statement format (F77 is subset of F90) +==================================================================== +(Main source: IBM XL Fortran 5.1 Language Reference Manual) +type declaration = [[]::] + = byte | + character[] | + complex[] | + double complex | + double precision | + integer[] | + logical[] | + real[] | + type() + = * | + ([len=][,[kind=]]) | + (kind=[,len=]) + = * | + ([kind=]) + = comma separated list of attributes. + Only the following attributes are used in + building up the interface: + external + (parameter --- affects '=' key) + optional + intent + Other attributes are ignored. + = in | out | inout + = comma separated list of dimension bounds. + = [[*][()] | [()]*] + [// | =] [,] + +In addition, the following attributes are used: check,depend,note + +TODO: + * Apply 'parameter' attribute (e.g. 'integer parameter :: i=2' 'real x(i)' + -> 'real x(2)') + The above may be solved by creating appropriate preprocessor program, for example. + +""" +import sys +import string +import fileinput +import re +import os +import copy +import platform +import codecs +from pathlib import Path +try: + import charset_normalizer +except ImportError: + charset_normalizer = None + +from . import __version__ + +# The environment provided by auxfuncs.py is needed for some calls to eval. +# As the needed functions cannot be determined by static inspection of the +# code, it is safest to use import * pending a major refactoring of f2py. +from .auxfuncs import * +from . import symbolic + +f2py_version = __version__.version + +# Global flags: +strictf77 = 1 # Ignore `!' comments unless line[0]=='!' +sourcecodeform = 'fix' # 'fix','free' +quiet = 0 # Be verbose if 0 (Obsolete: not used any more) +verbose = 1 # Be quiet if 0, extra verbose if > 1. +tabchar = 4 * ' ' +pyffilename = '' +f77modulename = '' +skipemptyends = 0 # for old F77 programs without 'program' statement +ignorecontains = 1 +dolowercase = 1 +debug = [] + +# Global variables +beginpattern = '' +currentfilename = '' +expectbegin = 1 +f90modulevars = {} +filepositiontext = '' +gotnextfile = 1 +groupcache = None +groupcounter = 0 +grouplist = {groupcounter: []} +groupname = '' +include_paths = [] +neededmodule = -1 +onlyfuncs = [] +previous_context = None +skipblocksuntil = -1 +skipfuncs = [] +skipfunctions = [] +usermodules = [] + + +def reset_global_f2py_vars(): + global groupcounter, grouplist, neededmodule, expectbegin + global skipblocksuntil, usermodules, f90modulevars, gotnextfile + global filepositiontext, currentfilename, skipfunctions, skipfuncs + global onlyfuncs, include_paths, previous_context + global strictf77, sourcecodeform, quiet, verbose, tabchar, pyffilename + global f77modulename, skipemptyends, ignorecontains, dolowercase, debug + + # flags + strictf77 = 1 + sourcecodeform = 'fix' + quiet = 0 + verbose = 1 + tabchar = 4 * ' ' + pyffilename = '' + f77modulename = '' + skipemptyends = 0 + ignorecontains = 1 + dolowercase = 1 + debug = [] + # variables + groupcounter = 0 + grouplist = {groupcounter: []} + neededmodule = -1 + expectbegin = 1 + skipblocksuntil = -1 + usermodules = [] + f90modulevars = {} + gotnextfile = 1 + filepositiontext = '' + currentfilename = '' + skipfunctions = [] + skipfuncs = [] + onlyfuncs = [] + include_paths = [] + previous_context = None + + +def outmess(line, flag=1): + global filepositiontext + + if not verbose: + return + if not quiet: + if flag: + sys.stdout.write(filepositiontext) + sys.stdout.write(line) + +re._MAXCACHE = 50 +defaultimplicitrules = {} +for c in "abcdefghopqrstuvwxyz$_": + defaultimplicitrules[c] = {'typespec': 'real'} +for c in "ijklmn": + defaultimplicitrules[c] = {'typespec': 'integer'} +badnames = {} +invbadnames = {} +for n in ['int', 'double', 'float', 'char', 'short', 'long', 'void', 'case', 'while', + 'return', 'signed', 'unsigned', 'if', 'for', 'typedef', 'sizeof', 'union', + 'struct', 'static', 'register', 'new', 'break', 'do', 'goto', 'switch', + 'continue', 'else', 'inline', 'extern', 'delete', 'const', 'auto', + 'len', 'rank', 'shape', 'index', 'slen', 'size', '_i', + 'max', 'min', + 'flen', 'fshape', + 'string', 'complex_double', 'float_double', 'stdin', 'stderr', 'stdout', + 'type', 'default']: + badnames[n] = n + '_bn' + invbadnames[n + '_bn'] = n + + +def rmbadname1(name): + if name in badnames: + errmess('rmbadname1: Replacing "%s" with "%s".\n' % + (name, badnames[name])) + return badnames[name] + return name + + +def rmbadname(names): + return [rmbadname1(_m) for _m in names] + + +def undo_rmbadname1(name): + if name in invbadnames: + errmess('undo_rmbadname1: Replacing "%s" with "%s".\n' + % (name, invbadnames[name])) + return invbadnames[name] + return name + + +def undo_rmbadname(names): + return [undo_rmbadname1(_m) for _m in names] + + +_has_f_header = re.compile(r'-\*-\s*fortran\s*-\*-', re.I).search +_has_f90_header = re.compile(r'-\*-\s*f90\s*-\*-', re.I).search +_has_fix_header = re.compile(r'-\*-\s*fix\s*-\*-', re.I).search +_free_f90_start = re.compile(r'[^c*]\s*[^\s\d\t]', re.I).match + +# Extensions +COMMON_FREE_EXTENSIONS = ['.f90', '.f95', '.f03', '.f08'] +COMMON_FIXED_EXTENSIONS = ['.for', '.ftn', '.f77', '.f'] + + +def openhook(filename, mode): + """Ensures that filename is opened with correct encoding parameter. + + This function uses charset_normalizer package, when available, for + determining the encoding of the file to be opened. When charset_normalizer + is not available, the function detects only UTF encodings, otherwise, ASCII + encoding is used as fallback. + """ + # Reads in the entire file. Robust detection of encoding. + # Correctly handles comments or late stage unicode characters + # gh-22871 + if charset_normalizer is not None: + encoding = charset_normalizer.from_path(filename).best().encoding + else: + # hint: install charset_normalizer for correct encoding handling + # No need to read the whole file for trying with startswith + nbytes = min(32, os.path.getsize(filename)) + with open(filename, 'rb') as fhandle: + raw = fhandle.read(nbytes) + if raw.startswith(codecs.BOM_UTF8): + encoding = 'UTF-8-SIG' + elif raw.startswith((codecs.BOM_UTF32_LE, codecs.BOM_UTF32_BE)): + encoding = 'UTF-32' + elif raw.startswith((codecs.BOM_LE, codecs.BOM_BE)): + encoding = 'UTF-16' + else: + # Fallback, without charset_normalizer + encoding = 'ascii' + return open(filename, mode, encoding=encoding) + + +def is_free_format(fname): + """Check if file is in free format Fortran.""" + # f90 allows both fixed and free format, assuming fixed unless + # signs of free format are detected. + result = False + if Path(fname).suffix.lower() in COMMON_FREE_EXTENSIONS: + result = True + with openhook(fname, 'r') as fhandle: + line = fhandle.readline() + n = 15 # the number of non-comment lines to scan for hints + if _has_f_header(line): + n = 0 + elif _has_f90_header(line): + n = 0 + result = True + while n > 0 and line: + if line[0] != '!' and line.strip(): + n -= 1 + if (line[0] != '\t' and _free_f90_start(line[:5])) or line[-2:-1] == '&': + result = True + break + line = fhandle.readline() + return result + + +# Read fortran (77,90) code +def readfortrancode(ffile, dowithline=show, istop=1): + """ + Read fortran codes from files and + 1) Get rid of comments, line continuations, and empty lines; lower cases. + 2) Call dowithline(line) on every line. + 3) Recursively call itself when statement \"include ''\" is met. + """ + global gotnextfile, filepositiontext, currentfilename, sourcecodeform, strictf77 + global beginpattern, quiet, verbose, dolowercase, include_paths + + if not istop: + saveglobals = gotnextfile, filepositiontext, currentfilename, sourcecodeform, strictf77,\ + beginpattern, quiet, verbose, dolowercase + if ffile == []: + return + localdolowercase = dolowercase + # cont: set to True when the content of the last line read + # indicates statement continuation + cont = False + finalline = '' + ll = '' + includeline = re.compile( + r'\s*include\s*(\'|")(?P[^\'"]*)(\'|")', re.I) + cont1 = re.compile(r'(?P.*)&\s*\Z') + cont2 = re.compile(r'(\s*&|)(?P.*)') + mline_mark = re.compile(r".*?'''") + if istop: + dowithline('', -1) + ll, l1 = '', '' + spacedigits = [' '] + [str(_m) for _m in range(10)] + filepositiontext = '' + fin = fileinput.FileInput(ffile, openhook=openhook) + while True: + try: + l = fin.readline() + except UnicodeDecodeError as msg: + raise Exception( + f'readfortrancode: reading {fin.filename()}#{fin.lineno()}' + f' failed with\n{msg}.\nIt is likely that installing charset_normalizer' + ' package will help f2py determine the input file encoding' + ' correctly.') + if not l: + break + if fin.isfirstline(): + filepositiontext = '' + currentfilename = fin.filename() + gotnextfile = 1 + l1 = l + strictf77 = 0 + sourcecodeform = 'fix' + ext = os.path.splitext(currentfilename)[1] + if Path(currentfilename).suffix.lower() in COMMON_FIXED_EXTENSIONS and \ + not (_has_f90_header(l) or _has_fix_header(l)): + strictf77 = 1 + elif is_free_format(currentfilename) and not _has_fix_header(l): + sourcecodeform = 'free' + if strictf77: + beginpattern = beginpattern77 + else: + beginpattern = beginpattern90 + outmess('\tReading file %s (format:%s%s)\n' + % (repr(currentfilename), sourcecodeform, + strictf77 and ',strict' or '')) + + l = l.expandtabs().replace('\xa0', ' ') + # Get rid of newline characters + while not l == '': + if l[-1] not in "\n\r\f": + break + l = l[:-1] + # Unconditionally remove comments + (l, rl) = split_by_unquoted(l, '!') + l += ' ' + if rl[:5].lower() == '!f2py': # f2py directive + l, _ = split_by_unquoted(l + 4 * ' ' + rl[5:], '!') + if l.strip() == '': # Skip empty line + if sourcecodeform == 'free': + # In free form, a statement continues in the next line + # that is not a comment line [3.3.2.4^1], lines with + # blanks are comment lines [3.3.2.3^1]. Hence, the + # line continuation flag must retain its state. + pass + else: + # In fixed form, statement continuation is determined + # by a non-blank character at the 6-th position. Empty + # line indicates a start of a new statement + # [3.3.3.3^1]. Hence, the line continuation flag must + # be reset. + cont = False + continue + if sourcecodeform == 'fix': + if l[0] in ['*', 'c', '!', 'C', '#']: + if l[1:5].lower() == 'f2py': # f2py directive + l = ' ' + l[5:] + else: # Skip comment line + cont = False + continue + elif strictf77: + if len(l) > 72: + l = l[:72] + if not (l[0] in spacedigits): + raise Exception('readfortrancode: Found non-(space,digit) char ' + 'in the first column.\n\tAre you sure that ' + 'this code is in fix form?\n\tline=%s' % repr(l)) + + if (not cont or strictf77) and (len(l) > 5 and not l[5] == ' '): + # Continuation of a previous line + ll = ll + l[6:] + finalline = '' + origfinalline = '' + else: + r = cont1.match(l) + if r: + l = r.group('line') # Continuation follows .. + if cont: + ll = ll + cont2.match(l).group('line') + finalline = '' + origfinalline = '' + else: + # clean up line beginning from possible digits. + l = ' ' + l[5:] + if localdolowercase: + finalline = ll.lower() + else: + finalline = ll + origfinalline = ll + ll = l + + elif sourcecodeform == 'free': + if not cont and ext == '.pyf' and mline_mark.match(l): + l = l + '\n' + while True: + lc = fin.readline() + if not lc: + errmess( + 'Unexpected end of file when reading multiline\n') + break + l = l + lc + if mline_mark.match(lc): + break + l = l.rstrip() + r = cont1.match(l) + if r: + l = r.group('line') # Continuation follows .. + if cont: + ll = ll + cont2.match(l).group('line') + finalline = '' + origfinalline = '' + else: + if localdolowercase: + finalline = ll.lower() + else: + finalline = ll + origfinalline = ll + ll = l + cont = (r is not None) + else: + raise ValueError( + "Flag sourcecodeform must be either 'fix' or 'free': %s" % repr(sourcecodeform)) + filepositiontext = 'Line #%d in %s:"%s"\n\t' % ( + fin.filelineno() - 1, currentfilename, l1) + m = includeline.match(origfinalline) + if m: + fn = m.group('name') + if os.path.isfile(fn): + readfortrancode(fn, dowithline=dowithline, istop=0) + else: + include_dirs = [ + os.path.dirname(currentfilename)] + include_paths + foundfile = 0 + for inc_dir in include_dirs: + fn1 = os.path.join(inc_dir, fn) + if os.path.isfile(fn1): + foundfile = 1 + readfortrancode(fn1, dowithline=dowithline, istop=0) + break + if not foundfile: + outmess('readfortrancode: could not find include file %s in %s. Ignoring.\n' % ( + repr(fn), os.pathsep.join(include_dirs))) + else: + dowithline(finalline) + l1 = ll + if localdolowercase: + finalline = ll.lower() + else: + finalline = ll + origfinalline = ll + filepositiontext = 'Line #%d in %s:"%s"\n\t' % ( + fin.filelineno() - 1, currentfilename, l1) + m = includeline.match(origfinalline) + if m: + fn = m.group('name') + if os.path.isfile(fn): + readfortrancode(fn, dowithline=dowithline, istop=0) + else: + include_dirs = [os.path.dirname(currentfilename)] + include_paths + foundfile = 0 + for inc_dir in include_dirs: + fn1 = os.path.join(inc_dir, fn) + if os.path.isfile(fn1): + foundfile = 1 + readfortrancode(fn1, dowithline=dowithline, istop=0) + break + if not foundfile: + outmess('readfortrancode: could not find include file %s in %s. Ignoring.\n' % ( + repr(fn), os.pathsep.join(include_dirs))) + else: + dowithline(finalline) + filepositiontext = '' + fin.close() + if istop: + dowithline('', 1) + else: + gotnextfile, filepositiontext, currentfilename, sourcecodeform, strictf77,\ + beginpattern, quiet, verbose, dolowercase = saveglobals + +# Crack line +beforethisafter = r'\s*(?P%s(?=\s*(\b(%s)\b)))' + \ + r'\s*(?P(\b(%s)\b))' + \ + r'\s*(?P%s)\s*\Z' +## +fortrantypes = r'character|logical|integer|real|complex|double\s*(precision\s*(complex|)|complex)|type(?=\s*\([\w\s,=(*)]*\))|byte' +typespattern = re.compile( + beforethisafter % ('', fortrantypes, fortrantypes, '.*'), re.I), 'type' +typespattern4implicit = re.compile(beforethisafter % ( + '', fortrantypes + '|static|automatic|undefined', fortrantypes + '|static|automatic|undefined', '.*'), re.I) +# +functionpattern = re.compile(beforethisafter % ( + r'([a-z]+[\w\s(=*+-/)]*?|)', 'function', 'function', '.*'), re.I), 'begin' +subroutinepattern = re.compile(beforethisafter % ( + r'[a-z\s]*?', 'subroutine', 'subroutine', '.*'), re.I), 'begin' +# modulepattern=re.compile(beforethisafter%('[a-z\s]*?','module','module','.*'),re.I),'begin' +# +groupbegins77 = r'program|block\s*data' +beginpattern77 = re.compile( + beforethisafter % ('', groupbegins77, groupbegins77, '.*'), re.I), 'begin' +groupbegins90 = groupbegins77 + \ + r'|module(?!\s*procedure)|python\s*module|(abstract|)\s*interface|' + \ + r'type(?!\s*\()' +beginpattern90 = re.compile( + beforethisafter % ('', groupbegins90, groupbegins90, '.*'), re.I), 'begin' +groupends = (r'end|endprogram|endblockdata|endmodule|endpythonmodule|' + r'endinterface|endsubroutine|endfunction') +endpattern = re.compile( + beforethisafter % ('', groupends, groupends, '.*'), re.I), 'end' +# block, the Fortran 2008 construct needs special handling in the rest of the file +endifs = r'end\s*(if|do|where|select|while|forall|associate|' + \ + r'critical|enum|team)' +endifpattern = re.compile( + beforethisafter % (r'[\w]*?', endifs, endifs, '.*'), re.I), 'endif' +# +moduleprocedures = r'module\s*procedure' +moduleprocedurepattern = re.compile( + beforethisafter % ('', moduleprocedures, moduleprocedures, '.*'), re.I), \ + 'moduleprocedure' +implicitpattern = re.compile( + beforethisafter % ('', 'implicit', 'implicit', '.*'), re.I), 'implicit' +dimensionpattern = re.compile(beforethisafter % ( + '', 'dimension|virtual', 'dimension|virtual', '.*'), re.I), 'dimension' +externalpattern = re.compile( + beforethisafter % ('', 'external', 'external', '.*'), re.I), 'external' +optionalpattern = re.compile( + beforethisafter % ('', 'optional', 'optional', '.*'), re.I), 'optional' +requiredpattern = re.compile( + beforethisafter % ('', 'required', 'required', '.*'), re.I), 'required' +publicpattern = re.compile( + beforethisafter % ('', 'public', 'public', '.*'), re.I), 'public' +privatepattern = re.compile( + beforethisafter % ('', 'private', 'private', '.*'), re.I), 'private' +intrinsicpattern = re.compile( + beforethisafter % ('', 'intrinsic', 'intrinsic', '.*'), re.I), 'intrinsic' +intentpattern = re.compile(beforethisafter % ( + '', 'intent|depend|note|check', 'intent|depend|note|check', r'\s*\(.*?\).*'), re.I), 'intent' +parameterpattern = re.compile( + beforethisafter % ('', 'parameter', 'parameter', r'\s*\(.*'), re.I), 'parameter' +datapattern = re.compile( + beforethisafter % ('', 'data', 'data', '.*'), re.I), 'data' +callpattern = re.compile( + beforethisafter % ('', 'call', 'call', '.*'), re.I), 'call' +entrypattern = re.compile( + beforethisafter % ('', 'entry', 'entry', '.*'), re.I), 'entry' +callfunpattern = re.compile( + beforethisafter % ('', 'callfun', 'callfun', '.*'), re.I), 'callfun' +commonpattern = re.compile( + beforethisafter % ('', 'common', 'common', '.*'), re.I), 'common' +usepattern = re.compile( + beforethisafter % ('', 'use', 'use', '.*'), re.I), 'use' +containspattern = re.compile( + beforethisafter % ('', 'contains', 'contains', ''), re.I), 'contains' +formatpattern = re.compile( + beforethisafter % ('', 'format', 'format', '.*'), re.I), 'format' +# Non-fortran and f2py-specific statements +f2pyenhancementspattern = re.compile(beforethisafter % ('', 'threadsafe|fortranname|callstatement|callprotoargument|usercode|pymethoddef', + 'threadsafe|fortranname|callstatement|callprotoargument|usercode|pymethoddef', '.*'), re.I | re.S), 'f2pyenhancements' +multilinepattern = re.compile( + r"\s*(?P''')(?P.*?)(?P''')\s*\Z", re.S), 'multiline' +## + +def split_by_unquoted(line, characters): + """ + Splits the line into (line[:i], line[i:]), + where i is the index of first occurrence of one of the characters + not within quotes, or len(line) if no such index exists + """ + assert not (set('"\'') & set(characters)), "cannot split by unquoted quotes" + r = re.compile( + r"\A(?P({single_quoted}|{double_quoted}|{not_quoted})*)" + r"(?P{char}.*)\Z".format( + not_quoted="[^\"'{}]".format(re.escape(characters)), + char="[{}]".format(re.escape(characters)), + single_quoted=r"('([^'\\]|(\\.))*')", + double_quoted=r'("([^"\\]|(\\.))*")')) + m = r.match(line) + if m: + d = m.groupdict() + return (d["before"], d["after"]) + return (line, "") + +def _simplifyargs(argsline): + a = [] + for n in markoutercomma(argsline).split('@,@'): + for r in '(),': + n = n.replace(r, '_') + a.append(n) + return ','.join(a) + +crackline_re_1 = re.compile(r'\s*(?P\b[a-z]+\w*\b)\s*=.*', re.I) +crackline_bind_1 = re.compile(r'\s*(?P\b[a-z]+\w*\b)\s*=.*', re.I) +crackline_bindlang = re.compile(r'\s*bind\(\s*(?P[^,]+)\s*,\s*name\s*=\s*"(?P[^"]+)"\s*\)', re.I) + +def crackline(line, reset=0): + """ + reset=-1 --- initialize + reset=0 --- crack the line + reset=1 --- final check if mismatch of blocks occurred + + Cracked data is saved in grouplist[0]. + """ + global beginpattern, groupcounter, groupname, groupcache, grouplist + global filepositiontext, currentfilename, neededmodule, expectbegin + global skipblocksuntil, skipemptyends, previous_context, gotnextfile + + _, has_semicolon = split_by_unquoted(line, ";") + if has_semicolon and not (f2pyenhancementspattern[0].match(line) or + multilinepattern[0].match(line)): + # XXX: non-zero reset values need testing + assert reset == 0, repr(reset) + # split line on unquoted semicolons + line, semicolon_line = split_by_unquoted(line, ";") + while semicolon_line: + crackline(line, reset) + line, semicolon_line = split_by_unquoted(semicolon_line[1:], ";") + crackline(line, reset) + return + if reset < 0: + groupcounter = 0 + groupname = {groupcounter: ''} + groupcache = {groupcounter: {}} + grouplist = {groupcounter: []} + groupcache[groupcounter]['body'] = [] + groupcache[groupcounter]['vars'] = {} + groupcache[groupcounter]['block'] = '' + groupcache[groupcounter]['name'] = '' + neededmodule = -1 + skipblocksuntil = -1 + return + if reset > 0: + fl = 0 + if f77modulename and neededmodule == groupcounter: + fl = 2 + while groupcounter > fl: + outmess('crackline: groupcounter=%s groupname=%s\n' % + (repr(groupcounter), repr(groupname))) + outmess( + 'crackline: Mismatch of blocks encountered. Trying to fix it by assuming "end" statement.\n') + grouplist[groupcounter - 1].append(groupcache[groupcounter]) + grouplist[groupcounter - 1][-1]['body'] = grouplist[groupcounter] + del grouplist[groupcounter] + groupcounter = groupcounter - 1 + if f77modulename and neededmodule == groupcounter: + grouplist[groupcounter - 1].append(groupcache[groupcounter]) + grouplist[groupcounter - 1][-1]['body'] = grouplist[groupcounter] + del grouplist[groupcounter] + groupcounter = groupcounter - 1 # end interface + grouplist[groupcounter - 1].append(groupcache[groupcounter]) + grouplist[groupcounter - 1][-1]['body'] = grouplist[groupcounter] + del grouplist[groupcounter] + groupcounter = groupcounter - 1 # end module + neededmodule = -1 + return + if line == '': + return + flag = 0 + for pat in [dimensionpattern, externalpattern, intentpattern, optionalpattern, + requiredpattern, + parameterpattern, datapattern, publicpattern, privatepattern, + intrinsicpattern, + endifpattern, endpattern, + formatpattern, + beginpattern, functionpattern, subroutinepattern, + implicitpattern, typespattern, commonpattern, + callpattern, usepattern, containspattern, + entrypattern, + f2pyenhancementspattern, + multilinepattern, + moduleprocedurepattern + ]: + m = pat[0].match(line) + if m: + break + flag = flag + 1 + if not m: + re_1 = crackline_re_1 + if 0 <= skipblocksuntil <= groupcounter: + return + if 'externals' in groupcache[groupcounter]: + for name in groupcache[groupcounter]['externals']: + if name in invbadnames: + name = invbadnames[name] + if 'interfaced' in groupcache[groupcounter] and name in groupcache[groupcounter]['interfaced']: + continue + m1 = re.match( + r'(?P[^"]*)\b%s\b\s*@\(@(?P[^@]*)@\)@.*\Z' % name, markouterparen(line), re.I) + if m1: + m2 = re_1.match(m1.group('before')) + a = _simplifyargs(m1.group('args')) + if m2: + line = 'callfun %s(%s) result (%s)' % ( + name, a, m2.group('result')) + else: + line = 'callfun %s(%s)' % (name, a) + m = callfunpattern[0].match(line) + if not m: + outmess( + 'crackline: could not resolve function call for line=%s.\n' % repr(line)) + return + analyzeline(m, 'callfun', line) + return + if verbose > 1 or (verbose == 1 and currentfilename.lower().endswith('.pyf')): + previous_context = None + outmess('crackline:%d: No pattern for line\n' % (groupcounter)) + return + elif pat[1] == 'end': + if 0 <= skipblocksuntil < groupcounter: + groupcounter = groupcounter - 1 + if skipblocksuntil <= groupcounter: + return + if groupcounter <= 0: + raise Exception('crackline: groupcounter(=%s) is nonpositive. ' + 'Check the blocks.' + % (groupcounter)) + m1 = beginpattern[0].match((line)) + if (m1) and (not m1.group('this') == groupname[groupcounter]): + raise Exception('crackline: End group %s does not match with ' + 'previous Begin group %s\n\t%s' % + (repr(m1.group('this')), repr(groupname[groupcounter]), + filepositiontext) + ) + if skipblocksuntil == groupcounter: + skipblocksuntil = -1 + grouplist[groupcounter - 1].append(groupcache[groupcounter]) + grouplist[groupcounter - 1][-1]['body'] = grouplist[groupcounter] + del grouplist[groupcounter] + groupcounter = groupcounter - 1 + if not skipemptyends: + expectbegin = 1 + elif pat[1] == 'begin': + if 0 <= skipblocksuntil <= groupcounter: + groupcounter = groupcounter + 1 + return + gotnextfile = 0 + analyzeline(m, pat[1], line) + expectbegin = 0 + elif pat[1] == 'endif': + pass + elif pat[1] == 'moduleprocedure': + analyzeline(m, pat[1], line) + elif pat[1] == 'contains': + if ignorecontains: + return + if 0 <= skipblocksuntil <= groupcounter: + return + skipblocksuntil = groupcounter + else: + if 0 <= skipblocksuntil <= groupcounter: + return + analyzeline(m, pat[1], line) + + +def markouterparen(line): + l = '' + f = 0 + for c in line: + if c == '(': + f = f + 1 + if f == 1: + l = l + '@(@' + continue + elif c == ')': + f = f - 1 + if f == 0: + l = l + '@)@' + continue + l = l + c + return l + + +def markoutercomma(line, comma=','): + l = '' + f = 0 + before, after = split_by_unquoted(line, comma + '()') + l += before + while after: + if (after[0] == comma) and (f == 0): + l += '@' + comma + '@' + else: + l += after[0] + if after[0] == '(': + f += 1 + elif after[0] == ')': + f -= 1 + before, after = split_by_unquoted(after[1:], comma + '()') + l += before + assert not f, repr((f, line, l)) + return l + +def unmarkouterparen(line): + r = line.replace('@(@', '(').replace('@)@', ')') + return r + + +def appenddecl(decl, decl2, force=1): + if not decl: + decl = {} + if not decl2: + return decl + if decl is decl2: + return decl + for k in list(decl2.keys()): + if k == 'typespec': + if force or k not in decl: + decl[k] = decl2[k] + elif k == 'attrspec': + for l in decl2[k]: + decl = setattrspec(decl, l, force) + elif k == 'kindselector': + decl = setkindselector(decl, decl2[k], force) + elif k == 'charselector': + decl = setcharselector(decl, decl2[k], force) + elif k in ['=', 'typename']: + if force or k not in decl: + decl[k] = decl2[k] + elif k == 'note': + pass + elif k in ['intent', 'check', 'dimension', 'optional', + 'required', 'depend']: + errmess('appenddecl: "%s" not implemented.\n' % k) + else: + raise Exception('appenddecl: Unknown variable definition key: ' + + str(k)) + return decl + +selectpattern = re.compile( + r'\s*(?P(@\(@.*?@\)@|\*[\d*]+|\*\s*@\(@.*?@\)@|))(?P.*)\Z', re.I) +typedefpattern = re.compile( + r'(?:,(?P[\w(),]+))?(::)?(?P\b[a-z$_][\w$]*\b)' + r'(?:\((?P[\w,]*)\))?\Z', re.I) +nameargspattern = re.compile( + r'\s*(?P\b[\w$]+\b)\s*(@\(@\s*(?P[\w\s,]*)\s*@\)@|)\s*((result(\s*@\(@\s*(?P\b[\w$]+\b)\s*@\)@|))|(bind\s*@\(@\s*(?P(?:(?!@\)@).)*)\s*@\)@))*\s*\Z', re.I) +operatorpattern = re.compile( + r'\s*(?P(operator|assignment))' + r'@\(@\s*(?P[^)]+)\s*@\)@\s*\Z', re.I) +callnameargspattern = re.compile( + r'\s*(?P\b[\w$]+\b)\s*@\(@\s*(?P.*)\s*@\)@\s*\Z', re.I) +real16pattern = re.compile( + r'([-+]?(?:\d+(?:\.\d*)?|\d*\.\d+))[dD]((?:[-+]?\d+)?)') +real8pattern = re.compile( + r'([-+]?((?:\d+(?:\.\d*)?|\d*\.\d+))[eE]((?:[-+]?\d+)?)|(\d+\.\d*))') + +_intentcallbackpattern = re.compile(r'intent\s*\(.*?\bcallback\b', re.I) + + +def _is_intent_callback(vdecl): + for a in vdecl.get('attrspec', []): + if _intentcallbackpattern.match(a): + return 1 + return 0 + + +def _resolvetypedefpattern(line): + line = ''.join(line.split()) # removes whitespace + m1 = typedefpattern.match(line) + print(line, m1) + if m1: + attrs = m1.group('attributes') + attrs = [a.lower() for a in attrs.split(',')] if attrs else [] + return m1.group('name'), attrs, m1.group('params') + return None, [], None + +def parse_name_for_bind(line): + pattern = re.compile(r'bind\(\s*(?P[^,]+)(?:\s*,\s*name\s*=\s*["\'](?P[^"\']+)["\']\s*)?\)', re.I) + match = pattern.search(line) + bind_statement = None + if match: + bind_statement = match.group(0) + # Remove the 'bind' construct from the line. + line = line[:match.start()] + line[match.end():] + return line, bind_statement + +def _resolvenameargspattern(line): + line, bind_cname = parse_name_for_bind(line) + line = markouterparen(line) + m1 = nameargspattern.match(line) + if m1: + return m1.group('name'), m1.group('args'), m1.group('result'), bind_cname + m1 = operatorpattern.match(line) + if m1: + name = m1.group('scheme') + '(' + m1.group('name') + ')' + return name, [], None, None + m1 = callnameargspattern.match(line) + if m1: + return m1.group('name'), m1.group('args'), None, None + return None, [], None, None + + +def analyzeline(m, case, line): + """ + Reads each line in the input file in sequence and updates global vars. + + Effectively reads and collects information from the input file to the + global variable groupcache, a dictionary containing info about each part + of the fortran module. + + At the end of analyzeline, information is filtered into the correct dict + keys, but parameter values and dimensions are not yet interpreted. + """ + global groupcounter, groupname, groupcache, grouplist, filepositiontext + global currentfilename, f77modulename, neededinterface, neededmodule + global expectbegin, gotnextfile, previous_context + + block = m.group('this') + if case != 'multiline': + previous_context = None + if expectbegin and case not in ['begin', 'call', 'callfun', 'type'] \ + and not skipemptyends and groupcounter < 1: + newname = os.path.basename(currentfilename).split('.')[0] + outmess( + 'analyzeline: no group yet. Creating program group with name "%s".\n' % newname) + gotnextfile = 0 + groupcounter = groupcounter + 1 + groupname[groupcounter] = 'program' + groupcache[groupcounter] = {} + grouplist[groupcounter] = [] + groupcache[groupcounter]['body'] = [] + groupcache[groupcounter]['vars'] = {} + groupcache[groupcounter]['block'] = 'program' + groupcache[groupcounter]['name'] = newname + groupcache[groupcounter]['from'] = 'fromsky' + expectbegin = 0 + if case in ['begin', 'call', 'callfun']: + # Crack line => block,name,args,result + block = block.lower() + if re.match(r'block\s*data', block, re.I): + block = 'block data' + elif re.match(r'python\s*module', block, re.I): + block = 'python module' + elif re.match(r'abstract\s*interface', block, re.I): + block = 'abstract interface' + if block == 'type': + name, attrs, _ = _resolvetypedefpattern(m.group('after')) + groupcache[groupcounter]['vars'][name] = dict(attrspec = attrs) + args = [] + result = None + else: + name, args, result, bindcline = _resolvenameargspattern(m.group('after')) + if name is None: + if block == 'block data': + name = '_BLOCK_DATA_' + else: + name = '' + if block not in ['interface', 'block data', 'abstract interface']: + outmess('analyzeline: No name/args pattern found for line.\n') + + previous_context = (block, name, groupcounter) + if args: + args = rmbadname([x.strip() + for x in markoutercomma(args).split('@,@')]) + else: + args = [] + if '' in args: + while '' in args: + args.remove('') + outmess( + 'analyzeline: argument list is malformed (missing argument).\n') + + # end of crack line => block,name,args,result + needmodule = 0 + needinterface = 0 + + if case in ['call', 'callfun']: + needinterface = 1 + if 'args' not in groupcache[groupcounter]: + return + if name not in groupcache[groupcounter]['args']: + return + for it in grouplist[groupcounter]: + if it['name'] == name: + return + if name in groupcache[groupcounter]['interfaced']: + return + block = {'call': 'subroutine', 'callfun': 'function'}[case] + if f77modulename and neededmodule == -1 and groupcounter <= 1: + neededmodule = groupcounter + 2 + needmodule = 1 + if block not in ['interface', 'abstract interface']: + needinterface = 1 + # Create new block(s) + groupcounter = groupcounter + 1 + groupcache[groupcounter] = {} + grouplist[groupcounter] = [] + if needmodule: + if verbose > 1: + outmess('analyzeline: Creating module block %s\n' % + repr(f77modulename), 0) + groupname[groupcounter] = 'module' + groupcache[groupcounter]['block'] = 'python module' + groupcache[groupcounter]['name'] = f77modulename + groupcache[groupcounter]['from'] = '' + groupcache[groupcounter]['body'] = [] + groupcache[groupcounter]['externals'] = [] + groupcache[groupcounter]['interfaced'] = [] + groupcache[groupcounter]['vars'] = {} + groupcounter = groupcounter + 1 + groupcache[groupcounter] = {} + grouplist[groupcounter] = [] + if needinterface: + if verbose > 1: + outmess('analyzeline: Creating additional interface block (groupcounter=%s).\n' % ( + groupcounter), 0) + groupname[groupcounter] = 'interface' + groupcache[groupcounter]['block'] = 'interface' + groupcache[groupcounter]['name'] = 'unknown_interface' + groupcache[groupcounter]['from'] = '%s:%s' % ( + groupcache[groupcounter - 1]['from'], groupcache[groupcounter - 1]['name']) + groupcache[groupcounter]['body'] = [] + groupcache[groupcounter]['externals'] = [] + groupcache[groupcounter]['interfaced'] = [] + groupcache[groupcounter]['vars'] = {} + groupcounter = groupcounter + 1 + groupcache[groupcounter] = {} + grouplist[groupcounter] = [] + groupname[groupcounter] = block + groupcache[groupcounter]['block'] = block + if not name: + name = 'unknown_' + block.replace(' ', '_') + groupcache[groupcounter]['prefix'] = m.group('before') + groupcache[groupcounter]['name'] = rmbadname1(name) + groupcache[groupcounter]['result'] = result + if groupcounter == 1: + groupcache[groupcounter]['from'] = currentfilename + else: + if f77modulename and groupcounter == 3: + groupcache[groupcounter]['from'] = '%s:%s' % ( + groupcache[groupcounter - 1]['from'], currentfilename) + else: + groupcache[groupcounter]['from'] = '%s:%s' % ( + groupcache[groupcounter - 1]['from'], groupcache[groupcounter - 1]['name']) + for k in list(groupcache[groupcounter].keys()): + if not groupcache[groupcounter][k]: + del groupcache[groupcounter][k] + + groupcache[groupcounter]['args'] = args + groupcache[groupcounter]['body'] = [] + groupcache[groupcounter]['externals'] = [] + groupcache[groupcounter]['interfaced'] = [] + groupcache[groupcounter]['vars'] = {} + groupcache[groupcounter]['entry'] = {} + # end of creation + if block == 'type': + groupcache[groupcounter]['varnames'] = [] + + if case in ['call', 'callfun']: # set parents variables + if name not in groupcache[groupcounter - 2]['externals']: + groupcache[groupcounter - 2]['externals'].append(name) + groupcache[groupcounter]['vars'] = copy.deepcopy( + groupcache[groupcounter - 2]['vars']) + try: + del groupcache[groupcounter]['vars'][name][ + groupcache[groupcounter]['vars'][name]['attrspec'].index('external')] + except Exception: + pass + if block in ['function', 'subroutine']: # set global attributes + # name is fortran name + if bindcline: + bindcdat = re.search(crackline_bindlang, bindcline) + if bindcdat: + groupcache[groupcounter]['bindlang'] = {name : {}} + groupcache[groupcounter]['bindlang'][name]["lang"] = bindcdat.group('lang') + if bindcdat.group('lang_name'): + groupcache[groupcounter]['bindlang'][name]["name"] = bindcdat.group('lang_name') + try: + groupcache[groupcounter]['vars'][name] = appenddecl( + groupcache[groupcounter]['vars'][name], groupcache[groupcounter - 2]['vars']['']) + except Exception: + pass + if case == 'callfun': # return type + if result and result in groupcache[groupcounter]['vars']: + if not name == result: + groupcache[groupcounter]['vars'][name] = appenddecl( + groupcache[groupcounter]['vars'][name], groupcache[groupcounter]['vars'][result]) + # if groupcounter>1: # name is interfaced + try: + groupcache[groupcounter - 2]['interfaced'].append(name) + except Exception: + pass + if block == 'function': + t = typespattern[0].match(m.group('before') + ' ' + name) + if t: + typespec, selector, attr, edecl = cracktypespec0( + t.group('this'), t.group('after')) + updatevars(typespec, selector, attr, edecl) + + if case in ['call', 'callfun']: + grouplist[groupcounter - 1].append(groupcache[groupcounter]) + grouplist[groupcounter - 1][-1]['body'] = grouplist[groupcounter] + del grouplist[groupcounter] + groupcounter = groupcounter - 1 # end routine + grouplist[groupcounter - 1].append(groupcache[groupcounter]) + grouplist[groupcounter - 1][-1]['body'] = grouplist[groupcounter] + del grouplist[groupcounter] + groupcounter = groupcounter - 1 # end interface + + elif case == 'entry': + name, args, result, _= _resolvenameargspattern(m.group('after')) + if name is not None: + if args: + args = rmbadname([x.strip() + for x in markoutercomma(args).split('@,@')]) + else: + args = [] + assert result is None, repr(result) + groupcache[groupcounter]['entry'][name] = args + previous_context = ('entry', name, groupcounter) + elif case == 'type': + typespec, selector, attr, edecl = cracktypespec0( + block, m.group('after')) + last_name = updatevars(typespec, selector, attr, edecl) + if last_name is not None: + previous_context = ('variable', last_name, groupcounter) + elif case in ['dimension', 'intent', 'optional', 'required', 'external', 'public', 'private', 'intrinsic']: + edecl = groupcache[groupcounter]['vars'] + ll = m.group('after').strip() + i = ll.find('::') + if i < 0 and case == 'intent': + i = markouterparen(ll).find('@)@') - 2 + ll = ll[:i + 1] + '::' + ll[i + 1:] + i = ll.find('::') + if ll[i:] == '::' and 'args' in groupcache[groupcounter]: + outmess('All arguments will have attribute %s%s\n' % + (m.group('this'), ll[:i])) + ll = ll + ','.join(groupcache[groupcounter]['args']) + if i < 0: + i = 0 + pl = '' + else: + pl = ll[:i].strip() + ll = ll[i + 2:] + ch = markoutercomma(pl).split('@,@') + if len(ch) > 1: + pl = ch[0] + outmess('analyzeline: cannot handle multiple attributes without type specification. Ignoring %r.\n' % ( + ','.join(ch[1:]))) + last_name = None + + for e in [x.strip() for x in markoutercomma(ll).split('@,@')]: + m1 = namepattern.match(e) + if not m1: + if case in ['public', 'private']: + k = '' + else: + print(m.groupdict()) + outmess('analyzeline: no name pattern found in %s statement for %s. Skipping.\n' % ( + case, repr(e))) + continue + else: + k = rmbadname1(m1.group('name')) + if case in ['public', 'private'] and \ + (k == 'operator' or k == 'assignment'): + k += m1.group('after') + if k not in edecl: + edecl[k] = {} + if case == 'dimension': + ap = case + m1.group('after') + if case == 'intent': + ap = m.group('this') + pl + if _intentcallbackpattern.match(ap): + if k not in groupcache[groupcounter]['args']: + if groupcounter > 1: + if '__user__' not in groupcache[groupcounter - 2]['name']: + outmess( + 'analyzeline: missing __user__ module (could be nothing)\n') + # fixes ticket 1693 + if k != groupcache[groupcounter]['name']: + outmess('analyzeline: appending intent(callback) %s' + ' to %s arguments\n' % (k, groupcache[groupcounter]['name'])) + groupcache[groupcounter]['args'].append(k) + else: + errmess( + 'analyzeline: intent(callback) %s is ignored\n' % (k)) + else: + errmess('analyzeline: intent(callback) %s is already' + ' in argument list\n' % (k)) + if case in ['optional', 'required', 'public', 'external', 'private', 'intrinsic']: + ap = case + if 'attrspec' in edecl[k]: + edecl[k]['attrspec'].append(ap) + else: + edecl[k]['attrspec'] = [ap] + if case == 'external': + if groupcache[groupcounter]['block'] == 'program': + outmess('analyzeline: ignoring program arguments\n') + continue + if k not in groupcache[groupcounter]['args']: + continue + if 'externals' not in groupcache[groupcounter]: + groupcache[groupcounter]['externals'] = [] + groupcache[groupcounter]['externals'].append(k) + last_name = k + groupcache[groupcounter]['vars'] = edecl + if last_name is not None: + previous_context = ('variable', last_name, groupcounter) + elif case == 'moduleprocedure': + groupcache[groupcounter]['implementedby'] = \ + [x.strip() for x in m.group('after').split(',')] + elif case == 'parameter': + edecl = groupcache[groupcounter]['vars'] + ll = m.group('after').strip()[1:-1] + last_name = None + for e in markoutercomma(ll).split('@,@'): + try: + k, initexpr = [x.strip() for x in e.split('=')] + except Exception: + outmess( + 'analyzeline: could not extract name,expr in parameter statement "%s" of "%s"\n' % (e, ll)) + continue + params = get_parameters(edecl) + k = rmbadname1(k) + if k not in edecl: + edecl[k] = {} + if '=' in edecl[k] and (not edecl[k]['='] == initexpr): + outmess('analyzeline: Overwriting the value of parameter "%s" ("%s") with "%s".\n' % ( + k, edecl[k]['='], initexpr)) + t = determineexprtype(initexpr, params) + if t: + if t.get('typespec') == 'real': + tt = list(initexpr) + for m in real16pattern.finditer(initexpr): + tt[m.start():m.end()] = list( + initexpr[m.start():m.end()].lower().replace('d', 'e')) + initexpr = ''.join(tt) + elif t.get('typespec') == 'complex': + initexpr = initexpr[1:].lower().replace('d', 'e').\ + replace(',', '+1j*(') + try: + v = eval(initexpr, {}, params) + except (SyntaxError, NameError, TypeError) as msg: + errmess('analyzeline: Failed to evaluate %r. Ignoring: %s\n' + % (initexpr, msg)) + continue + edecl[k]['='] = repr(v) + if 'attrspec' in edecl[k]: + edecl[k]['attrspec'].append('parameter') + else: + edecl[k]['attrspec'] = ['parameter'] + last_name = k + groupcache[groupcounter]['vars'] = edecl + if last_name is not None: + previous_context = ('variable', last_name, groupcounter) + elif case == 'implicit': + if m.group('after').strip().lower() == 'none': + groupcache[groupcounter]['implicit'] = None + elif m.group('after'): + if 'implicit' in groupcache[groupcounter]: + impl = groupcache[groupcounter]['implicit'] + else: + impl = {} + if impl is None: + outmess( + 'analyzeline: Overwriting earlier "implicit none" statement.\n') + impl = {} + for e in markoutercomma(m.group('after')).split('@,@'): + decl = {} + m1 = re.match( + r'\s*(?P.*?)\s*(\(\s*(?P[a-z-, ]+)\s*\)\s*|)\Z', e, re.I) + if not m1: + outmess( + 'analyzeline: could not extract info of implicit statement part "%s"\n' % (e)) + continue + m2 = typespattern4implicit.match(m1.group('this')) + if not m2: + outmess( + 'analyzeline: could not extract types pattern of implicit statement part "%s"\n' % (e)) + continue + typespec, selector, attr, edecl = cracktypespec0( + m2.group('this'), m2.group('after')) + kindselect, charselect, typename = cracktypespec( + typespec, selector) + decl['typespec'] = typespec + decl['kindselector'] = kindselect + decl['charselector'] = charselect + decl['typename'] = typename + for k in list(decl.keys()): + if not decl[k]: + del decl[k] + for r in markoutercomma(m1.group('after')).split('@,@'): + if '-' in r: + try: + begc, endc = [x.strip() for x in r.split('-')] + except Exception: + outmess( + 'analyzeline: expected "-" instead of "%s" in range list of implicit statement\n' % r) + continue + else: + begc = endc = r.strip() + if not len(begc) == len(endc) == 1: + outmess( + 'analyzeline: expected "-" instead of "%s" in range list of implicit statement (2)\n' % r) + continue + for o in range(ord(begc), ord(endc) + 1): + impl[chr(o)] = decl + groupcache[groupcounter]['implicit'] = impl + elif case == 'data': + ll = [] + dl = '' + il = '' + f = 0 + fc = 1 + inp = 0 + for c in m.group('after'): + if not inp: + if c == "'": + fc = not fc + if c == '/' and fc: + f = f + 1 + continue + if c == '(': + inp = inp + 1 + elif c == ')': + inp = inp - 1 + if f == 0: + dl = dl + c + elif f == 1: + il = il + c + elif f == 2: + dl = dl.strip() + if dl.startswith(','): + dl = dl[1:].strip() + ll.append([dl, il]) + dl = c + il = '' + f = 0 + if f == 2: + dl = dl.strip() + if dl.startswith(','): + dl = dl[1:].strip() + ll.append([dl, il]) + vars = groupcache[groupcounter].get('vars', {}) + last_name = None + for l in ll: + l[0], l[1] = l[0].strip(), l[1].strip() + if l[0].startswith(','): + l[0] = l[0][1:] + if l[0].startswith('('): + outmess('analyzeline: implied-DO list "%s" is not supported. Skipping.\n' % l[0]) + continue + for idx, v in enumerate(rmbadname([x.strip() for x in markoutercomma(l[0]).split('@,@')])): + if v.startswith('('): + outmess('analyzeline: implied-DO list "%s" is not supported. Skipping.\n' % v) + # XXX: subsequent init expressions may get wrong values. + # Ignoring since data statements are irrelevant for + # wrapping. + continue + if '!' in l[1]: + # Fixes gh-24746 pyf generation + # XXX: This essentially ignores the value for generating the pyf which is fine: + # integer dimension(3) :: mytab + # common /mycom/ mytab + # Since in any case it is initialized in the Fortran code + outmess('Comment line in declaration "%s" is not supported. Skipping.\n' % l[1]) + continue + vars.setdefault(v, {}) + vtype = vars[v].get('typespec') + vdim = getdimension(vars[v]) + matches = re.findall(r"\(.*?\)", l[1]) if vtype == 'complex' else l[1].split(',') + try: + new_val = "(/{}/)".format(", ".join(matches)) if vdim else matches[idx] + except IndexError: + # gh-24746 + # Runs only if above code fails. Fixes the line + # DATA IVAR1, IVAR2, IVAR3, IVAR4, EVAR5 /4*0,0.0D0/ + # by expanding to ['0', '0', '0', '0', '0.0d0'] + if any("*" in m for m in matches): + expanded_list = [] + for match in matches: + if "*" in match: + try: + multiplier, value = match.split("*") + expanded_list.extend([value.strip()] * int(multiplier)) + except ValueError: # if int(multiplier) fails + expanded_list.append(match.strip()) + else: + expanded_list.append(match.strip()) + matches = expanded_list + new_val = "(/{}/)".format(", ".join(matches)) if vdim else matches[idx] + current_val = vars[v].get('=') + if current_val and (current_val != new_val): + outmess('analyzeline: changing init expression of "%s" ("%s") to "%s"\n' % (v, current_val, new_val)) + vars[v]['='] = new_val + last_name = v + groupcache[groupcounter]['vars'] = vars + if last_name: + previous_context = ('variable', last_name, groupcounter) + elif case == 'common': + line = m.group('after').strip() + if not line[0] == '/': + line = '//' + line + cl = [] + f = 0 + bn = '' + ol = '' + for c in line: + if c == '/': + f = f + 1 + continue + if f >= 3: + bn = bn.strip() + if not bn: + bn = '_BLNK_' + cl.append([bn, ol]) + f = f - 2 + bn = '' + ol = '' + if f % 2: + bn = bn + c + else: + ol = ol + c + bn = bn.strip() + if not bn: + bn = '_BLNK_' + cl.append([bn, ol]) + commonkey = {} + if 'common' in groupcache[groupcounter]: + commonkey = groupcache[groupcounter]['common'] + for c in cl: + if c[0] not in commonkey: + commonkey[c[0]] = [] + for i in [x.strip() for x in markoutercomma(c[1]).split('@,@')]: + if i: + commonkey[c[0]].append(i) + groupcache[groupcounter]['common'] = commonkey + previous_context = ('common', bn, groupcounter) + elif case == 'use': + m1 = re.match( + r'\A\s*(?P\b\w+\b)\s*((,(\s*\bonly\b\s*:|(?P))\s*(?P.*))|)\s*\Z', m.group('after'), re.I) + if m1: + mm = m1.groupdict() + if 'use' not in groupcache[groupcounter]: + groupcache[groupcounter]['use'] = {} + name = m1.group('name') + groupcache[groupcounter]['use'][name] = {} + isonly = 0 + if 'list' in mm and mm['list'] is not None: + if 'notonly' in mm and mm['notonly'] is None: + isonly = 1 + groupcache[groupcounter]['use'][name]['only'] = isonly + ll = [x.strip() for x in mm['list'].split(',')] + rl = {} + for l in ll: + if '=' in l: + m2 = re.match( + r'\A\s*(?P\b\w+\b)\s*=\s*>\s*(?P\b\w+\b)\s*\Z', l, re.I) + if m2: + rl[m2.group('local').strip()] = m2.group( + 'use').strip() + else: + outmess( + 'analyzeline: Not local=>use pattern found in %s\n' % repr(l)) + else: + rl[l] = l + groupcache[groupcounter]['use'][name]['map'] = rl + else: + pass + else: + print(m.groupdict()) + outmess('analyzeline: Could not crack the use statement.\n') + elif case in ['f2pyenhancements']: + if 'f2pyenhancements' not in groupcache[groupcounter]: + groupcache[groupcounter]['f2pyenhancements'] = {} + d = groupcache[groupcounter]['f2pyenhancements'] + if m.group('this') == 'usercode' and 'usercode' in d: + if isinstance(d['usercode'], str): + d['usercode'] = [d['usercode']] + d['usercode'].append(m.group('after')) + else: + d[m.group('this')] = m.group('after') + elif case == 'multiline': + if previous_context is None: + if verbose: + outmess('analyzeline: No context for multiline block.\n') + return + gc = groupcounter + appendmultiline(groupcache[gc], + previous_context[:2], + m.group('this')) + else: + if verbose > 1: + print(m.groupdict()) + outmess('analyzeline: No code implemented for line.\n') + + +def appendmultiline(group, context_name, ml): + if 'f2pymultilines' not in group: + group['f2pymultilines'] = {} + d = group['f2pymultilines'] + if context_name not in d: + d[context_name] = [] + d[context_name].append(ml) + return + + +def cracktypespec0(typespec, ll): + selector = None + attr = None + if re.match(r'double\s*complex', typespec, re.I): + typespec = 'double complex' + elif re.match(r'double\s*precision', typespec, re.I): + typespec = 'double precision' + else: + typespec = typespec.strip().lower() + m1 = selectpattern.match(markouterparen(ll)) + if not m1: + outmess( + 'cracktypespec0: no kind/char_selector pattern found for line.\n') + return + d = m1.groupdict() + for k in list(d.keys()): + d[k] = unmarkouterparen(d[k]) + if typespec in ['complex', 'integer', 'logical', 'real', 'character', 'type']: + selector = d['this'] + ll = d['after'] + i = ll.find('::') + if i >= 0: + attr = ll[:i].strip() + ll = ll[i + 2:] + return typespec, selector, attr, ll +##### +namepattern = re.compile(r'\s*(?P\b\w+\b)\s*(?P.*)\s*\Z', re.I) +kindselector = re.compile( + r'\s*(\(\s*(kind\s*=)?\s*(?P.*)\s*\)|\*\s*(?P.*?))\s*\Z', re.I) +charselector = re.compile( + r'\s*(\((?P.*)\)|\*\s*(?P.*))\s*\Z', re.I) +lenkindpattern = re.compile( + r'\s*(kind\s*=\s*(?P.*?)\s*(@,@\s*len\s*=\s*(?P.*)|)' + r'|(len\s*=\s*|)(?P.*?)\s*(@,@\s*(kind\s*=\s*|)(?P.*)' + r'|(f2py_len\s*=\s*(?P.*))|))\s*\Z', re.I) +lenarraypattern = re.compile( + r'\s*(@\(@\s*(?!/)\s*(?P.*?)\s*@\)@\s*\*\s*(?P.*?)|(\*\s*(?P.*?)|)\s*(@\(@\s*(?!/)\s*(?P.*?)\s*@\)@|))\s*(=\s*(?P.*?)|(@\(@|)/\s*(?P.*?)\s*/(@\)@|)|)\s*\Z', re.I) + + +def removespaces(expr): + expr = expr.strip() + if len(expr) <= 1: + return expr + expr2 = expr[0] + for i in range(1, len(expr) - 1): + if (expr[i] == ' ' and + ((expr[i + 1] in "()[]{}=+-/* ") or + (expr[i - 1] in "()[]{}=+-/* "))): + continue + expr2 = expr2 + expr[i] + expr2 = expr2 + expr[-1] + return expr2 + + +def markinnerspaces(line): + """ + The function replace all spaces in the input variable line which are + surrounded with quotation marks, with the triplet "@_@". + + For instance, for the input "a 'b c'" the function returns "a 'b@_@c'" + + Parameters + ---------- + line : str + + Returns + ------- + str + + """ + fragment = '' + inside = False + current_quote = None + escaped = '' + for c in line: + if escaped == '\\' and c in ['\\', '\'', '"']: + fragment += c + escaped = c + continue + if not inside and c in ['\'', '"']: + current_quote = c + if c == current_quote: + inside = not inside + elif c == ' ' and inside: + fragment += '@_@' + continue + fragment += c + escaped = c # reset to non-backslash + return fragment + + +def updatevars(typespec, selector, attrspec, entitydecl): + """ + Returns last_name, the variable name without special chars, parenthesis + or dimension specifiers. + + Alters groupcache to add the name, typespec, attrspec (and possibly value) + of current variable. + """ + global groupcache, groupcounter + + last_name = None + kindselect, charselect, typename = cracktypespec(typespec, selector) + # Clean up outer commas, whitespace and undesired chars from attrspec + if attrspec: + attrspec = [x.strip() for x in markoutercomma(attrspec).split('@,@')] + l = [] + c = re.compile(r'(?P[a-zA-Z]+)') + for a in attrspec: + if not a: + continue + m = c.match(a) + if m: + s = m.group('start').lower() + a = s + a[len(s):] + l.append(a) + attrspec = l + el = [x.strip() for x in markoutercomma(entitydecl).split('@,@')] + el1 = [] + for e in el: + for e1 in [x.strip() for x in markoutercomma(removespaces(markinnerspaces(e)), comma=' ').split('@ @')]: + if e1: + el1.append(e1.replace('@_@', ' ')) + for e in el1: + m = namepattern.match(e) + if not m: + outmess( + 'updatevars: no name pattern found for entity=%s. Skipping.\n' % (repr(e))) + continue + ename = rmbadname1(m.group('name')) + edecl = {} + if ename in groupcache[groupcounter]['vars']: + edecl = groupcache[groupcounter]['vars'][ename].copy() + not_has_typespec = 'typespec' not in edecl + if not_has_typespec: + edecl['typespec'] = typespec + elif typespec and (not typespec == edecl['typespec']): + outmess('updatevars: attempt to change the type of "%s" ("%s") to "%s". Ignoring.\n' % ( + ename, edecl['typespec'], typespec)) + if 'kindselector' not in edecl: + edecl['kindselector'] = copy.copy(kindselect) + elif kindselect: + for k in list(kindselect.keys()): + if k in edecl['kindselector'] and (not kindselect[k] == edecl['kindselector'][k]): + outmess('updatevars: attempt to change the kindselector "%s" of "%s" ("%s") to "%s". Ignoring.\n' % ( + k, ename, edecl['kindselector'][k], kindselect[k])) + else: + edecl['kindselector'][k] = copy.copy(kindselect[k]) + if 'charselector' not in edecl and charselect: + if not_has_typespec: + edecl['charselector'] = charselect + else: + errmess('updatevars:%s: attempt to change empty charselector to %r. Ignoring.\n' + % (ename, charselect)) + elif charselect: + for k in list(charselect.keys()): + if k in edecl['charselector'] and (not charselect[k] == edecl['charselector'][k]): + outmess('updatevars: attempt to change the charselector "%s" of "%s" ("%s") to "%s". Ignoring.\n' % ( + k, ename, edecl['charselector'][k], charselect[k])) + else: + edecl['charselector'][k] = copy.copy(charselect[k]) + if 'typename' not in edecl: + edecl['typename'] = typename + elif typename and (not edecl['typename'] == typename): + outmess('updatevars: attempt to change the typename of "%s" ("%s") to "%s". Ignoring.\n' % ( + ename, edecl['typename'], typename)) + if 'attrspec' not in edecl: + edecl['attrspec'] = copy.copy(attrspec) + elif attrspec: + for a in attrspec: + if a not in edecl['attrspec']: + edecl['attrspec'].append(a) + else: + edecl['typespec'] = copy.copy(typespec) + edecl['kindselector'] = copy.copy(kindselect) + edecl['charselector'] = copy.copy(charselect) + edecl['typename'] = typename + edecl['attrspec'] = copy.copy(attrspec) + if 'external' in (edecl.get('attrspec') or []) and e in groupcache[groupcounter]['args']: + if 'externals' not in groupcache[groupcounter]: + groupcache[groupcounter]['externals'] = [] + groupcache[groupcounter]['externals'].append(e) + if m.group('after'): + m1 = lenarraypattern.match(markouterparen(m.group('after'))) + if m1: + d1 = m1.groupdict() + for lk in ['len', 'array', 'init']: + if d1[lk + '2'] is not None: + d1[lk] = d1[lk + '2'] + del d1[lk + '2'] + for k in list(d1.keys()): + if d1[k] is not None: + d1[k] = unmarkouterparen(d1[k]) + else: + del d1[k] + + if 'len' in d1 and 'array' in d1: + if d1['len'] == '': + d1['len'] = d1['array'] + del d1['array'] + elif typespec == 'character': + if ('charselector' not in edecl) or (not edecl['charselector']): + edecl['charselector'] = {} + if 'len' in edecl['charselector']: + del edecl['charselector']['len'] + edecl['charselector']['*'] = d1['len'] + del d1['len'] + else: + d1['array'] = d1['array'] + ',' + d1['len'] + del d1['len'] + errmess('updatevars: "%s %s" is mapped to "%s %s(%s)"\n' % ( + typespec, e, typespec, ename, d1['array'])) + + if 'len' in d1: + if typespec in ['complex', 'integer', 'logical', 'real']: + if ('kindselector' not in edecl) or (not edecl['kindselector']): + edecl['kindselector'] = {} + edecl['kindselector']['*'] = d1['len'] + del d1['len'] + elif typespec == 'character': + if ('charselector' not in edecl) or (not edecl['charselector']): + edecl['charselector'] = {} + if 'len' in edecl['charselector']: + del edecl['charselector']['len'] + edecl['charselector']['*'] = d1['len'] + del d1['len'] + + if 'init' in d1: + if '=' in edecl and (not edecl['='] == d1['init']): + outmess('updatevars: attempt to change the init expression of "%s" ("%s") to "%s". Ignoring.\n' % ( + ename, edecl['='], d1['init'])) + else: + edecl['='] = d1['init'] + + if 'array' in d1: + dm = 'dimension(%s)' % d1['array'] + if 'attrspec' not in edecl or (not edecl['attrspec']): + edecl['attrspec'] = [dm] + else: + edecl['attrspec'].append(dm) + for dm1 in edecl['attrspec']: + if dm1[:9] == 'dimension' and dm1 != dm: + del edecl['attrspec'][-1] + errmess('updatevars:%s: attempt to change %r to %r. Ignoring.\n' + % (ename, dm1, dm)) + break + + else: + outmess('updatevars: could not crack entity declaration "%s". Ignoring.\n' % ( + ename + m.group('after'))) + for k in list(edecl.keys()): + if not edecl[k]: + del edecl[k] + groupcache[groupcounter]['vars'][ename] = edecl + if 'varnames' in groupcache[groupcounter]: + groupcache[groupcounter]['varnames'].append(ename) + last_name = ename + return last_name + + +def cracktypespec(typespec, selector): + kindselect = None + charselect = None + typename = None + if selector: + if typespec in ['complex', 'integer', 'logical', 'real']: + kindselect = kindselector.match(selector) + if not kindselect: + outmess( + 'cracktypespec: no kindselector pattern found for %s\n' % (repr(selector))) + return + kindselect = kindselect.groupdict() + kindselect['*'] = kindselect['kind2'] + del kindselect['kind2'] + for k in list(kindselect.keys()): + if not kindselect[k]: + del kindselect[k] + for k, i in list(kindselect.items()): + kindselect[k] = rmbadname1(i) + elif typespec == 'character': + charselect = charselector.match(selector) + if not charselect: + outmess( + 'cracktypespec: no charselector pattern found for %s\n' % (repr(selector))) + return + charselect = charselect.groupdict() + charselect['*'] = charselect['charlen'] + del charselect['charlen'] + if charselect['lenkind']: + lenkind = lenkindpattern.match( + markoutercomma(charselect['lenkind'])) + lenkind = lenkind.groupdict() + for lk in ['len', 'kind']: + if lenkind[lk + '2']: + lenkind[lk] = lenkind[lk + '2'] + charselect[lk] = lenkind[lk] + del lenkind[lk + '2'] + if lenkind['f2py_len'] is not None: + # used to specify the length of assumed length strings + charselect['f2py_len'] = lenkind['f2py_len'] + del charselect['lenkind'] + for k in list(charselect.keys()): + if not charselect[k]: + del charselect[k] + for k, i in list(charselect.items()): + charselect[k] = rmbadname1(i) + elif typespec == 'type': + typename = re.match(r'\s*\(\s*(?P\w+)\s*\)', selector, re.I) + if typename: + typename = typename.group('name') + else: + outmess('cracktypespec: no typename found in %s\n' % + (repr(typespec + selector))) + else: + outmess('cracktypespec: no selector used for %s\n' % + (repr(selector))) + return kindselect, charselect, typename +###### + + +def setattrspec(decl, attr, force=0): + if not decl: + decl = {} + if not attr: + return decl + if 'attrspec' not in decl: + decl['attrspec'] = [attr] + return decl + if force: + decl['attrspec'].append(attr) + if attr in decl['attrspec']: + return decl + if attr == 'static' and 'automatic' not in decl['attrspec']: + decl['attrspec'].append(attr) + elif attr == 'automatic' and 'static' not in decl['attrspec']: + decl['attrspec'].append(attr) + elif attr == 'public': + if 'private' not in decl['attrspec']: + decl['attrspec'].append(attr) + elif attr == 'private': + if 'public' not in decl['attrspec']: + decl['attrspec'].append(attr) + else: + decl['attrspec'].append(attr) + return decl + + +def setkindselector(decl, sel, force=0): + if not decl: + decl = {} + if not sel: + return decl + if 'kindselector' not in decl: + decl['kindselector'] = sel + return decl + for k in list(sel.keys()): + if force or k not in decl['kindselector']: + decl['kindselector'][k] = sel[k] + return decl + + +def setcharselector(decl, sel, force=0): + if not decl: + decl = {} + if not sel: + return decl + if 'charselector' not in decl: + decl['charselector'] = sel + return decl + + for k in list(sel.keys()): + if force or k not in decl['charselector']: + decl['charselector'][k] = sel[k] + return decl + + +def getblockname(block, unknown='unknown'): + if 'name' in block: + return block['name'] + return unknown + +# post processing + + +def setmesstext(block): + global filepositiontext + + try: + filepositiontext = 'In: %s:%s\n' % (block['from'], block['name']) + except Exception: + pass + + +def get_usedict(block): + usedict = {} + if 'parent_block' in block: + usedict = get_usedict(block['parent_block']) + if 'use' in block: + usedict.update(block['use']) + return usedict + + +def get_useparameters(block, param_map=None): + global f90modulevars + + if param_map is None: + param_map = {} + usedict = get_usedict(block) + if not usedict: + return param_map + for usename, mapping in list(usedict.items()): + usename = usename.lower() + if usename not in f90modulevars: + outmess('get_useparameters: no module %s info used by %s\n' % + (usename, block.get('name'))) + continue + mvars = f90modulevars[usename] + params = get_parameters(mvars) + if not params: + continue + # XXX: apply mapping + if mapping: + errmess('get_useparameters: mapping for %s not impl.\n' % (mapping)) + for k, v in list(params.items()): + if k in param_map: + outmess('get_useparameters: overriding parameter %s with' + ' value from module %s\n' % (repr(k), repr(usename))) + param_map[k] = v + + return param_map + + +def postcrack2(block, tab='', param_map=None): + global f90modulevars + + if not f90modulevars: + return block + if isinstance(block, list): + ret = [postcrack2(g, tab=tab + '\t', param_map=param_map) + for g in block] + return ret + setmesstext(block) + outmess('%sBlock: %s\n' % (tab, block['name']), 0) + + if param_map is None: + param_map = get_useparameters(block) + + if param_map is not None and 'vars' in block: + vars = block['vars'] + for n in list(vars.keys()): + var = vars[n] + if 'kindselector' in var: + kind = var['kindselector'] + if 'kind' in kind: + val = kind['kind'] + if val in param_map: + kind['kind'] = param_map[val] + new_body = [postcrack2(b, tab=tab + '\t', param_map=param_map) + for b in block['body']] + block['body'] = new_body + + return block + + +def postcrack(block, args=None, tab=''): + """ + TODO: + function return values + determine expression types if in argument list + """ + global usermodules, onlyfunctions + + if isinstance(block, list): + gret = [] + uret = [] + for g in block: + setmesstext(g) + g = postcrack(g, tab=tab + '\t') + # sort user routines to appear first + if 'name' in g and '__user__' in g['name']: + uret.append(g) + else: + gret.append(g) + return uret + gret + setmesstext(block) + if not isinstance(block, dict) and 'block' not in block: + raise Exception('postcrack: Expected block dictionary instead of ' + + str(block)) + if 'name' in block and not block['name'] == 'unknown_interface': + outmess('%sBlock: %s\n' % (tab, block['name']), 0) + block = analyzeargs(block) + block = analyzecommon(block) + block['vars'] = analyzevars(block) + block['sortvars'] = sortvarnames(block['vars']) + if 'args' in block and block['args']: + args = block['args'] + block['body'] = analyzebody(block, args, tab=tab) + + userisdefined = [] + if 'use' in block: + useblock = block['use'] + for k in list(useblock.keys()): + if '__user__' in k: + userisdefined.append(k) + else: + useblock = {} + name = '' + if 'name' in block: + name = block['name'] + # and not userisdefined: # Build a __user__ module + if 'externals' in block and block['externals']: + interfaced = [] + if 'interfaced' in block: + interfaced = block['interfaced'] + mvars = copy.copy(block['vars']) + if name: + mname = name + '__user__routines' + else: + mname = 'unknown__user__routines' + if mname in userisdefined: + i = 1 + while '%s_%i' % (mname, i) in userisdefined: + i = i + 1 + mname = '%s_%i' % (mname, i) + interface = {'block': 'interface', 'body': [], + 'vars': {}, 'name': name + '_user_interface'} + for e in block['externals']: + if e in interfaced: + edef = [] + j = -1 + for b in block['body']: + j = j + 1 + if b['block'] == 'interface': + i = -1 + for bb in b['body']: + i = i + 1 + if 'name' in bb and bb['name'] == e: + edef = copy.copy(bb) + del b['body'][i] + break + if edef: + if not b['body']: + del block['body'][j] + del interfaced[interfaced.index(e)] + break + interface['body'].append(edef) + else: + if e in mvars and not isexternal(mvars[e]): + interface['vars'][e] = mvars[e] + if interface['vars'] or interface['body']: + block['interfaced'] = interfaced + mblock = {'block': 'python module', 'body': [ + interface], 'vars': {}, 'name': mname, 'interfaced': block['externals']} + useblock[mname] = {} + usermodules.append(mblock) + if useblock: + block['use'] = useblock + return block + + +def sortvarnames(vars): + indep = [] + dep = [] + for v in list(vars.keys()): + if 'depend' in vars[v] and vars[v]['depend']: + dep.append(v) + else: + indep.append(v) + n = len(dep) + i = 0 + while dep: # XXX: How to catch dependence cycles correctly? + v = dep[0] + fl = 0 + for w in dep[1:]: + if w in vars[v]['depend']: + fl = 1 + break + if fl: + dep = dep[1:] + [v] + i = i + 1 + if i > n: + errmess('sortvarnames: failed to compute dependencies because' + ' of cyclic dependencies between ' + + ', '.join(dep) + '\n') + indep = indep + dep + break + else: + indep.append(v) + dep = dep[1:] + n = len(dep) + i = 0 + return indep + + +def analyzecommon(block): + if not hascommon(block): + return block + commonvars = [] + for k in list(block['common'].keys()): + comvars = [] + for e in block['common'][k]: + m = re.match( + r'\A\s*\b(?P.*?)\b\s*(\((?P.*?)\)|)\s*\Z', e, re.I) + if m: + dims = [] + if m.group('dims'): + dims = [x.strip() + for x in markoutercomma(m.group('dims')).split('@,@')] + n = rmbadname1(m.group('name').strip()) + if n in block['vars']: + if 'attrspec' in block['vars'][n]: + block['vars'][n]['attrspec'].append( + 'dimension(%s)' % (','.join(dims))) + else: + block['vars'][n]['attrspec'] = [ + 'dimension(%s)' % (','.join(dims))] + else: + if dims: + block['vars'][n] = { + 'attrspec': ['dimension(%s)' % (','.join(dims))]} + else: + block['vars'][n] = {} + if n not in commonvars: + commonvars.append(n) + else: + n = e + errmess( + 'analyzecommon: failed to extract "[()]" from "%s" in common /%s/.\n' % (e, k)) + comvars.append(n) + block['common'][k] = comvars + if 'commonvars' not in block: + block['commonvars'] = commonvars + else: + block['commonvars'] = block['commonvars'] + commonvars + return block + + +def analyzebody(block, args, tab=''): + global usermodules, skipfuncs, onlyfuncs, f90modulevars + + setmesstext(block) + + maybe_private = { + key: value + for key, value in block['vars'].items() + if 'attrspec' not in value or 'public' not in value['attrspec'] + } + + body = [] + for b in block['body']: + b['parent_block'] = block + if b['block'] in ['function', 'subroutine']: + if args is not None and b['name'] not in args: + continue + else: + as_ = b['args'] + # Add private members to skipfuncs for gh-23879 + if b['name'] in maybe_private.keys(): + skipfuncs.append(b['name']) + if b['name'] in skipfuncs: + continue + if onlyfuncs and b['name'] not in onlyfuncs: + continue + b['saved_interface'] = crack2fortrangen( + b, '\n' + ' ' * 6, as_interface=True) + + else: + as_ = args + b = postcrack(b, as_, tab=tab + '\t') + if b['block'] in ['interface', 'abstract interface'] and \ + not b['body'] and not b.get('implementedby'): + if 'f2pyenhancements' not in b: + continue + if b['block'].replace(' ', '') == 'pythonmodule': + usermodules.append(b) + else: + if b['block'] == 'module': + f90modulevars[b['name']] = b['vars'] + body.append(b) + return body + + +def buildimplicitrules(block): + setmesstext(block) + implicitrules = defaultimplicitrules + attrrules = {} + if 'implicit' in block: + if block['implicit'] is None: + implicitrules = None + if verbose > 1: + outmess( + 'buildimplicitrules: no implicit rules for routine %s.\n' % repr(block['name'])) + else: + for k in list(block['implicit'].keys()): + if block['implicit'][k].get('typespec') not in ['static', 'automatic']: + implicitrules[k] = block['implicit'][k] + else: + attrrules[k] = block['implicit'][k]['typespec'] + return implicitrules, attrrules + + +def myeval(e, g=None, l=None): + """ Like `eval` but returns only integers and floats """ + r = eval(e, g, l) + if type(r) in [int, float]: + return r + raise ValueError('r=%r' % (r)) + +getlincoef_re_1 = re.compile(r'\A\b\w+\b\Z', re.I) + + +def getlincoef(e, xset): # e = a*x+b ; x in xset + """ + Obtain ``a`` and ``b`` when ``e == "a*x+b"``, where ``x`` is a symbol in + xset. + + >>> getlincoef('2*x + 1', {'x'}) + (2, 1, 'x') + >>> getlincoef('3*x + x*2 + 2 + 1', {'x'}) + (5, 3, 'x') + >>> getlincoef('0', {'x'}) + (0, 0, None) + >>> getlincoef('0*x', {'x'}) + (0, 0, 'x') + >>> getlincoef('x*x', {'x'}) + (None, None, None) + + This can be tricked by sufficiently complex expressions + + >>> getlincoef('(x - 0.5)*(x - 1.5)*(x - 1)*x + 2*x + 3', {'x'}) + (2.0, 3.0, 'x') + """ + try: + c = int(myeval(e, {}, {})) + return 0, c, None + except Exception: + pass + if getlincoef_re_1.match(e): + return 1, 0, e + len_e = len(e) + for x in xset: + if len(x) > len_e: + continue + if re.search(r'\w\s*\([^)]*\b' + x + r'\b', e): + # skip function calls having x as an argument, e.g max(1, x) + continue + re_1 = re.compile(r'(?P.*?)\b' + x + r'\b(?P.*)', re.I) + m = re_1.match(e) + if m: + try: + m1 = re_1.match(e) + while m1: + ee = '%s(%s)%s' % ( + m1.group('before'), 0, m1.group('after')) + m1 = re_1.match(ee) + b = myeval(ee, {}, {}) + m1 = re_1.match(e) + while m1: + ee = '%s(%s)%s' % ( + m1.group('before'), 1, m1.group('after')) + m1 = re_1.match(ee) + a = myeval(ee, {}, {}) - b + m1 = re_1.match(e) + while m1: + ee = '%s(%s)%s' % ( + m1.group('before'), 0.5, m1.group('after')) + m1 = re_1.match(ee) + c = myeval(ee, {}, {}) + # computing another point to be sure that expression is linear + m1 = re_1.match(e) + while m1: + ee = '%s(%s)%s' % ( + m1.group('before'), 1.5, m1.group('after')) + m1 = re_1.match(ee) + c2 = myeval(ee, {}, {}) + if (a * 0.5 + b == c and a * 1.5 + b == c2): + return a, b, x + except Exception: + pass + break + return None, None, None + + +word_pattern = re.compile(r'\b[a-z][\w$]*\b', re.I) + + +def _get_depend_dict(name, vars, deps): + if name in vars: + words = vars[name].get('depend', []) + + if '=' in vars[name] and not isstring(vars[name]): + for word in word_pattern.findall(vars[name]['=']): + # The word_pattern may return values that are not + # only variables, they can be string content for instance + if word not in words and word in vars and word != name: + words.append(word) + for word in words[:]: + for w in deps.get(word, []) \ + or _get_depend_dict(word, vars, deps): + if w not in words: + words.append(w) + else: + outmess('_get_depend_dict: no dependence info for %s\n' % (repr(name))) + words = [] + deps[name] = words + return words + + +def _calc_depend_dict(vars): + names = list(vars.keys()) + depend_dict = {} + for n in names: + _get_depend_dict(n, vars, depend_dict) + return depend_dict + + +def get_sorted_names(vars): + depend_dict = _calc_depend_dict(vars) + names = [] + for name in list(depend_dict.keys()): + if not depend_dict[name]: + names.append(name) + del depend_dict[name] + while depend_dict: + for name, lst in list(depend_dict.items()): + new_lst = [n for n in lst if n in depend_dict] + if not new_lst: + names.append(name) + del depend_dict[name] + else: + depend_dict[name] = new_lst + return [name for name in names if name in vars] + + +def _kind_func(string): + # XXX: return something sensible. + if string[0] in "'\"": + string = string[1:-1] + if real16pattern.match(string): + return 8 + elif real8pattern.match(string): + return 4 + return 'kind(' + string + ')' + + +def _selected_int_kind_func(r): + # XXX: This should be processor dependent + m = 10 ** r + if m <= 2 ** 8: + return 1 + if m <= 2 ** 16: + return 2 + if m <= 2 ** 32: + return 4 + if m <= 2 ** 63: + return 8 + if m <= 2 ** 128: + return 16 + return -1 + + +def _selected_real_kind_func(p, r=0, radix=0): + # XXX: This should be processor dependent + # This is only verified for 0 <= p <= 20, possibly good for p <= 33 and above + if p < 7: + return 4 + if p < 16: + return 8 + machine = platform.machine().lower() + if machine.startswith(('aarch64', 'alpha', 'arm64', 'loongarch', 'mips', 'power', 'ppc', 'riscv', 's390x', 'sparc')): + if p <= 33: + return 16 + else: + if p < 19: + return 10 + elif p <= 33: + return 16 + return -1 + + +def get_parameters(vars, global_params={}): + params = copy.copy(global_params) + g_params = copy.copy(global_params) + for name, func in [('kind', _kind_func), + ('selected_int_kind', _selected_int_kind_func), + ('selected_real_kind', _selected_real_kind_func), ]: + if name not in g_params: + g_params[name] = func + param_names = [] + for n in get_sorted_names(vars): + if 'attrspec' in vars[n] and 'parameter' in vars[n]['attrspec']: + param_names.append(n) + kind_re = re.compile(r'\bkind\s*\(\s*(?P.*)\s*\)', re.I) + selected_int_kind_re = re.compile( + r'\bselected_int_kind\s*\(\s*(?P.*)\s*\)', re.I) + selected_kind_re = re.compile( + r'\bselected_(int|real)_kind\s*\(\s*(?P.*)\s*\)', re.I) + for n in param_names: + if '=' in vars[n]: + v = vars[n]['='] + if islogical(vars[n]): + v = v.lower() + for repl in [ + ('.false.', 'False'), + ('.true.', 'True'), + # TODO: test .eq., .neq., etc replacements. + ]: + v = v.replace(*repl) + + v = kind_re.sub(r'kind("\1")', v) + v = selected_int_kind_re.sub(r'selected_int_kind(\1)', v) + + # We need to act according to the data. + # The easy case is if the data has a kind-specifier, + # then we may easily remove those specifiers. + # However, it may be that the user uses other specifiers...(!) + is_replaced = False + + if 'kindselector' in vars[n]: + # Remove kind specifier (including those defined + # by parameters) + if 'kind' in vars[n]['kindselector']: + orig_v_len = len(v) + v = v.replace('_' + vars[n]['kindselector']['kind'], '') + # Again, this will be true if even a single specifier + # has been replaced, see comment above. + is_replaced = len(v) < orig_v_len + + if not is_replaced: + if not selected_kind_re.match(v): + v_ = v.split('_') + # In case there are additive parameters + if len(v_) > 1: + v = ''.join(v_[:-1]).lower().replace(v_[-1].lower(), '') + + # Currently this will not work for complex numbers. + # There is missing code for extracting a complex number, + # which may be defined in either of these: + # a) (Re, Im) + # b) cmplx(Re, Im) + # c) dcmplx(Re, Im) + # d) cmplx(Re, Im, ) + + if isdouble(vars[n]): + tt = list(v) + for m in real16pattern.finditer(v): + tt[m.start():m.end()] = list( + v[m.start():m.end()].lower().replace('d', 'e')) + v = ''.join(tt) + + elif iscomplex(vars[n]): + outmess(f'get_parameters[TODO]: ' + f'implement evaluation of complex expression {v}\n') + + dimspec = ([s.lstrip('dimension').strip() + for s in vars[n]['attrspec'] + if s.startswith('dimension')] or [None])[0] + + # Handle _dp for gh-6624 + # Also fixes gh-20460 + if real16pattern.search(v): + v = 8 + elif real8pattern.search(v): + v = 4 + try: + params[n] = param_eval(v, g_params, params, dimspec=dimspec) + except Exception as msg: + params[n] = v + outmess(f'get_parameters: got "{msg}" on {n!r}\n') + + if isstring(vars[n]) and isinstance(params[n], int): + params[n] = chr(params[n]) + nl = n.lower() + if nl != n: + params[nl] = params[n] + else: + print(vars[n]) + outmess(f'get_parameters:parameter {n!r} does not have value?!\n') + return params + + +def _eval_length(length, params): + if length in ['(:)', '(*)', '*']: + return '(*)' + return _eval_scalar(length, params) + + +_is_kind_number = re.compile(r'\d+_').match + + +def _eval_scalar(value, params): + if _is_kind_number(value): + value = value.split('_')[0] + try: + # TODO: use symbolic from PR #19805 + value = eval(value, {}, params) + value = (repr if isinstance(value, str) else str)(value) + except (NameError, SyntaxError, TypeError): + return value + except Exception as msg: + errmess('"%s" in evaluating %r ' + '(available names: %s)\n' + % (msg, value, list(params.keys()))) + return value + + +def analyzevars(block): + """ + Sets correct dimension information for each variable/parameter + """ + + global f90modulevars + + setmesstext(block) + implicitrules, attrrules = buildimplicitrules(block) + vars = copy.copy(block['vars']) + if block['block'] == 'function' and block['name'] not in vars: + vars[block['name']] = {} + if '' in block['vars']: + del vars[''] + if 'attrspec' in block['vars']['']: + gen = block['vars']['']['attrspec'] + for n in set(vars) | set(b['name'] for b in block['body']): + for k in ['public', 'private']: + if k in gen: + vars[n] = setattrspec(vars.get(n, {}), k) + svars = [] + args = block['args'] + for a in args: + try: + vars[a] + svars.append(a) + except KeyError: + pass + for n in list(vars.keys()): + if n not in args: + svars.append(n) + + params = get_parameters(vars, get_useparameters(block)) + # At this point, params are read and interpreted, but + # the params used to define vars are not yet parsed + dep_matches = {} + name_match = re.compile(r'[A-Za-z][\w$]*').match + for v in list(vars.keys()): + m = name_match(v) + if m: + n = v[m.start():m.end()] + try: + dep_matches[n] + except KeyError: + dep_matches[n] = re.compile(r'.*\b%s\b' % (v), re.I).match + for n in svars: + if n[0] in list(attrrules.keys()): + vars[n] = setattrspec(vars[n], attrrules[n[0]]) + if 'typespec' not in vars[n]: + if not('attrspec' in vars[n] and 'external' in vars[n]['attrspec']): + if implicitrules: + ln0 = n[0].lower() + for k in list(implicitrules[ln0].keys()): + if k == 'typespec' and implicitrules[ln0][k] == 'undefined': + continue + if k not in vars[n]: + vars[n][k] = implicitrules[ln0][k] + elif k == 'attrspec': + for l in implicitrules[ln0][k]: + vars[n] = setattrspec(vars[n], l) + elif n in block['args']: + outmess('analyzevars: typespec of variable %s is not defined in routine %s.\n' % ( + repr(n), block['name'])) + if 'charselector' in vars[n]: + if 'len' in vars[n]['charselector']: + l = vars[n]['charselector']['len'] + try: + l = str(eval(l, {}, params)) + except Exception: + pass + vars[n]['charselector']['len'] = l + + if 'kindselector' in vars[n]: + if 'kind' in vars[n]['kindselector']: + l = vars[n]['kindselector']['kind'] + try: + l = str(eval(l, {}, params)) + except Exception: + pass + vars[n]['kindselector']['kind'] = l + + dimension_exprs = {} + if 'attrspec' in vars[n]: + attr = vars[n]['attrspec'] + attr.reverse() + vars[n]['attrspec'] = [] + dim, intent, depend, check, note = None, None, None, None, None + for a in attr: + if a[:9] == 'dimension': + dim = (a[9:].strip())[1:-1] + elif a[:6] == 'intent': + intent = (a[6:].strip())[1:-1] + elif a[:6] == 'depend': + depend = (a[6:].strip())[1:-1] + elif a[:5] == 'check': + check = (a[5:].strip())[1:-1] + elif a[:4] == 'note': + note = (a[4:].strip())[1:-1] + else: + vars[n] = setattrspec(vars[n], a) + if intent: + if 'intent' not in vars[n]: + vars[n]['intent'] = [] + for c in [x.strip() for x in markoutercomma(intent).split('@,@')]: + # Remove spaces so that 'in out' becomes 'inout' + tmp = c.replace(' ', '') + if tmp not in vars[n]['intent']: + vars[n]['intent'].append(tmp) + intent = None + if note: + note = note.replace('\\n\\n', '\n\n') + note = note.replace('\\n ', '\n') + if 'note' not in vars[n]: + vars[n]['note'] = [note] + else: + vars[n]['note'].append(note) + note = None + if depend is not None: + if 'depend' not in vars[n]: + vars[n]['depend'] = [] + for c in rmbadname([x.strip() for x in markoutercomma(depend).split('@,@')]): + if c not in vars[n]['depend']: + vars[n]['depend'].append(c) + depend = None + if check is not None: + if 'check' not in vars[n]: + vars[n]['check'] = [] + for c in [x.strip() for x in markoutercomma(check).split('@,@')]: + if c not in vars[n]['check']: + vars[n]['check'].append(c) + check = None + if dim and 'dimension' not in vars[n]: + vars[n]['dimension'] = [] + for d in rmbadname( + [x.strip() for x in markoutercomma(dim).split('@,@')] + ): + # d is the expression inside the dimension declaration + # Evaluate `d` with respect to params + try: + # the dimension for this variable depends on a + # previously defined parameter + d = param_parse(d, params) + except (ValueError, IndexError, KeyError): + outmess( + ('analyzevars: could not parse dimension for ' + f'variable {d!r}\n') + ) + + dim_char = ':' if d == ':' else '*' + if d == dim_char: + dl = [dim_char] + else: + dl = markoutercomma(d, ':').split('@:@') + if len(dl) == 2 and '*' in dl: # e.g. dimension(5:*) + dl = ['*'] + d = '*' + if len(dl) == 1 and dl[0] != dim_char: + dl = ['1', dl[0]] + if len(dl) == 2: + d1, d2 = map(symbolic.Expr.parse, dl) + dsize = d2 - d1 + 1 + d = dsize.tostring(language=symbolic.Language.C) + # find variables v that define d as a linear + # function, `d == a * v + b`, and store + # coefficients a and b for further analysis. + solver_and_deps = {} + for v in block['vars']: + s = symbolic.as_symbol(v) + if dsize.contains(s): + try: + a, b = dsize.linear_solve(s) + + def solve_v(s, a=a, b=b): + return (s - b) / a + + all_symbols = set(a.symbols()) + all_symbols.update(b.symbols()) + except RuntimeError as msg: + # d is not a linear function of v, + # however, if v can be determined + # from d using other means, + # implement the corresponding + # solve_v function here. + solve_v = None + all_symbols = set(dsize.symbols()) + v_deps = set( + s.data for s in all_symbols + if s.data in vars) + solver_and_deps[v] = solve_v, list(v_deps) + # Note that dsize may contain symbols that are + # not defined in block['vars']. Here we assume + # these correspond to Fortran/C intrinsic + # functions or that are defined by other + # means. We'll let the compiler validate the + # definiteness of such symbols. + dimension_exprs[d] = solver_and_deps + vars[n]['dimension'].append(d) + + if 'check' not in vars[n] and 'args' in block and n in block['args']: + # n is an argument that has no checks defined. Here we + # generate some consistency checks for n, and when n is an + # array, generate checks for its dimensions and construct + # initialization expressions. + n_deps = vars[n].get('depend', []) + n_checks = [] + n_is_input = l_or(isintent_in, isintent_inout, + isintent_inplace)(vars[n]) + if isarray(vars[n]): # n is array + for i, d in enumerate(vars[n]['dimension']): + coeffs_and_deps = dimension_exprs.get(d) + if coeffs_and_deps is None: + # d is `:` or `*` or a constant expression + pass + elif n_is_input: + # n is an input array argument and its shape + # may define variables used in dimension + # specifications. + for v, (solver, deps) in coeffs_and_deps.items(): + def compute_deps(v, deps): + for v1 in coeffs_and_deps.get(v, [None, []])[1]: + if v1 not in deps: + deps.add(v1) + compute_deps(v1, deps) + all_deps = set() + compute_deps(v, all_deps) + if ((v in n_deps + or '=' in vars[v] + or 'depend' in vars[v])): + # Skip a variable that + # - n depends on + # - has user-defined initialization expression + # - has user-defined dependencies + continue + if solver is not None and v not in all_deps: + # v can be solved from d, hence, we + # make it an optional argument with + # initialization expression: + is_required = False + init = solver(symbolic.as_symbol( + f'shape({n}, {i})')) + init = init.tostring( + language=symbolic.Language.C) + vars[v]['='] = init + # n needs to be initialized before v. So, + # making v dependent on n and on any + # variables in solver or d. + vars[v]['depend'] = [n] + deps + if 'check' not in vars[v]: + # add check only when no + # user-specified checks exist + vars[v]['check'] = [ + f'shape({n}, {i}) == {d}'] + else: + # d is a non-linear function on v, + # hence, v must be a required input + # argument that n will depend on + is_required = True + if 'intent' not in vars[v]: + vars[v]['intent'] = [] + if 'in' not in vars[v]['intent']: + vars[v]['intent'].append('in') + # v needs to be initialized before n + n_deps.append(v) + n_checks.append( + f'shape({n}, {i}) == {d}') + v_attr = vars[v].get('attrspec', []) + if not ('optional' in v_attr + or 'required' in v_attr): + v_attr.append( + 'required' if is_required else 'optional') + if v_attr: + vars[v]['attrspec'] = v_attr + if coeffs_and_deps is not None: + # extend v dependencies with ones specified in attrspec + for v, (solver, deps) in coeffs_and_deps.items(): + v_deps = vars[v].get('depend', []) + for aa in vars[v].get('attrspec', []): + if aa.startswith('depend'): + aa = ''.join(aa.split()) + v_deps.extend(aa[7:-1].split(',')) + if v_deps: + vars[v]['depend'] = list(set(v_deps)) + if n not in v_deps: + n_deps.append(v) + elif isstring(vars[n]): + if 'charselector' in vars[n]: + if '*' in vars[n]['charselector']: + length = _eval_length(vars[n]['charselector']['*'], + params) + vars[n]['charselector']['*'] = length + elif 'len' in vars[n]['charselector']: + length = _eval_length(vars[n]['charselector']['len'], + params) + del vars[n]['charselector']['len'] + vars[n]['charselector']['*'] = length + if n_checks: + vars[n]['check'] = n_checks + if n_deps: + vars[n]['depend'] = list(set(n_deps)) + + if '=' in vars[n]: + if 'attrspec' not in vars[n]: + vars[n]['attrspec'] = [] + if ('optional' not in vars[n]['attrspec']) and \ + ('required' not in vars[n]['attrspec']): + vars[n]['attrspec'].append('optional') + if 'depend' not in vars[n]: + vars[n]['depend'] = [] + for v, m in list(dep_matches.items()): + if m(vars[n]['=']): + vars[n]['depend'].append(v) + if not vars[n]['depend']: + del vars[n]['depend'] + if isscalar(vars[n]): + vars[n]['='] = _eval_scalar(vars[n]['='], params) + + for n in list(vars.keys()): + if n == block['name']: # n is block name + if 'note' in vars[n]: + block['note'] = vars[n]['note'] + if block['block'] == 'function': + if 'result' in block and block['result'] in vars: + vars[n] = appenddecl(vars[n], vars[block['result']]) + if 'prefix' in block: + pr = block['prefix'] + pr1 = pr.replace('pure', '') + ispure = (not pr == pr1) + pr = pr1.replace('recursive', '') + isrec = (not pr == pr1) + m = typespattern[0].match(pr) + if m: + typespec, selector, attr, edecl = cracktypespec0( + m.group('this'), m.group('after')) + kindselect, charselect, typename = cracktypespec( + typespec, selector) + vars[n]['typespec'] = typespec + try: + if block['result']: + vars[block['result']]['typespec'] = typespec + except Exception: + pass + if kindselect: + if 'kind' in kindselect: + try: + kindselect['kind'] = eval( + kindselect['kind'], {}, params) + except Exception: + pass + vars[n]['kindselector'] = kindselect + if charselect: + vars[n]['charselector'] = charselect + if typename: + vars[n]['typename'] = typename + if ispure: + vars[n] = setattrspec(vars[n], 'pure') + if isrec: + vars[n] = setattrspec(vars[n], 'recursive') + else: + outmess( + 'analyzevars: prefix (%s) were not used\n' % repr(block['prefix'])) + if not block['block'] in ['module', 'pythonmodule', 'python module', 'block data']: + if 'commonvars' in block: + neededvars = copy.copy(block['args'] + block['commonvars']) + else: + neededvars = copy.copy(block['args']) + for n in list(vars.keys()): + if l_or(isintent_callback, isintent_aux)(vars[n]): + neededvars.append(n) + if 'entry' in block: + neededvars.extend(list(block['entry'].keys())) + for k in list(block['entry'].keys()): + for n in block['entry'][k]: + if n not in neededvars: + neededvars.append(n) + if block['block'] == 'function': + if 'result' in block: + neededvars.append(block['result']) + else: + neededvars.append(block['name']) + if block['block'] in ['subroutine', 'function']: + name = block['name'] + if name in vars and 'intent' in vars[name]: + block['intent'] = vars[name]['intent'] + if block['block'] == 'type': + neededvars.extend(list(vars.keys())) + for n in list(vars.keys()): + if n not in neededvars: + del vars[n] + return vars + + +analyzeargs_re_1 = re.compile(r'\A[a-z]+[\w$]*\Z', re.I) + + +def param_eval(v, g_params, params, dimspec=None): + """ + Creates a dictionary of indices and values for each parameter in a + parameter array to be evaluated later. + + WARNING: It is not possible to initialize multidimensional array + parameters e.g. dimension(-3:1, 4, 3:5) at this point. This is because in + Fortran initialization through array constructor requires the RESHAPE + intrinsic function. Since the right-hand side of the parameter declaration + is not executed in f2py, but rather at the compiled c/fortran extension, + later, it is not possible to execute a reshape of a parameter array. + One issue remains: if the user wants to access the array parameter from + python, we should either + 1) allow them to access the parameter array using python standard indexing + (which is often incompatible with the original fortran indexing) + 2) allow the parameter array to be accessed in python as a dictionary with + fortran indices as keys + We are choosing 2 for now. + """ + if dimspec is None: + try: + p = eval(v, g_params, params) + except Exception as msg: + p = v + outmess(f'param_eval: got "{msg}" on {v!r}\n') + return p + + # This is an array parameter. + # First, we parse the dimension information + if len(dimspec) < 2 or dimspec[::len(dimspec)-1] != "()": + raise ValueError(f'param_eval: dimension {dimspec} can\'t be parsed') + dimrange = dimspec[1:-1].split(',') + if len(dimrange) == 1: + # e.g. dimension(2) or dimension(-1:1) + dimrange = dimrange[0].split(':') + # now, dimrange is a list of 1 or 2 elements + if len(dimrange) == 1: + bound = param_parse(dimrange[0], params) + dimrange = range(1, int(bound)+1) + else: + lbound = param_parse(dimrange[0], params) + ubound = param_parse(dimrange[1], params) + dimrange = range(int(lbound), int(ubound)+1) + else: + raise ValueError(f'param_eval: multidimensional array parameters ' + '{dimspec} not supported') + + # Parse parameter value + v = (v[2:-2] if v.startswith('(/') else v).split(',') + v_eval = [] + for item in v: + try: + item = eval(item, g_params, params) + except Exception as msg: + outmess(f'param_eval: got "{msg}" on {item!r}\n') + v_eval.append(item) + + p = dict(zip(dimrange, v_eval)) + + return p + + +def param_parse(d, params): + """Recursively parse array dimensions. + + Parses the declaration of an array variable or parameter + `dimension` keyword, and is called recursively if the + dimension for this array is a previously defined parameter + (found in `params`). + + Parameters + ---------- + d : str + Fortran expression describing the dimension of an array. + params : dict + Previously parsed parameters declared in the Fortran source file. + + Returns + ------- + out : str + Parsed dimension expression. + + Examples + -------- + + * If the line being analyzed is + + `integer, parameter, dimension(2) :: pa = (/ 3, 5 /)` + + then `d = 2` and we return immediately, with + + >>> d = '2' + >>> param_parse(d, params) + 2 + + * If the line being analyzed is + + `integer, parameter, dimension(pa) :: pb = (/1, 2, 3/)` + + then `d = 'pa'`; since `pa` is a previously parsed parameter, + and `pa = 3`, we call `param_parse` recursively, to obtain + + >>> d = 'pa' + >>> params = {'pa': 3} + >>> param_parse(d, params) + 3 + + * If the line being analyzed is + + `integer, parameter, dimension(pa(1)) :: pb = (/1, 2, 3/)` + + then `d = 'pa(1)'`; since `pa` is a previously parsed parameter, + and `pa(1) = 3`, we call `param_parse` recursively, to obtain + + >>> d = 'pa(1)' + >>> params = dict(pa={1: 3, 2: 5}) + >>> param_parse(d, params) + 3 + """ + if "(" in d: + # this dimension expression is an array + dname = d[:d.find("(")] + ddims = d[d.find("(")+1:d.rfind(")")] + # this dimension expression is also a parameter; + # parse it recursively + index = int(param_parse(ddims, params)) + return str(params[dname][index]) + elif d in params: + return str(params[d]) + else: + for p in params: + re_1 = re.compile( + r'(?P.*?)\b' + p + r'\b(?P.*)', re.I + ) + m = re_1.match(d) + while m: + d = m.group('before') + \ + str(params[p]) + m.group('after') + m = re_1.match(d) + return d + + +def expr2name(a, block, args=[]): + orig_a = a + a_is_expr = not analyzeargs_re_1.match(a) + if a_is_expr: # `a` is an expression + implicitrules, attrrules = buildimplicitrules(block) + at = determineexprtype(a, block['vars'], implicitrules) + na = 'e_' + for c in a: + c = c.lower() + if c not in string.ascii_lowercase + string.digits: + c = '_' + na = na + c + if na[-1] == '_': + na = na + 'e' + else: + na = na + '_e' + a = na + while a in block['vars'] or a in block['args']: + a = a + 'r' + if a in args: + k = 1 + while a + str(k) in args: + k = k + 1 + a = a + str(k) + if a_is_expr: + block['vars'][a] = at + else: + if a not in block['vars']: + if orig_a in block['vars']: + block['vars'][a] = block['vars'][orig_a] + else: + block['vars'][a] = {} + if 'externals' in block and orig_a in block['externals'] + block['interfaced']: + block['vars'][a] = setattrspec(block['vars'][a], 'external') + return a + + +def analyzeargs(block): + setmesstext(block) + implicitrules, _ = buildimplicitrules(block) + if 'args' not in block: + block['args'] = [] + args = [] + for a in block['args']: + a = expr2name(a, block, args) + args.append(a) + block['args'] = args + if 'entry' in block: + for k, args1 in list(block['entry'].items()): + for a in args1: + if a not in block['vars']: + block['vars'][a] = {} + + for b in block['body']: + if b['name'] in args: + if 'externals' not in block: + block['externals'] = [] + if b['name'] not in block['externals']: + block['externals'].append(b['name']) + if 'result' in block and block['result'] not in block['vars']: + block['vars'][block['result']] = {} + return block + +determineexprtype_re_1 = re.compile(r'\A\(.+?,.+?\)\Z', re.I) +determineexprtype_re_2 = re.compile(r'\A[+-]?\d+(_(?P\w+)|)\Z', re.I) +determineexprtype_re_3 = re.compile( + r'\A[+-]?[\d.]+[-\d+de.]*(_(?P\w+)|)\Z', re.I) +determineexprtype_re_4 = re.compile(r'\A\(.*\)\Z', re.I) +determineexprtype_re_5 = re.compile(r'\A(?P\w+)\s*\(.*?\)\s*\Z', re.I) + + +def _ensure_exprdict(r): + if isinstance(r, int): + return {'typespec': 'integer'} + if isinstance(r, float): + return {'typespec': 'real'} + if isinstance(r, complex): + return {'typespec': 'complex'} + if isinstance(r, dict): + return r + raise AssertionError(repr(r)) + + +def determineexprtype(expr, vars, rules={}): + if expr in vars: + return _ensure_exprdict(vars[expr]) + expr = expr.strip() + if determineexprtype_re_1.match(expr): + return {'typespec': 'complex'} + m = determineexprtype_re_2.match(expr) + if m: + if 'name' in m.groupdict() and m.group('name'): + outmess( + 'determineexprtype: selected kind types not supported (%s)\n' % repr(expr)) + return {'typespec': 'integer'} + m = determineexprtype_re_3.match(expr) + if m: + if 'name' in m.groupdict() and m.group('name'): + outmess( + 'determineexprtype: selected kind types not supported (%s)\n' % repr(expr)) + return {'typespec': 'real'} + for op in ['+', '-', '*', '/']: + for e in [x.strip() for x in markoutercomma(expr, comma=op).split('@' + op + '@')]: + if e in vars: + return _ensure_exprdict(vars[e]) + t = {} + if determineexprtype_re_4.match(expr): # in parenthesis + t = determineexprtype(expr[1:-1], vars, rules) + else: + m = determineexprtype_re_5.match(expr) + if m: + rn = m.group('name') + t = determineexprtype(m.group('name'), vars, rules) + if t and 'attrspec' in t: + del t['attrspec'] + if not t: + if rn[0] in rules: + return _ensure_exprdict(rules[rn[0]]) + if expr[0] in '\'"': + return {'typespec': 'character', 'charselector': {'*': '*'}} + if not t: + outmess( + 'determineexprtype: could not determine expressions (%s) type.\n' % (repr(expr))) + return t + +###### + + +def crack2fortrangen(block, tab='\n', as_interface=False): + global skipfuncs, onlyfuncs + + setmesstext(block) + ret = '' + if isinstance(block, list): + for g in block: + if g and g['block'] in ['function', 'subroutine']: + if g['name'] in skipfuncs: + continue + if onlyfuncs and g['name'] not in onlyfuncs: + continue + ret = ret + crack2fortrangen(g, tab, as_interface=as_interface) + return ret + prefix = '' + name = '' + args = '' + blocktype = block['block'] + if blocktype == 'program': + return '' + argsl = [] + if 'name' in block: + name = block['name'] + if 'args' in block: + vars = block['vars'] + for a in block['args']: + a = expr2name(a, block, argsl) + if not isintent_callback(vars[a]): + argsl.append(a) + if block['block'] == 'function' or argsl: + args = '(%s)' % ','.join(argsl) + f2pyenhancements = '' + if 'f2pyenhancements' in block: + for k in list(block['f2pyenhancements'].keys()): + f2pyenhancements = '%s%s%s %s' % ( + f2pyenhancements, tab + tabchar, k, block['f2pyenhancements'][k]) + intent_lst = block.get('intent', [])[:] + if blocktype == 'function' and 'callback' in intent_lst: + intent_lst.remove('callback') + if intent_lst: + f2pyenhancements = '%s%sintent(%s) %s' %\ + (f2pyenhancements, tab + tabchar, + ','.join(intent_lst), name) + use = '' + if 'use' in block: + use = use2fortran(block['use'], tab + tabchar) + common = '' + if 'common' in block: + common = common2fortran(block['common'], tab + tabchar) + if name == 'unknown_interface': + name = '' + result = '' + if 'result' in block: + result = ' result (%s)' % block['result'] + if block['result'] not in argsl: + argsl.append(block['result']) + body = crack2fortrangen(block['body'], tab + tabchar, as_interface=as_interface) + vars = vars2fortran( + block, block['vars'], argsl, tab + tabchar, as_interface=as_interface) + mess = '' + if 'from' in block and not as_interface: + mess = '! in %s' % block['from'] + if 'entry' in block: + entry_stmts = '' + for k, i in list(block['entry'].items()): + entry_stmts = '%s%sentry %s(%s)' \ + % (entry_stmts, tab + tabchar, k, ','.join(i)) + body = body + entry_stmts + if blocktype == 'block data' and name == '_BLOCK_DATA_': + name = '' + ret = '%s%s%s %s%s%s %s%s%s%s%s%s%send %s %s' % ( + tab, prefix, blocktype, name, args, result, mess, f2pyenhancements, use, vars, common, body, tab, blocktype, name) + return ret + + +def common2fortran(common, tab=''): + ret = '' + for k in list(common.keys()): + if k == '_BLNK_': + ret = '%s%scommon %s' % (ret, tab, ','.join(common[k])) + else: + ret = '%s%scommon /%s/ %s' % (ret, tab, k, ','.join(common[k])) + return ret + + +def use2fortran(use, tab=''): + ret = '' + for m in list(use.keys()): + ret = '%s%suse %s,' % (ret, tab, m) + if use[m] == {}: + if ret and ret[-1] == ',': + ret = ret[:-1] + continue + if 'only' in use[m] and use[m]['only']: + ret = '%s only:' % (ret) + if 'map' in use[m] and use[m]['map']: + c = ' ' + for k in list(use[m]['map'].keys()): + if k == use[m]['map'][k]: + ret = '%s%s%s' % (ret, c, k) + c = ',' + else: + ret = '%s%s%s=>%s' % (ret, c, k, use[m]['map'][k]) + c = ',' + if ret and ret[-1] == ',': + ret = ret[:-1] + return ret + + +def true_intent_list(var): + lst = var['intent'] + ret = [] + for intent in lst: + try: + f = globals()['isintent_%s' % intent] + except KeyError: + pass + else: + if f(var): + ret.append(intent) + return ret + + +def vars2fortran(block, vars, args, tab='', as_interface=False): + setmesstext(block) + ret = '' + nout = [] + for a in args: + if a in block['vars']: + nout.append(a) + if 'commonvars' in block: + for a in block['commonvars']: + if a in vars: + if a not in nout: + nout.append(a) + else: + errmess( + 'vars2fortran: Confused?!: "%s" is not defined in vars.\n' % a) + if 'varnames' in block: + nout.extend(block['varnames']) + if not as_interface: + for a in list(vars.keys()): + if a not in nout: + nout.append(a) + for a in nout: + if 'depend' in vars[a]: + for d in vars[a]['depend']: + if d in vars and 'depend' in vars[d] and a in vars[d]['depend']: + errmess( + 'vars2fortran: Warning: cross-dependence between variables "%s" and "%s"\n' % (a, d)) + if 'externals' in block and a in block['externals']: + if isintent_callback(vars[a]): + ret = '%s%sintent(callback) %s' % (ret, tab, a) + ret = '%s%sexternal %s' % (ret, tab, a) + if isoptional(vars[a]): + ret = '%s%soptional %s' % (ret, tab, a) + if a in vars and 'typespec' not in vars[a]: + continue + cont = 1 + for b in block['body']: + if a == b['name'] and b['block'] == 'function': + cont = 0 + break + if cont: + continue + if a not in vars: + show(vars) + outmess('vars2fortran: No definition for argument "%s".\n' % a) + continue + if a == block['name']: + if block['block'] != 'function' or block.get('result'): + # 1) skip declaring a variable that name matches with + # subroutine name + # 2) skip declaring function when its type is + # declared via `result` construction + continue + if 'typespec' not in vars[a]: + if 'attrspec' in vars[a] and 'external' in vars[a]['attrspec']: + if a in args: + ret = '%s%sexternal %s' % (ret, tab, a) + continue + show(vars[a]) + outmess('vars2fortran: No typespec for argument "%s".\n' % a) + continue + vardef = vars[a]['typespec'] + if vardef == 'type' and 'typename' in vars[a]: + vardef = '%s(%s)' % (vardef, vars[a]['typename']) + selector = {} + if 'kindselector' in vars[a]: + selector = vars[a]['kindselector'] + elif 'charselector' in vars[a]: + selector = vars[a]['charselector'] + if '*' in selector: + if selector['*'] in ['*', ':']: + vardef = '%s*(%s)' % (vardef, selector['*']) + else: + vardef = '%s*%s' % (vardef, selector['*']) + else: + if 'len' in selector: + vardef = '%s(len=%s' % (vardef, selector['len']) + if 'kind' in selector: + vardef = '%s,kind=%s)' % (vardef, selector['kind']) + else: + vardef = '%s)' % (vardef) + elif 'kind' in selector: + vardef = '%s(kind=%s)' % (vardef, selector['kind']) + c = ' ' + if 'attrspec' in vars[a]: + attr = [l for l in vars[a]['attrspec'] + if l not in ['external']] + if as_interface and 'intent(in)' in attr and 'intent(out)' in attr: + # In Fortran, intent(in, out) are conflicting while + # intent(in, out) can be specified only via + # `!f2py intent(out) ..`. + # So, for the Fortran interface, we'll drop + # intent(out) to resolve the conflict. + attr.remove('intent(out)') + if attr: + vardef = '%s, %s' % (vardef, ','.join(attr)) + c = ',' + if 'dimension' in vars[a]: + vardef = '%s%sdimension(%s)' % ( + vardef, c, ','.join(vars[a]['dimension'])) + c = ',' + if 'intent' in vars[a]: + lst = true_intent_list(vars[a]) + if lst: + vardef = '%s%sintent(%s)' % (vardef, c, ','.join(lst)) + c = ',' + if 'check' in vars[a]: + vardef = '%s%scheck(%s)' % (vardef, c, ','.join(vars[a]['check'])) + c = ',' + if 'depend' in vars[a]: + vardef = '%s%sdepend(%s)' % ( + vardef, c, ','.join(vars[a]['depend'])) + c = ',' + if '=' in vars[a]: + v = vars[a]['='] + if vars[a]['typespec'] in ['complex', 'double complex']: + try: + v = eval(v) + v = '(%s,%s)' % (v.real, v.imag) + except Exception: + pass + vardef = '%s :: %s=%s' % (vardef, a, v) + else: + vardef = '%s :: %s' % (vardef, a) + ret = '%s%s%s' % (ret, tab, vardef) + return ret +###### + + +# We expose post_processing_hooks as global variable so that +# user-libraries could register their own hooks to f2py. +post_processing_hooks = [] + + +def crackfortran(files): + global usermodules, post_processing_hooks + + outmess('Reading fortran codes...\n', 0) + readfortrancode(files, crackline) + outmess('Post-processing...\n', 0) + usermodules = [] + postlist = postcrack(grouplist[0]) + outmess('Applying post-processing hooks...\n', 0) + for hook in post_processing_hooks: + outmess(f' {hook.__name__}\n', 0) + postlist = traverse(postlist, hook) + outmess('Post-processing (stage 2)...\n', 0) + postlist = postcrack2(postlist) + return usermodules + postlist + + +def crack2fortran(block): + global f2py_version + + pyf = crack2fortrangen(block) + '\n' + header = """! -*- f90 -*- +! Note: the context of this file is case sensitive. +""" + footer = """ +! This file was auto-generated with f2py (version:%s). +! See: +! https://web.archive.org/web/20140822061353/http://cens.ioc.ee/projects/f2py2e +""" % (f2py_version) + return header + pyf + footer + + +def _is_visit_pair(obj): + return (isinstance(obj, tuple) + and len(obj) == 2 + and isinstance(obj[0], (int, str))) + + +def traverse(obj, visit, parents=[], result=None, *args, **kwargs): + '''Traverse f2py data structure with the following visit function: + + def visit(item, parents, result, *args, **kwargs): + """ + + parents is a list of key-"f2py data structure" pairs from which + items are taken from. + + result is a f2py data structure that is filled with the + return value of the visit function. + + item is 2-tuple (index, value) if parents[-1][1] is a list + item is 2-tuple (key, value) if parents[-1][1] is a dict + + The return value of visit must be None, or of the same kind as + item, that is, if parents[-1] is a list, the return value must + be 2-tuple (new_index, new_value), or if parents[-1] is a + dict, the return value must be 2-tuple (new_key, new_value). + + If new_index or new_value is None, the return value of visit + is ignored, that is, it will not be added to the result. + + If the return value is None, the content of obj will be + traversed, otherwise not. + """ + ''' + + if _is_visit_pair(obj): + if obj[0] == 'parent_block': + # avoid infinite recursion + return obj + new_result = visit(obj, parents, result, *args, **kwargs) + if new_result is not None: + assert _is_visit_pair(new_result) + return new_result + parent = obj + result_key, obj = obj + else: + parent = (None, obj) + result_key = None + + if isinstance(obj, list): + new_result = [] + for index, value in enumerate(obj): + new_index, new_item = traverse((index, value), visit, + parents=parents + [parent], + result=result, *args, **kwargs) + if new_index is not None: + new_result.append(new_item) + elif isinstance(obj, dict): + new_result = dict() + for key, value in obj.items(): + new_key, new_value = traverse((key, value), visit, + parents=parents + [parent], + result=result, *args, **kwargs) + if new_key is not None: + new_result[new_key] = new_value + else: + new_result = obj + + if result_key is None: + return new_result + return result_key, new_result + + +def character_backward_compatibility_hook(item, parents, result, + *args, **kwargs): + """Previously, Fortran character was incorrectly treated as + character*1. This hook fixes the usage of the corresponding + variables in `check`, `dimension`, `=`, and `callstatement` + expressions. + + The usage of `char*` in `callprotoargument` expression can be left + unchanged because C `character` is C typedef of `char`, although, + new implementations should use `character*` in the corresponding + expressions. + + See https://github.com/numpy/numpy/pull/19388 for more information. + + """ + parent_key, parent_value = parents[-1] + key, value = item + + def fix_usage(varname, value): + value = re.sub(r'[*]\s*\b' + varname + r'\b', varname, value) + value = re.sub(r'\b' + varname + r'\b\s*[\[]\s*0\s*[\]]', + varname, value) + return value + + if parent_key in ['dimension', 'check']: + assert parents[-3][0] == 'vars' + vars_dict = parents[-3][1] + elif key == '=': + assert parents[-2][0] == 'vars' + vars_dict = parents[-2][1] + else: + vars_dict = None + + new_value = None + if vars_dict is not None: + new_value = value + for varname, vd in vars_dict.items(): + if ischaracter(vd): + new_value = fix_usage(varname, new_value) + elif key == 'callstatement': + vars_dict = parents[-2][1]['vars'] + new_value = value + for varname, vd in vars_dict.items(): + if ischaracter(vd): + # replace all occurrences of `` with + # `&` in argument passing + new_value = re.sub( + r'(? `{new_value}`\n', 1) + return (key, new_value) + + +post_processing_hooks.append(character_backward_compatibility_hook) + + +if __name__ == "__main__": + files = [] + funcs = [] + f = 1 + f2 = 0 + f3 = 0 + showblocklist = 0 + for l in sys.argv[1:]: + if l == '': + pass + elif l[0] == ':': + f = 0 + elif l == '-quiet': + quiet = 1 + verbose = 0 + elif l == '-verbose': + verbose = 2 + quiet = 0 + elif l == '-fix': + if strictf77: + outmess( + 'Use option -f90 before -fix if Fortran 90 code is in fix form.\n', 0) + skipemptyends = 1 + sourcecodeform = 'fix' + elif l == '-skipemptyends': + skipemptyends = 1 + elif l == '--ignore-contains': + ignorecontains = 1 + elif l == '-f77': + strictf77 = 1 + sourcecodeform = 'fix' + elif l == '-f90': + strictf77 = 0 + sourcecodeform = 'free' + skipemptyends = 1 + elif l == '-h': + f2 = 1 + elif l == '-show': + showblocklist = 1 + elif l == '-m': + f3 = 1 + elif l[0] == '-': + errmess('Unknown option %s\n' % repr(l)) + elif f2: + f2 = 0 + pyffilename = l + elif f3: + f3 = 0 + f77modulename = l + elif f: + try: + open(l).close() + files.append(l) + except OSError as detail: + errmess(f'OSError: {detail!s}\n') + else: + funcs.append(l) + if not strictf77 and f77modulename and not skipemptyends: + outmess("""\ + Warning: You have specified module name for non Fortran 77 code that + should not need one (expect if you are scanning F90 code for non + module blocks but then you should use flag -skipemptyends and also + be sure that the files do not contain programs without program + statement). +""", 0) + + postlist = crackfortran(files) + if pyffilename: + outmess('Writing fortran code to file %s\n' % repr(pyffilename), 0) + pyf = crack2fortran(postlist) + with open(pyffilename, 'w') as f: + f.write(pyf) + if showblocklist: + show(postlist) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/diagnose.py b/venv/lib/python3.12/site-packages/numpy/f2py/diagnose.py new file mode 100644 index 0000000000000000000000000000000000000000..86d7004abad4e9fecb4922454759c827b3543352 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/diagnose.py @@ -0,0 +1,154 @@ +#!/usr/bin/env python3 +import os +import sys +import tempfile + + +def run_command(cmd): + print('Running %r:' % (cmd)) + os.system(cmd) + print('------') + + +def run(): + _path = os.getcwd() + os.chdir(tempfile.gettempdir()) + print('------') + print('os.name=%r' % (os.name)) + print('------') + print('sys.platform=%r' % (sys.platform)) + print('------') + print('sys.version:') + print(sys.version) + print('------') + print('sys.prefix:') + print(sys.prefix) + print('------') + print('sys.path=%r' % (':'.join(sys.path))) + print('------') + + try: + import numpy + has_newnumpy = 1 + except ImportError as e: + print('Failed to import new numpy:', e) + has_newnumpy = 0 + + try: + from numpy.f2py import f2py2e + has_f2py2e = 1 + except ImportError as e: + print('Failed to import f2py2e:', e) + has_f2py2e = 0 + + try: + import numpy.distutils + has_numpy_distutils = 2 + except ImportError: + try: + import numpy_distutils + has_numpy_distutils = 1 + except ImportError as e: + print('Failed to import numpy_distutils:', e) + has_numpy_distutils = 0 + + if has_newnumpy: + try: + print('Found new numpy version %r in %s' % + (numpy.__version__, numpy.__file__)) + except Exception as msg: + print('error:', msg) + print('------') + + if has_f2py2e: + try: + print('Found f2py2e version %r in %s' % + (f2py2e.__version__.version, f2py2e.__file__)) + except Exception as msg: + print('error:', msg) + print('------') + + if has_numpy_distutils: + try: + if has_numpy_distutils == 2: + print('Found numpy.distutils version %r in %r' % ( + numpy.distutils.__version__, + numpy.distutils.__file__)) + else: + print('Found numpy_distutils version %r in %r' % ( + numpy_distutils.numpy_distutils_version.numpy_distutils_version, + numpy_distutils.__file__)) + print('------') + except Exception as msg: + print('error:', msg) + print('------') + try: + if has_numpy_distutils == 1: + print( + 'Importing numpy_distutils.command.build_flib ...', end=' ') + import numpy_distutils.command.build_flib as build_flib + print('ok') + print('------') + try: + print( + 'Checking availability of supported Fortran compilers:') + for compiler_class in build_flib.all_compilers: + compiler_class(verbose=1).is_available() + print('------') + except Exception as msg: + print('error:', msg) + print('------') + except Exception as msg: + print( + 'error:', msg, '(ignore it, build_flib is obsolute for numpy.distutils 0.2.2 and up)') + print('------') + try: + if has_numpy_distutils == 2: + print('Importing numpy.distutils.fcompiler ...', end=' ') + import numpy.distutils.fcompiler as fcompiler + else: + print('Importing numpy_distutils.fcompiler ...', end=' ') + import numpy_distutils.fcompiler as fcompiler + print('ok') + print('------') + try: + print('Checking availability of supported Fortran compilers:') + fcompiler.show_fcompilers() + print('------') + except Exception as msg: + print('error:', msg) + print('------') + except Exception as msg: + print('error:', msg) + print('------') + try: + if has_numpy_distutils == 2: + print('Importing numpy.distutils.cpuinfo ...', end=' ') + from numpy.distutils.cpuinfo import cpuinfo + print('ok') + print('------') + else: + try: + print( + 'Importing numpy_distutils.command.cpuinfo ...', end=' ') + from numpy_distutils.command.cpuinfo import cpuinfo + print('ok') + print('------') + except Exception as msg: + print('error:', msg, '(ignore it)') + print('Importing numpy_distutils.cpuinfo ...', end=' ') + from numpy_distutils.cpuinfo import cpuinfo + print('ok') + print('------') + cpu = cpuinfo() + print('CPU information:', end=' ') + for name in dir(cpuinfo): + if name[0] == '_' and name[1] != '_' and getattr(cpu, name[1:])(): + print(name[1:], end=' ') + print('------') + except Exception as msg: + print('error:', msg) + print('------') + os.chdir(_path) +if __name__ == "__main__": + run() diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/f2py2e.py b/venv/lib/python3.12/site-packages/numpy/f2py/f2py2e.py new file mode 100644 index 0000000000000000000000000000000000000000..32cfbd0a3bea3723ad3b93cd26e36b446185f207 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/f2py2e.py @@ -0,0 +1,772 @@ +#!/usr/bin/env python3 +""" + +f2py2e - Fortran to Python C/API generator. 2nd Edition. + See __usage__ below. + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +import sys +import os +import pprint +import re +from pathlib import Path +from itertools import dropwhile +import argparse +import copy + +from . import crackfortran +from . import rules +from . import cb_rules +from . import auxfuncs +from . import cfuncs +from . import f90mod_rules +from . import __version__ +from . import capi_maps +from .cfuncs import errmess +from numpy.f2py._backends import f2py_build_generator + +f2py_version = __version__.version +numpy_version = __version__.version + +# outmess=sys.stdout.write +show = pprint.pprint +outmess = auxfuncs.outmess +MESON_ONLY_VER = (sys.version_info >= (3, 12)) + +__usage__ =\ +f"""Usage: + +1) To construct extension module sources: + + f2py [] [[[only:]||[skip:]] \\ + ] \\ + [: ...] + +2) To compile fortran files and build extension modules: + + f2py -c [, , ] + +3) To generate signature files: + + f2py -h ...< same options as in (1) > + +Description: This program generates a Python C/API file (module.c) + that contains wrappers for given fortran functions so that they + can be called from Python. With the -c option the corresponding + extension modules are built. + +Options: + + -h Write signatures of the fortran routines to file + and exit. You can then edit and use it instead + of . If ==stdout then the + signatures are printed to stdout. + Names of fortran routines for which Python C/API + functions will be generated. Default is all that are found + in . + Paths to fortran/signature files that will be scanned for + in order to determine their signatures. + skip: Ignore fortran functions that follow until `:'. + only: Use only fortran functions that follow until `:'. + : Get back to mode. + + -m Name of the module; f2py generates a Python/C API + file module.c or extension module . + Default is 'untitled'. + + '-include

' Writes additional headers in the C wrapper, can be passed + multiple times, generates #include
each time. + + --[no-]lower Do [not] lower the cases in . By default, + --lower is assumed with -h key, and --no-lower without -h key. + + --build-dir All f2py generated files are created in . + Default is tempfile.mkdtemp(). + + --overwrite-signature Overwrite existing signature file. + + --[no-]latex-doc Create (or not) module.tex. + Default is --no-latex-doc. + --short-latex Create 'incomplete' LaTeX document (without commands + \\documentclass, \\tableofcontents, and \\begin{{document}}, + \\end{{document}}). + + --[no-]rest-doc Create (or not) module.rst. + Default is --no-rest-doc. + + --debug-capi Create C/API code that reports the state of the wrappers + during runtime. Useful for debugging. + + --[no-]wrap-functions Create Fortran subroutine wrappers to Fortran 77 + functions. --wrap-functions is default because it ensures + maximum portability/compiler independence. + + --include-paths ::... Search include files from the given + directories. + + --help-link [..] List system resources found by system_info.py. See also + --link- switch below. [..] is optional list + of resources names. E.g. try 'f2py --help-link lapack_opt'. + + --f2cmap Load Fortran-to-Python KIND specification from the given + file. Default: .f2py_f2cmap in current directory. + + --quiet Run quietly. + --verbose Run with extra verbosity. + --skip-empty-wrappers Only generate wrapper files when needed. + -v Print f2py version ID and exit. + + +build backend options (only effective with -c) +[NO_MESON] is used to indicate an option not meant to be used +with the meson backend or above Python 3.12: + + --fcompiler= Specify Fortran compiler type by vendor [NO_MESON] + --compiler= Specify distutils C compiler type [NO_MESON] + + --help-fcompiler List available Fortran compilers and exit [NO_MESON] + --f77exec= Specify the path to F77 compiler [NO_MESON] + --f90exec= Specify the path to F90 compiler [NO_MESON] + --f77flags= Specify F77 compiler flags + --f90flags= Specify F90 compiler flags + --opt= Specify optimization flags [NO_MESON] + --arch= Specify architecture specific optimization flags [NO_MESON] + --noopt Compile without optimization [NO_MESON] + --noarch Compile without arch-dependent optimization [NO_MESON] + --debug Compile with debugging information + + --dep + Specify a meson dependency for the module. This may + be passed multiple times for multiple dependencies. + Dependencies are stored in a list for further processing. + + Example: --dep lapack --dep scalapack + This will identify "lapack" and "scalapack" as dependencies + and remove them from argv, leaving a dependencies list + containing ["lapack", "scalapack"]. + + --backend + Specify the build backend for the compilation process. + The supported backends are 'meson' and 'distutils'. + If not specified, defaults to 'distutils'. On + Python 3.12 or higher, the default is 'meson'. + +Extra options (only effective with -c): + + --link- Link extension module with as defined + by numpy.distutils/system_info.py. E.g. to link + with optimized LAPACK libraries (vecLib on MacOSX, + ATLAS elsewhere), use --link-lapack_opt. + See also --help-link switch. [NO_MESON] + + -L/path/to/lib/ -l + -D -U + -I/path/to/include/ + .o .so .a + + Using the following macros may be required with non-gcc Fortran + compilers: + -DPREPEND_FORTRAN -DNO_APPEND_FORTRAN -DUPPERCASE_FORTRAN + + When using -DF2PY_REPORT_ATEXIT, a performance report of F2PY + interface is printed out at exit (platforms: Linux). + + When using -DF2PY_REPORT_ON_ARRAY_COPY=, a message is + sent to stderr whenever F2PY interface makes a copy of an + array. Integer sets the threshold for array sizes when + a message should be shown. + +Version: {f2py_version} +numpy Version: {numpy_version} +License: NumPy license (see LICENSE.txt in the NumPy source code) +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +https://numpy.org/doc/stable/f2py/index.html\n""" + + +def scaninputline(inputline): + files, skipfuncs, onlyfuncs, debug = [], [], [], [] + f, f2, f3, f5, f6, f8, f9, f10 = 1, 0, 0, 0, 0, 0, 0, 0 + verbose = 1 + emptygen = True + dolc = -1 + dolatexdoc = 0 + dorestdoc = 0 + wrapfuncs = 1 + buildpath = '.' + include_paths, inputline = get_includes(inputline) + signsfile, modulename = None, None + options = {'buildpath': buildpath, + 'coutput': None, + 'f2py_wrapper_output': None} + for l in inputline: + if l == '': + pass + elif l == 'only:': + f = 0 + elif l == 'skip:': + f = -1 + elif l == ':': + f = 1 + elif l[:8] == '--debug-': + debug.append(l[8:]) + elif l == '--lower': + dolc = 1 + elif l == '--build-dir': + f6 = 1 + elif l == '--no-lower': + dolc = 0 + elif l == '--quiet': + verbose = 0 + elif l == '--verbose': + verbose += 1 + elif l == '--latex-doc': + dolatexdoc = 1 + elif l == '--no-latex-doc': + dolatexdoc = 0 + elif l == '--rest-doc': + dorestdoc = 1 + elif l == '--no-rest-doc': + dorestdoc = 0 + elif l == '--wrap-functions': + wrapfuncs = 1 + elif l == '--no-wrap-functions': + wrapfuncs = 0 + elif l == '--short-latex': + options['shortlatex'] = 1 + elif l == '--coutput': + f8 = 1 + elif l == '--f2py-wrapper-output': + f9 = 1 + elif l == '--f2cmap': + f10 = 1 + elif l == '--overwrite-signature': + options['h-overwrite'] = 1 + elif l == '-h': + f2 = 1 + elif l == '-m': + f3 = 1 + elif l[:2] == '-v': + print(f2py_version) + sys.exit() + elif l == '--show-compilers': + f5 = 1 + elif l[:8] == '-include': + cfuncs.outneeds['userincludes'].append(l[9:-1]) + cfuncs.userincludes[l[9:-1]] = '#include ' + l[8:] + elif l == '--skip-empty-wrappers': + emptygen = False + elif l[0] == '-': + errmess('Unknown option %s\n' % repr(l)) + sys.exit() + elif f2: + f2 = 0 + signsfile = l + elif f3: + f3 = 0 + modulename = l + elif f6: + f6 = 0 + buildpath = l + elif f8: + f8 = 0 + options["coutput"] = l + elif f9: + f9 = 0 + options["f2py_wrapper_output"] = l + elif f10: + f10 = 0 + options["f2cmap_file"] = l + elif f == 1: + try: + with open(l): + pass + files.append(l) + except OSError as detail: + errmess(f'OSError: {detail!s}. Skipping file "{l!s}".\n') + elif f == -1: + skipfuncs.append(l) + elif f == 0: + onlyfuncs.append(l) + if not f5 and not files and not modulename: + print(__usage__) + sys.exit() + if not os.path.isdir(buildpath): + if not verbose: + outmess('Creating build directory %s\n' % (buildpath)) + os.mkdir(buildpath) + if signsfile: + signsfile = os.path.join(buildpath, signsfile) + if signsfile and os.path.isfile(signsfile) and 'h-overwrite' not in options: + errmess( + 'Signature file "%s" exists!!! Use --overwrite-signature to overwrite.\n' % (signsfile)) + sys.exit() + + options['emptygen'] = emptygen + options['debug'] = debug + options['verbose'] = verbose + if dolc == -1 and not signsfile: + options['do-lower'] = 0 + else: + options['do-lower'] = dolc + if modulename: + options['module'] = modulename + if signsfile: + options['signsfile'] = signsfile + if onlyfuncs: + options['onlyfuncs'] = onlyfuncs + if skipfuncs: + options['skipfuncs'] = skipfuncs + options['dolatexdoc'] = dolatexdoc + options['dorestdoc'] = dorestdoc + options['wrapfuncs'] = wrapfuncs + options['buildpath'] = buildpath + options['include_paths'] = include_paths + options.setdefault('f2cmap_file', None) + return files, options + + +def callcrackfortran(files, options): + rules.options = options + crackfortran.debug = options['debug'] + crackfortran.verbose = options['verbose'] + if 'module' in options: + crackfortran.f77modulename = options['module'] + if 'skipfuncs' in options: + crackfortran.skipfuncs = options['skipfuncs'] + if 'onlyfuncs' in options: + crackfortran.onlyfuncs = options['onlyfuncs'] + crackfortran.include_paths[:] = options['include_paths'] + crackfortran.dolowercase = options['do-lower'] + postlist = crackfortran.crackfortran(files) + if 'signsfile' in options: + outmess('Saving signatures to file "%s"\n' % (options['signsfile'])) + pyf = crackfortran.crack2fortran(postlist) + if options['signsfile'][-6:] == 'stdout': + sys.stdout.write(pyf) + else: + with open(options['signsfile'], 'w') as f: + f.write(pyf) + if options["coutput"] is None: + for mod in postlist: + mod["coutput"] = "%smodule.c" % mod["name"] + else: + for mod in postlist: + mod["coutput"] = options["coutput"] + if options["f2py_wrapper_output"] is None: + for mod in postlist: + mod["f2py_wrapper_output"] = "%s-f2pywrappers.f" % mod["name"] + else: + for mod in postlist: + mod["f2py_wrapper_output"] = options["f2py_wrapper_output"] + return postlist + + +def buildmodules(lst): + cfuncs.buildcfuncs() + outmess('Building modules...\n') + modules, mnames, isusedby = [], [], {} + for item in lst: + if '__user__' in item['name']: + cb_rules.buildcallbacks(item) + else: + if 'use' in item: + for u in item['use'].keys(): + if u not in isusedby: + isusedby[u] = [] + isusedby[u].append(item['name']) + modules.append(item) + mnames.append(item['name']) + ret = {} + for module, name in zip(modules, mnames): + if name in isusedby: + outmess('\tSkipping module "%s" which is used by %s.\n' % ( + name, ','.join('"%s"' % s for s in isusedby[name]))) + else: + um = [] + if 'use' in module: + for u in module['use'].keys(): + if u in isusedby and u in mnames: + um.append(modules[mnames.index(u)]) + else: + outmess( + f'\tModule "{name}" uses nonexisting "{u}" ' + 'which will be ignored.\n') + ret[name] = {} + dict_append(ret[name], rules.buildmodule(module, um)) + return ret + + +def dict_append(d_out, d_in): + for (k, v) in d_in.items(): + if k not in d_out: + d_out[k] = [] + if isinstance(v, list): + d_out[k] = d_out[k] + v + else: + d_out[k].append(v) + + +def run_main(comline_list): + """ + Equivalent to running:: + + f2py + + where ``=string.join(,' ')``, but in Python. Unless + ``-h`` is used, this function returns a dictionary containing + information on generated modules and their dependencies on source + files. + + You cannot build extension modules with this function, that is, + using ``-c`` is not allowed. Use the ``compile`` command instead. + + Examples + -------- + The command ``f2py -m scalar scalar.f`` can be executed from Python as + follows. + + .. literalinclude:: ../../source/f2py/code/results/run_main_session.dat + :language: python + + """ + crackfortran.reset_global_f2py_vars() + f2pydir = os.path.dirname(os.path.abspath(cfuncs.__file__)) + fobjhsrc = os.path.join(f2pydir, 'src', 'fortranobject.h') + fobjcsrc = os.path.join(f2pydir, 'src', 'fortranobject.c') + # gh-22819 -- begin + parser = make_f2py_compile_parser() + args, comline_list = parser.parse_known_args(comline_list) + pyf_files, _ = filter_files("", "[.]pyf([.]src|)", comline_list) + # Checks that no existing modulename is defined in a pyf file + # TODO: Remove all this when scaninputline is replaced + if args.module_name: + if "-h" in comline_list: + modname = ( + args.module_name + ) # Directly use from args when -h is present + else: + modname = validate_modulename( + pyf_files, args.module_name + ) # Validate modname when -h is not present + comline_list += ['-m', modname] # needed for the rest of scaninputline + # gh-22819 -- end + files, options = scaninputline(comline_list) + auxfuncs.options = options + capi_maps.load_f2cmap_file(options['f2cmap_file']) + postlist = callcrackfortran(files, options) + isusedby = {} + for plist in postlist: + if 'use' in plist: + for u in plist['use'].keys(): + if u not in isusedby: + isusedby[u] = [] + isusedby[u].append(plist['name']) + for plist in postlist: + if plist['block'] == 'python module' and '__user__' in plist['name']: + if plist['name'] in isusedby: + # if not quiet: + outmess( + f'Skipping Makefile build for module "{plist["name"]}" ' + 'which is used by {}\n'.format( + ','.join(f'"{s}"' for s in isusedby[plist['name']]))) + if 'signsfile' in options: + if options['verbose'] > 1: + outmess( + 'Stopping. Edit the signature file and then run f2py on the signature file: ') + outmess('%s %s\n' % + (os.path.basename(sys.argv[0]), options['signsfile'])) + return + for plist in postlist: + if plist['block'] != 'python module': + if 'python module' not in options: + errmess( + 'Tip: If your original code is Fortran source then you must use -m option.\n') + raise TypeError('All blocks must be python module blocks but got %s' % ( + repr(plist['block']))) + auxfuncs.debugoptions = options['debug'] + f90mod_rules.options = options + auxfuncs.wrapfuncs = options['wrapfuncs'] + + ret = buildmodules(postlist) + + for mn in ret.keys(): + dict_append(ret[mn], {'csrc': fobjcsrc, 'h': fobjhsrc}) + return ret + + +def filter_files(prefix, suffix, files, remove_prefix=None): + """ + Filter files by prefix and suffix. + """ + filtered, rest = [], [] + match = re.compile(prefix + r'.*' + suffix + r'\Z').match + if remove_prefix: + ind = len(prefix) + else: + ind = 0 + for file in [x.strip() for x in files]: + if match(file): + filtered.append(file[ind:]) + else: + rest.append(file) + return filtered, rest + + +def get_prefix(module): + p = os.path.dirname(os.path.dirname(module.__file__)) + return p + + +class CombineIncludePaths(argparse.Action): + def __call__(self, parser, namespace, values, option_string=None): + include_paths_set = set(getattr(namespace, 'include_paths', []) or []) + if option_string == "--include_paths": + outmess("Use --include-paths or -I instead of --include_paths which will be removed") + if option_string == "--include-paths" or option_string == "--include_paths": + include_paths_set.update(values.split(':')) + else: + include_paths_set.add(values) + setattr(namespace, 'include_paths', list(include_paths_set)) + +def include_parser(): + parser = argparse.ArgumentParser(add_help=False) + parser.add_argument("-I", dest="include_paths", action=CombineIncludePaths) + parser.add_argument("--include-paths", dest="include_paths", action=CombineIncludePaths) + parser.add_argument("--include_paths", dest="include_paths", action=CombineIncludePaths) + return parser + +def get_includes(iline): + iline = (' '.join(iline)).split() + parser = include_parser() + args, remain = parser.parse_known_args(iline) + ipaths = args.include_paths + if args.include_paths is None: + ipaths = [] + return ipaths, remain + +def make_f2py_compile_parser(): + parser = argparse.ArgumentParser(add_help=False) + parser.add_argument("--dep", action="append", dest="dependencies") + parser.add_argument("--backend", choices=['meson', 'distutils'], default='distutils') + parser.add_argument("-m", dest="module_name") + return parser + +def preparse_sysargv(): + # To keep backwards bug compatibility, newer flags are handled by argparse, + # and `sys.argv` is passed to the rest of `f2py` as is. + parser = make_f2py_compile_parser() + + args, remaining_argv = parser.parse_known_args() + sys.argv = [sys.argv[0]] + remaining_argv + + backend_key = args.backend + if MESON_ONLY_VER and backend_key == 'distutils': + outmess("Cannot use distutils backend with Python>=3.12," + " using meson backend instead.\n") + backend_key = "meson" + + return { + "dependencies": args.dependencies or [], + "backend": backend_key, + "modulename": args.module_name, + } + +def run_compile(): + """ + Do it all in one call! + """ + import tempfile + + # Collect dependency flags, preprocess sys.argv + argy = preparse_sysargv() + modulename = argy["modulename"] + if modulename is None: + modulename = 'untitled' + dependencies = argy["dependencies"] + backend_key = argy["backend"] + build_backend = f2py_build_generator(backend_key) + + i = sys.argv.index('-c') + del sys.argv[i] + + remove_build_dir = 0 + try: + i = sys.argv.index('--build-dir') + except ValueError: + i = None + if i is not None: + build_dir = sys.argv[i + 1] + del sys.argv[i + 1] + del sys.argv[i] + else: + remove_build_dir = 1 + build_dir = tempfile.mkdtemp() + + _reg1 = re.compile(r'--link-') + sysinfo_flags = [_m for _m in sys.argv[1:] if _reg1.match(_m)] + sys.argv = [_m for _m in sys.argv if _m not in sysinfo_flags] + if sysinfo_flags: + sysinfo_flags = [f[7:] for f in sysinfo_flags] + + _reg2 = re.compile( + r'--((no-|)(wrap-functions|lower)|debug-capi|quiet|skip-empty-wrappers)|-include') + f2py_flags = [_m for _m in sys.argv[1:] if _reg2.match(_m)] + sys.argv = [_m for _m in sys.argv if _m not in f2py_flags] + f2py_flags2 = [] + fl = 0 + for a in sys.argv[1:]: + if a in ['only:', 'skip:']: + fl = 1 + elif a == ':': + fl = 0 + if fl or a == ':': + f2py_flags2.append(a) + if f2py_flags2 and f2py_flags2[-1] != ':': + f2py_flags2.append(':') + f2py_flags.extend(f2py_flags2) + sys.argv = [_m for _m in sys.argv if _m not in f2py_flags2] + _reg3 = re.compile( + r'--((f(90)?compiler(-exec|)|compiler)=|help-compiler)') + flib_flags = [_m for _m in sys.argv[1:] if _reg3.match(_m)] + sys.argv = [_m for _m in sys.argv if _m not in flib_flags] + # TODO: Once distutils is dropped completely, i.e. min_ver >= 3.12, unify into --fflags + reg_f77_f90_flags = re.compile(r'--f(77|90)flags=') + reg_distutils_flags = re.compile(r'--((f(77|90)exec|opt|arch)=|(debug|noopt|noarch|help-fcompiler))') + fc_flags = [_m for _m in sys.argv[1:] if reg_f77_f90_flags.match(_m)] + distutils_flags = [_m for _m in sys.argv[1:] if reg_distutils_flags.match(_m)] + if not (MESON_ONLY_VER or backend_key == 'meson'): + fc_flags.extend(distutils_flags) + sys.argv = [_m for _m in sys.argv if _m not in (fc_flags + distutils_flags)] + + del_list = [] + for s in flib_flags: + v = '--fcompiler=' + if s[:len(v)] == v: + if MESON_ONLY_VER or backend_key == 'meson': + outmess( + "--fcompiler cannot be used with meson," + "set compiler with the FC environment variable\n" + ) + else: + from numpy.distutils import fcompiler + fcompiler.load_all_fcompiler_classes() + allowed_keys = list(fcompiler.fcompiler_class.keys()) + nv = ov = s[len(v):].lower() + if ov not in allowed_keys: + vmap = {} # XXX + try: + nv = vmap[ov] + except KeyError: + if ov not in vmap.values(): + print('Unknown vendor: "%s"' % (s[len(v):])) + nv = ov + i = flib_flags.index(s) + flib_flags[i] = '--fcompiler=' + nv + continue + for s in del_list: + i = flib_flags.index(s) + del flib_flags[i] + assert len(flib_flags) <= 2, repr(flib_flags) + + _reg5 = re.compile(r'--(verbose)') + setup_flags = [_m for _m in sys.argv[1:] if _reg5.match(_m)] + sys.argv = [_m for _m in sys.argv if _m not in setup_flags] + + if '--quiet' in f2py_flags: + setup_flags.append('--quiet') + + # Ugly filter to remove everything but sources + sources = sys.argv[1:] + f2cmapopt = '--f2cmap' + if f2cmapopt in sys.argv: + i = sys.argv.index(f2cmapopt) + f2py_flags.extend(sys.argv[i:i + 2]) + del sys.argv[i + 1], sys.argv[i] + sources = sys.argv[1:] + + pyf_files, _sources = filter_files("", "[.]pyf([.]src|)", sources) + sources = pyf_files + _sources + modulename = validate_modulename(pyf_files, modulename) + extra_objects, sources = filter_files('', '[.](o|a|so|dylib)', sources) + library_dirs, sources = filter_files('-L', '', sources, remove_prefix=1) + libraries, sources = filter_files('-l', '', sources, remove_prefix=1) + undef_macros, sources = filter_files('-U', '', sources, remove_prefix=1) + define_macros, sources = filter_files('-D', '', sources, remove_prefix=1) + for i in range(len(define_macros)): + name_value = define_macros[i].split('=', 1) + if len(name_value) == 1: + name_value.append(None) + if len(name_value) == 2: + define_macros[i] = tuple(name_value) + else: + print('Invalid use of -D:', name_value) + + # Construct wrappers / signatures / things + if backend_key == 'meson': + if not pyf_files: + outmess('Using meson backend\nWill pass --lower to f2py\nSee https://numpy.org/doc/stable/f2py/buildtools/meson.html\n') + f2py_flags.append('--lower') + run_main(f" {' '.join(f2py_flags)} -m {modulename} {' '.join(sources)}".split()) + else: + run_main(f" {' '.join(f2py_flags)} {' '.join(pyf_files)}".split()) + + # Order matters here, includes are needed for run_main above + include_dirs, sources = get_includes(sources) + # Now use the builder + builder = build_backend( + modulename, + sources, + extra_objects, + build_dir, + include_dirs, + library_dirs, + libraries, + define_macros, + undef_macros, + f2py_flags, + sysinfo_flags, + fc_flags, + flib_flags, + setup_flags, + remove_build_dir, + {"dependencies": dependencies}, + ) + + builder.compile() + + +def validate_modulename(pyf_files, modulename='untitled'): + if len(pyf_files) > 1: + raise ValueError("Only one .pyf file per call") + if pyf_files: + pyff = pyf_files[0] + pyf_modname = auxfuncs.get_f2py_modulename(pyff) + if modulename != pyf_modname: + outmess( + f"Ignoring -m {modulename}.\n" + f"{pyff} defines {pyf_modname} to be the modulename.\n" + ) + modulename = pyf_modname + return modulename + +def main(): + if '--help-link' in sys.argv[1:]: + sys.argv.remove('--help-link') + if MESON_ONLY_VER: + outmess("Use --dep for meson builds\n") + else: + from numpy.distutils.system_info import show_all + show_all() + return + + if '-c' in sys.argv[1:]: + run_compile() + else: + run_main(sys.argv[1:]) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/f90mod_rules.py b/venv/lib/python3.12/site-packages/numpy/f2py/f90mod_rules.py new file mode 100644 index 0000000000000000000000000000000000000000..db53beaf616b018db04fb3848ddf3daa405be5a7 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/f90mod_rules.py @@ -0,0 +1,267 @@ +""" +Build F90 module support for f2py2e. + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +__version__ = "$Revision: 1.27 $"[10:-1] + +f2py_version = 'See `f2py -v`' + +import numpy as np + +from . import capi_maps +from . import func2subr +from .crackfortran import undo_rmbadname, undo_rmbadname1 + +# The environment provided by auxfuncs.py is needed for some calls to eval. +# As the needed functions cannot be determined by static inspection of the +# code, it is safest to use import * pending a major refactoring of f2py. +from .auxfuncs import * + +options = {} + + +def findf90modules(m): + if ismodule(m): + return [m] + if not hasbody(m): + return [] + ret = [] + for b in m['body']: + if ismodule(b): + ret.append(b) + else: + ret = ret + findf90modules(b) + return ret + +fgetdims1 = """\ + external f2pysetdata + logical ns + integer r,i + integer(%d) s(*) + ns = .FALSE. + if (allocated(d)) then + do i=1,r + if ((size(d,i).ne.s(i)).and.(s(i).ge.0)) then + ns = .TRUE. + end if + end do + if (ns) then + deallocate(d) + end if + end if + if ((.not.allocated(d)).and.(s(1).ge.1)) then""" % np.intp().itemsize + +fgetdims2 = """\ + end if + if (allocated(d)) then + do i=1,r + s(i) = size(d,i) + end do + end if + flag = 1 + call f2pysetdata(d,allocated(d))""" + +fgetdims2_sa = """\ + end if + if (allocated(d)) then + do i=1,r + s(i) = size(d,i) + end do + !s(r) must be equal to len(d(1)) + end if + flag = 2 + call f2pysetdata(d,allocated(d))""" + + +def buildhooks(pymod): + from . import rules + ret = {'f90modhooks': [], 'initf90modhooks': [], 'body': [], + 'need': ['F_FUNC', 'arrayobject.h'], + 'separatorsfor': {'includes0': '\n', 'includes': '\n'}, + 'docs': ['"Fortran 90/95 modules:\\n"'], + 'latexdoc': []} + fhooks = [''] + + def fadd(line, s=fhooks): + s[0] = '%s\n %s' % (s[0], line) + doc = [''] + + def dadd(line, s=doc): + s[0] = '%s\n%s' % (s[0], line) + + usenames = getuseblocks(pymod) + for m in findf90modules(pymod): + contains_functions_or_subroutines = any( + item for item in m["body"] if item["block"] in ["function", "subroutine"] + ) + sargs, fargs, efargs, modobjs, notvars, onlyvars = [], [], [], [], [ + m['name']], [] + sargsp = [] + ifargs = [] + mfargs = [] + if hasbody(m): + for b in m['body']: + notvars.append(b['name']) + for n in m['vars'].keys(): + var = m['vars'][n] + if (n not in notvars) and (not l_or(isintent_hide, isprivate)(var)): + onlyvars.append(n) + mfargs.append(n) + outmess('\t\tConstructing F90 module support for "%s"...\n' % + (m['name'])) + if m['name'] in usenames and not contains_functions_or_subroutines: + outmess(f"\t\t\tSkipping {m['name']} since it is in 'use'...\n") + continue + if onlyvars: + outmess('\t\t Variables: %s\n' % (' '.join(onlyvars))) + chooks = [''] + + def cadd(line, s=chooks): + s[0] = '%s\n%s' % (s[0], line) + ihooks = [''] + + def iadd(line, s=ihooks): + s[0] = '%s\n%s' % (s[0], line) + + vrd = capi_maps.modsign2map(m) + cadd('static FortranDataDef f2py_%s_def[] = {' % (m['name'])) + dadd('\\subsection{Fortran 90/95 module \\texttt{%s}}\n' % (m['name'])) + if hasnote(m): + note = m['note'] + if isinstance(note, list): + note = '\n'.join(note) + dadd(note) + if onlyvars: + dadd('\\begin{description}') + for n in onlyvars: + var = m['vars'][n] + modobjs.append(n) + ct = capi_maps.getctype(var) + at = capi_maps.c2capi_map[ct] + dm = capi_maps.getarrdims(n, var) + dms = dm['dims'].replace('*', '-1').strip() + dms = dms.replace(':', '-1').strip() + if not dms: + dms = '-1' + use_fgetdims2 = fgetdims2 + cadd('\t{"%s",%s,{{%s}},%s, %s},' % + (undo_rmbadname1(n), dm['rank'], dms, at, + capi_maps.get_elsize(var))) + dadd('\\item[]{{}\\verb@%s@{}}' % + (capi_maps.getarrdocsign(n, var))) + if hasnote(var): + note = var['note'] + if isinstance(note, list): + note = '\n'.join(note) + dadd('--- %s' % (note)) + if isallocatable(var): + fargs.append('f2py_%s_getdims_%s' % (m['name'], n)) + efargs.append(fargs[-1]) + sargs.append( + 'void (*%s)(int*,npy_intp*,void(*)(char*,npy_intp*),int*)' % (n)) + sargsp.append('void (*)(int*,npy_intp*,void(*)(char*,npy_intp*),int*)') + iadd('\tf2py_%s_def[i_f2py++].func = %s;' % (m['name'], n)) + fadd('subroutine %s(r,s,f2pysetdata,flag)' % (fargs[-1])) + fadd('use %s, only: d => %s\n' % + (m['name'], undo_rmbadname1(n))) + fadd('integer flag\n') + fhooks[0] = fhooks[0] + fgetdims1 + dms = range(1, int(dm['rank']) + 1) + fadd(' allocate(d(%s))\n' % + (','.join(['s(%s)' % i for i in dms]))) + fhooks[0] = fhooks[0] + use_fgetdims2 + fadd('end subroutine %s' % (fargs[-1])) + else: + fargs.append(n) + sargs.append('char *%s' % (n)) + sargsp.append('char*') + iadd('\tf2py_%s_def[i_f2py++].data = %s;' % (m['name'], n)) + if onlyvars: + dadd('\\end{description}') + if hasbody(m): + for b in m['body']: + if not isroutine(b): + outmess("f90mod_rules.buildhooks:" + f" skipping {b['block']} {b['name']}\n") + continue + modobjs.append('%s()' % (b['name'])) + b['modulename'] = m['name'] + api, wrap = rules.buildapi(b) + if isfunction(b): + fhooks[0] = fhooks[0] + wrap + fargs.append('f2pywrap_%s_%s' % (m['name'], b['name'])) + ifargs.append(func2subr.createfuncwrapper(b, signature=1)) + else: + if wrap: + fhooks[0] = fhooks[0] + wrap + fargs.append('f2pywrap_%s_%s' % (m['name'], b['name'])) + ifargs.append( + func2subr.createsubrwrapper(b, signature=1)) + else: + fargs.append(b['name']) + mfargs.append(fargs[-1]) + api['externroutines'] = [] + ar = applyrules(api, vrd) + ar['docs'] = [] + ar['docshort'] = [] + ret = dictappend(ret, ar) + cadd(('\t{"%s",-1,{{-1}},0,0,NULL,(void *)' + 'f2py_rout_#modulename#_%s_%s,' + 'doc_f2py_rout_#modulename#_%s_%s},') + % (b['name'], m['name'], b['name'], m['name'], b['name'])) + sargs.append('char *%s' % (b['name'])) + sargsp.append('char *') + iadd('\tf2py_%s_def[i_f2py++].data = %s;' % + (m['name'], b['name'])) + cadd('\t{NULL}\n};\n') + iadd('}') + ihooks[0] = 'static void f2py_setup_%s(%s) {\n\tint i_f2py=0;%s' % ( + m['name'], ','.join(sargs), ihooks[0]) + if '_' in m['name']: + F_FUNC = 'F_FUNC_US' + else: + F_FUNC = 'F_FUNC' + iadd('extern void %s(f2pyinit%s,F2PYINIT%s)(void (*)(%s));' + % (F_FUNC, m['name'], m['name'].upper(), ','.join(sargsp))) + iadd('static void f2py_init_%s(void) {' % (m['name'])) + iadd('\t%s(f2pyinit%s,F2PYINIT%s)(f2py_setup_%s);' + % (F_FUNC, m['name'], m['name'].upper(), m['name'])) + iadd('}\n') + ret['f90modhooks'] = ret['f90modhooks'] + chooks + ihooks + ret['initf90modhooks'] = ['\tPyDict_SetItemString(d, "%s", PyFortranObject_New(f2py_%s_def,f2py_init_%s));' % ( + m['name'], m['name'], m['name'])] + ret['initf90modhooks'] + fadd('') + fadd('subroutine f2pyinit%s(f2pysetupfunc)' % (m['name'])) + if mfargs: + for a in undo_rmbadname(mfargs): + fadd('use %s, only : %s' % (m['name'], a)) + if ifargs: + fadd(' '.join(['interface'] + ifargs)) + fadd('end interface') + fadd('external f2pysetupfunc') + if efargs: + for a in undo_rmbadname(efargs): + fadd('external %s' % (a)) + fadd('call f2pysetupfunc(%s)' % (','.join(undo_rmbadname(fargs)))) + fadd('end subroutine f2pyinit%s\n' % (m['name'])) + + dadd('\n'.join(ret['latexdoc']).replace( + r'\subsection{', r'\subsubsection{')) + + ret['latexdoc'] = [] + ret['docs'].append('"\t%s --- %s"' % (m['name'], + ','.join(undo_rmbadname(modobjs)))) + + ret['routine_defs'] = '' + ret['doc'] = [] + ret['docshort'] = [] + ret['latexdoc'] = doc[0] + if len(ret['docs']) <= 1: + ret['docs'] = '' + return ret, fhooks[0] diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/func2subr.py b/venv/lib/python3.12/site-packages/numpy/f2py/func2subr.py new file mode 100644 index 0000000000000000000000000000000000000000..b9aa9fc007cb8efdfdd13138671f0412d45d63a2 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/func2subr.py @@ -0,0 +1,323 @@ +""" + +Rules for building C/API module with f2py2e. + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +import copy + +from .auxfuncs import ( + getfortranname, isexternal, isfunction, isfunction_wrap, isintent_in, + isintent_out, islogicalfunction, ismoduleroutine, isscalar, + issubroutine, issubroutine_wrap, outmess, show +) + +from ._isocbind import isoc_kindmap + +def var2fixfortran(vars, a, fa=None, f90mode=None): + if fa is None: + fa = a + if a not in vars: + show(vars) + outmess('var2fixfortran: No definition for argument "%s".\n' % a) + return '' + if 'typespec' not in vars[a]: + show(vars[a]) + outmess('var2fixfortran: No typespec for argument "%s".\n' % a) + return '' + vardef = vars[a]['typespec'] + if vardef == 'type' and 'typename' in vars[a]: + vardef = '%s(%s)' % (vardef, vars[a]['typename']) + selector = {} + lk = '' + if 'kindselector' in vars[a]: + selector = vars[a]['kindselector'] + lk = 'kind' + elif 'charselector' in vars[a]: + selector = vars[a]['charselector'] + lk = 'len' + if '*' in selector: + if f90mode: + if selector['*'] in ['*', ':', '(*)']: + vardef = '%s(len=*)' % (vardef) + else: + vardef = '%s(%s=%s)' % (vardef, lk, selector['*']) + else: + if selector['*'] in ['*', ':']: + vardef = '%s*(%s)' % (vardef, selector['*']) + else: + vardef = '%s*%s' % (vardef, selector['*']) + else: + if 'len' in selector: + vardef = '%s(len=%s' % (vardef, selector['len']) + if 'kind' in selector: + vardef = '%s,kind=%s)' % (vardef, selector['kind']) + else: + vardef = '%s)' % (vardef) + elif 'kind' in selector: + vardef = '%s(kind=%s)' % (vardef, selector['kind']) + + vardef = '%s %s' % (vardef, fa) + if 'dimension' in vars[a]: + vardef = '%s(%s)' % (vardef, ','.join(vars[a]['dimension'])) + return vardef + +def useiso_c_binding(rout): + useisoc = False + for key, value in rout['vars'].items(): + kind_value = value.get('kindselector', {}).get('kind') + if kind_value in isoc_kindmap: + return True + return useisoc + +def createfuncwrapper(rout, signature=0): + assert isfunction(rout) + + extra_args = [] + vars = rout['vars'] + for a in rout['args']: + v = rout['vars'][a] + for i, d in enumerate(v.get('dimension', [])): + if d == ':': + dn = 'f2py_%s_d%s' % (a, i) + dv = dict(typespec='integer', intent=['hide']) + dv['='] = 'shape(%s, %s)' % (a, i) + extra_args.append(dn) + vars[dn] = dv + v['dimension'][i] = dn + rout['args'].extend(extra_args) + need_interface = bool(extra_args) + + ret = [''] + + def add(line, ret=ret): + ret[0] = '%s\n %s' % (ret[0], line) + name = rout['name'] + fortranname = getfortranname(rout) + f90mode = ismoduleroutine(rout) + newname = '%sf2pywrap' % (name) + + if newname not in vars: + vars[newname] = vars[name] + args = [newname] + rout['args'][1:] + else: + args = [newname] + rout['args'] + + l_tmpl = var2fixfortran(vars, name, '@@@NAME@@@', f90mode) + if l_tmpl[:13] == 'character*(*)': + if f90mode: + l_tmpl = 'character(len=10)' + l_tmpl[13:] + else: + l_tmpl = 'character*10' + l_tmpl[13:] + charselect = vars[name]['charselector'] + if charselect.get('*', '') == '(*)': + charselect['*'] = '10' + + l1 = l_tmpl.replace('@@@NAME@@@', newname) + rl = None + + useisoc = useiso_c_binding(rout) + sargs = ', '.join(args) + if f90mode: + # gh-23598 fix warning + # Essentially, this gets called again with modules where the name of the + # function is added to the arguments, which is not required, and removed + sargs = sargs.replace(f"{name}, ", '') + args = [arg for arg in args if arg != name] + rout['args'] = args + add('subroutine f2pywrap_%s_%s (%s)' % + (rout['modulename'], name, sargs)) + if not signature: + add('use %s, only : %s' % (rout['modulename'], fortranname)) + if useisoc: + add('use iso_c_binding') + else: + add('subroutine f2pywrap%s (%s)' % (name, sargs)) + if useisoc: + add('use iso_c_binding') + if not need_interface: + add('external %s' % (fortranname)) + rl = l_tmpl.replace('@@@NAME@@@', '') + ' ' + fortranname + + if need_interface: + for line in rout['saved_interface'].split('\n'): + if line.lstrip().startswith('use ') and '__user__' not in line: + add(line) + + args = args[1:] + dumped_args = [] + for a in args: + if isexternal(vars[a]): + add('external %s' % (a)) + dumped_args.append(a) + for a in args: + if a in dumped_args: + continue + if isscalar(vars[a]): + add(var2fixfortran(vars, a, f90mode=f90mode)) + dumped_args.append(a) + for a in args: + if a in dumped_args: + continue + if isintent_in(vars[a]): + add(var2fixfortran(vars, a, f90mode=f90mode)) + dumped_args.append(a) + for a in args: + if a in dumped_args: + continue + add(var2fixfortran(vars, a, f90mode=f90mode)) + + add(l1) + if rl is not None: + add(rl) + + if need_interface: + if f90mode: + # f90 module already defines needed interface + pass + else: + add('interface') + add(rout['saved_interface'].lstrip()) + add('end interface') + + sargs = ', '.join([a for a in args if a not in extra_args]) + + if not signature: + if islogicalfunction(rout): + add('%s = .not.(.not.%s(%s))' % (newname, fortranname, sargs)) + else: + add('%s = %s(%s)' % (newname, fortranname, sargs)) + if f90mode: + add('end subroutine f2pywrap_%s_%s' % (rout['modulename'], name)) + else: + add('end') + return ret[0] + + +def createsubrwrapper(rout, signature=0): + assert issubroutine(rout) + + extra_args = [] + vars = rout['vars'] + for a in rout['args']: + v = rout['vars'][a] + for i, d in enumerate(v.get('dimension', [])): + if d == ':': + dn = 'f2py_%s_d%s' % (a, i) + dv = dict(typespec='integer', intent=['hide']) + dv['='] = 'shape(%s, %s)' % (a, i) + extra_args.append(dn) + vars[dn] = dv + v['dimension'][i] = dn + rout['args'].extend(extra_args) + need_interface = bool(extra_args) + + ret = [''] + + def add(line, ret=ret): + ret[0] = '%s\n %s' % (ret[0], line) + name = rout['name'] + fortranname = getfortranname(rout) + f90mode = ismoduleroutine(rout) + + args = rout['args'] + + useisoc = useiso_c_binding(rout) + sargs = ', '.join(args) + if f90mode: + add('subroutine f2pywrap_%s_%s (%s)' % + (rout['modulename'], name, sargs)) + if useisoc: + add('use iso_c_binding') + if not signature: + add('use %s, only : %s' % (rout['modulename'], fortranname)) + else: + add('subroutine f2pywrap%s (%s)' % (name, sargs)) + if useisoc: + add('use iso_c_binding') + if not need_interface: + add('external %s' % (fortranname)) + + if need_interface: + for line in rout['saved_interface'].split('\n'): + if line.lstrip().startswith('use ') and '__user__' not in line: + add(line) + + dumped_args = [] + for a in args: + if isexternal(vars[a]): + add('external %s' % (a)) + dumped_args.append(a) + for a in args: + if a in dumped_args: + continue + if isscalar(vars[a]): + add(var2fixfortran(vars, a, f90mode=f90mode)) + dumped_args.append(a) + for a in args: + if a in dumped_args: + continue + add(var2fixfortran(vars, a, f90mode=f90mode)) + + if need_interface: + if f90mode: + # f90 module already defines needed interface + pass + else: + add('interface') + for line in rout['saved_interface'].split('\n'): + if line.lstrip().startswith('use ') and '__user__' in line: + continue + add(line) + add('end interface') + + sargs = ', '.join([a for a in args if a not in extra_args]) + + if not signature: + add('call %s(%s)' % (fortranname, sargs)) + if f90mode: + add('end subroutine f2pywrap_%s_%s' % (rout['modulename'], name)) + else: + add('end') + return ret[0] + + +def assubr(rout): + if isfunction_wrap(rout): + fortranname = getfortranname(rout) + name = rout['name'] + outmess('\t\tCreating wrapper for Fortran function "%s"("%s")...\n' % ( + name, fortranname)) + rout = copy.copy(rout) + fname = name + rname = fname + if 'result' in rout: + rname = rout['result'] + rout['vars'][fname] = rout['vars'][rname] + fvar = rout['vars'][fname] + if not isintent_out(fvar): + if 'intent' not in fvar: + fvar['intent'] = [] + fvar['intent'].append('out') + flag = 1 + for i in fvar['intent']: + if i.startswith('out='): + flag = 0 + break + if flag: + fvar['intent'].append('out=%s' % (rname)) + rout['args'][:] = [fname] + rout['args'] + return rout, createfuncwrapper(rout) + if issubroutine_wrap(rout): + fortranname = getfortranname(rout) + name = rout['name'] + outmess('\t\tCreating wrapper for Fortran subroutine "%s"("%s")...\n' + % (name, fortranname)) + rout = copy.copy(rout) + return rout, createsubrwrapper(rout) + return rout, '' diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/rules.py b/venv/lib/python3.12/site-packages/numpy/f2py/rules.py new file mode 100644 index 0000000000000000000000000000000000000000..009365e047614f892aa783876f79eeb46bb00551 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/rules.py @@ -0,0 +1,1568 @@ +#!/usr/bin/env python3 +""" + +Rules for building C/API module with f2py2e. + +Here is a skeleton of a new wrapper function (13Dec2001): + +wrapper_function(args) + declarations + get_python_arguments, say, `a' and `b' + + get_a_from_python + if (successful) { + + get_b_from_python + if (successful) { + + callfortran + if (successful) { + + put_a_to_python + if (successful) { + + put_b_to_python + if (successful) { + + buildvalue = ... + + } + + } + + } + + } + cleanup_b + + } + cleanup_a + + return buildvalue + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +import os, sys +import time +import copy +from pathlib import Path + +# __version__.version is now the same as the NumPy version +from . import __version__ + +from .auxfuncs import ( + applyrules, debugcapi, dictappend, errmess, gentitle, getargs2, + hascallstatement, hasexternals, hasinitvalue, hasnote, + hasresultnote, isarray, isarrayofstrings, ischaracter, + ischaracterarray, ischaracter_or_characterarray, iscomplex, + iscomplexarray, iscomplexfunction, iscomplexfunction_warn, + isdummyroutine, isexternal, isfunction, isfunction_wrap, isint1, + isint1array, isintent_aux, isintent_c, isintent_callback, + isintent_copy, isintent_hide, isintent_inout, isintent_nothide, + isintent_out, isintent_overwrite, islogical, islong_complex, + islong_double, islong_doublefunction, islong_long, + islong_longfunction, ismoduleroutine, isoptional, isrequired, + isscalar, issigned_long_longarray, isstring, isstringarray, + isstringfunction, issubroutine, isattr_value, + issubroutine_wrap, isthreadsafe, isunsigned, isunsigned_char, + isunsigned_chararray, isunsigned_long_long, + isunsigned_long_longarray, isunsigned_short, isunsigned_shortarray, + l_and, l_not, l_or, outmess, replace, stripcomma, requiresf90wrapper +) + +from . import capi_maps +from . import cfuncs +from . import common_rules +from . import use_rules +from . import f90mod_rules +from . import func2subr + +f2py_version = __version__.version +numpy_version = __version__.version + +options = {} +sepdict = {} +# for k in ['need_cfuncs']: sepdict[k]=',' +for k in ['decl', + 'frompyobj', + 'cleanupfrompyobj', + 'topyarr', 'method', + 'pyobjfrom', 'closepyobjfrom', + 'freemem', + 'userincludes', + 'includes0', 'includes', 'typedefs', 'typedefs_generated', + 'cppmacros', 'cfuncs', 'callbacks', + 'latexdoc', + 'restdoc', + 'routine_defs', 'externroutines', + 'initf2pywraphooks', + 'commonhooks', 'initcommonhooks', + 'f90modhooks', 'initf90modhooks']: + sepdict[k] = '\n' + +#################### Rules for C/API module ################# + +generationtime = int(os.environ.get('SOURCE_DATE_EPOCH', time.time())) +module_rules = { + 'modulebody': """\ +/* File: #modulename#module.c + * This file is auto-generated with f2py (version:#f2py_version#). + * f2py is a Fortran to Python Interface Generator (FPIG), Second Edition, + * written by Pearu Peterson . + * Generation date: """ + time.asctime(time.gmtime(generationtime)) + """ + * Do not edit this file directly unless you know what you are doing!!! + */ + +#ifdef __cplusplus +extern \"C\" { +#endif + +#ifndef PY_SSIZE_T_CLEAN +#define PY_SSIZE_T_CLEAN +#endif /* PY_SSIZE_T_CLEAN */ + +/* Unconditionally included */ +#include +#include + +""" + gentitle("See f2py2e/cfuncs.py: includes") + """ +#includes# +#includes0# + +""" + gentitle("See f2py2e/rules.py: mod_rules['modulebody']") + """ +static PyObject *#modulename#_error; +static PyObject *#modulename#_module; + +""" + gentitle("See f2py2e/cfuncs.py: typedefs") + """ +#typedefs# + +""" + gentitle("See f2py2e/cfuncs.py: typedefs_generated") + """ +#typedefs_generated# + +""" + gentitle("See f2py2e/cfuncs.py: cppmacros") + """ +#cppmacros# + +""" + gentitle("See f2py2e/cfuncs.py: cfuncs") + """ +#cfuncs# + +""" + gentitle("See f2py2e/cfuncs.py: userincludes") + """ +#userincludes# + +""" + gentitle("See f2py2e/capi_rules.py: usercode") + """ +#usercode# + +/* See f2py2e/rules.py */ +#externroutines# + +""" + gentitle("See f2py2e/capi_rules.py: usercode1") + """ +#usercode1# + +""" + gentitle("See f2py2e/cb_rules.py: buildcallback") + """ +#callbacks# + +""" + gentitle("See f2py2e/rules.py: buildapi") + """ +#body# + +""" + gentitle("See f2py2e/f90mod_rules.py: buildhooks") + """ +#f90modhooks# + +""" + gentitle("See f2py2e/rules.py: module_rules['modulebody']") + """ + +""" + gentitle("See f2py2e/common_rules.py: buildhooks") + """ +#commonhooks# + +""" + gentitle("See f2py2e/rules.py") + """ + +static FortranDataDef f2py_routine_defs[] = { +#routine_defs# + {NULL} +}; + +static PyMethodDef f2py_module_methods[] = { +#pymethoddef# + {NULL,NULL} +}; + +static struct PyModuleDef moduledef = { + PyModuleDef_HEAD_INIT, + "#modulename#", + NULL, + -1, + f2py_module_methods, + NULL, + NULL, + NULL, + NULL +}; + +PyMODINIT_FUNC PyInit_#modulename#(void) { + int i; + PyObject *m,*d, *s, *tmp; + m = #modulename#_module = PyModule_Create(&moduledef); + Py_SET_TYPE(&PyFortran_Type, &PyType_Type); + import_array(); + if (PyErr_Occurred()) + {PyErr_SetString(PyExc_ImportError, \"can't initialize module #modulename# (failed to import numpy)\"); return m;} + d = PyModule_GetDict(m); + s = PyUnicode_FromString(\"#f2py_version#\"); + PyDict_SetItemString(d, \"__version__\", s); + Py_DECREF(s); + s = PyUnicode_FromString( + \"This module '#modulename#' is auto-generated with f2py (version:#f2py_version#).\\nFunctions:\\n\"\n#docs#\".\"); + PyDict_SetItemString(d, \"__doc__\", s); + Py_DECREF(s); + s = PyUnicode_FromString(\"""" + numpy_version + """\"); + PyDict_SetItemString(d, \"__f2py_numpy_version__\", s); + Py_DECREF(s); + #modulename#_error = PyErr_NewException (\"#modulename#.error\", NULL, NULL); + /* + * Store the error object inside the dict, so that it could get deallocated. + * (in practice, this is a module, so it likely will not and cannot.) + */ + PyDict_SetItemString(d, \"_#modulename#_error\", #modulename#_error); + Py_DECREF(#modulename#_error); + for(i=0;f2py_routine_defs[i].name!=NULL;i++) { + tmp = PyFortranObject_NewAsAttr(&f2py_routine_defs[i]); + PyDict_SetItemString(d, f2py_routine_defs[i].name, tmp); + Py_DECREF(tmp); + } +#initf2pywraphooks# +#initf90modhooks# +#initcommonhooks# +#interface_usercode# + +#ifdef F2PY_REPORT_ATEXIT + if (! PyErr_Occurred()) + on_exit(f2py_report_on_exit,(void*)\"#modulename#\"); +#endif + return m; +} +#ifdef __cplusplus +} +#endif +""", + 'separatorsfor': {'latexdoc': '\n\n', + 'restdoc': '\n\n'}, + 'latexdoc': ['\\section{Module \\texttt{#texmodulename#}}\n', + '#modnote#\n', + '#latexdoc#'], + 'restdoc': ['Module #modulename#\n' + '=' * 80, + '\n#restdoc#'] +} + +defmod_rules = [ + {'body': '/*eof body*/', + 'method': '/*eof method*/', + 'externroutines': '/*eof externroutines*/', + 'routine_defs': '/*eof routine_defs*/', + 'initf90modhooks': '/*eof initf90modhooks*/', + 'initf2pywraphooks': '/*eof initf2pywraphooks*/', + 'initcommonhooks': '/*eof initcommonhooks*/', + 'latexdoc': '', + 'restdoc': '', + 'modnote': {hasnote: '#note#', l_not(hasnote): ''}, + } +] + +routine_rules = { + 'separatorsfor': sepdict, + 'body': """ +#begintitle# +static char doc_#apiname#[] = \"\\\n#docreturn##name#(#docsignatureshort#)\\n\\nWrapper for ``#name#``.\\\n\\n#docstrsigns#\"; +/* #declfortranroutine# */ +static PyObject *#apiname#(const PyObject *capi_self, + PyObject *capi_args, + PyObject *capi_keywds, + #functype# (*f2py_func)(#callprotoargument#)) { + PyObject * volatile capi_buildvalue = NULL; + volatile int f2py_success = 1; +#decl# + static char *capi_kwlist[] = {#kwlist##kwlistopt##kwlistxa#NULL}; +#usercode# +#routdebugenter# +#ifdef F2PY_REPORT_ATEXIT +f2py_start_clock(); +#endif + if (!PyArg_ParseTupleAndKeywords(capi_args,capi_keywds,\\ + \"#argformat#|#keyformat##xaformat#:#pyname#\",\\ + capi_kwlist#args_capi##keys_capi##keys_xa#))\n return NULL; +#frompyobj# +/*end of frompyobj*/ +#ifdef F2PY_REPORT_ATEXIT +f2py_start_call_clock(); +#endif +#callfortranroutine# +if (PyErr_Occurred()) + f2py_success = 0; +#ifdef F2PY_REPORT_ATEXIT +f2py_stop_call_clock(); +#endif +/*end of callfortranroutine*/ + if (f2py_success) { +#pyobjfrom# +/*end of pyobjfrom*/ + CFUNCSMESS(\"Building return value.\\n\"); + capi_buildvalue = Py_BuildValue(\"#returnformat#\"#return#); +/*closepyobjfrom*/ +#closepyobjfrom# + } /*if (f2py_success) after callfortranroutine*/ +/*cleanupfrompyobj*/ +#cleanupfrompyobj# + if (capi_buildvalue == NULL) { +#routdebugfailure# + } else { +#routdebugleave# + } + CFUNCSMESS(\"Freeing memory.\\n\"); +#freemem# +#ifdef F2PY_REPORT_ATEXIT +f2py_stop_clock(); +#endif + return capi_buildvalue; +} +#endtitle# +""", + 'routine_defs': '#routine_def#', + 'initf2pywraphooks': '#initf2pywraphook#', + 'externroutines': '#declfortranroutine#', + 'doc': '#docreturn##name#(#docsignature#)', + 'docshort': '#docreturn##name#(#docsignatureshort#)', + 'docs': '" #docreturn##name#(#docsignature#)\\n"\n', + 'need': ['arrayobject.h', 'CFUNCSMESS', 'MINMAX'], + 'cppmacros': {debugcapi: '#define DEBUGCFUNCS'}, + 'latexdoc': ['\\subsection{Wrapper function \\texttt{#texname#}}\n', + """ +\\noindent{{}\\verb@#docreturn##name#@{}}\\texttt{(#latexdocsignatureshort#)} +#routnote# + +#latexdocstrsigns# +"""], + 'restdoc': ['Wrapped function ``#name#``\n' + '-' * 80, + + ] +} + +################## Rules for C/API function ############## + +rout_rules = [ + { # Init + 'separatorsfor': {'callfortranroutine': '\n', 'routdebugenter': '\n', 'decl': '\n', + 'routdebugleave': '\n', 'routdebugfailure': '\n', + 'setjmpbuf': ' || ', + 'docstrreq': '\n', 'docstropt': '\n', 'docstrout': '\n', + 'docstrcbs': '\n', 'docstrsigns': '\\n"\n"', + 'latexdocstrsigns': '\n', + 'latexdocstrreq': '\n', 'latexdocstropt': '\n', + 'latexdocstrout': '\n', 'latexdocstrcbs': '\n', + }, + 'kwlist': '', 'kwlistopt': '', 'callfortran': '', 'callfortranappend': '', + 'docsign': '', 'docsignopt': '', 'decl': '/*decl*/', + 'freemem': '/*freemem*/', + 'docsignshort': '', 'docsignoptshort': '', + 'docstrsigns': '', 'latexdocstrsigns': '', + 'docstrreq': '\\nParameters\\n----------', + 'docstropt': '\\nOther Parameters\\n----------------', + 'docstrout': '\\nReturns\\n-------', + 'docstrcbs': '\\nNotes\\n-----\\nCall-back functions::\\n', + 'latexdocstrreq': '\\noindent Required arguments:', + 'latexdocstropt': '\\noindent Optional arguments:', + 'latexdocstrout': '\\noindent Return objects:', + 'latexdocstrcbs': '\\noindent Call-back functions:', + 'args_capi': '', 'keys_capi': '', 'functype': '', + 'frompyobj': '/*frompyobj*/', + # this list will be reversed + 'cleanupfrompyobj': ['/*end of cleanupfrompyobj*/'], + 'pyobjfrom': '/*pyobjfrom*/', + # this list will be reversed + 'closepyobjfrom': ['/*end of closepyobjfrom*/'], + 'topyarr': '/*topyarr*/', 'routdebugleave': '/*routdebugleave*/', + 'routdebugenter': '/*routdebugenter*/', + 'routdebugfailure': '/*routdebugfailure*/', + 'callfortranroutine': '/*callfortranroutine*/', + 'argformat': '', 'keyformat': '', 'need_cfuncs': '', + 'docreturn': '', 'return': '', 'returnformat': '', 'rformat': '', + 'kwlistxa': '', 'keys_xa': '', 'xaformat': '', 'docsignxa': '', 'docsignxashort': '', + 'initf2pywraphook': '', + 'routnote': {hasnote: '--- #note#', l_not(hasnote): ''}, + }, { + 'apiname': 'f2py_rout_#modulename#_#name#', + 'pyname': '#modulename#.#name#', + 'decl': '', + '_check': l_not(ismoduleroutine) + }, { + 'apiname': 'f2py_rout_#modulename#_#f90modulename#_#name#', + 'pyname': '#modulename#.#f90modulename#.#name#', + 'decl': '', + '_check': ismoduleroutine + }, { # Subroutine + 'functype': 'void', + 'declfortranroutine': {l_and(l_not(l_or(ismoduleroutine, isintent_c)), l_not(isdummyroutine)): 'extern void #F_FUNC#(#fortranname#,#FORTRANNAME#)(#callprotoargument#);', + l_and(l_not(ismoduleroutine), isintent_c, l_not(isdummyroutine)): 'extern void #fortranname#(#callprotoargument#);', + ismoduleroutine: '', + isdummyroutine: '' + }, + 'routine_def': { + l_not(l_or(ismoduleroutine, isintent_c, isdummyroutine)): + ' {\"#name#\",-1,{{-1}},0,0,(char *)' + ' #F_FUNC#(#fortranname#,#FORTRANNAME#),' + ' (f2py_init_func)#apiname#,doc_#apiname#},', + l_and(l_not(ismoduleroutine), isintent_c, l_not(isdummyroutine)): + ' {\"#name#\",-1,{{-1}},0,0,(char *)#fortranname#,' + ' (f2py_init_func)#apiname#,doc_#apiname#},', + l_and(l_not(ismoduleroutine), isdummyroutine): + ' {\"#name#\",-1,{{-1}},0,0,NULL,' + ' (f2py_init_func)#apiname#,doc_#apiname#},', + }, + 'need': {l_and(l_not(l_or(ismoduleroutine, isintent_c)), l_not(isdummyroutine)): 'F_FUNC'}, + 'callfortranroutine': [ + {debugcapi: [ + """ fprintf(stderr,\"debug-capi:Fortran subroutine `#fortranname#(#callfortran#)\'\\n\");"""]}, + {hasexternals: """\ + if (#setjmpbuf#) { + f2py_success = 0; + } else {"""}, + {isthreadsafe: ' Py_BEGIN_ALLOW_THREADS'}, + {hascallstatement: ''' #callstatement#; + /*(*f2py_func)(#callfortran#);*/'''}, + {l_not(l_or(hascallstatement, isdummyroutine)) + : ' (*f2py_func)(#callfortran#);'}, + {isthreadsafe: ' Py_END_ALLOW_THREADS'}, + {hasexternals: """ }"""} + ], + '_check': l_and(issubroutine, l_not(issubroutine_wrap)), + }, { # Wrapped function + 'functype': 'void', + 'declfortranroutine': {l_not(l_or(ismoduleroutine, isdummyroutine)): 'extern void #F_WRAPPEDFUNC#(#name_lower#,#NAME#)(#callprotoargument#);', + isdummyroutine: '', + }, + + 'routine_def': { + l_not(l_or(ismoduleroutine, isdummyroutine)): + ' {\"#name#\",-1,{{-1}},0,0,(char *)' + ' #F_WRAPPEDFUNC#(#name_lower#,#NAME#),' + ' (f2py_init_func)#apiname#,doc_#apiname#},', + isdummyroutine: + ' {\"#name#\",-1,{{-1}},0,0,NULL,' + ' (f2py_init_func)#apiname#,doc_#apiname#},', + }, + 'initf2pywraphook': {l_not(l_or(ismoduleroutine, isdummyroutine)): ''' + { + extern #ctype# #F_FUNC#(#name_lower#,#NAME#)(void); + PyObject* o = PyDict_GetItemString(d,"#name#"); + tmp = F2PyCapsule_FromVoidPtr((void*)#F_FUNC#(#name_lower#,#NAME#),NULL); + PyObject_SetAttrString(o,"_cpointer", tmp); + Py_DECREF(tmp); + s = PyUnicode_FromString("#name#"); + PyObject_SetAttrString(o,"__name__", s); + Py_DECREF(s); + } + '''}, + 'need': {l_not(l_or(ismoduleroutine, isdummyroutine)): ['F_WRAPPEDFUNC', 'F_FUNC']}, + 'callfortranroutine': [ + {debugcapi: [ + """ fprintf(stderr,\"debug-capi:Fortran subroutine `f2pywrap#name_lower#(#callfortran#)\'\\n\");"""]}, + {hasexternals: """\ + if (#setjmpbuf#) { + f2py_success = 0; + } else {"""}, + {isthreadsafe: ' Py_BEGIN_ALLOW_THREADS'}, + {l_not(l_or(hascallstatement, isdummyroutine)) + : ' (*f2py_func)(#callfortran#);'}, + {hascallstatement: + ' #callstatement#;\n /*(*f2py_func)(#callfortran#);*/'}, + {isthreadsafe: ' Py_END_ALLOW_THREADS'}, + {hasexternals: ' }'} + ], + '_check': isfunction_wrap, + }, { # Wrapped subroutine + 'functype': 'void', + 'declfortranroutine': {l_not(l_or(ismoduleroutine, isdummyroutine)): 'extern void #F_WRAPPEDFUNC#(#name_lower#,#NAME#)(#callprotoargument#);', + isdummyroutine: '', + }, + + 'routine_def': { + l_not(l_or(ismoduleroutine, isdummyroutine)): + ' {\"#name#\",-1,{{-1}},0,0,(char *)' + ' #F_WRAPPEDFUNC#(#name_lower#,#NAME#),' + ' (f2py_init_func)#apiname#,doc_#apiname#},', + isdummyroutine: + ' {\"#name#\",-1,{{-1}},0,0,NULL,' + ' (f2py_init_func)#apiname#,doc_#apiname#},', + }, + 'initf2pywraphook': {l_not(l_or(ismoduleroutine, isdummyroutine)): ''' + { + extern void #F_FUNC#(#name_lower#,#NAME#)(void); + PyObject* o = PyDict_GetItemString(d,"#name#"); + tmp = F2PyCapsule_FromVoidPtr((void*)#F_FUNC#(#name_lower#,#NAME#),NULL); + PyObject_SetAttrString(o,"_cpointer", tmp); + Py_DECREF(tmp); + s = PyUnicode_FromString("#name#"); + PyObject_SetAttrString(o,"__name__", s); + Py_DECREF(s); + } + '''}, + 'need': {l_not(l_or(ismoduleroutine, isdummyroutine)): ['F_WRAPPEDFUNC', 'F_FUNC']}, + 'callfortranroutine': [ + {debugcapi: [ + """ fprintf(stderr,\"debug-capi:Fortran subroutine `f2pywrap#name_lower#(#callfortran#)\'\\n\");"""]}, + {hasexternals: """\ + if (#setjmpbuf#) { + f2py_success = 0; + } else {"""}, + {isthreadsafe: ' Py_BEGIN_ALLOW_THREADS'}, + {l_not(l_or(hascallstatement, isdummyroutine)) + : ' (*f2py_func)(#callfortran#);'}, + {hascallstatement: + ' #callstatement#;\n /*(*f2py_func)(#callfortran#);*/'}, + {isthreadsafe: ' Py_END_ALLOW_THREADS'}, + {hasexternals: ' }'} + ], + '_check': issubroutine_wrap, + }, { # Function + 'functype': '#ctype#', + 'docreturn': {l_not(isintent_hide): '#rname#,'}, + 'docstrout': '#pydocsignout#', + 'latexdocstrout': ['\\item[]{{}\\verb@#pydocsignout#@{}}', + {hasresultnote: '--- #resultnote#'}], + 'callfortranroutine': [{l_and(debugcapi, isstringfunction): """\ +#ifdef USESCOMPAQFORTRAN + fprintf(stderr,\"debug-capi:Fortran function #ctype# #fortranname#(#callcompaqfortran#)\\n\"); +#else + fprintf(stderr,\"debug-capi:Fortran function #ctype# #fortranname#(#callfortran#)\\n\"); +#endif +"""}, + {l_and(debugcapi, l_not(isstringfunction)): """\ + fprintf(stderr,\"debug-capi:Fortran function #ctype# #fortranname#(#callfortran#)\\n\"); +"""} + ], + '_check': l_and(isfunction, l_not(isfunction_wrap)) + }, { # Scalar function + 'declfortranroutine': {l_and(l_not(l_or(ismoduleroutine, isintent_c)), l_not(isdummyroutine)): 'extern #ctype# #F_FUNC#(#fortranname#,#FORTRANNAME#)(#callprotoargument#);', + l_and(l_not(ismoduleroutine), isintent_c, l_not(isdummyroutine)): 'extern #ctype# #fortranname#(#callprotoargument#);', + isdummyroutine: '' + }, + 'routine_def': { + l_and(l_not(l_or(ismoduleroutine, isintent_c)), + l_not(isdummyroutine)): + (' {\"#name#\",-1,{{-1}},0,0,(char *)' + ' #F_FUNC#(#fortranname#,#FORTRANNAME#),' + ' (f2py_init_func)#apiname#,doc_#apiname#},'), + l_and(l_not(ismoduleroutine), isintent_c, l_not(isdummyroutine)): + (' {\"#name#\",-1,{{-1}},0,0,(char *)#fortranname#,' + ' (f2py_init_func)#apiname#,doc_#apiname#},'), + isdummyroutine: + ' {\"#name#\",-1,{{-1}},0,0,NULL,' + '(f2py_init_func)#apiname#,doc_#apiname#},', + }, + 'decl': [{iscomplexfunction_warn: ' #ctype# #name#_return_value={0,0};', + l_not(iscomplexfunction): ' #ctype# #name#_return_value=0;'}, + {iscomplexfunction: + ' PyObject *#name#_return_value_capi = Py_None;'} + ], + 'callfortranroutine': [ + {hasexternals: """\ + if (#setjmpbuf#) { + f2py_success = 0; + } else {"""}, + {isthreadsafe: ' Py_BEGIN_ALLOW_THREADS'}, + {hascallstatement: ''' #callstatement#; +/* #name#_return_value = (*f2py_func)(#callfortran#);*/ +'''}, + {l_not(l_or(hascallstatement, isdummyroutine)) + : ' #name#_return_value = (*f2py_func)(#callfortran#);'}, + {isthreadsafe: ' Py_END_ALLOW_THREADS'}, + {hasexternals: ' }'}, + {l_and(debugcapi, iscomplexfunction) + : ' fprintf(stderr,"#routdebugshowvalue#\\n",#name#_return_value.r,#name#_return_value.i);'}, + {l_and(debugcapi, l_not(iscomplexfunction)): ' fprintf(stderr,"#routdebugshowvalue#\\n",#name#_return_value);'}], + 'pyobjfrom': {iscomplexfunction: ' #name#_return_value_capi = pyobj_from_#ctype#1(#name#_return_value);'}, + 'need': [{l_not(isdummyroutine): 'F_FUNC'}, + {iscomplexfunction: 'pyobj_from_#ctype#1'}, + {islong_longfunction: 'long_long'}, + {islong_doublefunction: 'long_double'}], + 'returnformat': {l_not(isintent_hide): '#rformat#'}, + 'return': {iscomplexfunction: ',#name#_return_value_capi', + l_not(l_or(iscomplexfunction, isintent_hide)): ',#name#_return_value'}, + '_check': l_and(isfunction, l_not(isstringfunction), l_not(isfunction_wrap)) + }, { # String function # in use for --no-wrap + 'declfortranroutine': 'extern void #F_FUNC#(#fortranname#,#FORTRANNAME#)(#callprotoargument#);', + 'routine_def': {l_not(l_or(ismoduleroutine, isintent_c)): + ' {\"#name#\",-1,{{-1}},0,0,(char *)#F_FUNC#(#fortranname#,#FORTRANNAME#),(f2py_init_func)#apiname#,doc_#apiname#},', + l_and(l_not(ismoduleroutine), isintent_c): + ' {\"#name#\",-1,{{-1}},0,0,(char *)#fortranname#,(f2py_init_func)#apiname#,doc_#apiname#},' + }, + 'decl': [' #ctype# #name#_return_value = NULL;', + ' int #name#_return_value_len = 0;'], + 'callfortran':'#name#_return_value,#name#_return_value_len,', + 'callfortranroutine':[' #name#_return_value_len = #rlength#;', + ' if ((#name#_return_value = (string)malloc(' + + '#name#_return_value_len+1) == NULL) {', + ' PyErr_SetString(PyExc_MemoryError, \"out of memory\");', + ' f2py_success = 0;', + ' } else {', + " (#name#_return_value)[#name#_return_value_len] = '\\0';", + ' }', + ' if (f2py_success) {', + {hasexternals: """\ + if (#setjmpbuf#) { + f2py_success = 0; + } else {"""}, + {isthreadsafe: ' Py_BEGIN_ALLOW_THREADS'}, + """\ +#ifdef USESCOMPAQFORTRAN + (*f2py_func)(#callcompaqfortran#); +#else + (*f2py_func)(#callfortran#); +#endif +""", + {isthreadsafe: ' Py_END_ALLOW_THREADS'}, + {hasexternals: ' }'}, + {debugcapi: + ' fprintf(stderr,"#routdebugshowvalue#\\n",#name#_return_value_len,#name#_return_value);'}, + ' } /* if (f2py_success) after (string)malloc */', + ], + 'returnformat': '#rformat#', + 'return': ',#name#_return_value', + 'freemem': ' STRINGFREE(#name#_return_value);', + 'need': ['F_FUNC', '#ctype#', 'STRINGFREE'], + '_check':l_and(isstringfunction, l_not(isfunction_wrap)) # ???obsolete + }, + { # Debugging + 'routdebugenter': ' fprintf(stderr,"debug-capi:Python C/API function #modulename#.#name#(#docsignature#)\\n");', + 'routdebugleave': ' fprintf(stderr,"debug-capi:Python C/API function #modulename#.#name#: successful.\\n");', + 'routdebugfailure': ' fprintf(stderr,"debug-capi:Python C/API function #modulename#.#name#: failure.\\n");', + '_check': debugcapi + } +] + +################ Rules for arguments ################## + +typedef_need_dict = {islong_long: 'long_long', + islong_double: 'long_double', + islong_complex: 'complex_long_double', + isunsigned_char: 'unsigned_char', + isunsigned_short: 'unsigned_short', + isunsigned: 'unsigned', + isunsigned_long_long: 'unsigned_long_long', + isunsigned_chararray: 'unsigned_char', + isunsigned_shortarray: 'unsigned_short', + isunsigned_long_longarray: 'unsigned_long_long', + issigned_long_longarray: 'long_long', + isint1: 'signed_char', + ischaracter_or_characterarray: 'character', + } + +aux_rules = [ + { + 'separatorsfor': sepdict + }, + { # Common + 'frompyobj': [' /* Processing auxiliary variable #varname# */', + {debugcapi: ' fprintf(stderr,"#vardebuginfo#\\n");'}, ], + 'cleanupfrompyobj': ' /* End of cleaning variable #varname# */', + 'need': typedef_need_dict, + }, + # Scalars (not complex) + { # Common + 'decl': ' #ctype# #varname# = 0;', + 'need': {hasinitvalue: 'math.h'}, + 'frompyobj': {hasinitvalue: ' #varname# = #init#;'}, + '_check': l_and(isscalar, l_not(iscomplex)), + }, + { + 'return': ',#varname#', + 'docstrout': '#pydocsignout#', + 'docreturn': '#outvarname#,', + 'returnformat': '#varrformat#', + '_check': l_and(isscalar, l_not(iscomplex), isintent_out), + }, + # Complex scalars + { # Common + 'decl': ' #ctype# #varname#;', + 'frompyobj': {hasinitvalue: ' #varname#.r = #init.r#, #varname#.i = #init.i#;'}, + '_check': iscomplex + }, + # String + { # Common + 'decl': [' #ctype# #varname# = NULL;', + ' int slen(#varname#);', + ], + 'need':['len..'], + '_check':isstring + }, + # Array + { # Common + 'decl': [' #ctype# *#varname# = NULL;', + ' npy_intp #varname#_Dims[#rank#] = {#rank*[-1]#};', + ' const int #varname#_Rank = #rank#;', + ], + 'need':['len..', {hasinitvalue: 'forcomb'}, {hasinitvalue: 'CFUNCSMESS'}], + '_check': isarray + }, + # Scalararray + { # Common + '_check': l_and(isarray, l_not(iscomplexarray)) + }, { # Not hidden + '_check': l_and(isarray, l_not(iscomplexarray), isintent_nothide) + }, + # Integer*1 array + {'need': '#ctype#', + '_check': isint1array, + '_depend': '' + }, + # Integer*-1 array + {'need': '#ctype#', + '_check': l_or(isunsigned_chararray, isunsigned_char), + '_depend': '' + }, + # Integer*-2 array + {'need': '#ctype#', + '_check': isunsigned_shortarray, + '_depend': '' + }, + # Integer*-8 array + {'need': '#ctype#', + '_check': isunsigned_long_longarray, + '_depend': '' + }, + # Complexarray + {'need': '#ctype#', + '_check': iscomplexarray, + '_depend': '' + }, + # Stringarray + { + 'callfortranappend': {isarrayofstrings: 'flen(#varname#),'}, + 'need': 'string', + '_check': isstringarray + } +] + +arg_rules = [ + { + 'separatorsfor': sepdict + }, + { # Common + 'frompyobj': [' /* Processing variable #varname# */', + {debugcapi: ' fprintf(stderr,"#vardebuginfo#\\n");'}, ], + 'cleanupfrompyobj': ' /* End of cleaning variable #varname# */', + '_depend': '', + 'need': typedef_need_dict, + }, + # Doc signatures + { + 'docstropt': {l_and(isoptional, isintent_nothide): '#pydocsign#'}, + 'docstrreq': {l_and(isrequired, isintent_nothide): '#pydocsign#'}, + 'docstrout': {isintent_out: '#pydocsignout#'}, + 'latexdocstropt': {l_and(isoptional, isintent_nothide): ['\\item[]{{}\\verb@#pydocsign#@{}}', + {hasnote: '--- #note#'}]}, + 'latexdocstrreq': {l_and(isrequired, isintent_nothide): ['\\item[]{{}\\verb@#pydocsign#@{}}', + {hasnote: '--- #note#'}]}, + 'latexdocstrout': {isintent_out: ['\\item[]{{}\\verb@#pydocsignout#@{}}', + {l_and(hasnote, isintent_hide): '--- #note#', + l_and(hasnote, isintent_nothide): '--- See above.'}]}, + 'depend': '' + }, + # Required/Optional arguments + { + 'kwlist': '"#varname#",', + 'docsign': '#varname#,', + '_check': l_and(isintent_nothide, l_not(isoptional)) + }, + { + 'kwlistopt': '"#varname#",', + 'docsignopt': '#varname#=#showinit#,', + 'docsignoptshort': '#varname#,', + '_check': l_and(isintent_nothide, isoptional) + }, + # Docstring/BuildValue + { + 'docreturn': '#outvarname#,', + 'returnformat': '#varrformat#', + '_check': isintent_out + }, + # Externals (call-back functions) + { # Common + 'docsignxa': {isintent_nothide: '#varname#_extra_args=(),'}, + 'docsignxashort': {isintent_nothide: '#varname#_extra_args,'}, + 'docstropt': {isintent_nothide: '#varname#_extra_args : input tuple, optional\\n Default: ()'}, + 'docstrcbs': '#cbdocstr#', + 'latexdocstrcbs': '\\item[] #cblatexdocstr#', + 'latexdocstropt': {isintent_nothide: '\\item[]{{}\\verb@#varname#_extra_args := () input tuple@{}} --- Extra arguments for call-back function {{}\\verb@#varname#@{}}.'}, + 'decl': [' #cbname#_t #varname#_cb = { Py_None, NULL, 0 };', + ' #cbname#_t *#varname#_cb_ptr = &#varname#_cb;', + ' PyTupleObject *#varname#_xa_capi = NULL;', + {l_not(isintent_callback): + ' #cbname#_typedef #varname#_cptr;'} + ], + 'kwlistxa': {isintent_nothide: '"#varname#_extra_args",'}, + 'argformat': {isrequired: 'O'}, + 'keyformat': {isoptional: 'O'}, + 'xaformat': {isintent_nothide: 'O!'}, + 'args_capi': {isrequired: ',&#varname#_cb.capi'}, + 'keys_capi': {isoptional: ',&#varname#_cb.capi'}, + 'keys_xa': ',&PyTuple_Type,&#varname#_xa_capi', + 'setjmpbuf': '(setjmp(#varname#_cb.jmpbuf))', + 'callfortran': {l_not(isintent_callback): '#varname#_cptr,'}, + 'need': ['#cbname#', 'setjmp.h'], + '_check':isexternal + }, + { + 'frompyobj': [{l_not(isintent_callback): """\ +if(F2PyCapsule_Check(#varname#_cb.capi)) { + #varname#_cptr = F2PyCapsule_AsVoidPtr(#varname#_cb.capi); +} else { + #varname#_cptr = #cbname#; +} +"""}, {isintent_callback: """\ +if (#varname#_cb.capi==Py_None) { + #varname#_cb.capi = PyObject_GetAttrString(#modulename#_module,\"#varname#\"); + if (#varname#_cb.capi) { + if (#varname#_xa_capi==NULL) { + if (PyObject_HasAttrString(#modulename#_module,\"#varname#_extra_args\")) { + PyObject* capi_tmp = PyObject_GetAttrString(#modulename#_module,\"#varname#_extra_args\"); + if (capi_tmp) { + #varname#_xa_capi = (PyTupleObject *)PySequence_Tuple(capi_tmp); + Py_DECREF(capi_tmp); + } + else { + #varname#_xa_capi = (PyTupleObject *)Py_BuildValue(\"()\"); + } + if (#varname#_xa_capi==NULL) { + PyErr_SetString(#modulename#_error,\"Failed to convert #modulename#.#varname#_extra_args to tuple.\\n\"); + return NULL; + } + } + } + } + if (#varname#_cb.capi==NULL) { + PyErr_SetString(#modulename#_error,\"Callback #varname# not defined (as an argument or module #modulename# attribute).\\n\"); + return NULL; + } +} +"""}, + """\ + if (create_cb_arglist(#varname#_cb.capi,#varname#_xa_capi,#maxnofargs#,#nofoptargs#,&#varname#_cb.nofargs,&#varname#_cb.args_capi,\"failed in processing argument list for call-back #varname#.\")) { +""", + {debugcapi: ["""\ + fprintf(stderr,\"debug-capi:Assuming %d arguments; at most #maxnofargs#(-#nofoptargs#) is expected.\\n\",#varname#_cb.nofargs); + CFUNCSMESSPY(\"for #varname#=\",#varname#_cb.capi);""", + {l_not(isintent_callback): """ fprintf(stderr,\"#vardebugshowvalue# (call-back in C).\\n\",#cbname#);"""}]}, + """\ + CFUNCSMESS(\"Saving callback variables for `#varname#`.\\n\"); + #varname#_cb_ptr = swap_active_#cbname#(#varname#_cb_ptr);""", + ], + 'cleanupfrompyobj': + """\ + CFUNCSMESS(\"Restoring callback variables for `#varname#`.\\n\"); + #varname#_cb_ptr = swap_active_#cbname#(#varname#_cb_ptr); + Py_DECREF(#varname#_cb.args_capi); + }""", + 'need': ['SWAP', 'create_cb_arglist'], + '_check':isexternal, + '_depend':'' + }, + # Scalars (not complex) + { # Common + 'decl': ' #ctype# #varname# = 0;', + 'pyobjfrom': {debugcapi: ' fprintf(stderr,"#vardebugshowvalue#\\n",#varname#);'}, + 'callfortran': {l_or(isintent_c, isattr_value): '#varname#,', l_not(l_or(isintent_c, isattr_value)): '&#varname#,'}, + 'return': {isintent_out: ',#varname#'}, + '_check': l_and(isscalar, l_not(iscomplex)) + }, { + 'need': {hasinitvalue: 'math.h'}, + '_check': l_and(isscalar, l_not(iscomplex)), + }, { # Not hidden + 'decl': ' PyObject *#varname#_capi = Py_None;', + 'argformat': {isrequired: 'O'}, + 'keyformat': {isoptional: 'O'}, + 'args_capi': {isrequired: ',&#varname#_capi'}, + 'keys_capi': {isoptional: ',&#varname#_capi'}, + 'pyobjfrom': {isintent_inout: """\ + f2py_success = try_pyarr_from_#ctype#(#varname#_capi,&#varname#); + if (f2py_success) {"""}, + 'closepyobjfrom': {isintent_inout: " } /*if (f2py_success) of #varname# pyobjfrom*/"}, + 'need': {isintent_inout: 'try_pyarr_from_#ctype#'}, + '_check': l_and(isscalar, l_not(iscomplex), l_not(isstring), + isintent_nothide) + }, { + 'frompyobj': [ + # hasinitvalue... + # if pyobj is None: + # varname = init + # else + # from_pyobj(varname) + # + # isoptional and noinitvalue... + # if pyobj is not None: + # from_pyobj(varname) + # else: + # varname is uninitialized + # + # ... + # from_pyobj(varname) + # + {hasinitvalue: ' if (#varname#_capi == Py_None) #varname# = #init#; else', + '_depend': ''}, + {l_and(isoptional, l_not(hasinitvalue)): ' if (#varname#_capi != Py_None)', + '_depend': ''}, + {l_not(islogical): '''\ + f2py_success = #ctype#_from_pyobj(&#varname#,#varname#_capi,"#pyname#() #nth# (#varname#) can\'t be converted to #ctype#"); + if (f2py_success) {'''}, + {islogical: '''\ + #varname# = (#ctype#)PyObject_IsTrue(#varname#_capi); + f2py_success = 1; + if (f2py_success) {'''}, + ], + 'cleanupfrompyobj': ' } /*if (f2py_success) of #varname#*/', + 'need': {l_not(islogical): '#ctype#_from_pyobj'}, + '_check': l_and(isscalar, l_not(iscomplex), isintent_nothide), + '_depend': '' + }, { # Hidden + 'frompyobj': {hasinitvalue: ' #varname# = #init#;'}, + 'need': typedef_need_dict, + '_check': l_and(isscalar, l_not(iscomplex), isintent_hide), + '_depend': '' + }, { # Common + 'frompyobj': {debugcapi: ' fprintf(stderr,"#vardebugshowvalue#\\n",#varname#);'}, + '_check': l_and(isscalar, l_not(iscomplex)), + '_depend': '' + }, + # Complex scalars + { # Common + 'decl': ' #ctype# #varname#;', + 'callfortran': {isintent_c: '#varname#,', l_not(isintent_c): '&#varname#,'}, + 'pyobjfrom': {debugcapi: ' fprintf(stderr,"#vardebugshowvalue#\\n",#varname#.r,#varname#.i);'}, + 'return': {isintent_out: ',#varname#_capi'}, + '_check': iscomplex + }, { # Not hidden + 'decl': ' PyObject *#varname#_capi = Py_None;', + 'argformat': {isrequired: 'O'}, + 'keyformat': {isoptional: 'O'}, + 'args_capi': {isrequired: ',&#varname#_capi'}, + 'keys_capi': {isoptional: ',&#varname#_capi'}, + 'need': {isintent_inout: 'try_pyarr_from_#ctype#'}, + 'pyobjfrom': {isintent_inout: """\ + f2py_success = try_pyarr_from_#ctype#(#varname#_capi,&#varname#); + if (f2py_success) {"""}, + 'closepyobjfrom': {isintent_inout: " } /*if (f2py_success) of #varname# pyobjfrom*/"}, + '_check': l_and(iscomplex, isintent_nothide) + }, { + 'frompyobj': [{hasinitvalue: ' if (#varname#_capi==Py_None) {#varname#.r = #init.r#, #varname#.i = #init.i#;} else'}, + {l_and(isoptional, l_not(hasinitvalue)) + : ' if (#varname#_capi != Py_None)'}, + ' f2py_success = #ctype#_from_pyobj(&#varname#,#varname#_capi,"#pyname#() #nth# (#varname#) can\'t be converted to #ctype#");' + '\n if (f2py_success) {'], + 'cleanupfrompyobj': ' } /*if (f2py_success) of #varname# frompyobj*/', + 'need': ['#ctype#_from_pyobj'], + '_check': l_and(iscomplex, isintent_nothide), + '_depend': '' + }, { # Hidden + 'decl': {isintent_out: ' PyObject *#varname#_capi = Py_None;'}, + '_check': l_and(iscomplex, isintent_hide) + }, { + 'frompyobj': {hasinitvalue: ' #varname#.r = #init.r#, #varname#.i = #init.i#;'}, + '_check': l_and(iscomplex, isintent_hide), + '_depend': '' + }, { # Common + 'pyobjfrom': {isintent_out: ' #varname#_capi = pyobj_from_#ctype#1(#varname#);'}, + 'need': ['pyobj_from_#ctype#1'], + '_check': iscomplex + }, { + 'frompyobj': {debugcapi: ' fprintf(stderr,"#vardebugshowvalue#\\n",#varname#.r,#varname#.i);'}, + '_check': iscomplex, + '_depend': '' + }, + # String + { # Common + 'decl': [' #ctype# #varname# = NULL;', + ' int slen(#varname#);', + ' PyObject *#varname#_capi = Py_None;'], + 'callfortran':'#varname#,', + 'callfortranappend':'slen(#varname#),', + 'pyobjfrom':[ + {debugcapi: + ' fprintf(stderr,' + '"#vardebugshowvalue#\\n",slen(#varname#),#varname#);'}, + # The trailing null value for Fortran is blank. + {l_and(isintent_out, l_not(isintent_c)): + " STRINGPADN(#varname#, slen(#varname#), ' ', '\\0');"}, + ], + 'return': {isintent_out: ',#varname#'}, + 'need': ['len..', + {l_and(isintent_out, l_not(isintent_c)): 'STRINGPADN'}], + '_check': isstring + }, { # Common + 'frompyobj': [ + """\ + slen(#varname#) = #elsize#; + f2py_success = #ctype#_from_pyobj(&#varname#,&slen(#varname#),#init#,""" +"""#varname#_capi,\"#ctype#_from_pyobj failed in converting #nth#""" +"""`#varname#\' of #pyname# to C #ctype#\"); + if (f2py_success) {""", + # The trailing null value for Fortran is blank. + {l_not(isintent_c): + " STRINGPADN(#varname#, slen(#varname#), '\\0', ' ');"}, + ], + 'cleanupfrompyobj': """\ + STRINGFREE(#varname#); + } /*if (f2py_success) of #varname#*/""", + 'need': ['#ctype#_from_pyobj', 'len..', 'STRINGFREE', + {l_not(isintent_c): 'STRINGPADN'}], + '_check':isstring, + '_depend':'' + }, { # Not hidden + 'argformat': {isrequired: 'O'}, + 'keyformat': {isoptional: 'O'}, + 'args_capi': {isrequired: ',&#varname#_capi'}, + 'keys_capi': {isoptional: ',&#varname#_capi'}, + 'pyobjfrom': [ + {l_and(isintent_inout, l_not(isintent_c)): + " STRINGPADN(#varname#, slen(#varname#), ' ', '\\0');"}, + {isintent_inout: '''\ + f2py_success = try_pyarr_from_#ctype#(#varname#_capi, #varname#, + slen(#varname#)); + if (f2py_success) {'''}], + 'closepyobjfrom': {isintent_inout: ' } /*if (f2py_success) of #varname# pyobjfrom*/'}, + 'need': {isintent_inout: 'try_pyarr_from_#ctype#', + l_and(isintent_inout, l_not(isintent_c)): 'STRINGPADN'}, + '_check': l_and(isstring, isintent_nothide) + }, { # Hidden + '_check': l_and(isstring, isintent_hide) + }, { + 'frompyobj': {debugcapi: ' fprintf(stderr,"#vardebugshowvalue#\\n",slen(#varname#),#varname#);'}, + '_check': isstring, + '_depend': '' + }, + # Array + { # Common + 'decl': [' #ctype# *#varname# = NULL;', + ' npy_intp #varname#_Dims[#rank#] = {#rank*[-1]#};', + ' const int #varname#_Rank = #rank#;', + ' PyArrayObject *capi_#varname#_as_array = NULL;', + ' int capi_#varname#_intent = 0;', + {isstringarray: ' int slen(#varname#) = 0;'}, + ], + 'callfortran':'#varname#,', + 'callfortranappend': {isstringarray: 'slen(#varname#),'}, + 'return': {isintent_out: ',capi_#varname#_as_array'}, + 'need': 'len..', + '_check': isarray + }, { # intent(overwrite) array + 'decl': ' int capi_overwrite_#varname# = 1;', + 'kwlistxa': '"overwrite_#varname#",', + 'xaformat': 'i', + 'keys_xa': ',&capi_overwrite_#varname#', + 'docsignxa': 'overwrite_#varname#=1,', + 'docsignxashort': 'overwrite_#varname#,', + 'docstropt': 'overwrite_#varname# : input int, optional\\n Default: 1', + '_check': l_and(isarray, isintent_overwrite), + }, { + 'frompyobj': ' capi_#varname#_intent |= (capi_overwrite_#varname#?0:F2PY_INTENT_COPY);', + '_check': l_and(isarray, isintent_overwrite), + '_depend': '', + }, + { # intent(copy) array + 'decl': ' int capi_overwrite_#varname# = 0;', + 'kwlistxa': '"overwrite_#varname#",', + 'xaformat': 'i', + 'keys_xa': ',&capi_overwrite_#varname#', + 'docsignxa': 'overwrite_#varname#=0,', + 'docsignxashort': 'overwrite_#varname#,', + 'docstropt': 'overwrite_#varname# : input int, optional\\n Default: 0', + '_check': l_and(isarray, isintent_copy), + }, { + 'frompyobj': ' capi_#varname#_intent |= (capi_overwrite_#varname#?0:F2PY_INTENT_COPY);', + '_check': l_and(isarray, isintent_copy), + '_depend': '', + }, { + 'need': [{hasinitvalue: 'forcomb'}, {hasinitvalue: 'CFUNCSMESS'}], + '_check': isarray, + '_depend': '' + }, { # Not hidden + 'decl': ' PyObject *#varname#_capi = Py_None;', + 'argformat': {isrequired: 'O'}, + 'keyformat': {isoptional: 'O'}, + 'args_capi': {isrequired: ',&#varname#_capi'}, + 'keys_capi': {isoptional: ',&#varname#_capi'}, + '_check': l_and(isarray, isintent_nothide) + }, { + 'frompyobj': [ + ' #setdims#;', + ' capi_#varname#_intent |= #intent#;', + (' const char * capi_errmess = "#modulename#.#pyname#:' + ' failed to create array from the #nth# `#varname#`";'), + {isintent_hide: + ' capi_#varname#_as_array = ndarray_from_pyobj(' + ' #atype#,#elsize#,#varname#_Dims,#varname#_Rank,' + ' capi_#varname#_intent,Py_None,capi_errmess);'}, + {isintent_nothide: + ' capi_#varname#_as_array = ndarray_from_pyobj(' + ' #atype#,#elsize#,#varname#_Dims,#varname#_Rank,' + ' capi_#varname#_intent,#varname#_capi,capi_errmess);'}, + """\ + if (capi_#varname#_as_array == NULL) { + PyObject* capi_err = PyErr_Occurred(); + if (capi_err == NULL) { + capi_err = #modulename#_error; + PyErr_SetString(capi_err, capi_errmess); + } + } else { + #varname# = (#ctype# *)(PyArray_DATA(capi_#varname#_as_array)); +""", + {isstringarray: + ' slen(#varname#) = f2py_itemsize(#varname#);'}, + {hasinitvalue: [ + {isintent_nothide: + ' if (#varname#_capi == Py_None) {'}, + {isintent_hide: ' {'}, + {iscomplexarray: ' #ctype# capi_c;'}, + """\ + int *_i,capi_i=0; + CFUNCSMESS(\"#name#: Initializing #varname#=#init#\\n\"); + if (initforcomb(PyArray_DIMS(capi_#varname#_as_array), + PyArray_NDIM(capi_#varname#_as_array),1)) { + while ((_i = nextforcomb())) + #varname#[capi_i++] = #init#; /* fortran way */ + } else { + PyObject *exc, *val, *tb; + PyErr_Fetch(&exc, &val, &tb); + PyErr_SetString(exc ? exc : #modulename#_error, + \"Initialization of #nth# #varname# failed (initforcomb).\"); + npy_PyErr_ChainExceptionsCause(exc, val, tb); + f2py_success = 0; + } + } + if (f2py_success) {"""]}, + ], + 'cleanupfrompyobj': [ # note that this list will be reversed + ' } ' + '/* if (capi_#varname#_as_array == NULL) ... else of #varname# */', + {l_not(l_or(isintent_out, isintent_hide)): """\ + if((PyObject *)capi_#varname#_as_array!=#varname#_capi) { + Py_XDECREF(capi_#varname#_as_array); }"""}, + {l_and(isintent_hide, l_not(isintent_out)) + : """ Py_XDECREF(capi_#varname#_as_array);"""}, + {hasinitvalue: ' } /*if (f2py_success) of #varname# init*/'}, + ], + '_check': isarray, + '_depend': '' + }, + # Scalararray + { # Common + '_check': l_and(isarray, l_not(iscomplexarray)) + }, { # Not hidden + '_check': l_and(isarray, l_not(iscomplexarray), isintent_nothide) + }, + # Integer*1 array + {'need': '#ctype#', + '_check': isint1array, + '_depend': '' + }, + # Integer*-1 array + {'need': '#ctype#', + '_check': isunsigned_chararray, + '_depend': '' + }, + # Integer*-2 array + {'need': '#ctype#', + '_check': isunsigned_shortarray, + '_depend': '' + }, + # Integer*-8 array + {'need': '#ctype#', + '_check': isunsigned_long_longarray, + '_depend': '' + }, + # Complexarray + {'need': '#ctype#', + '_check': iscomplexarray, + '_depend': '' + }, + # Character + { + 'need': 'string', + '_check': ischaracter, + }, + # Character array + { + 'need': 'string', + '_check': ischaracterarray, + }, + # Stringarray + { + 'callfortranappend': {isarrayofstrings: 'flen(#varname#),'}, + 'need': 'string', + '_check': isstringarray + } +] + +################# Rules for checking ############### + +check_rules = [ + { + 'frompyobj': {debugcapi: ' fprintf(stderr,\"debug-capi:Checking `#check#\'\\n\");'}, + 'need': 'len..' + }, { + 'frompyobj': ' CHECKSCALAR(#check#,\"#check#\",\"#nth# #varname#\",\"#varshowvalue#\",#varname#) {', + 'cleanupfrompyobj': ' } /*CHECKSCALAR(#check#)*/', + 'need': 'CHECKSCALAR', + '_check': l_and(isscalar, l_not(iscomplex)), + '_break': '' + }, { + 'frompyobj': ' CHECKSTRING(#check#,\"#check#\",\"#nth# #varname#\",\"#varshowvalue#\",#varname#) {', + 'cleanupfrompyobj': ' } /*CHECKSTRING(#check#)*/', + 'need': 'CHECKSTRING', + '_check': isstring, + '_break': '' + }, { + 'need': 'CHECKARRAY', + 'frompyobj': ' CHECKARRAY(#check#,\"#check#\",\"#nth# #varname#\") {', + 'cleanupfrompyobj': ' } /*CHECKARRAY(#check#)*/', + '_check': isarray, + '_break': '' + }, { + 'need': 'CHECKGENERIC', + 'frompyobj': ' CHECKGENERIC(#check#,\"#check#\",\"#nth# #varname#\") {', + 'cleanupfrompyobj': ' } /*CHECKGENERIC(#check#)*/', + } +] + +########## Applying the rules. No need to modify what follows ############# + +#################### Build C/API module ####################### + + +def buildmodule(m, um): + """ + Return + """ + outmess(' Building module "%s"...\n' % (m['name'])) + ret = {} + mod_rules = defmod_rules[:] + vrd = capi_maps.modsign2map(m) + rd = dictappend({'f2py_version': f2py_version}, vrd) + funcwrappers = [] + funcwrappers2 = [] # F90 codes + for n in m['interfaced']: + nb = None + for bi in m['body']: + if bi['block'] not in ['interface', 'abstract interface']: + errmess('buildmodule: Expected interface block. Skipping.\n') + continue + for b in bi['body']: + if b['name'] == n: + nb = b + break + + if not nb: + print( + 'buildmodule: Could not find the body of interfaced routine "%s". Skipping.\n' % (n), file=sys.stderr) + continue + nb_list = [nb] + if 'entry' in nb: + for k, a in nb['entry'].items(): + nb1 = copy.deepcopy(nb) + del nb1['entry'] + nb1['name'] = k + nb1['args'] = a + nb_list.append(nb1) + for nb in nb_list: + # requiresf90wrapper must be called before buildapi as it + # rewrites assumed shape arrays as automatic arrays. + isf90 = requiresf90wrapper(nb) + # options is in scope here + if options['emptygen']: + b_path = options['buildpath'] + m_name = vrd['modulename'] + outmess(' Generating possibly empty wrappers"\n') + Path(f"{b_path}/{vrd['coutput']}").touch() + if isf90: + # f77 + f90 wrappers + outmess(f' Maybe empty "{m_name}-f2pywrappers2.f90"\n') + Path(f'{b_path}/{m_name}-f2pywrappers2.f90').touch() + outmess(f' Maybe empty "{m_name}-f2pywrappers.f"\n') + Path(f'{b_path}/{m_name}-f2pywrappers.f').touch() + else: + # only f77 wrappers + outmess(f' Maybe empty "{m_name}-f2pywrappers.f"\n') + Path(f'{b_path}/{m_name}-f2pywrappers.f').touch() + api, wrap = buildapi(nb) + if wrap: + if isf90: + funcwrappers2.append(wrap) + else: + funcwrappers.append(wrap) + ar = applyrules(api, vrd) + rd = dictappend(rd, ar) + + # Construct COMMON block support + cr, wrap = common_rules.buildhooks(m) + if wrap: + funcwrappers.append(wrap) + ar = applyrules(cr, vrd) + rd = dictappend(rd, ar) + + # Construct F90 module support + mr, wrap = f90mod_rules.buildhooks(m) + if wrap: + funcwrappers2.append(wrap) + ar = applyrules(mr, vrd) + rd = dictappend(rd, ar) + + for u in um: + ar = use_rules.buildusevars(u, m['use'][u['name']]) + rd = dictappend(rd, ar) + + needs = cfuncs.get_needs() + # Add mapped definitions + needs['typedefs'] += [cvar for cvar in capi_maps.f2cmap_mapped # + if cvar in typedef_need_dict.values()] + code = {} + for n in needs.keys(): + code[n] = [] + for k in needs[n]: + c = '' + if k in cfuncs.includes0: + c = cfuncs.includes0[k] + elif k in cfuncs.includes: + c = cfuncs.includes[k] + elif k in cfuncs.userincludes: + c = cfuncs.userincludes[k] + elif k in cfuncs.typedefs: + c = cfuncs.typedefs[k] + elif k in cfuncs.typedefs_generated: + c = cfuncs.typedefs_generated[k] + elif k in cfuncs.cppmacros: + c = cfuncs.cppmacros[k] + elif k in cfuncs.cfuncs: + c = cfuncs.cfuncs[k] + elif k in cfuncs.callbacks: + c = cfuncs.callbacks[k] + elif k in cfuncs.f90modhooks: + c = cfuncs.f90modhooks[k] + elif k in cfuncs.commonhooks: + c = cfuncs.commonhooks[k] + else: + errmess('buildmodule: unknown need %s.\n' % (repr(k))) + continue + code[n].append(c) + mod_rules.append(code) + for r in mod_rules: + if ('_check' in r and r['_check'](m)) or ('_check' not in r): + ar = applyrules(r, vrd, m) + rd = dictappend(rd, ar) + ar = applyrules(module_rules, rd) + + fn = os.path.join(options['buildpath'], vrd['coutput']) + ret['csrc'] = fn + with open(fn, 'w') as f: + f.write(ar['modulebody'].replace('\t', 2 * ' ')) + outmess(' Wrote C/API module "%s" to file "%s"\n' % (m['name'], fn)) + + if options['dorestdoc']: + fn = os.path.join( + options['buildpath'], vrd['modulename'] + 'module.rest') + with open(fn, 'w') as f: + f.write('.. -*- rest -*-\n') + f.write('\n'.join(ar['restdoc'])) + outmess(' ReST Documentation is saved to file "%s/%smodule.rest"\n' % + (options['buildpath'], vrd['modulename'])) + if options['dolatexdoc']: + fn = os.path.join( + options['buildpath'], vrd['modulename'] + 'module.tex') + ret['ltx'] = fn + with open(fn, 'w') as f: + f.write( + '%% This file is auto-generated with f2py (version:%s)\n' % (f2py_version)) + if 'shortlatex' not in options: + f.write( + '\\documentclass{article}\n\\usepackage{a4wide}\n\\begin{document}\n\\tableofcontents\n\n') + f.write('\n'.join(ar['latexdoc'])) + if 'shortlatex' not in options: + f.write('\\end{document}') + outmess(' Documentation is saved to file "%s/%smodule.tex"\n' % + (options['buildpath'], vrd['modulename'])) + if funcwrappers: + wn = os.path.join(options['buildpath'], vrd['f2py_wrapper_output']) + ret['fsrc'] = wn + with open(wn, 'w') as f: + f.write('C -*- fortran -*-\n') + f.write( + 'C This file is autogenerated with f2py (version:%s)\n' % (f2py_version)) + f.write( + 'C It contains Fortran 77 wrappers to fortran functions.\n') + lines = [] + for l in ('\n\n'.join(funcwrappers) + '\n').split('\n'): + if 0 <= l.find('!') < 66: + # don't split comment lines + lines.append(l + '\n') + elif l and l[0] == ' ': + while len(l) >= 66: + lines.append(l[:66] + '\n &') + l = l[66:] + lines.append(l + '\n') + else: + lines.append(l + '\n') + lines = ''.join(lines).replace('\n &\n', '\n') + f.write(lines) + outmess(' Fortran 77 wrappers are saved to "%s"\n' % (wn)) + if funcwrappers2: + wn = os.path.join( + options['buildpath'], '%s-f2pywrappers2.f90' % (vrd['modulename'])) + ret['fsrc'] = wn + with open(wn, 'w') as f: + f.write('! -*- f90 -*-\n') + f.write( + '! This file is autogenerated with f2py (version:%s)\n' % (f2py_version)) + f.write( + '! It contains Fortran 90 wrappers to fortran functions.\n') + lines = [] + for l in ('\n\n'.join(funcwrappers2) + '\n').split('\n'): + if 0 <= l.find('!') < 72: + # don't split comment lines + lines.append(l + '\n') + elif len(l) > 72 and l[0] == ' ': + lines.append(l[:72] + '&\n &') + l = l[72:] + while len(l) > 66: + lines.append(l[:66] + '&\n &') + l = l[66:] + lines.append(l + '\n') + else: + lines.append(l + '\n') + lines = ''.join(lines).replace('\n &\n', '\n') + f.write(lines) + outmess(' Fortran 90 wrappers are saved to "%s"\n' % (wn)) + return ret + +################## Build C/API function ############# + +stnd = {1: 'st', 2: 'nd', 3: 'rd', 4: 'th', 5: 'th', + 6: 'th', 7: 'th', 8: 'th', 9: 'th', 0: 'th'} + + +def buildapi(rout): + rout, wrap = func2subr.assubr(rout) + args, depargs = getargs2(rout) + capi_maps.depargs = depargs + var = rout['vars'] + + if ismoduleroutine(rout): + outmess(' Constructing wrapper function "%s.%s"...\n' % + (rout['modulename'], rout['name'])) + else: + outmess(' Constructing wrapper function "%s"...\n' % (rout['name'])) + # Routine + vrd = capi_maps.routsign2map(rout) + rd = dictappend({}, vrd) + for r in rout_rules: + if ('_check' in r and r['_check'](rout)) or ('_check' not in r): + ar = applyrules(r, vrd, rout) + rd = dictappend(rd, ar) + + # Args + nth, nthk = 0, 0 + savevrd = {} + for a in args: + vrd = capi_maps.sign2map(a, var[a]) + if isintent_aux(var[a]): + _rules = aux_rules + else: + _rules = arg_rules + if not isintent_hide(var[a]): + if not isoptional(var[a]): + nth = nth + 1 + vrd['nth'] = repr(nth) + stnd[nth % 10] + ' argument' + else: + nthk = nthk + 1 + vrd['nth'] = repr(nthk) + stnd[nthk % 10] + ' keyword' + else: + vrd['nth'] = 'hidden' + savevrd[a] = vrd + for r in _rules: + if '_depend' in r: + continue + if ('_check' in r and r['_check'](var[a])) or ('_check' not in r): + ar = applyrules(r, vrd, var[a]) + rd = dictappend(rd, ar) + if '_break' in r: + break + for a in depargs: + if isintent_aux(var[a]): + _rules = aux_rules + else: + _rules = arg_rules + vrd = savevrd[a] + for r in _rules: + if '_depend' not in r: + continue + if ('_check' in r and r['_check'](var[a])) or ('_check' not in r): + ar = applyrules(r, vrd, var[a]) + rd = dictappend(rd, ar) + if '_break' in r: + break + if 'check' in var[a]: + for c in var[a]['check']: + vrd['check'] = c + ar = applyrules(check_rules, vrd, var[a]) + rd = dictappend(rd, ar) + if isinstance(rd['cleanupfrompyobj'], list): + rd['cleanupfrompyobj'].reverse() + if isinstance(rd['closepyobjfrom'], list): + rd['closepyobjfrom'].reverse() + rd['docsignature'] = stripcomma(replace('#docsign##docsignopt##docsignxa#', + {'docsign': rd['docsign'], + 'docsignopt': rd['docsignopt'], + 'docsignxa': rd['docsignxa']})) + optargs = stripcomma(replace('#docsignopt##docsignxa#', + {'docsignxa': rd['docsignxashort'], + 'docsignopt': rd['docsignoptshort']} + )) + if optargs == '': + rd['docsignatureshort'] = stripcomma( + replace('#docsign#', {'docsign': rd['docsign']})) + else: + rd['docsignatureshort'] = replace('#docsign#[#docsignopt#]', + {'docsign': rd['docsign'], + 'docsignopt': optargs, + }) + rd['latexdocsignatureshort'] = rd['docsignatureshort'].replace('_', '\\_') + rd['latexdocsignatureshort'] = rd[ + 'latexdocsignatureshort'].replace(',', ', ') + cfs = stripcomma(replace('#callfortran##callfortranappend#', { + 'callfortran': rd['callfortran'], 'callfortranappend': rd['callfortranappend']})) + if len(rd['callfortranappend']) > 1: + rd['callcompaqfortran'] = stripcomma(replace('#callfortran# 0,#callfortranappend#', { + 'callfortran': rd['callfortran'], 'callfortranappend': rd['callfortranappend']})) + else: + rd['callcompaqfortran'] = cfs + rd['callfortran'] = cfs + if isinstance(rd['docreturn'], list): + rd['docreturn'] = stripcomma( + replace('#docreturn#', {'docreturn': rd['docreturn']})) + ' = ' + rd['docstrsigns'] = [] + rd['latexdocstrsigns'] = [] + for k in ['docstrreq', 'docstropt', 'docstrout', 'docstrcbs']: + if k in rd and isinstance(rd[k], list): + rd['docstrsigns'] = rd['docstrsigns'] + rd[k] + k = 'latex' + k + if k in rd and isinstance(rd[k], list): + rd['latexdocstrsigns'] = rd['latexdocstrsigns'] + rd[k][0:1] +\ + ['\\begin{description}'] + rd[k][1:] +\ + ['\\end{description}'] + + ar = applyrules(routine_rules, rd) + if ismoduleroutine(rout): + outmess(' %s\n' % (ar['docshort'])) + else: + outmess(' %s\n' % (ar['docshort'])) + return ar, wrap + + +#################### EOF rules.py ####################### diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/setup.cfg b/venv/lib/python3.12/site-packages/numpy/f2py/setup.cfg new file mode 100644 index 0000000000000000000000000000000000000000..14669544cc9ec345373bf5f719e321348fc96a40 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/setup.cfg @@ -0,0 +1,3 @@ +[bdist_rpm] +doc_files = docs/ + tests/ \ No newline at end of file diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/src/fortranobject.c b/venv/lib/python3.12/site-packages/numpy/f2py/src/fortranobject.c new file mode 100644 index 0000000000000000000000000000000000000000..3594147281a28f8940a01cbbab63a7b03bc1d9ef --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/src/fortranobject.c @@ -0,0 +1,1423 @@ +#define FORTRANOBJECT_C +#include "fortranobject.h" + +#ifdef __cplusplus +extern "C" { +#endif + +#include +#include +#include + +/* + This file implements: FortranObject, array_from_pyobj, copy_ND_array + + Author: Pearu Peterson + $Revision: 1.52 $ + $Date: 2005/07/11 07:44:20 $ +*/ + +int +F2PyDict_SetItemString(PyObject *dict, char *name, PyObject *obj) +{ + if (obj == NULL) { + fprintf(stderr, "Error loading %s\n", name); + if (PyErr_Occurred()) { + PyErr_Print(); + PyErr_Clear(); + } + return -1; + } + return PyDict_SetItemString(dict, name, obj); +} + +/* + * Python-only fallback for thread-local callback pointers + */ +void * +F2PySwapThreadLocalCallbackPtr(char *key, void *ptr) +{ + PyObject *local_dict, *value; + void *prev; + + local_dict = PyThreadState_GetDict(); + if (local_dict == NULL) { + Py_FatalError( + "F2PySwapThreadLocalCallbackPtr: PyThreadState_GetDict " + "failed"); + } + + value = PyDict_GetItemString(local_dict, key); + if (value != NULL) { + prev = PyLong_AsVoidPtr(value); + if (PyErr_Occurred()) { + Py_FatalError( + "F2PySwapThreadLocalCallbackPtr: PyLong_AsVoidPtr failed"); + } + } + else { + prev = NULL; + } + + value = PyLong_FromVoidPtr((void *)ptr); + if (value == NULL) { + Py_FatalError( + "F2PySwapThreadLocalCallbackPtr: PyLong_FromVoidPtr failed"); + } + + if (PyDict_SetItemString(local_dict, key, value) != 0) { + Py_FatalError( + "F2PySwapThreadLocalCallbackPtr: PyDict_SetItemString failed"); + } + + Py_DECREF(value); + + return prev; +} + +void * +F2PyGetThreadLocalCallbackPtr(char *key) +{ + PyObject *local_dict, *value; + void *prev; + + local_dict = PyThreadState_GetDict(); + if (local_dict == NULL) { + Py_FatalError( + "F2PyGetThreadLocalCallbackPtr: PyThreadState_GetDict failed"); + } + + value = PyDict_GetItemString(local_dict, key); + if (value != NULL) { + prev = PyLong_AsVoidPtr(value); + if (PyErr_Occurred()) { + Py_FatalError( + "F2PyGetThreadLocalCallbackPtr: PyLong_AsVoidPtr failed"); + } + } + else { + prev = NULL; + } + + return prev; +} + +static PyArray_Descr * +get_descr_from_type_and_elsize(const int type_num, const int elsize) { + PyArray_Descr * descr = PyArray_DescrFromType(type_num); + if (type_num == NPY_STRING) { + // PyArray_DescrFromType returns descr with elsize = 0. + PyArray_DESCR_REPLACE(descr); + if (descr == NULL) { + return NULL; + } + PyDataType_SET_ELSIZE(descr, elsize); + } + return descr; +} + +/************************* FortranObject *******************************/ + +typedef PyObject *(*fortranfunc)(PyObject *, PyObject *, PyObject *, void *); + +PyObject * +PyFortranObject_New(FortranDataDef *defs, f2py_void_func init) +{ + int i; + PyFortranObject *fp = NULL; + PyObject *v = NULL; + if (init != NULL) { /* Initialize F90 module objects */ + (*(init))(); + } + fp = PyObject_New(PyFortranObject, &PyFortran_Type); + if (fp == NULL) { + return NULL; + } + if ((fp->dict = PyDict_New()) == NULL) { + Py_DECREF(fp); + return NULL; + } + fp->len = 0; + while (defs[fp->len].name != NULL) { + fp->len++; + } + if (fp->len == 0) { + goto fail; + } + fp->defs = defs; + for (i = 0; i < fp->len; i++) { + if (fp->defs[i].rank == -1) { /* Is Fortran routine */ + v = PyFortranObject_NewAsAttr(&(fp->defs[i])); + if (v == NULL) { + goto fail; + } + PyDict_SetItemString(fp->dict, fp->defs[i].name, v); + Py_XDECREF(v); + } + else if ((fp->defs[i].data) != + NULL) { /* Is Fortran variable or array (not allocatable) */ + PyArray_Descr * + descr = get_descr_from_type_and_elsize(fp->defs[i].type, + fp->defs[i].elsize); + if (descr == NULL) { + goto fail; + } + v = PyArray_NewFromDescr(&PyArray_Type, descr, fp->defs[i].rank, + fp->defs[i].dims.d, NULL, fp->defs[i].data, + NPY_ARRAY_FARRAY, NULL); + if (v == NULL) { + Py_DECREF(descr); + goto fail; + } + PyDict_SetItemString(fp->dict, fp->defs[i].name, v); + Py_XDECREF(v); + } + } + return (PyObject *)fp; +fail: + Py_XDECREF(fp); + return NULL; +} + +PyObject * +PyFortranObject_NewAsAttr(FortranDataDef *defs) +{ /* used for calling F90 module routines */ + PyFortranObject *fp = NULL; + fp = PyObject_New(PyFortranObject, &PyFortran_Type); + if (fp == NULL) + return NULL; + if ((fp->dict = PyDict_New()) == NULL) { + PyObject_Del(fp); + return NULL; + } + fp->len = 1; + fp->defs = defs; + if (defs->rank == -1) { + PyDict_SetItemString(fp->dict, "__name__", PyUnicode_FromFormat("function %s", defs->name)); + } else if (defs->rank == 0) { + PyDict_SetItemString(fp->dict, "__name__", PyUnicode_FromFormat("scalar %s", defs->name)); + } else { + PyDict_SetItemString(fp->dict, "__name__", PyUnicode_FromFormat("array %s", defs->name)); + } + return (PyObject *)fp; +} + +/* Fortran methods */ + +static void +fortran_dealloc(PyFortranObject *fp) +{ + Py_XDECREF(fp->dict); + PyObject_Del(fp); +} + +/* Returns number of bytes consumed from buf, or -1 on error. */ +static Py_ssize_t +format_def(char *buf, Py_ssize_t size, FortranDataDef def) +{ + char *p = buf; + int i; + npy_intp n; + + n = PyOS_snprintf(p, size, "array(%" NPY_INTP_FMT, def.dims.d[0]); + if (n < 0 || n >= size) { + return -1; + } + p += n; + size -= n; + + for (i = 1; i < def.rank; i++) { + n = PyOS_snprintf(p, size, ",%" NPY_INTP_FMT, def.dims.d[i]); + if (n < 0 || n >= size) { + return -1; + } + p += n; + size -= n; + } + + if (size <= 0) { + return -1; + } + + *p++ = ')'; + size--; + + if (def.data == NULL) { + static const char notalloc[] = ", not allocated"; + if ((size_t)size < sizeof(notalloc)) { + return -1; + } + memcpy(p, notalloc, sizeof(notalloc)); + p += sizeof(notalloc); + size -= sizeof(notalloc); + } + + return p - buf; +} + +static PyObject * +fortran_doc(FortranDataDef def) +{ + char *buf, *p; + PyObject *s = NULL; + Py_ssize_t n, origsize, size = 100; + + if (def.doc != NULL) { + size += strlen(def.doc); + } + origsize = size; + buf = p = (char *)PyMem_Malloc(size); + if (buf == NULL) { + return PyErr_NoMemory(); + } + + if (def.rank == -1) { + if (def.doc) { + n = strlen(def.doc); + if (n > size) { + goto fail; + } + memcpy(p, def.doc, n); + p += n; + size -= n; + } + else { + n = PyOS_snprintf(p, size, "%s - no docs available", def.name); + if (n < 0 || n >= size) { + goto fail; + } + p += n; + size -= n; + } + } + else { + PyArray_Descr *d = PyArray_DescrFromType(def.type); + n = PyOS_snprintf(p, size, "%s : '%c'-", def.name, d->type); + Py_DECREF(d); + if (n < 0 || n >= size) { + goto fail; + } + p += n; + size -= n; + + if (def.data == NULL) { + n = format_def(p, size, def); + if (n < 0) { + goto fail; + } + p += n; + size -= n; + } + else if (def.rank > 0) { + n = format_def(p, size, def); + if (n < 0) { + goto fail; + } + p += n; + size -= n; + } + else { + n = strlen("scalar"); + if (size < n) { + goto fail; + } + memcpy(p, "scalar", n); + p += n; + size -= n; + } + } + if (size <= 1) { + goto fail; + } + *p++ = '\n'; + size--; + + /* p now points one beyond the last character of the string in buf */ + s = PyUnicode_FromStringAndSize(buf, p - buf); + + PyMem_Free(buf); + return s; + +fail: + fprintf(stderr, + "fortranobject.c: fortran_doc: len(p)=%zd>%zd=size:" + " too long docstring required, increase size\n", + p - buf, origsize); + PyMem_Free(buf); + return NULL; +} + +static FortranDataDef *save_def; /* save pointer of an allocatable array */ +static void +set_data(char *d, npy_intp *f) +{ /* callback from Fortran */ + if (*f) /* In fortran f=allocated(d) */ + save_def->data = d; + else + save_def->data = NULL; + /* printf("set_data: d=%p,f=%d\n",d,*f); */ +} + +static PyObject * +fortran_getattr(PyFortranObject *fp, char *name) +{ + int i, j, k, flag; + if (fp->dict != NULL) { + PyObject *v = _PyDict_GetItemStringWithError(fp->dict, name); + if (v == NULL && PyErr_Occurred()) { + return NULL; + } + else if (v != NULL) { + Py_INCREF(v); + return v; + } + } + for (i = 0, j = 1; i < fp->len && (j = strcmp(name, fp->defs[i].name)); + i++) + ; + if (j == 0) + if (fp->defs[i].rank != -1) { /* F90 allocatable array */ + if (fp->defs[i].func == NULL) + return NULL; + for (k = 0; k < fp->defs[i].rank; ++k) fp->defs[i].dims.d[k] = -1; + save_def = &fp->defs[i]; + (*(fp->defs[i].func))(&fp->defs[i].rank, fp->defs[i].dims.d, + set_data, &flag); + if (flag == 2) + k = fp->defs[i].rank + 1; + else + k = fp->defs[i].rank; + if (fp->defs[i].data != NULL) { /* array is allocated */ + PyObject *v = PyArray_New( + &PyArray_Type, k, fp->defs[i].dims.d, fp->defs[i].type, + NULL, fp->defs[i].data, 0, NPY_ARRAY_FARRAY, NULL); + if (v == NULL) + return NULL; + /* Py_INCREF(v); */ + return v; + } + else { /* array is not allocated */ + Py_RETURN_NONE; + } + } + if (strcmp(name, "__dict__") == 0) { + Py_INCREF(fp->dict); + return fp->dict; + } + if (strcmp(name, "__doc__") == 0) { + PyObject *s = PyUnicode_FromString(""), *s2, *s3; + for (i = 0; i < fp->len; i++) { + s2 = fortran_doc(fp->defs[i]); + s3 = PyUnicode_Concat(s, s2); + Py_DECREF(s2); + Py_DECREF(s); + s = s3; + } + if (PyDict_SetItemString(fp->dict, name, s)) + return NULL; + return s; + } + if ((strcmp(name, "_cpointer") == 0) && (fp->len == 1)) { + PyObject *cobj = + F2PyCapsule_FromVoidPtr((void *)(fp->defs[0].data), NULL); + if (PyDict_SetItemString(fp->dict, name, cobj)) + return NULL; + return cobj; + } + PyObject *str, *ret; + str = PyUnicode_FromString(name); + ret = PyObject_GenericGetAttr((PyObject *)fp, str); + Py_DECREF(str); + return ret; +} + +static int +fortran_setattr(PyFortranObject *fp, char *name, PyObject *v) +{ + int i, j, flag; + PyArrayObject *arr = NULL; + for (i = 0, j = 1; i < fp->len && (j = strcmp(name, fp->defs[i].name)); + i++) + ; + if (j == 0) { + if (fp->defs[i].rank == -1) { + PyErr_SetString(PyExc_AttributeError, + "over-writing fortran routine"); + return -1; + } + if (fp->defs[i].func != NULL) { /* is allocatable array */ + npy_intp dims[F2PY_MAX_DIMS]; + int k; + save_def = &fp->defs[i]; + if (v != Py_None) { /* set new value (reallocate if needed -- + see f2py generated code for more + details ) */ + for (k = 0; k < fp->defs[i].rank; k++) dims[k] = -1; + if ((arr = array_from_pyobj(fp->defs[i].type, dims, + fp->defs[i].rank, F2PY_INTENT_IN, + v)) == NULL) + return -1; + (*(fp->defs[i].func))(&fp->defs[i].rank, PyArray_DIMS(arr), + set_data, &flag); + } + else { /* deallocate */ + for (k = 0; k < fp->defs[i].rank; k++) dims[k] = 0; + (*(fp->defs[i].func))(&fp->defs[i].rank, dims, set_data, + &flag); + for (k = 0; k < fp->defs[i].rank; k++) dims[k] = -1; + } + memcpy(fp->defs[i].dims.d, dims, + fp->defs[i].rank * sizeof(npy_intp)); + } + else { /* not allocatable array */ + if ((arr = array_from_pyobj(fp->defs[i].type, fp->defs[i].dims.d, + fp->defs[i].rank, F2PY_INTENT_IN, + v)) == NULL) + return -1; + } + if (fp->defs[i].data != + NULL) { /* copy Python object to Fortran array */ + npy_intp s = PyArray_MultiplyList(fp->defs[i].dims.d, + PyArray_NDIM(arr)); + if (s == -1) + s = PyArray_MultiplyList(PyArray_DIMS(arr), PyArray_NDIM(arr)); + if (s < 0 || (memcpy(fp->defs[i].data, PyArray_DATA(arr), + s * PyArray_ITEMSIZE(arr))) == NULL) { + if ((PyObject *)arr != v) { + Py_DECREF(arr); + } + return -1; + } + if ((PyObject *)arr != v) { + Py_DECREF(arr); + } + } + else + return (fp->defs[i].func == NULL ? -1 : 0); + return 0; /* successful */ + } + if (fp->dict == NULL) { + fp->dict = PyDict_New(); + if (fp->dict == NULL) + return -1; + } + if (v == NULL) { + int rv = PyDict_DelItemString(fp->dict, name); + if (rv < 0) + PyErr_SetString(PyExc_AttributeError, + "delete non-existing fortran attribute"); + return rv; + } + else + return PyDict_SetItemString(fp->dict, name, v); +} + +static PyObject * +fortran_call(PyFortranObject *fp, PyObject *arg, PyObject *kw) +{ + int i = 0; + /* printf("fortran call + name=%s,func=%p,data=%p,%p\n",fp->defs[i].name, + fp->defs[i].func,fp->defs[i].data,&fp->defs[i].data); */ + if (fp->defs[i].rank == -1) { /* is Fortran routine */ + if (fp->defs[i].func == NULL) { + PyErr_Format(PyExc_RuntimeError, "no function to call"); + return NULL; + } + else if (fp->defs[i].data == NULL) + /* dummy routine */ + return (*((fortranfunc)(fp->defs[i].func)))((PyObject *)fp, arg, + kw, NULL); + else + return (*((fortranfunc)(fp->defs[i].func)))( + (PyObject *)fp, arg, kw, (void *)fp->defs[i].data); + } + PyErr_Format(PyExc_TypeError, "this fortran object is not callable"); + return NULL; +} + +static PyObject * +fortran_repr(PyFortranObject *fp) +{ + PyObject *name = NULL, *repr = NULL; + name = PyObject_GetAttrString((PyObject *)fp, "__name__"); + PyErr_Clear(); + if (name != NULL && PyUnicode_Check(name)) { + repr = PyUnicode_FromFormat("", name); + } + else { + repr = PyUnicode_FromString(""); + } + Py_XDECREF(name); + return repr; +} + +PyTypeObject PyFortran_Type = { + PyVarObject_HEAD_INIT(NULL, 0).tp_name = "fortran", + .tp_basicsize = sizeof(PyFortranObject), + .tp_dealloc = (destructor)fortran_dealloc, + .tp_getattr = (getattrfunc)fortran_getattr, + .tp_setattr = (setattrfunc)fortran_setattr, + .tp_repr = (reprfunc)fortran_repr, + .tp_call = (ternaryfunc)fortran_call, +}; + +/************************* f2py_report_atexit *******************************/ + +#ifdef F2PY_REPORT_ATEXIT +static int passed_time = 0; +static int passed_counter = 0; +static int passed_call_time = 0; +static struct timeb start_time; +static struct timeb stop_time; +static struct timeb start_call_time; +static struct timeb stop_call_time; +static int cb_passed_time = 0; +static int cb_passed_counter = 0; +static int cb_passed_call_time = 0; +static struct timeb cb_start_time; +static struct timeb cb_stop_time; +static struct timeb cb_start_call_time; +static struct timeb cb_stop_call_time; + +extern void +f2py_start_clock(void) +{ + ftime(&start_time); +} +extern void +f2py_start_call_clock(void) +{ + f2py_stop_clock(); + ftime(&start_call_time); +} +extern void +f2py_stop_clock(void) +{ + ftime(&stop_time); + passed_time += 1000 * (stop_time.time - start_time.time); + passed_time += stop_time.millitm - start_time.millitm; +} +extern void +f2py_stop_call_clock(void) +{ + ftime(&stop_call_time); + passed_call_time += 1000 * (stop_call_time.time - start_call_time.time); + passed_call_time += stop_call_time.millitm - start_call_time.millitm; + passed_counter += 1; + f2py_start_clock(); +} + +extern void +f2py_cb_start_clock(void) +{ + ftime(&cb_start_time); +} +extern void +f2py_cb_start_call_clock(void) +{ + f2py_cb_stop_clock(); + ftime(&cb_start_call_time); +} +extern void +f2py_cb_stop_clock(void) +{ + ftime(&cb_stop_time); + cb_passed_time += 1000 * (cb_stop_time.time - cb_start_time.time); + cb_passed_time += cb_stop_time.millitm - cb_start_time.millitm; +} +extern void +f2py_cb_stop_call_clock(void) +{ + ftime(&cb_stop_call_time); + cb_passed_call_time += + 1000 * (cb_stop_call_time.time - cb_start_call_time.time); + cb_passed_call_time += + cb_stop_call_time.millitm - cb_start_call_time.millitm; + cb_passed_counter += 1; + f2py_cb_start_clock(); +} + +static int f2py_report_on_exit_been_here = 0; +extern void +f2py_report_on_exit(int exit_flag, void *name) +{ + if (f2py_report_on_exit_been_here) { + fprintf(stderr, " %s\n", (char *)name); + return; + } + f2py_report_on_exit_been_here = 1; + fprintf(stderr, " /-----------------------\\\n"); + fprintf(stderr, " < F2PY performance report >\n"); + fprintf(stderr, " \\-----------------------/\n"); + fprintf(stderr, "Overall time spent in ...\n"); + fprintf(stderr, "(a) wrapped (Fortran/C) functions : %8d msec\n", + passed_call_time); + fprintf(stderr, "(b) f2py interface, %6d calls : %8d msec\n", + passed_counter, passed_time); + fprintf(stderr, "(c) call-back (Python) functions : %8d msec\n", + cb_passed_call_time); + fprintf(stderr, "(d) f2py call-back interface, %6d calls : %8d msec\n", + cb_passed_counter, cb_passed_time); + + fprintf(stderr, + "(e) wrapped (Fortran/C) functions (actual) : %8d msec\n\n", + passed_call_time - cb_passed_call_time - cb_passed_time); + fprintf(stderr, + "Use -DF2PY_REPORT_ATEXIT_DISABLE to disable this message.\n"); + fprintf(stderr, "Exit status: %d\n", exit_flag); + fprintf(stderr, "Modules : %s\n", (char *)name); +} +#endif + +/********************** report on array copy ****************************/ + +#ifdef F2PY_REPORT_ON_ARRAY_COPY +static void +f2py_report_on_array_copy(PyArrayObject *arr) +{ + const npy_intp arr_size = PyArray_Size((PyObject *)arr); + if (arr_size > F2PY_REPORT_ON_ARRAY_COPY) { + fprintf(stderr, + "copied an array: size=%ld, elsize=%" NPY_INTP_FMT "\n", + arr_size, (npy_intp)PyArray_ITEMSIZE(arr)); + } +} +static void +f2py_report_on_array_copy_fromany(void) +{ + fprintf(stderr, "created an array from object\n"); +} + +#define F2PY_REPORT_ON_ARRAY_COPY_FROMARR \ + f2py_report_on_array_copy((PyArrayObject *)arr) +#define F2PY_REPORT_ON_ARRAY_COPY_FROMANY f2py_report_on_array_copy_fromany() +#else +#define F2PY_REPORT_ON_ARRAY_COPY_FROMARR +#define F2PY_REPORT_ON_ARRAY_COPY_FROMANY +#endif + +/************************* array_from_obj *******************************/ + +/* + * File: array_from_pyobj.c + * + * Description: + * ------------ + * Provides array_from_pyobj function that returns a contiguous array + * object with the given dimensions and required storage order, either + * in row-major (C) or column-major (Fortran) order. The function + * array_from_pyobj is very flexible about its Python object argument + * that can be any number, list, tuple, or array. + * + * array_from_pyobj is used in f2py generated Python extension + * modules. + * + * Author: Pearu Peterson + * Created: 13-16 January 2002 + * $Id: fortranobject.c,v 1.52 2005/07/11 07:44:20 pearu Exp $ + */ + +static int check_and_fix_dimensions(const PyArrayObject* arr, + const int rank, + npy_intp *dims, + const char *errmess); + +static int +find_first_negative_dimension(const int rank, const npy_intp *dims) +{ + int i; + for (i = 0; i < rank; ++i) { + if (dims[i] < 0) { + return i; + } + } + return -1; +} + +#ifdef DEBUG_COPY_ND_ARRAY +void +dump_dims(int rank, npy_intp const *dims) +{ + int i; + printf("["); + for (i = 0; i < rank; ++i) { + printf("%3" NPY_INTP_FMT, dims[i]); + } + printf("]\n"); +} +void +dump_attrs(const PyArrayObject *obj) +{ + const PyArrayObject_fields *arr = (const PyArrayObject_fields *)obj; + int rank = PyArray_NDIM(arr); + npy_intp size = PyArray_Size((PyObject *)arr); + printf("\trank = %d, flags = %d, size = %" NPY_INTP_FMT "\n", rank, + arr->flags, size); + printf("\tstrides = "); + dump_dims(rank, arr->strides); + printf("\tdimensions = "); + dump_dims(rank, arr->dimensions); +} +#endif + +#define SWAPTYPE(a, b, t) \ + { \ + t c; \ + c = (a); \ + (a) = (b); \ + (b) = c; \ + } + +static int +swap_arrays(PyArrayObject *obj1, PyArrayObject *obj2) +{ + PyArrayObject_fields *arr1 = (PyArrayObject_fields *)obj1, + *arr2 = (PyArrayObject_fields *)obj2; + SWAPTYPE(arr1->data, arr2->data, char *); + SWAPTYPE(arr1->nd, arr2->nd, int); + SWAPTYPE(arr1->dimensions, arr2->dimensions, npy_intp *); + SWAPTYPE(arr1->strides, arr2->strides, npy_intp *); + SWAPTYPE(arr1->base, arr2->base, PyObject *); + SWAPTYPE(arr1->descr, arr2->descr, PyArray_Descr *); + SWAPTYPE(arr1->flags, arr2->flags, int); + /* SWAPTYPE(arr1->weakreflist,arr2->weakreflist,PyObject*); */ + return 0; +} + +#define ARRAY_ISCOMPATIBLE(arr,type_num) \ + ((PyArray_ISINTEGER(arr) && PyTypeNum_ISINTEGER(type_num)) || \ + (PyArray_ISFLOAT(arr) && PyTypeNum_ISFLOAT(type_num)) || \ + (PyArray_ISCOMPLEX(arr) && PyTypeNum_ISCOMPLEX(type_num)) || \ + (PyArray_ISBOOL(arr) && PyTypeNum_ISBOOL(type_num)) || \ + (PyArray_ISSTRING(arr) && PyTypeNum_ISSTRING(type_num))) + +static int +get_elsize(PyObject *obj) { + /* + get_elsize determines array itemsize from a Python object. Returns + elsize if successful, -1 otherwise. + + Supported types of the input are: numpy.ndarray, bytes, str, tuple, + list. + */ + + if (PyArray_Check(obj)) { + return PyArray_ITEMSIZE((PyArrayObject *)obj); + } else if (PyBytes_Check(obj)) { + return PyBytes_GET_SIZE(obj); + } else if (PyUnicode_Check(obj)) { + return PyUnicode_GET_LENGTH(obj); + } else if (PySequence_Check(obj)) { + PyObject* fast = PySequence_Fast(obj, "f2py:fortranobject.c:get_elsize"); + if (fast != NULL) { + Py_ssize_t i, n = PySequence_Fast_GET_SIZE(fast); + int sz, elsize = 0; + for (i=0; i elsize) { + elsize = sz; + } + } + Py_DECREF(fast); + return elsize; + } + } + return -1; +} + +extern PyArrayObject * +ndarray_from_pyobj(const int type_num, + const int elsize_, + npy_intp *dims, + const int rank, + const int intent, + PyObject *obj, + const char *errmess) { + /* + * Return an array with given element type and shape from a Python + * object while taking into account the usage intent of the array. + * + * - element type is defined by type_num and elsize + * - shape is defined by dims and rank + * + * ndarray_from_pyobj is used to convert Python object arguments + * to numpy ndarrays with given type and shape that data is passed + * to interfaced Fortran or C functions. + * + * errmess (if not NULL), contains a prefix of an error message + * for an exception to be triggered within this function. + * + * Negative elsize value means that elsize is to be determined + * from the Python object in runtime. + * + * Note on strings + * --------------- + * + * String type (type_num == NPY_STRING) does not have fixed + * element size and, by default, the type object sets it to + * 0. Therefore, for string types, one has to use elsize + * argument. For other types, elsize value is ignored. + * + * NumPy defines the type of a fixed-width string as + * dtype('S'). In addition, there is also dtype('c'), that + * appears as dtype('S1') (these have the same type_num value), + * but is actually different (.char attribute is either 'S' or + * 'c', respecitely). + * + * In Fortran, character arrays and strings are different + * concepts. The relation between Fortran types, NumPy dtypes, + * and type_num-elsize pairs, is defined as follows: + * + * character*5 foo | dtype('S5') | elsize=5, shape=() + * character(5) foo | dtype('S1') | elsize=1, shape=(5) + * character*5 foo(n) | dtype('S5') | elsize=5, shape=(n,) + * character(5) foo(n) | dtype('S1') | elsize=1, shape=(5, n) + * character*(*) foo | dtype('S') | elsize=-1, shape=() + * + * Note about reference counting + * ----------------------------- + * + * If the caller returns the array to Python, it must be done with + * Py_BuildValue("N",arr). Otherwise, if obj!=arr then the caller + * must call Py_DECREF(arr). + * + * Note on intent(cache,out,..) + * ---------------------------- + * Don't expect correct data when returning intent(cache) array. + * + */ + char mess[F2PY_MESSAGE_BUFFER_SIZE]; + PyArrayObject *arr = NULL; + int elsize = (elsize_ < 0 ? get_elsize(obj) : elsize_); + if (elsize < 0) { + if (errmess != NULL) { + strcpy(mess, errmess); + } + sprintf(mess + strlen(mess), + " -- failed to determine element size from %s", + Py_TYPE(obj)->tp_name); + PyErr_SetString(PyExc_SystemError, mess); + return NULL; + } + PyArray_Descr * descr = get_descr_from_type_and_elsize(type_num, elsize); // new reference + if (descr == NULL) { + return NULL; + } + elsize = PyDataType_ELSIZE(descr); + if ((intent & F2PY_INTENT_HIDE) + || ((intent & F2PY_INTENT_CACHE) && (obj == Py_None)) + || ((intent & F2PY_OPTIONAL) && (obj == Py_None)) + ) { + /* intent(cache), optional, intent(hide) */ + int ineg = find_first_negative_dimension(rank, dims); + if (ineg >= 0) { + int i; + strcpy(mess, "failed to create intent(cache|hide)|optional array" + "-- must have defined dimensions but got ("); + for(i = 0; i < rank; ++i) + sprintf(mess + strlen(mess), "%" NPY_INTP_FMT ",", dims[i]); + strcat(mess, ")"); + PyErr_SetString(PyExc_ValueError, mess); + Py_DECREF(descr); + return NULL; + } + arr = (PyArrayObject *) \ + PyArray_NewFromDescr(&PyArray_Type, descr, rank, dims, + NULL, NULL, !(intent & F2PY_INTENT_C), NULL); + if (arr == NULL) { + Py_DECREF(descr); + return NULL; + } + if (PyArray_ITEMSIZE(arr) != elsize) { + strcpy(mess, "failed to create intent(cache|hide)|optional array"); + sprintf(mess+strlen(mess)," -- expected elsize=%d got %" NPY_INTP_FMT, elsize, (npy_intp)PyArray_ITEMSIZE(arr)); + PyErr_SetString(PyExc_ValueError,mess); + Py_DECREF(arr); + return NULL; + } + if (!(intent & F2PY_INTENT_CACHE)) { + PyArray_FILLWBYTE(arr, 0); + } + return arr; + } + + if (PyArray_Check(obj)) { + arr = (PyArrayObject *)obj; + if (intent & F2PY_INTENT_CACHE) { + /* intent(cache) */ + if (PyArray_ISONESEGMENT(arr) + && PyArray_ITEMSIZE(arr) >= elsize) { + if (check_and_fix_dimensions(arr, rank, dims, errmess)) { + Py_DECREF(descr); + return NULL; + } + if (intent & F2PY_INTENT_OUT) + Py_INCREF(arr); + Py_DECREF(descr); + return arr; + } + strcpy(mess, "failed to initialize intent(cache) array"); + if (!PyArray_ISONESEGMENT(arr)) + strcat(mess, " -- input must be in one segment"); + if (PyArray_ITEMSIZE(arr) < elsize) + sprintf(mess + strlen(mess), + " -- expected at least elsize=%d but got " + "%" NPY_INTP_FMT, + elsize, (npy_intp)PyArray_ITEMSIZE(arr)); + PyErr_SetString(PyExc_ValueError, mess); + Py_DECREF(descr); + return NULL; + } + + /* here we have always intent(in) or intent(inout) or intent(inplace) + */ + + if (check_and_fix_dimensions(arr, rank, dims, errmess)) { + Py_DECREF(descr); + return NULL; + } + /* + printf("intent alignment=%d\n", F2PY_GET_ALIGNMENT(intent)); + printf("alignment check=%d\n", F2PY_CHECK_ALIGNMENT(arr, intent)); + int i; + for (i=1;i<=16;i++) + printf("i=%d isaligned=%d\n", i, ARRAY_ISALIGNED(arr, i)); + */ + if ((! (intent & F2PY_INTENT_COPY)) && + PyArray_ITEMSIZE(arr) == elsize && + ARRAY_ISCOMPATIBLE(arr,type_num) && + F2PY_CHECK_ALIGNMENT(arr, intent)) { + if ((intent & F2PY_INTENT_INOUT || intent & F2PY_INTENT_INPLACE) + ? ((intent & F2PY_INTENT_C) ? PyArray_ISCARRAY(arr) : PyArray_ISFARRAY(arr)) + : ((intent & F2PY_INTENT_C) ? PyArray_ISCARRAY_RO(arr) : PyArray_ISFARRAY_RO(arr))) { + if ((intent & F2PY_INTENT_OUT)) { + Py_INCREF(arr); + } + /* Returning input array */ + Py_DECREF(descr); + return arr; + } + } + if (intent & F2PY_INTENT_INOUT) { + strcpy(mess, "failed to initialize intent(inout) array"); + /* Must use PyArray_IS*ARRAY because intent(inout) requires + * writable input */ + if ((intent & F2PY_INTENT_C) && !PyArray_ISCARRAY(arr)) + strcat(mess, " -- input not contiguous"); + if (!(intent & F2PY_INTENT_C) && !PyArray_ISFARRAY(arr)) + strcat(mess, " -- input not fortran contiguous"); + if (PyArray_ITEMSIZE(arr) != elsize) + sprintf(mess + strlen(mess), + " -- expected elsize=%d but got %" NPY_INTP_FMT, + elsize, + (npy_intp)PyArray_ITEMSIZE(arr) + ); + if (!(ARRAY_ISCOMPATIBLE(arr, type_num))) { + sprintf(mess + strlen(mess), + " -- input '%c' not compatible to '%c'", + PyArray_DESCR(arr)->type, descr->type); + } + if (!(F2PY_CHECK_ALIGNMENT(arr, intent))) + sprintf(mess + strlen(mess), " -- input not %d-aligned", + F2PY_GET_ALIGNMENT(intent)); + PyErr_SetString(PyExc_ValueError, mess); + Py_DECREF(descr); + return NULL; + } + + /* here we have always intent(in) or intent(inplace) */ + + { + PyArrayObject * retarr = (PyArrayObject *) \ + PyArray_NewFromDescr(&PyArray_Type, descr, PyArray_NDIM(arr), PyArray_DIMS(arr), + NULL, NULL, !(intent & F2PY_INTENT_C), NULL); + if (retarr==NULL) { + Py_DECREF(descr); + return NULL; + } + F2PY_REPORT_ON_ARRAY_COPY_FROMARR; + if (PyArray_CopyInto(retarr, arr)) { + Py_DECREF(retarr); + return NULL; + } + if (intent & F2PY_INTENT_INPLACE) { + if (swap_arrays(arr,retarr)) { + Py_DECREF(retarr); + return NULL; /* XXX: set exception */ + } + Py_XDECREF(retarr); + if (intent & F2PY_INTENT_OUT) + Py_INCREF(arr); + } else { + arr = retarr; + } + } + return arr; + } + + if ((intent & F2PY_INTENT_INOUT) || (intent & F2PY_INTENT_INPLACE) || + (intent & F2PY_INTENT_CACHE)) { + PyErr_Format(PyExc_TypeError, + "failed to initialize intent(inout|inplace|cache) " + "array, input '%s' object is not an array", + Py_TYPE(obj)->tp_name); + Py_DECREF(descr); + return NULL; + } + + { + F2PY_REPORT_ON_ARRAY_COPY_FROMANY; + arr = (PyArrayObject *)PyArray_FromAny( + obj, descr, 0, 0, + ((intent & F2PY_INTENT_C) ? NPY_ARRAY_CARRAY + : NPY_ARRAY_FARRAY) | + NPY_ARRAY_FORCECAST, + NULL); + // Warning: in the case of NPY_STRING, PyArray_FromAny may + // reset descr->elsize, e.g. dtype('S0') becomes dtype('S1'). + if (arr == NULL) { + Py_DECREF(descr); + return NULL; + } + if (type_num != NPY_STRING && PyArray_ITEMSIZE(arr) != elsize) { + // This is internal sanity tests: elsize has been set to + // descr->elsize in the beginning of this function. + strcpy(mess, "failed to initialize intent(in) array"); + sprintf(mess + strlen(mess), + " -- expected elsize=%d got %" NPY_INTP_FMT, elsize, + (npy_intp)PyArray_ITEMSIZE(arr)); + PyErr_SetString(PyExc_ValueError, mess); + Py_DECREF(arr); + return NULL; + } + if (check_and_fix_dimensions(arr, rank, dims, errmess)) { + Py_DECREF(arr); + return NULL; + } + return arr; + } +} + +extern PyArrayObject * +array_from_pyobj(const int type_num, + npy_intp *dims, + const int rank, + const int intent, + PyObject *obj) { + /* + Same as ndarray_from_pyobj but with elsize determined from type, + if possible. Provided for backward compatibility. + */ + PyArray_Descr* descr = PyArray_DescrFromType(type_num); + int elsize = PyDataType_ELSIZE(descr); + Py_DECREF(descr); + return ndarray_from_pyobj(type_num, elsize, dims, rank, intent, obj, NULL); +} + +/*****************************************/ +/* Helper functions for array_from_pyobj */ +/*****************************************/ + +static int +check_and_fix_dimensions(const PyArrayObject* arr, const int rank, + npy_intp *dims, const char *errmess) +{ + /* + * This function fills in blanks (that are -1's) in dims list using + * the dimensions from arr. It also checks that non-blank dims will + * match with the corresponding values in arr dimensions. + * + * Returns 0 if the function is successful. + * + * If an error condition is detected, an exception is set and 1 is + * returned. + */ + char mess[F2PY_MESSAGE_BUFFER_SIZE]; + const npy_intp arr_size = + (PyArray_NDIM(arr)) ? PyArray_Size((PyObject *)arr) : 1; +#ifdef DEBUG_COPY_ND_ARRAY + dump_attrs(arr); + printf("check_and_fix_dimensions:init: dims="); + dump_dims(rank, dims); +#endif + if (rank > PyArray_NDIM(arr)) { /* [1,2] -> [[1],[2]]; 1 -> [[1]] */ + npy_intp new_size = 1; + int free_axe = -1; + int i; + npy_intp d; + /* Fill dims where -1 or 0; check dimensions; calc new_size; */ + for (i = 0; i < PyArray_NDIM(arr); ++i) { + d = PyArray_DIM(arr, i); + if (dims[i] >= 0) { + if (d > 1 && dims[i] != d) { + PyErr_Format( + PyExc_ValueError, + "%d-th dimension must be fixed to %" NPY_INTP_FMT + " but got %" NPY_INTP_FMT "\n", + i, dims[i], d); + return 1; + } + if (!dims[i]) + dims[i] = 1; + } + else { + dims[i] = d ? d : 1; + } + new_size *= dims[i]; + } + for (i = PyArray_NDIM(arr); i < rank; ++i) + if (dims[i] > 1) { + PyErr_Format(PyExc_ValueError, + "%d-th dimension must be %" NPY_INTP_FMT + " but got 0 (not defined).\n", + i, dims[i]); + return 1; + } + else if (free_axe < 0) + free_axe = i; + else + dims[i] = 1; + if (free_axe >= 0) { + dims[free_axe] = arr_size / new_size; + new_size *= dims[free_axe]; + } + if (new_size != arr_size) { + PyErr_Format(PyExc_ValueError, + "unexpected array size: new_size=%" NPY_INTP_FMT + ", got array with arr_size=%" NPY_INTP_FMT + " (maybe too many free indices)\n", + new_size, arr_size); + return 1; + } + } + else if (rank == PyArray_NDIM(arr)) { + npy_intp new_size = 1; + int i; + npy_intp d; + for (i = 0; i < rank; ++i) { + d = PyArray_DIM(arr, i); + if (dims[i] >= 0) { + if (d > 1 && d != dims[i]) { + if (errmess != NULL) { + strcpy(mess, errmess); + } + sprintf(mess + strlen(mess), + " -- %d-th dimension must be fixed to %" + NPY_INTP_FMT " but got %" NPY_INTP_FMT, + i, dims[i], d); + PyErr_SetString(PyExc_ValueError, mess); + return 1; + } + if (!dims[i]) + dims[i] = 1; + } + else + dims[i] = d; + new_size *= dims[i]; + } + if (new_size != arr_size) { + PyErr_Format(PyExc_ValueError, + "unexpected array size: new_size=%" NPY_INTP_FMT + ", got array with arr_size=%" NPY_INTP_FMT "\n", + new_size, arr_size); + return 1; + } + } + else { /* [[1,2]] -> [[1],[2]] */ + int i, j; + npy_intp d; + int effrank; + npy_intp size; + for (i = 0, effrank = 0; i < PyArray_NDIM(arr); ++i) + if (PyArray_DIM(arr, i) > 1) + ++effrank; + if (dims[rank - 1] >= 0) + if (effrank > rank) { + PyErr_Format(PyExc_ValueError, + "too many axes: %d (effrank=%d), " + "expected rank=%d\n", + PyArray_NDIM(arr), effrank, rank); + return 1; + } + + for (i = 0, j = 0; i < rank; ++i) { + while (j < PyArray_NDIM(arr) && PyArray_DIM(arr, j) < 2) ++j; + if (j >= PyArray_NDIM(arr)) + d = 1; + else + d = PyArray_DIM(arr, j++); + if (dims[i] >= 0) { + if (d > 1 && d != dims[i]) { + if (errmess != NULL) { + strcpy(mess, errmess); + } + sprintf(mess + strlen(mess), + " -- %d-th dimension must be fixed to %" + NPY_INTP_FMT " but got %" NPY_INTP_FMT + " (real index=%d)\n", + i, dims[i], d, j-1); + PyErr_SetString(PyExc_ValueError, mess); + return 1; + } + if (!dims[i]) + dims[i] = 1; + } + else + dims[i] = d; + } + + for (i = rank; i < PyArray_NDIM(arr); + ++i) { /* [[1,2],[3,4]] -> [1,2,3,4] */ + while (j < PyArray_NDIM(arr) && PyArray_DIM(arr, j) < 2) ++j; + if (j >= PyArray_NDIM(arr)) + d = 1; + else + d = PyArray_DIM(arr, j++); + dims[rank - 1] *= d; + } + for (i = 0, size = 1; i < rank; ++i) size *= dims[i]; + if (size != arr_size) { + char msg[200]; + int len; + snprintf(msg, sizeof(msg), + "unexpected array size: size=%" NPY_INTP_FMT + ", arr_size=%" NPY_INTP_FMT + ", rank=%d, effrank=%d, arr.nd=%d, dims=[", + size, arr_size, rank, effrank, PyArray_NDIM(arr)); + for (i = 0; i < rank; ++i) { + len = strlen(msg); + snprintf(msg + len, sizeof(msg) - len, " %" NPY_INTP_FMT, + dims[i]); + } + len = strlen(msg); + snprintf(msg + len, sizeof(msg) - len, " ], arr.dims=["); + for (i = 0; i < PyArray_NDIM(arr); ++i) { + len = strlen(msg); + snprintf(msg + len, sizeof(msg) - len, " %" NPY_INTP_FMT, + PyArray_DIM(arr, i)); + } + len = strlen(msg); + snprintf(msg + len, sizeof(msg) - len, " ]\n"); + PyErr_SetString(PyExc_ValueError, msg); + return 1; + } + } +#ifdef DEBUG_COPY_ND_ARRAY + printf("check_and_fix_dimensions:end: dims="); + dump_dims(rank, dims); +#endif + return 0; +} + +/* End of file: array_from_pyobj.c */ + +/************************* copy_ND_array *******************************/ + +extern int +copy_ND_array(const PyArrayObject *arr, PyArrayObject *out) +{ + F2PY_REPORT_ON_ARRAY_COPY_FROMARR; + return PyArray_CopyInto(out, (PyArrayObject *)arr); +} + +/********************* Various utility functions ***********************/ + +extern int +f2py_describe(PyObject *obj, char *buf) { + /* + Write the description of a Python object to buf. The caller must + provide buffer with size sufficient to write the description. + + Return 1 on success. + */ + char localbuf[F2PY_MESSAGE_BUFFER_SIZE]; + if (PyBytes_Check(obj)) { + sprintf(localbuf, "%d-%s", (npy_int)PyBytes_GET_SIZE(obj), Py_TYPE(obj)->tp_name); + } else if (PyUnicode_Check(obj)) { + sprintf(localbuf, "%d-%s", (npy_int)PyUnicode_GET_LENGTH(obj), Py_TYPE(obj)->tp_name); + } else if (PyArray_CheckScalar(obj)) { + PyArrayObject* arr = (PyArrayObject*)obj; + sprintf(localbuf, "%c%" NPY_INTP_FMT "-%s-scalar", PyArray_DESCR(arr)->kind, PyArray_ITEMSIZE(arr), Py_TYPE(obj)->tp_name); + } else if (PyArray_Check(obj)) { + int i; + PyArrayObject* arr = (PyArrayObject*)obj; + strcpy(localbuf, "("); + for (i=0; ikind, PyArray_ITEMSIZE(arr), Py_TYPE(obj)->tp_name); + } else if (PySequence_Check(obj)) { + sprintf(localbuf, "%d-%s", (npy_int)PySequence_Length(obj), Py_TYPE(obj)->tp_name); + } else { + sprintf(localbuf, "%s instance", Py_TYPE(obj)->tp_name); + } + // TODO: detect the size of buf and make sure that size(buf) >= size(localbuf). + strcpy(buf, localbuf); + return 1; +} + +extern npy_intp +f2py_size_impl(PyArrayObject* var, ...) +{ + npy_intp sz = 0; + npy_intp dim; + npy_intp rank; + va_list argp; + va_start(argp, var); + dim = va_arg(argp, npy_int); + if (dim==-1) + { + sz = PyArray_SIZE(var); + } + else + { + rank = PyArray_NDIM(var); + if (dim>=1 && dim<=rank) + sz = PyArray_DIM(var, dim-1); + else + fprintf(stderr, "f2py_size: 2nd argument value=%" NPY_INTP_FMT + " fails to satisfy 1<=value<=%" NPY_INTP_FMT + ". Result will be 0.\n", dim, rank); + } + va_end(argp); + return sz; +} + +/*********************************************/ +/* Compatibility functions for Python >= 3.0 */ +/*********************************************/ + +PyObject * +F2PyCapsule_FromVoidPtr(void *ptr, void (*dtor)(PyObject *)) +{ + PyObject *ret = PyCapsule_New(ptr, NULL, dtor); + if (ret == NULL) { + PyErr_Clear(); + } + return ret; +} + +void * +F2PyCapsule_AsVoidPtr(PyObject *obj) +{ + void *ret = PyCapsule_GetPointer(obj, NULL); + if (ret == NULL) { + PyErr_Clear(); + } + return ret; +} + +int +F2PyCapsule_Check(PyObject *ptr) +{ + return PyCapsule_CheckExact(ptr); +} + +#ifdef __cplusplus +} +#endif +/************************* EOF fortranobject.c *******************************/ diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/src/fortranobject.h b/venv/lib/python3.12/site-packages/numpy/f2py/src/fortranobject.h new file mode 100644 index 0000000000000000000000000000000000000000..4aed2f60891b9e9ea2c16373b5959b0a346e7470 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/src/fortranobject.h @@ -0,0 +1,173 @@ +#ifndef Py_FORTRANOBJECT_H +#define Py_FORTRANOBJECT_H +#ifdef __cplusplus +extern "C" { +#endif + +#include + +#ifndef NPY_NO_DEPRECATED_API +#define NPY_NO_DEPRECATED_API NPY_API_VERSION +#endif +#ifdef FORTRANOBJECT_C +#define NO_IMPORT_ARRAY +#endif +#define PY_ARRAY_UNIQUE_SYMBOL _npy_f2py_ARRAY_API +#include "numpy/arrayobject.h" +#include "numpy/npy_3kcompat.h" + +#ifdef F2PY_REPORT_ATEXIT +#include +// clang-format off +extern void f2py_start_clock(void); +extern void f2py_stop_clock(void); +extern void f2py_start_call_clock(void); +extern void f2py_stop_call_clock(void); +extern void f2py_cb_start_clock(void); +extern void f2py_cb_stop_clock(void); +extern void f2py_cb_start_call_clock(void); +extern void f2py_cb_stop_call_clock(void); +extern void f2py_report_on_exit(int, void *); +// clang-format on +#endif + +#ifdef DMALLOC +#include "dmalloc.h" +#endif + +/* Fortran object interface */ + +/* +123456789-123456789-123456789-123456789-123456789-123456789-123456789-12 + +PyFortranObject represents various Fortran objects: +Fortran (module) routines, COMMON blocks, module data. + +Author: Pearu Peterson +*/ + +#define F2PY_MAX_DIMS 40 +#define F2PY_MESSAGE_BUFFER_SIZE 300 // Increase on "stack smashing detected" + +typedef void (*f2py_set_data_func)(char *, npy_intp *); +typedef void (*f2py_void_func)(void); +typedef void (*f2py_init_func)(int *, npy_intp *, f2py_set_data_func, int *); + +/*typedef void* (*f2py_c_func)(void*,...);*/ + +typedef void *(*f2pycfunc)(void); + +typedef struct { + char *name; /* attribute (array||routine) name */ + int rank; /* array rank, 0 for scalar, max is F2PY_MAX_DIMS, + || rank=-1 for Fortran routine */ + struct { + npy_intp d[F2PY_MAX_DIMS]; + } dims; /* dimensions of the array, || not used */ + int type; /* PyArray_ || not used */ + int elsize; /* Element size || not used */ + char *data; /* pointer to array || Fortran routine */ + f2py_init_func func; /* initialization function for + allocatable arrays: + func(&rank,dims,set_ptr_func,name,len(name)) + || C/API wrapper for Fortran routine */ + char *doc; /* documentation string; only recommended + for routines. */ +} FortranDataDef; + +typedef struct { + PyObject_HEAD + int len; /* Number of attributes */ + FortranDataDef *defs; /* An array of FortranDataDef's */ + PyObject *dict; /* Fortran object attribute dictionary */ +} PyFortranObject; + +#define PyFortran_Check(op) (Py_TYPE(op) == &PyFortran_Type) +#define PyFortran_Check1(op) (0 == strcmp(Py_TYPE(op)->tp_name, "fortran")) + +extern PyTypeObject PyFortran_Type; +extern int +F2PyDict_SetItemString(PyObject *dict, char *name, PyObject *obj); +extern PyObject * +PyFortranObject_New(FortranDataDef *defs, f2py_void_func init); +extern PyObject * +PyFortranObject_NewAsAttr(FortranDataDef *defs); + +PyObject * +F2PyCapsule_FromVoidPtr(void *ptr, void (*dtor)(PyObject *)); +void * +F2PyCapsule_AsVoidPtr(PyObject *obj); +int +F2PyCapsule_Check(PyObject *ptr); + +extern void * +F2PySwapThreadLocalCallbackPtr(char *key, void *ptr); +extern void * +F2PyGetThreadLocalCallbackPtr(char *key); + +#define ISCONTIGUOUS(m) (PyArray_FLAGS(m) & NPY_ARRAY_C_CONTIGUOUS) +#define F2PY_INTENT_IN 1 +#define F2PY_INTENT_INOUT 2 +#define F2PY_INTENT_OUT 4 +#define F2PY_INTENT_HIDE 8 +#define F2PY_INTENT_CACHE 16 +#define F2PY_INTENT_COPY 32 +#define F2PY_INTENT_C 64 +#define F2PY_OPTIONAL 128 +#define F2PY_INTENT_INPLACE 256 +#define F2PY_INTENT_ALIGNED4 512 +#define F2PY_INTENT_ALIGNED8 1024 +#define F2PY_INTENT_ALIGNED16 2048 + +#define ARRAY_ISALIGNED(ARR, SIZE) ((size_t)(PyArray_DATA(ARR)) % (SIZE) == 0) +#define F2PY_ALIGN4(intent) (intent & F2PY_INTENT_ALIGNED4) +#define F2PY_ALIGN8(intent) (intent & F2PY_INTENT_ALIGNED8) +#define F2PY_ALIGN16(intent) (intent & F2PY_INTENT_ALIGNED16) + +#define F2PY_GET_ALIGNMENT(intent) \ + (F2PY_ALIGN4(intent) \ + ? 4 \ + : (F2PY_ALIGN8(intent) ? 8 : (F2PY_ALIGN16(intent) ? 16 : 1))) +#define F2PY_CHECK_ALIGNMENT(arr, intent) \ + ARRAY_ISALIGNED(arr, F2PY_GET_ALIGNMENT(intent)) +#define F2PY_ARRAY_IS_CHARACTER_COMPATIBLE(arr) ((PyArray_DESCR(arr)->type_num == NPY_STRING && PyArray_ITEMSIZE(arr) >= 1) \ + || PyArray_DESCR(arr)->type_num == NPY_UINT8) +#define F2PY_IS_UNICODE_ARRAY(arr) (PyArray_DESCR(arr)->type_num == NPY_UNICODE) + +extern PyArrayObject * +ndarray_from_pyobj(const int type_num, const int elsize_, npy_intp *dims, + const int rank, const int intent, PyObject *obj, + const char *errmess); + +extern PyArrayObject * +array_from_pyobj(const int type_num, npy_intp *dims, const int rank, + const int intent, PyObject *obj); +extern int +copy_ND_array(const PyArrayObject *in, PyArrayObject *out); + +#ifdef DEBUG_COPY_ND_ARRAY +extern void +dump_attrs(const PyArrayObject *arr); +#endif + + extern int f2py_describe(PyObject *obj, char *buf); + + /* Utility CPP macros and functions that can be used in signature file + expressions. See signature-file.rst for documentation. + */ + +#define f2py_itemsize(var) (PyArray_ITEMSIZE(capi_ ## var ## _as_array)) +#define f2py_size(var, ...) f2py_size_impl((PyArrayObject *)(capi_ ## var ## _as_array), ## __VA_ARGS__, -1) +#define f2py_rank(var) var ## _Rank +#define f2py_shape(var,dim) var ## _Dims[dim] +#define f2py_len(var) f2py_shape(var,0) +#define f2py_fshape(var,dim) f2py_shape(var,rank(var)-dim-1) +#define f2py_flen(var) f2py_fshape(var,0) +#define f2py_slen(var) capi_ ## var ## _len + + extern npy_intp f2py_size_impl(PyArrayObject* var, ...); + +#ifdef __cplusplus +} +#endif +#endif /* !Py_FORTRANOBJECT_H */ diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/symbolic.py b/venv/lib/python3.12/site-packages/numpy/f2py/symbolic.py new file mode 100644 index 0000000000000000000000000000000000000000..67120d79a51e685626b3bc2d49f59e24ddfcb4a6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/symbolic.py @@ -0,0 +1,1517 @@ +"""Fortran/C symbolic expressions + +References: +- J3/21-007: Draft Fortran 202x. https://j3-fortran.org/doc/year/21/21-007.pdf + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" + +# To analyze Fortran expressions to solve dimensions specifications, +# for instances, we implement a minimal symbolic engine for parsing +# expressions into a tree of expression instances. As a first +# instance, we care only about arithmetic expressions involving +# integers and operations like addition (+), subtraction (-), +# multiplication (*), division (Fortran / is Python //, Fortran // is +# concatenate), and exponentiation (**). In addition, .pyf files may +# contain C expressions that support here is implemented as well. +# +# TODO: support logical constants (Op.BOOLEAN) +# TODO: support logical operators (.AND., ...) +# TODO: support defined operators (.MYOP., ...) +# +__all__ = ['Expr'] + + +import re +import warnings +from enum import Enum +from math import gcd + + +class Language(Enum): + """ + Used as Expr.tostring language argument. + """ + Python = 0 + Fortran = 1 + C = 2 + + +class Op(Enum): + """ + Used as Expr op attribute. + """ + INTEGER = 10 + REAL = 12 + COMPLEX = 15 + STRING = 20 + ARRAY = 30 + SYMBOL = 40 + TERNARY = 100 + APPLY = 200 + INDEXING = 210 + CONCAT = 220 + RELATIONAL = 300 + TERMS = 1000 + FACTORS = 2000 + REF = 3000 + DEREF = 3001 + + +class RelOp(Enum): + """ + Used in Op.RELATIONAL expression to specify the function part. + """ + EQ = 1 + NE = 2 + LT = 3 + LE = 4 + GT = 5 + GE = 6 + + @classmethod + def fromstring(cls, s, language=Language.C): + if language is Language.Fortran: + return {'.eq.': RelOp.EQ, '.ne.': RelOp.NE, + '.lt.': RelOp.LT, '.le.': RelOp.LE, + '.gt.': RelOp.GT, '.ge.': RelOp.GE}[s.lower()] + return {'==': RelOp.EQ, '!=': RelOp.NE, '<': RelOp.LT, + '<=': RelOp.LE, '>': RelOp.GT, '>=': RelOp.GE}[s] + + def tostring(self, language=Language.C): + if language is Language.Fortran: + return {RelOp.EQ: '.eq.', RelOp.NE: '.ne.', + RelOp.LT: '.lt.', RelOp.LE: '.le.', + RelOp.GT: '.gt.', RelOp.GE: '.ge.'}[self] + return {RelOp.EQ: '==', RelOp.NE: '!=', + RelOp.LT: '<', RelOp.LE: '<=', + RelOp.GT: '>', RelOp.GE: '>='}[self] + + +class ArithOp(Enum): + """ + Used in Op.APPLY expression to specify the function part. + """ + POS = 1 + NEG = 2 + ADD = 3 + SUB = 4 + MUL = 5 + DIV = 6 + POW = 7 + + +class OpError(Exception): + pass + + +class Precedence(Enum): + """ + Used as Expr.tostring precedence argument. + """ + ATOM = 0 + POWER = 1 + UNARY = 2 + PRODUCT = 3 + SUM = 4 + LT = 6 + EQ = 7 + LAND = 11 + LOR = 12 + TERNARY = 13 + ASSIGN = 14 + TUPLE = 15 + NONE = 100 + + +integer_types = (int,) +number_types = (int, float) + + +def _pairs_add(d, k, v): + # Internal utility method for updating terms and factors data. + c = d.get(k) + if c is None: + d[k] = v + else: + c = c + v + if c: + d[k] = c + else: + del d[k] + + +class ExprWarning(UserWarning): + pass + + +def ewarn(message): + warnings.warn(message, ExprWarning, stacklevel=2) + + +class Expr: + """Represents a Fortran expression as a op-data pair. + + Expr instances are hashable and sortable. + """ + + @staticmethod + def parse(s, language=Language.C): + """Parse a Fortran expression to a Expr. + """ + return fromstring(s, language=language) + + def __init__(self, op, data): + assert isinstance(op, Op) + + # sanity checks + if op is Op.INTEGER: + # data is a 2-tuple of numeric object and a kind value + # (default is 4) + assert isinstance(data, tuple) and len(data) == 2 + assert isinstance(data[0], int) + assert isinstance(data[1], (int, str)), data + elif op is Op.REAL: + # data is a 2-tuple of numeric object and a kind value + # (default is 4) + assert isinstance(data, tuple) and len(data) == 2 + assert isinstance(data[0], float) + assert isinstance(data[1], (int, str)), data + elif op is Op.COMPLEX: + # data is a 2-tuple of constant expressions + assert isinstance(data, tuple) and len(data) == 2 + elif op is Op.STRING: + # data is a 2-tuple of quoted string and a kind value + # (default is 1) + assert isinstance(data, tuple) and len(data) == 2 + assert (isinstance(data[0], str) + and data[0][::len(data[0])-1] in ('""', "''", '@@')) + assert isinstance(data[1], (int, str)), data + elif op is Op.SYMBOL: + # data is any hashable object + assert hash(data) is not None + elif op in (Op.ARRAY, Op.CONCAT): + # data is a tuple of expressions + assert isinstance(data, tuple) + assert all(isinstance(item, Expr) for item in data), data + elif op in (Op.TERMS, Op.FACTORS): + # data is {:} where dict values + # are nonzero Python integers + assert isinstance(data, dict) + elif op is Op.APPLY: + # data is (, , ) where + # operands are Expr instances + assert isinstance(data, tuple) and len(data) == 3 + # function is any hashable object + assert hash(data[0]) is not None + assert isinstance(data[1], tuple) + assert isinstance(data[2], dict) + elif op is Op.INDEXING: + # data is (, ) + assert isinstance(data, tuple) and len(data) == 2 + # function is any hashable object + assert hash(data[0]) is not None + elif op is Op.TERNARY: + # data is (, , ) + assert isinstance(data, tuple) and len(data) == 3 + elif op in (Op.REF, Op.DEREF): + # data is Expr instance + assert isinstance(data, Expr) + elif op is Op.RELATIONAL: + # data is (, , ) + assert isinstance(data, tuple) and len(data) == 3 + else: + raise NotImplementedError( + f'unknown op or missing sanity check: {op}') + + self.op = op + self.data = data + + def __eq__(self, other): + return (isinstance(other, Expr) + and self.op is other.op + and self.data == other.data) + + def __hash__(self): + if self.op in (Op.TERMS, Op.FACTORS): + data = tuple(sorted(self.data.items())) + elif self.op is Op.APPLY: + data = self.data[:2] + tuple(sorted(self.data[2].items())) + else: + data = self.data + return hash((self.op, data)) + + def __lt__(self, other): + if isinstance(other, Expr): + if self.op is not other.op: + return self.op.value < other.op.value + if self.op in (Op.TERMS, Op.FACTORS): + return (tuple(sorted(self.data.items())) + < tuple(sorted(other.data.items()))) + if self.op is Op.APPLY: + if self.data[:2] != other.data[:2]: + return self.data[:2] < other.data[:2] + return tuple(sorted(self.data[2].items())) < tuple( + sorted(other.data[2].items())) + return self.data < other.data + return NotImplemented + + def __le__(self, other): return self == other or self < other + + def __gt__(self, other): return not (self <= other) + + def __ge__(self, other): return not (self < other) + + def __repr__(self): + return f'{type(self).__name__}({self.op}, {self.data!r})' + + def __str__(self): + return self.tostring() + + def tostring(self, parent_precedence=Precedence.NONE, + language=Language.Fortran): + """Return a string representation of Expr. + """ + if self.op in (Op.INTEGER, Op.REAL): + precedence = (Precedence.SUM if self.data[0] < 0 + else Precedence.ATOM) + r = str(self.data[0]) + (f'_{self.data[1]}' + if self.data[1] != 4 else '') + elif self.op is Op.COMPLEX: + r = ', '.join(item.tostring(Precedence.TUPLE, language=language) + for item in self.data) + r = '(' + r + ')' + precedence = Precedence.ATOM + elif self.op is Op.SYMBOL: + precedence = Precedence.ATOM + r = str(self.data) + elif self.op is Op.STRING: + r = self.data[0] + if self.data[1] != 1: + r = self.data[1] + '_' + r + precedence = Precedence.ATOM + elif self.op is Op.ARRAY: + r = ', '.join(item.tostring(Precedence.TUPLE, language=language) + for item in self.data) + r = '[' + r + ']' + precedence = Precedence.ATOM + elif self.op is Op.TERMS: + terms = [] + for term, coeff in sorted(self.data.items()): + if coeff < 0: + op = ' - ' + coeff = -coeff + else: + op = ' + ' + if coeff == 1: + term = term.tostring(Precedence.SUM, language=language) + else: + if term == as_number(1): + term = str(coeff) + else: + term = f'{coeff} * ' + term.tostring( + Precedence.PRODUCT, language=language) + if terms: + terms.append(op) + elif op == ' - ': + terms.append('-') + terms.append(term) + r = ''.join(terms) or '0' + precedence = Precedence.SUM if terms else Precedence.ATOM + elif self.op is Op.FACTORS: + factors = [] + tail = [] + for base, exp in sorted(self.data.items()): + op = ' * ' + if exp == 1: + factor = base.tostring(Precedence.PRODUCT, + language=language) + elif language is Language.C: + if exp in range(2, 10): + factor = base.tostring(Precedence.PRODUCT, + language=language) + factor = ' * '.join([factor] * exp) + elif exp in range(-10, 0): + factor = base.tostring(Precedence.PRODUCT, + language=language) + tail += [factor] * -exp + continue + else: + factor = base.tostring(Precedence.TUPLE, + language=language) + factor = f'pow({factor}, {exp})' + else: + factor = base.tostring(Precedence.POWER, + language=language) + f' ** {exp}' + if factors: + factors.append(op) + factors.append(factor) + if tail: + if not factors: + factors += ['1'] + factors += ['/', '(', ' * '.join(tail), ')'] + r = ''.join(factors) or '1' + precedence = Precedence.PRODUCT if factors else Precedence.ATOM + elif self.op is Op.APPLY: + name, args, kwargs = self.data + if name is ArithOp.DIV and language is Language.C: + numer, denom = [arg.tostring(Precedence.PRODUCT, + language=language) + for arg in args] + r = f'{numer} / {denom}' + precedence = Precedence.PRODUCT + else: + args = [arg.tostring(Precedence.TUPLE, language=language) + for arg in args] + args += [k + '=' + v.tostring(Precedence.NONE) + for k, v in kwargs.items()] + r = f'{name}({", ".join(args)})' + precedence = Precedence.ATOM + elif self.op is Op.INDEXING: + name = self.data[0] + args = [arg.tostring(Precedence.TUPLE, language=language) + for arg in self.data[1:]] + r = f'{name}[{", ".join(args)}]' + precedence = Precedence.ATOM + elif self.op is Op.CONCAT: + args = [arg.tostring(Precedence.PRODUCT, language=language) + for arg in self.data] + r = " // ".join(args) + precedence = Precedence.PRODUCT + elif self.op is Op.TERNARY: + cond, expr1, expr2 = [a.tostring(Precedence.TUPLE, + language=language) + for a in self.data] + if language is Language.C: + r = f'({cond}?{expr1}:{expr2})' + elif language is Language.Python: + r = f'({expr1} if {cond} else {expr2})' + elif language is Language.Fortran: + r = f'merge({expr1}, {expr2}, {cond})' + else: + raise NotImplementedError( + f'tostring for {self.op} and {language}') + precedence = Precedence.ATOM + elif self.op is Op.REF: + r = '&' + self.data.tostring(Precedence.UNARY, language=language) + precedence = Precedence.UNARY + elif self.op is Op.DEREF: + r = '*' + self.data.tostring(Precedence.UNARY, language=language) + precedence = Precedence.UNARY + elif self.op is Op.RELATIONAL: + rop, left, right = self.data + precedence = (Precedence.EQ if rop in (RelOp.EQ, RelOp.NE) + else Precedence.LT) + left = left.tostring(precedence, language=language) + right = right.tostring(precedence, language=language) + rop = rop.tostring(language=language) + r = f'{left} {rop} {right}' + else: + raise NotImplementedError(f'tostring for op {self.op}') + if parent_precedence.value < precedence.value: + # If parent precedence is higher than operand precedence, + # operand will be enclosed in parenthesis. + return '(' + r + ')' + return r + + def __pos__(self): + return self + + def __neg__(self): + return self * -1 + + def __add__(self, other): + other = as_expr(other) + if isinstance(other, Expr): + if self.op is other.op: + if self.op in (Op.INTEGER, Op.REAL): + return as_number( + self.data[0] + other.data[0], + max(self.data[1], other.data[1])) + if self.op is Op.COMPLEX: + r1, i1 = self.data + r2, i2 = other.data + return as_complex(r1 + r2, i1 + i2) + if self.op is Op.TERMS: + r = Expr(self.op, dict(self.data)) + for k, v in other.data.items(): + _pairs_add(r.data, k, v) + return normalize(r) + if self.op is Op.COMPLEX and other.op in (Op.INTEGER, Op.REAL): + return self + as_complex(other) + elif self.op in (Op.INTEGER, Op.REAL) and other.op is Op.COMPLEX: + return as_complex(self) + other + elif self.op is Op.REAL and other.op is Op.INTEGER: + return self + as_real(other, kind=self.data[1]) + elif self.op is Op.INTEGER and other.op is Op.REAL: + return as_real(self, kind=other.data[1]) + other + return as_terms(self) + as_terms(other) + return NotImplemented + + def __radd__(self, other): + if isinstance(other, number_types): + return as_number(other) + self + return NotImplemented + + def __sub__(self, other): + return self + (-other) + + def __rsub__(self, other): + if isinstance(other, number_types): + return as_number(other) - self + return NotImplemented + + def __mul__(self, other): + other = as_expr(other) + if isinstance(other, Expr): + if self.op is other.op: + if self.op in (Op.INTEGER, Op.REAL): + return as_number(self.data[0] * other.data[0], + max(self.data[1], other.data[1])) + elif self.op is Op.COMPLEX: + r1, i1 = self.data + r2, i2 = other.data + return as_complex(r1 * r2 - i1 * i2, r1 * i2 + r2 * i1) + + if self.op is Op.FACTORS: + r = Expr(self.op, dict(self.data)) + for k, v in other.data.items(): + _pairs_add(r.data, k, v) + return normalize(r) + elif self.op is Op.TERMS: + r = Expr(self.op, {}) + for t1, c1 in self.data.items(): + for t2, c2 in other.data.items(): + _pairs_add(r.data, t1 * t2, c1 * c2) + return normalize(r) + + if self.op is Op.COMPLEX and other.op in (Op.INTEGER, Op.REAL): + return self * as_complex(other) + elif other.op is Op.COMPLEX and self.op in (Op.INTEGER, Op.REAL): + return as_complex(self) * other + elif self.op is Op.REAL and other.op is Op.INTEGER: + return self * as_real(other, kind=self.data[1]) + elif self.op is Op.INTEGER and other.op is Op.REAL: + return as_real(self, kind=other.data[1]) * other + + if self.op is Op.TERMS: + return self * as_terms(other) + elif other.op is Op.TERMS: + return as_terms(self) * other + + return as_factors(self) * as_factors(other) + return NotImplemented + + def __rmul__(self, other): + if isinstance(other, number_types): + return as_number(other) * self + return NotImplemented + + def __pow__(self, other): + other = as_expr(other) + if isinstance(other, Expr): + if other.op is Op.INTEGER: + exponent = other.data[0] + # TODO: other kind not used + if exponent == 0: + return as_number(1) + if exponent == 1: + return self + if exponent > 0: + if self.op is Op.FACTORS: + r = Expr(self.op, {}) + for k, v in self.data.items(): + r.data[k] = v * exponent + return normalize(r) + return self * (self ** (exponent - 1)) + elif exponent != -1: + return (self ** (-exponent)) ** -1 + return Expr(Op.FACTORS, {self: exponent}) + return as_apply(ArithOp.POW, self, other) + return NotImplemented + + def __truediv__(self, other): + other = as_expr(other) + if isinstance(other, Expr): + # Fortran / is different from Python /: + # - `/` is a truncate operation for integer operands + return normalize(as_apply(ArithOp.DIV, self, other)) + return NotImplemented + + def __rtruediv__(self, other): + other = as_expr(other) + if isinstance(other, Expr): + return other / self + return NotImplemented + + def __floordiv__(self, other): + other = as_expr(other) + if isinstance(other, Expr): + # Fortran // is different from Python //: + # - `//` is a concatenate operation for string operands + return normalize(Expr(Op.CONCAT, (self, other))) + return NotImplemented + + def __rfloordiv__(self, other): + other = as_expr(other) + if isinstance(other, Expr): + return other // self + return NotImplemented + + def __call__(self, *args, **kwargs): + # In Fortran, parenthesis () are use for both function call as + # well as indexing operations. + # + # TODO: implement a method for deciding when __call__ should + # return an INDEXING expression. + return as_apply(self, *map(as_expr, args), + **dict((k, as_expr(v)) for k, v in kwargs.items())) + + def __getitem__(self, index): + # Provided to support C indexing operations that .pyf files + # may contain. + index = as_expr(index) + if not isinstance(index, tuple): + index = index, + if len(index) > 1: + ewarn(f'C-index should be a single expression but got `{index}`') + return Expr(Op.INDEXING, (self,) + index) + + def substitute(self, symbols_map): + """Recursively substitute symbols with values in symbols map. + + Symbols map is a dictionary of symbol-expression pairs. + """ + if self.op is Op.SYMBOL: + value = symbols_map.get(self) + if value is None: + return self + m = re.match(r'\A(@__f2py_PARENTHESIS_(\w+)_\d+@)\Z', self.data) + if m: + # complement to fromstring method + items, paren = m.groups() + if paren in ['ROUNDDIV', 'SQUARE']: + return as_array(value) + assert paren == 'ROUND', (paren, value) + return value + if self.op in (Op.INTEGER, Op.REAL, Op.STRING): + return self + if self.op in (Op.ARRAY, Op.COMPLEX): + return Expr(self.op, tuple(item.substitute(symbols_map) + for item in self.data)) + if self.op is Op.CONCAT: + return normalize(Expr(self.op, tuple(item.substitute(symbols_map) + for item in self.data))) + if self.op is Op.TERMS: + r = None + for term, coeff in self.data.items(): + if r is None: + r = term.substitute(symbols_map) * coeff + else: + r += term.substitute(symbols_map) * coeff + if r is None: + ewarn('substitute: empty TERMS expression interpreted as' + ' int-literal 0') + return as_number(0) + return r + if self.op is Op.FACTORS: + r = None + for base, exponent in self.data.items(): + if r is None: + r = base.substitute(symbols_map) ** exponent + else: + r *= base.substitute(symbols_map) ** exponent + if r is None: + ewarn('substitute: empty FACTORS expression interpreted' + ' as int-literal 1') + return as_number(1) + return r + if self.op is Op.APPLY: + target, args, kwargs = self.data + if isinstance(target, Expr): + target = target.substitute(symbols_map) + args = tuple(a.substitute(symbols_map) for a in args) + kwargs = dict((k, v.substitute(symbols_map)) + for k, v in kwargs.items()) + return normalize(Expr(self.op, (target, args, kwargs))) + if self.op is Op.INDEXING: + func = self.data[0] + if isinstance(func, Expr): + func = func.substitute(symbols_map) + args = tuple(a.substitute(symbols_map) for a in self.data[1:]) + return normalize(Expr(self.op, (func,) + args)) + if self.op is Op.TERNARY: + operands = tuple(a.substitute(symbols_map) for a in self.data) + return normalize(Expr(self.op, operands)) + if self.op in (Op.REF, Op.DEREF): + return normalize(Expr(self.op, self.data.substitute(symbols_map))) + if self.op is Op.RELATIONAL: + rop, left, right = self.data + left = left.substitute(symbols_map) + right = right.substitute(symbols_map) + return normalize(Expr(self.op, (rop, left, right))) + raise NotImplementedError(f'substitute method for {self.op}: {self!r}') + + def traverse(self, visit, *args, **kwargs): + """Traverse expression tree with visit function. + + The visit function is applied to an expression with given args + and kwargs. + + Traverse call returns an expression returned by visit when not + None, otherwise return a new normalized expression with + traverse-visit sub-expressions. + """ + result = visit(self, *args, **kwargs) + if result is not None: + return result + + if self.op in (Op.INTEGER, Op.REAL, Op.STRING, Op.SYMBOL): + return self + elif self.op in (Op.COMPLEX, Op.ARRAY, Op.CONCAT, Op.TERNARY): + return normalize(Expr(self.op, tuple( + item.traverse(visit, *args, **kwargs) + for item in self.data))) + elif self.op in (Op.TERMS, Op.FACTORS): + data = {} + for k, v in self.data.items(): + k = k.traverse(visit, *args, **kwargs) + v = (v.traverse(visit, *args, **kwargs) + if isinstance(v, Expr) else v) + if k in data: + v = data[k] + v + data[k] = v + return normalize(Expr(self.op, data)) + elif self.op is Op.APPLY: + obj = self.data[0] + func = (obj.traverse(visit, *args, **kwargs) + if isinstance(obj, Expr) else obj) + operands = tuple(operand.traverse(visit, *args, **kwargs) + for operand in self.data[1]) + kwoperands = dict((k, v.traverse(visit, *args, **kwargs)) + for k, v in self.data[2].items()) + return normalize(Expr(self.op, (func, operands, kwoperands))) + elif self.op is Op.INDEXING: + obj = self.data[0] + obj = (obj.traverse(visit, *args, **kwargs) + if isinstance(obj, Expr) else obj) + indices = tuple(index.traverse(visit, *args, **kwargs) + for index in self.data[1:]) + return normalize(Expr(self.op, (obj,) + indices)) + elif self.op in (Op.REF, Op.DEREF): + return normalize(Expr(self.op, + self.data.traverse(visit, *args, **kwargs))) + elif self.op is Op.RELATIONAL: + rop, left, right = self.data + left = left.traverse(visit, *args, **kwargs) + right = right.traverse(visit, *args, **kwargs) + return normalize(Expr(self.op, (rop, left, right))) + raise NotImplementedError(f'traverse method for {self.op}') + + def contains(self, other): + """Check if self contains other. + """ + found = [] + + def visit(expr, found=found): + if found: + return expr + elif expr == other: + found.append(1) + return expr + + self.traverse(visit) + + return len(found) != 0 + + def symbols(self): + """Return a set of symbols contained in self. + """ + found = set() + + def visit(expr, found=found): + if expr.op is Op.SYMBOL: + found.add(expr) + + self.traverse(visit) + + return found + + def polynomial_atoms(self): + """Return a set of expressions used as atoms in polynomial self. + """ + found = set() + + def visit(expr, found=found): + if expr.op is Op.FACTORS: + for b in expr.data: + b.traverse(visit) + return expr + if expr.op in (Op.TERMS, Op.COMPLEX): + return + if expr.op is Op.APPLY and isinstance(expr.data[0], ArithOp): + if expr.data[0] is ArithOp.POW: + expr.data[1][0].traverse(visit) + return expr + return + if expr.op in (Op.INTEGER, Op.REAL): + return expr + + found.add(expr) + + if expr.op in (Op.INDEXING, Op.APPLY): + return expr + + self.traverse(visit) + + return found + + def linear_solve(self, symbol): + """Return a, b such that a * symbol + b == self. + + If self is not linear with respect to symbol, raise RuntimeError. + """ + b = self.substitute({symbol: as_number(0)}) + ax = self - b + a = ax.substitute({symbol: as_number(1)}) + + zero, _ = as_numer_denom(a * symbol - ax) + + if zero != as_number(0): + raise RuntimeError(f'not a {symbol}-linear equation:' + f' {a} * {symbol} + {b} == {self}') + return a, b + + +def normalize(obj): + """Normalize Expr and apply basic evaluation methods. + """ + if not isinstance(obj, Expr): + return obj + + if obj.op is Op.TERMS: + d = {} + for t, c in obj.data.items(): + if c == 0: + continue + if t.op is Op.COMPLEX and c != 1: + t = t * c + c = 1 + if t.op is Op.TERMS: + for t1, c1 in t.data.items(): + _pairs_add(d, t1, c1 * c) + else: + _pairs_add(d, t, c) + if len(d) == 0: + # TODO: determine correct kind + return as_number(0) + elif len(d) == 1: + (t, c), = d.items() + if c == 1: + return t + return Expr(Op.TERMS, d) + + if obj.op is Op.FACTORS: + coeff = 1 + d = {} + for b, e in obj.data.items(): + if e == 0: + continue + if b.op is Op.TERMS and isinstance(e, integer_types) and e > 1: + # expand integer powers of sums + b = b * (b ** (e - 1)) + e = 1 + + if b.op in (Op.INTEGER, Op.REAL): + if e == 1: + coeff *= b.data[0] + elif e > 0: + coeff *= b.data[0] ** e + else: + _pairs_add(d, b, e) + elif b.op is Op.FACTORS: + if e > 0 and isinstance(e, integer_types): + for b1, e1 in b.data.items(): + _pairs_add(d, b1, e1 * e) + else: + _pairs_add(d, b, e) + else: + _pairs_add(d, b, e) + if len(d) == 0 or coeff == 0: + # TODO: determine correct kind + assert isinstance(coeff, number_types) + return as_number(coeff) + elif len(d) == 1: + (b, e), = d.items() + if e == 1: + t = b + else: + t = Expr(Op.FACTORS, d) + if coeff == 1: + return t + return Expr(Op.TERMS, {t: coeff}) + elif coeff == 1: + return Expr(Op.FACTORS, d) + else: + return Expr(Op.TERMS, {Expr(Op.FACTORS, d): coeff}) + + if obj.op is Op.APPLY and obj.data[0] is ArithOp.DIV: + dividend, divisor = obj.data[1] + t1, c1 = as_term_coeff(dividend) + t2, c2 = as_term_coeff(divisor) + if isinstance(c1, integer_types) and isinstance(c2, integer_types): + g = gcd(c1, c2) + c1, c2 = c1//g, c2//g + else: + c1, c2 = c1/c2, 1 + + if t1.op is Op.APPLY and t1.data[0] is ArithOp.DIV: + numer = t1.data[1][0] * c1 + denom = t1.data[1][1] * t2 * c2 + return as_apply(ArithOp.DIV, numer, denom) + + if t2.op is Op.APPLY and t2.data[0] is ArithOp.DIV: + numer = t2.data[1][1] * t1 * c1 + denom = t2.data[1][0] * c2 + return as_apply(ArithOp.DIV, numer, denom) + + d = dict(as_factors(t1).data) + for b, e in as_factors(t2).data.items(): + _pairs_add(d, b, -e) + numer, denom = {}, {} + for b, e in d.items(): + if e > 0: + numer[b] = e + else: + denom[b] = -e + numer = normalize(Expr(Op.FACTORS, numer)) * c1 + denom = normalize(Expr(Op.FACTORS, denom)) * c2 + + if denom.op in (Op.INTEGER, Op.REAL) and denom.data[0] == 1: + # TODO: denom kind not used + return numer + return as_apply(ArithOp.DIV, numer, denom) + + if obj.op is Op.CONCAT: + lst = [obj.data[0]] + for s in obj.data[1:]: + last = lst[-1] + if ( + last.op is Op.STRING + and s.op is Op.STRING + and last.data[0][0] in '"\'' + and s.data[0][0] == last.data[0][-1] + ): + new_last = as_string(last.data[0][:-1] + s.data[0][1:], + max(last.data[1], s.data[1])) + lst[-1] = new_last + else: + lst.append(s) + if len(lst) == 1: + return lst[0] + return Expr(Op.CONCAT, tuple(lst)) + + if obj.op is Op.TERNARY: + cond, expr1, expr2 = map(normalize, obj.data) + if cond.op is Op.INTEGER: + return expr1 if cond.data[0] else expr2 + return Expr(Op.TERNARY, (cond, expr1, expr2)) + + return obj + + +def as_expr(obj): + """Convert non-Expr objects to Expr objects. + """ + if isinstance(obj, complex): + return as_complex(obj.real, obj.imag) + if isinstance(obj, number_types): + return as_number(obj) + if isinstance(obj, str): + # STRING expression holds string with boundary quotes, hence + # applying repr: + return as_string(repr(obj)) + if isinstance(obj, tuple): + return tuple(map(as_expr, obj)) + return obj + + +def as_symbol(obj): + """Return object as SYMBOL expression (variable or unparsed expression). + """ + return Expr(Op.SYMBOL, obj) + + +def as_number(obj, kind=4): + """Return object as INTEGER or REAL constant. + """ + if isinstance(obj, int): + return Expr(Op.INTEGER, (obj, kind)) + if isinstance(obj, float): + return Expr(Op.REAL, (obj, kind)) + if isinstance(obj, Expr): + if obj.op in (Op.INTEGER, Op.REAL): + return obj + raise OpError(f'cannot convert {obj} to INTEGER or REAL constant') + + +def as_integer(obj, kind=4): + """Return object as INTEGER constant. + """ + if isinstance(obj, int): + return Expr(Op.INTEGER, (obj, kind)) + if isinstance(obj, Expr): + if obj.op is Op.INTEGER: + return obj + raise OpError(f'cannot convert {obj} to INTEGER constant') + + +def as_real(obj, kind=4): + """Return object as REAL constant. + """ + if isinstance(obj, int): + return Expr(Op.REAL, (float(obj), kind)) + if isinstance(obj, float): + return Expr(Op.REAL, (obj, kind)) + if isinstance(obj, Expr): + if obj.op is Op.REAL: + return obj + elif obj.op is Op.INTEGER: + return Expr(Op.REAL, (float(obj.data[0]), kind)) + raise OpError(f'cannot convert {obj} to REAL constant') + + +def as_string(obj, kind=1): + """Return object as STRING expression (string literal constant). + """ + return Expr(Op.STRING, (obj, kind)) + + +def as_array(obj): + """Return object as ARRAY expression (array constant). + """ + if isinstance(obj, Expr): + obj = obj, + return Expr(Op.ARRAY, obj) + + +def as_complex(real, imag=0): + """Return object as COMPLEX expression (complex literal constant). + """ + return Expr(Op.COMPLEX, (as_expr(real), as_expr(imag))) + + +def as_apply(func, *args, **kwargs): + """Return object as APPLY expression (function call, constructor, etc.) + """ + return Expr(Op.APPLY, + (func, tuple(map(as_expr, args)), + dict((k, as_expr(v)) for k, v in kwargs.items()))) + + +def as_ternary(cond, expr1, expr2): + """Return object as TERNARY expression (cond?expr1:expr2). + """ + return Expr(Op.TERNARY, (cond, expr1, expr2)) + + +def as_ref(expr): + """Return object as referencing expression. + """ + return Expr(Op.REF, expr) + + +def as_deref(expr): + """Return object as dereferencing expression. + """ + return Expr(Op.DEREF, expr) + + +def as_eq(left, right): + return Expr(Op.RELATIONAL, (RelOp.EQ, left, right)) + + +def as_ne(left, right): + return Expr(Op.RELATIONAL, (RelOp.NE, left, right)) + + +def as_lt(left, right): + return Expr(Op.RELATIONAL, (RelOp.LT, left, right)) + + +def as_le(left, right): + return Expr(Op.RELATIONAL, (RelOp.LE, left, right)) + + +def as_gt(left, right): + return Expr(Op.RELATIONAL, (RelOp.GT, left, right)) + + +def as_ge(left, right): + return Expr(Op.RELATIONAL, (RelOp.GE, left, right)) + + +def as_terms(obj): + """Return expression as TERMS expression. + """ + if isinstance(obj, Expr): + obj = normalize(obj) + if obj.op is Op.TERMS: + return obj + if obj.op is Op.INTEGER: + return Expr(Op.TERMS, {as_integer(1, obj.data[1]): obj.data[0]}) + if obj.op is Op.REAL: + return Expr(Op.TERMS, {as_real(1, obj.data[1]): obj.data[0]}) + return Expr(Op.TERMS, {obj: 1}) + raise OpError(f'cannot convert {type(obj)} to terms Expr') + + +def as_factors(obj): + """Return expression as FACTORS expression. + """ + if isinstance(obj, Expr): + obj = normalize(obj) + if obj.op is Op.FACTORS: + return obj + if obj.op is Op.TERMS: + if len(obj.data) == 1: + (term, coeff), = obj.data.items() + if coeff == 1: + return Expr(Op.FACTORS, {term: 1}) + return Expr(Op.FACTORS, {term: 1, Expr.number(coeff): 1}) + if ((obj.op is Op.APPLY + and obj.data[0] is ArithOp.DIV + and not obj.data[2])): + return Expr(Op.FACTORS, {obj.data[1][0]: 1, obj.data[1][1]: -1}) + return Expr(Op.FACTORS, {obj: 1}) + raise OpError(f'cannot convert {type(obj)} to terms Expr') + + +def as_term_coeff(obj): + """Return expression as term-coefficient pair. + """ + if isinstance(obj, Expr): + obj = normalize(obj) + if obj.op is Op.INTEGER: + return as_integer(1, obj.data[1]), obj.data[0] + if obj.op is Op.REAL: + return as_real(1, obj.data[1]), obj.data[0] + if obj.op is Op.TERMS: + if len(obj.data) == 1: + (term, coeff), = obj.data.items() + return term, coeff + # TODO: find common divisor of coefficients + if obj.op is Op.APPLY and obj.data[0] is ArithOp.DIV: + t, c = as_term_coeff(obj.data[1][0]) + return as_apply(ArithOp.DIV, t, obj.data[1][1]), c + return obj, 1 + raise OpError(f'cannot convert {type(obj)} to term and coeff') + + +def as_numer_denom(obj): + """Return expression as numer-denom pair. + """ + if isinstance(obj, Expr): + obj = normalize(obj) + if obj.op in (Op.INTEGER, Op.REAL, Op.COMPLEX, Op.SYMBOL, + Op.INDEXING, Op.TERNARY): + return obj, as_number(1) + elif obj.op is Op.APPLY: + if obj.data[0] is ArithOp.DIV and not obj.data[2]: + numers, denoms = map(as_numer_denom, obj.data[1]) + return numers[0] * denoms[1], numers[1] * denoms[0] + return obj, as_number(1) + elif obj.op is Op.TERMS: + numers, denoms = [], [] + for term, coeff in obj.data.items(): + n, d = as_numer_denom(term) + n = n * coeff + numers.append(n) + denoms.append(d) + numer, denom = as_number(0), as_number(1) + for i in range(len(numers)): + n = numers[i] + for j in range(len(numers)): + if i != j: + n *= denoms[j] + numer += n + denom *= denoms[i] + if denom.op in (Op.INTEGER, Op.REAL) and denom.data[0] < 0: + numer, denom = -numer, -denom + return numer, denom + elif obj.op is Op.FACTORS: + numer, denom = as_number(1), as_number(1) + for b, e in obj.data.items(): + bnumer, bdenom = as_numer_denom(b) + if e > 0: + numer *= bnumer ** e + denom *= bdenom ** e + elif e < 0: + numer *= bdenom ** (-e) + denom *= bnumer ** (-e) + return numer, denom + raise OpError(f'cannot convert {type(obj)} to numer and denom') + + +def _counter(): + # Used internally to generate unique dummy symbols + counter = 0 + while True: + counter += 1 + yield counter + + +COUNTER = _counter() + + +def eliminate_quotes(s): + """Replace quoted substrings of input string. + + Return a new string and a mapping of replacements. + """ + d = {} + + def repl(m): + kind, value = m.groups()[:2] + if kind: + # remove trailing underscore + kind = kind[:-1] + p = {"'": "SINGLE", '"': "DOUBLE"}[value[0]] + k = f'{kind}@__f2py_QUOTES_{p}_{COUNTER.__next__()}@' + d[k] = value + return k + + new_s = re.sub(r'({kind}_|)({single_quoted}|{double_quoted})'.format( + kind=r'\w[\w\d_]*', + single_quoted=r"('([^'\\]|(\\.))*')", + double_quoted=r'("([^"\\]|(\\.))*")'), + repl, s) + + assert '"' not in new_s + assert "'" not in new_s + + return new_s, d + + +def insert_quotes(s, d): + """Inverse of eliminate_quotes. + """ + for k, v in d.items(): + kind = k[:k.find('@')] + if kind: + kind += '_' + s = s.replace(k, kind + v) + return s + + +def replace_parenthesis(s): + """Replace substrings of input that are enclosed in parenthesis. + + Return a new string and a mapping of replacements. + """ + # Find a parenthesis pair that appears first. + + # Fortran deliminator are `(`, `)`, `[`, `]`, `(/', '/)`, `/`. + # We don't handle `/` deliminator because it is not a part of an + # expression. + left, right = None, None + mn_i = len(s) + for left_, right_ in (('(/', '/)'), + '()', + '{}', # to support C literal structs + '[]'): + i = s.find(left_) + if i == -1: + continue + if i < mn_i: + mn_i = i + left, right = left_, right_ + + if left is None: + return s, {} + + i = mn_i + j = s.find(right, i) + + while s.count(left, i + 1, j) != s.count(right, i + 1, j): + j = s.find(right, j + 1) + if j == -1: + raise ValueError(f'Mismatch of {left+right} parenthesis in {s!r}') + + p = {'(': 'ROUND', '[': 'SQUARE', '{': 'CURLY', '(/': 'ROUNDDIV'}[left] + + k = f'@__f2py_PARENTHESIS_{p}_{COUNTER.__next__()}@' + v = s[i+len(left):j] + r, d = replace_parenthesis(s[j+len(right):]) + d[k] = v + return s[:i] + k + r, d + + +def _get_parenthesis_kind(s): + assert s.startswith('@__f2py_PARENTHESIS_'), s + return s.split('_')[4] + + +def unreplace_parenthesis(s, d): + """Inverse of replace_parenthesis. + """ + for k, v in d.items(): + p = _get_parenthesis_kind(k) + left = dict(ROUND='(', SQUARE='[', CURLY='{', ROUNDDIV='(/')[p] + right = dict(ROUND=')', SQUARE=']', CURLY='}', ROUNDDIV='/)')[p] + s = s.replace(k, left + v + right) + return s + + +def fromstring(s, language=Language.C): + """Create an expression from a string. + + This is a "lazy" parser, that is, only arithmetic operations are + resolved, non-arithmetic operations are treated as symbols. + """ + r = _FromStringWorker(language=language).parse(s) + if isinstance(r, Expr): + return r + raise ValueError(f'failed to parse `{s}` to Expr instance: got `{r}`') + + +class _Pair: + # Internal class to represent a pair of expressions + + def __init__(self, left, right): + self.left = left + self.right = right + + def substitute(self, symbols_map): + left, right = self.left, self.right + if isinstance(left, Expr): + left = left.substitute(symbols_map) + if isinstance(right, Expr): + right = right.substitute(symbols_map) + return _Pair(left, right) + + def __repr__(self): + return f'{type(self).__name__}({self.left}, {self.right})' + + +class _FromStringWorker: + + def __init__(self, language=Language.C): + self.original = None + self.quotes_map = None + self.language = language + + def finalize_string(self, s): + return insert_quotes(s, self.quotes_map) + + def parse(self, inp): + self.original = inp + unquoted, self.quotes_map = eliminate_quotes(inp) + return self.process(unquoted) + + def process(self, s, context='expr'): + """Parse string within the given context. + + The context may define the result in case of ambiguous + expressions. For instance, consider expressions `f(x, y)` and + `(x, y) + (a, b)` where `f` is a function and pair `(x, y)` + denotes complex number. Specifying context as "args" or + "expr", the subexpression `(x, y)` will be parse to an + argument list or to a complex number, respectively. + """ + if isinstance(s, (list, tuple)): + return type(s)(self.process(s_, context) for s_ in s) + + assert isinstance(s, str), (type(s), s) + + # replace subexpressions in parenthesis with f2py @-names + r, raw_symbols_map = replace_parenthesis(s) + r = r.strip() + + def restore(r): + # restores subexpressions marked with f2py @-names + if isinstance(r, (list, tuple)): + return type(r)(map(restore, r)) + return unreplace_parenthesis(r, raw_symbols_map) + + # comma-separated tuple + if ',' in r: + operands = restore(r.split(',')) + if context == 'args': + return tuple(self.process(operands)) + if context == 'expr': + if len(operands) == 2: + # complex number literal + return as_complex(*self.process(operands)) + raise NotImplementedError( + f'parsing comma-separated list (context={context}): {r}') + + # ternary operation + m = re.match(r'\A([^?]+)[?]([^:]+)[:](.+)\Z', r) + if m: + assert context == 'expr', context + oper, expr1, expr2 = restore(m.groups()) + oper = self.process(oper) + expr1 = self.process(expr1) + expr2 = self.process(expr2) + return as_ternary(oper, expr1, expr2) + + # relational expression + if self.language is Language.Fortran: + m = re.match( + r'\A(.+)\s*[.](eq|ne|lt|le|gt|ge)[.]\s*(.+)\Z', r, re.I) + else: + m = re.match( + r'\A(.+)\s*([=][=]|[!][=]|[<][=]|[<]|[>][=]|[>])\s*(.+)\Z', r) + if m: + left, rop, right = m.groups() + if self.language is Language.Fortran: + rop = '.' + rop + '.' + left, right = self.process(restore((left, right))) + rop = RelOp.fromstring(rop, language=self.language) + return Expr(Op.RELATIONAL, (rop, left, right)) + + # keyword argument + m = re.match(r'\A(\w[\w\d_]*)\s*[=](.*)\Z', r) + if m: + keyname, value = m.groups() + value = restore(value) + return _Pair(keyname, self.process(value)) + + # addition/subtraction operations + operands = re.split(r'((? 1: + result = self.process(restore(operands[0] or '0')) + for op, operand in zip(operands[1::2], operands[2::2]): + operand = self.process(restore(operand)) + op = op.strip() + if op == '+': + result += operand + else: + assert op == '-' + result -= operand + return result + + # string concatenate operation + if self.language is Language.Fortran and '//' in r: + operands = restore(r.split('//')) + return Expr(Op.CONCAT, + tuple(self.process(operands))) + + # multiplication/division operations + operands = re.split(r'(?<=[@\w\d_])\s*([*]|/)', + (r if self.language is Language.C + else r.replace('**', '@__f2py_DOUBLE_STAR@'))) + if len(operands) > 1: + operands = restore(operands) + if self.language is not Language.C: + operands = [operand.replace('@__f2py_DOUBLE_STAR@', '**') + for operand in operands] + # Expression is an arithmetic product + result = self.process(operands[0]) + for op, operand in zip(operands[1::2], operands[2::2]): + operand = self.process(operand) + op = op.strip() + if op == '*': + result *= operand + else: + assert op == '/' + result /= operand + return result + + # referencing/dereferencing + if r.startswith('*') or r.startswith('&'): + op = {'*': Op.DEREF, '&': Op.REF}[r[0]] + operand = self.process(restore(r[1:])) + return Expr(op, operand) + + # exponentiation operations + if self.language is not Language.C and '**' in r: + operands = list(reversed(restore(r.split('**')))) + result = self.process(operands[0]) + for operand in operands[1:]: + operand = self.process(operand) + result = operand ** result + return result + + # int-literal-constant + m = re.match(r'\A({digit_string})({kind}|)\Z'.format( + digit_string=r'\d+', + kind=r'_(\d+|\w[\w\d_]*)'), r) + if m: + value, _, kind = m.groups() + if kind and kind.isdigit(): + kind = int(kind) + return as_integer(int(value), kind or 4) + + # real-literal-constant + m = re.match(r'\A({significant}({exponent}|)|\d+{exponent})({kind}|)\Z' + .format( + significant=r'[.]\d+|\d+[.]\d*', + exponent=r'[edED][+-]?\d+', + kind=r'_(\d+|\w[\w\d_]*)'), r) + if m: + value, _, _, kind = m.groups() + if kind and kind.isdigit(): + kind = int(kind) + value = value.lower() + if 'd' in value: + return as_real(float(value.replace('d', 'e')), kind or 8) + return as_real(float(value), kind or 4) + + # string-literal-constant with kind parameter specification + if r in self.quotes_map: + kind = r[:r.find('@')] + return as_string(self.quotes_map[r], kind or 1) + + # array constructor or literal complex constant or + # parenthesized expression + if r in raw_symbols_map: + paren = _get_parenthesis_kind(r) + items = self.process(restore(raw_symbols_map[r]), + 'expr' if paren == 'ROUND' else 'args') + if paren == 'ROUND': + if isinstance(items, Expr): + return items + if paren in ['ROUNDDIV', 'SQUARE']: + # Expression is a array constructor + if isinstance(items, Expr): + items = (items,) + return as_array(items) + + # function call/indexing + m = re.match(r'\A(.+)\s*(@__f2py_PARENTHESIS_(ROUND|SQUARE)_\d+@)\Z', + r) + if m: + target, args, paren = m.groups() + target = self.process(restore(target)) + args = self.process(restore(args)[1:-1], 'args') + if not isinstance(args, tuple): + args = args, + if paren == 'ROUND': + kwargs = dict((a.left, a.right) for a in args + if isinstance(a, _Pair)) + args = tuple(a for a in args if not isinstance(a, _Pair)) + # Warning: this could also be Fortran indexing operation.. + return as_apply(target, *args, **kwargs) + else: + # Expression is a C/Python indexing operation + # (e.g. used in .pyf files) + assert paren == 'SQUARE' + return target[args] + + # Fortran standard conforming identifier + m = re.match(r'\A\w[\w\d_]*\Z', r) + if m: + return as_symbol(r) + + # fall-back to symbol + r = self.finalize_string(restore(r)) + ewarn( + f'fromstring: treating {r!r} as symbol (original={self.original})') + return as_symbol(r) diff --git 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procedure (op) add1, add2 + procedure (op), pointer::p + p=>add1 + call p(x, y, r1) + p=>add2 + call p(x, y, r2) + end subroutine +end module + +subroutine add1(x, y, z) + integer, intent(in) :: x, y + integer, intent(out) :: z + z = x + y +end subroutine + +subroutine add2(x, y, z) + integer, intent(in) :: x, y + integer, intent(out) :: z + z = x + 2 * y +end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/abstract_interface/gh18403_mod.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/abstract_interface/gh18403_mod.f90 new file mode 100644 index 0000000000000000000000000000000000000000..36791e469f5aee1d5fe15b121abeb9c62a45fadf --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/abstract_interface/gh18403_mod.f90 @@ -0,0 +1,6 @@ +module test + abstract interface + subroutine foo() + end subroutine + end interface +end module test diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/array_from_pyobj/wrapmodule.c b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/array_from_pyobj/wrapmodule.c new file mode 100644 index 0000000000000000000000000000000000000000..8c6ba1396924e03943d23ae6a014b39be20e0d73 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/array_from_pyobj/wrapmodule.c @@ -0,0 +1,230 @@ +/* + * This file was auto-generated with f2py (version:2_1330) and hand edited by + * Pearu for testing purposes. Do not edit this file unless you know what you + * are doing!!! + */ + +#ifdef __cplusplus +extern "C" { +#endif + +/*********************** See f2py2e/cfuncs.py: includes ***********************/ + +#define PY_SSIZE_T_CLEAN +#include +#include "fortranobject.h" +#include + +static PyObject *wrap_error; +static PyObject *wrap_module; + +/************************************ call ************************************/ +static char doc_f2py_rout_wrap_call[] = "\ +Function signature:\n\ + arr = call(type_num,dims,intent,obj)\n\ +Required arguments:\n" +" type_num : input int\n" +" dims : input int-sequence\n" +" intent : input int\n" +" obj : input python object\n" +"Return objects:\n" +" arr : array"; +static PyObject *f2py_rout_wrap_call(PyObject *capi_self, + PyObject *capi_args) { + PyObject * volatile capi_buildvalue = NULL; + int type_num = 0; + int elsize = 0; + npy_intp *dims = NULL; + PyObject *dims_capi = Py_None; + int rank = 0; + int intent = 0; + PyArrayObject *capi_arr_tmp = NULL; + PyObject *arr_capi = Py_None; + int i; + + if (!PyArg_ParseTuple(capi_args,"iiOiO|:wrap.call",\ + &type_num,&elsize,&dims_capi,&intent,&arr_capi)) + return NULL; + rank = PySequence_Length(dims_capi); + dims = malloc(rank*sizeof(npy_intp)); + for (i=0;ikind, + PyArray_DESCR(arr)->type, + PyArray_TYPE(arr), + PyArray_ITEMSIZE(arr), + PyDataType_ALIGNMENT(arr), + PyArray_FLAGS(arr), + PyArray_ITEMSIZE(arr)); +} + +static PyMethodDef f2py_module_methods[] = { + + {"call",f2py_rout_wrap_call,METH_VARARGS,doc_f2py_rout_wrap_call}, + {"array_attrs",f2py_rout_wrap_attrs,METH_VARARGS,doc_f2py_rout_wrap_attrs}, + {NULL,NULL} +}; + +static struct PyModuleDef moduledef = { + PyModuleDef_HEAD_INIT, + "test_array_from_pyobj_ext", + NULL, + -1, + f2py_module_methods, + NULL, + NULL, + NULL, + NULL +}; + +PyMODINIT_FUNC PyInit_test_array_from_pyobj_ext(void) { + PyObject *m,*d, *s; + m = wrap_module = PyModule_Create(&moduledef); + Py_SET_TYPE(&PyFortran_Type, &PyType_Type); + import_array(); + if (PyErr_Occurred()) + Py_FatalError("can't initialize module wrap (failed to import numpy)"); + d = PyModule_GetDict(m); + s = PyUnicode_FromString("This module 'wrap' is auto-generated with f2py (version:2_1330).\nFunctions:\n" + " arr = call(type_num,dims,intent,obj)\n" + "."); + PyDict_SetItemString(d, "__doc__", s); + wrap_error = PyErr_NewException ("wrap.error", NULL, NULL); + Py_DECREF(s); + +#define ADDCONST(NAME, CONST) \ + s = PyLong_FromLong(CONST); \ + PyDict_SetItemString(d, NAME, s); \ + Py_DECREF(s) + + ADDCONST("F2PY_INTENT_IN", F2PY_INTENT_IN); + ADDCONST("F2PY_INTENT_INOUT", F2PY_INTENT_INOUT); + ADDCONST("F2PY_INTENT_OUT", F2PY_INTENT_OUT); + ADDCONST("F2PY_INTENT_HIDE", F2PY_INTENT_HIDE); + ADDCONST("F2PY_INTENT_CACHE", F2PY_INTENT_CACHE); + ADDCONST("F2PY_INTENT_COPY", F2PY_INTENT_COPY); + ADDCONST("F2PY_INTENT_C", F2PY_INTENT_C); + ADDCONST("F2PY_OPTIONAL", F2PY_OPTIONAL); + ADDCONST("F2PY_INTENT_INPLACE", F2PY_INTENT_INPLACE); + ADDCONST("NPY_BOOL", NPY_BOOL); + ADDCONST("NPY_BYTE", NPY_BYTE); + ADDCONST("NPY_UBYTE", NPY_UBYTE); + ADDCONST("NPY_SHORT", NPY_SHORT); + ADDCONST("NPY_USHORT", NPY_USHORT); + ADDCONST("NPY_INT", NPY_INT); + ADDCONST("NPY_UINT", NPY_UINT); + ADDCONST("NPY_INTP", NPY_INTP); + ADDCONST("NPY_UINTP", NPY_UINTP); + ADDCONST("NPY_LONG", NPY_LONG); + ADDCONST("NPY_ULONG", NPY_ULONG); + ADDCONST("NPY_LONGLONG", NPY_LONGLONG); + ADDCONST("NPY_ULONGLONG", NPY_ULONGLONG); + ADDCONST("NPY_FLOAT", NPY_FLOAT); + ADDCONST("NPY_DOUBLE", NPY_DOUBLE); + ADDCONST("NPY_LONGDOUBLE", NPY_LONGDOUBLE); + ADDCONST("NPY_CFLOAT", NPY_CFLOAT); + ADDCONST("NPY_CDOUBLE", NPY_CDOUBLE); + ADDCONST("NPY_CLONGDOUBLE", NPY_CLONGDOUBLE); + ADDCONST("NPY_OBJECT", NPY_OBJECT); + ADDCONST("NPY_STRING", NPY_STRING); + ADDCONST("NPY_UNICODE", NPY_UNICODE); + ADDCONST("NPY_VOID", NPY_VOID); + ADDCONST("NPY_NTYPES_LEGACY", NPY_NTYPES_LEGACY); + ADDCONST("NPY_NOTYPE", NPY_NOTYPE); + ADDCONST("NPY_USERDEF", NPY_USERDEF); + + ADDCONST("CONTIGUOUS", NPY_ARRAY_C_CONTIGUOUS); + ADDCONST("FORTRAN", NPY_ARRAY_F_CONTIGUOUS); + ADDCONST("OWNDATA", NPY_ARRAY_OWNDATA); + ADDCONST("FORCECAST", NPY_ARRAY_FORCECAST); + ADDCONST("ENSURECOPY", NPY_ARRAY_ENSURECOPY); + ADDCONST("ENSUREARRAY", NPY_ARRAY_ENSUREARRAY); + ADDCONST("ALIGNED", NPY_ARRAY_ALIGNED); + ADDCONST("WRITEABLE", NPY_ARRAY_WRITEABLE); + ADDCONST("WRITEBACKIFCOPY", NPY_ARRAY_WRITEBACKIFCOPY); + + ADDCONST("BEHAVED", NPY_ARRAY_BEHAVED); + ADDCONST("BEHAVED_NS", NPY_ARRAY_BEHAVED_NS); + ADDCONST("CARRAY", NPY_ARRAY_CARRAY); + ADDCONST("FARRAY", NPY_ARRAY_FARRAY); + ADDCONST("CARRAY_RO", NPY_ARRAY_CARRAY_RO); + ADDCONST("FARRAY_RO", NPY_ARRAY_FARRAY_RO); + ADDCONST("DEFAULT", NPY_ARRAY_DEFAULT); + ADDCONST("UPDATE_ALL", NPY_ARRAY_UPDATE_ALL); + +#undef ADDCONST( + + if (PyErr_Occurred()) + Py_FatalError("can't initialize module wrap"); + +#ifdef F2PY_REPORT_ATEXIT + on_exit(f2py_report_on_exit,(void*)"array_from_pyobj.wrap.call"); +#endif + + return m; +} +#ifdef __cplusplus +} +#endif diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/.f2py_f2cmap b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/.f2py_f2cmap new file mode 100644 index 0000000000000000000000000000000000000000..2665f89b52d2f17ce7b0a857bea73ec5fab2df88 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/.f2py_f2cmap @@ -0,0 +1 @@ +dict(real=dict(rk="double")) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/foo_free.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/foo_free.f90 new file mode 100644 index 0000000000000000000000000000000000000000..b301710f5dda005e67e40cc21a5e0d62d0ec116a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/foo_free.f90 @@ -0,0 +1,34 @@ + +subroutine sum(x, res) + implicit none + real, intent(in) :: x(:) + real, intent(out) :: res + + integer :: i + + !print *, "sum: size(x) = ", size(x) + + res = 0.0 + + do i = 1, size(x) + res = res + x(i) + enddo + +end subroutine sum + +function fsum(x) result (res) + implicit none + real, intent(in) :: x(:) + real :: res + + integer :: i + + !print *, "fsum: size(x) = ", size(x) + + res = 0.0 + + do i = 1, size(x) + res = res + x(i) + enddo + +end function fsum diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/foo_mod.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/foo_mod.f90 new file mode 100644 index 0000000000000000000000000000000000000000..cbe6317ed8f39f8a633b058a4ab64fe1797ea7b0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/foo_mod.f90 @@ -0,0 +1,41 @@ + +module mod + +contains + +subroutine sum(x, res) + implicit none + real, intent(in) :: x(:) + real, intent(out) :: res + + integer :: i + + !print *, "sum: size(x) = ", size(x) + + res = 0.0 + + do i = 1, size(x) + res = res + x(i) + enddo + +end subroutine sum + +function fsum(x) result (res) + implicit none + real, intent(in) :: x(:) + real :: res + + integer :: i + + !print *, "fsum: size(x) = ", size(x) + + res = 0.0 + + do i = 1, size(x) + res = res + x(i) + enddo + +end function fsum + + +end module mod diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/foo_use.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/foo_use.f90 new file mode 100644 index 0000000000000000000000000000000000000000..337465ac540440fc8e8e10d23757af202e8a52a4 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/foo_use.f90 @@ -0,0 +1,19 @@ +subroutine sum_with_use(x, res) + use precision + + implicit none + + real(kind=rk), intent(in) :: x(:) + real(kind=rk), intent(out) :: res + + integer :: i + + !print *, "size(x) = ", size(x) + + res = 0.0 + + do i = 1, size(x) + res = res + x(i) + enddo + + end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/precision.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/precision.f90 new file mode 100644 index 0000000000000000000000000000000000000000..ed6c70cbbe7dadfd50b616a8cc1570939ef5afd8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/assumed_shape/precision.f90 @@ -0,0 +1,4 @@ +module precision + integer, parameter :: rk = selected_real_kind(8) + integer, parameter :: ik = selected_real_kind(4) +end module diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/block_docstring/foo.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/block_docstring/foo.f new file mode 100644 index 0000000000000000000000000000000000000000..c8315f12ce0f5cf3dbc4c965ad8843d0c10441cd --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/block_docstring/foo.f @@ -0,0 +1,6 @@ + SUBROUTINE FOO() + INTEGER BAR(2, 3) + + COMMON /BLOCK/ BAR + RETURN + END diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/foo.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/foo.f new file mode 100644 index 0000000000000000000000000000000000000000..ba397bb38133faa8d502807368074e6b296749b9 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/foo.f @@ -0,0 +1,62 @@ + subroutine t(fun,a) + integer a +cf2py intent(out) a + external fun + call fun(a) + end + + subroutine func(a) +cf2py intent(in,out) a + integer a + a = a + 11 + end + + subroutine func0(a) +cf2py intent(out) a + integer a + a = 11 + end + + subroutine t2(a) +cf2py intent(callback) fun + integer a +cf2py intent(out) a + external fun + call fun(a) + end + + subroutine string_callback(callback, a) + external callback + double precision callback + double precision a + character*1 r +cf2py intent(out) a + r = 'r' + a = callback(r) + end + + subroutine string_callback_array(callback, cu, lencu, a) + external callback + integer callback + integer lencu + character*8 cu(lencu) + integer a +cf2py intent(out) a + + a = callback(cu, lencu) + end + + subroutine hidden_callback(a, r) + external global_f +cf2py intent(callback, hide) global_f + integer a, r, global_f +cf2py intent(out) r + r = global_f(a) + end + + subroutine hidden_callback2(a, r) + external global_f + integer a, r, global_f +cf2py intent(out) r + r = global_f(a) + end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh17797.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh17797.f90 new file mode 100644 index 0000000000000000000000000000000000000000..49853afd766a90e521104081bf77236a252d3c70 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh17797.f90 @@ -0,0 +1,7 @@ +function gh17797(f, y) result(r) + external f + integer(8) :: r, f + integer(8), dimension(:) :: y + r = f(0) + r = r + sum(y) +end function gh17797 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh18335.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh18335.f90 new file mode 100644 index 0000000000000000000000000000000000000000..92b6d7540c827d20c7d2169c56f14653954d7ff9 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh18335.f90 @@ -0,0 +1,17 @@ + ! When gh18335_workaround is defined as an extension, + ! the issue cannot be reproduced. + !subroutine gh18335_workaround(f, y) + ! implicit none + ! external f + ! integer(kind=1) :: y(1) + ! call f(y) + !end subroutine gh18335_workaround + + function gh18335(f) result (r) + implicit none + external f + integer(kind=1) :: y(1), r + y(1) = 123 + call f(y) + r = y(1) + end function gh18335 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh25211.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh25211.f new file mode 100644 index 0000000000000000000000000000000000000000..ba727a10a07ebec77845f8a67746cf5d5bb3d32a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh25211.f @@ -0,0 +1,10 @@ + SUBROUTINE FOO(FUN,R) + EXTERNAL FUN + INTEGER I + REAL*8 R, FUN +Cf2py intent(out) r + R = 0D0 + DO I=-5,5 + R = R + FUN(I) + ENDDO + END diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh25211.pyf b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh25211.pyf new file mode 100644 index 0000000000000000000000000000000000000000..f12011153370b022a2686222655a12245a1eb14e --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/callback/gh25211.pyf @@ -0,0 +1,18 @@ +python module __user__routines + interface + function fun(i) result (r) + integer :: i + real*8 :: r + end function fun + end interface +end python module __user__routines + +python module callback2 + interface + subroutine foo(f,r) + use __user__routines, f=>fun + external f + real*8 intent(out) :: r + end subroutine foo + end interface +end python module callback2 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/cli/gh_22819.pyf b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/cli/gh_22819.pyf new file mode 100644 index 0000000000000000000000000000000000000000..8eb5bb106a366ec214944c19e53d9788c0596e55 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/cli/gh_22819.pyf @@ -0,0 +1,6 @@ +python module test_22819 + interface + subroutine hello() + end subroutine hello + end interface +end python module test_22819 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/cli/hi77.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/cli/hi77.f new file mode 100644 index 0000000000000000000000000000000000000000..8b916ebe0459eb812baad694aa671011a1381f8a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/cli/hi77.f @@ -0,0 +1,3 @@ + SUBROUTINE HI + PRINT*, "HELLO WORLD" + END SUBROUTINE diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/cli/hiworld.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/cli/hiworld.f90 new file mode 100644 index 0000000000000000000000000000000000000000..981f877547a4caec513a15dea1401bbc98ce3f23 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/cli/hiworld.f90 @@ -0,0 +1,3 @@ +function hi() + print*, "Hello World" +end function diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/common/block.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/common/block.f new file mode 100644 index 0000000000000000000000000000000000000000..7ea7968fe935182bd17a697b316569546937b715 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/common/block.f @@ -0,0 +1,11 @@ + SUBROUTINE INITCB + DOUBLE PRECISION LONG + CHARACTER STRING + INTEGER OK + + COMMON /BLOCK/ LONG, STRING, OK + LONG = 1.0 + STRING = '2' + OK = 3 + RETURN + END diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/common/gh19161.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/common/gh19161.f90 new file mode 100644 index 0000000000000000000000000000000000000000..a2f40735ad66a3cb70cfc10a3938882c77ff54ea --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/common/gh19161.f90 @@ -0,0 +1,10 @@ +module typedefmod + use iso_fortran_env, only: real32 +end module typedefmod + +module data + use typedefmod, only: real32 + implicit none + real(kind=real32) :: x + common/test/x +end module data diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/accesstype.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/accesstype.f90 new file mode 100644 index 0000000000000000000000000000000000000000..e2cbd445daf57f21e2d727f42a3891ec28725175 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/accesstype.f90 @@ -0,0 +1,13 @@ +module foo + public + type, private, bind(c) :: a + integer :: i + end type a + type, bind(c) :: b_ + integer :: j + end type b_ + public :: b_ + type :: c + integer :: k + end type c +end module foo diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_common.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_common.f new file mode 100644 index 0000000000000000000000000000000000000000..5ffd865c837997f8aae2d8faebfd519df61d8cd2 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_common.f @@ -0,0 +1,8 @@ + BLOCK DATA PARAM_INI + COMMON /MYCOM/ MYDATA + DATA MYDATA /0/ + END + SUBROUTINE SUB1 + COMMON /MYCOM/ MYDATA + MYDATA = MYDATA + 1 + END diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_multiplier.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_multiplier.f new file mode 100644 index 0000000000000000000000000000000000000000..19ff8a83e97b7a1fa9ef82a2f4d5241ec422cb01 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_multiplier.f @@ -0,0 +1,5 @@ + BLOCK DATA MYBLK + IMPLICIT DOUBLE PRECISION (A-H,O-Z) + COMMON /MYCOM/ IVAR1, IVAR2, IVAR3, IVAR4, EVAR5 + DATA IVAR1, IVAR2, IVAR3, IVAR4, EVAR5 /2*3,2*2,0.0D0/ + END diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_stmts.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_stmts.f90 new file mode 100644 index 0000000000000000000000000000000000000000..576c5e485baf209aea79f566fc09cb20138a0a25 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_stmts.f90 @@ -0,0 +1,20 @@ +! gh-23276 +module cmplxdat + implicit none + integer :: i, j + real :: x, y + real, dimension(2) :: z + real(kind=8) :: pi + complex(kind=8), target :: medium_ref_index + complex(kind=8), target :: ref_index_one, ref_index_two + complex(kind=8), dimension(2) :: my_array + real(kind=8), dimension(3) :: my_real_array = (/1.0d0, 2.0d0, 3.0d0/) + + data i, j / 2, 3 / + data x, y / 1.5, 2.0 / + data z / 3.5, 7.0 / + data medium_ref_index / (1.d0, 0.d0) / + data ref_index_one, ref_index_two / (13.0d0, 21.0d0), (-30.0d0, 43.0d0) / + data my_array / (1.0d0, 2.0d0), (-3.0d0, 4.0d0) / + data pi / 3.1415926535897932384626433832795028841971693993751058209749445923078164062d0 / +end module cmplxdat diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_with_comments.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_with_comments.f new file mode 100644 index 0000000000000000000000000000000000000000..4128f004e840087ab8e08a06c76995b249a561b0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/data_with_comments.f @@ -0,0 +1,8 @@ + BLOCK DATA PARAM_INI + COMMON /MYCOM/ MYTAB + INTEGER MYTAB(3) + DATA MYTAB/ + * 0, ! 1 and more commenty stuff + * 4, ! 2 + * 0 / + END diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/foo_deps.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/foo_deps.f90 new file mode 100644 index 0000000000000000000000000000000000000000..e327b25c81986b2191fc740991ca9e907b5b0fb6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/foo_deps.f90 @@ -0,0 +1,6 @@ +module foo + type bar + character(len = 4) :: text + end type bar + type(bar), parameter :: abar = bar('abar') +end module foo diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh15035.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh15035.f new file mode 100644 index 0000000000000000000000000000000000000000..1bb2e6745952cb10067116e9ae3337c8314061ee --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh15035.f @@ -0,0 +1,16 @@ + subroutine subb(k) + real(8), intent(inout) :: k(:) + k=k+1 + endsubroutine + + subroutine subc(w,k) + real(8), intent(in) :: w(:) + real(8), intent(out) :: k(size(w)) + k=w+1 + endsubroutine + + function t0(value) + character value + character t0 + t0 = value + endfunction diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh17859.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh17859.f new file mode 100644 index 0000000000000000000000000000000000000000..995953845c5eb1b4fa2bdf70c18e0296d38e5252 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh17859.f @@ -0,0 +1,12 @@ + integer(8) function external_as_statement(fcn) + implicit none + external fcn + integer(8) :: fcn + external_as_statement = fcn(0) + end + + integer(8) function external_as_attribute(fcn) + implicit none + integer(8), external :: fcn + external_as_attribute = fcn(0) + end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh22648.pyf b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh22648.pyf new file mode 100644 index 0000000000000000000000000000000000000000..b3454f18635fc8fe2b8ea5d15f85a9d77af9a22b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh22648.pyf @@ -0,0 +1,7 @@ +python module iri16py ! in + interface ! in :iri16py + block data ! in :iri16py:iridreg_modified.for + COMMON /fircom/ eden,tabhe,tabla,tabmo,tabza,tabfl + end block data + end interface +end python module iri16py diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23533.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23533.f new file mode 100644 index 0000000000000000000000000000000000000000..db522afa7d2fdd09e26f2d02a649a659d9ed7d60 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23533.f @@ -0,0 +1,5 @@ + SUBROUTINE EXAMPLE( ) + IF( .TRUE. ) THEN + CALL DO_SOMETHING() + END IF ! ** .TRUE. ** + END diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23598.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23598.f90 new file mode 100644 index 0000000000000000000000000000000000000000..e0dffb5ef29e3d5ba853ff4dfeda57b2bed6a9dc --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23598.f90 @@ -0,0 +1,4 @@ +integer function intproduct(a, b) result(res) + integer, intent(in) :: a, b + res = a*b +end function diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23598Warn.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23598Warn.f90 new file mode 100644 index 0000000000000000000000000000000000000000..3b44efc5ef16e9f7e1105229371ae48ecc069ee5 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23598Warn.f90 @@ -0,0 +1,11 @@ +module test_bug + implicit none + private + public :: intproduct + +contains + integer function intproduct(a, b) result(res) + integer, intent(in) :: a, b + res = a*b + end function +end module diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23879.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23879.f90 new file mode 100644 index 0000000000000000000000000000000000000000..fac262d53c9d3f0f3a5ba1138594f5b694b95717 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh23879.f90 @@ -0,0 +1,20 @@ +module gh23879 + implicit none + private + public :: foo + + contains + + subroutine foo(a, b) + integer, intent(in) :: a + integer, intent(out) :: b + b = a + call bar(b) + end subroutine + + subroutine bar(x) + integer, intent(inout) :: x + x = 2*x + end subroutine + + end module gh23879 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh2848.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh2848.f90 new file mode 100644 index 0000000000000000000000000000000000000000..31ea9327a4d9134011cfc668cc88961968756d77 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/gh2848.f90 @@ -0,0 +1,13 @@ + subroutine gh2848( & + ! first 2 parameters + par1, par2,& + ! last 2 parameters + par3, par4) + + integer, intent(in) :: par1, par2 + integer, intent(out) :: par3, par4 + + par3 = par1 + par4 = par2 + + end subroutine gh2848 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/operators.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/operators.f90 new file mode 100644 index 0000000000000000000000000000000000000000..1d060a3d2bd5abd12732e6003cec53f36baeba7c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/operators.f90 @@ -0,0 +1,49 @@ +module foo + type bar + character(len = 32) :: item + end type bar + interface operator(.item.) + module procedure item_int, item_real + end interface operator(.item.) + interface operator(==) + module procedure items_are_equal + end interface operator(==) + interface assignment(=) + module procedure get_int, get_real + end interface assignment(=) +contains + function item_int(val) result(elem) + integer, intent(in) :: val + type(bar) :: elem + + write(elem%item, "(I32)") val + end function item_int + + function item_real(val) result(elem) + real, intent(in) :: val + type(bar) :: elem + + write(elem%item, "(1PE32.12)") val + end function item_real + + function items_are_equal(val1, val2) result(equal) + type(bar), intent(in) :: val1, val2 + logical :: equal + + equal = (val1%item == val2%item) + end function items_are_equal + + subroutine get_real(rval, item) + real, intent(out) :: rval + type(bar), intent(in) :: item + + read(item%item, *) rval + end subroutine get_real + + subroutine get_int(rval, item) + integer, intent(out) :: rval + type(bar), intent(in) :: item + + read(item%item, *) rval + end subroutine get_int +end module foo diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/privatemod.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/privatemod.f90 new file mode 100644 index 0000000000000000000000000000000000000000..2674c214767b33663e51ee1d32ad7a1792c92680 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/privatemod.f90 @@ -0,0 +1,11 @@ +module foo + private + integer :: a + public :: setA + integer :: b +contains + subroutine setA(v) + integer, intent(in) :: v + a = v + end subroutine setA +end module foo diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/publicmod.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/publicmod.f90 new file mode 100644 index 0000000000000000000000000000000000000000..1db76e3fe06828ba0d1b640720ec70422cde6872 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/publicmod.f90 @@ -0,0 +1,10 @@ +module foo + public + integer, private :: a + public :: setA +contains + subroutine setA(v) + integer, intent(in) :: v + a = v + end subroutine setA +end module foo diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/pubprivmod.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/pubprivmod.f90 new file mode 100644 index 0000000000000000000000000000000000000000..46bef7cb91122281ddac7d0f0474c2c01b2a5e6f --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/pubprivmod.f90 @@ -0,0 +1,10 @@ +module foo + public + integer, private :: a + integer :: b +contains + subroutine setA(v) + integer, intent(in) :: v + a = v + end subroutine setA +end module foo diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/unicode_comment.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/unicode_comment.f90 new file mode 100644 index 0000000000000000000000000000000000000000..13515ce98c50e88a03004161fb135e8502005a82 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/crackfortran/unicode_comment.f90 @@ -0,0 +1,4 @@ +subroutine foo(x) + real(8), intent(in) :: x + ! Écrit à l'écran la valeur de x +end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/f2cmap/.f2py_f2cmap b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/f2cmap/.f2py_f2cmap new file mode 100644 index 0000000000000000000000000000000000000000..a4425f8876f5b7ec9c72a11862a8cd4574d33ea8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/f2cmap/.f2py_f2cmap @@ -0,0 +1 @@ +dict(real=dict(real32='float', real64='double'), integer=dict(int64='long_long')) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/f2cmap/isoFortranEnvMap.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/f2cmap/isoFortranEnvMap.f90 new file mode 100644 index 0000000000000000000000000000000000000000..1e1dc1d4054b36d2b2d9104e8d6ab708361bfbe8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/f2cmap/isoFortranEnvMap.f90 @@ -0,0 +1,9 @@ + subroutine func1(n, x, res) + use, intrinsic :: iso_fortran_env, only: int64, real64 + implicit none + integer(int64), intent(in) :: n + real(real64), intent(in) :: x(n) + real(real64), intent(out) :: res +!f2py intent(hide) :: n + res = sum(x) + end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/isocintrin/isoCtests.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/isocintrin/isoCtests.f90 new file mode 100644 index 0000000000000000000000000000000000000000..765f7c1ce6608a0c8588b6c20edd052e2d3e07bf --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/isocintrin/isoCtests.f90 @@ -0,0 +1,34 @@ + module coddity + use iso_c_binding, only: c_double, c_int, c_int64_t + implicit none + contains + subroutine c_add(a, b, c) bind(c, name="c_add") + real(c_double), intent(in) :: a, b + real(c_double), intent(out) :: c + c = a + b + end subroutine c_add + ! gh-9693 + function wat(x, y) result(z) bind(c) + integer(c_int), intent(in) :: x, y + integer(c_int) :: z + + z = x + 7 + end function wat + ! gh-25207 + subroutine c_add_int64(a, b, c) bind(c) + integer(c_int64_t), intent(in) :: a, b + integer(c_int64_t), intent(out) :: c + c = a + b + end subroutine c_add_int64 + ! gh-25207 + subroutine add_arr(A, B, C) + integer(c_int64_t), intent(in) :: A(3) + integer(c_int64_t), intent(in) :: B(3) + integer(c_int64_t), intent(out) :: C(3) + integer :: j + + do j = 1, 3 + C(j) = A(j)+B(j) + end do + end subroutine + end module coddity diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/kind/foo.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/kind/foo.f90 new file mode 100644 index 0000000000000000000000000000000000000000..d3d15cfb20a15004ed86e45dc91792d1c089033a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/kind/foo.f90 @@ -0,0 +1,20 @@ + + +subroutine selectedrealkind(p, r, res) + implicit none + + integer, intent(in) :: p, r + !f2py integer :: r=0 + integer, intent(out) :: res + res = selected_real_kind(p, r) + +end subroutine + +subroutine selectedintkind(p, res) + implicit none + + integer, intent(in) :: p + integer, intent(out) :: res + res = selected_int_kind(p) + +end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/mixed/foo.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/mixed/foo.f new file mode 100644 index 0000000000000000000000000000000000000000..c34742578f8551729fdc3474d86e92c87e2868d2 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/mixed/foo.f @@ -0,0 +1,5 @@ + subroutine bar11(a) +cf2py intent(out) a + integer a + a = 11 + end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/mixed/foo_fixed.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/mixed/foo_fixed.f90 new file mode 100644 index 0000000000000000000000000000000000000000..7543a6acb7375872388cb9f2ced109db5faa17b0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/mixed/foo_fixed.f90 @@ -0,0 +1,8 @@ + module foo_fixed + contains + subroutine bar12(a) +!f2py intent(out) a + integer a + a = 12 + end subroutine bar12 + end module foo_fixed diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/mixed/foo_free.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/mixed/foo_free.f90 new file mode 100644 index 0000000000000000000000000000000000000000..c1b641f13ec2943b9dd23ba85beecda738b51825 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/mixed/foo_free.f90 @@ -0,0 +1,8 @@ +module foo_free +contains + subroutine bar13(a) + !f2py intent(out) a + integer a + a = 13 + end subroutine bar13 +end module foo_free diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/gh25337/data.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/gh25337/data.f90 new file mode 100644 index 0000000000000000000000000000000000000000..483d13ceb95c08bf38b74d8218932fc109792b09 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/gh25337/data.f90 @@ -0,0 +1,8 @@ +module data + real(8) :: shift +contains + subroutine set_shift(in_shift) + real(8), intent(in) :: in_shift + shift = in_shift + end subroutine set_shift +end module data diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/gh25337/use_data.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/gh25337/use_data.f90 new file mode 100644 index 0000000000000000000000000000000000000000..b3fae8b875d03d75199f4cf06d544edb4aab1a89 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/gh25337/use_data.f90 @@ -0,0 +1,6 @@ +subroutine shift_a(dim_a, a) + use data, only: shift + integer, intent(in) :: dim_a + real(8), intent(inout), dimension(dim_a) :: a + a = a + shift +end subroutine shift_a diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/module_data_docstring.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/module_data_docstring.f90 new file mode 100644 index 0000000000000000000000000000000000000000..4505e0cbc31e50a75df94b30cd53cf923659379d --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/module_data_docstring.f90 @@ -0,0 +1,12 @@ +module mod + integer :: i + integer :: x(4) + real, dimension(2,3) :: a + real, allocatable, dimension(:,:) :: b +contains + subroutine foo + integer :: k + k = 1 + a(1,2) = a(1,2)+3 + end subroutine foo +end module mod diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/use_modules.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/use_modules.f90 new file mode 100644 index 0000000000000000000000000000000000000000..aa40c86ca39d1dbcfacca9dcb2addbc6ede73140 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/modules/use_modules.f90 @@ -0,0 +1,20 @@ +module mathops + implicit none +contains + function add(a, b) result(c) + integer, intent(in) :: a, b + integer :: c + c = a + b + end function add +end module mathops + +module useops + use mathops, only: add + implicit none +contains + function sum_and_double(a, b) result(d) + integer, intent(in) :: a, b + integer :: d + d = 2 * add(a, b) + end function sum_and_double +end module useops diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/negative_bounds/issue_20853.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/negative_bounds/issue_20853.f90 new file mode 100644 index 0000000000000000000000000000000000000000..bf1fa92853316cc31f825c024855088f42577a1c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/negative_bounds/issue_20853.f90 @@ -0,0 +1,7 @@ +subroutine foo(is_, ie_, arr, tout) + implicit none + integer :: is_,ie_ + real, intent(in) :: arr(is_:ie_) + real, intent(out) :: tout(is_:ie_) + tout = arr +end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_array.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_array.f90 new file mode 100644 index 0000000000000000000000000000000000000000..9a6bf81610d41cf5f480d6e3c25fd7ab4cf5bfff --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_array.f90 @@ -0,0 +1,45 @@ +! Check that parameter arrays are correctly intercepted. +subroutine foo_array(x, y, z) + implicit none + integer, parameter :: dp = selected_real_kind(15) + integer, parameter :: pa = 2 + integer, parameter :: intparamarray(2) = (/ 3, 5 /) + integer, dimension(pa), parameter :: pb = (/ 2, 10 /) + integer, parameter, dimension(intparamarray(1)) :: pc = (/ 2, 10, 20 /) + real(dp), parameter :: doubleparamarray(3) = (/ 3.14_dp, 4._dp, 6.44_dp /) + real(dp), intent(inout) :: x(intparamarray(1)) + real(dp), intent(inout) :: y(intparamarray(2)) + real(dp), intent(out) :: z + + x = x/pb(2) + y = y*pc(2) + z = doubleparamarray(1)*doubleparamarray(2) + doubleparamarray(3) + + return +end subroutine + +subroutine foo_array_any_index(x, y) + implicit none + integer, parameter :: dp = selected_real_kind(15) + integer, parameter, dimension(-1:1) :: myparamarray = (/ 6, 3, 1 /) + integer, parameter, dimension(2) :: nested = (/ 2, 0 /) + integer, parameter :: dim = 2 + real(dp), intent(in) :: x(myparamarray(-1)) + real(dp), intent(out) :: y(nested(1), myparamarray(nested(dim))) + + y = reshape(x, (/nested(1), myparamarray(nested(2))/)) + + return +end subroutine + +subroutine foo_array_delims(x) + implicit none + integer, parameter :: dp = selected_real_kind(15) + integer, parameter, dimension(2) :: myparamarray = (/ (6), 1 /) + integer, parameter, dimension(3) :: test = (/2, 1, (3)/) + real(dp), intent(out) :: x + + x = myparamarray(1)+test(3) + + return +end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_both.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_both.f90 new file mode 100644 index 0000000000000000000000000000000000000000..ac90cedc525a6172a9b72f3bc76f57b79d641b6c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_both.f90 @@ -0,0 +1,57 @@ +! Check that parameters are correct intercepted. +! Constants with comma separations are commonly +! used, for instance Pi = 3._dp +subroutine foo(x) + implicit none + integer, parameter :: sp = selected_real_kind(6) + integer, parameter :: dp = selected_real_kind(15) + integer, parameter :: ii = selected_int_kind(9) + integer, parameter :: il = selected_int_kind(18) + real(dp), intent(inout) :: x + dimension x(3) + real(sp), parameter :: three_s = 3._sp + real(dp), parameter :: three_d = 3._dp + integer(ii), parameter :: three_i = 3_ii + integer(il), parameter :: three_l = 3_il + x(1) = x(1) + x(2) * three_s * three_i + x(3) * three_d * three_l + x(2) = x(2) * three_s + x(3) = x(3) * three_l + return +end subroutine + + +subroutine foo_no(x) + implicit none + integer, parameter :: sp = selected_real_kind(6) + integer, parameter :: dp = selected_real_kind(15) + integer, parameter :: ii = selected_int_kind(9) + integer, parameter :: il = selected_int_kind(18) + real(dp), intent(inout) :: x + dimension x(3) + real(sp), parameter :: three_s = 3. + real(dp), parameter :: three_d = 3. + integer(ii), parameter :: three_i = 3 + integer(il), parameter :: three_l = 3 + x(1) = x(1) + x(2) * three_s * three_i + x(3) * three_d * three_l + x(2) = x(2) * three_s + x(3) = x(3) * three_l + return +end subroutine + +subroutine foo_sum(x) + implicit none + integer, parameter :: sp = selected_real_kind(6) + integer, parameter :: dp = selected_real_kind(15) + integer, parameter :: ii = selected_int_kind(9) + integer, parameter :: il = selected_int_kind(18) + real(dp), intent(inout) :: x + dimension x(3) + real(sp), parameter :: three_s = 2._sp + 1._sp + real(dp), parameter :: three_d = 1._dp + 2._dp + integer(ii), parameter :: three_i = 2_ii + 1_ii + integer(il), parameter :: three_l = 1_il + 2_il + x(1) = x(1) + x(2) * three_s * three_i + x(3) * three_d * three_l + x(2) = x(2) * three_s + x(3) = x(3) * three_l + return +end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_compound.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_compound.f90 new file mode 100644 index 0000000000000000000000000000000000000000..e51f5e9b2fb166a6b7d9cba57af03617024b7f2a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_compound.f90 @@ -0,0 +1,15 @@ +! Check that parameters are correct intercepted. +! Constants with comma separations are commonly +! used, for instance Pi = 3._dp +subroutine foo_compound_int(x) + implicit none + integer, parameter :: ii = selected_int_kind(9) + integer(ii), intent(inout) :: x + dimension x(3) + integer(ii), parameter :: three = 3_ii + integer(ii), parameter :: two = 2_ii + integer(ii), parameter :: six = three * 1_ii * two + + x(1) = x(1) + x(2) + x(3) * six + return +end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_integer.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_integer.f90 new file mode 100644 index 0000000000000000000000000000000000000000..aaa83d2eb241274231130b6243ca2c970b5664e0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_integer.f90 @@ -0,0 +1,22 @@ +! Check that parameters are correct intercepted. +! Constants with comma separations are commonly +! used, for instance Pi = 3._dp +subroutine foo_int(x) + implicit none + integer, parameter :: ii = selected_int_kind(9) + integer(ii), intent(inout) :: x + dimension x(3) + integer(ii), parameter :: three = 3_ii + x(1) = x(1) + x(2) + x(3) * three + return +end subroutine + +subroutine foo_long(x) + implicit none + integer, parameter :: ii = selected_int_kind(18) + integer(ii), intent(inout) :: x + dimension x(3) + integer(ii), parameter :: three = 3_ii + x(1) = x(1) + x(2) + x(3) * three + return +end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_non_compound.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_non_compound.f90 new file mode 100644 index 0000000000000000000000000000000000000000..62c9a5b943cb768c9270a04d1dbf36d526a4e6e8 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_non_compound.f90 @@ -0,0 +1,23 @@ +! Check that parameters are correct intercepted. +! Specifically that types of constants without +! compound kind specs are correctly inferred +! adapted Gibbs iteration code from pymc +! for this test case +subroutine foo_non_compound_int(x) + implicit none + integer, parameter :: ii = selected_int_kind(9) + + integer(ii) maxiterates + parameter (maxiterates=2) + + integer(ii) maxseries + parameter (maxseries=2) + + integer(ii) wasize + parameter (wasize=maxiterates*maxseries) + integer(ii), intent(inout) :: x + dimension x(wasize) + + x(1) = x(1) + x(2) + x(3) + x(4) * wasize + return +end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_real.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_real.f90 new file mode 100644 index 0000000000000000000000000000000000000000..02ac9dd993b39dbb69a233ed1f0d031f15f84639 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/parameter/constant_real.f90 @@ -0,0 +1,23 @@ +! Check that parameters are correct intercepted. +! Constants with comma separations are commonly +! used, for instance Pi = 3._dp +subroutine foo_single(x) + implicit none + integer, parameter :: rp = selected_real_kind(6) + real(rp), intent(inout) :: x + dimension x(3) + real(rp), parameter :: three = 3._rp + x(1) = x(1) + x(2) + x(3) * three + return +end subroutine + +subroutine foo_double(x) + implicit none + integer, parameter :: rp = selected_real_kind(15) + real(rp), intent(inout) :: x + dimension x(3) + real(rp), parameter :: three = 3._rp + x(1) = x(1) + x(2) + x(3) * three + return +end subroutine + diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/quoted_character/foo.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/quoted_character/foo.f new file mode 100644 index 0000000000000000000000000000000000000000..9dc1cfa4446d8c05c0fc0bb1c69360a687d003c3 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/quoted_character/foo.f @@ -0,0 +1,14 @@ + SUBROUTINE FOO(OUT1, OUT2, OUT3, OUT4, OUT5, OUT6) + CHARACTER SINGLE, DOUBLE, SEMICOL, EXCLA, OPENPAR, CLOSEPAR + PARAMETER (SINGLE="'", DOUBLE='"', SEMICOL=';', EXCLA="!", + 1 OPENPAR="(", CLOSEPAR=")") + CHARACTER OUT1, OUT2, OUT3, OUT4, OUT5, OUT6 +Cf2py intent(out) OUT1, OUT2, OUT3, OUT4, OUT5, OUT6 + OUT1 = SINGLE + OUT2 = DOUBLE + OUT3 = SEMICOL + OUT4 = EXCLA + OUT5 = OPENPAR + OUT6 = CLOSEPAR + RETURN + END diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/AB.inc b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/AB.inc new file mode 100644 index 0000000000000000000000000000000000000000..8a02f631f43a15f17f65280d651aa46e9cdb7510 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/AB.inc @@ -0,0 +1 @@ +real(8) b, n, m diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f77comments.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f77comments.f new file mode 100644 index 0000000000000000000000000000000000000000..452a01a14439b1e7a9a731a31d7f720992826698 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f77comments.f @@ -0,0 +1,26 @@ + SUBROUTINE TESTSUB( + & INPUT1, INPUT2, !Input + & OUTPUT1, OUTPUT2) !Output + + IMPLICIT NONE + INTEGER, INTENT(IN) :: INPUT1, INPUT2 + INTEGER, INTENT(OUT) :: OUTPUT1, OUTPUT2 + + OUTPUT1 = INPUT1 + INPUT2 + OUTPUT2 = INPUT1 * INPUT2 + + RETURN + END SUBROUTINE TESTSUB + + SUBROUTINE TESTSUB2(OUTPUT) + IMPLICIT NONE + INTEGER, PARAMETER :: N = 10 ! Array dimension + REAL, INTENT(OUT) :: OUTPUT(N) + INTEGER :: I + + DO I = 1, N + OUTPUT(I) = I * 2.0 + END DO + + RETURN + END diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f77fixedform.f95 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f77fixedform.f95 new file mode 100644 index 0000000000000000000000000000000000000000..e47a13f7e851969f30aa38344377c5ec90708839 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f77fixedform.f95 @@ -0,0 +1,5 @@ +C This is an invalid file, but it does compile with -ffixed-form + subroutine mwe( + & x) + real x + end subroutine mwe diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f90continuation.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f90continuation.f90 new file mode 100644 index 0000000000000000000000000000000000000000..879e716bbec69e94a28745ecc0d8f9c7a8ea02eb --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/f90continuation.f90 @@ -0,0 +1,9 @@ +SUBROUTINE TESTSUB(INPUT1, & ! Hello +! commenty +INPUT2, OUTPUT1, OUTPUT2) ! more comments + INTEGER, INTENT(IN) :: INPUT1, INPUT2 + INTEGER, INTENT(OUT) :: OUTPUT1, OUTPUT2 + OUTPUT1 = INPUT1 + & + INPUT2 + OUTPUT2 = INPUT1 * INPUT2 +END SUBROUTINE TESTSUB diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/incfile.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/incfile.f90 new file mode 100644 index 0000000000000000000000000000000000000000..276ef3a67352b29d37985529ad550b45f68456f0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/incfile.f90 @@ -0,0 +1,5 @@ +function add(n,m) result(b) + implicit none + include 'AB.inc' + b = n + m +end function add diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/inout.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/inout.f90 new file mode 100644 index 0000000000000000000000000000000000000000..80cdad90cec56de2226979fa0c9b0f9dfa39c7c9 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/regression/inout.f90 @@ -0,0 +1,9 @@ +! Check that intent(in out) translates as intent(inout). +! The separation seems to be a common usage. + subroutine foo(x) + implicit none + real(4), intent(in out) :: x + dimension x(3) + x(1) = x(1) + x(2) + x(3) + return + end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_character/foo77.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_character/foo77.f new file mode 100644 index 0000000000000000000000000000000000000000..facae1016a39010cca10929837d0a95c44376e21 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_character/foo77.f @@ -0,0 +1,45 @@ + function t0(value) + character value + character t0 + t0 = value + end + function t1(value) + character*1 value + character*1 t1 + t1 = value + end + function t5(value) + character*5 value + character*5 t5 + t5 = value + end + function ts(value) + character*(*) value + character*(*) ts + ts = value + end + + subroutine s0(t0,value) + character value + character t0 +cf2py intent(out) t0 + t0 = value + end + subroutine s1(t1,value) + character*1 value + character*1 t1 +cf2py intent(out) t1 + t1 = value + end + subroutine s5(t5,value) + character*5 value + character*5 t5 +cf2py intent(out) t5 + t5 = value + end + subroutine ss(ts,value) + character*(*) value + character*10 ts +cf2py intent(out) ts + ts = value + end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_character/foo90.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_character/foo90.f90 new file mode 100644 index 0000000000000000000000000000000000000000..36182bcf2dd71649130f5afe7ef665ac80d64af9 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_character/foo90.f90 @@ -0,0 +1,48 @@ +module f90_return_char + contains + function t0(value) + character :: value + character :: t0 + t0 = value + end function t0 + function t1(value) + character(len=1) :: value + character(len=1) :: t1 + t1 = value + end function t1 + function t5(value) + character(len=5) :: value + character(len=5) :: t5 + t5 = value + end function t5 + function ts(value) + character(len=*) :: value + character(len=10) :: ts + ts = value + end function ts + + subroutine s0(t0,value) + character :: value + character :: t0 +!f2py intent(out) t0 + t0 = value + end subroutine s0 + subroutine s1(t1,value) + character(len=1) :: value + character(len=1) :: t1 +!f2py intent(out) t1 + t1 = value + end subroutine s1 + subroutine s5(t5,value) + character(len=5) :: value + character(len=5) :: t5 +!f2py intent(out) t5 + t5 = value + end subroutine s5 + subroutine ss(ts,value) + character(len=*) :: value + character(len=10) :: ts +!f2py intent(out) ts + ts = value + end subroutine ss +end module f90_return_char diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_complex/foo77.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_complex/foo77.f new file mode 100644 index 0000000000000000000000000000000000000000..37a1ec845ecacc7fbc228f1ee5f628ec73075c12 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_complex/foo77.f @@ -0,0 +1,45 @@ + function t0(value) + complex value + complex t0 + t0 = value + end + function t8(value) + complex*8 value + complex*8 t8 + t8 = value + end + function t16(value) + complex*16 value + complex*16 t16 + t16 = value + end + function td(value) + double complex value + double complex td + td = value + end + + subroutine s0(t0,value) + complex value + complex t0 +cf2py intent(out) t0 + t0 = value + end + subroutine s8(t8,value) + complex*8 value + complex*8 t8 +cf2py intent(out) t8 + t8 = value + end + subroutine s16(t16,value) + complex*16 value + complex*16 t16 +cf2py intent(out) t16 + t16 = value + end + subroutine sd(td,value) + double complex value + double complex td +cf2py intent(out) td + td = value + end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_complex/foo90.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_complex/foo90.f90 new file mode 100644 index 0000000000000000000000000000000000000000..adc27b470538bc663416fb512a29c4b2bbe8d3dd --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_complex/foo90.f90 @@ -0,0 +1,48 @@ +module f90_return_complex + contains + function t0(value) + complex :: value + complex :: t0 + t0 = value + end function t0 + function t8(value) + complex(kind=4) :: value + complex(kind=4) :: t8 + t8 = value + end function t8 + function t16(value) + complex(kind=8) :: value + complex(kind=8) :: t16 + t16 = value + end function t16 + function td(value) + double complex :: value + double complex :: td + td = value + end function td + + subroutine s0(t0,value) + complex :: value + complex :: t0 +!f2py intent(out) t0 + t0 = value + end subroutine s0 + subroutine s8(t8,value) + complex(kind=4) :: value + complex(kind=4) :: t8 +!f2py intent(out) t8 + t8 = value + end subroutine s8 + subroutine s16(t16,value) + complex(kind=8) :: value + complex(kind=8) :: t16 +!f2py intent(out) t16 + t16 = value + end subroutine s16 + subroutine sd(td,value) + double complex :: value + double complex :: td +!f2py intent(out) td + td = value + end subroutine sd +end module f90_return_complex diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_integer/foo77.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_integer/foo77.f new file mode 100644 index 0000000000000000000000000000000000000000..1ab895b9ac340ca91c5d3a4080334bab9f033a55 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_integer/foo77.f @@ -0,0 +1,56 @@ + function t0(value) + integer value + integer t0 + t0 = value + end + function t1(value) + integer*1 value + integer*1 t1 + t1 = value + end + function t2(value) + integer*2 value + integer*2 t2 + t2 = value + end + function t4(value) + integer*4 value + integer*4 t4 + t4 = value + end + function t8(value) + integer*8 value + integer*8 t8 + t8 = value + end + + subroutine s0(t0,value) + integer value + integer t0 +cf2py intent(out) t0 + t0 = value + end + subroutine s1(t1,value) + integer*1 value + integer*1 t1 +cf2py intent(out) t1 + t1 = value + end + subroutine s2(t2,value) + integer*2 value + integer*2 t2 +cf2py intent(out) t2 + t2 = value + end + subroutine s4(t4,value) + integer*4 value + integer*4 t4 +cf2py intent(out) t4 + t4 = value + end + subroutine s8(t8,value) + integer*8 value + integer*8 t8 +cf2py intent(out) t8 + t8 = value + end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_integer/foo90.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_integer/foo90.f90 new file mode 100644 index 0000000000000000000000000000000000000000..ba9249aa20f941dbf00f060ad5d7e8820745b0f4 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_integer/foo90.f90 @@ -0,0 +1,59 @@ +module f90_return_integer + contains + function t0(value) + integer :: value + integer :: t0 + t0 = value + end function t0 + function t1(value) + integer(kind=1) :: value + integer(kind=1) :: t1 + t1 = value + end function t1 + function t2(value) + integer(kind=2) :: value + integer(kind=2) :: t2 + t2 = value + end function t2 + function t4(value) + integer(kind=4) :: value + integer(kind=4) :: t4 + t4 = value + end function t4 + function t8(value) + integer(kind=8) :: value + integer(kind=8) :: t8 + t8 = value + end function t8 + + subroutine s0(t0,value) + integer :: value + integer :: t0 +!f2py intent(out) t0 + t0 = value + end subroutine s0 + subroutine s1(t1,value) + integer(kind=1) :: value + integer(kind=1) :: t1 +!f2py intent(out) t1 + t1 = value + end subroutine s1 + subroutine s2(t2,value) + integer(kind=2) :: value + integer(kind=2) :: t2 +!f2py intent(out) t2 + t2 = value + end subroutine s2 + subroutine s4(t4,value) + integer(kind=4) :: value + integer(kind=4) :: t4 +!f2py intent(out) t4 + t4 = value + end subroutine s4 + subroutine s8(t8,value) + integer(kind=8) :: value + integer(kind=8) :: t8 +!f2py intent(out) t8 + t8 = value + end subroutine s8 +end module f90_return_integer diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_logical/foo77.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_logical/foo77.f new file mode 100644 index 0000000000000000000000000000000000000000..ef530145fedf8b5cf3a05bdf0a46a4e22150007b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_logical/foo77.f @@ -0,0 +1,56 @@ + function t0(value) + logical value + logical t0 + t0 = value + end + function t1(value) + logical*1 value + logical*1 t1 + t1 = value + end + function t2(value) + logical*2 value + logical*2 t2 + t2 = value + end + function t4(value) + logical*4 value + logical*4 t4 + t4 = value + end +c function t8(value) +c logical*8 value +c logical*8 t8 +c t8 = value +c end + + subroutine s0(t0,value) + logical value + logical t0 +cf2py intent(out) t0 + t0 = value + end + subroutine s1(t1,value) + logical*1 value + logical*1 t1 +cf2py intent(out) t1 + t1 = value + end + subroutine s2(t2,value) + logical*2 value + logical*2 t2 +cf2py intent(out) t2 + t2 = value + end + subroutine s4(t4,value) + logical*4 value + logical*4 t4 +cf2py intent(out) t4 + t4 = value + end +c subroutine s8(t8,value) +c logical*8 value +c logical*8 t8 +cf2py intent(out) t8 +c t8 = value +c end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_logical/foo90.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_logical/foo90.f90 new file mode 100644 index 0000000000000000000000000000000000000000..a4526468e3719140f0ed7d50a5f3a31d78d1d2de --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_logical/foo90.f90 @@ -0,0 +1,59 @@ +module f90_return_logical + contains + function t0(value) + logical :: value + logical :: t0 + t0 = value + end function t0 + function t1(value) + logical(kind=1) :: value + logical(kind=1) :: t1 + t1 = value + end function t1 + function t2(value) + logical(kind=2) :: value + logical(kind=2) :: t2 + t2 = value + end function t2 + function t4(value) + logical(kind=4) :: value + logical(kind=4) :: t4 + t4 = value + end function t4 + function t8(value) + logical(kind=8) :: value + logical(kind=8) :: t8 + t8 = value + end function t8 + + subroutine s0(t0,value) + logical :: value + logical :: t0 +!f2py intent(out) t0 + t0 = value + end subroutine s0 + subroutine s1(t1,value) + logical(kind=1) :: value + logical(kind=1) :: t1 +!f2py intent(out) t1 + t1 = value + end subroutine s1 + subroutine s2(t2,value) + logical(kind=2) :: value + logical(kind=2) :: t2 +!f2py intent(out) t2 + t2 = value + end subroutine s2 + subroutine s4(t4,value) + logical(kind=4) :: value + logical(kind=4) :: t4 +!f2py intent(out) t4 + t4 = value + end subroutine s4 + subroutine s8(t8,value) + logical(kind=8) :: value + logical(kind=8) :: t8 +!f2py intent(out) t8 + t8 = value + end subroutine s8 +end module f90_return_logical diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_real/foo77.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_real/foo77.f new file mode 100644 index 0000000000000000000000000000000000000000..bf43dbf11773d8282f3b9a7d7c4ba9da23ee6f27 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_real/foo77.f @@ -0,0 +1,45 @@ + function t0(value) + real value + real t0 + t0 = value + end + function t4(value) + real*4 value + real*4 t4 + t4 = value + end + function t8(value) + real*8 value + real*8 t8 + t8 = value + end + function td(value) + double precision value + double precision td + td = value + end + + subroutine s0(t0,value) + real value + real t0 +cf2py intent(out) t0 + t0 = value + end + subroutine s4(t4,value) + real*4 value + real*4 t4 +cf2py intent(out) t4 + t4 = value + end + subroutine s8(t8,value) + real*8 value + real*8 t8 +cf2py intent(out) t8 + t8 = value + end + subroutine sd(td,value) + double precision value + double precision td +cf2py intent(out) td + td = value + end diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_real/foo90.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_real/foo90.f90 new file mode 100644 index 0000000000000000000000000000000000000000..df9719980f2861678d5c1e4b0529a9eb0e375021 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/return_real/foo90.f90 @@ -0,0 +1,48 @@ +module f90_return_real + contains + function t0(value) + real :: value + real :: t0 + t0 = value + end function t0 + function t4(value) + real(kind=4) :: value + real(kind=4) :: t4 + t4 = value + end function t4 + function t8(value) + real(kind=8) :: value + real(kind=8) :: t8 + t8 = value + end function t8 + function td(value) + double precision :: value + double precision :: td + td = value + end function td + + subroutine s0(t0,value) + real :: value + real :: t0 +!f2py intent(out) t0 + t0 = value + end subroutine s0 + subroutine s4(t4,value) + real(kind=4) :: value + real(kind=4) :: t4 +!f2py intent(out) t4 + t4 = value + end subroutine s4 + subroutine s8(t8,value) + real(kind=8) :: value + real(kind=8) :: t8 +!f2py intent(out) t8 + t8 = value + end subroutine s8 + subroutine sd(td,value) + double precision :: value + double precision :: td +!f2py intent(out) td + td = value + end subroutine sd +end module f90_return_real diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/size/foo.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/size/foo.f90 new file mode 100644 index 0000000000000000000000000000000000000000..5b66f8c430d79a8438ad062466a97cf8c00dfb16 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/size/foo.f90 @@ -0,0 +1,44 @@ + +subroutine foo(a, n, m, b) + implicit none + + real, intent(in) :: a(n, m) + integer, intent(in) :: n, m + real, intent(out) :: b(size(a, 1)) + + integer :: i + + do i = 1, size(b) + b(i) = sum(a(i,:)) + enddo +end subroutine + +subroutine trans(x,y) + implicit none + real, intent(in), dimension(:,:) :: x + real, intent(out), dimension( size(x,2), size(x,1) ) :: y + integer :: N, M, i, j + N = size(x,1) + M = size(x,2) + DO i=1,N + do j=1,M + y(j,i) = x(i,j) + END DO + END DO +end subroutine trans + +subroutine flatten(x,y) + implicit none + real, intent(in), dimension(:,:) :: x + real, intent(out), dimension( size(x) ) :: y + integer :: N, M, i, j, k + N = size(x,1) + M = size(x,2) + k = 1 + DO i=1,N + do j=1,M + y(k) = x(i,j) + k = k + 1 + END DO + END DO +end subroutine flatten diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/char.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/char.f90 new file mode 100644 index 0000000000000000000000000000000000000000..bb7985ce50f2aa252aaca96aba6ef5d5f5d51844 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/char.f90 @@ -0,0 +1,29 @@ +MODULE char_test + +CONTAINS + +SUBROUTINE change_strings(strings, n_strs, out_strings) + IMPLICIT NONE + + ! Inputs + INTEGER, INTENT(IN) :: n_strs + CHARACTER, INTENT(IN), DIMENSION(2,n_strs) :: strings + CHARACTER, INTENT(OUT), DIMENSION(2,n_strs) :: out_strings + +!f2py INTEGER, INTENT(IN) :: n_strs +!f2py CHARACTER, INTENT(IN), DIMENSION(2,n_strs) :: strings +!f2py CHARACTER, INTENT(OUT), DIMENSION(2,n_strs) :: strings + + ! Misc. + INTEGER*4 :: j + + + DO j=1, n_strs + out_strings(1,j) = strings(1,j) + out_strings(2,j) = 'A' + END DO + +END SUBROUTINE change_strings + +END MODULE char_test + diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/fixed_string.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/fixed_string.f90 new file mode 100644 index 0000000000000000000000000000000000000000..7fd1585430fb05f84fb850ef4656d94e8a0804e9 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/fixed_string.f90 @@ -0,0 +1,34 @@ +function sint(s) result(i) + implicit none + character(len=*) :: s + integer :: j, i + i = 0 + do j=len(s), 1, -1 + if (.not.((i.eq.0).and.(s(j:j).eq.' '))) then + i = i + ichar(s(j:j)) * 10 ** (j - 1) + endif + end do + return + end function sint + + function test_in_bytes4(a) result (i) + implicit none + integer :: sint + character(len=4) :: a + integer :: i + i = sint(a) + a(1:1) = 'A' + return + end function test_in_bytes4 + + function test_inout_bytes4(a) result (i) + implicit none + integer :: sint + character(len=4), intent(inout) :: a + integer :: i + if (a(1:1).ne.' ') then + a(1:1) = 'E' + endif + i = sint(a) + return + end function test_inout_bytes4 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh24008.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh24008.f new file mode 100644 index 0000000000000000000000000000000000000000..ab64cf771f68bbcecc8ac2d5d649545fc357e15b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh24008.f @@ -0,0 +1,8 @@ + SUBROUTINE GREET(NAME, GREETING) + CHARACTER NAME*(*), GREETING*(*) + CHARACTER*(50) MESSAGE + + MESSAGE = 'Hello, ' // NAME // ', ' // GREETING +c$$$ PRINT *, MESSAGE + + END SUBROUTINE GREET diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh24662.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh24662.f90 new file mode 100644 index 0000000000000000000000000000000000000000..ca53413cc9b48f1c8d476d329eb4b773695dd08c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh24662.f90 @@ -0,0 +1,7 @@ +subroutine string_inout_optional(output) + implicit none + character*(32), optional, intent(inout) :: output + if (present(output)) then + output="output string" + endif +end subroutine diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh25286.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh25286.f90 new file mode 100644 index 0000000000000000000000000000000000000000..db1c7100d2ab812de5d212c1bbd255cf2ae60be3 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh25286.f90 @@ -0,0 +1,14 @@ +subroutine charint(trans, info) + character, intent(in) :: trans + integer, intent(out) :: info + if (trans == 'N') then + info = 1 + else if (trans == 'T') then + info = 2 + else if (trans == 'C') then + info = 3 + else + info = -1 + end if + +end subroutine charint diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh25286.pyf b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh25286.pyf new file mode 100644 index 0000000000000000000000000000000000000000..7b9609071bce3e775703b12c430f411af09e6eee --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh25286.pyf @@ -0,0 +1,12 @@ +python module _char_handling_test + interface + subroutine charint(trans, info) + callstatement (*f2py_func)(&trans, &info) + callprotoargument char*, int* + + character, intent(in), check(trans=='N'||trans=='T'||trans=='C') :: trans = 'N' + integer intent(out) :: info + + end subroutine charint + end interface +end python module _char_handling_test diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh25286_bc.pyf b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh25286_bc.pyf new file mode 100644 index 0000000000000000000000000000000000000000..e7b10fa9215e88e56794e9c73d0b13872cbd953c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/gh25286_bc.pyf @@ -0,0 +1,12 @@ +python module _char_handling_test + interface + subroutine charint(trans, info) + callstatement (*f2py_func)(&trans, &info) + callprotoargument char*, int* + + character, intent(in), check(*trans=='N'||*trans=='T'||*trans=='C') :: trans = 'N' + integer intent(out) :: info + + end subroutine charint + end interface +end python module _char_handling_test diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/scalar_string.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/scalar_string.f90 new file mode 100644 index 0000000000000000000000000000000000000000..f8f076172ab48ca4834d631b362f47ca374db5e4 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/scalar_string.f90 @@ -0,0 +1,9 @@ +MODULE string_test + + character(len=8) :: string + character string77 * 8 + + character(len=12), dimension(5,7) :: strarr + character strarr77(5,7) * 12 + +END MODULE string_test diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/string.f b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/string.f new file mode 100644 index 0000000000000000000000000000000000000000..5210ca4dc054de60488e45baa12b6c8bc89fc9eb --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/string/string.f @@ -0,0 +1,12 @@ +C FILE: STRING.F + SUBROUTINE FOO(A,B,C,D) + CHARACTER*5 A, B + CHARACTER*(*) C,D +Cf2py intent(in) a,c +Cf2py intent(inout) b,d + A(1:1) = 'A' + B(1:1) = 'B' + C(1:1) = 'C' + D(1:1) = 'D' + END +C END OF FILE STRING.F diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/value_attrspec/gh21665.f90 b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/value_attrspec/gh21665.f90 new file mode 100644 index 0000000000000000000000000000000000000000..7d9dc0fd4acbc081f55edfafb5dea981dcf279d5 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/src/value_attrspec/gh21665.f90 @@ -0,0 +1,9 @@ +module fortfuncs + implicit none +contains + subroutine square(x,y) + integer, intent(in), value :: x + integer, intent(out) :: y + y = x*x + end subroutine square +end module fortfuncs diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_abstract_interface.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_abstract_interface.py new file mode 100644 index 0000000000000000000000000000000000000000..2c6555aecea193d97aa5f37aea9fd3cbfe9074e6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_abstract_interface.py @@ -0,0 +1,26 @@ +from pathlib import Path +import pytest +import textwrap +from . import util +from numpy.f2py import crackfortran +from numpy.testing import IS_WASM + + +@pytest.mark.skipif(IS_WASM, reason="Cannot start subprocess") +@pytest.mark.slow +class TestAbstractInterface(util.F2PyTest): + sources = [util.getpath("tests", "src", "abstract_interface", "foo.f90")] + + skip = ["add1", "add2"] + + def test_abstract_interface(self): + assert self.module.ops_module.foo(3, 5) == (8, 13) + + def test_parse_abstract_interface(self): + # Test gh18403 + fpath = util.getpath("tests", "src", "abstract_interface", + "gh18403_mod.f90") + mod = crackfortran.crackfortran([str(fpath)]) + assert len(mod) == 1 + assert len(mod[0]["body"]) == 1 + assert mod[0]["body"][0]["block"] == "abstract interface" diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_array_from_pyobj.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_array_from_pyobj.py new file mode 100644 index 0000000000000000000000000000000000000000..d5ae235e7d82b3a9ea96b795d75dbec702cf4a65 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_array_from_pyobj.py @@ -0,0 +1,682 @@ +import os +import sys +import copy +import platform +import pytest +from pathlib import Path + +import numpy as np + +from numpy.testing import assert_, assert_equal +from numpy._core._type_aliases import c_names_dict as _c_names_dict +from . import util + +wrap = None + +# Extend core typeinfo with CHARACTER to test dtype('c') +c_names_dict = dict( + CHARACTER=np.dtype("c"), + **_c_names_dict +) + + +def get_testdir(): + testroot = Path(__file__).resolve().parent / "src" + return testroot / "array_from_pyobj" + +def setup_module(): + """ + Build the required testing extension module + + """ + global wrap + + if wrap is None: + src = [ + get_testdir() / "wrapmodule.c", + ] + wrap = util.build_meson(src, module_name = "test_array_from_pyobj_ext") + + +def flags_info(arr): + flags = wrap.array_attrs(arr)[6] + return flags2names(flags) + + +def flags2names(flags): + info = [] + for flagname in [ + "CONTIGUOUS", + "FORTRAN", + "OWNDATA", + "ENSURECOPY", + "ENSUREARRAY", + "ALIGNED", + "NOTSWAPPED", + "WRITEABLE", + "WRITEBACKIFCOPY", + "UPDATEIFCOPY", + "BEHAVED", + "BEHAVED_RO", + "CARRAY", + "FARRAY", + ]: + if abs(flags) & getattr(wrap, flagname, 0): + info.append(flagname) + return info + + +class Intent: + def __init__(self, intent_list=[]): + self.intent_list = intent_list[:] + flags = 0 + for i in intent_list: + if i == "optional": + flags |= wrap.F2PY_OPTIONAL + else: + flags |= getattr(wrap, "F2PY_INTENT_" + i.upper()) + self.flags = flags + + def __getattr__(self, name): + name = name.lower() + if name == "in_": + name = "in" + return self.__class__(self.intent_list + [name]) + + def __str__(self): + return "intent(%s)" % (",".join(self.intent_list)) + + def __repr__(self): + return "Intent(%r)" % (self.intent_list) + + def is_intent(self, *names): + for name in names: + if name not in self.intent_list: + return False + return True + + def is_intent_exact(self, *names): + return len(self.intent_list) == len(names) and self.is_intent(*names) + + +intent = Intent() + +_type_names = [ + "BOOL", + "BYTE", + "UBYTE", + "SHORT", + "USHORT", + "INT", + "UINT", + "LONG", + "ULONG", + "LONGLONG", + "ULONGLONG", + "FLOAT", + "DOUBLE", + "CFLOAT", + "STRING1", + "STRING5", + "CHARACTER", +] + +_cast_dict = {"BOOL": ["BOOL"]} +_cast_dict["BYTE"] = _cast_dict["BOOL"] + ["BYTE"] +_cast_dict["UBYTE"] = _cast_dict["BOOL"] + ["UBYTE"] +_cast_dict["BYTE"] = ["BYTE"] +_cast_dict["UBYTE"] = ["UBYTE"] +_cast_dict["SHORT"] = _cast_dict["BYTE"] + ["UBYTE", "SHORT"] +_cast_dict["USHORT"] = _cast_dict["UBYTE"] + ["BYTE", "USHORT"] +_cast_dict["INT"] = _cast_dict["SHORT"] + ["USHORT", "INT"] +_cast_dict["UINT"] = _cast_dict["USHORT"] + ["SHORT", "UINT"] + +_cast_dict["LONG"] = _cast_dict["INT"] + ["LONG"] +_cast_dict["ULONG"] = _cast_dict["UINT"] + ["ULONG"] + +_cast_dict["LONGLONG"] = _cast_dict["LONG"] + ["LONGLONG"] +_cast_dict["ULONGLONG"] = _cast_dict["ULONG"] + ["ULONGLONG"] + +_cast_dict["FLOAT"] = _cast_dict["SHORT"] + ["USHORT", "FLOAT"] +_cast_dict["DOUBLE"] = _cast_dict["INT"] + ["UINT", "FLOAT", "DOUBLE"] + +_cast_dict["CFLOAT"] = _cast_dict["FLOAT"] + ["CFLOAT"] + +_cast_dict['STRING1'] = ['STRING1'] +_cast_dict['STRING5'] = ['STRING5'] +_cast_dict['CHARACTER'] = ['CHARACTER'] + +# 32 bit system malloc typically does not provide the alignment required by +# 16 byte long double types this means the inout intent cannot be satisfied +# and several tests fail as the alignment flag can be randomly true or fals +# when numpy gains an aligned allocator the tests could be enabled again +# +# Furthermore, on macOS ARM64, LONGDOUBLE is an alias for DOUBLE. +if ((np.intp().dtype.itemsize != 4 or np.clongdouble().dtype.alignment <= 8) + and sys.platform != "win32" + and (platform.system(), platform.processor()) != ("Darwin", "arm")): + _type_names.extend(["LONGDOUBLE", "CDOUBLE", "CLONGDOUBLE"]) + _cast_dict["LONGDOUBLE"] = _cast_dict["LONG"] + [ + "ULONG", + "FLOAT", + "DOUBLE", + "LONGDOUBLE", + ] + _cast_dict["CLONGDOUBLE"] = _cast_dict["LONGDOUBLE"] + [ + "CFLOAT", + "CDOUBLE", + "CLONGDOUBLE", + ] + _cast_dict["CDOUBLE"] = _cast_dict["DOUBLE"] + ["CFLOAT", "CDOUBLE"] + + +class Type: + _type_cache = {} + + def __new__(cls, name): + if isinstance(name, np.dtype): + dtype0 = name + name = None + for n, i in c_names_dict.items(): + if not isinstance(i, type) and dtype0.type is i.type: + name = n + break + obj = cls._type_cache.get(name.upper(), None) + if obj is not None: + return obj + obj = object.__new__(cls) + obj._init(name) + cls._type_cache[name.upper()] = obj + return obj + + def _init(self, name): + self.NAME = name.upper() + + if self.NAME == 'CHARACTER': + info = c_names_dict[self.NAME] + self.type_num = getattr(wrap, 'NPY_STRING') + self.elsize = 1 + self.dtype = np.dtype('c') + elif self.NAME.startswith('STRING'): + info = c_names_dict[self.NAME[:6]] + self.type_num = getattr(wrap, 'NPY_STRING') + self.elsize = int(self.NAME[6:] or 0) + self.dtype = np.dtype(f'S{self.elsize}') + else: + info = c_names_dict[self.NAME] + self.type_num = getattr(wrap, 'NPY_' + self.NAME) + self.elsize = info.itemsize + self.dtype = np.dtype(info.type) + + assert self.type_num == info.num + self.type = info.type + self.dtypechar = info.char + + def __repr__(self): + return (f"Type({self.NAME})|type_num={self.type_num}," + f" dtype={self.dtype}," + f" type={self.type}, elsize={self.elsize}," + f" dtypechar={self.dtypechar}") + + def cast_types(self): + return [self.__class__(_m) for _m in _cast_dict[self.NAME]] + + def all_types(self): + return [self.__class__(_m) for _m in _type_names] + + def smaller_types(self): + bits = c_names_dict[self.NAME].alignment + types = [] + for name in _type_names: + if c_names_dict[name].alignment < bits: + types.append(Type(name)) + return types + + def equal_types(self): + bits = c_names_dict[self.NAME].alignment + types = [] + for name in _type_names: + if name == self.NAME: + continue + if c_names_dict[name].alignment == bits: + types.append(Type(name)) + return types + + def larger_types(self): + bits = c_names_dict[self.NAME].alignment + types = [] + for name in _type_names: + if c_names_dict[name].alignment > bits: + types.append(Type(name)) + return types + + +class Array: + + def __repr__(self): + return (f'Array({self.type}, {self.dims}, {self.intent},' + f' {self.obj})|arr={self.arr}') + + def __init__(self, typ, dims, intent, obj): + self.type = typ + self.dims = dims + self.intent = intent + self.obj_copy = copy.deepcopy(obj) + self.obj = obj + + # arr.dtypechar may be different from typ.dtypechar + self.arr = wrap.call(typ.type_num, + typ.elsize, + dims, intent.flags, obj) + + assert isinstance(self.arr, np.ndarray) + + self.arr_attr = wrap.array_attrs(self.arr) + + if len(dims) > 1: + if self.intent.is_intent("c"): + assert (intent.flags & wrap.F2PY_INTENT_C) + assert not self.arr.flags["FORTRAN"] + assert self.arr.flags["CONTIGUOUS"] + assert (not self.arr_attr[6] & wrap.FORTRAN) + else: + assert (not intent.flags & wrap.F2PY_INTENT_C) + assert self.arr.flags["FORTRAN"] + assert not self.arr.flags["CONTIGUOUS"] + assert (self.arr_attr[6] & wrap.FORTRAN) + + if obj is None: + self.pyarr = None + self.pyarr_attr = None + return + + if intent.is_intent("cache"): + assert isinstance(obj, np.ndarray), repr(type(obj)) + self.pyarr = np.array(obj).reshape(*dims).copy() + else: + self.pyarr = np.array( + np.array(obj, dtype=typ.dtypechar).reshape(*dims), + order=self.intent.is_intent("c") and "C" or "F", + ) + assert self.pyarr.dtype == typ + self.pyarr.setflags(write=self.arr.flags["WRITEABLE"]) + assert self.pyarr.flags["OWNDATA"], (obj, intent) + self.pyarr_attr = wrap.array_attrs(self.pyarr) + + if len(dims) > 1: + if self.intent.is_intent("c"): + assert not self.pyarr.flags["FORTRAN"] + assert self.pyarr.flags["CONTIGUOUS"] + assert (not self.pyarr_attr[6] & wrap.FORTRAN) + else: + assert self.pyarr.flags["FORTRAN"] + assert not self.pyarr.flags["CONTIGUOUS"] + assert (self.pyarr_attr[6] & wrap.FORTRAN) + + assert self.arr_attr[1] == self.pyarr_attr[1] # nd + assert self.arr_attr[2] == self.pyarr_attr[2] # dimensions + if self.arr_attr[1] <= 1: + assert self.arr_attr[3] == self.pyarr_attr[3], repr(( + self.arr_attr[3], + self.pyarr_attr[3], + self.arr.tobytes(), + self.pyarr.tobytes(), + )) # strides + assert self.arr_attr[5][-2:] == self.pyarr_attr[5][-2:], repr(( + self.arr_attr[5], self.pyarr_attr[5] + )) # descr + assert self.arr_attr[6] == self.pyarr_attr[6], repr(( + self.arr_attr[6], + self.pyarr_attr[6], + flags2names(0 * self.arr_attr[6] - self.pyarr_attr[6]), + flags2names(self.arr_attr[6]), + intent, + )) # flags + + if intent.is_intent("cache"): + assert self.arr_attr[5][3] >= self.type.elsize + else: + assert self.arr_attr[5][3] == self.type.elsize + assert (self.arr_equal(self.pyarr, self.arr)) + + if isinstance(self.obj, np.ndarray): + if typ.elsize == Type(obj.dtype).elsize: + if not intent.is_intent("copy") and self.arr_attr[1] <= 1: + assert self.has_shared_memory() + + def arr_equal(self, arr1, arr2): + if arr1.shape != arr2.shape: + return False + return (arr1 == arr2).all() + + def __str__(self): + return str(self.arr) + + def has_shared_memory(self): + """Check that created array shares data with input array.""" + if self.obj is self.arr: + return True + if not isinstance(self.obj, np.ndarray): + return False + obj_attr = wrap.array_attrs(self.obj) + return obj_attr[0] == self.arr_attr[0] + + +class TestIntent: + def test_in_out(self): + assert str(intent.in_.out) == "intent(in,out)" + assert intent.in_.c.is_intent("c") + assert not intent.in_.c.is_intent_exact("c") + assert intent.in_.c.is_intent_exact("c", "in") + assert intent.in_.c.is_intent_exact("in", "c") + assert not intent.in_.is_intent("c") + + +class TestSharedMemory: + + @pytest.fixture(autouse=True, scope="class", params=_type_names) + def setup_type(self, request): + request.cls.type = Type(request.param) + request.cls.array = lambda self, dims, intent, obj: Array( + Type(request.param), dims, intent, obj) + + @property + def num2seq(self): + if self.type.NAME.startswith('STRING'): + elsize = self.type.elsize + return ['1' * elsize, '2' * elsize] + return [1, 2] + + @property + def num23seq(self): + if self.type.NAME.startswith('STRING'): + elsize = self.type.elsize + return [['1' * elsize, '2' * elsize, '3' * elsize], + ['4' * elsize, '5' * elsize, '6' * elsize]] + return [[1, 2, 3], [4, 5, 6]] + + def test_in_from_2seq(self): + a = self.array([2], intent.in_, self.num2seq) + assert not a.has_shared_memory() + + def test_in_from_2casttype(self): + for t in self.type.cast_types(): + obj = np.array(self.num2seq, dtype=t.dtype) + a = self.array([len(self.num2seq)], intent.in_, obj) + if t.elsize == self.type.elsize: + assert a.has_shared_memory(), repr((self.type.dtype, t.dtype)) + else: + assert not a.has_shared_memory() + + @pytest.mark.parametrize("write", ["w", "ro"]) + @pytest.mark.parametrize("order", ["C", "F"]) + @pytest.mark.parametrize("inp", ["2seq", "23seq"]) + def test_in_nocopy(self, write, order, inp): + """Test if intent(in) array can be passed without copies""" + seq = getattr(self, "num" + inp) + obj = np.array(seq, dtype=self.type.dtype, order=order) + obj.setflags(write=(write == 'w')) + a = self.array(obj.shape, + ((order == 'C' and intent.in_.c) or intent.in_), obj) + assert a.has_shared_memory() + + def test_inout_2seq(self): + obj = np.array(self.num2seq, dtype=self.type.dtype) + a = self.array([len(self.num2seq)], intent.inout, obj) + assert a.has_shared_memory() + + try: + a = self.array([2], intent.in_.inout, self.num2seq) + except TypeError as msg: + if not str(msg).startswith( + "failed to initialize intent(inout|inplace|cache) array"): + raise + else: + raise SystemError("intent(inout) should have failed on sequence") + + def test_f_inout_23seq(self): + obj = np.array(self.num23seq, dtype=self.type.dtype, order="F") + shape = (len(self.num23seq), len(self.num23seq[0])) + a = self.array(shape, intent.in_.inout, obj) + assert a.has_shared_memory() + + obj = np.array(self.num23seq, dtype=self.type.dtype, order="C") + shape = (len(self.num23seq), len(self.num23seq[0])) + try: + a = self.array(shape, intent.in_.inout, obj) + except ValueError as msg: + if not str(msg).startswith( + "failed to initialize intent(inout) array"): + raise + else: + raise SystemError( + "intent(inout) should have failed on improper array") + + def test_c_inout_23seq(self): + obj = np.array(self.num23seq, dtype=self.type.dtype) + shape = (len(self.num23seq), len(self.num23seq[0])) + a = self.array(shape, intent.in_.c.inout, obj) + assert a.has_shared_memory() + + def test_in_copy_from_2casttype(self): + for t in self.type.cast_types(): + obj = np.array(self.num2seq, dtype=t.dtype) + a = self.array([len(self.num2seq)], intent.in_.copy, obj) + assert not a.has_shared_memory() + + def test_c_in_from_23seq(self): + a = self.array( + [len(self.num23seq), len(self.num23seq[0])], intent.in_, + self.num23seq) + assert not a.has_shared_memory() + + def test_in_from_23casttype(self): + for t in self.type.cast_types(): + obj = np.array(self.num23seq, dtype=t.dtype) + a = self.array( + [len(self.num23seq), len(self.num23seq[0])], intent.in_, obj) + assert not a.has_shared_memory() + + def test_f_in_from_23casttype(self): + for t in self.type.cast_types(): + obj = np.array(self.num23seq, dtype=t.dtype, order="F") + a = self.array( + [len(self.num23seq), len(self.num23seq[0])], intent.in_, obj) + if t.elsize == self.type.elsize: + assert a.has_shared_memory() + else: + assert not a.has_shared_memory() + + def test_c_in_from_23casttype(self): + for t in self.type.cast_types(): + obj = np.array(self.num23seq, dtype=t.dtype) + a = self.array( + [len(self.num23seq), len(self.num23seq[0])], intent.in_.c, obj) + if t.elsize == self.type.elsize: + assert a.has_shared_memory() + else: + assert not a.has_shared_memory() + + def test_f_copy_in_from_23casttype(self): + for t in self.type.cast_types(): + obj = np.array(self.num23seq, dtype=t.dtype, order="F") + a = self.array( + [len(self.num23seq), len(self.num23seq[0])], intent.in_.copy, + obj) + assert not a.has_shared_memory() + + def test_c_copy_in_from_23casttype(self): + for t in self.type.cast_types(): + obj = np.array(self.num23seq, dtype=t.dtype) + a = self.array( + [len(self.num23seq), len(self.num23seq[0])], intent.in_.c.copy, + obj) + assert not a.has_shared_memory() + + def test_in_cache_from_2casttype(self): + for t in self.type.all_types(): + if t.elsize != self.type.elsize: + continue + obj = np.array(self.num2seq, dtype=t.dtype) + shape = (len(self.num2seq), ) + a = self.array(shape, intent.in_.c.cache, obj) + assert a.has_shared_memory() + + a = self.array(shape, intent.in_.cache, obj) + assert a.has_shared_memory() + + obj = np.array(self.num2seq, dtype=t.dtype, order="F") + a = self.array(shape, intent.in_.c.cache, obj) + assert a.has_shared_memory() + + a = self.array(shape, intent.in_.cache, obj) + assert a.has_shared_memory(), repr(t.dtype) + + try: + a = self.array(shape, intent.in_.cache, obj[::-1]) + except ValueError as msg: + if not str(msg).startswith( + "failed to initialize intent(cache) array"): + raise + else: + raise SystemError( + "intent(cache) should have failed on multisegmented array") + + def test_in_cache_from_2casttype_failure(self): + for t in self.type.all_types(): + if t.NAME == 'STRING': + # string elsize is 0, so skipping the test + continue + if t.elsize >= self.type.elsize: + continue + is_int = np.issubdtype(t.dtype, np.integer) + if is_int and int(self.num2seq[0]) > np.iinfo(t.dtype).max: + # skip test if num2seq would trigger an overflow error + continue + obj = np.array(self.num2seq, dtype=t.dtype) + shape = (len(self.num2seq), ) + try: + self.array(shape, intent.in_.cache, obj) # Should succeed + except ValueError as msg: + if not str(msg).startswith( + "failed to initialize intent(cache) array"): + raise + else: + raise SystemError( + "intent(cache) should have failed on smaller array") + + def test_cache_hidden(self): + shape = (2, ) + a = self.array(shape, intent.cache.hide, None) + assert a.arr.shape == shape + + shape = (2, 3) + a = self.array(shape, intent.cache.hide, None) + assert a.arr.shape == shape + + shape = (-1, 3) + try: + a = self.array(shape, intent.cache.hide, None) + except ValueError as msg: + if not str(msg).startswith( + "failed to create intent(cache|hide)|optional array"): + raise + else: + raise SystemError( + "intent(cache) should have failed on undefined dimensions") + + def test_hidden(self): + shape = (2, ) + a = self.array(shape, intent.hide, None) + assert a.arr.shape == shape + assert a.arr_equal(a.arr, np.zeros(shape, dtype=self.type.dtype)) + + shape = (2, 3) + a = self.array(shape, intent.hide, None) + assert a.arr.shape == shape + assert a.arr_equal(a.arr, np.zeros(shape, dtype=self.type.dtype)) + assert a.arr.flags["FORTRAN"] and not a.arr.flags["CONTIGUOUS"] + + shape = (2, 3) + a = self.array(shape, intent.c.hide, None) + assert a.arr.shape == shape + assert a.arr_equal(a.arr, np.zeros(shape, dtype=self.type.dtype)) + assert not a.arr.flags["FORTRAN"] and a.arr.flags["CONTIGUOUS"] + + shape = (-1, 3) + try: + a = self.array(shape, intent.hide, None) + except ValueError as msg: + if not str(msg).startswith( + "failed to create intent(cache|hide)|optional array"): + raise + else: + raise SystemError( + "intent(hide) should have failed on undefined dimensions") + + def test_optional_none(self): + shape = (2, ) + a = self.array(shape, intent.optional, None) + assert a.arr.shape == shape + assert a.arr_equal(a.arr, np.zeros(shape, dtype=self.type.dtype)) + + shape = (2, 3) + a = self.array(shape, intent.optional, None) + assert a.arr.shape == shape + assert a.arr_equal(a.arr, np.zeros(shape, dtype=self.type.dtype)) + assert a.arr.flags["FORTRAN"] and not a.arr.flags["CONTIGUOUS"] + + shape = (2, 3) + a = self.array(shape, intent.c.optional, None) + assert a.arr.shape == shape + assert a.arr_equal(a.arr, np.zeros(shape, dtype=self.type.dtype)) + assert not a.arr.flags["FORTRAN"] and a.arr.flags["CONTIGUOUS"] + + def test_optional_from_2seq(self): + obj = self.num2seq + shape = (len(obj), ) + a = self.array(shape, intent.optional, obj) + assert a.arr.shape == shape + assert not a.has_shared_memory() + + def test_optional_from_23seq(self): + obj = self.num23seq + shape = (len(obj), len(obj[0])) + a = self.array(shape, intent.optional, obj) + assert a.arr.shape == shape + assert not a.has_shared_memory() + + a = self.array(shape, intent.optional.c, obj) + assert a.arr.shape == shape + assert not a.has_shared_memory() + + def test_inplace(self): + obj = np.array(self.num23seq, dtype=self.type.dtype) + assert not obj.flags["FORTRAN"] and obj.flags["CONTIGUOUS"] + shape = obj.shape + a = self.array(shape, intent.inplace, obj) + assert obj[1][2] == a.arr[1][2], repr((obj, a.arr)) + a.arr[1][2] = 54 + assert obj[1][2] == a.arr[1][2] == np.array(54, dtype=self.type.dtype) + assert a.arr is obj + assert obj.flags["FORTRAN"] # obj attributes are changed inplace! + assert not obj.flags["CONTIGUOUS"] + + def test_inplace_from_casttype(self): + for t in self.type.cast_types(): + if t is self.type: + continue + obj = np.array(self.num23seq, dtype=t.dtype) + assert obj.dtype.type == t.type + assert obj.dtype.type is not self.type.type + assert not obj.flags["FORTRAN"] and obj.flags["CONTIGUOUS"] + shape = obj.shape + a = self.array(shape, intent.inplace, obj) + assert obj[1][2] == a.arr[1][2], repr((obj, a.arr)) + a.arr[1][2] = 54 + assert obj[1][2] == a.arr[1][2] == np.array(54, + dtype=self.type.dtype) + assert a.arr is obj + assert obj.flags["FORTRAN"] # obj attributes changed inplace! + assert not obj.flags["CONTIGUOUS"] + assert obj.dtype.type is self.type.type # obj changed inplace! diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_assumed_shape.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_assumed_shape.py new file mode 100644 index 0000000000000000000000000000000000000000..d4664cf88cbe9701105a5d428332e3aa0d623930 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_assumed_shape.py @@ -0,0 +1,49 @@ +import os +import pytest +import tempfile + +from . import util + + +class TestAssumedShapeSumExample(util.F2PyTest): + sources = [ + util.getpath("tests", "src", "assumed_shape", "foo_free.f90"), + util.getpath("tests", "src", "assumed_shape", "foo_use.f90"), + util.getpath("tests", "src", "assumed_shape", "precision.f90"), + util.getpath("tests", "src", "assumed_shape", "foo_mod.f90"), + util.getpath("tests", "src", "assumed_shape", ".f2py_f2cmap"), + ] + + @pytest.mark.slow + def test_all(self): + r = self.module.fsum([1, 2]) + assert r == 3 + r = self.module.sum([1, 2]) + assert r == 3 + r = self.module.sum_with_use([1, 2]) + assert r == 3 + + r = self.module.mod.sum([1, 2]) + assert r == 3 + r = self.module.mod.fsum([1, 2]) + assert r == 3 + + +class TestF2cmapOption(TestAssumedShapeSumExample): + def setup_method(self): + # Use a custom file name for .f2py_f2cmap + self.sources = list(self.sources) + f2cmap_src = self.sources.pop(-1) + + self.f2cmap_file = tempfile.NamedTemporaryFile(delete=False) + with open(f2cmap_src, "rb") as f: + self.f2cmap_file.write(f.read()) + self.f2cmap_file.close() + + self.sources.append(self.f2cmap_file.name) + self.options = ["--f2cmap", self.f2cmap_file.name] + + super().setup_method() + + def teardown_method(self): + os.unlink(self.f2cmap_file.name) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_block_docstring.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_block_docstring.py new file mode 100644 index 0000000000000000000000000000000000000000..16b5559e8e42da3fdcf0890fc08fb0a248bd69c1 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_block_docstring.py @@ -0,0 +1,18 @@ +import sys +import pytest +from . import util + +from numpy.testing import IS_PYPY + + +@pytest.mark.slow +class TestBlockDocString(util.F2PyTest): + sources = [util.getpath("tests", "src", "block_docstring", "foo.f")] + + @pytest.mark.skipif(sys.platform == "win32", + reason="Fails with MinGW64 Gfortran (Issue #9673)") + @pytest.mark.xfail(IS_PYPY, + reason="PyPy cannot modify tp_doc after PyType_Ready") + def test_block_docstring(self): + expected = "bar : 'i'-array(2,3)\n" + assert self.module.block.__doc__ == expected diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_callback.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_callback.py new file mode 100644 index 0000000000000000000000000000000000000000..8bd6175a3eb95bf8eb0931fd8341f1c22789ce25 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_callback.py @@ -0,0 +1,246 @@ +import math +import textwrap +import sys +import pytest +import threading +import traceback +import time + +import numpy as np +from numpy.testing import IS_PYPY +from . import util + + +class TestF77Callback(util.F2PyTest): + sources = [util.getpath("tests", "src", "callback", "foo.f")] + + @pytest.mark.parametrize("name", "t,t2".split(",")) + @pytest.mark.slow + def test_all(self, name): + self.check_function(name) + + @pytest.mark.xfail(IS_PYPY, + reason="PyPy cannot modify tp_doc after PyType_Ready") + def test_docstring(self): + expected = textwrap.dedent("""\ + a = t(fun,[fun_extra_args]) + + Wrapper for ``t``. + + Parameters + ---------- + fun : call-back function + + Other Parameters + ---------------- + fun_extra_args : input tuple, optional + Default: () + + Returns + ------- + a : int + + Notes + ----- + Call-back functions:: + + def fun(): return a + Return objects: + a : int + """) + assert self.module.t.__doc__ == expected + + def check_function(self, name): + t = getattr(self.module, name) + r = t(lambda: 4) + assert r == 4 + r = t(lambda a: 5, fun_extra_args=(6, )) + assert r == 5 + r = t(lambda a: a, fun_extra_args=(6, )) + assert r == 6 + r = t(lambda a: 5 + a, fun_extra_args=(7, )) + assert r == 12 + r = t(lambda a: math.degrees(a), fun_extra_args=(math.pi, )) + assert r == 180 + r = t(math.degrees, fun_extra_args=(math.pi, )) + assert r == 180 + + r = t(self.module.func, fun_extra_args=(6, )) + assert r == 17 + r = t(self.module.func0) + assert r == 11 + r = t(self.module.func0._cpointer) + assert r == 11 + + class A: + def __call__(self): + return 7 + + def mth(self): + return 9 + + a = A() + r = t(a) + assert r == 7 + r = t(a.mth) + assert r == 9 + + @pytest.mark.skipif(sys.platform == 'win32', + reason='Fails with MinGW64 Gfortran (Issue #9673)') + def test_string_callback(self): + def callback(code): + if code == "r": + return 0 + else: + return 1 + + f = getattr(self.module, "string_callback") + r = f(callback) + assert r == 0 + + @pytest.mark.skipif(sys.platform == 'win32', + reason='Fails with MinGW64 Gfortran (Issue #9673)') + def test_string_callback_array(self): + # See gh-10027 + cu1 = np.zeros((1, ), "S8") + cu2 = np.zeros((1, 8), "c") + cu3 = np.array([""], "S8") + + def callback(cu, lencu): + if cu.shape != (lencu,): + return 1 + if cu.dtype != "S8": + return 2 + if not np.all(cu == b""): + return 3 + return 0 + + f = getattr(self.module, "string_callback_array") + for cu in [cu1, cu2, cu3]: + res = f(callback, cu, cu.size) + assert res == 0 + + def test_threadsafety(self): + # Segfaults if the callback handling is not threadsafe + + errors = [] + + def cb(): + # Sleep here to make it more likely for another thread + # to call their callback at the same time. + time.sleep(1e-3) + + # Check reentrancy + r = self.module.t(lambda: 123) + assert r == 123 + + return 42 + + def runner(name): + try: + for j in range(50): + r = self.module.t(cb) + assert r == 42 + self.check_function(name) + except Exception: + errors.append(traceback.format_exc()) + + threads = [ + threading.Thread(target=runner, args=(arg, )) + for arg in ("t", "t2") for n in range(20) + ] + + for t in threads: + t.start() + + for t in threads: + t.join() + + errors = "\n\n".join(errors) + if errors: + raise AssertionError(errors) + + def test_hidden_callback(self): + try: + self.module.hidden_callback(2) + except Exception as msg: + assert str(msg).startswith("Callback global_f not defined") + + try: + self.module.hidden_callback2(2) + except Exception as msg: + assert str(msg).startswith("cb: Callback global_f not defined") + + self.module.global_f = lambda x: x + 1 + r = self.module.hidden_callback(2) + assert r == 3 + + self.module.global_f = lambda x: x + 2 + r = self.module.hidden_callback(2) + assert r == 4 + + del self.module.global_f + try: + self.module.hidden_callback(2) + except Exception as msg: + assert str(msg).startswith("Callback global_f not defined") + + self.module.global_f = lambda x=0: x + 3 + r = self.module.hidden_callback(2) + assert r == 5 + + # reproducer of gh18341 + r = self.module.hidden_callback2(2) + assert r == 3 + + +class TestF77CallbackPythonTLS(TestF77Callback): + """ + Callback tests using Python thread-local storage instead of + compiler-provided + """ + + options = ["-DF2PY_USE_PYTHON_TLS"] + + +class TestF90Callback(util.F2PyTest): + sources = [util.getpath("tests", "src", "callback", "gh17797.f90")] + + @pytest.mark.slow + def test_gh17797(self): + def incr(x): + return x + 123 + + y = np.array([1, 2, 3], dtype=np.int64) + r = self.module.gh17797(incr, y) + assert r == 123 + 1 + 2 + 3 + + +class TestGH18335(util.F2PyTest): + """The reproduction of the reported issue requires specific input that + extensions may break the issue conditions, so the reproducer is + implemented as a separate test class. Do not extend this test with + other tests! + """ + sources = [util.getpath("tests", "src", "callback", "gh18335.f90")] + + @pytest.mark.slow + def test_gh18335(self): + def foo(x): + x[0] += 1 + + r = self.module.gh18335(foo) + assert r == 123 + 1 + + +class TestGH25211(util.F2PyTest): + sources = [util.getpath("tests", "src", "callback", "gh25211.f"), + util.getpath("tests", "src", "callback", "gh25211.pyf")] + module_name = "callback2" + + def test_gh25211(self): + def bar(x): + return x*x + + res = self.module.foo(bar) + assert res == 110 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_character.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_character.py new file mode 100644 index 0000000000000000000000000000000000000000..50e55e1a91cf1d4317d95e4223d16725f90c0c4c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_character.py @@ -0,0 +1,639 @@ +import pytest +import textwrap +from numpy.testing import assert_array_equal, assert_equal, assert_raises +import numpy as np +from numpy.f2py.tests import util + + +@pytest.mark.slow +class TestCharacterString(util.F2PyTest): + # options = ['--debug-capi', '--build-dir', '/tmp/test-build-f2py'] + suffix = '.f90' + fprefix = 'test_character_string' + length_list = ['1', '3', 'star'] + + code = '' + for length in length_list: + fsuffix = length + clength = dict(star='(*)').get(length, length) + + code += textwrap.dedent(f""" + + subroutine {fprefix}_input_{fsuffix}(c, o, n) + character*{clength}, intent(in) :: c + integer n + !f2py integer, depend(c), intent(hide) :: n = slen(c) + integer*1, dimension(n) :: o + !f2py intent(out) o + o = transfer(c, o) + end subroutine {fprefix}_input_{fsuffix} + + subroutine {fprefix}_output_{fsuffix}(c, o, n) + character*{clength}, intent(out) :: c + integer n + integer*1, dimension(n), intent(in) :: o + !f2py integer, depend(o), intent(hide) :: n = len(o) + c = transfer(o, c) + end subroutine {fprefix}_output_{fsuffix} + + subroutine {fprefix}_array_input_{fsuffix}(c, o, m, n) + integer m, i, n + character*{clength}, intent(in), dimension(m) :: c + !f2py integer, depend(c), intent(hide) :: m = len(c) + !f2py integer, depend(c), intent(hide) :: n = f2py_itemsize(c) + integer*1, dimension(m, n), intent(out) :: o + do i=1,m + o(i, :) = transfer(c(i), o(i, :)) + end do + end subroutine {fprefix}_array_input_{fsuffix} + + subroutine {fprefix}_array_output_{fsuffix}(c, o, m, n) + character*{clength}, intent(out), dimension(m) :: c + integer n + integer*1, dimension(m, n), intent(in) :: o + !f2py character(f2py_len=n) :: c + !f2py integer, depend(o), intent(hide) :: m = len(o) + !f2py integer, depend(o), intent(hide) :: n = shape(o, 1) + do i=1,m + c(i) = transfer(o(i, :), c(i)) + end do + end subroutine {fprefix}_array_output_{fsuffix} + + subroutine {fprefix}_2d_array_input_{fsuffix}(c, o, m1, m2, n) + integer m1, m2, i, j, n + character*{clength}, intent(in), dimension(m1, m2) :: c + !f2py integer, depend(c), intent(hide) :: m1 = len(c) + !f2py integer, depend(c), intent(hide) :: m2 = shape(c, 1) + !f2py integer, depend(c), intent(hide) :: n = f2py_itemsize(c) + integer*1, dimension(m1, m2, n), intent(out) :: o + do i=1,m1 + do j=1,m2 + o(i, j, :) = transfer(c(i, j), o(i, j, :)) + end do + end do + end subroutine {fprefix}_2d_array_input_{fsuffix} + """) + + @pytest.mark.parametrize("length", length_list) + def test_input(self, length): + fsuffix = {'(*)': 'star'}.get(length, length) + f = getattr(self.module, self.fprefix + '_input_' + fsuffix) + + a = {'1': 'a', '3': 'abc', 'star': 'abcde' * 3}[length] + + assert_array_equal(f(a), np.array(list(map(ord, a)), dtype='u1')) + + @pytest.mark.parametrize("length", length_list[:-1]) + def test_output(self, length): + fsuffix = length + f = getattr(self.module, self.fprefix + '_output_' + fsuffix) + + a = {'1': 'a', '3': 'abc'}[length] + + assert_array_equal(f(np.array(list(map(ord, a)), dtype='u1')), + a.encode()) + + @pytest.mark.parametrize("length", length_list) + def test_array_input(self, length): + fsuffix = length + f = getattr(self.module, self.fprefix + '_array_input_' + fsuffix) + + a = np.array([{'1': 'a', '3': 'abc', 'star': 'abcde' * 3}[length], + {'1': 'A', '3': 'ABC', 'star': 'ABCDE' * 3}[length], + ], dtype='S') + + expected = np.array([[c for c in s] for s in a], dtype='u1') + assert_array_equal(f(a), expected) + + @pytest.mark.parametrize("length", length_list) + def test_array_output(self, length): + fsuffix = length + f = getattr(self.module, self.fprefix + '_array_output_' + fsuffix) + + expected = np.array( + [{'1': 'a', '3': 'abc', 'star': 'abcde' * 3}[length], + {'1': 'A', '3': 'ABC', 'star': 'ABCDE' * 3}[length]], dtype='S') + + a = np.array([[c for c in s] for s in expected], dtype='u1') + assert_array_equal(f(a), expected) + + @pytest.mark.parametrize("length", length_list) + def test_2d_array_input(self, length): + fsuffix = length + f = getattr(self.module, self.fprefix + '_2d_array_input_' + fsuffix) + + a = np.array([[{'1': 'a', '3': 'abc', 'star': 'abcde' * 3}[length], + {'1': 'A', '3': 'ABC', 'star': 'ABCDE' * 3}[length]], + [{'1': 'f', '3': 'fgh', 'star': 'fghij' * 3}[length], + {'1': 'F', '3': 'FGH', 'star': 'FGHIJ' * 3}[length]]], + dtype='S') + expected = np.array([[[c for c in item] for item in row] for row in a], + dtype='u1', order='F') + assert_array_equal(f(a), expected) + + +class TestCharacter(util.F2PyTest): + # options = ['--debug-capi', '--build-dir', '/tmp/test-build-f2py'] + suffix = '.f90' + fprefix = 'test_character' + + code = textwrap.dedent(f""" + subroutine {fprefix}_input(c, o) + character, intent(in) :: c + integer*1 o + !f2py intent(out) o + o = transfer(c, o) + end subroutine {fprefix}_input + + subroutine {fprefix}_output(c, o) + character :: c + integer*1, intent(in) :: o + !f2py intent(out) c + c = transfer(o, c) + end subroutine {fprefix}_output + + subroutine {fprefix}_input_output(c, o) + character, intent(in) :: c + character o + !f2py intent(out) o + o = c + end subroutine {fprefix}_input_output + + subroutine {fprefix}_inout(c, n) + character :: c, n + !f2py intent(in) n + !f2py intent(inout) c + c = n + end subroutine {fprefix}_inout + + function {fprefix}_return(o) result (c) + character :: c + character, intent(in) :: o + c = transfer(o, c) + end function {fprefix}_return + + subroutine {fprefix}_array_input(c, o) + character, intent(in) :: c(3) + integer*1 o(3) + !f2py intent(out) o + integer i + do i=1,3 + o(i) = transfer(c(i), o(i)) + end do + end subroutine {fprefix}_array_input + + subroutine {fprefix}_2d_array_input(c, o) + character, intent(in) :: c(2, 3) + integer*1 o(2, 3) + !f2py intent(out) o + integer i, j + do i=1,2 + do j=1,3 + o(i, j) = transfer(c(i, j), o(i, j)) + end do + end do + end subroutine {fprefix}_2d_array_input + + subroutine {fprefix}_array_output(c, o) + character :: c(3) + integer*1, intent(in) :: o(3) + !f2py intent(out) c + do i=1,3 + c(i) = transfer(o(i), c(i)) + end do + end subroutine {fprefix}_array_output + + subroutine {fprefix}_array_inout(c, n) + character :: c(3), n(3) + !f2py intent(in) n(3) + !f2py intent(inout) c(3) + do i=1,3 + c(i) = n(i) + end do + end subroutine {fprefix}_array_inout + + subroutine {fprefix}_2d_array_inout(c, n) + character :: c(2, 3), n(2, 3) + !f2py intent(in) n(2, 3) + !f2py intent(inout) c(2. 3) + integer i, j + do i=1,2 + do j=1,3 + c(i, j) = n(i, j) + end do + end do + end subroutine {fprefix}_2d_array_inout + + function {fprefix}_array_return(o) result (c) + character, dimension(3) :: c + character, intent(in) :: o(3) + do i=1,3 + c(i) = o(i) + end do + end function {fprefix}_array_return + + function {fprefix}_optional(o) result (c) + character, intent(in) :: o + !f2py character o = "a" + character :: c + c = o + end function {fprefix}_optional + """) + + @pytest.mark.parametrize("dtype", ['c', 'S1']) + def test_input(self, dtype): + f = getattr(self.module, self.fprefix + '_input') + + assert_equal(f(np.array('a', dtype=dtype)), ord('a')) + assert_equal(f(np.array(b'a', dtype=dtype)), ord('a')) + assert_equal(f(np.array(['a'], dtype=dtype)), ord('a')) + assert_equal(f(np.array('abc', dtype=dtype)), ord('a')) + assert_equal(f(np.array([['a']], dtype=dtype)), ord('a')) + + def test_input_varia(self): + f = getattr(self.module, self.fprefix + '_input') + + assert_equal(f('a'), ord('a')) + assert_equal(f(b'a'), ord(b'a')) + assert_equal(f(''), 0) + assert_equal(f(b''), 0) + assert_equal(f(b'\0'), 0) + assert_equal(f('ab'), ord('a')) + assert_equal(f(b'ab'), ord('a')) + assert_equal(f(['a']), ord('a')) + + assert_equal(f(np.array(b'a')), ord('a')) + assert_equal(f(np.array([b'a'])), ord('a')) + a = np.array('a') + assert_equal(f(a), ord('a')) + a = np.array(['a']) + assert_equal(f(a), ord('a')) + + try: + f([]) + except IndexError as msg: + if not str(msg).endswith(' got 0-list'): + raise + else: + raise SystemError(f'{f.__name__} should have failed on empty list') + + try: + f(97) + except TypeError as msg: + if not str(msg).endswith(' got int instance'): + raise + else: + raise SystemError(f'{f.__name__} should have failed on int value') + + @pytest.mark.parametrize("dtype", ['c', 'S1', 'U1']) + def test_array_input(self, dtype): + f = getattr(self.module, self.fprefix + '_array_input') + + assert_array_equal(f(np.array(['a', 'b', 'c'], dtype=dtype)), + np.array(list(map(ord, 'abc')), dtype='i1')) + assert_array_equal(f(np.array([b'a', b'b', b'c'], dtype=dtype)), + np.array(list(map(ord, 'abc')), dtype='i1')) + + def test_array_input_varia(self): + f = getattr(self.module, self.fprefix + '_array_input') + assert_array_equal(f(['a', 'b', 'c']), + np.array(list(map(ord, 'abc')), dtype='i1')) + assert_array_equal(f([b'a', b'b', b'c']), + np.array(list(map(ord, 'abc')), dtype='i1')) + + try: + f(['a', 'b', 'c', 'd']) + except ValueError as msg: + if not str(msg).endswith( + 'th dimension must be fixed to 3 but got 4'): + raise + else: + raise SystemError( + f'{f.__name__} should have failed on wrong input') + + @pytest.mark.parametrize("dtype", ['c', 'S1', 'U1']) + def test_2d_array_input(self, dtype): + f = getattr(self.module, self.fprefix + '_2d_array_input') + + a = np.array([['a', 'b', 'c'], + ['d', 'e', 'f']], dtype=dtype, order='F') + expected = a.view(np.uint32 if dtype == 'U1' else np.uint8) + assert_array_equal(f(a), expected) + + def test_output(self): + f = getattr(self.module, self.fprefix + '_output') + + assert_equal(f(ord(b'a')), b'a') + assert_equal(f(0), b'\0') + + def test_array_output(self): + f = getattr(self.module, self.fprefix + '_array_output') + + assert_array_equal(f(list(map(ord, 'abc'))), + np.array(list('abc'), dtype='S1')) + + def test_input_output(self): + f = getattr(self.module, self.fprefix + '_input_output') + + assert_equal(f(b'a'), b'a') + assert_equal(f('a'), b'a') + assert_equal(f(''), b'\0') + + @pytest.mark.parametrize("dtype", ['c', 'S1']) + def test_inout(self, dtype): + f = getattr(self.module, self.fprefix + '_inout') + + a = np.array(list('abc'), dtype=dtype) + f(a, 'A') + assert_array_equal(a, np.array(list('Abc'), dtype=a.dtype)) + f(a[1:], 'B') + assert_array_equal(a, np.array(list('ABc'), dtype=a.dtype)) + + a = np.array(['abc'], dtype=dtype) + f(a, 'A') + assert_array_equal(a, np.array(['Abc'], dtype=a.dtype)) + + def test_inout_varia(self): + f = getattr(self.module, self.fprefix + '_inout') + a = np.array('abc', dtype='S3') + f(a, 'A') + assert_array_equal(a, np.array('Abc', dtype=a.dtype)) + + a = np.array(['abc'], dtype='S3') + f(a, 'A') + assert_array_equal(a, np.array(['Abc'], dtype=a.dtype)) + + try: + f('abc', 'A') + except ValueError as msg: + if not str(msg).endswith(' got 3-str'): + raise + else: + raise SystemError(f'{f.__name__} should have failed on str value') + + @pytest.mark.parametrize("dtype", ['c', 'S1']) + def test_array_inout(self, dtype): + f = getattr(self.module, self.fprefix + '_array_inout') + n = np.array(['A', 'B', 'C'], dtype=dtype, order='F') + + a = np.array(['a', 'b', 'c'], dtype=dtype, order='F') + f(a, n) + assert_array_equal(a, n) + + a = np.array(['a', 'b', 'c', 'd'], dtype=dtype) + f(a[1:], n) + assert_array_equal(a, np.array(['a', 'A', 'B', 'C'], dtype=dtype)) + + a = np.array([['a', 'b', 'c']], dtype=dtype, order='F') + f(a, n) + assert_array_equal(a, np.array([['A', 'B', 'C']], dtype=dtype)) + + a = np.array(['a', 'b', 'c', 'd'], dtype=dtype, order='F') + try: + f(a, n) + except ValueError as msg: + if not str(msg).endswith( + 'th dimension must be fixed to 3 but got 4'): + raise + else: + raise SystemError( + f'{f.__name__} should have failed on wrong input') + + @pytest.mark.parametrize("dtype", ['c', 'S1']) + def test_2d_array_inout(self, dtype): + f = getattr(self.module, self.fprefix + '_2d_array_inout') + n = np.array([['A', 'B', 'C'], + ['D', 'E', 'F']], + dtype=dtype, order='F') + a = np.array([['a', 'b', 'c'], + ['d', 'e', 'f']], + dtype=dtype, order='F') + f(a, n) + assert_array_equal(a, n) + + def test_return(self): + f = getattr(self.module, self.fprefix + '_return') + + assert_equal(f('a'), b'a') + + @pytest.mark.skip('fortran function returning array segfaults') + def test_array_return(self): + f = getattr(self.module, self.fprefix + '_array_return') + + a = np.array(list('abc'), dtype='S1') + assert_array_equal(f(a), a) + + def test_optional(self): + f = getattr(self.module, self.fprefix + '_optional') + + assert_equal(f(), b"a") + assert_equal(f(b'B'), b"B") + + +class TestMiscCharacter(util.F2PyTest): + # options = ['--debug-capi', '--build-dir', '/tmp/test-build-f2py'] + suffix = '.f90' + fprefix = 'test_misc_character' + + code = textwrap.dedent(f""" + subroutine {fprefix}_gh18684(x, y, m) + character(len=5), dimension(m), intent(in) :: x + character*5, dimension(m), intent(out) :: y + integer i, m + !f2py integer, intent(hide), depend(x) :: m = f2py_len(x) + do i=1,m + y(i) = x(i) + end do + end subroutine {fprefix}_gh18684 + + subroutine {fprefix}_gh6308(x, i) + integer i + !f2py check(i>=0 && i<12) i + character*5 name, x + common name(12) + name(i + 1) = x + end subroutine {fprefix}_gh6308 + + subroutine {fprefix}_gh4519(x) + character(len=*), intent(in) :: x(:) + !f2py intent(out) x + integer :: i + ! Uncomment for debug printing: + !do i=1, size(x) + ! print*, "x(",i,")=", x(i) + !end do + end subroutine {fprefix}_gh4519 + + pure function {fprefix}_gh3425(x) result (y) + character(len=*), intent(in) :: x + character(len=len(x)) :: y + integer :: i + do i = 1, len(x) + j = iachar(x(i:i)) + if (j>=iachar("a") .and. j<=iachar("z") ) then + y(i:i) = achar(j-32) + else + y(i:i) = x(i:i) + endif + end do + end function {fprefix}_gh3425 + + subroutine {fprefix}_character_bc_new(x, y, z) + character, intent(in) :: x + character, intent(out) :: y + !f2py character, depend(x) :: y = x + !f2py character, dimension((x=='a'?1:2)), depend(x), intent(out) :: z + character, dimension(*) :: z + !f2py character, optional, check(x == 'a' || x == 'b') :: x = 'a' + !f2py callstatement (*f2py_func)(&x, &y, z) + !f2py callprotoargument character*, character*, character* + if (y.eq.x) then + y = x + else + y = 'e' + endif + z(1) = 'c' + end subroutine {fprefix}_character_bc_new + + subroutine {fprefix}_character_bc_old(x, y, z) + character, intent(in) :: x + character, intent(out) :: y + !f2py character, depend(x) :: y = x[0] + !f2py character, dimension((*x=='a'?1:2)), depend(x), intent(out) :: z + character, dimension(*) :: z + !f2py character, optional, check(*x == 'a' || x[0] == 'b') :: x = 'a' + !f2py callstatement (*f2py_func)(x, y, z) + !f2py callprotoargument char*, char*, char* + if (y.eq.x) then + y = x + else + y = 'e' + endif + z(1) = 'c' + end subroutine {fprefix}_character_bc_old + """) + + @pytest.mark.slow + def test_gh18684(self): + # Test character(len=5) and character*5 usages + f = getattr(self.module, self.fprefix + '_gh18684') + x = np.array(["abcde", "fghij"], dtype='S5') + y = f(x) + + assert_array_equal(x, y) + + def test_gh6308(self): + # Test character string array in a common block + f = getattr(self.module, self.fprefix + '_gh6308') + + assert_equal(self.module._BLNK_.name.dtype, np.dtype('S5')) + assert_equal(len(self.module._BLNK_.name), 12) + f("abcde", 0) + assert_equal(self.module._BLNK_.name[0], b"abcde") + f("12345", 5) + assert_equal(self.module._BLNK_.name[5], b"12345") + + def test_gh4519(self): + # Test array of assumed length strings + f = getattr(self.module, self.fprefix + '_gh4519') + + for x, expected in [ + ('a', dict(shape=(), dtype=np.dtype('S1'))), + ('text', dict(shape=(), dtype=np.dtype('S4'))), + (np.array(['1', '2', '3'], dtype='S1'), + dict(shape=(3,), dtype=np.dtype('S1'))), + (['1', '2', '34'], + dict(shape=(3,), dtype=np.dtype('S2'))), + (['', ''], dict(shape=(2,), dtype=np.dtype('S1')))]: + r = f(x) + for k, v in expected.items(): + assert_equal(getattr(r, k), v) + + def test_gh3425(self): + # Test returning a copy of assumed length string + f = getattr(self.module, self.fprefix + '_gh3425') + # f is equivalent to bytes.upper + + assert_equal(f('abC'), b'ABC') + assert_equal(f(''), b'') + assert_equal(f('abC12d'), b'ABC12D') + + @pytest.mark.parametrize("state", ['new', 'old']) + def test_character_bc(self, state): + f = getattr(self.module, self.fprefix + '_character_bc_' + state) + + c, a = f() + assert_equal(c, b'a') + assert_equal(len(a), 1) + + c, a = f(b'b') + assert_equal(c, b'b') + assert_equal(len(a), 2) + + assert_raises(Exception, lambda: f(b'c')) + + +class TestStringScalarArr(util.F2PyTest): + sources = [util.getpath("tests", "src", "string", "scalar_string.f90")] + + def test_char(self): + for out in (self.module.string_test.string, + self.module.string_test.string77): + expected = () + assert out.shape == expected + expected = '|S8' + assert out.dtype == expected + + def test_char_arr(self): + for out in (self.module.string_test.strarr, + self.module.string_test.strarr77): + expected = (5,7) + assert out.shape == expected + expected = '|S12' + assert out.dtype == expected + +class TestStringAssumedLength(util.F2PyTest): + sources = [util.getpath("tests", "src", "string", "gh24008.f")] + + def test_gh24008(self): + self.module.greet("joe", "bob") + +@pytest.mark.slow +class TestStringOptionalInOut(util.F2PyTest): + sources = [util.getpath("tests", "src", "string", "gh24662.f90")] + + def test_gh24662(self): + self.module.string_inout_optional() + a = np.array('hi', dtype='S32') + self.module.string_inout_optional(a) + assert "output string" in a.tobytes().decode() + with pytest.raises(Exception): + aa = "Hi" + self.module.string_inout_optional(aa) + + +@pytest.mark.slow +class TestNewCharHandling(util.F2PyTest): + # from v1.24 onwards, gh-19388 + sources = [ + util.getpath("tests", "src", "string", "gh25286.pyf"), + util.getpath("tests", "src", "string", "gh25286.f90") + ] + module_name = "_char_handling_test" + + def test_gh25286(self): + info = self.module.charint('T') + assert info == 2 + +@pytest.mark.slow +class TestBCCharHandling(util.F2PyTest): + # SciPy style, "incorrect" bindings with a hook + sources = [ + util.getpath("tests", "src", "string", "gh25286_bc.pyf"), + util.getpath("tests", "src", "string", "gh25286.f90") + ] + module_name = "_char_handling_test" + + def test_gh25286(self): + info = self.module.charint('T') + assert info == 2 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_common.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_common.py new file mode 100644 index 0000000000000000000000000000000000000000..09bd6147f0f3e72fb0eaca4c9e60d8be2b5b2b57 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_common.py @@ -0,0 +1,20 @@ +import pytest +import numpy as np +from . import util + +@pytest.mark.slow +class TestCommonBlock(util.F2PyTest): + sources = [util.getpath("tests", "src", "common", "block.f")] + + def test_common_block(self): + self.module.initcb() + assert self.module.block.long_bn == np.array(1.0, dtype=np.float64) + assert self.module.block.string_bn == np.array("2", dtype="|S1") + assert self.module.block.ok == np.array(3, dtype=np.int32) + + +class TestCommonWithUse(util.F2PyTest): + sources = [util.getpath("tests", "src", "common", "gh19161.f90")] + + def test_common_gh19161(self): + assert self.module.data.x == 0 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_crackfortran.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_crackfortran.py new file mode 100644 index 0000000000000000000000000000000000000000..1caa4147c2d74bcfabb0cc39e321b87afe3fc738 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_crackfortran.py @@ -0,0 +1,407 @@ +import importlib +import codecs +import time +import unicodedata +import pytest +import numpy as np +from numpy.f2py.crackfortran import markinnerspaces, nameargspattern +from . import util +from numpy.f2py import crackfortran +import textwrap +import contextlib +import io + + +class TestNoSpace(util.F2PyTest): + # issue gh-15035: add handling for endsubroutine, endfunction with no space + # between "end" and the block name + sources = [util.getpath("tests", "src", "crackfortran", "gh15035.f")] + + def test_module(self): + k = np.array([1, 2, 3], dtype=np.float64) + w = np.array([1, 2, 3], dtype=np.float64) + self.module.subb(k) + assert np.allclose(k, w + 1) + self.module.subc([w, k]) + assert np.allclose(k, w + 1) + assert self.module.t0("23") == b"2" + + +class TestPublicPrivate: + def test_defaultPrivate(self): + fpath = util.getpath("tests", "src", "crackfortran", "privatemod.f90") + mod = crackfortran.crackfortran([str(fpath)]) + assert len(mod) == 1 + mod = mod[0] + assert "private" in mod["vars"]["a"]["attrspec"] + assert "public" not in mod["vars"]["a"]["attrspec"] + assert "private" in mod["vars"]["b"]["attrspec"] + assert "public" not in mod["vars"]["b"]["attrspec"] + assert "private" not in mod["vars"]["seta"]["attrspec"] + assert "public" in mod["vars"]["seta"]["attrspec"] + + def test_defaultPublic(self, tmp_path): + fpath = util.getpath("tests", "src", "crackfortran", "publicmod.f90") + mod = crackfortran.crackfortran([str(fpath)]) + assert len(mod) == 1 + mod = mod[0] + assert "private" in mod["vars"]["a"]["attrspec"] + assert "public" not in mod["vars"]["a"]["attrspec"] + assert "private" not in mod["vars"]["seta"]["attrspec"] + assert "public" in mod["vars"]["seta"]["attrspec"] + + def test_access_type(self, tmp_path): + fpath = util.getpath("tests", "src", "crackfortran", "accesstype.f90") + mod = crackfortran.crackfortran([str(fpath)]) + assert len(mod) == 1 + tt = mod[0]['vars'] + assert set(tt['a']['attrspec']) == {'private', 'bind(c)'} + assert set(tt['b_']['attrspec']) == {'public', 'bind(c)'} + assert set(tt['c']['attrspec']) == {'public'} + + def test_nowrap_private_proceedures(self, tmp_path): + fpath = util.getpath("tests", "src", "crackfortran", "gh23879.f90") + mod = crackfortran.crackfortran([str(fpath)]) + assert len(mod) == 1 + pyf = crackfortran.crack2fortran(mod) + assert 'bar' not in pyf + +class TestModuleProcedure(): + def test_moduleOperators(self, tmp_path): + fpath = util.getpath("tests", "src", "crackfortran", "operators.f90") + mod = crackfortran.crackfortran([str(fpath)]) + assert len(mod) == 1 + mod = mod[0] + assert "body" in mod and len(mod["body"]) == 9 + assert mod["body"][1]["name"] == "operator(.item.)" + assert "implementedby" in mod["body"][1] + assert mod["body"][1]["implementedby"] == \ + ["item_int", "item_real"] + assert mod["body"][2]["name"] == "operator(==)" + assert "implementedby" in mod["body"][2] + assert mod["body"][2]["implementedby"] == ["items_are_equal"] + assert mod["body"][3]["name"] == "assignment(=)" + assert "implementedby" in mod["body"][3] + assert mod["body"][3]["implementedby"] == \ + ["get_int", "get_real"] + + def test_notPublicPrivate(self, tmp_path): + fpath = util.getpath("tests", "src", "crackfortran", "pubprivmod.f90") + mod = crackfortran.crackfortran([str(fpath)]) + assert len(mod) == 1 + mod = mod[0] + assert mod['vars']['a']['attrspec'] == ['private', ] + assert mod['vars']['b']['attrspec'] == ['public', ] + assert mod['vars']['seta']['attrspec'] == ['public', ] + + +class TestExternal(util.F2PyTest): + # issue gh-17859: add external attribute support + sources = [util.getpath("tests", "src", "crackfortran", "gh17859.f")] + + def test_external_as_statement(self): + def incr(x): + return x + 123 + + r = self.module.external_as_statement(incr) + assert r == 123 + + def test_external_as_attribute(self): + def incr(x): + return x + 123 + + r = self.module.external_as_attribute(incr) + assert r == 123 + + +class TestCrackFortran(util.F2PyTest): + # gh-2848: commented lines between parameters in subroutine parameter lists + sources = [util.getpath("tests", "src", "crackfortran", "gh2848.f90")] + + def test_gh2848(self): + r = self.module.gh2848(1, 2) + assert r == (1, 2) + + +class TestMarkinnerspaces: + # gh-14118: markinnerspaces does not handle multiple quotations + + def test_do_not_touch_normal_spaces(self): + test_list = ["a ", " a", "a b c", "'abcdefghij'"] + for i in test_list: + assert markinnerspaces(i) == i + + def test_one_relevant_space(self): + assert markinnerspaces("a 'b c' \\' \\'") == "a 'b@_@c' \\' \\'" + assert markinnerspaces(r'a "b c" \" \"') == r'a "b@_@c" \" \"' + + def test_ignore_inner_quotes(self): + assert markinnerspaces("a 'b c\" \" d' e") == "a 'b@_@c\"@_@\"@_@d' e" + assert markinnerspaces("a \"b c' ' d\" e") == "a \"b@_@c'@_@'@_@d\" e" + + def test_multiple_relevant_spaces(self): + assert markinnerspaces("a 'b c' 'd e'") == "a 'b@_@c' 'd@_@e'" + assert markinnerspaces(r'a "b c" "d e"') == r'a "b@_@c" "d@_@e"' + + +class TestDimSpec(util.F2PyTest): + """This test suite tests various expressions that are used as dimension + specifications. + + There exists two usage cases where analyzing dimensions + specifications are important. + + In the first case, the size of output arrays must be defined based + on the inputs to a Fortran function. Because Fortran supports + arbitrary bases for indexing, for instance, `arr(lower:upper)`, + f2py has to evaluate an expression `upper - lower + 1` where + `lower` and `upper` are arbitrary expressions of input parameters. + The evaluation is performed in C, so f2py has to translate Fortran + expressions to valid C expressions (an alternative approach is + that a developer specifies the corresponding C expressions in a + .pyf file). + + In the second case, when user provides an input array with a given + size but some hidden parameters used in dimensions specifications + need to be determined based on the input array size. This is a + harder problem because f2py has to solve the inverse problem: find + a parameter `p` such that `upper(p) - lower(p) + 1` equals to the + size of input array. In the case when this equation cannot be + solved (e.g. because the input array size is wrong), raise an + error before calling the Fortran function (that otherwise would + likely crash Python process when the size of input arrays is + wrong). f2py currently supports this case only when the equation + is linear with respect to unknown parameter. + + """ + + suffix = ".f90" + + code_template = textwrap.dedent(""" + function get_arr_size_{count}(a, n) result (length) + integer, intent(in) :: n + integer, dimension({dimspec}), intent(out) :: a + integer length + length = size(a) + end function + + subroutine get_inv_arr_size_{count}(a, n) + integer :: n + ! the value of n is computed in f2py wrapper + !f2py intent(out) n + integer, dimension({dimspec}), intent(in) :: a + if (a({first}).gt.0) then + ! print*, "a=", a + endif + end subroutine + """) + + linear_dimspecs = [ + "n", "2*n", "2:n", "n/2", "5 - n/2", "3*n:20", "n*(n+1):n*(n+5)", + "2*n, n" + ] + nonlinear_dimspecs = ["2*n:3*n*n+2*n"] + all_dimspecs = linear_dimspecs + nonlinear_dimspecs + + code = "" + for count, dimspec in enumerate(all_dimspecs): + lst = [(d.split(":")[0] if ":" in d else "1") for d in dimspec.split(',')] + code += code_template.format( + count=count, + dimspec=dimspec, + first=", ".join(lst), + ) + + @pytest.mark.parametrize("dimspec", all_dimspecs) + @pytest.mark.slow + def test_array_size(self, dimspec): + + count = self.all_dimspecs.index(dimspec) + get_arr_size = getattr(self.module, f"get_arr_size_{count}") + + for n in [1, 2, 3, 4, 5]: + sz, a = get_arr_size(n) + assert a.size == sz + + @pytest.mark.parametrize("dimspec", all_dimspecs) + def test_inv_array_size(self, dimspec): + + count = self.all_dimspecs.index(dimspec) + get_arr_size = getattr(self.module, f"get_arr_size_{count}") + get_inv_arr_size = getattr(self.module, f"get_inv_arr_size_{count}") + + for n in [1, 2, 3, 4, 5]: + sz, a = get_arr_size(n) + if dimspec in self.nonlinear_dimspecs: + # one must specify n as input, the call we'll ensure + # that a and n are compatible: + n1 = get_inv_arr_size(a, n) + else: + # in case of linear dependence, n can be determined + # from the shape of a: + n1 = get_inv_arr_size(a) + # n1 may be different from n (for instance, when `a` size + # is a function of some `n` fraction) but it must produce + # the same sized array + sz1, _ = get_arr_size(n1) + assert sz == sz1, (n, n1, sz, sz1) + + +class TestModuleDeclaration: + def test_dependencies(self, tmp_path): + fpath = util.getpath("tests", "src", "crackfortran", "foo_deps.f90") + mod = crackfortran.crackfortran([str(fpath)]) + assert len(mod) == 1 + assert mod[0]["vars"]["abar"]["="] == "bar('abar')" + + +class TestEval(util.F2PyTest): + def test_eval_scalar(self): + eval_scalar = crackfortran._eval_scalar + + assert eval_scalar('123', {}) == '123' + assert eval_scalar('12 + 3', {}) == '15' + assert eval_scalar('a + b', dict(a=1, b=2)) == '3' + assert eval_scalar('"123"', {}) == "'123'" + + +class TestFortranReader(util.F2PyTest): + @pytest.mark.parametrize("encoding", + ['ascii', 'utf-8', 'utf-16', 'utf-32']) + def test_input_encoding(self, tmp_path, encoding): + # gh-635 + f_path = tmp_path / f"input_with_{encoding}_encoding.f90" + with f_path.open('w', encoding=encoding) as ff: + ff.write(""" + subroutine foo() + end subroutine foo + """) + mod = crackfortran.crackfortran([str(f_path)]) + assert mod[0]['name'] == 'foo' + + +@pytest.mark.slow +class TestUnicodeComment(util.F2PyTest): + sources = [util.getpath("tests", "src", "crackfortran", "unicode_comment.f90")] + + @pytest.mark.skipif( + (importlib.util.find_spec("charset_normalizer") is None), + reason="test requires charset_normalizer which is not installed", + ) + def test_encoding_comment(self): + self.module.foo(3) + + +class TestNameArgsPatternBacktracking: + @pytest.mark.parametrize( + ['adversary'], + [ + ('@)@bind@(@',), + ('@)@bind @(@',), + ('@)@bind foo bar baz@(@',) + ] + ) + def test_nameargspattern_backtracking(self, adversary): + '''address ReDOS vulnerability: + https://github.com/numpy/numpy/issues/23338''' + trials_per_batch = 12 + batches_per_regex = 4 + start_reps, end_reps = 15, 25 + for ii in range(start_reps, end_reps): + repeated_adversary = adversary * ii + # test times in small batches. + # this gives us more chances to catch a bad regex + # while still catching it before too long if it is bad + for _ in range(batches_per_regex): + times = [] + for _ in range(trials_per_batch): + t0 = time.perf_counter() + mtch = nameargspattern.search(repeated_adversary) + times.append(time.perf_counter() - t0) + # our pattern should be much faster than 0.2s per search + # it's unlikely that a bad regex will pass even on fast CPUs + assert np.median(times) < 0.2 + assert not mtch + # if the adversary is capped with @)@, it becomes acceptable + # according to the old version of the regex. + # that should still be true. + good_version_of_adversary = repeated_adversary + '@)@' + assert nameargspattern.search(good_version_of_adversary) + +class TestFunctionReturn(util.F2PyTest): + sources = [util.getpath("tests", "src", "crackfortran", "gh23598.f90")] + + @pytest.mark.slow + def test_function_rettype(self): + # gh-23598 + assert self.module.intproduct(3, 4) == 12 + + +class TestFortranGroupCounters(util.F2PyTest): + def test_end_if_comment(self): + # gh-23533 + fpath = util.getpath("tests", "src", "crackfortran", "gh23533.f") + try: + crackfortran.crackfortran([str(fpath)]) + except Exception as exc: + assert False, f"'crackfortran.crackfortran' raised an exception {exc}" + + +class TestF77CommonBlockReader(): + def test_gh22648(self, tmp_path): + fpath = util.getpath("tests", "src", "crackfortran", "gh22648.pyf") + with contextlib.redirect_stdout(io.StringIO()) as stdout_f2py: + mod = crackfortran.crackfortran([str(fpath)]) + assert "Mismatch" not in stdout_f2py.getvalue() + +class TestParamEval(): + # issue gh-11612, array parameter parsing + def test_param_eval_nested(self): + v = '(/3.14, 4./)' + g_params = dict(kind=crackfortran._kind_func, + selected_int_kind=crackfortran._selected_int_kind_func, + selected_real_kind=crackfortran._selected_real_kind_func) + params = {'dp': 8, 'intparamarray': {1: 3, 2: 5}, + 'nested': {1: 1, 2: 2, 3: 3}} + dimspec = '(2)' + ret = crackfortran.param_eval(v, g_params, params, dimspec=dimspec) + assert ret == {1: 3.14, 2: 4.0} + + def test_param_eval_nonstandard_range(self): + v = '(/ 6, 3, 1 /)' + g_params = dict(kind=crackfortran._kind_func, + selected_int_kind=crackfortran._selected_int_kind_func, + selected_real_kind=crackfortran._selected_real_kind_func) + params = {} + dimspec = '(-1:1)' + ret = crackfortran.param_eval(v, g_params, params, dimspec=dimspec) + assert ret == {-1: 6, 0: 3, 1: 1} + + def test_param_eval_empty_range(self): + v = '6' + g_params = dict(kind=crackfortran._kind_func, + selected_int_kind=crackfortran._selected_int_kind_func, + selected_real_kind=crackfortran._selected_real_kind_func) + params = {} + dimspec = '' + pytest.raises(ValueError, crackfortran.param_eval, v, g_params, params, + dimspec=dimspec) + + def test_param_eval_non_array_param(self): + v = '3.14_dp' + g_params = dict(kind=crackfortran._kind_func, + selected_int_kind=crackfortran._selected_int_kind_func, + selected_real_kind=crackfortran._selected_real_kind_func) + params = {} + ret = crackfortran.param_eval(v, g_params, params, dimspec=None) + assert ret == '3.14_dp' + + def test_param_eval_too_many_dims(self): + v = 'reshape((/ (i, i=1, 250) /), (/5, 10, 5/))' + g_params = dict(kind=crackfortran._kind_func, + selected_int_kind=crackfortran._selected_int_kind_func, + selected_real_kind=crackfortran._selected_real_kind_func) + params = {} + dimspec = '(0:4, 3:12, 5)' + pytest.raises(ValueError, crackfortran.param_eval, v, g_params, params, + dimspec=dimspec) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_data.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_data.py new file mode 100644 index 0000000000000000000000000000000000000000..5af5c40447d3ab2201b6707056d067ba47228e20 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_data.py @@ -0,0 +1,71 @@ +import os +import pytest +import numpy as np + +from . import util +from numpy.f2py.crackfortran import crackfortran + + +class TestData(util.F2PyTest): + sources = [util.getpath("tests", "src", "crackfortran", "data_stmts.f90")] + + # For gh-23276 + @pytest.mark.slow + def test_data_stmts(self): + assert self.module.cmplxdat.i == 2 + assert self.module.cmplxdat.j == 3 + assert self.module.cmplxdat.x == 1.5 + assert self.module.cmplxdat.y == 2.0 + assert self.module.cmplxdat.pi == 3.1415926535897932384626433832795028841971693993751058209749445923078164062 + assert self.module.cmplxdat.medium_ref_index == np.array(1.+0.j) + assert np.all(self.module.cmplxdat.z == np.array([3.5, 7.0])) + assert np.all(self.module.cmplxdat.my_array == np.array([ 1.+2.j, -3.+4.j])) + assert np.all(self.module.cmplxdat.my_real_array == np.array([ 1., 2., 3.])) + assert np.all(self.module.cmplxdat.ref_index_one == np.array([13.0 + 21.0j])) + assert np.all(self.module.cmplxdat.ref_index_two == np.array([-30.0 + 43.0j])) + + def test_crackedlines(self): + mod = crackfortran(self.sources) + assert mod[0]['vars']['x']['='] == '1.5' + assert mod[0]['vars']['y']['='] == '2.0' + assert mod[0]['vars']['pi']['='] == '3.1415926535897932384626433832795028841971693993751058209749445923078164062d0' + assert mod[0]['vars']['my_real_array']['='] == '(/1.0d0, 2.0d0, 3.0d0/)' + assert mod[0]['vars']['ref_index_one']['='] == '(13.0d0, 21.0d0)' + assert mod[0]['vars']['ref_index_two']['='] == '(-30.0d0, 43.0d0)' + assert mod[0]['vars']['my_array']['='] == '(/(1.0d0, 2.0d0), (-3.0d0, 4.0d0)/)' + assert mod[0]['vars']['z']['='] == '(/3.5, 7.0/)' + +class TestDataF77(util.F2PyTest): + sources = [util.getpath("tests", "src", "crackfortran", "data_common.f")] + + # For gh-23276 + def test_data_stmts(self): + assert self.module.mycom.mydata == 0 + + def test_crackedlines(self): + mod = crackfortran(str(self.sources[0])) + print(mod[0]['vars']) + assert mod[0]['vars']['mydata']['='] == '0' + + +class TestDataMultiplierF77(util.F2PyTest): + sources = [util.getpath("tests", "src", "crackfortran", "data_multiplier.f")] + + # For gh-23276 + def test_data_stmts(self): + assert self.module.mycom.ivar1 == 3 + assert self.module.mycom.ivar2 == 3 + assert self.module.mycom.ivar3 == 2 + assert self.module.mycom.ivar4 == 2 + assert self.module.mycom.evar5 == 0 + + +class TestDataWithCommentsF77(util.F2PyTest): + sources = [util.getpath("tests", "src", "crackfortran", "data_with_comments.f")] + + # For gh-23276 + def test_data_stmts(self): + assert len(self.module.mycom.mytab) == 3 + assert self.module.mycom.mytab[0] == 0 + assert self.module.mycom.mytab[1] == 4 + assert self.module.mycom.mytab[2] == 0 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_docs.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_docs.py new file mode 100644 index 0000000000000000000000000000000000000000..55540a9c7d199f2fd7f1db269054e62a05129dde --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_docs.py @@ -0,0 +1,59 @@ +import pytest +import numpy as np +from numpy.testing import assert_array_equal, assert_equal +from . import util +from pathlib import Path + +def get_docdir(): + parents = Path(__file__).resolve().parents + try: + # Assumes that spin is used to run tests + nproot = parents[8] + except IndexError: + docdir = None + else: + docdir = nproot / "doc" / "source" / "f2py" / "code" + if docdir and docdir.is_dir(): + return docdir + # Assumes that an editable install is used to run tests + return parents[3] / "doc" / "source" / "f2py" / "code" + +pytestmark = pytest.mark.skipif( + not get_docdir().is_dir(), + reason=f"Could not find f2py documentation sources" + f"({get_docdir()} does not exist)", +) + +def _path(*args): + return get_docdir().joinpath(*args) + +@pytest.mark.slow +class TestDocAdvanced(util.F2PyTest): + # options = ['--debug-capi', '--build-dir', '/tmp/build-f2py'] + sources = [_path('asterisk1.f90'), _path('asterisk2.f90'), + _path('ftype.f')] + + def test_asterisk1(self): + foo = getattr(self.module, 'foo1') + assert_equal(foo(), b'123456789A12') + + def test_asterisk2(self): + foo = getattr(self.module, 'foo2') + assert_equal(foo(2), b'12') + assert_equal(foo(12), b'123456789A12') + assert_equal(foo(20), b'123456789A123456789B') + + def test_ftype(self): + ftype = self.module + ftype.foo() + assert_equal(ftype.data.a, 0) + ftype.data.a = 3 + ftype.data.x = [1, 2, 3] + assert_equal(ftype.data.a, 3) + assert_array_equal(ftype.data.x, + np.array([1, 2, 3], dtype=np.float32)) + ftype.data.x[1] = 45 + assert_array_equal(ftype.data.x, + np.array([1, 45, 3], dtype=np.float32)) + + # TODO: implement test methods for other example Fortran codes diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_f2cmap.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_f2cmap.py new file mode 100644 index 0000000000000000000000000000000000000000..6596ada33a5454398427f3b605862dd1bae9cab4 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_f2cmap.py @@ -0,0 +1,15 @@ +from . import util +import numpy as np + +class TestF2Cmap(util.F2PyTest): + sources = [ + util.getpath("tests", "src", "f2cmap", "isoFortranEnvMap.f90"), + util.getpath("tests", "src", "f2cmap", ".f2py_f2cmap") + ] + + # gh-15095 + def test_gh15095(self): + inp = np.ones(3) + out = self.module.func1(inp) + exp_out = 3 + assert out == exp_out diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_f2py2e.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_f2py2e.py new file mode 100644 index 0000000000000000000000000000000000000000..744049a2422d26e846ce579ca3f8dee80d78b0e6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_f2py2e.py @@ -0,0 +1,896 @@ +import textwrap, re, sys, subprocess, shlex +from pathlib import Path +from collections import namedtuple +import platform + +import pytest + +from . import util +from numpy.f2py.f2py2e import main as f2pycli + +######################### +# CLI utils and classes # +######################### + +PPaths = namedtuple("PPaths", "finp, f90inp, pyf, wrap77, wrap90, cmodf") + + +def get_io_paths(fname_inp, mname="untitled"): + """Takes in a temporary file for testing and returns the expected output and input paths + + Here expected output is essentially one of any of the possible generated + files. + + ..note:: + + Since this does not actually run f2py, none of these are guaranteed to + exist, and module names are typically incorrect + + Parameters + ---------- + fname_inp : str + The input filename + mname : str, optional + The name of the module, untitled by default + + Returns + ------- + genp : NamedTuple PPaths + The possible paths which are generated, not all of which exist + """ + bpath = Path(fname_inp) + return PPaths( + finp=bpath.with_suffix(".f"), + f90inp=bpath.with_suffix(".f90"), + pyf=bpath.with_suffix(".pyf"), + wrap77=bpath.with_name(f"{mname}-f2pywrappers.f"), + wrap90=bpath.with_name(f"{mname}-f2pywrappers2.f90"), + cmodf=bpath.with_name(f"{mname}module.c"), + ) + + +############## +# CLI Fixtures and Tests # +############# + + +@pytest.fixture(scope="session") +def hello_world_f90(tmpdir_factory): + """Generates a single f90 file for testing""" + fdat = util.getpath("tests", "src", "cli", "hiworld.f90").read_text() + fn = tmpdir_factory.getbasetemp() / "hello.f90" + fn.write_text(fdat, encoding="ascii") + return fn + + +@pytest.fixture(scope="session") +def gh23598_warn(tmpdir_factory): + """F90 file for testing warnings in gh23598""" + fdat = util.getpath("tests", "src", "crackfortran", "gh23598Warn.f90").read_text() + fn = tmpdir_factory.getbasetemp() / "gh23598Warn.f90" + fn.write_text(fdat, encoding="ascii") + return fn + + +@pytest.fixture(scope="session") +def gh22819_cli(tmpdir_factory): + """F90 file for testing disallowed CLI arguments in ghff819""" + fdat = util.getpath("tests", "src", "cli", "gh_22819.pyf").read_text() + fn = tmpdir_factory.getbasetemp() / "gh_22819.pyf" + fn.write_text(fdat, encoding="ascii") + return fn + + +@pytest.fixture(scope="session") +def hello_world_f77(tmpdir_factory): + """Generates a single f77 file for testing""" + fdat = util.getpath("tests", "src", "cli", "hi77.f").read_text() + fn = tmpdir_factory.getbasetemp() / "hello.f" + fn.write_text(fdat, encoding="ascii") + return fn + + +@pytest.fixture(scope="session") +def retreal_f77(tmpdir_factory): + """Generates a single f77 file for testing""" + fdat = util.getpath("tests", "src", "return_real", "foo77.f").read_text() + fn = tmpdir_factory.getbasetemp() / "foo.f" + fn.write_text(fdat, encoding="ascii") + return fn + +@pytest.fixture(scope="session") +def f2cmap_f90(tmpdir_factory): + """Generates a single f90 file for testing""" + fdat = util.getpath("tests", "src", "f2cmap", "isoFortranEnvMap.f90").read_text() + f2cmap = util.getpath("tests", "src", "f2cmap", ".f2py_f2cmap").read_text() + fn = tmpdir_factory.getbasetemp() / "f2cmap.f90" + fmap = tmpdir_factory.getbasetemp() / "mapfile" + fn.write_text(fdat, encoding="ascii") + fmap.write_text(f2cmap, encoding="ascii") + return fn + + +def test_gh22819_cli(capfd, gh22819_cli, monkeypatch): + """Check that module names are handled correctly + gh-22819 + Essentially, the -m name cannot be used to import the module, so the module + named in the .pyf needs to be used instead + + CLI :: -m and a .pyf file + """ + ipath = Path(gh22819_cli) + monkeypatch.setattr(sys, "argv", f"f2py -m blah {ipath}".split()) + with util.switchdir(ipath.parent): + f2pycli() + gen_paths = [item.name for item in ipath.parent.rglob("*") if item.is_file()] + assert "blahmodule.c" not in gen_paths # shouldn't be generated + assert "blah-f2pywrappers.f" not in gen_paths + assert "test_22819-f2pywrappers.f" in gen_paths + assert "test_22819module.c" in gen_paths + assert "Ignoring blah" + + +def test_gh22819_many_pyf(capfd, gh22819_cli, monkeypatch): + """Only one .pyf file allowed + gh-22819 + CLI :: .pyf files + """ + ipath = Path(gh22819_cli) + monkeypatch.setattr(sys, "argv", f"f2py -m blah {ipath} hello.pyf".split()) + with util.switchdir(ipath.parent): + with pytest.raises(ValueError, match="Only one .pyf file per call"): + f2pycli() + + +def test_gh23598_warn(capfd, gh23598_warn, monkeypatch): + foutl = get_io_paths(gh23598_warn, mname="test") + ipath = foutl.f90inp + monkeypatch.setattr( + sys, "argv", + f'f2py {ipath} -m test'.split()) + + with util.switchdir(ipath.parent): + f2pycli() # Generate files + wrapper = foutl.wrap90.read_text() + assert "intproductf2pywrap, intpr" not in wrapper + + +def test_gen_pyf(capfd, hello_world_f90, monkeypatch): + """Ensures that a signature file is generated via the CLI + CLI :: -h + """ + ipath = Path(hello_world_f90) + opath = Path(hello_world_f90).stem + ".pyf" + monkeypatch.setattr(sys, "argv", f'f2py -h {opath} {ipath}'.split()) + + with util.switchdir(ipath.parent): + f2pycli() # Generate wrappers + out, _ = capfd.readouterr() + assert "Saving signatures to file" in out + assert Path(f'{opath}').exists() + + +def test_gen_pyf_stdout(capfd, hello_world_f90, monkeypatch): + """Ensures that a signature file can be dumped to stdout + CLI :: -h + """ + ipath = Path(hello_world_f90) + monkeypatch.setattr(sys, "argv", f'f2py -h stdout {ipath}'.split()) + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "Saving signatures to file" in out + assert "function hi() ! in " in out + + +def test_gen_pyf_no_overwrite(capfd, hello_world_f90, monkeypatch): + """Ensures that the CLI refuses to overwrite signature files + CLI :: -h without --overwrite-signature + """ + ipath = Path(hello_world_f90) + monkeypatch.setattr(sys, "argv", f'f2py -h faker.pyf {ipath}'.split()) + + with util.switchdir(ipath.parent): + Path("faker.pyf").write_text("Fake news", encoding="ascii") + with pytest.raises(SystemExit): + f2pycli() # Refuse to overwrite + _, err = capfd.readouterr() + assert "Use --overwrite-signature to overwrite" in err + + +@pytest.mark.skipif((platform.system() != 'Linux') or (sys.version_info <= (3, 12)), + reason='Compiler and 3.12 required') +def test_untitled_cli(capfd, hello_world_f90, monkeypatch): + """Check that modules are named correctly + + CLI :: defaults + """ + ipath = Path(hello_world_f90) + monkeypatch.setattr(sys, "argv", f"f2py --backend meson -c {ipath}".split()) + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "untitledmodule.c" in out + + +@pytest.mark.skipif((platform.system() != 'Linux') or (sys.version_info <= (3, 12)), reason='Compiler and 3.12 required') +def test_no_py312_distutils_fcompiler(capfd, hello_world_f90, monkeypatch): + """Check that no distutils imports are performed on 3.12 + CLI :: --fcompiler --help-link --backend distutils + """ + MNAME = "hi" + foutl = get_io_paths(hello_world_f90, mname=MNAME) + ipath = foutl.f90inp + monkeypatch.setattr( + sys, "argv", f"f2py {ipath} -c --fcompiler=gfortran -m {MNAME}".split() + ) + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "--fcompiler cannot be used with meson" in out + monkeypatch.setattr( + sys, "argv", f"f2py --help-link".split() + ) + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "Use --dep for meson builds" in out + MNAME = "hi2" # Needs to be different for a new -c + monkeypatch.setattr( + sys, "argv", f"f2py {ipath} -c -m {MNAME} --backend distutils".split() + ) + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "Cannot use distutils backend with Python>=3.12" in out + + +@pytest.mark.xfail +def test_f2py_skip(capfd, retreal_f77, monkeypatch): + """Tests that functions can be skipped + CLI :: skip: + """ + foutl = get_io_paths(retreal_f77, mname="test") + ipath = foutl.finp + toskip = "t0 t4 t8 sd s8 s4" + remaining = "td s0" + monkeypatch.setattr( + sys, "argv", + f'f2py {ipath} -m test skip: {toskip}'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, err = capfd.readouterr() + for skey in toskip.split(): + assert ( + f'buildmodule: Could not found the body of interfaced routine "{skey}". Skipping.' + in err) + for rkey in remaining.split(): + assert f'Constructing wrapper function "{rkey}"' in out + + +def test_f2py_only(capfd, retreal_f77, monkeypatch): + """Test that functions can be kept by only: + CLI :: only: + """ + foutl = get_io_paths(retreal_f77, mname="test") + ipath = foutl.finp + toskip = "t0 t4 t8 sd s8 s4" + tokeep = "td s0" + monkeypatch.setattr( + sys, "argv", + f'f2py {ipath} -m test only: {tokeep}'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, err = capfd.readouterr() + for skey in toskip.split(): + assert ( + f'buildmodule: Could not find the body of interfaced routine "{skey}". Skipping.' + in err) + for rkey in tokeep.split(): + assert f'Constructing wrapper function "{rkey}"' in out + + +def test_file_processing_switch(capfd, hello_world_f90, retreal_f77, + monkeypatch): + """Tests that it is possible to return to file processing mode + CLI :: : + BUG: numpy-gh #20520 + """ + foutl = get_io_paths(retreal_f77, mname="test") + ipath = foutl.finp + toskip = "t0 t4 t8 sd s8 s4" + ipath2 = Path(hello_world_f90) + tokeep = "td s0 hi" # hi is in ipath2 + mname = "blah" + monkeypatch.setattr( + sys, + "argv", + f'f2py {ipath} -m {mname} only: {tokeep} : {ipath2}'.split( + ), + ) + + with util.switchdir(ipath.parent): + f2pycli() + out, err = capfd.readouterr() + for skey in toskip.split(): + assert ( + f'buildmodule: Could not find the body of interfaced routine "{skey}". Skipping.' + in err) + for rkey in tokeep.split(): + assert f'Constructing wrapper function "{rkey}"' in out + + +def test_mod_gen_f77(capfd, hello_world_f90, monkeypatch): + """Checks the generation of files based on a module name + CLI :: -m + """ + MNAME = "hi" + foutl = get_io_paths(hello_world_f90, mname=MNAME) + ipath = foutl.f90inp + monkeypatch.setattr(sys, "argv", f'f2py {ipath} -m {MNAME}'.split()) + with util.switchdir(ipath.parent): + f2pycli() + + # Always generate C module + assert Path.exists(foutl.cmodf) + # File contains a function, check for F77 wrappers + assert Path.exists(foutl.wrap77) + + +def test_mod_gen_gh25263(capfd, hello_world_f77, monkeypatch): + """Check that pyf files are correctly generated with module structure + CLI :: -m -h pyf_file + BUG: numpy-gh #20520 + """ + MNAME = "hi" + foutl = get_io_paths(hello_world_f77, mname=MNAME) + ipath = foutl.finp + monkeypatch.setattr(sys, "argv", f'f2py {ipath} -m {MNAME} -h hi.pyf'.split()) + with util.switchdir(ipath.parent): + f2pycli() + with Path('hi.pyf').open() as hipyf: + pyfdat = hipyf.read() + assert "python module hi" in pyfdat + + +def test_lower_cmod(capfd, hello_world_f77, monkeypatch): + """Lowers cases by flag or when -h is present + + CLI :: --[no-]lower + """ + foutl = get_io_paths(hello_world_f77, mname="test") + ipath = foutl.finp + capshi = re.compile(r"HI\(\)") + capslo = re.compile(r"hi\(\)") + # Case I: --lower is passed + monkeypatch.setattr(sys, "argv", f'f2py {ipath} -m test --lower'.split()) + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert capslo.search(out) is not None + assert capshi.search(out) is None + # Case II: --no-lower is passed + monkeypatch.setattr(sys, "argv", + f'f2py {ipath} -m test --no-lower'.split()) + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert capslo.search(out) is None + assert capshi.search(out) is not None + + +def test_lower_sig(capfd, hello_world_f77, monkeypatch): + """Lowers cases in signature files by flag or when -h is present + + CLI :: --[no-]lower -h + """ + foutl = get_io_paths(hello_world_f77, mname="test") + ipath = foutl.finp + # Signature files + capshi = re.compile(r"Block: HI") + capslo = re.compile(r"Block: hi") + # Case I: --lower is implied by -h + # TODO: Clean up to prevent passing --overwrite-signature + monkeypatch.setattr( + sys, + "argv", + f'f2py {ipath} -h {foutl.pyf} -m test --overwrite-signature'.split(), + ) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert capslo.search(out) is not None + assert capshi.search(out) is None + + # Case II: --no-lower overrides -h + monkeypatch.setattr( + sys, + "argv", + f'f2py {ipath} -h {foutl.pyf} -m test --overwrite-signature --no-lower' + .split(), + ) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert capslo.search(out) is None + assert capshi.search(out) is not None + + +def test_build_dir(capfd, hello_world_f90, monkeypatch): + """Ensures that the build directory can be specified + + CLI :: --build-dir + """ + ipath = Path(hello_world_f90) + mname = "blah" + odir = "tttmp" + monkeypatch.setattr(sys, "argv", + f'f2py -m {mname} {ipath} --build-dir {odir}'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert f"Wrote C/API module \"{mname}\"" in out + + +def test_overwrite(capfd, hello_world_f90, monkeypatch): + """Ensures that the build directory can be specified + + CLI :: --overwrite-signature + """ + ipath = Path(hello_world_f90) + monkeypatch.setattr( + sys, "argv", + f'f2py -h faker.pyf {ipath} --overwrite-signature'.split()) + + with util.switchdir(ipath.parent): + Path("faker.pyf").write_text("Fake news", encoding="ascii") + f2pycli() + out, _ = capfd.readouterr() + assert "Saving signatures to file" in out + + +def test_latexdoc(capfd, hello_world_f90, monkeypatch): + """Ensures that TeX documentation is written out + + CLI :: --latex-doc + """ + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr(sys, "argv", + f'f2py -m {mname} {ipath} --latex-doc'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "Documentation is saved to file" in out + with Path(f"{mname}module.tex").open() as otex: + assert "\\documentclass" in otex.read() + + +def test_nolatexdoc(capfd, hello_world_f90, monkeypatch): + """Ensures that TeX documentation is written out + + CLI :: --no-latex-doc + """ + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr(sys, "argv", + f'f2py -m {mname} {ipath} --no-latex-doc'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "Documentation is saved to file" not in out + + +def test_shortlatex(capfd, hello_world_f90, monkeypatch): + """Ensures that truncated documentation is written out + + TODO: Test to ensure this has no effect without --latex-doc + CLI :: --latex-doc --short-latex + """ + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr( + sys, + "argv", + f'f2py -m {mname} {ipath} --latex-doc --short-latex'.split(), + ) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "Documentation is saved to file" in out + with Path(f"./{mname}module.tex").open() as otex: + assert "\\documentclass" not in otex.read() + + +def test_restdoc(capfd, hello_world_f90, monkeypatch): + """Ensures that RsT documentation is written out + + CLI :: --rest-doc + """ + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr(sys, "argv", + f'f2py -m {mname} {ipath} --rest-doc'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "ReST Documentation is saved to file" in out + with Path(f"./{mname}module.rest").open() as orst: + assert r".. -*- rest -*-" in orst.read() + + +def test_norestexdoc(capfd, hello_world_f90, monkeypatch): + """Ensures that TeX documentation is written out + + CLI :: --no-rest-doc + """ + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr(sys, "argv", + f'f2py -m {mname} {ipath} --no-rest-doc'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "ReST Documentation is saved to file" not in out + + +def test_debugcapi(capfd, hello_world_f90, monkeypatch): + """Ensures that debugging wrappers are written + + CLI :: --debug-capi + """ + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr(sys, "argv", + f'f2py -m {mname} {ipath} --debug-capi'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + with Path(f"./{mname}module.c").open() as ocmod: + assert r"#define DEBUGCFUNCS" in ocmod.read() + + +@pytest.mark.skip(reason="Consistently fails on CI; noisy so skip not xfail.") +def test_debugcapi_bld(hello_world_f90, monkeypatch): + """Ensures that debugging wrappers work + + CLI :: --debug-capi -c + """ + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr(sys, "argv", + f'f2py -m {mname} {ipath} -c --debug-capi'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + cmd_run = shlex.split("python3 -c \"import blah; blah.hi()\"") + rout = subprocess.run(cmd_run, capture_output=True, encoding='UTF-8') + eout = ' Hello World\n' + eerr = textwrap.dedent("""\ +debug-capi:Python C/API function blah.hi() +debug-capi:float hi=:output,hidden,scalar +debug-capi:hi=0 +debug-capi:Fortran subroutine `f2pywraphi(&hi)' +debug-capi:hi=0 +debug-capi:Building return value. +debug-capi:Python C/API function blah.hi: successful. +debug-capi:Freeing memory. + """) + assert rout.stdout == eout + assert rout.stderr == eerr + + +def test_wrapfunc_def(capfd, hello_world_f90, monkeypatch): + """Ensures that fortran subroutine wrappers for F77 are included by default + + CLI :: --[no]-wrap-functions + """ + # Implied + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr(sys, "argv", f'f2py -m {mname} {ipath}'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert r"Fortran 77 wrappers are saved to" in out + + # Explicit + monkeypatch.setattr(sys, "argv", + f'f2py -m {mname} {ipath} --wrap-functions'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert r"Fortran 77 wrappers are saved to" in out + + +def test_nowrapfunc(capfd, hello_world_f90, monkeypatch): + """Ensures that fortran subroutine wrappers for F77 can be disabled + + CLI :: --no-wrap-functions + """ + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr(sys, "argv", + f'f2py -m {mname} {ipath} --no-wrap-functions'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert r"Fortran 77 wrappers are saved to" not in out + + +def test_inclheader(capfd, hello_world_f90, monkeypatch): + """Add to the include directories + + CLI :: -include + TODO: Document this in the help string + """ + ipath = Path(hello_world_f90) + mname = "blah" + monkeypatch.setattr( + sys, + "argv", + f'f2py -m {mname} {ipath} -include -include '. + split(), + ) + + with util.switchdir(ipath.parent): + f2pycli() + with Path(f"./{mname}module.c").open() as ocmod: + ocmr = ocmod.read() + assert "#include " in ocmr + assert "#include " in ocmr + + +def test_inclpath(): + """Add to the include directories + + CLI :: --include-paths + """ + # TODO: populate + pass + + +def test_hlink(): + """Add to the include directories + + CLI :: --help-link + """ + # TODO: populate + pass + + +def test_f2cmap(capfd, f2cmap_f90, monkeypatch): + """Check that Fortran-to-Python KIND specs can be passed + + CLI :: --f2cmap + """ + ipath = Path(f2cmap_f90) + monkeypatch.setattr(sys, "argv", f'f2py -m blah {ipath} --f2cmap mapfile'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "Reading f2cmap from 'mapfile' ..." in out + assert "Mapping \"real(kind=real32)\" to \"float\"" in out + assert "Mapping \"real(kind=real64)\" to \"double\"" in out + assert "Mapping \"integer(kind=int64)\" to \"long_long\"" in out + assert "Successfully applied user defined f2cmap changes" in out + + +def test_quiet(capfd, hello_world_f90, monkeypatch): + """Reduce verbosity + + CLI :: --quiet + """ + ipath = Path(hello_world_f90) + monkeypatch.setattr(sys, "argv", f'f2py -m blah {ipath} --quiet'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert len(out) == 0 + + +def test_verbose(capfd, hello_world_f90, monkeypatch): + """Increase verbosity + + CLI :: --verbose + """ + ipath = Path(hello_world_f90) + monkeypatch.setattr(sys, "argv", f'f2py -m blah {ipath} --verbose'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + out, _ = capfd.readouterr() + assert "analyzeline" in out + + +def test_version(capfd, monkeypatch): + """Ensure version + + CLI :: -v + """ + monkeypatch.setattr(sys, "argv", 'f2py -v'.split()) + # TODO: f2py2e should not call sys.exit() after printing the version + with pytest.raises(SystemExit): + f2pycli() + out, _ = capfd.readouterr() + import numpy as np + assert np.__version__ == out.strip() + + +@pytest.mark.skip(reason="Consistently fails on CI; noisy so skip not xfail.") +def test_npdistop(hello_world_f90, monkeypatch): + """ + CLI :: -c + """ + ipath = Path(hello_world_f90) + monkeypatch.setattr(sys, "argv", f'f2py -m blah {ipath} -c'.split()) + + with util.switchdir(ipath.parent): + f2pycli() + cmd_run = shlex.split("python -c \"import blah; blah.hi()\"") + rout = subprocess.run(cmd_run, capture_output=True, encoding='UTF-8') + eout = ' Hello World\n' + assert rout.stdout == eout + + +# Numpy distutils flags +# TODO: These should be tested separately + + +def test_npd_fcompiler(): + """ + CLI :: -c --fcompiler + """ + # TODO: populate + pass + + +def test_npd_compiler(): + """ + CLI :: -c --compiler + """ + # TODO: populate + pass + + +def test_npd_help_fcompiler(): + """ + CLI :: -c --help-fcompiler + """ + # TODO: populate + pass + + +def test_npd_f77exec(): + """ + CLI :: -c --f77exec + """ + # TODO: populate + pass + + +def test_npd_f90exec(): + """ + CLI :: -c --f90exec + """ + # TODO: populate + pass + + +def test_npd_f77flags(): + """ + CLI :: -c --f77flags + """ + # TODO: populate + pass + + +def test_npd_f90flags(): + """ + CLI :: -c --f90flags + """ + # TODO: populate + pass + + +def test_npd_opt(): + """ + CLI :: -c --opt + """ + # TODO: populate + pass + + +def test_npd_arch(): + """ + CLI :: -c --arch + """ + # TODO: populate + pass + + +def test_npd_noopt(): + """ + CLI :: -c --noopt + """ + # TODO: populate + pass + + +def test_npd_noarch(): + """ + CLI :: -c --noarch + """ + # TODO: populate + pass + + +def test_npd_debug(): + """ + CLI :: -c --debug + """ + # TODO: populate + pass + + +def test_npd_link_auto(): + """ + CLI :: -c --link- + """ + # TODO: populate + pass + + +def test_npd_lib(): + """ + CLI :: -c -L/path/to/lib/ -l + """ + # TODO: populate + pass + + +def test_npd_define(): + """ + CLI :: -D + """ + # TODO: populate + pass + + +def test_npd_undefine(): + """ + CLI :: -U + """ + # TODO: populate + pass + + +def test_npd_incl(): + """ + CLI :: -I/path/to/include/ + """ + # TODO: populate + pass + + +def test_npd_linker(): + """ + CLI :: .o .so .a + """ + # TODO: populate + pass diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_isoc.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_isoc.py new file mode 100644 index 0000000000000000000000000000000000000000..97f71e6c854cb1d9f9a9acc508b15df0b8123822 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_isoc.py @@ -0,0 +1,53 @@ +from . import util +import numpy as np +import pytest +from numpy.testing import assert_allclose + +class TestISOC(util.F2PyTest): + sources = [ + util.getpath("tests", "src", "isocintrin", "isoCtests.f90"), + ] + + # gh-24553 + @pytest.mark.slow + def test_c_double(self): + out = self.module.coddity.c_add(1, 2) + exp_out = 3 + assert out == exp_out + + # gh-9693 + def test_bindc_function(self): + out = self.module.coddity.wat(1, 20) + exp_out = 8 + assert out == exp_out + + # gh-25207 + def test_bindc_kinds(self): + out = self.module.coddity.c_add_int64(1, 20) + exp_out = 21 + assert out == exp_out + + # gh-25207 + def test_bindc_add_arr(self): + a = np.array([1,2,3]) + b = np.array([1,2,3]) + out = self.module.coddity.add_arr(a, b) + exp_out = a*2 + assert_allclose(out, exp_out) + + +def test_process_f2cmap_dict(): + from numpy.f2py.auxfuncs import process_f2cmap_dict + + f2cmap_all = {"integer": {"8": "rubbish_type"}} + new_map = {"INTEGER": {"4": "int"}} + c2py_map = {"int": "int", "rubbish_type": "long"} + + exp_map, exp_maptyp = ({"integer": {"8": "rubbish_type", "4": "int"}}, ["int"]) + + # Call the function + res_map, res_maptyp = process_f2cmap_dict(f2cmap_all, new_map, c2py_map) + + # Assert the result is as expected + assert res_map == exp_map + assert res_maptyp == exp_maptyp diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_kind.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_kind.py new file mode 100644 index 0000000000000000000000000000000000000000..c8cc57ff21c9e42834e4db4338bc97eed589d02a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_kind.py @@ -0,0 +1,50 @@ +import sys +import os +import pytest +import platform + +from numpy.f2py.crackfortran import ( + _selected_int_kind_func as selected_int_kind, + _selected_real_kind_func as selected_real_kind, +) +from . import util + + +class TestKind(util.F2PyTest): + sources = [util.getpath("tests", "src", "kind", "foo.f90")] + + @pytest.mark.skipif(sys.maxsize < 2 ** 31 + 1, + reason="Fails for 32 bit machines") + def test_int(self): + """Test `int` kind_func for integers up to 10**40.""" + selectedintkind = self.module.selectedintkind + + for i in range(40): + assert selectedintkind(i) == selected_int_kind( + i + ), f"selectedintkind({i}): expected {selected_int_kind(i)!r} but got {selectedintkind(i)!r}" + + def test_real(self): + """ + Test (processor-dependent) `real` kind_func for real numbers + of up to 31 digits precision (extended/quadruple). + """ + selectedrealkind = self.module.selectedrealkind + + for i in range(32): + assert selectedrealkind(i) == selected_real_kind( + i + ), f"selectedrealkind({i}): expected {selected_real_kind(i)!r} but got {selectedrealkind(i)!r}" + + @pytest.mark.xfail(platform.machine().lower().startswith("ppc"), + reason="Some PowerPC may not support full IEEE 754 precision") + def test_quad_precision(self): + """ + Test kind_func for quadruple precision [`real(16)`] of 32+ digits . + """ + selectedrealkind = self.module.selectedrealkind + + for i in range(32, 40): + assert selectedrealkind(i) == selected_real_kind( + i + ), f"selectedrealkind({i}): expected {selected_real_kind(i)!r} but got {selectedrealkind(i)!r}" diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_mixed.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_mixed.py new file mode 100644 index 0000000000000000000000000000000000000000..49d0ba20c29a5f24d34cbb8da5103580a82be25a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_mixed.py @@ -0,0 +1,34 @@ +import os +import textwrap +import pytest + +from numpy.testing import IS_PYPY +from . import util + + +class TestMixed(util.F2PyTest): + sources = [ + util.getpath("tests", "src", "mixed", "foo.f"), + util.getpath("tests", "src", "mixed", "foo_fixed.f90"), + util.getpath("tests", "src", "mixed", "foo_free.f90"), + ] + + @pytest.mark.slow + def test_all(self): + assert self.module.bar11() == 11 + assert self.module.foo_fixed.bar12() == 12 + assert self.module.foo_free.bar13() == 13 + + @pytest.mark.xfail(IS_PYPY, + reason="PyPy cannot modify tp_doc after PyType_Ready") + def test_docstring(self): + expected = textwrap.dedent("""\ + a = bar11() + + Wrapper for ``bar11``. + + Returns + ------- + a : int + """) + assert self.module.bar11.__doc__ == expected diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_modules.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_modules.py new file mode 100644 index 0000000000000000000000000000000000000000..009ae3365cd59c099849905d9abc8e81cb6d97c3 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_modules.py @@ -0,0 +1,50 @@ +import pytest +import textwrap + +from . import util +from numpy.testing import IS_PYPY + + +@pytest.mark.slow +class TestModuleDocString(util.F2PyTest): + sources = [util.getpath("tests", "src", "modules", "module_data_docstring.f90")] + + @pytest.mark.xfail(IS_PYPY, reason="PyPy cannot modify tp_doc after PyType_Ready") + def test_module_docstring(self): + assert self.module.mod.__doc__ == textwrap.dedent( + """\ + i : 'i'-scalar + x : 'i'-array(4) + a : 'f'-array(2,3) + b : 'f'-array(-1,-1), not allocated\x00 + foo()\n + Wrapper for ``foo``.\n\n""" + ) + + +@pytest.mark.slow +class TestModuleAndSubroutine(util.F2PyTest): + module_name = "example" + sources = [ + util.getpath("tests", "src", "modules", "gh25337", "data.f90"), + util.getpath("tests", "src", "modules", "gh25337", "use_data.f90"), + ] + + def test_gh25337(self): + self.module.data.set_shift(3) + assert "data" in dir(self.module) + + +@pytest.mark.slow +class TestUsedModule(util.F2PyTest): + module_name = "fmath" + sources = [ + util.getpath("tests", "src", "modules", "use_modules.f90"), + ] + + def test_gh25867(self): + compiled_mods = [x for x in dir(self.module) if "__" not in x] + assert "useops" in compiled_mods + assert self.module.useops.sum_and_double(3, 7) == 20 + assert "mathops" in compiled_mods + assert self.module.mathops.add(3, 7) == 10 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_parameter.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_parameter.py new file mode 100644 index 0000000000000000000000000000000000000000..9c83af174440a5359e683b1a67b69528e3576984 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_parameter.py @@ -0,0 +1,131 @@ +import os +import pytest + +import numpy as np + +from . import util + + +class TestParameters(util.F2PyTest): + # Check that intent(in out) translates as intent(inout) + sources = [ + util.getpath("tests", "src", "parameter", "constant_real.f90"), + util.getpath("tests", "src", "parameter", "constant_integer.f90"), + util.getpath("tests", "src", "parameter", "constant_both.f90"), + util.getpath("tests", "src", "parameter", "constant_compound.f90"), + util.getpath("tests", "src", "parameter", "constant_non_compound.f90"), + util.getpath("tests", "src", "parameter", "constant_array.f90"), + ] + + @pytest.mark.slow + def test_constant_real_single(self): + # non-contiguous should raise error + x = np.arange(6, dtype=np.float32)[::2] + pytest.raises(ValueError, self.module.foo_single, x) + + # check values with contiguous array + x = np.arange(3, dtype=np.float32) + self.module.foo_single(x) + assert np.allclose(x, [0 + 1 + 2 * 3, 1, 2]) + + @pytest.mark.slow + def test_constant_real_double(self): + # non-contiguous should raise error + x = np.arange(6, dtype=np.float64)[::2] + pytest.raises(ValueError, self.module.foo_double, x) + + # check values with contiguous array + x = np.arange(3, dtype=np.float64) + self.module.foo_double(x) + assert np.allclose(x, [0 + 1 + 2 * 3, 1, 2]) + + @pytest.mark.slow + def test_constant_compound_int(self): + # non-contiguous should raise error + x = np.arange(6, dtype=np.int32)[::2] + pytest.raises(ValueError, self.module.foo_compound_int, x) + + # check values with contiguous array + x = np.arange(3, dtype=np.int32) + self.module.foo_compound_int(x) + assert np.allclose(x, [0 + 1 + 2 * 6, 1, 2]) + + @pytest.mark.slow + def test_constant_non_compound_int(self): + # check values + x = np.arange(4, dtype=np.int32) + self.module.foo_non_compound_int(x) + assert np.allclose(x, [0 + 1 + 2 + 3 * 4, 1, 2, 3]) + + @pytest.mark.slow + def test_constant_integer_int(self): + # non-contiguous should raise error + x = np.arange(6, dtype=np.int32)[::2] + pytest.raises(ValueError, self.module.foo_int, x) + + # check values with contiguous array + x = np.arange(3, dtype=np.int32) + self.module.foo_int(x) + assert np.allclose(x, [0 + 1 + 2 * 3, 1, 2]) + + @pytest.mark.slow + def test_constant_integer_long(self): + # non-contiguous should raise error + x = np.arange(6, dtype=np.int64)[::2] + pytest.raises(ValueError, self.module.foo_long, x) + + # check values with contiguous array + x = np.arange(3, dtype=np.int64) + self.module.foo_long(x) + assert np.allclose(x, [0 + 1 + 2 * 3, 1, 2]) + + @pytest.mark.slow + def test_constant_both(self): + # non-contiguous should raise error + x = np.arange(6, dtype=np.float64)[::2] + pytest.raises(ValueError, self.module.foo, x) + + # check values with contiguous array + x = np.arange(3, dtype=np.float64) + self.module.foo(x) + assert np.allclose(x, [0 + 1 * 3 * 3 + 2 * 3 * 3, 1 * 3, 2 * 3]) + + @pytest.mark.slow + def test_constant_no(self): + # non-contiguous should raise error + x = np.arange(6, dtype=np.float64)[::2] + pytest.raises(ValueError, self.module.foo_no, x) + + # check values with contiguous array + x = np.arange(3, dtype=np.float64) + self.module.foo_no(x) + assert np.allclose(x, [0 + 1 * 3 * 3 + 2 * 3 * 3, 1 * 3, 2 * 3]) + + @pytest.mark.slow + def test_constant_sum(self): + # non-contiguous should raise error + x = np.arange(6, dtype=np.float64)[::2] + pytest.raises(ValueError, self.module.foo_sum, x) + + # check values with contiguous array + x = np.arange(3, dtype=np.float64) + self.module.foo_sum(x) + assert np.allclose(x, [0 + 1 * 3 * 3 + 2 * 3 * 3, 1 * 3, 2 * 3]) + + def test_constant_array(self): + x = np.arange(3, dtype=np.float64) + y = np.arange(5, dtype=np.float64) + z = self.module.foo_array(x, y) + assert np.allclose(x, [0.0, 1./10, 2./10]) + assert np.allclose(y, [0.0, 1.*10, 2.*10, 3.*10, 4.*10]) + assert np.allclose(z, 19.0) + + def test_constant_array_any_index(self): + x = np.arange(6, dtype=np.float64) + y = self.module.foo_array_any_index(x) + assert np.allclose(y, x.reshape((2, 3), order='F')) + + def test_constant_array_delims(self): + x = self.module.foo_array_delims() + assert x == 9 + diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_pyf_src.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_pyf_src.py new file mode 100644 index 0000000000000000000000000000000000000000..f77ded2f31d4443c1bda42bb1c21f79fa100ce23 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_pyf_src.py @@ -0,0 +1,44 @@ +# This test is ported from numpy.distutils +from numpy.f2py._src_pyf import process_str +from numpy.testing import assert_equal + + +pyf_src = """ +python module foo + <_rd=real,double precision> + interface + subroutine foosub(tol) + <_rd>, intent(in,out) :: tol + end subroutine foosub + end interface +end python module foo +""" + +expected_pyf = """ +python module foo + interface + subroutine sfoosub(tol) + real, intent(in,out) :: tol + end subroutine sfoosub + subroutine dfoosub(tol) + double precision, intent(in,out) :: tol + end subroutine dfoosub + end interface +end python module foo +""" + + +def normalize_whitespace(s): + """ + Remove leading and trailing whitespace, and convert internal + stretches of whitespace to a single space. + """ + return ' '.join(s.split()) + + +def test_from_template(): + """Regression test for gh-10712.""" + pyf = process_str(pyf_src) + normalized_pyf = normalize_whitespace(pyf) + normalized_expected_pyf = normalize_whitespace(expected_pyf) + assert_equal(normalized_pyf, normalized_expected_pyf) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_quoted_character.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_quoted_character.py new file mode 100644 index 0000000000000000000000000000000000000000..85e83a781e7b55b8e14e780de12d694858b4a236 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_quoted_character.py @@ -0,0 +1,17 @@ +"""See https://github.com/numpy/numpy/pull/10676. + +""" +import sys +import pytest + +from . import util + + +class TestQuotedCharacter(util.F2PyTest): + sources = [util.getpath("tests", "src", "quoted_character", "foo.f")] + + @pytest.mark.skipif(sys.platform == "win32", + reason="Fails with MinGW64 Gfortran (Issue #9673)") + @pytest.mark.slow + def test_quoted_character(self): + assert self.module.foo() == (b"'", b'"', b";", b"!", b"(", b")") diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_regression.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_regression.py new file mode 100644 index 0000000000000000000000000000000000000000..e11ed1a0efa37d92d9ced57f191adff0f5e8afed --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_regression.py @@ -0,0 +1,141 @@ +import os +import pytest +import platform + +import numpy as np +import numpy.testing as npt + +from . import util + + +class TestIntentInOut(util.F2PyTest): + # Check that intent(in out) translates as intent(inout) + sources = [util.getpath("tests", "src", "regression", "inout.f90")] + + @pytest.mark.slow + def test_inout(self): + # non-contiguous should raise error + x = np.arange(6, dtype=np.float32)[::2] + pytest.raises(ValueError, self.module.foo, x) + + # check values with contiguous array + x = np.arange(3, dtype=np.float32) + self.module.foo(x) + assert np.allclose(x, [3, 1, 2]) + + +class TestNegativeBounds(util.F2PyTest): + # Check that negative bounds work correctly + sources = [util.getpath("tests", "src", "negative_bounds", "issue_20853.f90")] + + @pytest.mark.slow + def test_negbound(self): + xvec = np.arange(12) + xlow = -6 + xhigh = 4 + # Calculate the upper bound, + # Keeping the 1 index in mind + def ubound(xl, xh): + return xh - xl + 1 + rval = self.module.foo(is_=xlow, ie_=xhigh, + arr=xvec[:ubound(xlow, xhigh)]) + expval = np.arange(11, dtype = np.float32) + assert np.allclose(rval, expval) + + +class TestNumpyVersionAttribute(util.F2PyTest): + # Check that th attribute __f2py_numpy_version__ is present + # in the compiled module and that has the value np.__version__. + sources = [util.getpath("tests", "src", "regression", "inout.f90")] + + @pytest.mark.slow + def test_numpy_version_attribute(self): + + # Check that self.module has an attribute named "__f2py_numpy_version__" + assert hasattr(self.module, "__f2py_numpy_version__") + + # Check that the attribute __f2py_numpy_version__ is a string + assert isinstance(self.module.__f2py_numpy_version__, str) + + # Check that __f2py_numpy_version__ has the value numpy.__version__ + assert np.__version__ == self.module.__f2py_numpy_version__ + + +def test_include_path(): + incdir = np.f2py.get_include() + fnames_in_dir = os.listdir(incdir) + for fname in ("fortranobject.c", "fortranobject.h"): + assert fname in fnames_in_dir + + +class TestIncludeFiles(util.F2PyTest): + sources = [util.getpath("tests", "src", "regression", "incfile.f90")] + options = [f"-I{util.getpath('tests', 'src', 'regression')}", + f"--include-paths {util.getpath('tests', 'src', 'regression')}"] + + @pytest.mark.slow + def test_gh25344(self): + exp = 7.0 + res = self.module.add(3.0, 4.0) + assert exp == res + +class TestF77Comments(util.F2PyTest): + # Check that comments are stripped from F77 continuation lines + sources = [util.getpath("tests", "src", "regression", "f77comments.f")] + + @pytest.mark.slow + def test_gh26148(self): + x1 = np.array(3, dtype=np.int32) + x2 = np.array(5, dtype=np.int32) + res=self.module.testsub(x1, x2) + assert(res[0] == 8) + assert(res[1] == 15) + + @pytest.mark.slow + def test_gh26466(self): + # Check that comments after PARAMETER directions are stripped + expected = np.arange(1, 11, dtype=np.float32)*2 + res=self.module.testsub2() + npt.assert_allclose(expected, res) + +class TestF90Contiuation(util.F2PyTest): + # Check that comments are stripped from F90 continuation lines + sources = [util.getpath("tests", "src", "regression", "f90continuation.f90")] + + @pytest.mark.slow + def test_gh26148b(self): + x1 = np.array(3, dtype=np.int32) + x2 = np.array(5, dtype=np.int32) + res=self.module.testsub(x1, x2) + assert(res[0] == 8) + assert(res[1] == 15) + +@pytest.mark.slow +def test_gh26623(): + # Including libraries with . should not generate an incorrect meson.build + try: + aa = util.build_module( + [util.getpath("tests", "src", "regression", "f90continuation.f90")], + ["-lfoo.bar"], + module_name="Blah", + ) + except RuntimeError as rerr: + assert "lparen got assign" not in str(rerr) + + +@pytest.mark.slow +@pytest.mark.skipif(platform.system() not in ['Linux', 'Darwin'], reason='Unsupported on this platform for now') +def test_gh25784(): + # Compile dubious file using passed flags + try: + aa = util.build_module( + [util.getpath("tests", "src", "regression", "f77fixedform.f95")], + options=[ + # Meson will collect and dedup these to pass to fortran_args: + "--f77flags='-ffixed-form -O2'", + "--f90flags=\"-ffixed-form -Og\"", + ], + module_name="Blah", + ) + except ImportError as rerr: + assert "unknown_subroutine_" in str(rerr) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_character.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_character.py new file mode 100644 index 0000000000000000000000000000000000000000..078d445a6df6eb37c36e1dc73c4b2a13e250825c --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_character.py @@ -0,0 +1,46 @@ +import pytest + +from numpy import array +from . import util +import platform + +IS_S390X = platform.machine() == "s390x" + + +@pytest.mark.slow +class TestReturnCharacter(util.F2PyTest): + def check_function(self, t, tname): + if tname in ["t0", "t1", "s0", "s1"]: + assert t("23") == b"2" + r = t("ab") + assert r == b"a" + r = t(array("ab")) + assert r == b"a" + r = t(array(77, "u1")) + assert r == b"M" + elif tname in ["ts", "ss"]: + assert t(23) == b"23" + assert t("123456789abcdef") == b"123456789a" + elif tname in ["t5", "s5"]: + assert t(23) == b"23" + assert t("ab") == b"ab" + assert t("123456789abcdef") == b"12345" + else: + raise NotImplementedError + + +class TestFReturnCharacter(TestReturnCharacter): + sources = [ + util.getpath("tests", "src", "return_character", "foo77.f"), + util.getpath("tests", "src", "return_character", "foo90.f90"), + ] + + @pytest.mark.xfail(IS_S390X, reason="callback returns ' '") + @pytest.mark.parametrize("name", "t0,t1,t5,s0,s1,s5,ss".split(",")) + def test_all_f77(self, name): + self.check_function(getattr(self.module, name), name) + + @pytest.mark.xfail(IS_S390X, reason="callback returns ' '") + @pytest.mark.parametrize("name", "t0,t1,t5,ts,s0,s1,s5,ss".split(",")) + def test_all_f90(self, name): + self.check_function(getattr(self.module.f90_return_char, name), name) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_complex.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_complex.py new file mode 100644 index 0000000000000000000000000000000000000000..17811f5d98f94ef1d865e49ccd22046051fd68e5 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_complex.py @@ -0,0 +1,66 @@ +import pytest + +from numpy import array +from . import util + + +@pytest.mark.slow +class TestReturnComplex(util.F2PyTest): + def check_function(self, t, tname): + if tname in ["t0", "t8", "s0", "s8"]: + err = 1e-5 + else: + err = 0.0 + assert abs(t(234j) - 234.0j) <= err + assert abs(t(234.6) - 234.6) <= err + assert abs(t(234) - 234.0) <= err + assert abs(t(234.6 + 3j) - (234.6 + 3j)) <= err + # assert abs(t('234')-234.)<=err + # assert abs(t('234.6')-234.6)<=err + assert abs(t(-234) + 234.0) <= err + assert abs(t([234]) - 234.0) <= err + assert abs(t((234, )) - 234.0) <= err + assert abs(t(array(234)) - 234.0) <= err + assert abs(t(array(23 + 4j, "F")) - (23 + 4j)) <= err + assert abs(t(array([234])) - 234.0) <= err + assert abs(t(array([[234]])) - 234.0) <= err + assert abs(t(array([234]).astype("b")) + 22.0) <= err + assert abs(t(array([234], "h")) - 234.0) <= err + assert abs(t(array([234], "i")) - 234.0) <= err + assert abs(t(array([234], "l")) - 234.0) <= err + assert abs(t(array([234], "q")) - 234.0) <= err + assert abs(t(array([234], "f")) - 234.0) <= err + assert abs(t(array([234], "d")) - 234.0) <= err + assert abs(t(array([234 + 3j], "F")) - (234 + 3j)) <= err + assert abs(t(array([234], "D")) - 234.0) <= err + + # pytest.raises(TypeError, t, array([234], 'S1')) + pytest.raises(TypeError, t, "abc") + + pytest.raises(IndexError, t, []) + pytest.raises(IndexError, t, ()) + + pytest.raises(TypeError, t, t) + pytest.raises(TypeError, t, {}) + + try: + r = t(10**400) + assert repr(r) in ["(inf+0j)", "(Infinity+0j)"] + except OverflowError: + pass + + +class TestFReturnComplex(TestReturnComplex): + sources = [ + util.getpath("tests", "src", "return_complex", "foo77.f"), + util.getpath("tests", "src", "return_complex", "foo90.f90"), + ] + + @pytest.mark.parametrize("name", "t0,t8,t16,td,s0,s8,s16,sd".split(",")) + def test_all_f77(self, name): + self.check_function(getattr(self.module, name), name) + + @pytest.mark.parametrize("name", "t0,t8,t16,td,s0,s8,s16,sd".split(",")) + def test_all_f90(self, name): + self.check_function(getattr(self.module.f90_return_complex, name), + name) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_integer.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_integer.py new file mode 100644 index 0000000000000000000000000000000000000000..428afec4a0efa9f70acd158f610fdee104dbe82a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_integer.py @@ -0,0 +1,54 @@ +import pytest + +from numpy import array +from . import util + + +@pytest.mark.slow +class TestReturnInteger(util.F2PyTest): + def check_function(self, t, tname): + assert t(123) == 123 + assert t(123.6) == 123 + assert t("123") == 123 + assert t(-123) == -123 + assert t([123]) == 123 + assert t((123, )) == 123 + assert t(array(123)) == 123 + assert t(array(123, "b")) == 123 + assert t(array(123, "h")) == 123 + assert t(array(123, "i")) == 123 + assert t(array(123, "l")) == 123 + assert t(array(123, "B")) == 123 + assert t(array(123, "f")) == 123 + assert t(array(123, "d")) == 123 + + # pytest.raises(ValueError, t, array([123],'S3')) + pytest.raises(ValueError, t, "abc") + + pytest.raises(IndexError, t, []) + pytest.raises(IndexError, t, ()) + + pytest.raises(Exception, t, t) + pytest.raises(Exception, t, {}) + + if tname in ["t8", "s8"]: + pytest.raises(OverflowError, t, 100000000000000000000000) + pytest.raises(OverflowError, t, 10000000011111111111111.23) + + +class TestFReturnInteger(TestReturnInteger): + sources = [ + util.getpath("tests", "src", "return_integer", "foo77.f"), + util.getpath("tests", "src", "return_integer", "foo90.f90"), + ] + + @pytest.mark.parametrize("name", + "t0,t1,t2,t4,t8,s0,s1,s2,s4,s8".split(",")) + def test_all_f77(self, name): + self.check_function(getattr(self.module, name), name) + + @pytest.mark.parametrize("name", + "t0,t1,t2,t4,t8,s0,s1,s2,s4,s8".split(",")) + def test_all_f90(self, name): + self.check_function(getattr(self.module.f90_return_integer, name), + name) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_logical.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_logical.py new file mode 100644 index 0000000000000000000000000000000000000000..92fb902af4ddd269d67c427bc5090aabc35513dd --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_logical.py @@ -0,0 +1,64 @@ +import pytest + +from numpy import array +from . import util + + +class TestReturnLogical(util.F2PyTest): + def check_function(self, t): + assert t(True) == 1 + assert t(False) == 0 + assert t(0) == 0 + assert t(None) == 0 + assert t(0.0) == 0 + assert t(0j) == 0 + assert t(1j) == 1 + assert t(234) == 1 + assert t(234.6) == 1 + assert t(234.6 + 3j) == 1 + assert t("234") == 1 + assert t("aaa") == 1 + assert t("") == 0 + assert t([]) == 0 + assert t(()) == 0 + assert t({}) == 0 + assert t(t) == 1 + assert t(-234) == 1 + assert t(10**100) == 1 + assert t([234]) == 1 + assert t((234, )) == 1 + assert t(array(234)) == 1 + assert t(array([234])) == 1 + assert t(array([[234]])) == 1 + assert t(array([127], "b")) == 1 + assert t(array([234], "h")) == 1 + assert t(array([234], "i")) == 1 + assert t(array([234], "l")) == 1 + assert t(array([234], "f")) == 1 + assert t(array([234], "d")) == 1 + assert t(array([234 + 3j], "F")) == 1 + assert t(array([234], "D")) == 1 + assert t(array(0)) == 0 + assert t(array([0])) == 0 + assert t(array([[0]])) == 0 + assert t(array([0j])) == 0 + assert t(array([1])) == 1 + pytest.raises(ValueError, t, array([0, 0])) + + +class TestFReturnLogical(TestReturnLogical): + sources = [ + util.getpath("tests", "src", "return_logical", "foo77.f"), + util.getpath("tests", "src", "return_logical", "foo90.f90"), + ] + + @pytest.mark.slow + @pytest.mark.parametrize("name", "t0,t1,t2,t4,s0,s1,s2,s4".split(",")) + def test_all_f77(self, name): + self.check_function(getattr(self.module, name)) + + @pytest.mark.slow + @pytest.mark.parametrize("name", + "t0,t1,t2,t4,t8,s0,s1,s2,s4,s8".split(",")) + def test_all_f90(self, name): + self.check_function(getattr(self.module.f90_return_logical, name)) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_real.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_real.py new file mode 100644 index 0000000000000000000000000000000000000000..d9b316dcc45d92b84e18437eeefd2abb6858d840 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_return_real.py @@ -0,0 +1,108 @@ +import platform +import pytest +import numpy as np + +from numpy import array +from . import util + + +@pytest.mark.slow +class TestReturnReal(util.F2PyTest): + def check_function(self, t, tname): + if tname in ["t0", "t4", "s0", "s4"]: + err = 1e-5 + else: + err = 0.0 + assert abs(t(234) - 234.0) <= err + assert abs(t(234.6) - 234.6) <= err + assert abs(t("234") - 234) <= err + assert abs(t("234.6") - 234.6) <= err + assert abs(t(-234) + 234) <= err + assert abs(t([234]) - 234) <= err + assert abs(t((234, )) - 234.0) <= err + assert abs(t(array(234)) - 234.0) <= err + assert abs(t(array(234).astype("b")) + 22) <= err + assert abs(t(array(234, "h")) - 234.0) <= err + assert abs(t(array(234, "i")) - 234.0) <= err + assert abs(t(array(234, "l")) - 234.0) <= err + assert abs(t(array(234, "B")) - 234.0) <= err + assert abs(t(array(234, "f")) - 234.0) <= err + assert abs(t(array(234, "d")) - 234.0) <= err + if tname in ["t0", "t4", "s0", "s4"]: + assert t(1e200) == t(1e300) # inf + + # pytest.raises(ValueError, t, array([234], 'S1')) + pytest.raises(ValueError, t, "abc") + + pytest.raises(IndexError, t, []) + pytest.raises(IndexError, t, ()) + + pytest.raises(Exception, t, t) + pytest.raises(Exception, t, {}) + + try: + r = t(10**400) + assert repr(r) in ["inf", "Infinity"] + except OverflowError: + pass + + +@pytest.mark.skipif( + platform.system() == "Darwin", + reason="Prone to error when run with numpy/f2py/tests on mac os, " + "but not when run in isolation", +) +@pytest.mark.skipif( + np.dtype(np.intp).itemsize < 8, + reason="32-bit builds are buggy" +) +class TestCReturnReal(TestReturnReal): + suffix = ".pyf" + module_name = "c_ext_return_real" + code = """ +python module c_ext_return_real +usercode \'\'\' +float t4(float value) { return value; } +void s4(float *t4, float value) { *t4 = value; } +double t8(double value) { return value; } +void s8(double *t8, double value) { *t8 = value; } +\'\'\' +interface + function t4(value) + real*4 intent(c) :: t4,value + end + function t8(value) + real*8 intent(c) :: t8,value + end + subroutine s4(t4,value) + intent(c) s4 + real*4 intent(out) :: t4 + real*4 intent(c) :: value + end + subroutine s8(t8,value) + intent(c) s8 + real*8 intent(out) :: t8 + real*8 intent(c) :: value + end +end interface +end python module c_ext_return_real + """ + + @pytest.mark.parametrize("name", "t4,t8,s4,s8".split(",")) + def test_all(self, name): + self.check_function(getattr(self.module, name), name) + + +class TestFReturnReal(TestReturnReal): + sources = [ + util.getpath("tests", "src", "return_real", "foo77.f"), + util.getpath("tests", "src", "return_real", "foo90.f90"), + ] + + @pytest.mark.parametrize("name", "t0,t4,t8,td,s0,s4,s8,sd".split(",")) + def test_all_f77(self, name): + self.check_function(getattr(self.module, name), name) + + @pytest.mark.parametrize("name", "t0,t4,t8,td,s0,s4,s8,sd".split(",")) + def test_all_f90(self, name): + self.check_function(getattr(self.module.f90_return_real, name), name) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_semicolon_split.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_semicolon_split.py new file mode 100644 index 0000000000000000000000000000000000000000..ab9c093dbb8256079435046194e743af85707570 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_semicolon_split.py @@ -0,0 +1,75 @@ +import platform +import pytest +import numpy as np + +from . import util + + +@pytest.mark.skipif( + platform.system() == "Darwin", + reason="Prone to error when run with numpy/f2py/tests on mac os, " + "but not when run in isolation", +) +@pytest.mark.skipif( + np.dtype(np.intp).itemsize < 8, + reason="32-bit builds are buggy" +) +class TestMultiline(util.F2PyTest): + suffix = ".pyf" + module_name = "multiline" + code = f""" +python module {module_name} + usercode ''' +void foo(int* x) {{ + char dummy = ';'; + *x = 42; +}} +''' + interface + subroutine foo(x) + intent(c) foo + integer intent(out) :: x + end subroutine foo + end interface +end python module {module_name} + """ + + def test_multiline(self): + assert self.module.foo() == 42 + + +@pytest.mark.skipif( + platform.system() == "Darwin", + reason="Prone to error when run with numpy/f2py/tests on mac os, " + "but not when run in isolation", +) +@pytest.mark.skipif( + np.dtype(np.intp).itemsize < 8, + reason="32-bit builds are buggy" +) +@pytest.mark.slow +class TestCallstatement(util.F2PyTest): + suffix = ".pyf" + module_name = "callstatement" + code = f""" +python module {module_name} + usercode ''' +void foo(int* x) {{ +}} +''' + interface + subroutine foo(x) + intent(c) foo + integer intent(out) :: x + callprotoargument int* + callstatement {{ & + ; & + x = 42; & + }} + end subroutine foo + end interface +end python module {module_name} + """ + + def test_callstatement(self): + assert self.module.foo() == 42 diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_size.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_size.py new file mode 100644 index 0000000000000000000000000000000000000000..bd2c349df585bd316a9e2547a4a3e50b16364d09 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_size.py @@ -0,0 +1,45 @@ +import os +import pytest +import numpy as np + +from . import util + + +class TestSizeSumExample(util.F2PyTest): + sources = [util.getpath("tests", "src", "size", "foo.f90")] + + @pytest.mark.slow + def test_all(self): + r = self.module.foo([[]]) + assert r == [0] + + r = self.module.foo([[1, 2]]) + assert r == [3] + + r = self.module.foo([[1, 2], [3, 4]]) + assert np.allclose(r, [3, 7]) + + r = self.module.foo([[1, 2], [3, 4], [5, 6]]) + assert np.allclose(r, [3, 7, 11]) + + @pytest.mark.slow + def test_transpose(self): + r = self.module.trans([[]]) + assert np.allclose(r.T, np.array([[]])) + + r = self.module.trans([[1, 2]]) + assert np.allclose(r, [[1.], [2.]]) + + r = self.module.trans([[1, 2, 3], [4, 5, 6]]) + assert np.allclose(r, [[1, 4], [2, 5], [3, 6]]) + + @pytest.mark.slow + def test_flatten(self): + r = self.module.flatten([[]]) + assert np.allclose(r, []) + + r = self.module.flatten([[1, 2]]) + assert np.allclose(r, [1, 2]) + + r = self.module.flatten([[1, 2, 3], [4, 5, 6]]) + assert np.allclose(r, [1, 2, 3, 4, 5, 6]) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_string.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_string.py new file mode 100644 index 0000000000000000000000000000000000000000..9e937188c9309eb09534b5b1ec822b5890a0bbdd --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_string.py @@ -0,0 +1,100 @@ +import os +import pytest +import textwrap +import numpy as np +from . import util + + +class TestString(util.F2PyTest): + sources = [util.getpath("tests", "src", "string", "char.f90")] + + @pytest.mark.slow + def test_char(self): + strings = np.array(["ab", "cd", "ef"], dtype="c").T + inp, out = self.module.char_test.change_strings( + strings, strings.shape[1]) + assert inp == pytest.approx(strings) + expected = strings.copy() + expected[1, :] = "AAA" + assert out == pytest.approx(expected) + + +class TestDocStringArguments(util.F2PyTest): + sources = [util.getpath("tests", "src", "string", "string.f")] + + def test_example(self): + a = np.array(b"123\0\0") + b = np.array(b"123\0\0") + c = np.array(b"123") + d = np.array(b"123") + + self.module.foo(a, b, c, d) + + assert a.tobytes() == b"123\0\0" + assert b.tobytes() == b"B23\0\0" + assert c.tobytes() == b"123" + assert d.tobytes() == b"D23" + + +class TestFixedString(util.F2PyTest): + sources = [util.getpath("tests", "src", "string", "fixed_string.f90")] + + @staticmethod + def _sint(s, start=0, end=None): + """Return the content of a string buffer as integer value. + + For example: + _sint('1234') -> 4321 + _sint('123A') -> 17321 + """ + if isinstance(s, np.ndarray): + s = s.tobytes() + elif isinstance(s, str): + s = s.encode() + assert isinstance(s, bytes) + if end is None: + end = len(s) + i = 0 + for j in range(start, min(end, len(s))): + i += s[j] * 10**j + return i + + def _get_input(self, intent="in"): + if intent in ["in"]: + yield "" + yield "1" + yield "1234" + yield "12345" + yield b"" + yield b"\0" + yield b"1" + yield b"\01" + yield b"1\0" + yield b"1234" + yield b"12345" + yield np.ndarray((), np.bytes_, buffer=b"") # array(b'', dtype='|S0') + yield np.array(b"") # array(b'', dtype='|S1') + yield np.array(b"\0") + yield np.array(b"1") + yield np.array(b"1\0") + yield np.array(b"\01") + yield np.array(b"1234") + yield np.array(b"123\0") + yield np.array(b"12345") + + def test_intent_in(self): + for s in self._get_input(): + r = self.module.test_in_bytes4(s) + # also checks that s is not changed inplace + expected = self._sint(s, end=4) + assert r == expected, s + + def test_intent_inout(self): + for s in self._get_input(intent="inout"): + rest = self._sint(s, start=4) + r = self.module.test_inout_bytes4(s) + expected = self._sint(s, end=4) + assert r == expected + + # check that the rest of input string is preserved + assert rest == self._sint(s, start=4) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_symbolic.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_symbolic.py new file mode 100644 index 0000000000000000000000000000000000000000..8452783111ebe7130d17301d228eb5708e9eced7 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_symbolic.py @@ -0,0 +1,494 @@ +import pytest + +from numpy.f2py.symbolic import ( + Expr, + Op, + ArithOp, + Language, + as_symbol, + as_number, + as_string, + as_array, + as_complex, + as_terms, + as_factors, + eliminate_quotes, + insert_quotes, + fromstring, + as_expr, + as_apply, + as_numer_denom, + as_ternary, + as_ref, + as_deref, + normalize, + as_eq, + as_ne, + as_lt, + as_gt, + as_le, + as_ge, +) +from . import util + + +class TestSymbolic(util.F2PyTest): + def test_eliminate_quotes(self): + def worker(s): + r, d = eliminate_quotes(s) + s1 = insert_quotes(r, d) + assert s1 == s + + for kind in ["", "mykind_"]: + worker(kind + '"1234" // "ABCD"') + worker(kind + '"1234" // ' + kind + '"ABCD"') + worker(kind + "\"1234\" // 'ABCD'") + worker(kind + '"1234" // ' + kind + "'ABCD'") + worker(kind + '"1\\"2\'AB\'34"') + worker("a = " + kind + "'1\\'2\"AB\"34'") + + def test_sanity(self): + x = as_symbol("x") + y = as_symbol("y") + z = as_symbol("z") + + assert x.op == Op.SYMBOL + assert repr(x) == "Expr(Op.SYMBOL, 'x')" + assert x == x + assert x != y + assert hash(x) is not None + + n = as_number(123) + m = as_number(456) + assert n.op == Op.INTEGER + assert repr(n) == "Expr(Op.INTEGER, (123, 4))" + assert n == n + assert n != m + assert hash(n) is not None + + fn = as_number(12.3) + fm = as_number(45.6) + assert fn.op == Op.REAL + assert repr(fn) == "Expr(Op.REAL, (12.3, 4))" + assert fn == fn + assert fn != fm + assert hash(fn) is not None + + c = as_complex(1, 2) + c2 = as_complex(3, 4) + assert c.op == Op.COMPLEX + assert repr(c) == ("Expr(Op.COMPLEX, (Expr(Op.INTEGER, (1, 4))," + " Expr(Op.INTEGER, (2, 4))))") + assert c == c + assert c != c2 + assert hash(c) is not None + + s = as_string("'123'") + s2 = as_string('"ABC"') + assert s.op == Op.STRING + assert repr(s) == "Expr(Op.STRING, (\"'123'\", 1))", repr(s) + assert s == s + assert s != s2 + + a = as_array((n, m)) + b = as_array((n, )) + assert a.op == Op.ARRAY + assert repr(a) == ("Expr(Op.ARRAY, (Expr(Op.INTEGER, (123, 4))," + " Expr(Op.INTEGER, (456, 4))))") + assert a == a + assert a != b + + t = as_terms(x) + u = as_terms(y) + assert t.op == Op.TERMS + assert repr(t) == "Expr(Op.TERMS, {Expr(Op.SYMBOL, 'x'): 1})" + assert t == t + assert t != u + assert hash(t) is not None + + v = as_factors(x) + w = as_factors(y) + assert v.op == Op.FACTORS + assert repr(v) == "Expr(Op.FACTORS, {Expr(Op.SYMBOL, 'x'): 1})" + assert v == v + assert w != v + assert hash(v) is not None + + t = as_ternary(x, y, z) + u = as_ternary(x, z, y) + assert t.op == Op.TERNARY + assert t == t + assert t != u + assert hash(t) is not None + + e = as_eq(x, y) + f = as_lt(x, y) + assert e.op == Op.RELATIONAL + assert e == e + assert e != f + assert hash(e) is not None + + def test_tostring_fortran(self): + x = as_symbol("x") + y = as_symbol("y") + z = as_symbol("z") + n = as_number(123) + m = as_number(456) + a = as_array((n, m)) + c = as_complex(n, m) + + assert str(x) == "x" + assert str(n) == "123" + assert str(a) == "[123, 456]" + assert str(c) == "(123, 456)" + + assert str(Expr(Op.TERMS, {x: 1})) == "x" + assert str(Expr(Op.TERMS, {x: 2})) == "2 * x" + assert str(Expr(Op.TERMS, {x: -1})) == "-x" + assert str(Expr(Op.TERMS, {x: -2})) == "-2 * x" + assert str(Expr(Op.TERMS, {x: 1, y: 1})) == "x + y" + assert str(Expr(Op.TERMS, {x: -1, y: -1})) == "-x - y" + assert str(Expr(Op.TERMS, {x: 2, y: 3})) == "2 * x + 3 * y" + assert str(Expr(Op.TERMS, {x: -2, y: 3})) == "-2 * x + 3 * y" + assert str(Expr(Op.TERMS, {x: 2, y: -3})) == "2 * x - 3 * y" + + assert str(Expr(Op.FACTORS, {x: 1})) == "x" + assert str(Expr(Op.FACTORS, {x: 2})) == "x ** 2" + assert str(Expr(Op.FACTORS, {x: -1})) == "x ** -1" + assert str(Expr(Op.FACTORS, {x: -2})) == "x ** -2" + assert str(Expr(Op.FACTORS, {x: 1, y: 1})) == "x * y" + assert str(Expr(Op.FACTORS, {x: 2, y: 3})) == "x ** 2 * y ** 3" + + v = Expr(Op.FACTORS, {x: 2, Expr(Op.TERMS, {x: 1, y: 1}): 3}) + assert str(v) == "x ** 2 * (x + y) ** 3", str(v) + v = Expr(Op.FACTORS, {x: 2, Expr(Op.FACTORS, {x: 1, y: 1}): 3}) + assert str(v) == "x ** 2 * (x * y) ** 3", str(v) + + assert str(Expr(Op.APPLY, ("f", (), {}))) == "f()" + assert str(Expr(Op.APPLY, ("f", (x, ), {}))) == "f(x)" + assert str(Expr(Op.APPLY, ("f", (x, y), {}))) == "f(x, y)" + assert str(Expr(Op.INDEXING, ("f", x))) == "f[x]" + + assert str(as_ternary(x, y, z)) == "merge(y, z, x)" + assert str(as_eq(x, y)) == "x .eq. y" + assert str(as_ne(x, y)) == "x .ne. y" + assert str(as_lt(x, y)) == "x .lt. y" + assert str(as_le(x, y)) == "x .le. y" + assert str(as_gt(x, y)) == "x .gt. y" + assert str(as_ge(x, y)) == "x .ge. y" + + def test_tostring_c(self): + language = Language.C + x = as_symbol("x") + y = as_symbol("y") + z = as_symbol("z") + n = as_number(123) + + assert Expr(Op.FACTORS, {x: 2}).tostring(language=language) == "x * x" + assert (Expr(Op.FACTORS, { + x + y: 2 + }).tostring(language=language) == "(x + y) * (x + y)") + assert Expr(Op.FACTORS, { + x: 12 + }).tostring(language=language) == "pow(x, 12)" + + assert as_apply(ArithOp.DIV, x, + y).tostring(language=language) == "x / y" + assert (as_apply(ArithOp.DIV, x, + x + y).tostring(language=language) == "x / (x + y)") + assert (as_apply(ArithOp.DIV, x - y, x + + y).tostring(language=language) == "(x - y) / (x + y)") + assert (x + (x - y) / (x + y) + + n).tostring(language=language) == "123 + x + (x - y) / (x + y)" + + assert as_ternary(x, y, z).tostring(language=language) == "(x?y:z)" + assert as_eq(x, y).tostring(language=language) == "x == y" + assert as_ne(x, y).tostring(language=language) == "x != y" + assert as_lt(x, y).tostring(language=language) == "x < y" + assert as_le(x, y).tostring(language=language) == "x <= y" + assert as_gt(x, y).tostring(language=language) == "x > y" + assert as_ge(x, y).tostring(language=language) == "x >= y" + + def test_operations(self): + x = as_symbol("x") + y = as_symbol("y") + z = as_symbol("z") + + assert x + x == Expr(Op.TERMS, {x: 2}) + assert x - x == Expr(Op.INTEGER, (0, 4)) + assert x + y == Expr(Op.TERMS, {x: 1, y: 1}) + assert x - y == Expr(Op.TERMS, {x: 1, y: -1}) + assert x * x == Expr(Op.FACTORS, {x: 2}) + assert x * y == Expr(Op.FACTORS, {x: 1, y: 1}) + + assert +x == x + assert -x == Expr(Op.TERMS, {x: -1}), repr(-x) + assert 2 * x == Expr(Op.TERMS, {x: 2}) + assert 2 + x == Expr(Op.TERMS, {x: 1, as_number(1): 2}) + assert 2 * x + 3 * y == Expr(Op.TERMS, {x: 2, y: 3}) + assert (x + y) * 2 == Expr(Op.TERMS, {x: 2, y: 2}) + + assert x**2 == Expr(Op.FACTORS, {x: 2}) + assert (x + y)**2 == Expr( + Op.TERMS, + { + Expr(Op.FACTORS, {x: 2}): 1, + Expr(Op.FACTORS, {y: 2}): 1, + Expr(Op.FACTORS, { + x: 1, + y: 1 + }): 2, + }, + ) + assert (x + y) * x == x**2 + x * y + assert (x + y)**2 == x**2 + 2 * x * y + y**2 + assert (x + y)**2 + (x - y)**2 == 2 * x**2 + 2 * y**2 + assert (x + y) * z == x * z + y * z + assert z * (x + y) == x * z + y * z + + assert (x / 2) == as_apply(ArithOp.DIV, x, as_number(2)) + assert (2 * x / 2) == x + assert (3 * x / 2) == as_apply(ArithOp.DIV, 3 * x, as_number(2)) + assert (4 * x / 2) == 2 * x + assert (5 * x / 2) == as_apply(ArithOp.DIV, 5 * x, as_number(2)) + assert (6 * x / 2) == 3 * x + assert ((3 * 5) * x / 6) == as_apply(ArithOp.DIV, 5 * x, as_number(2)) + assert (30 * x**2 * y**4 / (24 * x**3 * y**3)) == as_apply( + ArithOp.DIV, 5 * y, 4 * x) + assert ((15 * x / 6) / 5) == as_apply(ArithOp.DIV, x, + as_number(2)), (15 * x / 6) / 5 + assert (x / (5 / x)) == as_apply(ArithOp.DIV, x**2, as_number(5)) + + assert (x / 2.0) == Expr(Op.TERMS, {x: 0.5}) + + s = as_string('"ABC"') + t = as_string('"123"') + + assert s // t == Expr(Op.STRING, ('"ABC123"', 1)) + assert s // x == Expr(Op.CONCAT, (s, x)) + assert x // s == Expr(Op.CONCAT, (x, s)) + + c = as_complex(1.0, 2.0) + assert -c == as_complex(-1.0, -2.0) + assert c + c == as_expr((1 + 2j) * 2) + assert c * c == as_expr((1 + 2j)**2) + + def test_substitute(self): + x = as_symbol("x") + y = as_symbol("y") + z = as_symbol("z") + a = as_array((x, y)) + + assert x.substitute({x: y}) == y + assert (x + y).substitute({x: z}) == y + z + assert (x * y).substitute({x: z}) == y * z + assert (x**4).substitute({x: z}) == z**4 + assert (x / y).substitute({x: z}) == z / y + assert x.substitute({x: y + z}) == y + z + assert a.substitute({x: y + z}) == as_array((y + z, y)) + + assert as_ternary(x, y, + z).substitute({x: y + z}) == as_ternary(y + z, y, z) + assert as_eq(x, y).substitute({x: y + z}) == as_eq(y + z, y) + + def test_fromstring(self): + + x = as_symbol("x") + y = as_symbol("y") + z = as_symbol("z") + f = as_symbol("f") + s = as_string('"ABC"') + t = as_string('"123"') + a = as_array((x, y)) + + assert fromstring("x") == x + assert fromstring("+ x") == x + assert fromstring("- x") == -x + assert fromstring("x + y") == x + y + assert fromstring("x + 1") == x + 1 + assert fromstring("x * y") == x * y + assert fromstring("x * 2") == x * 2 + assert fromstring("x / y") == x / y + assert fromstring("x ** 2", language=Language.Python) == x**2 + assert fromstring("x ** 2 ** 3", language=Language.Python) == x**2**3 + assert fromstring("(x + y) * z") == (x + y) * z + + assert fromstring("f(x)") == f(x) + assert fromstring("f(x,y)") == f(x, y) + assert fromstring("f[x]") == f[x] + assert fromstring("f[x][y]") == f[x][y] + + assert fromstring('"ABC"') == s + assert (normalize( + fromstring('"ABC" // "123" ', + language=Language.Fortran)) == s // t) + assert fromstring('f("ABC")') == f(s) + assert fromstring('MYSTRKIND_"ABC"') == as_string('"ABC"', "MYSTRKIND") + + assert fromstring("(/x, y/)") == a, fromstring("(/x, y/)") + assert fromstring("f((/x, y/))") == f(a) + assert fromstring("(/(x+y)*z/)") == as_array(((x + y) * z, )) + + assert fromstring("123") == as_number(123) + assert fromstring("123_2") == as_number(123, 2) + assert fromstring("123_myintkind") == as_number(123, "myintkind") + + assert fromstring("123.0") == as_number(123.0, 4) + assert fromstring("123.0_4") == as_number(123.0, 4) + assert fromstring("123.0_8") == as_number(123.0, 8) + assert fromstring("123.0e0") == as_number(123.0, 4) + assert fromstring("123.0d0") == as_number(123.0, 8) + assert fromstring("123d0") == as_number(123.0, 8) + assert fromstring("123e-0") == as_number(123.0, 4) + assert fromstring("123d+0") == as_number(123.0, 8) + assert fromstring("123.0_myrealkind") == as_number(123.0, "myrealkind") + assert fromstring("3E4") == as_number(30000.0, 4) + + assert fromstring("(1, 2)") == as_complex(1, 2) + assert fromstring("(1e2, PI)") == as_complex(as_number(100.0), + as_symbol("PI")) + + assert fromstring("[1, 2]") == as_array((as_number(1), as_number(2))) + + assert fromstring("POINT(x, y=1)") == as_apply(as_symbol("POINT"), + x, + y=as_number(1)) + assert fromstring( + 'PERSON(name="John", age=50, shape=(/34, 23/))') == as_apply( + as_symbol("PERSON"), + name=as_string('"John"'), + age=as_number(50), + shape=as_array((as_number(34), as_number(23))), + ) + + assert fromstring("x?y:z") == as_ternary(x, y, z) + + assert fromstring("*x") == as_deref(x) + assert fromstring("**x") == as_deref(as_deref(x)) + assert fromstring("&x") == as_ref(x) + assert fromstring("(*x) * (*y)") == as_deref(x) * as_deref(y) + assert fromstring("(*x) * *y") == as_deref(x) * as_deref(y) + assert fromstring("*x * *y") == as_deref(x) * as_deref(y) + assert fromstring("*x**y") == as_deref(x) * as_deref(y) + + assert fromstring("x == y") == as_eq(x, y) + assert fromstring("x != y") == as_ne(x, y) + assert fromstring("x < y") == as_lt(x, y) + assert fromstring("x > y") == as_gt(x, y) + assert fromstring("x <= y") == as_le(x, y) + assert fromstring("x >= y") == as_ge(x, y) + + assert fromstring("x .eq. y", language=Language.Fortran) == as_eq(x, y) + assert fromstring("x .ne. y", language=Language.Fortran) == as_ne(x, y) + assert fromstring("x .lt. y", language=Language.Fortran) == as_lt(x, y) + assert fromstring("x .gt. y", language=Language.Fortran) == as_gt(x, y) + assert fromstring("x .le. y", language=Language.Fortran) == as_le(x, y) + assert fromstring("x .ge. y", language=Language.Fortran) == as_ge(x, y) + + def test_traverse(self): + x = as_symbol("x") + y = as_symbol("y") + z = as_symbol("z") + f = as_symbol("f") + + # Use traverse to substitute a symbol + def replace_visit(s, r=z): + if s == x: + return r + + assert x.traverse(replace_visit) == z + assert y.traverse(replace_visit) == y + assert z.traverse(replace_visit) == z + assert (f(y)).traverse(replace_visit) == f(y) + assert (f(x)).traverse(replace_visit) == f(z) + assert (f[y]).traverse(replace_visit) == f[y] + assert (f[z]).traverse(replace_visit) == f[z] + assert (x + y + z).traverse(replace_visit) == (2 * z + y) + assert (x + + f(y, x - z)).traverse(replace_visit) == (z + + f(y, as_number(0))) + assert as_eq(x, y).traverse(replace_visit) == as_eq(z, y) + + # Use traverse to collect symbols, method 1 + function_symbols = set() + symbols = set() + + def collect_symbols(s): + if s.op is Op.APPLY: + oper = s.data[0] + function_symbols.add(oper) + if oper in symbols: + symbols.remove(oper) + elif s.op is Op.SYMBOL and s not in function_symbols: + symbols.add(s) + + (x + f(y, x - z)).traverse(collect_symbols) + assert function_symbols == {f} + assert symbols == {x, y, z} + + # Use traverse to collect symbols, method 2 + def collect_symbols2(expr, symbols): + if expr.op is Op.SYMBOL: + symbols.add(expr) + + symbols = set() + (x + f(y, x - z)).traverse(collect_symbols2, symbols) + assert symbols == {x, y, z, f} + + # Use traverse to partially collect symbols + def collect_symbols3(expr, symbols): + if expr.op is Op.APPLY: + # skip traversing function calls + return expr + if expr.op is Op.SYMBOL: + symbols.add(expr) + + symbols = set() + (x + f(y, x - z)).traverse(collect_symbols3, symbols) + assert symbols == {x} + + def test_linear_solve(self): + x = as_symbol("x") + y = as_symbol("y") + z = as_symbol("z") + + assert x.linear_solve(x) == (as_number(1), as_number(0)) + assert (x + 1).linear_solve(x) == (as_number(1), as_number(1)) + assert (2 * x).linear_solve(x) == (as_number(2), as_number(0)) + assert (2 * x + 3).linear_solve(x) == (as_number(2), as_number(3)) + assert as_number(3).linear_solve(x) == (as_number(0), as_number(3)) + assert y.linear_solve(x) == (as_number(0), y) + assert (y * z).linear_solve(x) == (as_number(0), y * z) + + assert (x + y).linear_solve(x) == (as_number(1), y) + assert (z * x + y).linear_solve(x) == (z, y) + assert ((z + y) * x + y).linear_solve(x) == (z + y, y) + assert (z * y * x + y).linear_solve(x) == (z * y, y) + + pytest.raises(RuntimeError, lambda: (x * x).linear_solve(x)) + + def test_as_numer_denom(self): + x = as_symbol("x") + y = as_symbol("y") + n = as_number(123) + + assert as_numer_denom(x) == (x, as_number(1)) + assert as_numer_denom(x / n) == (x, n) + assert as_numer_denom(n / x) == (n, x) + assert as_numer_denom(x / y) == (x, y) + assert as_numer_denom(x * y) == (x * y, as_number(1)) + assert as_numer_denom(n + x / y) == (x + n * y, y) + assert as_numer_denom(n + x / (y - x / n)) == (y * n**2, y * n - x) + + def test_polynomial_atoms(self): + x = as_symbol("x") + y = as_symbol("y") + n = as_number(123) + + assert x.polynomial_atoms() == {x} + assert n.polynomial_atoms() == set() + assert (y[x]).polynomial_atoms() == {y[x]} + assert (y(x)).polynomial_atoms() == {y(x)} + assert (y(x) + x).polynomial_atoms() == {y(x), x} + assert (y(x) * x[y]).polynomial_atoms() == {y(x), x[y]} + assert (y(x)**x).polynomial_atoms() == {y(x)} diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_value_attrspec.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_value_attrspec.py new file mode 100644 index 0000000000000000000000000000000000000000..3855a6273288e7677c0ceb773924831b7e938182 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/test_value_attrspec.py @@ -0,0 +1,15 @@ +import os +import pytest + +from . import util + +class TestValueAttr(util.F2PyTest): + sources = [util.getpath("tests", "src", "value_attrspec", "gh21665.f90")] + + # gh-21665 + @pytest.mark.slow + def test_gh21665(self): + inp = 2 + out = self.module.fortfuncs.square(inp) + exp_out = 4 + assert out == exp_out diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/tests/util.py b/venv/lib/python3.12/site-packages/numpy/f2py/tests/util.py new file mode 100644 index 0000000000000000000000000000000000000000..eab827127e95dfdcc93e75b5b671034c0a093d79 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/tests/util.py @@ -0,0 +1,431 @@ +""" +Utility functions for + +- building and importing modules on test time, using a temporary location +- detecting if compilers are present +- determining paths to tests + +""" +import glob +import os +import sys +import subprocess +import tempfile +import shutil +import atexit +import textwrap +import re +import pytest +import contextlib +import numpy +import concurrent.futures + +from pathlib import Path +from numpy._utils import asunicode +from numpy.testing import temppath, IS_WASM +from importlib import import_module +from numpy.f2py._backends._meson import MesonBackend + +# +# Maintaining a temporary module directory +# + +_module_dir = None +_module_num = 5403 + +if sys.platform == "cygwin": + NUMPY_INSTALL_ROOT = Path(__file__).parent.parent.parent + _module_list = list(NUMPY_INSTALL_ROOT.glob("**/*.dll")) + + +def _cleanup(): + global _module_dir + if _module_dir is not None: + try: + sys.path.remove(_module_dir) + except ValueError: + pass + try: + shutil.rmtree(_module_dir) + except OSError: + pass + _module_dir = None + + +def get_module_dir(): + global _module_dir + if _module_dir is None: + _module_dir = tempfile.mkdtemp() + atexit.register(_cleanup) + if _module_dir not in sys.path: + sys.path.insert(0, _module_dir) + return _module_dir + + +def get_temp_module_name(): + # Assume single-threaded, and the module dir usable only by this thread + global _module_num + get_module_dir() + name = "_test_ext_module_%d" % _module_num + _module_num += 1 + if name in sys.modules: + # this should not be possible, but check anyway + raise RuntimeError("Temporary module name already in use.") + return name + + +def _memoize(func): + memo = {} + + def wrapper(*a, **kw): + key = repr((a, kw)) + if key not in memo: + try: + memo[key] = func(*a, **kw) + except Exception as e: + memo[key] = e + raise + ret = memo[key] + if isinstance(ret, Exception): + raise ret + return ret + + wrapper.__name__ = func.__name__ + return wrapper + + +# +# Building modules +# + + +@_memoize +def build_module(source_files, options=[], skip=[], only=[], module_name=None): + """ + Compile and import a f2py module, built from the given files. + + """ + + code = f"import sys; sys.path = {sys.path!r}; import numpy.f2py; numpy.f2py.main()" + + d = get_module_dir() + + # Copy files + dst_sources = [] + f2py_sources = [] + for fn in source_files: + if not os.path.isfile(fn): + raise RuntimeError("%s is not a file" % fn) + dst = os.path.join(d, os.path.basename(fn)) + shutil.copyfile(fn, dst) + dst_sources.append(dst) + + base, ext = os.path.splitext(dst) + if ext in (".f90", ".f95", ".f", ".c", ".pyf"): + f2py_sources.append(dst) + + assert f2py_sources + + # Prepare options + if module_name is None: + module_name = get_temp_module_name() + f2py_opts = ["-c", "-m", module_name] + options + f2py_sources + f2py_opts += ["--backend", "meson"] + if skip: + f2py_opts += ["skip:"] + skip + if only: + f2py_opts += ["only:"] + only + + # Build + cwd = os.getcwd() + try: + os.chdir(d) + cmd = [sys.executable, "-c", code] + f2py_opts + p = subprocess.Popen(cmd, + stdout=subprocess.PIPE, + stderr=subprocess.STDOUT) + out, err = p.communicate() + if p.returncode != 0: + raise RuntimeError("Running f2py failed: %s\n%s" % + (cmd[4:], asunicode(out))) + finally: + os.chdir(cwd) + + # Partial cleanup + for fn in dst_sources: + os.unlink(fn) + + # Rebase (Cygwin-only) + if sys.platform == "cygwin": + # If someone starts deleting modules after import, this will + # need to change to record how big each module is, rather than + # relying on rebase being able to find that from the files. + _module_list.extend( + glob.glob(os.path.join(d, "{:s}*".format(module_name))) + ) + subprocess.check_call( + ["/usr/bin/rebase", "--database", "--oblivious", "--verbose"] + + _module_list + ) + + # Import + return import_module(module_name) + + +@_memoize +def build_code(source_code, + options=[], + skip=[], + only=[], + suffix=None, + module_name=None): + """ + Compile and import Fortran code using f2py. + + """ + if suffix is None: + suffix = ".f" + with temppath(suffix=suffix) as path: + with open(path, "w") as f: + f.write(source_code) + return build_module([path], + options=options, + skip=skip, + only=only, + module_name=module_name) + + +# +# Check if compilers are available at all... +# + +def check_language(lang, code_snippet=None): + tmpdir = tempfile.mkdtemp() + try: + meson_file = os.path.join(tmpdir, "meson.build") + with open(meson_file, "w") as f: + f.write("project('check_compilers')\n") + f.write(f"add_languages('{lang}')\n") + if code_snippet: + f.write(f"{lang}_compiler = meson.get_compiler('{lang}')\n") + f.write(f"{lang}_code = '''{code_snippet}'''\n") + f.write( + f"_have_{lang}_feature =" + f"{lang}_compiler.compiles({lang}_code," + f" name: '{lang} feature check')\n" + ) + runmeson = subprocess.run( + ["meson", "setup", "btmp"], + check=False, + cwd=tmpdir, + stdout=subprocess.PIPE, + stderr=subprocess.PIPE, + ) + if runmeson.returncode == 0: + return True + else: + return False + finally: + shutil.rmtree(tmpdir) + return False + +fortran77_code = ''' +C Example Fortran 77 code + PROGRAM HELLO + PRINT *, 'Hello, Fortran 77!' + END +''' + +fortran90_code = ''' +! Example Fortran 90 code +program hello90 + type :: greeting + character(len=20) :: text + end type greeting + + type(greeting) :: greet + greet%text = 'hello, fortran 90!' + print *, greet%text +end program hello90 +''' + +# Dummy class for caching relevant checks +class CompilerChecker: + def __init__(self): + self.compilers_checked = False + self.has_c = False + self.has_f77 = False + self.has_f90 = False + + def check_compilers(self): + if (not self.compilers_checked) and (not sys.platform == "cygwin"): + with concurrent.futures.ThreadPoolExecutor() as executor: + futures = [ + executor.submit(check_language, "c"), + executor.submit(check_language, "fortran", fortran77_code), + executor.submit(check_language, "fortran", fortran90_code) + ] + + self.has_c = futures[0].result() + self.has_f77 = futures[1].result() + self.has_f90 = futures[2].result() + + self.compilers_checked = True + +if not IS_WASM: + checker = CompilerChecker() + checker.check_compilers() + +def has_c_compiler(): + return checker.has_c + +def has_f77_compiler(): + return checker.has_f77 + +def has_f90_compiler(): + return checker.has_f90 + +# +# Building with meson +# + + +class SimplifiedMesonBackend(MesonBackend): + def __init__(self, *args, **kwargs): + super().__init__(*args, **kwargs) + + def compile(self): + self.write_meson_build(self.build_dir) + self.run_meson(self.build_dir) + + +def build_meson(source_files, module_name=None, **kwargs): + """ + Build a module via Meson and import it. + """ + build_dir = get_module_dir() + if module_name is None: + module_name = get_temp_module_name() + + # Initialize the MesonBackend + backend = SimplifiedMesonBackend( + modulename=module_name, + sources=source_files, + extra_objects=kwargs.get("extra_objects", []), + build_dir=build_dir, + include_dirs=kwargs.get("include_dirs", []), + library_dirs=kwargs.get("library_dirs", []), + libraries=kwargs.get("libraries", []), + define_macros=kwargs.get("define_macros", []), + undef_macros=kwargs.get("undef_macros", []), + f2py_flags=kwargs.get("f2py_flags", []), + sysinfo_flags=kwargs.get("sysinfo_flags", []), + fc_flags=kwargs.get("fc_flags", []), + flib_flags=kwargs.get("flib_flags", []), + setup_flags=kwargs.get("setup_flags", []), + remove_build_dir=kwargs.get("remove_build_dir", False), + extra_dat=kwargs.get("extra_dat", {}), + ) + + # Compile the module + # NOTE: Catch-all since without distutils it is hard to determine which + # compiler stack is on the CI + try: + backend.compile() + except subprocess.CalledProcessError: + pytest.skip("Failed to compile module") + + # Import the compiled module + sys.path.insert(0, f"{build_dir}/{backend.meson_build_dir}") + return import_module(module_name) + + +# +# Unittest convenience +# + + +class F2PyTest: + code = None + sources = None + options = [] + skip = [] + only = [] + suffix = ".f" + module = None + _has_c_compiler = None + _has_f77_compiler = None + _has_f90_compiler = None + + @property + def module_name(self): + cls = type(self) + return f'_{cls.__module__.rsplit(".",1)[-1]}_{cls.__name__}_ext_module' + + @classmethod + def setup_class(cls): + if sys.platform == "win32": + pytest.skip("Fails with MinGW64 Gfortran (Issue #9673)") + F2PyTest._has_c_compiler = has_c_compiler() + F2PyTest._has_f77_compiler = has_f77_compiler() + F2PyTest._has_f90_compiler = has_f90_compiler() + + def setup_method(self): + if self.module is not None: + return + + codes = self.sources if self.sources else [] + if self.code: + codes.append(self.suffix) + + needs_f77 = any(str(fn).endswith(".f") for fn in codes) + needs_f90 = any(str(fn).endswith(".f90") for fn in codes) + needs_pyf = any(str(fn).endswith(".pyf") for fn in codes) + + if needs_f77 and not self._has_f77_compiler: + pytest.skip("No Fortran 77 compiler available") + if needs_f90 and not self._has_f90_compiler: + pytest.skip("No Fortran 90 compiler available") + if needs_pyf and not (self._has_f90_compiler or self._has_f77_compiler): + pytest.skip("No Fortran compiler available") + + # Build the module + if self.code is not None: + self.module = build_code( + self.code, + options=self.options, + skip=self.skip, + only=self.only, + suffix=self.suffix, + module_name=self.module_name, + ) + + if self.sources is not None: + self.module = build_module( + self.sources, + options=self.options, + skip=self.skip, + only=self.only, + module_name=self.module_name, + ) + + +# +# Helper functions +# + + +def getpath(*a): + # Package root + d = Path(numpy.f2py.__file__).parent.resolve() + return d.joinpath(*a) + + +@contextlib.contextmanager +def switchdir(path): + curpath = Path.cwd() + os.chdir(path) + try: + yield + finally: + os.chdir(curpath) diff --git a/venv/lib/python3.12/site-packages/numpy/f2py/use_rules.py b/venv/lib/python3.12/site-packages/numpy/f2py/use_rules.py new file mode 100644 index 0000000000000000000000000000000000000000..808b3dd97ec2aa9b2616a4ecdc1bfe672806a511 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/f2py/use_rules.py @@ -0,0 +1,106 @@ +""" +Build 'use others module data' mechanism for f2py2e. + +Copyright 1999 -- 2011 Pearu Peterson all rights reserved. +Copyright 2011 -- present NumPy Developers. +Permission to use, modify, and distribute this software is given under the +terms of the NumPy License. + +NO WARRANTY IS EXPRESSED OR IMPLIED. USE AT YOUR OWN RISK. +""" +__version__ = "$Revision: 1.3 $"[10:-1] + +f2py_version = 'See `f2py -v`' + + +from .auxfuncs import ( + applyrules, dictappend, gentitle, hasnote, outmess +) + + +usemodule_rules = { + 'body': """ +#begintitle# +static char doc_#apiname#[] = \"\\\nVariable wrapper signature:\\n\\ +\t #name# = get_#name#()\\n\\ +Arguments:\\n\\ +#docstr#\"; +extern F_MODFUNC(#usemodulename#,#USEMODULENAME#,#realname#,#REALNAME#); +static PyObject *#apiname#(PyObject *capi_self, PyObject *capi_args) { +/*#decl#*/ +\tif (!PyArg_ParseTuple(capi_args, \"\")) goto capi_fail; +printf(\"c: %d\\n\",F_MODFUNC(#usemodulename#,#USEMODULENAME#,#realname#,#REALNAME#)); +\treturn Py_BuildValue(\"\"); +capi_fail: +\treturn NULL; +} +""", + 'method': '\t{\"get_#name#\",#apiname#,METH_VARARGS|METH_KEYWORDS,doc_#apiname#},', + 'need': ['F_MODFUNC'] +} + +################ + + +def buildusevars(m, r): + ret = {} + outmess( + '\t\tBuilding use variable hooks for module "%s" (feature only for F90/F95)...\n' % (m['name'])) + varsmap = {} + revmap = {} + if 'map' in r: + for k in r['map'].keys(): + if r['map'][k] in revmap: + outmess('\t\t\tVariable "%s<=%s" is already mapped by "%s". Skipping.\n' % ( + r['map'][k], k, revmap[r['map'][k]])) + else: + revmap[r['map'][k]] = k + if 'only' in r and r['only']: + for v in r['map'].keys(): + if r['map'][v] in m['vars']: + + if revmap[r['map'][v]] == v: + varsmap[v] = r['map'][v] + else: + outmess('\t\t\tIgnoring map "%s=>%s". See above.\n' % + (v, r['map'][v])) + else: + outmess( + '\t\t\tNo definition for variable "%s=>%s". Skipping.\n' % (v, r['map'][v])) + else: + for v in m['vars'].keys(): + if v in revmap: + varsmap[v] = revmap[v] + else: + varsmap[v] = v + for v in varsmap.keys(): + ret = dictappend(ret, buildusevar(v, varsmap[v], m['vars'], m['name'])) + return ret + + +def buildusevar(name, realname, vars, usemodulename): + outmess('\t\t\tConstructing wrapper function for variable "%s=>%s"...\n' % ( + name, realname)) + ret = {} + vrd = {'name': name, + 'realname': realname, + 'REALNAME': realname.upper(), + 'usemodulename': usemodulename, + 'USEMODULENAME': usemodulename.upper(), + 'texname': name.replace('_', '\\_'), + 'begintitle': gentitle('%s=>%s' % (name, realname)), + 'endtitle': gentitle('end of %s=>%s' % (name, realname)), + 'apiname': '#modulename#_use_%s_from_%s' % (realname, usemodulename) + } + nummap = {0: 'Ro', 1: 'Ri', 2: 'Rii', 3: 'Riii', 4: 'Riv', + 5: 'Rv', 6: 'Rvi', 7: 'Rvii', 8: 'Rviii', 9: 'Rix'} + vrd['texnamename'] = name + for i in nummap.keys(): + vrd['texnamename'] = vrd['texnamename'].replace(repr(i), nummap[i]) + if hasnote(vars[realname]): + vrd['note'] = vars[realname]['note'] + rd = dictappend({}, vrd) + + print(name, realname, vars[realname]) + ret = applyrules(usemodule_rules, rd) + return ret diff --git a/venv/lib/python3.12/site-packages/numpy/fft/__init__.py b/venv/lib/python3.12/site-packages/numpy/fft/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..0f6e6373e856a428ac56bb4dc7ed36a45aac8f7b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/__init__.py @@ -0,0 +1,215 @@ +""" +Discrete Fourier Transform (:mod:`numpy.fft`) +============================================= + +.. currentmodule:: numpy.fft + +The SciPy module `scipy.fft` is a more comprehensive superset +of ``numpy.fft``, which includes only a basic set of routines. + +Standard FFTs +------------- + +.. autosummary:: + :toctree: generated/ + + fft Discrete Fourier transform. + ifft Inverse discrete Fourier transform. + fft2 Discrete Fourier transform in two dimensions. + ifft2 Inverse discrete Fourier transform in two dimensions. + fftn Discrete Fourier transform in N-dimensions. + ifftn Inverse discrete Fourier transform in N dimensions. + +Real FFTs +--------- + +.. autosummary:: + :toctree: generated/ + + rfft Real discrete Fourier transform. + irfft Inverse real discrete Fourier transform. + rfft2 Real discrete Fourier transform in two dimensions. + irfft2 Inverse real discrete Fourier transform in two dimensions. + rfftn Real discrete Fourier transform in N dimensions. + irfftn Inverse real discrete Fourier transform in N dimensions. + +Hermitian FFTs +-------------- + +.. autosummary:: + :toctree: generated/ + + hfft Hermitian discrete Fourier transform. + ihfft Inverse Hermitian discrete Fourier transform. + +Helper routines +--------------- + +.. autosummary:: + :toctree: generated/ + + fftfreq Discrete Fourier Transform sample frequencies. + rfftfreq DFT sample frequencies (for usage with rfft, irfft). + fftshift Shift zero-frequency component to center of spectrum. + ifftshift Inverse of fftshift. + + +Background information +---------------------- + +Fourier analysis is fundamentally a method for expressing a function as a +sum of periodic components, and for recovering the function from those +components. When both the function and its Fourier transform are +replaced with discretized counterparts, it is called the discrete Fourier +transform (DFT). The DFT has become a mainstay of numerical computing in +part because of a very fast algorithm for computing it, called the Fast +Fourier Transform (FFT), which was known to Gauss (1805) and was brought +to light in its current form by Cooley and Tukey [CT]_. Press et al. [NR]_ +provide an accessible introduction to Fourier analysis and its +applications. + +Because the discrete Fourier transform separates its input into +components that contribute at discrete frequencies, it has a great number +of applications in digital signal processing, e.g., for filtering, and in +this context the discretized input to the transform is customarily +referred to as a *signal*, which exists in the *time domain*. The output +is called a *spectrum* or *transform* and exists in the *frequency +domain*. + +Implementation details +---------------------- + +There are many ways to define the DFT, varying in the sign of the +exponent, normalization, etc. In this implementation, the DFT is defined +as + +.. math:: + A_k = \\sum_{m=0}^{n-1} a_m \\exp\\left\\{-2\\pi i{mk \\over n}\\right\\} + \\qquad k = 0,\\ldots,n-1. + +The DFT is in general defined for complex inputs and outputs, and a +single-frequency component at linear frequency :math:`f` is +represented by a complex exponential +:math:`a_m = \\exp\\{2\\pi i\\,f m\\Delta t\\}`, where :math:`\\Delta t` +is the sampling interval. + +The values in the result follow so-called "standard" order: If ``A = +fft(a, n)``, then ``A[0]`` contains the zero-frequency term (the sum of +the signal), which is always purely real for real inputs. Then ``A[1:n/2]`` +contains the positive-frequency terms, and ``A[n/2+1:]`` contains the +negative-frequency terms, in order of decreasingly negative frequency. +For an even number of input points, ``A[n/2]`` represents both positive and +negative Nyquist frequency, and is also purely real for real input. For +an odd number of input points, ``A[(n-1)/2]`` contains the largest positive +frequency, while ``A[(n+1)/2]`` contains the largest negative frequency. +The routine ``np.fft.fftfreq(n)`` returns an array giving the frequencies +of corresponding elements in the output. The routine +``np.fft.fftshift(A)`` shifts transforms and their frequencies to put the +zero-frequency components in the middle, and ``np.fft.ifftshift(A)`` undoes +that shift. + +When the input `a` is a time-domain signal and ``A = fft(a)``, ``np.abs(A)`` +is its amplitude spectrum and ``np.abs(A)**2`` is its power spectrum. +The phase spectrum is obtained by ``np.angle(A)``. + +The inverse DFT is defined as + +.. math:: + a_m = \\frac{1}{n}\\sum_{k=0}^{n-1}A_k\\exp\\left\\{2\\pi i{mk\\over n}\\right\\} + \\qquad m = 0,\\ldots,n-1. + +It differs from the forward transform by the sign of the exponential +argument and the default normalization by :math:`1/n`. + +Type Promotion +-------------- + +`numpy.fft` promotes ``float32`` and ``complex64`` arrays to ``float64`` and +``complex128`` arrays respectively. For an FFT implementation that does not +promote input arrays, see `scipy.fftpack`. + +Normalization +------------- + +The argument ``norm`` indicates which direction of the pair of direct/inverse +transforms is scaled and with what normalization factor. +The default normalization (``"backward"``) has the direct (forward) transforms +unscaled and the inverse (backward) transforms scaled by :math:`1/n`. It is +possible to obtain unitary transforms by setting the keyword argument ``norm`` +to ``"ortho"`` so that both direct and inverse transforms are scaled by +:math:`1/\\sqrt{n}`. Finally, setting the keyword argument ``norm`` to +``"forward"`` has the direct transforms scaled by :math:`1/n` and the inverse +transforms unscaled (i.e. exactly opposite to the default ``"backward"``). +`None` is an alias of the default option ``"backward"`` for backward +compatibility. + +Real and Hermitian transforms +----------------------------- + +When the input is purely real, its transform is Hermitian, i.e., the +component at frequency :math:`f_k` is the complex conjugate of the +component at frequency :math:`-f_k`, which means that for real +inputs there is no information in the negative frequency components that +is not already available from the positive frequency components. +The family of `rfft` functions is +designed to operate on real inputs, and exploits this symmetry by +computing only the positive frequency components, up to and including the +Nyquist frequency. Thus, ``n`` input points produce ``n/2+1`` complex +output points. The inverses of this family assumes the same symmetry of +its input, and for an output of ``n`` points uses ``n/2+1`` input points. + +Correspondingly, when the spectrum is purely real, the signal is +Hermitian. The `hfft` family of functions exploits this symmetry by +using ``n/2+1`` complex points in the input (time) domain for ``n`` real +points in the frequency domain. + +In higher dimensions, FFTs are used, e.g., for image analysis and +filtering. The computational efficiency of the FFT means that it can +also be a faster way to compute large convolutions, using the property +that a convolution in the time domain is equivalent to a point-by-point +multiplication in the frequency domain. + +Higher dimensions +----------------- + +In two dimensions, the DFT is defined as + +.. math:: + A_{kl} = \\sum_{m=0}^{M-1} \\sum_{n=0}^{N-1} + a_{mn}\\exp\\left\\{-2\\pi i \\left({mk\\over M}+{nl\\over N}\\right)\\right\\} + \\qquad k = 0, \\ldots, M-1;\\quad l = 0, \\ldots, N-1, + +which extends in the obvious way to higher dimensions, and the inverses +in higher dimensions also extend in the same way. + +References +---------- + +.. [CT] Cooley, James W., and John W. Tukey, 1965, "An algorithm for the + machine calculation of complex Fourier series," *Math. Comput.* + 19: 297-301. + +.. [NR] Press, W., Teukolsky, S., Vetterline, W.T., and Flannery, B.P., + 2007, *Numerical Recipes: The Art of Scientific Computing*, ch. + 12-13. Cambridge Univ. Press, Cambridge, UK. + +Examples +-------- + +For examples, see the various functions. + +""" + +from . import _pocketfft, _helper +# TODO: `numpy.fft.helper`` was deprecated in NumPy 2.0. It should +# be deleted once downstream libraries move to `numpy.fft`. +from . import helper +from ._pocketfft import * +from ._helper import * + +__all__ = _pocketfft.__all__.copy() +__all__ += _helper.__all__ + +from numpy._pytesttester import PytestTester +test = PytestTester(__name__) +del PytestTester diff --git a/venv/lib/python3.12/site-packages/numpy/fft/__init__.pyi b/venv/lib/python3.12/site-packages/numpy/fft/__init__.pyi new file mode 100644 index 0000000000000000000000000000000000000000..504baff265a63e8451cee08913e9530c71f4751f --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/__init__.pyi @@ -0,0 +1,28 @@ +from numpy._pytesttester import PytestTester + +from numpy.fft._pocketfft import ( + fft as fft, + ifft as ifft, + rfft as rfft, + irfft as irfft, + hfft as hfft, + ihfft as ihfft, + rfftn as rfftn, + irfftn as irfftn, + rfft2 as rfft2, + irfft2 as irfft2, + fft2 as fft2, + ifft2 as ifft2, + fftn as fftn, + ifftn as ifftn, +) + +from numpy.fft._helper import ( + fftshift as fftshift, + ifftshift as ifftshift, + fftfreq as fftfreq, + rfftfreq as rfftfreq, +) + +__all__: list[str] +test: PytestTester diff --git a/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/__init__.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/__init__.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..a022fa20931b84d050c9d26e6672aabab15883fe Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/__init__.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/_helper.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/_helper.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..01c6ca25ca550aecf1ee1d7ca34c9c196f7e3213 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/_helper.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/_pocketfft.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/_pocketfft.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..8897512abdb1e8a27a203dd777e67c131ba52edf Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/_pocketfft.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/helper.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/helper.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..cb769580ff99535a8d6aaa1bb703a68d9dc81795 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/fft/__pycache__/helper.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/fft/_helper.py b/venv/lib/python3.12/site-packages/numpy/fft/_helper.py new file mode 100644 index 0000000000000000000000000000000000000000..9f4512f9071574b51daf07f312804effab8ed05a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/_helper.py @@ -0,0 +1,231 @@ +""" +Discrete Fourier Transforms - _helper.py + +""" +from numpy._core import integer, empty, arange, asarray, roll +from numpy._core.overrides import array_function_dispatch, set_module + +# Created by Pearu Peterson, September 2002 + +__all__ = ['fftshift', 'ifftshift', 'fftfreq', 'rfftfreq'] + +integer_types = (int, integer) + + +def _fftshift_dispatcher(x, axes=None): + return (x,) + + +@array_function_dispatch(_fftshift_dispatcher, module='numpy.fft') +def fftshift(x, axes=None): + """ + Shift the zero-frequency component to the center of the spectrum. + + This function swaps half-spaces for all axes listed (defaults to all). + Note that ``y[0]`` is the Nyquist component only if ``len(x)`` is even. + + Parameters + ---------- + x : array_like + Input array. + axes : int or shape tuple, optional + Axes over which to shift. Default is None, which shifts all axes. + + Returns + ------- + y : ndarray + The shifted array. + + See Also + -------- + ifftshift : The inverse of `fftshift`. + + Examples + -------- + >>> freqs = np.fft.fftfreq(10, 0.1) + >>> freqs + array([ 0., 1., 2., ..., -3., -2., -1.]) + >>> np.fft.fftshift(freqs) + array([-5., -4., -3., -2., -1., 0., 1., 2., 3., 4.]) + + Shift the zero-frequency component only along the second axis: + + >>> freqs = np.fft.fftfreq(9, d=1./9).reshape(3, 3) + >>> freqs + array([[ 0., 1., 2.], + [ 3., 4., -4.], + [-3., -2., -1.]]) + >>> np.fft.fftshift(freqs, axes=(1,)) + array([[ 2., 0., 1.], + [-4., 3., 4.], + [-1., -3., -2.]]) + + """ + x = asarray(x) + if axes is None: + axes = tuple(range(x.ndim)) + shift = [dim // 2 for dim in x.shape] + elif isinstance(axes, integer_types): + shift = x.shape[axes] // 2 + else: + shift = [x.shape[ax] // 2 for ax in axes] + + return roll(x, shift, axes) + + +@array_function_dispatch(_fftshift_dispatcher, module='numpy.fft') +def ifftshift(x, axes=None): + """ + The inverse of `fftshift`. Although identical for even-length `x`, the + functions differ by one sample for odd-length `x`. + + Parameters + ---------- + x : array_like + Input array. + axes : int or shape tuple, optional + Axes over which to calculate. Defaults to None, which shifts all axes. + + Returns + ------- + y : ndarray + The shifted array. + + See Also + -------- + fftshift : Shift zero-frequency component to the center of the spectrum. + + Examples + -------- + >>> freqs = np.fft.fftfreq(9, d=1./9).reshape(3, 3) + >>> freqs + array([[ 0., 1., 2.], + [ 3., 4., -4.], + [-3., -2., -1.]]) + >>> np.fft.ifftshift(np.fft.fftshift(freqs)) + array([[ 0., 1., 2.], + [ 3., 4., -4.], + [-3., -2., -1.]]) + + """ + x = asarray(x) + if axes is None: + axes = tuple(range(x.ndim)) + shift = [-(dim // 2) for dim in x.shape] + elif isinstance(axes, integer_types): + shift = -(x.shape[axes] // 2) + else: + shift = [-(x.shape[ax] // 2) for ax in axes] + + return roll(x, shift, axes) + + +@set_module('numpy.fft') +def fftfreq(n, d=1.0, device=None): + """ + Return the Discrete Fourier Transform sample frequencies. + + The returned float array `f` contains the frequency bin centers in cycles + per unit of the sample spacing (with zero at the start). For instance, if + the sample spacing is in seconds, then the frequency unit is cycles/second. + + Given a window length `n` and a sample spacing `d`:: + + f = [0, 1, ..., n/2-1, -n/2, ..., -1] / (d*n) if n is even + f = [0, 1, ..., (n-1)/2, -(n-1)/2, ..., -1] / (d*n) if n is odd + + Parameters + ---------- + n : int + Window length. + d : scalar, optional + Sample spacing (inverse of the sampling rate). Defaults to 1. + device : str, optional + The device on which to place the created array. Default: ``None``. + For Array-API interoperability only, so must be ``"cpu"`` if passed. + + .. versionadded:: 2.0.0 + + Returns + ------- + f : ndarray + Array of length `n` containing the sample frequencies. + + Examples + -------- + >>> signal = np.array([-2, 8, 6, 4, 1, 0, 3, 5], dtype=float) + >>> fourier = np.fft.fft(signal) + >>> n = signal.size + >>> timestep = 0.1 + >>> freq = np.fft.fftfreq(n, d=timestep) + >>> freq + array([ 0. , 1.25, 2.5 , ..., -3.75, -2.5 , -1.25]) + + """ + if not isinstance(n, integer_types): + raise ValueError("n should be an integer") + val = 1.0 / (n * d) + results = empty(n, int, device=device) + N = (n-1)//2 + 1 + p1 = arange(0, N, dtype=int, device=device) + results[:N] = p1 + p2 = arange(-(n//2), 0, dtype=int, device=device) + results[N:] = p2 + return results * val + + +@set_module('numpy.fft') +def rfftfreq(n, d=1.0, device=None): + """ + Return the Discrete Fourier Transform sample frequencies + (for usage with rfft, irfft). + + The returned float array `f` contains the frequency bin centers in cycles + per unit of the sample spacing (with zero at the start). For instance, if + the sample spacing is in seconds, then the frequency unit is cycles/second. + + Given a window length `n` and a sample spacing `d`:: + + f = [0, 1, ..., n/2-1, n/2] / (d*n) if n is even + f = [0, 1, ..., (n-1)/2-1, (n-1)/2] / (d*n) if n is odd + + Unlike `fftfreq` (but like `scipy.fftpack.rfftfreq`) + the Nyquist frequency component is considered to be positive. + + Parameters + ---------- + n : int + Window length. + d : scalar, optional + Sample spacing (inverse of the sampling rate). Defaults to 1. + device : str, optional + The device on which to place the created array. Default: ``None``. + For Array-API interoperability only, so must be ``"cpu"`` if passed. + + .. versionadded:: 2.0.0 + + Returns + ------- + f : ndarray + Array of length ``n//2 + 1`` containing the sample frequencies. + + Examples + -------- + >>> signal = np.array([-2, 8, 6, 4, 1, 0, 3, 5, -3, 4], dtype=float) + >>> fourier = np.fft.rfft(signal) + >>> n = signal.size + >>> sample_rate = 100 + >>> freq = np.fft.fftfreq(n, d=1./sample_rate) + >>> freq + array([ 0., 10., 20., ..., -30., -20., -10.]) + >>> freq = np.fft.rfftfreq(n, d=1./sample_rate) + >>> freq + array([ 0., 10., 20., 30., 40., 50.]) + + """ + if not isinstance(n, integer_types): + raise ValueError("n should be an integer") + val = 1.0/(n*d) + N = n//2 + 1 + results = arange(0, N, dtype=int, device=device) + return results * val diff --git a/venv/lib/python3.12/site-packages/numpy/fft/_helper.pyi b/venv/lib/python3.12/site-packages/numpy/fft/_helper.pyi new file mode 100644 index 0000000000000000000000000000000000000000..a3c17fc675e7419470e1b97e0e73e33de27ad5a9 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/_helper.pyi @@ -0,0 +1,51 @@ +from typing import Any, TypeVar, overload, Literal as L + +from numpy import generic, integer, floating, complexfloating +from numpy._typing import ( + NDArray, + ArrayLike, + _ShapeLike, + _ArrayLike, + _ArrayLikeFloat_co, + _ArrayLikeComplex_co, +) + +_SCT = TypeVar("_SCT", bound=generic) + +__all__: list[str] + +@overload +def fftshift(x: _ArrayLike[_SCT], axes: None | _ShapeLike = ...) -> NDArray[_SCT]: ... +@overload +def fftshift(x: ArrayLike, axes: None | _ShapeLike = ...) -> NDArray[Any]: ... + +@overload +def ifftshift(x: _ArrayLike[_SCT], axes: None | _ShapeLike = ...) -> NDArray[_SCT]: ... +@overload +def ifftshift(x: ArrayLike, axes: None | _ShapeLike = ...) -> NDArray[Any]: ... + +@overload +def fftfreq( + n: int | integer[Any], + d: _ArrayLikeFloat_co = ..., + device: None | L["cpu"] = ..., +) -> NDArray[floating[Any]]: ... +@overload +def fftfreq( + n: int | integer[Any], + d: _ArrayLikeComplex_co = ..., + device: None | L["cpu"] = ..., +) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def rfftfreq( + n: int | integer[Any], + d: _ArrayLikeFloat_co = ..., + device: None | L["cpu"] = ..., +) -> NDArray[floating[Any]]: ... +@overload +def rfftfreq( + n: int | integer[Any], + d: _ArrayLikeComplex_co = ..., + device: None | L["cpu"] = ..., +) -> NDArray[complexfloating[Any, Any]]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/fft/_pocketfft.py b/venv/lib/python3.12/site-packages/numpy/fft/_pocketfft.py new file mode 100644 index 0000000000000000000000000000000000000000..d91b92c63f4b6159bb5fcf17365bd38c2dddb209 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/_pocketfft.py @@ -0,0 +1,1701 @@ +""" +Discrete Fourier Transforms + +Routines in this module: + +fft(a, n=None, axis=-1, norm="backward") +ifft(a, n=None, axis=-1, norm="backward") +rfft(a, n=None, axis=-1, norm="backward") +irfft(a, n=None, axis=-1, norm="backward") +hfft(a, n=None, axis=-1, norm="backward") +ihfft(a, n=None, axis=-1, norm="backward") +fftn(a, s=None, axes=None, norm="backward") +ifftn(a, s=None, axes=None, norm="backward") +rfftn(a, s=None, axes=None, norm="backward") +irfftn(a, s=None, axes=None, norm="backward") +fft2(a, s=None, axes=(-2,-1), norm="backward") +ifft2(a, s=None, axes=(-2, -1), norm="backward") +rfft2(a, s=None, axes=(-2,-1), norm="backward") +irfft2(a, s=None, axes=(-2, -1), norm="backward") + +i = inverse transform +r = transform of purely real data +h = Hermite transform +n = n-dimensional transform +2 = 2-dimensional transform +(Note: 2D routines are just nD routines with different default +behavior.) + +""" +__all__ = ['fft', 'ifft', 'rfft', 'irfft', 'hfft', 'ihfft', 'rfftn', + 'irfftn', 'rfft2', 'irfft2', 'fft2', 'ifft2', 'fftn', 'ifftn'] + +import functools +import warnings + +from numpy.lib.array_utils import normalize_axis_index +from numpy._core import (asarray, empty_like, result_type, + conjugate, take, sqrt, reciprocal) +from . import _pocketfft_umath as pfu +from numpy._core import overrides + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy.fft') + + +# `inv_norm` is a float by which the result of the transform needs to be +# divided. This replaces the original, more intuitive 'fct` parameter to avoid +# divisions by zero (or alternatively additional checks) in the case of +# zero-length axes during its computation. +def _raw_fft(a, n, axis, is_real, is_forward, norm, out=None): + if n < 1: + raise ValueError(f"Invalid number of FFT data points ({n}) specified.") + + # Calculate the normalization factor, passing in the array dtype to + # avoid precision loss in the possible sqrt or reciprocal. + if not is_forward: + norm = _swap_direction(norm) + + real_dtype = result_type(a.real.dtype, 1.0) + if norm is None or norm == "backward": + fct = 1 + elif norm == "ortho": + fct = reciprocal(sqrt(n, dtype=real_dtype)) + elif norm == "forward": + fct = reciprocal(n, dtype=real_dtype) + else: + raise ValueError(f'Invalid norm value {norm}; should be "backward",' + '"ortho" or "forward".') + + n_out = n + if is_real: + if is_forward: + ufunc = pfu.rfft_n_even if n % 2 == 0 else pfu.rfft_n_odd + n_out = n // 2 + 1 + else: + ufunc = pfu.irfft + else: + ufunc = pfu.fft if is_forward else pfu.ifft + + axis = normalize_axis_index(axis, a.ndim) + + if out is None: + if is_real and not is_forward: # irfft, complex in, real output. + out_dtype = real_dtype + else: # Others, complex output. + out_dtype = result_type(a.dtype, 1j) + out = empty_like(a, shape=a.shape[:axis] + (n_out,) + a.shape[axis+1:], + dtype=out_dtype) + elif ((shape := getattr(out, "shape", None)) is not None + and (len(shape) != a.ndim or shape[axis] != n_out)): + raise ValueError("output array has wrong shape.") + + return ufunc(a, fct, axes=[(axis,), (), (axis,)], out=out) + + +_SWAP_DIRECTION_MAP = {"backward": "forward", None: "forward", + "ortho": "ortho", "forward": "backward"} + + +def _swap_direction(norm): + try: + return _SWAP_DIRECTION_MAP[norm] + except KeyError: + raise ValueError(f'Invalid norm value {norm}; should be "backward", ' + '"ortho" or "forward".') from None + + +def _fft_dispatcher(a, n=None, axis=None, norm=None, out=None): + return (a, out) + + +@array_function_dispatch(_fft_dispatcher) +def fft(a, n=None, axis=-1, norm=None, out=None): + """ + Compute the one-dimensional discrete Fourier Transform. + + This function computes the one-dimensional *n*-point discrete Fourier + Transform (DFT) with the efficient Fast Fourier Transform (FFT) + algorithm [CT]. + + Parameters + ---------- + a : array_like + Input array, can be complex. + n : int, optional + Length of the transformed axis of the output. + If `n` is smaller than the length of the input, the input is cropped. + If it is larger, the input is padded with zeros. If `n` is not given, + the length of the input along the axis specified by `axis` is used. + axis : int, optional + Axis over which to compute the FFT. If not given, the last axis is + used. + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : complex ndarray + The truncated or zero-padded input, transformed along the axis + indicated by `axis`, or the last one if `axis` is not specified. + + Raises + ------ + IndexError + If `axis` is not a valid axis of `a`. + + See Also + -------- + numpy.fft : for definition of the DFT and conventions used. + ifft : The inverse of `fft`. + fft2 : The two-dimensional FFT. + fftn : The *n*-dimensional FFT. + rfftn : The *n*-dimensional FFT of real input. + fftfreq : Frequency bins for given FFT parameters. + + Notes + ----- + FFT (Fast Fourier Transform) refers to a way the discrete Fourier + Transform (DFT) can be calculated efficiently, by using symmetries in the + calculated terms. The symmetry is highest when `n` is a power of 2, and + the transform is therefore most efficient for these sizes. + + The DFT is defined, with the conventions used in this implementation, in + the documentation for the `numpy.fft` module. + + References + ---------- + .. [CT] Cooley, James W., and John W. Tukey, 1965, "An algorithm for the + machine calculation of complex Fourier series," *Math. Comput.* + 19: 297-301. + + Examples + -------- + >>> np.fft.fft(np.exp(2j * np.pi * np.arange(8) / 8)) + array([-2.33486982e-16+1.14423775e-17j, 8.00000000e+00-1.25557246e-15j, + 2.33486982e-16+2.33486982e-16j, 0.00000000e+00+1.22464680e-16j, + -1.14423775e-17+2.33486982e-16j, 0.00000000e+00+5.20784380e-16j, + 1.14423775e-17+1.14423775e-17j, 0.00000000e+00+1.22464680e-16j]) + + In this example, real input has an FFT which is Hermitian, i.e., symmetric + in the real part and anti-symmetric in the imaginary part, as described in + the `numpy.fft` documentation: + + >>> import matplotlib.pyplot as plt + >>> t = np.arange(256) + >>> sp = np.fft.fft(np.sin(t)) + >>> freq = np.fft.fftfreq(t.shape[-1]) + >>> plt.plot(freq, sp.real, freq, sp.imag) + [, ] + >>> plt.show() + + """ + a = asarray(a) + if n is None: + n = a.shape[axis] + output = _raw_fft(a, n, axis, False, True, norm, out) + return output + + +@array_function_dispatch(_fft_dispatcher) +def ifft(a, n=None, axis=-1, norm=None, out=None): + """ + Compute the one-dimensional inverse discrete Fourier Transform. + + This function computes the inverse of the one-dimensional *n*-point + discrete Fourier transform computed by `fft`. In other words, + ``ifft(fft(a)) == a`` to within numerical accuracy. + For a general description of the algorithm and definitions, + see `numpy.fft`. + + The input should be ordered in the same way as is returned by `fft`, + i.e., + + * ``a[0]`` should contain the zero frequency term, + * ``a[1:n//2]`` should contain the positive-frequency terms, + * ``a[n//2 + 1:]`` should contain the negative-frequency terms, in + increasing order starting from the most negative frequency. + + For an even number of input points, ``A[n//2]`` represents the sum of + the values at the positive and negative Nyquist frequencies, as the two + are aliased together. See `numpy.fft` for details. + + Parameters + ---------- + a : array_like + Input array, can be complex. + n : int, optional + Length of the transformed axis of the output. + If `n` is smaller than the length of the input, the input is cropped. + If it is larger, the input is padded with zeros. If `n` is not given, + the length of the input along the axis specified by `axis` is used. + See notes about padding issues. + axis : int, optional + Axis over which to compute the inverse DFT. If not given, the last + axis is used. + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : complex ndarray + The truncated or zero-padded input, transformed along the axis + indicated by `axis`, or the last one if `axis` is not specified. + + Raises + ------ + IndexError + If `axis` is not a valid axis of `a`. + + See Also + -------- + numpy.fft : An introduction, with definitions and general explanations. + fft : The one-dimensional (forward) FFT, of which `ifft` is the inverse + ifft2 : The two-dimensional inverse FFT. + ifftn : The n-dimensional inverse FFT. + + Notes + ----- + If the input parameter `n` is larger than the size of the input, the input + is padded by appending zeros at the end. Even though this is the common + approach, it might lead to surprising results. If a different padding is + desired, it must be performed before calling `ifft`. + + Examples + -------- + >>> np.fft.ifft([0, 4, 0, 0]) + array([ 1.+0.j, 0.+1.j, -1.+0.j, 0.-1.j]) # may vary + + Create and plot a band-limited signal with random phases: + + >>> import matplotlib.pyplot as plt + >>> t = np.arange(400) + >>> n = np.zeros((400,), dtype=complex) + >>> n[40:60] = np.exp(1j*np.random.uniform(0, 2*np.pi, (20,))) + >>> s = np.fft.ifft(n) + >>> plt.plot(t, s.real, label='real') + [] + >>> plt.plot(t, s.imag, '--', label='imaginary') + [] + >>> plt.legend() + + >>> plt.show() + + """ + a = asarray(a) + if n is None: + n = a.shape[axis] + output = _raw_fft(a, n, axis, False, False, norm, out=out) + return output + + +@array_function_dispatch(_fft_dispatcher) +def rfft(a, n=None, axis=-1, norm=None, out=None): + """ + Compute the one-dimensional discrete Fourier Transform for real input. + + This function computes the one-dimensional *n*-point discrete Fourier + Transform (DFT) of a real-valued array by means of an efficient algorithm + called the Fast Fourier Transform (FFT). + + Parameters + ---------- + a : array_like + Input array + n : int, optional + Number of points along transformation axis in the input to use. + If `n` is smaller than the length of the input, the input is cropped. + If it is larger, the input is padded with zeros. If `n` is not given, + the length of the input along the axis specified by `axis` is used. + axis : int, optional + Axis over which to compute the FFT. If not given, the last axis is + used. + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : complex ndarray + The truncated or zero-padded input, transformed along the axis + indicated by `axis`, or the last one if `axis` is not specified. + If `n` is even, the length of the transformed axis is ``(n/2)+1``. + If `n` is odd, the length is ``(n+1)/2``. + + Raises + ------ + IndexError + If `axis` is not a valid axis of `a`. + + See Also + -------- + numpy.fft : For definition of the DFT and conventions used. + irfft : The inverse of `rfft`. + fft : The one-dimensional FFT of general (complex) input. + fftn : The *n*-dimensional FFT. + rfftn : The *n*-dimensional FFT of real input. + + Notes + ----- + When the DFT is computed for purely real input, the output is + Hermitian-symmetric, i.e. the negative frequency terms are just the complex + conjugates of the corresponding positive-frequency terms, and the + negative-frequency terms are therefore redundant. This function does not + compute the negative frequency terms, and the length of the transformed + axis of the output is therefore ``n//2 + 1``. + + When ``A = rfft(a)`` and fs is the sampling frequency, ``A[0]`` contains + the zero-frequency term 0*fs, which is real due to Hermitian symmetry. + + If `n` is even, ``A[-1]`` contains the term representing both positive + and negative Nyquist frequency (+fs/2 and -fs/2), and must also be purely + real. If `n` is odd, there is no term at fs/2; ``A[-1]`` contains + the largest positive frequency (fs/2*(n-1)/n), and is complex in the + general case. + + If the input `a` contains an imaginary part, it is silently discarded. + + Examples + -------- + >>> np.fft.fft([0, 1, 0, 0]) + array([ 1.+0.j, 0.-1.j, -1.+0.j, 0.+1.j]) # may vary + >>> np.fft.rfft([0, 1, 0, 0]) + array([ 1.+0.j, 0.-1.j, -1.+0.j]) # may vary + + Notice how the final element of the `fft` output is the complex conjugate + of the second element, for real input. For `rfft`, this symmetry is + exploited to compute only the non-negative frequency terms. + + """ + a = asarray(a) + if n is None: + n = a.shape[axis] + output = _raw_fft(a, n, axis, True, True, norm, out=out) + return output + + +@array_function_dispatch(_fft_dispatcher) +def irfft(a, n=None, axis=-1, norm=None, out=None): + """ + Computes the inverse of `rfft`. + + This function computes the inverse of the one-dimensional *n*-point + discrete Fourier Transform of real input computed by `rfft`. + In other words, ``irfft(rfft(a), len(a)) == a`` to within numerical + accuracy. (See Notes below for why ``len(a)`` is necessary here.) + + The input is expected to be in the form returned by `rfft`, i.e. the + real zero-frequency term followed by the complex positive frequency terms + in order of increasing frequency. Since the discrete Fourier Transform of + real input is Hermitian-symmetric, the negative frequency terms are taken + to be the complex conjugates of the corresponding positive frequency terms. + + Parameters + ---------- + a : array_like + The input array. + n : int, optional + Length of the transformed axis of the output. + For `n` output points, ``n//2+1`` input points are necessary. If the + input is longer than this, it is cropped. If it is shorter than this, + it is padded with zeros. If `n` is not given, it is taken to be + ``2*(m-1)`` where ``m`` is the length of the input along the axis + specified by `axis`. + axis : int, optional + Axis over which to compute the inverse FFT. If not given, the last + axis is used. + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : ndarray + The truncated or zero-padded input, transformed along the axis + indicated by `axis`, or the last one if `axis` is not specified. + The length of the transformed axis is `n`, or, if `n` is not given, + ``2*(m-1)`` where ``m`` is the length of the transformed axis of the + input. To get an odd number of output points, `n` must be specified. + + Raises + ------ + IndexError + If `axis` is not a valid axis of `a`. + + See Also + -------- + numpy.fft : For definition of the DFT and conventions used. + rfft : The one-dimensional FFT of real input, of which `irfft` is inverse. + fft : The one-dimensional FFT. + irfft2 : The inverse of the two-dimensional FFT of real input. + irfftn : The inverse of the *n*-dimensional FFT of real input. + + Notes + ----- + Returns the real valued `n`-point inverse discrete Fourier transform + of `a`, where `a` contains the non-negative frequency terms of a + Hermitian-symmetric sequence. `n` is the length of the result, not the + input. + + If you specify an `n` such that `a` must be zero-padded or truncated, the + extra/removed values will be added/removed at high frequencies. One can + thus resample a series to `m` points via Fourier interpolation by: + ``a_resamp = irfft(rfft(a), m)``. + + The correct interpretation of the hermitian input depends on the length of + the original data, as given by `n`. This is because each input shape could + correspond to either an odd or even length signal. By default, `irfft` + assumes an even output length which puts the last entry at the Nyquist + frequency; aliasing with its symmetric counterpart. By Hermitian symmetry, + the value is thus treated as purely real. To avoid losing information, the + correct length of the real input **must** be given. + + Examples + -------- + >>> np.fft.ifft([1, -1j, -1, 1j]) + array([0.+0.j, 1.+0.j, 0.+0.j, 0.+0.j]) # may vary + >>> np.fft.irfft([1, -1j, -1]) + array([0., 1., 0., 0.]) + + Notice how the last term in the input to the ordinary `ifft` is the + complex conjugate of the second term, and the output has zero imaginary + part everywhere. When calling `irfft`, the negative frequencies are not + specified, and the output array is purely real. + + """ + a = asarray(a) + if n is None: + n = (a.shape[axis] - 1) * 2 + output = _raw_fft(a, n, axis, True, False, norm, out=out) + return output + + +@array_function_dispatch(_fft_dispatcher) +def hfft(a, n=None, axis=-1, norm=None, out=None): + """ + Compute the FFT of a signal that has Hermitian symmetry, i.e., a real + spectrum. + + Parameters + ---------- + a : array_like + The input array. + n : int, optional + Length of the transformed axis of the output. For `n` output + points, ``n//2 + 1`` input points are necessary. If the input is + longer than this, it is cropped. If it is shorter than this, it is + padded with zeros. If `n` is not given, it is taken to be ``2*(m-1)`` + where ``m`` is the length of the input along the axis specified by + `axis`. + axis : int, optional + Axis over which to compute the FFT. If not given, the last + axis is used. + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : ndarray + The truncated or zero-padded input, transformed along the axis + indicated by `axis`, or the last one if `axis` is not specified. + The length of the transformed axis is `n`, or, if `n` is not given, + ``2*m - 2`` where ``m`` is the length of the transformed axis of + the input. To get an odd number of output points, `n` must be + specified, for instance as ``2*m - 1`` in the typical case, + + Raises + ------ + IndexError + If `axis` is not a valid axis of `a`. + + See also + -------- + rfft : Compute the one-dimensional FFT for real input. + ihfft : The inverse of `hfft`. + + Notes + ----- + `hfft`/`ihfft` are a pair analogous to `rfft`/`irfft`, but for the + opposite case: here the signal has Hermitian symmetry in the time + domain and is real in the frequency domain. So here it's `hfft` for + which you must supply the length of the result if it is to be odd. + + * even: ``ihfft(hfft(a, 2*len(a) - 2)) == a``, within roundoff error, + * odd: ``ihfft(hfft(a, 2*len(a) - 1)) == a``, within roundoff error. + + The correct interpretation of the hermitian input depends on the length of + the original data, as given by `n`. This is because each input shape could + correspond to either an odd or even length signal. By default, `hfft` + assumes an even output length which puts the last entry at the Nyquist + frequency; aliasing with its symmetric counterpart. By Hermitian symmetry, + the value is thus treated as purely real. To avoid losing information, the + shape of the full signal **must** be given. + + Examples + -------- + >>> signal = np.array([1, 2, 3, 4, 3, 2]) + >>> np.fft.fft(signal) + array([15.+0.j, -4.+0.j, 0.+0.j, -1.-0.j, 0.+0.j, -4.+0.j]) # may vary + >>> np.fft.hfft(signal[:4]) # Input first half of signal + array([15., -4., 0., -1., 0., -4.]) + >>> np.fft.hfft(signal, 6) # Input entire signal and truncate + array([15., -4., 0., -1., 0., -4.]) + + + >>> signal = np.array([[1, 1.j], [-1.j, 2]]) + >>> np.conj(signal.T) - signal # check Hermitian symmetry + array([[ 0.-0.j, -0.+0.j], # may vary + [ 0.+0.j, 0.-0.j]]) + >>> freq_spectrum = np.fft.hfft(signal) + >>> freq_spectrum + array([[ 1., 1.], + [ 2., -2.]]) + + """ + a = asarray(a) + if n is None: + n = (a.shape[axis] - 1) * 2 + new_norm = _swap_direction(norm) + output = irfft(conjugate(a), n, axis, norm=new_norm, out=None) + return output + + +@array_function_dispatch(_fft_dispatcher) +def ihfft(a, n=None, axis=-1, norm=None, out=None): + """ + Compute the inverse FFT of a signal that has Hermitian symmetry. + + Parameters + ---------- + a : array_like + Input array. + n : int, optional + Length of the inverse FFT, the number of points along + transformation axis in the input to use. If `n` is smaller than + the length of the input, the input is cropped. If it is larger, + the input is padded with zeros. If `n` is not given, the length of + the input along the axis specified by `axis` is used. + axis : int, optional + Axis over which to compute the inverse FFT. If not given, the last + axis is used. + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : complex ndarray + The truncated or zero-padded input, transformed along the axis + indicated by `axis`, or the last one if `axis` is not specified. + The length of the transformed axis is ``n//2 + 1``. + + See also + -------- + hfft, irfft + + Notes + ----- + `hfft`/`ihfft` are a pair analogous to `rfft`/`irfft`, but for the + opposite case: here the signal has Hermitian symmetry in the time + domain and is real in the frequency domain. So here it's `hfft` for + which you must supply the length of the result if it is to be odd: + + * even: ``ihfft(hfft(a, 2*len(a) - 2)) == a``, within roundoff error, + * odd: ``ihfft(hfft(a, 2*len(a) - 1)) == a``, within roundoff error. + + Examples + -------- + >>> spectrum = np.array([ 15, -4, 0, -1, 0, -4]) + >>> np.fft.ifft(spectrum) + array([1.+0.j, 2.+0.j, 3.+0.j, 4.+0.j, 3.+0.j, 2.+0.j]) # may vary + >>> np.fft.ihfft(spectrum) + array([ 1.-0.j, 2.-0.j, 3.-0.j, 4.-0.j]) # may vary + + """ + a = asarray(a) + if n is None: + n = a.shape[axis] + new_norm = _swap_direction(norm) + out = rfft(a, n, axis, norm=new_norm, out=out) + return conjugate(out, out=out) + + +def _cook_nd_args(a, s=None, axes=None, invreal=0): + if s is None: + shapeless = True + if axes is None: + s = list(a.shape) + else: + s = take(a.shape, axes) + else: + shapeless = False + s = list(s) + if axes is None: + if not shapeless: + msg = ("`axes` should not be `None` if `s` is not `None` " + "(Deprecated in NumPy 2.0). In a future version of NumPy, " + "this will raise an error and `s[i]` will correspond to " + "the size along the transformed axis specified by " + "`axes[i]`. To retain current behaviour, pass a sequence " + "[0, ..., k-1] to `axes` for an array of dimension k.") + warnings.warn(msg, DeprecationWarning, stacklevel=3) + axes = list(range(-len(s), 0)) + if len(s) != len(axes): + raise ValueError("Shape and axes have different lengths.") + if invreal and shapeless: + s[-1] = (a.shape[axes[-1]] - 1) * 2 + if None in s: + msg = ("Passing an array containing `None` values to `s` is " + "deprecated in NumPy 2.0 and will raise an error in " + "a future version of NumPy. To use the default behaviour " + "of the corresponding 1-D transform, pass the value matching " + "the default for its `n` parameter. To use the default " + "behaviour for every axis, the `s` argument can be omitted.") + warnings.warn(msg, DeprecationWarning, stacklevel=3) + # use the whole input array along axis `i` if `s[i] == -1` + s = [a.shape[_a] if _s == -1 else _s for _s, _a in zip(s, axes)] + return s, axes + + +def _raw_fftnd(a, s=None, axes=None, function=fft, norm=None, out=None): + a = asarray(a) + s, axes = _cook_nd_args(a, s, axes) + itl = list(range(len(axes))) + itl.reverse() + for ii in itl: + a = function(a, n=s[ii], axis=axes[ii], norm=norm, out=out) + return a + + +def _fftn_dispatcher(a, s=None, axes=None, norm=None, out=None): + return (a, out) + + +@array_function_dispatch(_fftn_dispatcher) +def fftn(a, s=None, axes=None, norm=None, out=None): + """ + Compute the N-dimensional discrete Fourier Transform. + + This function computes the *N*-dimensional discrete Fourier Transform over + any number of axes in an *M*-dimensional array by means of the Fast Fourier + Transform (FFT). + + Parameters + ---------- + a : array_like + Input array, can be complex. + s : sequence of ints, optional + Shape (length of each transformed axis) of the output + (``s[0]`` refers to axis 0, ``s[1]`` to axis 1, etc.). + This corresponds to ``n`` for ``fft(x, n)``. + Along any axis, if the given shape is smaller than that of the input, + the input is cropped. If it is larger, the input is padded with zeros. + + .. versionchanged:: 2.0 + + If it is ``-1``, the whole input is used (no padding/trimming). + + If `s` is not given, the shape of the input along the axes specified + by `axes` is used. + + .. deprecated:: 2.0 + + If `s` is not ``None``, `axes` must not be ``None`` either. + + .. deprecated:: 2.0 + + `s` must contain only ``int`` s, not ``None`` values. ``None`` + values currently mean that the default value for ``n`` is used + in the corresponding 1-D transform, but this behaviour is + deprecated. + + axes : sequence of ints, optional + Axes over which to compute the FFT. If not given, the last ``len(s)`` + axes are used, or all axes if `s` is also not specified. + Repeated indices in `axes` means that the transform over that axis is + performed multiple times. + + .. deprecated:: 2.0 + + If `s` is specified, the corresponding `axes` to be transformed + must be explicitly specified too. + + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype for all axes (and hence is + incompatible with passing in all but the trivial ``s``). + + .. versionadded:: 2.0.0 + + Returns + ------- + out : complex ndarray + The truncated or zero-padded input, transformed along the axes + indicated by `axes`, or by a combination of `s` and `a`, + as explained in the parameters section above. + + Raises + ------ + ValueError + If `s` and `axes` have different length. + IndexError + If an element of `axes` is larger than than the number of axes of `a`. + + See Also + -------- + numpy.fft : Overall view of discrete Fourier transforms, with definitions + and conventions used. + ifftn : The inverse of `fftn`, the inverse *n*-dimensional FFT. + fft : The one-dimensional FFT, with definitions and conventions used. + rfftn : The *n*-dimensional FFT of real input. + fft2 : The two-dimensional FFT. + fftshift : Shifts zero-frequency terms to centre of array + + Notes + ----- + The output, analogously to `fft`, contains the term for zero frequency in + the low-order corner of all axes, the positive frequency terms in the + first half of all axes, the term for the Nyquist frequency in the middle + of all axes and the negative frequency terms in the second half of all + axes, in order of decreasingly negative frequency. + + See `numpy.fft` for details, definitions and conventions used. + + Examples + -------- + >>> a = np.mgrid[:3, :3, :3][0] + >>> np.fft.fftn(a, axes=(1, 2)) + array([[[ 0.+0.j, 0.+0.j, 0.+0.j], # may vary + [ 0.+0.j, 0.+0.j, 0.+0.j], + [ 0.+0.j, 0.+0.j, 0.+0.j]], + [[ 9.+0.j, 0.+0.j, 0.+0.j], + [ 0.+0.j, 0.+0.j, 0.+0.j], + [ 0.+0.j, 0.+0.j, 0.+0.j]], + [[18.+0.j, 0.+0.j, 0.+0.j], + [ 0.+0.j, 0.+0.j, 0.+0.j], + [ 0.+0.j, 0.+0.j, 0.+0.j]]]) + >>> np.fft.fftn(a, (2, 2), axes=(0, 1)) + array([[[ 2.+0.j, 2.+0.j, 2.+0.j], # may vary + [ 0.+0.j, 0.+0.j, 0.+0.j]], + [[-2.+0.j, -2.+0.j, -2.+0.j], + [ 0.+0.j, 0.+0.j, 0.+0.j]]]) + + >>> import matplotlib.pyplot as plt + >>> [X, Y] = np.meshgrid(2 * np.pi * np.arange(200) / 12, + ... 2 * np.pi * np.arange(200) / 34) + >>> S = np.sin(X) + np.cos(Y) + np.random.uniform(0, 1, X.shape) + >>> FS = np.fft.fftn(S) + >>> plt.imshow(np.log(np.abs(np.fft.fftshift(FS))**2)) + + >>> plt.show() + + """ + return _raw_fftnd(a, s, axes, fft, norm, out=out) + + +@array_function_dispatch(_fftn_dispatcher) +def ifftn(a, s=None, axes=None, norm=None, out=None): + """ + Compute the N-dimensional inverse discrete Fourier Transform. + + This function computes the inverse of the N-dimensional discrete + Fourier Transform over any number of axes in an M-dimensional array by + means of the Fast Fourier Transform (FFT). In other words, + ``ifftn(fftn(a)) == a`` to within numerical accuracy. + For a description of the definitions and conventions used, see `numpy.fft`. + + The input, analogously to `ifft`, should be ordered in the same way as is + returned by `fftn`, i.e. it should have the term for zero frequency + in all axes in the low-order corner, the positive frequency terms in the + first half of all axes, the term for the Nyquist frequency in the middle + of all axes and the negative frequency terms in the second half of all + axes, in order of decreasingly negative frequency. + + Parameters + ---------- + a : array_like + Input array, can be complex. + s : sequence of ints, optional + Shape (length of each transformed axis) of the output + (``s[0]`` refers to axis 0, ``s[1]`` to axis 1, etc.). + This corresponds to ``n`` for ``ifft(x, n)``. + Along any axis, if the given shape is smaller than that of the input, + the input is cropped. If it is larger, the input is padded with zeros. + + .. versionchanged:: 2.0 + + If it is ``-1``, the whole input is used (no padding/trimming). + + If `s` is not given, the shape of the input along the axes specified + by `axes` is used. See notes for issue on `ifft` zero padding. + + .. deprecated:: 2.0 + + If `s` is not ``None``, `axes` must not be ``None`` either. + + .. deprecated:: 2.0 + + `s` must contain only ``int`` s, not ``None`` values. ``None`` + values currently mean that the default value for ``n`` is used + in the corresponding 1-D transform, but this behaviour is + deprecated. + + axes : sequence of ints, optional + Axes over which to compute the IFFT. If not given, the last ``len(s)`` + axes are used, or all axes if `s` is also not specified. + Repeated indices in `axes` means that the inverse transform over that + axis is performed multiple times. + + .. deprecated:: 2.0 + + If `s` is specified, the corresponding `axes` to be transformed + must be explicitly specified too. + + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype for all axes (and hence is + incompatible with passing in all but the trivial ``s``). + + .. versionadded:: 2.0.0 + + Returns + ------- + out : complex ndarray + The truncated or zero-padded input, transformed along the axes + indicated by `axes`, or by a combination of `s` or `a`, + as explained in the parameters section above. + + Raises + ------ + ValueError + If `s` and `axes` have different length. + IndexError + If an element of `axes` is larger than than the number of axes of `a`. + + See Also + -------- + numpy.fft : Overall view of discrete Fourier transforms, with definitions + and conventions used. + fftn : The forward *n*-dimensional FFT, of which `ifftn` is the inverse. + ifft : The one-dimensional inverse FFT. + ifft2 : The two-dimensional inverse FFT. + ifftshift : Undoes `fftshift`, shifts zero-frequency terms to beginning + of array. + + Notes + ----- + See `numpy.fft` for definitions and conventions used. + + Zero-padding, analogously with `ifft`, is performed by appending zeros to + the input along the specified dimension. Although this is the common + approach, it might lead to surprising results. If another form of zero + padding is desired, it must be performed before `ifftn` is called. + + Examples + -------- + >>> a = np.eye(4) + >>> np.fft.ifftn(np.fft.fftn(a, axes=(0,)), axes=(1,)) + array([[1.+0.j, 0.+0.j, 0.+0.j, 0.+0.j], # may vary + [0.+0.j, 1.+0.j, 0.+0.j, 0.+0.j], + [0.+0.j, 0.+0.j, 1.+0.j, 0.+0.j], + [0.+0.j, 0.+0.j, 0.+0.j, 1.+0.j]]) + + + Create and plot an image with band-limited frequency content: + + >>> import matplotlib.pyplot as plt + >>> n = np.zeros((200,200), dtype=complex) + >>> n[60:80, 20:40] = np.exp(1j*np.random.uniform(0, 2*np.pi, (20, 20))) + >>> im = np.fft.ifftn(n).real + >>> plt.imshow(im) + + >>> plt.show() + + """ + return _raw_fftnd(a, s, axes, ifft, norm, out=out) + + +@array_function_dispatch(_fftn_dispatcher) +def fft2(a, s=None, axes=(-2, -1), norm=None, out=None): + """ + Compute the 2-dimensional discrete Fourier Transform. + + This function computes the *n*-dimensional discrete Fourier Transform + over any axes in an *M*-dimensional array by means of the + Fast Fourier Transform (FFT). By default, the transform is computed over + the last two axes of the input array, i.e., a 2-dimensional FFT. + + Parameters + ---------- + a : array_like + Input array, can be complex + s : sequence of ints, optional + Shape (length of each transformed axis) of the output + (``s[0]`` refers to axis 0, ``s[1]`` to axis 1, etc.). + This corresponds to ``n`` for ``fft(x, n)``. + Along each axis, if the given shape is smaller than that of the input, + the input is cropped. If it is larger, the input is padded with zeros. + + .. versionchanged:: 2.0 + + If it is ``-1``, the whole input is used (no padding/trimming). + + If `s` is not given, the shape of the input along the axes specified + by `axes` is used. + + .. deprecated:: 2.0 + + If `s` is not ``None``, `axes` must not be ``None`` either. + + .. deprecated:: 2.0 + + `s` must contain only ``int`` s, not ``None`` values. ``None`` + values currently mean that the default value for ``n`` is used + in the corresponding 1-D transform, but this behaviour is + deprecated. + + axes : sequence of ints, optional + Axes over which to compute the FFT. If not given, the last two + axes are used. A repeated index in `axes` means the transform over + that axis is performed multiple times. A one-element sequence means + that a one-dimensional FFT is performed. Default: ``(-2, -1)``. + + .. deprecated:: 2.0 + + If `s` is specified, the corresponding `axes` to be transformed + must not be ``None``. + + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype for all axes (and hence only the + last axis can have ``s`` not equal to the shape at that axis). + + .. versionadded:: 2.0.0 + + Returns + ------- + out : complex ndarray + The truncated or zero-padded input, transformed along the axes + indicated by `axes`, or the last two axes if `axes` is not given. + + Raises + ------ + ValueError + If `s` and `axes` have different length, or `axes` not given and + ``len(s) != 2``. + IndexError + If an element of `axes` is larger than than the number of axes of `a`. + + See Also + -------- + numpy.fft : Overall view of discrete Fourier transforms, with definitions + and conventions used. + ifft2 : The inverse two-dimensional FFT. + fft : The one-dimensional FFT. + fftn : The *n*-dimensional FFT. + fftshift : Shifts zero-frequency terms to the center of the array. + For two-dimensional input, swaps first and third quadrants, and second + and fourth quadrants. + + Notes + ----- + `fft2` is just `fftn` with a different default for `axes`. + + The output, analogously to `fft`, contains the term for zero frequency in + the low-order corner of the transformed axes, the positive frequency terms + in the first half of these axes, the term for the Nyquist frequency in the + middle of the axes and the negative frequency terms in the second half of + the axes, in order of decreasingly negative frequency. + + See `fftn` for details and a plotting example, and `numpy.fft` for + definitions and conventions used. + + + Examples + -------- + >>> a = np.mgrid[:5, :5][0] + >>> np.fft.fft2(a) + array([[ 50. +0.j , 0. +0.j , 0. +0.j , # may vary + 0. +0.j , 0. +0.j ], + [-12.5+17.20477401j, 0. +0.j , 0. +0.j , + 0. +0.j , 0. +0.j ], + [-12.5 +4.0614962j , 0. +0.j , 0. +0.j , + 0. +0.j , 0. +0.j ], + [-12.5 -4.0614962j , 0. +0.j , 0. +0.j , + 0. +0.j , 0. +0.j ], + [-12.5-17.20477401j, 0. +0.j , 0. +0.j , + 0. +0.j , 0. +0.j ]]) + + """ + return _raw_fftnd(a, s, axes, fft, norm, out=out) + + +@array_function_dispatch(_fftn_dispatcher) +def ifft2(a, s=None, axes=(-2, -1), norm=None, out=None): + """ + Compute the 2-dimensional inverse discrete Fourier Transform. + + This function computes the inverse of the 2-dimensional discrete Fourier + Transform over any number of axes in an M-dimensional array by means of + the Fast Fourier Transform (FFT). In other words, ``ifft2(fft2(a)) == a`` + to within numerical accuracy. By default, the inverse transform is + computed over the last two axes of the input array. + + The input, analogously to `ifft`, should be ordered in the same way as is + returned by `fft2`, i.e. it should have the term for zero frequency + in the low-order corner of the two axes, the positive frequency terms in + the first half of these axes, the term for the Nyquist frequency in the + middle of the axes and the negative frequency terms in the second half of + both axes, in order of decreasingly negative frequency. + + Parameters + ---------- + a : array_like + Input array, can be complex. + s : sequence of ints, optional + Shape (length of each axis) of the output (``s[0]`` refers to axis 0, + ``s[1]`` to axis 1, etc.). This corresponds to `n` for ``ifft(x, n)``. + Along each axis, if the given shape is smaller than that of the input, + the input is cropped. If it is larger, the input is padded with zeros. + + .. versionchanged:: 2.0 + + If it is ``-1``, the whole input is used (no padding/trimming). + + If `s` is not given, the shape of the input along the axes specified + by `axes` is used. See notes for issue on `ifft` zero padding. + + .. deprecated:: 2.0 + + If `s` is not ``None``, `axes` must not be ``None`` either. + + .. deprecated:: 2.0 + + `s` must contain only ``int`` s, not ``None`` values. ``None`` + values currently mean that the default value for ``n`` is used + in the corresponding 1-D transform, but this behaviour is + deprecated. + + axes : sequence of ints, optional + Axes over which to compute the FFT. If not given, the last two + axes are used. A repeated index in `axes` means the transform over + that axis is performed multiple times. A one-element sequence means + that a one-dimensional FFT is performed. Default: ``(-2, -1)``. + + .. deprecated:: 2.0 + + If `s` is specified, the corresponding `axes` to be transformed + must not be ``None``. + + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype for all axes (and hence is + incompatible with passing in all but the trivial ``s``). + + .. versionadded:: 2.0.0 + + Returns + ------- + out : complex ndarray + The truncated or zero-padded input, transformed along the axes + indicated by `axes`, or the last two axes if `axes` is not given. + + Raises + ------ + ValueError + If `s` and `axes` have different length, or `axes` not given and + ``len(s) != 2``. + IndexError + If an element of `axes` is larger than than the number of axes of `a`. + + See Also + -------- + numpy.fft : Overall view of discrete Fourier transforms, with definitions + and conventions used. + fft2 : The forward 2-dimensional FFT, of which `ifft2` is the inverse. + ifftn : The inverse of the *n*-dimensional FFT. + fft : The one-dimensional FFT. + ifft : The one-dimensional inverse FFT. + + Notes + ----- + `ifft2` is just `ifftn` with a different default for `axes`. + + See `ifftn` for details and a plotting example, and `numpy.fft` for + definition and conventions used. + + Zero-padding, analogously with `ifft`, is performed by appending zeros to + the input along the specified dimension. Although this is the common + approach, it might lead to surprising results. If another form of zero + padding is desired, it must be performed before `ifft2` is called. + + Examples + -------- + >>> a = 4 * np.eye(4) + >>> np.fft.ifft2(a) + array([[1.+0.j, 0.+0.j, 0.+0.j, 0.+0.j], # may vary + [0.+0.j, 0.+0.j, 0.+0.j, 1.+0.j], + [0.+0.j, 0.+0.j, 1.+0.j, 0.+0.j], + [0.+0.j, 1.+0.j, 0.+0.j, 0.+0.j]]) + + """ + return _raw_fftnd(a, s, axes, ifft, norm, out=None) + + +@array_function_dispatch(_fftn_dispatcher) +def rfftn(a, s=None, axes=None, norm=None, out=None): + """ + Compute the N-dimensional discrete Fourier Transform for real input. + + This function computes the N-dimensional discrete Fourier Transform over + any number of axes in an M-dimensional real array by means of the Fast + Fourier Transform (FFT). By default, all axes are transformed, with the + real transform performed over the last axis, while the remaining + transforms are complex. + + Parameters + ---------- + a : array_like + Input array, taken to be real. + s : sequence of ints, optional + Shape (length along each transformed axis) to use from the input. + (``s[0]`` refers to axis 0, ``s[1]`` to axis 1, etc.). + The final element of `s` corresponds to `n` for ``rfft(x, n)``, while + for the remaining axes, it corresponds to `n` for ``fft(x, n)``. + Along any axis, if the given shape is smaller than that of the input, + the input is cropped. If it is larger, the input is padded with zeros. + + .. versionchanged:: 2.0 + + If it is ``-1``, the whole input is used (no padding/trimming). + + If `s` is not given, the shape of the input along the axes specified + by `axes` is used. + + .. deprecated:: 2.0 + + If `s` is not ``None``, `axes` must not be ``None`` either. + + .. deprecated:: 2.0 + + `s` must contain only ``int`` s, not ``None`` values. ``None`` + values currently mean that the default value for ``n`` is used + in the corresponding 1-D transform, but this behaviour is + deprecated. + + axes : sequence of ints, optional + Axes over which to compute the FFT. If not given, the last ``len(s)`` + axes are used, or all axes if `s` is also not specified. + + .. deprecated:: 2.0 + + If `s` is specified, the corresponding `axes` to be transformed + must be explicitly specified too. + + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype for all axes (and hence is + incompatible with passing in all but the trivial ``s``). + + .. versionadded:: 2.0.0 + + Returns + ------- + out : complex ndarray + The truncated or zero-padded input, transformed along the axes + indicated by `axes`, or by a combination of `s` and `a`, + as explained in the parameters section above. + The length of the last axis transformed will be ``s[-1]//2+1``, + while the remaining transformed axes will have lengths according to + `s`, or unchanged from the input. + + Raises + ------ + ValueError + If `s` and `axes` have different length. + IndexError + If an element of `axes` is larger than than the number of axes of `a`. + + See Also + -------- + irfftn : The inverse of `rfftn`, i.e. the inverse of the n-dimensional FFT + of real input. + fft : The one-dimensional FFT, with definitions and conventions used. + rfft : The one-dimensional FFT of real input. + fftn : The n-dimensional FFT. + rfft2 : The two-dimensional FFT of real input. + + Notes + ----- + The transform for real input is performed over the last transformation + axis, as by `rfft`, then the transform over the remaining axes is + performed as by `fftn`. The order of the output is as for `rfft` for the + final transformation axis, and as for `fftn` for the remaining + transformation axes. + + See `fft` for details, definitions and conventions used. + + Examples + -------- + >>> a = np.ones((2, 2, 2)) + >>> np.fft.rfftn(a) + array([[[8.+0.j, 0.+0.j], # may vary + [0.+0.j, 0.+0.j]], + [[0.+0.j, 0.+0.j], + [0.+0.j, 0.+0.j]]]) + + >>> np.fft.rfftn(a, axes=(2, 0)) + array([[[4.+0.j, 0.+0.j], # may vary + [4.+0.j, 0.+0.j]], + [[0.+0.j, 0.+0.j], + [0.+0.j, 0.+0.j]]]) + + """ + a = asarray(a) + s, axes = _cook_nd_args(a, s, axes) + a = rfft(a, s[-1], axes[-1], norm, out=out) + for ii in range(len(axes)-1): + a = fft(a, s[ii], axes[ii], norm, out=out) + return a + + +@array_function_dispatch(_fftn_dispatcher) +def rfft2(a, s=None, axes=(-2, -1), norm=None, out=None): + """ + Compute the 2-dimensional FFT of a real array. + + Parameters + ---------- + a : array + Input array, taken to be real. + s : sequence of ints, optional + Shape of the FFT. + + .. versionchanged:: 2.0 + + If it is ``-1``, the whole input is used (no padding/trimming). + + .. deprecated:: 2.0 + + If `s` is not ``None``, `axes` must not be ``None`` either. + + .. deprecated:: 2.0 + + `s` must contain only ``int`` s, not ``None`` values. ``None`` + values currently mean that the default value for ``n`` is used + in the corresponding 1-D transform, but this behaviour is + deprecated. + + axes : sequence of ints, optional + Axes over which to compute the FFT. Default: ``(-2, -1)``. + + .. deprecated:: 2.0 + + If `s` is specified, the corresponding `axes` to be transformed + must not be ``None``. + + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : complex ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype for the last inverse transform. + incompatible with passing in all but the trivial ``s``). + + .. versionadded:: 2.0.0 + + Returns + ------- + out : ndarray + The result of the real 2-D FFT. + + See Also + -------- + rfftn : Compute the N-dimensional discrete Fourier Transform for real + input. + + Notes + ----- + This is really just `rfftn` with different default behavior. + For more details see `rfftn`. + + Examples + -------- + >>> a = np.mgrid[:5, :5][0] + >>> np.fft.rfft2(a) + array([[ 50. +0.j , 0. +0.j , 0. +0.j ], + [-12.5+17.20477401j, 0. +0.j , 0. +0.j ], + [-12.5 +4.0614962j , 0. +0.j , 0. +0.j ], + [-12.5 -4.0614962j , 0. +0.j , 0. +0.j ], + [-12.5-17.20477401j, 0. +0.j , 0. +0.j ]]) + """ + return rfftn(a, s, axes, norm, out=out) + + +@array_function_dispatch(_fftn_dispatcher) +def irfftn(a, s=None, axes=None, norm=None, out=None): + """ + Computes the inverse of `rfftn`. + + This function computes the inverse of the N-dimensional discrete + Fourier Transform for real input over any number of axes in an + M-dimensional array by means of the Fast Fourier Transform (FFT). In + other words, ``irfftn(rfftn(a), a.shape) == a`` to within numerical + accuracy. (The ``a.shape`` is necessary like ``len(a)`` is for `irfft`, + and for the same reason.) + + The input should be ordered in the same way as is returned by `rfftn`, + i.e. as for `irfft` for the final transformation axis, and as for `ifftn` + along all the other axes. + + Parameters + ---------- + a : array_like + Input array. + s : sequence of ints, optional + Shape (length of each transformed axis) of the output + (``s[0]`` refers to axis 0, ``s[1]`` to axis 1, etc.). `s` is also the + number of input points used along this axis, except for the last axis, + where ``s[-1]//2+1`` points of the input are used. + Along any axis, if the shape indicated by `s` is smaller than that of + the input, the input is cropped. If it is larger, the input is padded + with zeros. + + .. versionchanged:: 2.0 + + If it is ``-1``, the whole input is used (no padding/trimming). + + If `s` is not given, the shape of the input along the axes + specified by axes is used. Except for the last axis which is taken to + be ``2*(m-1)`` where ``m`` is the length of the input along that axis. + + .. deprecated:: 2.0 + + If `s` is not ``None``, `axes` must not be ``None`` either. + + .. deprecated:: 2.0 + + `s` must contain only ``int`` s, not ``None`` values. ``None`` + values currently mean that the default value for ``n`` is used + in the corresponding 1-D transform, but this behaviour is + deprecated. + + axes : sequence of ints, optional + Axes over which to compute the inverse FFT. If not given, the last + `len(s)` axes are used, or all axes if `s` is also not specified. + Repeated indices in `axes` means that the inverse transform over that + axis is performed multiple times. + + .. deprecated:: 2.0 + + If `s` is specified, the corresponding `axes` to be transformed + must be explicitly specified too. + + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype for the last transformation. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : ndarray + The truncated or zero-padded input, transformed along the axes + indicated by `axes`, or by a combination of `s` or `a`, + as explained in the parameters section above. + The length of each transformed axis is as given by the corresponding + element of `s`, or the length of the input in every axis except for the + last one if `s` is not given. In the final transformed axis the length + of the output when `s` is not given is ``2*(m-1)`` where ``m`` is the + length of the final transformed axis of the input. To get an odd + number of output points in the final axis, `s` must be specified. + + Raises + ------ + ValueError + If `s` and `axes` have different length. + IndexError + If an element of `axes` is larger than than the number of axes of `a`. + + See Also + -------- + rfftn : The forward n-dimensional FFT of real input, + of which `ifftn` is the inverse. + fft : The one-dimensional FFT, with definitions and conventions used. + irfft : The inverse of the one-dimensional FFT of real input. + irfft2 : The inverse of the two-dimensional FFT of real input. + + Notes + ----- + See `fft` for definitions and conventions used. + + See `rfft` for definitions and conventions used for real input. + + The correct interpretation of the hermitian input depends on the shape of + the original data, as given by `s`. This is because each input shape could + correspond to either an odd or even length signal. By default, `irfftn` + assumes an even output length which puts the last entry at the Nyquist + frequency; aliasing with its symmetric counterpart. When performing the + final complex to real transform, the last value is thus treated as purely + real. To avoid losing information, the correct shape of the real input + **must** be given. + + Examples + -------- + >>> a = np.zeros((3, 2, 2)) + >>> a[0, 0, 0] = 3 * 2 * 2 + >>> np.fft.irfftn(a) + array([[[1., 1.], + [1., 1.]], + [[1., 1.], + [1., 1.]], + [[1., 1.], + [1., 1.]]]) + + """ + a = asarray(a) + s, axes = _cook_nd_args(a, s, axes, invreal=1) + for ii in range(len(axes)-1): + a = ifft(a, s[ii], axes[ii], norm) + a = irfft(a, s[-1], axes[-1], norm, out=out) + return a + + +@array_function_dispatch(_fftn_dispatcher) +def irfft2(a, s=None, axes=(-2, -1), norm=None, out=None): + """ + Computes the inverse of `rfft2`. + + Parameters + ---------- + a : array_like + The input array + s : sequence of ints, optional + Shape of the real output to the inverse FFT. + + .. versionchanged:: 2.0 + + If it is ``-1``, the whole input is used (no padding/trimming). + + .. deprecated:: 2.0 + + If `s` is not ``None``, `axes` must not be ``None`` either. + + .. deprecated:: 2.0 + + `s` must contain only ``int`` s, not ``None`` values. ``None`` + values currently mean that the default value for ``n`` is used + in the corresponding 1-D transform, but this behaviour is + deprecated. + + axes : sequence of ints, optional + The axes over which to compute the inverse fft. + Default: ``(-2, -1)``, the last two axes. + + .. deprecated:: 2.0 + + If `s` is specified, the corresponding `axes` to be transformed + must not be ``None``. + + norm : {"backward", "ortho", "forward"}, optional + .. versionadded:: 1.10.0 + + Normalization mode (see `numpy.fft`). Default is "backward". + Indicates which direction of the forward/backward pair of transforms + is scaled and with what normalization factor. + + .. versionadded:: 1.20.0 + + The "backward", "forward" values were added. + + out : ndarray, optional + If provided, the result will be placed in this array. It should be + of the appropriate shape and dtype for the last transformation. + + .. versionadded:: 2.0.0 + + Returns + ------- + out : ndarray + The result of the inverse real 2-D FFT. + + See Also + -------- + rfft2 : The forward two-dimensional FFT of real input, + of which `irfft2` is the inverse. + rfft : The one-dimensional FFT for real input. + irfft : The inverse of the one-dimensional FFT of real input. + irfftn : Compute the inverse of the N-dimensional FFT of real input. + + Notes + ----- + This is really `irfftn` with different defaults. + For more details see `irfftn`. + + Examples + -------- + >>> a = np.mgrid[:5, :5][0] + >>> A = np.fft.rfft2(a) + >>> np.fft.irfft2(A, s=a.shape) + array([[0., 0., 0., 0., 0.], + [1., 1., 1., 1., 1.], + [2., 2., 2., 2., 2.], + [3., 3., 3., 3., 3.], + [4., 4., 4., 4., 4.]]) + """ + return irfftn(a, s, axes, norm, out=None) diff --git a/venv/lib/python3.12/site-packages/numpy/fft/_pocketfft.pyi b/venv/lib/python3.12/site-packages/numpy/fft/_pocketfft.pyi new file mode 100644 index 0000000000000000000000000000000000000000..7f088572efe815e7a0d46200a2cf3be5b3838b7e --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/_pocketfft.pyi @@ -0,0 +1,122 @@ +from collections.abc import Sequence +from typing import Literal as L + +from numpy import complex128, float64 +from numpy._typing import ArrayLike, NDArray, _ArrayLikeNumber_co + +_NormKind = L[None, "backward", "ortho", "forward"] + +__all__: list[str] + +def fft( + a: ArrayLike, + n: None | int = ..., + axis: int = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def ifft( + a: ArrayLike, + n: None | int = ..., + axis: int = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def rfft( + a: ArrayLike, + n: None | int = ..., + axis: int = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def irfft( + a: ArrayLike, + n: None | int = ..., + axis: int = ..., + norm: _NormKind = ..., + out: None | NDArray[float64] = ..., +) -> NDArray[float64]: ... + +# Input array must be compatible with `np.conjugate` +def hfft( + a: _ArrayLikeNumber_co, + n: None | int = ..., + axis: int = ..., + norm: _NormKind = ..., + out: None | NDArray[float64] = ..., +) -> NDArray[float64]: ... + +def ihfft( + a: ArrayLike, + n: None | int = ..., + axis: int = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def fftn( + a: ArrayLike, + s: None | Sequence[int] = ..., + axes: None | Sequence[int] = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def ifftn( + a: ArrayLike, + s: None | Sequence[int] = ..., + axes: None | Sequence[int] = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def rfftn( + a: ArrayLike, + s: None | Sequence[int] = ..., + axes: None | Sequence[int] = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def irfftn( + a: ArrayLike, + s: None | Sequence[int] = ..., + axes: None | Sequence[int] = ..., + norm: _NormKind = ..., + out: None | NDArray[float64] = ..., +) -> NDArray[float64]: ... + +def fft2( + a: ArrayLike, + s: None | Sequence[int] = ..., + axes: None | Sequence[int] = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def ifft2( + a: ArrayLike, + s: None | Sequence[int] = ..., + axes: None | Sequence[int] = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def rfft2( + a: ArrayLike, + s: None | Sequence[int] = ..., + axes: None | Sequence[int] = ..., + norm: _NormKind = ..., + out: None | NDArray[complex128] = ..., +) -> NDArray[complex128]: ... + +def irfft2( + a: ArrayLike, + s: None | Sequence[int] = ..., + axes: None | Sequence[int] = ..., + norm: _NormKind = ..., + out: None | NDArray[float64] = ..., +) -> NDArray[float64]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/fft/_pocketfft_umath.cpython-312-x86_64-linux-gnu.so b/venv/lib/python3.12/site-packages/numpy/fft/_pocketfft_umath.cpython-312-x86_64-linux-gnu.so new file mode 100644 index 0000000000000000000000000000000000000000..bd033f7e807418bd974ec9a7ec853e52edf35c59 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/_pocketfft_umath.cpython-312-x86_64-linux-gnu.so @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:764c682972a9ed843306e3596a354bdce2cba236365e01908c0ccc867d25b7e5 +size 649400 diff --git a/venv/lib/python3.12/site-packages/numpy/fft/helper.py b/venv/lib/python3.12/site-packages/numpy/fft/helper.py new file mode 100644 index 0000000000000000000000000000000000000000..4375cedf7fcfd43794b205b24f413281f6fa7197 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/helper.py @@ -0,0 +1,16 @@ +def __getattr__(attr_name): + import warnings + from numpy.fft import _helper + ret = getattr(_helper, attr_name, None) + if ret is None: + raise AttributeError( + f"module 'numpy.fft.helper' has no attribute {attr_name}") + warnings.warn( + "The numpy.fft.helper has been made private and renamed to " + "numpy.fft._helper. All four functions exported by it (i.e. fftshift, " + "ifftshift, fftfreq, rfftfreq) are available from numpy.fft. " + f"Please use numpy.fft.{attr_name} instead.", + DeprecationWarning, + stacklevel=3 + ) + return ret diff --git a/venv/lib/python3.12/site-packages/numpy/fft/tests/__init__.py b/venv/lib/python3.12/site-packages/numpy/fft/tests/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391 diff --git a/venv/lib/python3.12/site-packages/numpy/fft/tests/__pycache__/__init__.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/fft/tests/__pycache__/__init__.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..40acc197baffcecd8cccd4c5f6b49bd88943013a Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/fft/tests/__pycache__/__init__.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/fft/tests/__pycache__/test_helper.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/fft/tests/__pycache__/test_helper.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..4fb8ecdd73c319faafaa5cc448293b6bc1dc8b97 Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/fft/tests/__pycache__/test_helper.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/fft/tests/__pycache__/test_pocketfft.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/fft/tests/__pycache__/test_pocketfft.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..4a93156511e98c829365cde8a9f68c087ba34a9d Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/fft/tests/__pycache__/test_pocketfft.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/fft/tests/test_helper.py b/venv/lib/python3.12/site-packages/numpy/fft/tests/test_helper.py new file mode 100644 index 0000000000000000000000000000000000000000..852e6625fff2370380979fd22a8575f692c206aa --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/tests/test_helper.py @@ -0,0 +1,167 @@ +"""Test functions for fftpack.helper module + +Copied from fftpack.helper by Pearu Peterson, October 2005 + +""" +import numpy as np +from numpy.testing import assert_array_almost_equal +from numpy import fft, pi + + +class TestFFTShift: + + def test_definition(self): + x = [0, 1, 2, 3, 4, -4, -3, -2, -1] + y = [-4, -3, -2, -1, 0, 1, 2, 3, 4] + assert_array_almost_equal(fft.fftshift(x), y) + assert_array_almost_equal(fft.ifftshift(y), x) + x = [0, 1, 2, 3, 4, -5, -4, -3, -2, -1] + y = [-5, -4, -3, -2, -1, 0, 1, 2, 3, 4] + assert_array_almost_equal(fft.fftshift(x), y) + assert_array_almost_equal(fft.ifftshift(y), x) + + def test_inverse(self): + for n in [1, 4, 9, 100, 211]: + x = np.random.random((n,)) + assert_array_almost_equal(fft.ifftshift(fft.fftshift(x)), x) + + def test_axes_keyword(self): + freqs = [[0, 1, 2], [3, 4, -4], [-3, -2, -1]] + shifted = [[-1, -3, -2], [2, 0, 1], [-4, 3, 4]] + assert_array_almost_equal(fft.fftshift(freqs, axes=(0, 1)), shifted) + assert_array_almost_equal(fft.fftshift(freqs, axes=0), + fft.fftshift(freqs, axes=(0,))) + assert_array_almost_equal(fft.ifftshift(shifted, axes=(0, 1)), freqs) + assert_array_almost_equal(fft.ifftshift(shifted, axes=0), + fft.ifftshift(shifted, axes=(0,))) + + assert_array_almost_equal(fft.fftshift(freqs), shifted) + assert_array_almost_equal(fft.ifftshift(shifted), freqs) + + def test_uneven_dims(self): + """ Test 2D input, which has uneven dimension sizes """ + freqs = [ + [0, 1], + [2, 3], + [4, 5] + ] + + # shift in dimension 0 + shift_dim0 = [ + [4, 5], + [0, 1], + [2, 3] + ] + assert_array_almost_equal(fft.fftshift(freqs, axes=0), shift_dim0) + assert_array_almost_equal(fft.ifftshift(shift_dim0, axes=0), freqs) + assert_array_almost_equal(fft.fftshift(freqs, axes=(0,)), shift_dim0) + assert_array_almost_equal(fft.ifftshift(shift_dim0, axes=[0]), freqs) + + # shift in dimension 1 + shift_dim1 = [ + [1, 0], + [3, 2], + [5, 4] + ] + assert_array_almost_equal(fft.fftshift(freqs, axes=1), shift_dim1) + assert_array_almost_equal(fft.ifftshift(shift_dim1, axes=1), freqs) + + # shift in both dimensions + shift_dim_both = [ + [5, 4], + [1, 0], + [3, 2] + ] + assert_array_almost_equal(fft.fftshift(freqs, axes=(0, 1)), shift_dim_both) + assert_array_almost_equal(fft.ifftshift(shift_dim_both, axes=(0, 1)), freqs) + assert_array_almost_equal(fft.fftshift(freqs, axes=[0, 1]), shift_dim_both) + assert_array_almost_equal(fft.ifftshift(shift_dim_both, axes=[0, 1]), freqs) + + # axes=None (default) shift in all dimensions + assert_array_almost_equal(fft.fftshift(freqs, axes=None), shift_dim_both) + assert_array_almost_equal(fft.ifftshift(shift_dim_both, axes=None), freqs) + assert_array_almost_equal(fft.fftshift(freqs), shift_dim_both) + assert_array_almost_equal(fft.ifftshift(shift_dim_both), freqs) + + def test_equal_to_original(self): + """ Test that the new (>=v1.15) implementation (see #10073) is equal to the original (<=v1.14) """ + from numpy._core import asarray, concatenate, arange, take + + def original_fftshift(x, axes=None): + """ How fftshift was implemented in v1.14""" + tmp = asarray(x) + ndim = tmp.ndim + if axes is None: + axes = list(range(ndim)) + elif isinstance(axes, int): + axes = (axes,) + y = tmp + for k in axes: + n = tmp.shape[k] + p2 = (n + 1) // 2 + mylist = concatenate((arange(p2, n), arange(p2))) + y = take(y, mylist, k) + return y + + def original_ifftshift(x, axes=None): + """ How ifftshift was implemented in v1.14 """ + tmp = asarray(x) + ndim = tmp.ndim + if axes is None: + axes = list(range(ndim)) + elif isinstance(axes, int): + axes = (axes,) + y = tmp + for k in axes: + n = tmp.shape[k] + p2 = n - (n + 1) // 2 + mylist = concatenate((arange(p2, n), arange(p2))) + y = take(y, mylist, k) + return y + + # create possible 2d array combinations and try all possible keywords + # compare output to original functions + for i in range(16): + for j in range(16): + for axes_keyword in [0, 1, None, (0,), (0, 1)]: + inp = np.random.rand(i, j) + + assert_array_almost_equal(fft.fftshift(inp, axes_keyword), + original_fftshift(inp, axes_keyword)) + + assert_array_almost_equal(fft.ifftshift(inp, axes_keyword), + original_ifftshift(inp, axes_keyword)) + + +class TestFFTFreq: + + def test_definition(self): + x = [0, 1, 2, 3, 4, -4, -3, -2, -1] + assert_array_almost_equal(9*fft.fftfreq(9), x) + assert_array_almost_equal(9*pi*fft.fftfreq(9, pi), x) + x = [0, 1, 2, 3, 4, -5, -4, -3, -2, -1] + assert_array_almost_equal(10*fft.fftfreq(10), x) + assert_array_almost_equal(10*pi*fft.fftfreq(10, pi), x) + + +class TestRFFTFreq: + + def test_definition(self): + x = [0, 1, 2, 3, 4] + assert_array_almost_equal(9*fft.rfftfreq(9), x) + assert_array_almost_equal(9*pi*fft.rfftfreq(9, pi), x) + x = [0, 1, 2, 3, 4, 5] + assert_array_almost_equal(10*fft.rfftfreq(10), x) + assert_array_almost_equal(10*pi*fft.rfftfreq(10, pi), x) + + +class TestIRFFTN: + + def test_not_last_axis_success(self): + ar, ai = np.random.random((2, 16, 8, 32)) + a = ar + 1j*ai + + axes = (-2,) + + # Should not raise error + fft.irfftn(a, axes=axes) diff --git a/venv/lib/python3.12/site-packages/numpy/fft/tests/test_pocketfft.py b/venv/lib/python3.12/site-packages/numpy/fft/tests/test_pocketfft.py new file mode 100644 index 0000000000000000000000000000000000000000..d1e4da2eb831e9ad12f847676c8c417f07e00308 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/fft/tests/test_pocketfft.py @@ -0,0 +1,581 @@ +import numpy as np +import pytest +from numpy.random import random +from numpy.testing import ( + assert_array_equal, assert_raises, assert_allclose, IS_WASM + ) +import threading +import queue + + +def fft1(x): + L = len(x) + phase = -2j * np.pi * (np.arange(L) / L) + phase = np.arange(L).reshape(-1, 1) * phase + return np.sum(x*np.exp(phase), axis=1) + + +class TestFFTShift: + + def test_fft_n(self): + assert_raises(ValueError, np.fft.fft, [1, 2, 3], 0) + + +class TestFFT1D: + + def test_identity(self): + maxlen = 512 + x = random(maxlen) + 1j*random(maxlen) + xr = random(maxlen) + for i in range(1, maxlen): + assert_allclose(np.fft.ifft(np.fft.fft(x[0:i])), x[0:i], + atol=1e-12) + assert_allclose(np.fft.irfft(np.fft.rfft(xr[0:i]), i), + xr[0:i], atol=1e-12) + + @pytest.mark.parametrize("dtype", [np.single, np.double, np.longdouble]) + def test_identity_long_short(self, dtype): + # Test with explicitly given number of points, both for n + # smaller and for n larger than the input size. + maxlen = 16 + atol = 5 * np.spacing(np.array(1., dtype=dtype)) + x = random(maxlen).astype(dtype) + 1j*random(maxlen).astype(dtype) + xx = np.concatenate([x, np.zeros_like(x)]) + xr = random(maxlen).astype(dtype) + xxr = np.concatenate([xr, np.zeros_like(xr)]) + for i in range(1, maxlen*2): + check_c = np.fft.ifft(np.fft.fft(x, n=i), n=i) + assert check_c.real.dtype == dtype + assert_allclose(check_c, xx[0:i], atol=atol, rtol=0) + check_r = np.fft.irfft(np.fft.rfft(xr, n=i), n=i) + assert check_r.dtype == dtype + assert_allclose(check_r, xxr[0:i], atol=atol, rtol=0) + + @pytest.mark.parametrize("dtype", [np.single, np.double, np.longdouble]) + def test_identity_long_short_reversed(self, dtype): + # Also test explicitly given number of points in reversed order. + maxlen = 16 + atol = 5 * np.spacing(np.array(1., dtype=dtype)) + x = random(maxlen).astype(dtype) + 1j*random(maxlen).astype(dtype) + xx = np.concatenate([x, np.zeros_like(x)]) + for i in range(1, maxlen*2): + check_via_c = np.fft.fft(np.fft.ifft(x, n=i), n=i) + assert check_via_c.dtype == x.dtype + assert_allclose(check_via_c, xx[0:i], atol=atol, rtol=0) + # For irfft, we can neither recover the imaginary part of + # the first element, nor the imaginary part of the last + # element if npts is even. So, set to 0 for the comparison. + y = x.copy() + n = i // 2 + 1 + y.imag[0] = 0 + if i % 2 == 0: + y.imag[n-1:] = 0 + yy = np.concatenate([y, np.zeros_like(y)]) + check_via_r = np.fft.rfft(np.fft.irfft(x, n=i), n=i) + assert check_via_r.dtype == x.dtype + assert_allclose(check_via_r, yy[0:n], atol=atol, rtol=0) + + def test_fft(self): + x = random(30) + 1j*random(30) + assert_allclose(fft1(x), np.fft.fft(x), atol=1e-6) + assert_allclose(fft1(x), np.fft.fft(x, norm="backward"), atol=1e-6) + assert_allclose(fft1(x) / np.sqrt(30), + np.fft.fft(x, norm="ortho"), atol=1e-6) + assert_allclose(fft1(x) / 30., + np.fft.fft(x, norm="forward"), atol=1e-6) + + @pytest.mark.parametrize("axis", (0, 1)) + @pytest.mark.parametrize("dtype", (complex, float)) + @pytest.mark.parametrize("transpose", (True, False)) + def test_fft_out_argument(self, dtype, transpose, axis): + def zeros_like(x): + if transpose: + return np.zeros_like(x.T).T + else: + return np.zeros_like(x) + + # tests below only test the out parameter + if dtype is complex: + y = random((10, 20)) + 1j*random((10, 20)) + fft, ifft = np.fft.fft, np.fft.ifft + else: + y = random((10, 20)) + fft, ifft = np.fft.rfft, np.fft.irfft + + expected = fft(y, axis=axis) + out = zeros_like(expected) + result = fft(y, out=out, axis=axis) + assert result is out + assert_array_equal(result, expected) + + expected2 = ifft(expected, axis=axis) + out2 = out if dtype is complex else zeros_like(expected2) + result2 = ifft(out, out=out2, axis=axis) + assert result2 is out2 + assert_array_equal(result2, expected2) + + @pytest.mark.parametrize("axis", [0, 1]) + def test_fft_inplace_out(self, axis): + # Test some weirder in-place combinations + y = random((20, 20)) + 1j*random((20, 20)) + # Fully in-place. + y1 = y.copy() + expected1 = np.fft.fft(y1, axis=axis) + result1 = np.fft.fft(y1, axis=axis, out=y1) + assert result1 is y1 + assert_array_equal(result1, expected1) + # In-place of part of the array; rest should be unchanged. + y2 = y.copy() + out2 = y2[:10] if axis == 0 else y2[:, :10] + expected2 = np.fft.fft(y2, n=10, axis=axis) + result2 = np.fft.fft(y2, n=10, axis=axis, out=out2) + assert result2 is out2 + assert_array_equal(result2, expected2) + if axis == 0: + assert_array_equal(y2[10:], y[10:]) + else: + assert_array_equal(y2[:, 10:], y[:, 10:]) + # In-place of another part of the array. + y3 = y.copy() + y3_sel = y3[5:] if axis == 0 else y3[:, 5:] + out3 = y3[5:15] if axis == 0 else y3[:, 5:15] + expected3 = np.fft.fft(y3_sel, n=10, axis=axis) + result3 = np.fft.fft(y3_sel, n=10, axis=axis, out=out3) + assert result3 is out3 + assert_array_equal(result3, expected3) + if axis == 0: + assert_array_equal(y3[:5], y[:5]) + assert_array_equal(y3[15:], y[15:]) + else: + assert_array_equal(y3[:, :5], y[:, :5]) + assert_array_equal(y3[:, 15:], y[:, 15:]) + # In-place with n > nin; rest should be unchanged. + y4 = y.copy() + y4_sel = y4[:10] if axis == 0 else y4[:, :10] + out4 = y4[:15] if axis == 0 else y4[:, :15] + expected4 = np.fft.fft(y4_sel, n=15, axis=axis) + result4 = np.fft.fft(y4_sel, n=15, axis=axis, out=out4) + assert result4 is out4 + assert_array_equal(result4, expected4) + if axis == 0: + assert_array_equal(y4[15:], y[15:]) + else: + assert_array_equal(y4[:, 15:], y[:, 15:]) + # Overwrite in a transpose. + y5 = y.copy() + out5 = y5.T + result5 = np.fft.fft(y5, axis=axis, out=out5) + assert result5 is out5 + assert_array_equal(result5, expected1) + # Reverse strides. + y6 = y.copy() + out6 = y6[::-1] if axis == 0 else y6[:, ::-1] + result6 = np.fft.fft(y6, axis=axis, out=out6) + assert result6 is out6 + assert_array_equal(result6, expected1) + + def test_fft_bad_out(self): + x = np.arange(30.) + with pytest.raises(TypeError, match="must be of ArrayType"): + np.fft.fft(x, out="") + with pytest.raises(ValueError, match="has wrong shape"): + np.fft.fft(x, out=np.zeros_like(x).reshape(5, -1)) + with pytest.raises(TypeError, match="Cannot cast"): + np.fft.fft(x, out=np.zeros_like(x, dtype=float)) + + @pytest.mark.parametrize('norm', (None, 'backward', 'ortho', 'forward')) + def test_ifft(self, norm): + x = random(30) + 1j*random(30) + assert_allclose( + x, np.fft.ifft(np.fft.fft(x, norm=norm), norm=norm), + atol=1e-6) + # Ensure we get the correct error message + with pytest.raises(ValueError, + match='Invalid number of FFT data points'): + np.fft.ifft([], norm=norm) + + def test_fft2(self): + x = random((30, 20)) + 1j*random((30, 20)) + assert_allclose(np.fft.fft(np.fft.fft(x, axis=1), axis=0), + np.fft.fft2(x), atol=1e-6) + assert_allclose(np.fft.fft2(x), + np.fft.fft2(x, norm="backward"), atol=1e-6) + assert_allclose(np.fft.fft2(x) / np.sqrt(30 * 20), + np.fft.fft2(x, norm="ortho"), atol=1e-6) + assert_allclose(np.fft.fft2(x) / (30. * 20.), + np.fft.fft2(x, norm="forward"), atol=1e-6) + + def test_ifft2(self): + x = random((30, 20)) + 1j*random((30, 20)) + assert_allclose(np.fft.ifft(np.fft.ifft(x, axis=1), axis=0), + np.fft.ifft2(x), atol=1e-6) + assert_allclose(np.fft.ifft2(x), + np.fft.ifft2(x, norm="backward"), atol=1e-6) + assert_allclose(np.fft.ifft2(x) * np.sqrt(30 * 20), + np.fft.ifft2(x, norm="ortho"), atol=1e-6) + assert_allclose(np.fft.ifft2(x) * (30. * 20.), + np.fft.ifft2(x, norm="forward"), atol=1e-6) + + def test_fftn(self): + x = random((30, 20, 10)) + 1j*random((30, 20, 10)) + assert_allclose( + np.fft.fft(np.fft.fft(np.fft.fft(x, axis=2), axis=1), axis=0), + np.fft.fftn(x), atol=1e-6) + assert_allclose(np.fft.fftn(x), + np.fft.fftn(x, norm="backward"), atol=1e-6) + assert_allclose(np.fft.fftn(x) / np.sqrt(30 * 20 * 10), + np.fft.fftn(x, norm="ortho"), atol=1e-6) + assert_allclose(np.fft.fftn(x) / (30. * 20. * 10.), + np.fft.fftn(x, norm="forward"), atol=1e-6) + + def test_ifftn(self): + x = random((30, 20, 10)) + 1j*random((30, 20, 10)) + assert_allclose( + np.fft.ifft(np.fft.ifft(np.fft.ifft(x, axis=2), axis=1), axis=0), + np.fft.ifftn(x), atol=1e-6) + assert_allclose(np.fft.ifftn(x), + np.fft.ifftn(x, norm="backward"), atol=1e-6) + assert_allclose(np.fft.ifftn(x) * np.sqrt(30 * 20 * 10), + np.fft.ifftn(x, norm="ortho"), atol=1e-6) + assert_allclose(np.fft.ifftn(x) * (30. * 20. * 10.), + np.fft.ifftn(x, norm="forward"), atol=1e-6) + + def test_rfft(self): + x = random(30) + for n in [x.size, 2*x.size]: + for norm in [None, 'backward', 'ortho', 'forward']: + assert_allclose( + np.fft.fft(x, n=n, norm=norm)[:(n//2 + 1)], + np.fft.rfft(x, n=n, norm=norm), atol=1e-6) + assert_allclose( + np.fft.rfft(x, n=n), + np.fft.rfft(x, n=n, norm="backward"), atol=1e-6) + assert_allclose( + np.fft.rfft(x, n=n) / np.sqrt(n), + np.fft.rfft(x, n=n, norm="ortho"), atol=1e-6) + assert_allclose( + np.fft.rfft(x, n=n) / n, + np.fft.rfft(x, n=n, norm="forward"), atol=1e-6) + + def test_rfft_even(self): + x = np.arange(8) + n = 4 + y = np.fft.rfft(x, n) + assert_allclose(y, np.fft.fft(x[:n])[:n//2 + 1], rtol=1e-14) + + def test_rfft_odd(self): + x = np.array([1, 0, 2, 3, -3]) + y = np.fft.rfft(x) + assert_allclose(y, np.fft.fft(x)[:3], rtol=1e-14) + + def test_irfft(self): + x = random(30) + assert_allclose(x, np.fft.irfft(np.fft.rfft(x)), atol=1e-6) + assert_allclose(x, np.fft.irfft(np.fft.rfft(x, norm="backward"), + norm="backward"), atol=1e-6) + assert_allclose(x, np.fft.irfft(np.fft.rfft(x, norm="ortho"), + norm="ortho"), atol=1e-6) + assert_allclose(x, np.fft.irfft(np.fft.rfft(x, norm="forward"), + norm="forward"), atol=1e-6) + + def test_rfft2(self): + x = random((30, 20)) + assert_allclose(np.fft.fft2(x)[:, :11], np.fft.rfft2(x), atol=1e-6) + assert_allclose(np.fft.rfft2(x), + np.fft.rfft2(x, norm="backward"), atol=1e-6) + assert_allclose(np.fft.rfft2(x) / np.sqrt(30 * 20), + np.fft.rfft2(x, norm="ortho"), atol=1e-6) + assert_allclose(np.fft.rfft2(x) / (30. * 20.), + np.fft.rfft2(x, norm="forward"), atol=1e-6) + + def test_irfft2(self): + x = random((30, 20)) + assert_allclose(x, np.fft.irfft2(np.fft.rfft2(x)), atol=1e-6) + assert_allclose(x, np.fft.irfft2(np.fft.rfft2(x, norm="backward"), + norm="backward"), atol=1e-6) + assert_allclose(x, np.fft.irfft2(np.fft.rfft2(x, norm="ortho"), + norm="ortho"), atol=1e-6) + assert_allclose(x, np.fft.irfft2(np.fft.rfft2(x, norm="forward"), + norm="forward"), atol=1e-6) + + def test_rfftn(self): + x = random((30, 20, 10)) + assert_allclose(np.fft.fftn(x)[:, :, :6], np.fft.rfftn(x), atol=1e-6) + assert_allclose(np.fft.rfftn(x), + np.fft.rfftn(x, norm="backward"), atol=1e-6) + assert_allclose(np.fft.rfftn(x) / np.sqrt(30 * 20 * 10), + np.fft.rfftn(x, norm="ortho"), atol=1e-6) + assert_allclose(np.fft.rfftn(x) / (30. * 20. * 10.), + np.fft.rfftn(x, norm="forward"), atol=1e-6) + + def test_irfftn(self): + x = random((30, 20, 10)) + assert_allclose(x, np.fft.irfftn(np.fft.rfftn(x)), atol=1e-6) + assert_allclose(x, np.fft.irfftn(np.fft.rfftn(x, norm="backward"), + norm="backward"), atol=1e-6) + assert_allclose(x, np.fft.irfftn(np.fft.rfftn(x, norm="ortho"), + norm="ortho"), atol=1e-6) + assert_allclose(x, np.fft.irfftn(np.fft.rfftn(x, norm="forward"), + norm="forward"), atol=1e-6) + + def test_hfft(self): + x = random(14) + 1j*random(14) + x_herm = np.concatenate((random(1), x, random(1))) + x = np.concatenate((x_herm, x[::-1].conj())) + assert_allclose(np.fft.fft(x), np.fft.hfft(x_herm), atol=1e-6) + assert_allclose(np.fft.hfft(x_herm), + np.fft.hfft(x_herm, norm="backward"), atol=1e-6) + assert_allclose(np.fft.hfft(x_herm) / np.sqrt(30), + np.fft.hfft(x_herm, norm="ortho"), atol=1e-6) + assert_allclose(np.fft.hfft(x_herm) / 30., + np.fft.hfft(x_herm, norm="forward"), atol=1e-6) + + def test_ihfft(self): + x = random(14) + 1j*random(14) + x_herm = np.concatenate((random(1), x, random(1))) + x = np.concatenate((x_herm, x[::-1].conj())) + assert_allclose(x_herm, np.fft.ihfft(np.fft.hfft(x_herm)), atol=1e-6) + assert_allclose(x_herm, np.fft.ihfft(np.fft.hfft(x_herm, + norm="backward"), norm="backward"), atol=1e-6) + assert_allclose(x_herm, np.fft.ihfft(np.fft.hfft(x_herm, + norm="ortho"), norm="ortho"), atol=1e-6) + assert_allclose(x_herm, np.fft.ihfft(np.fft.hfft(x_herm, + norm="forward"), norm="forward"), atol=1e-6) + + @pytest.mark.parametrize("op", [np.fft.fftn, np.fft.ifftn, + np.fft.rfftn, np.fft.irfftn]) + def test_axes(self, op): + x = random((30, 20, 10)) + axes = [(0, 1, 2), (0, 2, 1), (1, 0, 2), (1, 2, 0), (2, 0, 1), (2, 1, 0)] + for a in axes: + op_tr = op(np.transpose(x, a)) + tr_op = np.transpose(op(x, axes=a), a) + assert_allclose(op_tr, tr_op, atol=1e-6) + + @pytest.mark.parametrize("op", [np.fft.fftn, np.fft.ifftn, + np.fft.fft2, np.fft.ifft2]) + def test_s_negative_1(self, op): + x = np.arange(100).reshape(10, 10) + # should use the whole input array along the first axis + assert op(x, s=(-1, 5), axes=(0, 1)).shape == (10, 5) + + @pytest.mark.parametrize("op", [np.fft.fftn, np.fft.ifftn, + np.fft.rfftn, np.fft.irfftn]) + def test_s_axes_none(self, op): + x = np.arange(100).reshape(10, 10) + with pytest.warns(match='`axes` should not be `None` if `s`'): + op(x, s=(-1, 5)) + + @pytest.mark.parametrize("op", [np.fft.fft2, np.fft.ifft2]) + def test_s_axes_none_2D(self, op): + x = np.arange(100).reshape(10, 10) + with pytest.warns(match='`axes` should not be `None` if `s`'): + op(x, s=(-1, 5), axes=None) + + @pytest.mark.parametrize("op", [np.fft.fftn, np.fft.ifftn, + np.fft.rfftn, np.fft.irfftn, + np.fft.fft2, np.fft.ifft2]) + def test_s_contains_none(self, op): + x = random((30, 20, 10)) + with pytest.warns(match='array containing `None` values to `s`'): + op(x, s=(10, None, 10), axes=(0, 1, 2)) + + def test_all_1d_norm_preserving(self): + # verify that round-trip transforms are norm-preserving + x = random(30) + x_norm = np.linalg.norm(x) + n = x.size * 2 + func_pairs = [(np.fft.fft, np.fft.ifft), + (np.fft.rfft, np.fft.irfft), + # hfft: order so the first function takes x.size samples + # (necessary for comparison to x_norm above) + (np.fft.ihfft, np.fft.hfft), + ] + for forw, back in func_pairs: + for n in [x.size, 2*x.size]: + for norm in [None, 'backward', 'ortho', 'forward']: + tmp = forw(x, n=n, norm=norm) + tmp = back(tmp, n=n, norm=norm) + assert_allclose(x_norm, + np.linalg.norm(tmp), atol=1e-6) + + @pytest.mark.parametrize("axes", [(0, 1), (0, 2), None]) + @pytest.mark.parametrize("dtype", (complex, float)) + @pytest.mark.parametrize("transpose", (True, False)) + def test_fftn_out_argument(self, dtype, transpose, axes): + def zeros_like(x): + if transpose: + return np.zeros_like(x.T).T + else: + return np.zeros_like(x) + + # tests below only test the out parameter + if dtype is complex: + x = random((10, 5, 6)) + 1j*random((10, 5, 6)) + fft, ifft = np.fft.fftn, np.fft.ifftn + else: + x = random((10, 5, 6)) + fft, ifft = np.fft.rfftn, np.fft.irfftn + + expected = fft(x, axes=axes) + out = zeros_like(expected) + result = fft(x, out=out, axes=axes) + assert result is out + assert_array_equal(result, expected) + + expected2 = ifft(expected, axes=axes) + out2 = out if dtype is complex else zeros_like(expected2) + result2 = ifft(out, out=out2, axes=axes) + assert result2 is out2 + assert_array_equal(result2, expected2) + + @pytest.mark.parametrize("fft", [np.fft.fftn, np.fft.ifftn, np.fft.rfftn]) + def test_fftn_out_and_s_interaction(self, fft): + # With s, shape varies, so generally one cannot pass in out. + if fft is np.fft.rfftn: + x = random((10, 5, 6)) + else: + x = random((10, 5, 6)) + 1j*random((10, 5, 6)) + with pytest.raises(ValueError, match="has wrong shape"): + fft(x, out=np.zeros_like(x), s=(3, 3, 3), axes=(0, 1, 2)) + # Except on the first axis done (which is the last of axes). + s = (10, 5, 5) + expected = fft(x, s=s, axes=(0, 1, 2)) + out = np.zeros_like(expected) + result = fft(x, s=s, axes=(0, 1, 2), out=out) + assert result is out + assert_array_equal(result, expected) + + @pytest.mark.parametrize("s", [(9, 5, 5), (3, 3, 3)]) + def test_irfftn_out_and_s_interaction(self, s): + # Since for irfftn, the output is real and thus cannot be used for + # intermediate steps, it should always work. + x = random((9, 5, 6, 2)) + 1j*random((9, 5, 6, 2)) + expected = np.fft.irfftn(x, s=s, axes=(0, 1, 2)) + out = np.zeros_like(expected) + result = np.fft.irfftn(x, s=s, axes=(0, 1, 2), out=out) + assert result is out + assert_array_equal(result, expected) + + +@pytest.mark.parametrize( + "dtype", + [np.float32, np.float64, np.complex64, np.complex128]) +@pytest.mark.parametrize("order", ["F", 'non-contiguous']) +@pytest.mark.parametrize( + "fft", + [np.fft.fft, np.fft.fft2, np.fft.fftn, + np.fft.ifft, np.fft.ifft2, np.fft.ifftn]) +def test_fft_with_order(dtype, order, fft): + # Check that FFT/IFFT produces identical results for C, Fortran and + # non contiguous arrays + rng = np.random.RandomState(42) + X = rng.rand(8, 7, 13).astype(dtype, copy=False) + # See discussion in pull/14178 + _tol = 8.0 * np.sqrt(np.log2(X.size)) * np.finfo(X.dtype).eps + if order == 'F': + Y = np.asfortranarray(X) + else: + # Make a non contiguous array + Y = X[::-1] + X = np.ascontiguousarray(X[::-1]) + + if fft.__name__.endswith('fft'): + for axis in range(3): + X_res = fft(X, axis=axis) + Y_res = fft(Y, axis=axis) + assert_allclose(X_res, Y_res, atol=_tol, rtol=_tol) + elif fft.__name__.endswith(('fft2', 'fftn')): + axes = [(0, 1), (1, 2), (0, 2)] + if fft.__name__.endswith('fftn'): + axes.extend([(0,), (1,), (2,), None]) + for ax in axes: + X_res = fft(X, axes=ax) + Y_res = fft(Y, axes=ax) + assert_allclose(X_res, Y_res, atol=_tol, rtol=_tol) + else: + raise ValueError() + + +@pytest.mark.parametrize("order", ["F", "C"]) +@pytest.mark.parametrize("n", [None, 7, 12]) +def test_fft_output_order(order, n): + rng = np.random.RandomState(42) + x = rng.rand(10) + x = np.asarray(x, dtype=np.complex64, order=order) + res = np.fft.fft(x, n=n) + assert res.flags.c_contiguous == x.flags.c_contiguous + assert res.flags.f_contiguous == x.flags.f_contiguous + +@pytest.mark.skipif(IS_WASM, reason="Cannot start thread") +class TestFFTThreadSafe: + threads = 16 + input_shape = (800, 200) + + def _test_mtsame(self, func, *args): + def worker(args, q): + q.put(func(*args)) + + q = queue.Queue() + expected = func(*args) + + # Spin off a bunch of threads to call the same function simultaneously + t = [threading.Thread(target=worker, args=(args, q)) + for i in range(self.threads)] + [x.start() for x in t] + + [x.join() for x in t] + # Make sure all threads returned the correct value + for i in range(self.threads): + assert_array_equal(q.get(timeout=5), expected, + 'Function returned wrong value in multithreaded context') + + def test_fft(self): + a = np.ones(self.input_shape) * 1+0j + self._test_mtsame(np.fft.fft, a) + + def test_ifft(self): + a = np.ones(self.input_shape) * 1+0j + self._test_mtsame(np.fft.ifft, a) + + def test_rfft(self): + a = np.ones(self.input_shape) + self._test_mtsame(np.fft.rfft, a) + + def test_irfft(self): + a = np.ones(self.input_shape) * 1+0j + self._test_mtsame(np.fft.irfft, a) + + +def test_irfft_with_n_1_regression(): + # Regression test for gh-25661 + x = np.arange(10) + np.fft.irfft(x, n=1) + np.fft.hfft(x, n=1) + np.fft.irfft(np.array([0], complex), n=10) + + +def test_irfft_with_n_large_regression(): + # Regression test for gh-25679 + x = np.arange(5) * (1 + 1j) + result = np.fft.hfft(x, n=10) + expected = np.array([20., 9.91628173, -11.8819096, 7.1048486, + -6.62459848, 4., -3.37540152, -0.16057669, + 1.8819096, -20.86055364]) + assert_allclose(result, expected) + + +@pytest.mark.parametrize("fft", [ + np.fft.fft, np.fft.ifft, np.fft.rfft, np.fft.irfft +]) +@pytest.mark.parametrize("data", [ + np.array([False, True, False]), + np.arange(10, dtype=np.uint8), + np.arange(5, dtype=np.int16), +]) +def test_fft_with_integer_or_bool_input(data, fft): + # Regression test for gh-25819 + result = fft(data) + float_data = data.astype(np.result_type(data, 1.)) + expected = fft(float_data) + assert_array_equal(result, expected) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/__init__.py b/venv/lib/python3.12/site-packages/numpy/lib/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..22ad35e93c3560b50e1298cef4017f11c528afb5 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/__init__.py @@ -0,0 +1,89 @@ +""" +``numpy.lib`` is mostly a space for implementing functions that don't +belong in core or in another NumPy submodule with a clear purpose +(e.g. ``random``, ``fft``, ``linalg``, ``ma``). + +``numpy.lib``'s private submodules contain basic functions that are used by +other public modules and are useful to have in the main name-space. + +""" + +# Public submodules +# Note: recfunctions and (maybe) format are public too, but not imported +from . import array_utils +from . import introspect +from . import mixins +from . import npyio +from . import scimath +from . import stride_tricks + +# Private submodules +# load module names. See https://github.com/networkx/networkx/issues/5838 +from . import _type_check_impl +from . import _index_tricks_impl +from . import _nanfunctions_impl +from . import _function_base_impl +from . import _stride_tricks_impl +from . import _shape_base_impl +from . import _twodim_base_impl +from . import _ufunclike_impl +from . import _histograms_impl +from . import _utils_impl +from . import _arraysetops_impl +from . import _polynomial_impl +from . import _npyio_impl +from . import _arrayterator_impl +from . import _arraypad_impl +from . import _version + +# numpy.lib namespace members +from ._arrayterator_impl import Arrayterator +from ._version import NumpyVersion +from numpy._core._multiarray_umath import add_docstring, tracemalloc_domain +from numpy._core.function_base import add_newdoc + +__all__ = [ + "Arrayterator", "add_docstring", "add_newdoc", "array_utils", + "introspect", "mixins", "NumpyVersion", "npyio", "scimath", + "stride_tricks", "tracemalloc_domain" +] + +from numpy._pytesttester import PytestTester +test = PytestTester(__name__) +del PytestTester + +def __getattr__(attr): + # Warn for reprecated attributes + import math + import warnings + + if attr == "math": + warnings.warn( + "`np.lib.math` is a deprecated alias for the standard library " + "`math` module (Deprecated Numpy 1.25). Replace usages of " + "`numpy.lib.math` with `math`", DeprecationWarning, stacklevel=2) + return math + elif attr == "emath": + raise AttributeError( + "numpy.lib.emath was an alias for emath module that was removed " + "in NumPy 2.0. Replace usages of numpy.lib.emath with " + "numpy.emath." + ) + elif attr in ( + "histograms", "type_check", "nanfunctions", "function_base", + "arraypad", "arraysetops", "ufunclike", "utils", "twodim_base", + "shape_base", "polynomial", "index_tricks", + ): + raise AttributeError( + f"numpy.lib.{attr} is now private. If you are using a public " + "function, it should be available in the main numpy namespace, " + "otherwise check the NumPy 2.0 migration guide." + ) + elif attr == "arrayterator": + raise AttributeError( + "numpy.lib.arrayterator submodule is now private. To access " + "Arrayterator class use numpy.lib.Arrayterator." + ) + else: + raise AttributeError("module {!r} has no attribute " + "{!r}".format(__name__, attr)) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/__init__.pyi b/venv/lib/python3.12/site-packages/numpy/lib/__init__.pyi new file mode 100644 index 0000000000000000000000000000000000000000..b8bf2c5afbda4a9c9c47982eca823bc5a14a6f24 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/__init__.pyi @@ -0,0 +1,41 @@ +import math as math + +from numpy._pytesttester import PytestTester + +from numpy import ( + ndenumerate as ndenumerate, + ndindex as ndindex, +) + +from numpy.version import version + +from numpy.lib import ( + format as format, + mixins as mixins, + scimath as scimath, + stride_tricks as stride_tricks, + npyio as npyio, + array_utils as array_utils, +) + +from numpy.lib._version import ( + NumpyVersion as NumpyVersion, +) + +from numpy.lib._arrayterator_impl import ( + Arrayterator as Arrayterator, +) + +from numpy._core.multiarray import ( + add_docstring as add_docstring, + tracemalloc_domain as tracemalloc_domain, +) + +from numpy._core.function_base import ( + add_newdoc as add_newdoc, +) + +__all__: list[str] +test: PytestTester + +__version__ = version diff --git a/venv/lib/python3.12/site-packages/numpy/lib/__pycache__/__init__.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/lib/__pycache__/__init__.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..a5718f5304fdfca4b5c3b8cf942e6cfafdc5b9de Binary files /dev/null and b/venv/lib/python3.12/site-packages/numpy/lib/__pycache__/__init__.cpython-312.pyc differ diff --git a/venv/lib/python3.12/site-packages/numpy/lib/__pycache__/_array_utils_impl.cpython-312.pyc b/venv/lib/python3.12/site-packages/numpy/lib/__pycache__/_array_utils_impl.cpython-312.pyc new file mode 100644 index 0000000000000000000000000000000000000000..0f7226f8d99bacf1e5e42852e81a0433fc78bd4e Binary files 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0000000000000000000000000000000000000000..3e9d96e93dd9b51d3bfa37cb5709adcc5305fe94 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_array_utils_impl.py @@ -0,0 +1,61 @@ +""" +Miscellaneous utils. +""" +from numpy._core import asarray +from numpy._core.numeric import normalize_axis_tuple, normalize_axis_index +from numpy._utils import set_module + +__all__ = ["byte_bounds", "normalize_axis_tuple", "normalize_axis_index"] + + +@set_module("numpy.lib.array_utils") +def byte_bounds(a): + """ + Returns pointers to the end-points of an array. + + Parameters + ---------- + a : ndarray + Input array. It must conform to the Python-side of the array + interface. + + Returns + ------- + (low, high) : tuple of 2 integers + The first integer is the first byte of the array, the second + integer is just past the last byte of the array. If `a` is not + contiguous it will not use every byte between the (`low`, `high`) + values. + + Examples + -------- + >>> I = np.eye(2, dtype='f'); I.dtype + dtype('float32') + >>> low, high = np.lib.array_utils.byte_bounds(I) + >>> high - low == I.size*I.itemsize + True + >>> I = np.eye(2); I.dtype + dtype('float64') + >>> low, high = np.lib.array_utils.byte_bounds(I) + >>> high - low == I.size*I.itemsize + True + + """ + ai = a.__array_interface__ + a_data = ai['data'][0] + astrides = ai['strides'] + ashape = ai['shape'] + bytes_a = asarray(a).dtype.itemsize + + a_low = a_high = a_data + if astrides is None: + # contiguous case + a_high += a.size * bytes_a + else: + for shape, stride in zip(ashape, astrides): + if stride < 0: + a_low += (shape-1)*stride + else: + a_high += (shape-1)*stride + a_high += bytes_a + return a_low, a_high diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_array_utils_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_array_utils_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..a38a62f2813cd6a7bd60358b00320ba472151de2 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_array_utils_impl.pyi @@ -0,0 +1,25 @@ +from typing import Any, Iterable, Tuple + +from numpy import generic +from numpy.typing import NDArray + +__all__: list[str] + +# NOTE: In practice `byte_bounds` can (potentially) take any object +# implementing the `__array_interface__` protocol. The caveat is +# that certain keys, marked as optional in the spec, must be present for +# `byte_bounds`. This concerns `"strides"` and `"data"`. +def byte_bounds(a: generic | NDArray[Any]) -> tuple[int, int]: ... + +def normalize_axis_tuple( + axis: int | Iterable[int], + ndim: int = ..., + argname: None | str = ..., + allow_duplicate: None | bool = ..., +) -> Tuple[int, int]: ... + +def normalize_axis_index( + axis: int = ..., + ndim: int = ..., + msg_prefix: None | str = ..., +) -> int: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_arraypad_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_arraypad_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..af6c4da4c3b72e04fa8e62a83dc38537371e654a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_arraypad_impl.py @@ -0,0 +1,894 @@ +""" +The arraypad module contains a group of functions to pad values onto the edges +of an n-dimensional array. + +""" +import numpy as np +from numpy._core.overrides import array_function_dispatch +from numpy.lib._index_tricks_impl import ndindex + + +__all__ = ['pad'] + + +############################################################################### +# Private utility functions. + + +def _round_if_needed(arr, dtype): + """ + Rounds arr inplace if destination dtype is integer. + + Parameters + ---------- + arr : ndarray + Input array. + dtype : dtype + The dtype of the destination array. + """ + if np.issubdtype(dtype, np.integer): + arr.round(out=arr) + + +def _slice_at_axis(sl, axis): + """ + Construct tuple of slices to slice an array in the given dimension. + + Parameters + ---------- + sl : slice + The slice for the given dimension. + axis : int + The axis to which `sl` is applied. All other dimensions are left + "unsliced". + + Returns + ------- + sl : tuple of slices + A tuple with slices matching `shape` in length. + + Examples + -------- + >>> _slice_at_axis(slice(None, 3, -1), 1) + (slice(None, None, None), slice(None, 3, -1), (...,)) + """ + return (slice(None),) * axis + (sl,) + (...,) + + +def _view_roi(array, original_area_slice, axis): + """ + Get a view of the current region of interest during iterative padding. + + When padding multiple dimensions iteratively corner values are + unnecessarily overwritten multiple times. This function reduces the + working area for the first dimensions so that corners are excluded. + + Parameters + ---------- + array : ndarray + The array with the region of interest. + original_area_slice : tuple of slices + Denotes the area with original values of the unpadded array. + axis : int + The currently padded dimension assuming that `axis` is padded before + `axis` + 1. + + Returns + ------- + roi : ndarray + The region of interest of the original `array`. + """ + axis += 1 + sl = (slice(None),) * axis + original_area_slice[axis:] + return array[sl] + + +def _pad_simple(array, pad_width, fill_value=None): + """ + Pad array on all sides with either a single value or undefined values. + + Parameters + ---------- + array : ndarray + Array to grow. + pad_width : sequence of tuple[int, int] + Pad width on both sides for each dimension in `arr`. + fill_value : scalar, optional + If provided the padded area is filled with this value, otherwise + the pad area left undefined. + + Returns + ------- + padded : ndarray + The padded array with the same dtype as`array`. Its order will default + to C-style if `array` is not F-contiguous. + original_area_slice : tuple + A tuple of slices pointing to the area of the original array. + """ + # Allocate grown array + new_shape = tuple( + left + size + right + for size, (left, right) in zip(array.shape, pad_width) + ) + order = 'F' if array.flags.fnc else 'C' # Fortran and not also C-order + padded = np.empty(new_shape, dtype=array.dtype, order=order) + + if fill_value is not None: + padded.fill(fill_value) + + # Copy old array into correct space + original_area_slice = tuple( + slice(left, left + size) + for size, (left, right) in zip(array.shape, pad_width) + ) + padded[original_area_slice] = array + + return padded, original_area_slice + + +def _set_pad_area(padded, axis, width_pair, value_pair): + """ + Set empty-padded area in given dimension. + + Parameters + ---------- + padded : ndarray + Array with the pad area which is modified inplace. + axis : int + Dimension with the pad area to set. + width_pair : (int, int) + Pair of widths that mark the pad area on both sides in the given + dimension. + value_pair : tuple of scalars or ndarrays + Values inserted into the pad area on each side. It must match or be + broadcastable to the shape of `arr`. + """ + left_slice = _slice_at_axis(slice(None, width_pair[0]), axis) + padded[left_slice] = value_pair[0] + + right_slice = _slice_at_axis( + slice(padded.shape[axis] - width_pair[1], None), axis) + padded[right_slice] = value_pair[1] + + +def _get_edges(padded, axis, width_pair): + """ + Retrieve edge values from empty-padded array in given dimension. + + Parameters + ---------- + padded : ndarray + Empty-padded array. + axis : int + Dimension in which the edges are considered. + width_pair : (int, int) + Pair of widths that mark the pad area on both sides in the given + dimension. + + Returns + ------- + left_edge, right_edge : ndarray + Edge values of the valid area in `padded` in the given dimension. Its + shape will always match `padded` except for the dimension given by + `axis` which will have a length of 1. + """ + left_index = width_pair[0] + left_slice = _slice_at_axis(slice(left_index, left_index + 1), axis) + left_edge = padded[left_slice] + + right_index = padded.shape[axis] - width_pair[1] + right_slice = _slice_at_axis(slice(right_index - 1, right_index), axis) + right_edge = padded[right_slice] + + return left_edge, right_edge + + +def _get_linear_ramps(padded, axis, width_pair, end_value_pair): + """ + Construct linear ramps for empty-padded array in given dimension. + + Parameters + ---------- + padded : ndarray + Empty-padded array. + axis : int + Dimension in which the ramps are constructed. + width_pair : (int, int) + Pair of widths that mark the pad area on both sides in the given + dimension. + end_value_pair : (scalar, scalar) + End values for the linear ramps which form the edge of the fully padded + array. These values are included in the linear ramps. + + Returns + ------- + left_ramp, right_ramp : ndarray + Linear ramps to set on both sides of `padded`. + """ + edge_pair = _get_edges(padded, axis, width_pair) + + left_ramp, right_ramp = ( + np.linspace( + start=end_value, + stop=edge.squeeze(axis), # Dimension is replaced by linspace + num=width, + endpoint=False, + dtype=padded.dtype, + axis=axis + ) + for end_value, edge, width in zip( + end_value_pair, edge_pair, width_pair + ) + ) + + # Reverse linear space in appropriate dimension + right_ramp = right_ramp[_slice_at_axis(slice(None, None, -1), axis)] + + return left_ramp, right_ramp + + +def _get_stats(padded, axis, width_pair, length_pair, stat_func): + """ + Calculate statistic for the empty-padded array in given dimension. + + Parameters + ---------- + padded : ndarray + Empty-padded array. + axis : int + Dimension in which the statistic is calculated. + width_pair : (int, int) + Pair of widths that mark the pad area on both sides in the given + dimension. + length_pair : 2-element sequence of None or int + Gives the number of values in valid area from each side that is + taken into account when calculating the statistic. If None the entire + valid area in `padded` is considered. + stat_func : function + Function to compute statistic. The expected signature is + ``stat_func(x: ndarray, axis: int, keepdims: bool) -> ndarray``. + + Returns + ------- + left_stat, right_stat : ndarray + Calculated statistic for both sides of `padded`. + """ + # Calculate indices of the edges of the area with original values + left_index = width_pair[0] + right_index = padded.shape[axis] - width_pair[1] + # as well as its length + max_length = right_index - left_index + + # Limit stat_lengths to max_length + left_length, right_length = length_pair + if left_length is None or max_length < left_length: + left_length = max_length + if right_length is None or max_length < right_length: + right_length = max_length + + if (left_length == 0 or right_length == 0) \ + and stat_func in {np.amax, np.amin}: + # amax and amin can't operate on an empty array, + # raise a more descriptive warning here instead of the default one + raise ValueError("stat_length of 0 yields no value for padding") + + # Calculate statistic for the left side + left_slice = _slice_at_axis( + slice(left_index, left_index + left_length), axis) + left_chunk = padded[left_slice] + left_stat = stat_func(left_chunk, axis=axis, keepdims=True) + _round_if_needed(left_stat, padded.dtype) + + if left_length == right_length == max_length: + # return early as right_stat must be identical to left_stat + return left_stat, left_stat + + # Calculate statistic for the right side + right_slice = _slice_at_axis( + slice(right_index - right_length, right_index), axis) + right_chunk = padded[right_slice] + right_stat = stat_func(right_chunk, axis=axis, keepdims=True) + _round_if_needed(right_stat, padded.dtype) + + return left_stat, right_stat + + +def _set_reflect_both(padded, axis, width_pair, method, + original_period, include_edge=False): + """ + Pad `axis` of `arr` with reflection. + + Parameters + ---------- + padded : ndarray + Input array of arbitrary shape. + axis : int + Axis along which to pad `arr`. + width_pair : (int, int) + Pair of widths that mark the pad area on both sides in the given + dimension. + method : str + Controls method of reflection; options are 'even' or 'odd'. + original_period : int + Original length of data on `axis` of `arr`. + include_edge : bool + If true, edge value is included in reflection, otherwise the edge + value forms the symmetric axis to the reflection. + + Returns + ------- + pad_amt : tuple of ints, length 2 + New index positions of padding to do along the `axis`. If these are + both 0, padding is done in this dimension. + """ + left_pad, right_pad = width_pair + old_length = padded.shape[axis] - right_pad - left_pad + + if include_edge: + # Avoid wrapping with only a subset of the original area + # by ensuring period can only be a multiple of the original + # area's length. + old_length = old_length // original_period * original_period + # Edge is included, we need to offset the pad amount by 1 + edge_offset = 1 + else: + # Avoid wrapping with only a subset of the original area + # by ensuring period can only be a multiple of the original + # area's length. + old_length = ((old_length - 1) // (original_period - 1) + * (original_period - 1) + 1) + edge_offset = 0 # Edge is not included, no need to offset pad amount + old_length -= 1 # but must be omitted from the chunk + + if left_pad > 0: + # Pad with reflected values on left side: + # First limit chunk size which can't be larger than pad area + chunk_length = min(old_length, left_pad) + # Slice right to left, stop on or next to edge, start relative to stop + stop = left_pad - edge_offset + start = stop + chunk_length + left_slice = _slice_at_axis(slice(start, stop, -1), axis) + left_chunk = padded[left_slice] + + if method == "odd": + # Negate chunk and align with edge + edge_slice = _slice_at_axis(slice(left_pad, left_pad + 1), axis) + left_chunk = 2 * padded[edge_slice] - left_chunk + + # Insert chunk into padded area + start = left_pad - chunk_length + stop = left_pad + pad_area = _slice_at_axis(slice(start, stop), axis) + padded[pad_area] = left_chunk + # Adjust pointer to left edge for next iteration + left_pad -= chunk_length + + if right_pad > 0: + # Pad with reflected values on right side: + # First limit chunk size which can't be larger than pad area + chunk_length = min(old_length, right_pad) + # Slice right to left, start on or next to edge, stop relative to start + start = -right_pad + edge_offset - 2 + stop = start - chunk_length + right_slice = _slice_at_axis(slice(start, stop, -1), axis) + right_chunk = padded[right_slice] + + if method == "odd": + # Negate chunk and align with edge + edge_slice = _slice_at_axis( + slice(-right_pad - 1, -right_pad), axis) + right_chunk = 2 * padded[edge_slice] - right_chunk + + # Insert chunk into padded area + start = padded.shape[axis] - right_pad + stop = start + chunk_length + pad_area = _slice_at_axis(slice(start, stop), axis) + padded[pad_area] = right_chunk + # Adjust pointer to right edge for next iteration + right_pad -= chunk_length + + return left_pad, right_pad + + +def _set_wrap_both(padded, axis, width_pair, original_period): + """ + Pad `axis` of `arr` with wrapped values. + + Parameters + ---------- + padded : ndarray + Input array of arbitrary shape. + axis : int + Axis along which to pad `arr`. + width_pair : (int, int) + Pair of widths that mark the pad area on both sides in the given + dimension. + original_period : int + Original length of data on `axis` of `arr`. + + Returns + ------- + pad_amt : tuple of ints, length 2 + New index positions of padding to do along the `axis`. If these are + both 0, padding is done in this dimension. + """ + left_pad, right_pad = width_pair + period = padded.shape[axis] - right_pad - left_pad + # Avoid wrapping with only a subset of the original area by ensuring period + # can only be a multiple of the original area's length. + period = period // original_period * original_period + + # If the current dimension of `arr` doesn't contain enough valid values + # (not part of the undefined pad area) we need to pad multiple times. + # Each time the pad area shrinks on both sides which is communicated with + # these variables. + new_left_pad = 0 + new_right_pad = 0 + + if left_pad > 0: + # Pad with wrapped values on left side + # First slice chunk from left side of the non-pad area. + # Use min(period, left_pad) to ensure that chunk is not larger than + # pad area. + slice_end = left_pad + period + slice_start = slice_end - min(period, left_pad) + right_slice = _slice_at_axis(slice(slice_start, slice_end), axis) + right_chunk = padded[right_slice] + + if left_pad > period: + # Chunk is smaller than pad area + pad_area = _slice_at_axis(slice(left_pad - period, left_pad), axis) + new_left_pad = left_pad - period + else: + # Chunk matches pad area + pad_area = _slice_at_axis(slice(None, left_pad), axis) + padded[pad_area] = right_chunk + + if right_pad > 0: + # Pad with wrapped values on right side + # First slice chunk from right side of the non-pad area. + # Use min(period, right_pad) to ensure that chunk is not larger than + # pad area. + slice_start = -right_pad - period + slice_end = slice_start + min(period, right_pad) + left_slice = _slice_at_axis(slice(slice_start, slice_end), axis) + left_chunk = padded[left_slice] + + if right_pad > period: + # Chunk is smaller than pad area + pad_area = _slice_at_axis( + slice(-right_pad, -right_pad + period), axis) + new_right_pad = right_pad - period + else: + # Chunk matches pad area + pad_area = _slice_at_axis(slice(-right_pad, None), axis) + padded[pad_area] = left_chunk + + return new_left_pad, new_right_pad + + +def _as_pairs(x, ndim, as_index=False): + """ + Broadcast `x` to an array with the shape (`ndim`, 2). + + A helper function for `pad` that prepares and validates arguments like + `pad_width` for iteration in pairs. + + Parameters + ---------- + x : {None, scalar, array-like} + The object to broadcast to the shape (`ndim`, 2). + ndim : int + Number of pairs the broadcasted `x` will have. + as_index : bool, optional + If `x` is not None, try to round each element of `x` to an integer + (dtype `np.intp`) and ensure every element is positive. + + Returns + ------- + pairs : nested iterables, shape (`ndim`, 2) + The broadcasted version of `x`. + + Raises + ------ + ValueError + If `as_index` is True and `x` contains negative elements. + Or if `x` is not broadcastable to the shape (`ndim`, 2). + """ + if x is None: + # Pass through None as a special case, otherwise np.round(x) fails + # with an AttributeError + return ((None, None),) * ndim + + x = np.array(x) + if as_index: + x = np.round(x).astype(np.intp, copy=False) + + if x.ndim < 3: + # Optimization: Possibly use faster paths for cases where `x` has + # only 1 or 2 elements. `np.broadcast_to` could handle these as well + # but is currently slower + + if x.size == 1: + # x was supplied as a single value + x = x.ravel() # Ensure x[0] works for x.ndim == 0, 1, 2 + if as_index and x < 0: + raise ValueError("index can't contain negative values") + return ((x[0], x[0]),) * ndim + + if x.size == 2 and x.shape != (2, 1): + # x was supplied with a single value for each side + # but except case when each dimension has a single value + # which should be broadcasted to a pair, + # e.g. [[1], [2]] -> [[1, 1], [2, 2]] not [[1, 2], [1, 2]] + x = x.ravel() # Ensure x[0], x[1] works + if as_index and (x[0] < 0 or x[1] < 0): + raise ValueError("index can't contain negative values") + return ((x[0], x[1]),) * ndim + + if as_index and x.min() < 0: + raise ValueError("index can't contain negative values") + + # Converting the array with `tolist` seems to improve performance + # when iterating and indexing the result (see usage in `pad`) + return np.broadcast_to(x, (ndim, 2)).tolist() + + +def _pad_dispatcher(array, pad_width, mode=None, **kwargs): + return (array,) + + +############################################################################### +# Public functions + + +@array_function_dispatch(_pad_dispatcher, module='numpy') +def pad(array, pad_width, mode='constant', **kwargs): + """ + Pad an array. + + Parameters + ---------- + array : array_like of rank N + The array to pad. + pad_width : {sequence, array_like, int} + Number of values padded to the edges of each axis. + ``((before_1, after_1), ... (before_N, after_N))`` unique pad widths + for each axis. + ``(before, after)`` or ``((before, after),)`` yields same before + and after pad for each axis. + ``(pad,)`` or ``int`` is a shortcut for before = after = pad width + for all axes. + mode : str or function, optional + One of the following string values or a user supplied function. + + 'constant' (default) + Pads with a constant value. + 'edge' + Pads with the edge values of array. + 'linear_ramp' + Pads with the linear ramp between end_value and the + array edge value. + 'maximum' + Pads with the maximum value of all or part of the + vector along each axis. + 'mean' + Pads with the mean value of all or part of the + vector along each axis. + 'median' + Pads with the median value of all or part of the + vector along each axis. + 'minimum' + Pads with the minimum value of all or part of the + vector along each axis. + 'reflect' + Pads with the reflection of the vector mirrored on + the first and last values of the vector along each + axis. + 'symmetric' + Pads with the reflection of the vector mirrored + along the edge of the array. + 'wrap' + Pads with the wrap of the vector along the axis. + The first values are used to pad the end and the + end values are used to pad the beginning. + 'empty' + Pads with undefined values. + + .. versionadded:: 1.17 + + + Padding function, see Notes. + stat_length : sequence or int, optional + Used in 'maximum', 'mean', 'median', and 'minimum'. Number of + values at edge of each axis used to calculate the statistic value. + + ``((before_1, after_1), ... (before_N, after_N))`` unique statistic + lengths for each axis. + + ``(before, after)`` or ``((before, after),)`` yields same before + and after statistic lengths for each axis. + + ``(stat_length,)`` or ``int`` is a shortcut for + ``before = after = statistic`` length for all axes. + + Default is ``None``, to use the entire axis. + constant_values : sequence or scalar, optional + Used in 'constant'. The values to set the padded values for each + axis. + + ``((before_1, after_1), ... (before_N, after_N))`` unique pad constants + for each axis. + + ``(before, after)`` or ``((before, after),)`` yields same before + and after constants for each axis. + + ``(constant,)`` or ``constant`` is a shortcut for + ``before = after = constant`` for all axes. + + Default is 0. + end_values : sequence or scalar, optional + Used in 'linear_ramp'. The values used for the ending value of the + linear_ramp and that will form the edge of the padded array. + + ``((before_1, after_1), ... (before_N, after_N))`` unique end values + for each axis. + + ``(before, after)`` or ``((before, after),)`` yields same before + and after end values for each axis. + + ``(constant,)`` or ``constant`` is a shortcut for + ``before = after = constant`` for all axes. + + Default is 0. + reflect_type : {'even', 'odd'}, optional + Used in 'reflect', and 'symmetric'. The 'even' style is the + default with an unaltered reflection around the edge value. For + the 'odd' style, the extended part of the array is created by + subtracting the reflected values from two times the edge value. + + Returns + ------- + pad : ndarray + Padded array of rank equal to `array` with shape increased + according to `pad_width`. + + Notes + ----- + .. versionadded:: 1.7.0 + + For an array with rank greater than 1, some of the padding of later + axes is calculated from padding of previous axes. This is easiest to + think about with a rank 2 array where the corners of the padded array + are calculated by using padded values from the first axis. + + The padding function, if used, should modify a rank 1 array in-place. It + has the following signature:: + + padding_func(vector, iaxis_pad_width, iaxis, kwargs) + + where + + vector : ndarray + A rank 1 array already padded with zeros. Padded values are + vector[:iaxis_pad_width[0]] and vector[-iaxis_pad_width[1]:]. + iaxis_pad_width : tuple + A 2-tuple of ints, iaxis_pad_width[0] represents the number of + values padded at the beginning of vector where + iaxis_pad_width[1] represents the number of values padded at + the end of vector. + iaxis : int + The axis currently being calculated. + kwargs : dict + Any keyword arguments the function requires. + + Examples + -------- + >>> a = [1, 2, 3, 4, 5] + >>> np.pad(a, (2, 3), 'constant', constant_values=(4, 6)) + array([4, 4, 1, ..., 6, 6, 6]) + + >>> np.pad(a, (2, 3), 'edge') + array([1, 1, 1, ..., 5, 5, 5]) + + >>> np.pad(a, (2, 3), 'linear_ramp', end_values=(5, -4)) + array([ 5, 3, 1, 2, 3, 4, 5, 2, -1, -4]) + + >>> np.pad(a, (2,), 'maximum') + array([5, 5, 1, 2, 3, 4, 5, 5, 5]) + + >>> np.pad(a, (2,), 'mean') + array([3, 3, 1, 2, 3, 4, 5, 3, 3]) + + >>> np.pad(a, (2,), 'median') + array([3, 3, 1, 2, 3, 4, 5, 3, 3]) + + >>> a = [[1, 2], [3, 4]] + >>> np.pad(a, ((3, 2), (2, 3)), 'minimum') + array([[1, 1, 1, 2, 1, 1, 1], + [1, 1, 1, 2, 1, 1, 1], + [1, 1, 1, 2, 1, 1, 1], + [1, 1, 1, 2, 1, 1, 1], + [3, 3, 3, 4, 3, 3, 3], + [1, 1, 1, 2, 1, 1, 1], + [1, 1, 1, 2, 1, 1, 1]]) + + >>> a = [1, 2, 3, 4, 5] + >>> np.pad(a, (2, 3), 'reflect') + array([3, 2, 1, 2, 3, 4, 5, 4, 3, 2]) + + >>> np.pad(a, (2, 3), 'reflect', reflect_type='odd') + array([-1, 0, 1, 2, 3, 4, 5, 6, 7, 8]) + + >>> np.pad(a, (2, 3), 'symmetric') + array([2, 1, 1, 2, 3, 4, 5, 5, 4, 3]) + + >>> np.pad(a, (2, 3), 'symmetric', reflect_type='odd') + array([0, 1, 1, 2, 3, 4, 5, 5, 6, 7]) + + >>> np.pad(a, (2, 3), 'wrap') + array([4, 5, 1, 2, 3, 4, 5, 1, 2, 3]) + + >>> def pad_with(vector, pad_width, iaxis, kwargs): + ... pad_value = kwargs.get('padder', 10) + ... vector[:pad_width[0]] = pad_value + ... vector[-pad_width[1]:] = pad_value + >>> a = np.arange(6) + >>> a = a.reshape((2, 3)) + >>> np.pad(a, 2, pad_with) + array([[10, 10, 10, 10, 10, 10, 10], + [10, 10, 10, 10, 10, 10, 10], + [10, 10, 0, 1, 2, 10, 10], + [10, 10, 3, 4, 5, 10, 10], + [10, 10, 10, 10, 10, 10, 10], + [10, 10, 10, 10, 10, 10, 10]]) + >>> np.pad(a, 2, pad_with, padder=100) + array([[100, 100, 100, 100, 100, 100, 100], + [100, 100, 100, 100, 100, 100, 100], + [100, 100, 0, 1, 2, 100, 100], + [100, 100, 3, 4, 5, 100, 100], + [100, 100, 100, 100, 100, 100, 100], + [100, 100, 100, 100, 100, 100, 100]]) + """ + array = np.asarray(array) + pad_width = np.asarray(pad_width) + + if not pad_width.dtype.kind == 'i': + raise TypeError('`pad_width` must be of integral type.') + + # Broadcast to shape (array.ndim, 2) + pad_width = _as_pairs(pad_width, array.ndim, as_index=True) + + if callable(mode): + # Old behavior: Use user-supplied function with np.apply_along_axis + function = mode + # Create a new zero padded array + padded, _ = _pad_simple(array, pad_width, fill_value=0) + # And apply along each axis + + for axis in range(padded.ndim): + # Iterate using ndindex as in apply_along_axis, but assuming that + # function operates inplace on the padded array. + + # view with the iteration axis at the end + view = np.moveaxis(padded, axis, -1) + + # compute indices for the iteration axes, and append a trailing + # ellipsis to prevent 0d arrays decaying to scalars (gh-8642) + inds = ndindex(view.shape[:-1]) + inds = (ind + (Ellipsis,) for ind in inds) + for ind in inds: + function(view[ind], pad_width[axis], axis, kwargs) + + return padded + + # Make sure that no unsupported keywords were passed for the current mode + allowed_kwargs = { + 'empty': [], 'edge': [], 'wrap': [], + 'constant': ['constant_values'], + 'linear_ramp': ['end_values'], + 'maximum': ['stat_length'], + 'mean': ['stat_length'], + 'median': ['stat_length'], + 'minimum': ['stat_length'], + 'reflect': ['reflect_type'], + 'symmetric': ['reflect_type'], + } + try: + unsupported_kwargs = set(kwargs) - set(allowed_kwargs[mode]) + except KeyError: + raise ValueError("mode '{}' is not supported".format(mode)) from None + if unsupported_kwargs: + raise ValueError("unsupported keyword arguments for mode '{}': {}" + .format(mode, unsupported_kwargs)) + + stat_functions = {"maximum": np.amax, "minimum": np.amin, + "mean": np.mean, "median": np.median} + + # Create array with final shape and original values + # (padded area is undefined) + padded, original_area_slice = _pad_simple(array, pad_width) + # And prepare iteration over all dimensions + # (zipping may be more readable than using enumerate) + axes = range(padded.ndim) + + if mode == "constant": + values = kwargs.get("constant_values", 0) + values = _as_pairs(values, padded.ndim) + for axis, width_pair, value_pair in zip(axes, pad_width, values): + roi = _view_roi(padded, original_area_slice, axis) + _set_pad_area(roi, axis, width_pair, value_pair) + + elif mode == "empty": + pass # Do nothing as _pad_simple already returned the correct result + + elif array.size == 0: + # Only modes "constant" and "empty" can extend empty axes, all other + # modes depend on `array` not being empty + # -> ensure every empty axis is only "padded with 0" + for axis, width_pair in zip(axes, pad_width): + if array.shape[axis] == 0 and any(width_pair): + raise ValueError( + "can't extend empty axis {} using modes other than " + "'constant' or 'empty'".format(axis) + ) + # passed, don't need to do anything more as _pad_simple already + # returned the correct result + + elif mode == "edge": + for axis, width_pair in zip(axes, pad_width): + roi = _view_roi(padded, original_area_slice, axis) + edge_pair = _get_edges(roi, axis, width_pair) + _set_pad_area(roi, axis, width_pair, edge_pair) + + elif mode == "linear_ramp": + end_values = kwargs.get("end_values", 0) + end_values = _as_pairs(end_values, padded.ndim) + for axis, width_pair, value_pair in zip(axes, pad_width, end_values): + roi = _view_roi(padded, original_area_slice, axis) + ramp_pair = _get_linear_ramps(roi, axis, width_pair, value_pair) + _set_pad_area(roi, axis, width_pair, ramp_pair) + + elif mode in stat_functions: + func = stat_functions[mode] + length = kwargs.get("stat_length", None) + length = _as_pairs(length, padded.ndim, as_index=True) + for axis, width_pair, length_pair in zip(axes, pad_width, length): + roi = _view_roi(padded, original_area_slice, axis) + stat_pair = _get_stats(roi, axis, width_pair, length_pair, func) + _set_pad_area(roi, axis, width_pair, stat_pair) + + elif mode in {"reflect", "symmetric"}: + method = kwargs.get("reflect_type", "even") + include_edge = True if mode == "symmetric" else False + for axis, (left_index, right_index) in zip(axes, pad_width): + if array.shape[axis] == 1 and (left_index > 0 or right_index > 0): + # Extending singleton dimension for 'reflect' is legacy + # behavior; it really should raise an error. + edge_pair = _get_edges(padded, axis, (left_index, right_index)) + _set_pad_area( + padded, axis, (left_index, right_index), edge_pair) + continue + + roi = _view_roi(padded, original_area_slice, axis) + while left_index > 0 or right_index > 0: + # Iteratively pad until dimension is filled with reflected + # values. This is necessary if the pad area is larger than + # the length of the original values in the current dimension. + left_index, right_index = _set_reflect_both( + roi, axis, (left_index, right_index), + method, array.shape[axis], include_edge + ) + + elif mode == "wrap": + for axis, (left_index, right_index) in zip(axes, pad_width): + roi = _view_roi(padded, original_area_slice, axis) + original_period = padded.shape[axis] - right_index - left_index + while left_index > 0 or right_index > 0: + # Iteratively pad until dimension is filled with wrapped + # values. This is necessary if the pad area is larger than + # the length of the original values in the current dimension. + left_index, right_index = _set_wrap_both( + roi, axis, (left_index, right_index), original_period) + + return padded diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_arraypad_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_arraypad_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..1ac6fc7d91c868ba077235b8229cd00869386660 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_arraypad_impl.pyi @@ -0,0 +1,85 @@ +from typing import ( + Literal as L, + Any, + overload, + TypeVar, + Protocol, +) + +from numpy import generic + +from numpy._typing import ( + ArrayLike, + NDArray, + _ArrayLikeInt, + _ArrayLike, +) + +_SCT = TypeVar("_SCT", bound=generic) + +class _ModeFunc(Protocol): + def __call__( + self, + vector: NDArray[Any], + iaxis_pad_width: tuple[int, int], + iaxis: int, + kwargs: dict[str, Any], + /, + ) -> None: ... + +_ModeKind = L[ + "constant", + "edge", + "linear_ramp", + "maximum", + "mean", + "median", + "minimum", + "reflect", + "symmetric", + "wrap", + "empty", +] + +__all__: list[str] + +# TODO: In practice each keyword argument is exclusive to one or more +# specific modes. Consider adding more overloads to express this in the future. + +# Expand `**kwargs` into explicit keyword-only arguments +@overload +def pad( + array: _ArrayLike[_SCT], + pad_width: _ArrayLikeInt, + mode: _ModeKind = ..., + *, + stat_length: None | _ArrayLikeInt = ..., + constant_values: ArrayLike = ..., + end_values: ArrayLike = ..., + reflect_type: L["odd", "even"] = ..., +) -> NDArray[_SCT]: ... +@overload +def pad( + array: ArrayLike, + pad_width: _ArrayLikeInt, + mode: _ModeKind = ..., + *, + stat_length: None | _ArrayLikeInt = ..., + constant_values: ArrayLike = ..., + end_values: ArrayLike = ..., + reflect_type: L["odd", "even"] = ..., +) -> NDArray[Any]: ... +@overload +def pad( + array: _ArrayLike[_SCT], + pad_width: _ArrayLikeInt, + mode: _ModeFunc, + **kwargs: Any, +) -> NDArray[_SCT]: ... +@overload +def pad( + array: ArrayLike, + pad_width: _ArrayLikeInt, + mode: _ModeFunc, + **kwargs: Any, +) -> NDArray[Any]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_arraysetops_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_arraysetops_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..ebcb15f083fad4c2116affa6d6495892b7e8616b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_arraysetops_impl.py @@ -0,0 +1,1186 @@ +""" +Set operations for arrays based on sorting. + +Notes +----- + +For floating point arrays, inaccurate results may appear due to usual round-off +and floating point comparison issues. + +Speed could be gained in some operations by an implementation of +`numpy.sort`, that can provide directly the permutation vectors, thus avoiding +calls to `numpy.argsort`. + +Original author: Robert Cimrman + +""" +import functools +import warnings +from typing import NamedTuple + +import numpy as np +from numpy._core import overrides +from numpy._core._multiarray_umath import _array_converter + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +__all__ = [ + "ediff1d", "in1d", "intersect1d", "isin", "setdiff1d", "setxor1d", + "union1d", "unique", "unique_all", "unique_counts", "unique_inverse", + "unique_values" +] + + +def _ediff1d_dispatcher(ary, to_end=None, to_begin=None): + return (ary, to_end, to_begin) + + +@array_function_dispatch(_ediff1d_dispatcher) +def ediff1d(ary, to_end=None, to_begin=None): + """ + The differences between consecutive elements of an array. + + Parameters + ---------- + ary : array_like + If necessary, will be flattened before the differences are taken. + to_end : array_like, optional + Number(s) to append at the end of the returned differences. + to_begin : array_like, optional + Number(s) to prepend at the beginning of the returned differences. + + Returns + ------- + ediff1d : ndarray + The differences. Loosely, this is ``ary.flat[1:] - ary.flat[:-1]``. + + See Also + -------- + diff, gradient + + Notes + ----- + When applied to masked arrays, this function drops the mask information + if the `to_begin` and/or `to_end` parameters are used. + + Examples + -------- + >>> x = np.array([1, 2, 4, 7, 0]) + >>> np.ediff1d(x) + array([ 1, 2, 3, -7]) + + >>> np.ediff1d(x, to_begin=-99, to_end=np.array([88, 99])) + array([-99, 1, 2, ..., -7, 88, 99]) + + The returned array is always 1D. + + >>> y = [[1, 2, 4], [1, 6, 24]] + >>> np.ediff1d(y) + array([ 1, 2, -3, 5, 18]) + + """ + conv = _array_converter(ary) + # Convert to (any) array and ravel: + ary = conv[0].ravel() + + # enforce that the dtype of `ary` is used for the output + dtype_req = ary.dtype + + # fast track default case + if to_begin is None and to_end is None: + return ary[1:] - ary[:-1] + + if to_begin is None: + l_begin = 0 + else: + to_begin = np.asanyarray(to_begin) + if not np.can_cast(to_begin, dtype_req, casting="same_kind"): + raise TypeError("dtype of `to_begin` must be compatible " + "with input `ary` under the `same_kind` rule.") + + to_begin = to_begin.ravel() + l_begin = len(to_begin) + + if to_end is None: + l_end = 0 + else: + to_end = np.asanyarray(to_end) + if not np.can_cast(to_end, dtype_req, casting="same_kind"): + raise TypeError("dtype of `to_end` must be compatible " + "with input `ary` under the `same_kind` rule.") + + to_end = to_end.ravel() + l_end = len(to_end) + + # do the calculation in place and copy to_begin and to_end + l_diff = max(len(ary) - 1, 0) + result = np.empty_like(ary, shape=l_diff + l_begin + l_end) + + if l_begin > 0: + result[:l_begin] = to_begin + if l_end > 0: + result[l_begin + l_diff:] = to_end + np.subtract(ary[1:], ary[:-1], result[l_begin:l_begin + l_diff]) + + return conv.wrap(result) + + +def _unpack_tuple(x): + """ Unpacks one-element tuples for use as return values """ + if len(x) == 1: + return x[0] + else: + return x + + +def _unique_dispatcher(ar, return_index=None, return_inverse=None, + return_counts=None, axis=None, *, equal_nan=None): + return (ar,) + + +@array_function_dispatch(_unique_dispatcher) +def unique(ar, return_index=False, return_inverse=False, + return_counts=False, axis=None, *, equal_nan=True): + """ + Find the unique elements of an array. + + Returns the sorted unique elements of an array. There are three optional + outputs in addition to the unique elements: + + * the indices of the input array that give the unique values + * the indices of the unique array that reconstruct the input array + * the number of times each unique value comes up in the input array + + Parameters + ---------- + ar : array_like + Input array. Unless `axis` is specified, this will be flattened if it + is not already 1-D. + return_index : bool, optional + If True, also return the indices of `ar` (along the specified axis, + if provided, or in the flattened array) that result in the unique array. + return_inverse : bool, optional + If True, also return the indices of the unique array (for the specified + axis, if provided) that can be used to reconstruct `ar`. + return_counts : bool, optional + If True, also return the number of times each unique item appears + in `ar`. + axis : int or None, optional + The axis to operate on. If None, `ar` will be flattened. If an integer, + the subarrays indexed by the given axis will be flattened and treated + as the elements of a 1-D array with the dimension of the given axis, + see the notes for more details. Object arrays or structured arrays + that contain objects are not supported if the `axis` kwarg is used. The + default is None. + + .. versionadded:: 1.13.0 + + equal_nan : bool, optional + If True, collapses multiple NaN values in the return array into one. + + .. versionadded:: 1.24 + + Returns + ------- + unique : ndarray + The sorted unique values. + unique_indices : ndarray, optional + The indices of the first occurrences of the unique values in the + original array. Only provided if `return_index` is True. + unique_inverse : ndarray, optional + The indices to reconstruct the original array from the + unique array. Only provided if `return_inverse` is True. + unique_counts : ndarray, optional + The number of times each of the unique values comes up in the + original array. Only provided if `return_counts` is True. + + .. versionadded:: 1.9.0 + + See Also + -------- + repeat : Repeat elements of an array. + + Notes + ----- + When an axis is specified the subarrays indexed by the axis are sorted. + This is done by making the specified axis the first dimension of the array + (move the axis to the first dimension to keep the order of the other axes) + and then flattening the subarrays in C order. The flattened subarrays are + then viewed as a structured type with each element given a label, with the + effect that we end up with a 1-D array of structured types that can be + treated in the same way as any other 1-D array. The result is that the + flattened subarrays are sorted in lexicographic order starting with the + first element. + + .. versionchanged: 1.21 + If nan values are in the input array, a single nan is put + to the end of the sorted unique values. + + Also for complex arrays all NaN values are considered equivalent + (no matter whether the NaN is in the real or imaginary part). + As the representant for the returned array the smallest one in the + lexicographical order is chosen - see np.sort for how the lexicographical + order is defined for complex arrays. + + .. versionchanged: 2.0 + For multi-dimensional inputs, ``unique_inverse`` is reshaped + such that the input can be reconstructed using + ``np.take(unique, unique_inverse, axis=axis)``. The result is + now not 1-dimensional when ``axis=None``. + + Note that in NumPy 2.0.0 a higher dimensional array was returned also + when ``axis`` was not ``None``. This was reverted, but + ``inverse.reshape(-1)`` can be used to ensure compatibility with both + versions. + + Examples + -------- + >>> np.unique([1, 1, 2, 2, 3, 3]) + array([1, 2, 3]) + >>> a = np.array([[1, 1], [2, 3]]) + >>> np.unique(a) + array([1, 2, 3]) + + Return the unique rows of a 2D array + + >>> a = np.array([[1, 0, 0], [1, 0, 0], [2, 3, 4]]) + >>> np.unique(a, axis=0) + array([[1, 0, 0], [2, 3, 4]]) + + Return the indices of the original array that give the unique values: + + >>> a = np.array(['a', 'b', 'b', 'c', 'a']) + >>> u, indices = np.unique(a, return_index=True) + >>> u + array(['a', 'b', 'c'], dtype='>> indices + array([0, 1, 3]) + >>> a[indices] + array(['a', 'b', 'c'], dtype='>> a = np.array([1, 2, 6, 4, 2, 3, 2]) + >>> u, indices = np.unique(a, return_inverse=True) + >>> u + array([1, 2, 3, 4, 6]) + >>> indices + array([0, 1, 4, 3, 1, 2, 1]) + >>> u[indices] + array([1, 2, 6, 4, 2, 3, 2]) + + Reconstruct the input values from the unique values and counts: + + >>> a = np.array([1, 2, 6, 4, 2, 3, 2]) + >>> values, counts = np.unique(a, return_counts=True) + >>> values + array([1, 2, 3, 4, 6]) + >>> counts + array([1, 3, 1, 1, 1]) + >>> np.repeat(values, counts) + array([1, 2, 2, 2, 3, 4, 6]) # original order not preserved + + """ + ar = np.asanyarray(ar) + if axis is None: + ret = _unique1d(ar, return_index, return_inverse, return_counts, + equal_nan=equal_nan, inverse_shape=ar.shape, axis=None) + return _unpack_tuple(ret) + + # axis was specified and not None + try: + ar = np.moveaxis(ar, axis, 0) + except np.exceptions.AxisError: + # this removes the "axis1" or "axis2" prefix from the error message + raise np.exceptions.AxisError(axis, ar.ndim) from None + inverse_shape = [1] * ar.ndim + inverse_shape[axis] = ar.shape[0] + + # Must reshape to a contiguous 2D array for this to work... + orig_shape, orig_dtype = ar.shape, ar.dtype + ar = ar.reshape(orig_shape[0], np.prod(orig_shape[1:], dtype=np.intp)) + ar = np.ascontiguousarray(ar) + dtype = [('f{i}'.format(i=i), ar.dtype) for i in range(ar.shape[1])] + + # At this point, `ar` has shape `(n, m)`, and `dtype` is a structured + # data type with `m` fields where each field has the data type of `ar`. + # In the following, we create the array `consolidated`, which has + # shape `(n,)` with data type `dtype`. + try: + if ar.shape[1] > 0: + consolidated = ar.view(dtype) + else: + # If ar.shape[1] == 0, then dtype will be `np.dtype([])`, which is + # a data type with itemsize 0, and the call `ar.view(dtype)` will + # fail. Instead, we'll use `np.empty` to explicitly create the + # array with shape `(len(ar),)`. Because `dtype` in this case has + # itemsize 0, the total size of the result is still 0 bytes. + consolidated = np.empty(len(ar), dtype=dtype) + except TypeError as e: + # There's no good way to do this for object arrays, etc... + msg = 'The axis argument to unique is not supported for dtype {dt}' + raise TypeError(msg.format(dt=ar.dtype)) from e + + def reshape_uniq(uniq): + n = len(uniq) + uniq = uniq.view(orig_dtype) + uniq = uniq.reshape(n, *orig_shape[1:]) + uniq = np.moveaxis(uniq, 0, axis) + return uniq + + output = _unique1d(consolidated, return_index, + return_inverse, return_counts, + equal_nan=equal_nan, inverse_shape=inverse_shape, + axis=axis) + output = (reshape_uniq(output[0]),) + output[1:] + return _unpack_tuple(output) + + +def _unique1d(ar, return_index=False, return_inverse=False, + return_counts=False, *, equal_nan=True, inverse_shape=None, + axis=None): + """ + Find the unique elements of an array, ignoring shape. + """ + ar = np.asanyarray(ar).flatten() + + optional_indices = return_index or return_inverse + + if optional_indices: + perm = ar.argsort(kind='mergesort' if return_index else 'quicksort') + aux = ar[perm] + else: + ar.sort() + aux = ar + mask = np.empty(aux.shape, dtype=np.bool) + mask[:1] = True + if (equal_nan and aux.shape[0] > 0 and aux.dtype.kind in "cfmM" and + np.isnan(aux[-1])): + if aux.dtype.kind == "c": # for complex all NaNs are considered equivalent + aux_firstnan = np.searchsorted(np.isnan(aux), True, side='left') + else: + aux_firstnan = np.searchsorted(aux, aux[-1], side='left') + if aux_firstnan > 0: + mask[1:aux_firstnan] = ( + aux[1:aux_firstnan] != aux[:aux_firstnan - 1]) + mask[aux_firstnan] = True + mask[aux_firstnan + 1:] = False + else: + mask[1:] = aux[1:] != aux[:-1] + + ret = (aux[mask],) + if return_index: + ret += (perm[mask],) + if return_inverse: + imask = np.cumsum(mask) - 1 + inv_idx = np.empty(mask.shape, dtype=np.intp) + inv_idx[perm] = imask + ret += (inv_idx.reshape(inverse_shape) if axis is None else inv_idx,) + if return_counts: + idx = np.concatenate(np.nonzero(mask) + ([mask.size],)) + ret += (np.diff(idx),) + return ret + + +# Array API set functions + +class UniqueAllResult(NamedTuple): + values: np.ndarray + indices: np.ndarray + inverse_indices: np.ndarray + counts: np.ndarray + + +class UniqueCountsResult(NamedTuple): + values: np.ndarray + counts: np.ndarray + + +class UniqueInverseResult(NamedTuple): + values: np.ndarray + inverse_indices: np.ndarray + + +def _unique_all_dispatcher(x, /): + return (x,) + + +@array_function_dispatch(_unique_all_dispatcher) +def unique_all(x): + """ + Find the unique elements of an array, and counts, inverse and indices. + + This function is an Array API compatible alternative to: + + >>> x = np.array([1, 1, 2]) + >>> np.unique(x, return_index=True, return_inverse=True, + ... return_counts=True, equal_nan=False) + (array([1, 2]), array([0, 2]), array([0, 0, 1]), array([2, 1])) + + Parameters + ---------- + x : array_like + Input array. It will be flattened if it is not already 1-D. + + Returns + ------- + out : namedtuple + The result containing: + + * values - The unique elements of an input array. + * indices - The first occurring indices for each unique element. + * inverse_indices - The indices from the set of unique elements + that reconstruct `x`. + * counts - The corresponding counts for each unique element. + + See Also + -------- + unique : Find the unique elements of an array. + + """ + result = unique( + x, + return_index=True, + return_inverse=True, + return_counts=True, + equal_nan=False + ) + return UniqueAllResult(*result) + + +def _unique_counts_dispatcher(x, /): + return (x,) + + +@array_function_dispatch(_unique_counts_dispatcher) +def unique_counts(x): + """ + Find the unique elements and counts of an input array `x`. + + This function is an Array API compatible alternative to: + + >>> x = np.array([1, 1, 2]) + >>> np.unique(x, return_counts=True, equal_nan=False) + (array([1, 2]), array([2, 1])) + + Parameters + ---------- + x : array_like + Input array. It will be flattened if it is not already 1-D. + + Returns + ------- + out : namedtuple + The result containing: + + * values - The unique elements of an input array. + * counts - The corresponding counts for each unique element. + + See Also + -------- + unique : Find the unique elements of an array. + + """ + result = unique( + x, + return_index=False, + return_inverse=False, + return_counts=True, + equal_nan=False + ) + return UniqueCountsResult(*result) + + +def _unique_inverse_dispatcher(x, /): + return (x,) + + +@array_function_dispatch(_unique_inverse_dispatcher) +def unique_inverse(x): + """ + Find the unique elements of `x` and indices to reconstruct `x`. + + This function is Array API compatible alternative to: + + >>> x = np.array([1, 1, 2]) + >>> np.unique(x, return_inverse=True, equal_nan=False) + (array([1, 2]), array([0, 0, 1])) + + Parameters + ---------- + x : array_like + Input array. It will be flattened if it is not already 1-D. + + Returns + ------- + out : namedtuple + The result containing: + + * values - The unique elements of an input array. + * inverse_indices - The indices from the set of unique elements + that reconstruct `x`. + + See Also + -------- + unique : Find the unique elements of an array. + + """ + result = unique( + x, + return_index=False, + return_inverse=True, + return_counts=False, + equal_nan=False + ) + return UniqueInverseResult(*result) + + +def _unique_values_dispatcher(x, /): + return (x,) + + +@array_function_dispatch(_unique_values_dispatcher) +def unique_values(x): + """ + Returns the unique elements of an input array `x`. + + This function is Array API compatible alternative to: + + >>> x = np.array([1, 1, 2]) + >>> np.unique(x, equal_nan=False) + array([1, 2]) + + Parameters + ---------- + x : array_like + Input array. It will be flattened if it is not already 1-D. + + Returns + ------- + out : ndarray + The unique elements of an input array. + + See Also + -------- + unique : Find the unique elements of an array. + + """ + return unique( + x, + return_index=False, + return_inverse=False, + return_counts=False, + equal_nan=False + ) + + +def _intersect1d_dispatcher( + ar1, ar2, assume_unique=None, return_indices=None): + return (ar1, ar2) + + +@array_function_dispatch(_intersect1d_dispatcher) +def intersect1d(ar1, ar2, assume_unique=False, return_indices=False): + """ + Find the intersection of two arrays. + + Return the sorted, unique values that are in both of the input arrays. + + Parameters + ---------- + ar1, ar2 : array_like + Input arrays. Will be flattened if not already 1D. + assume_unique : bool + If True, the input arrays are both assumed to be unique, which + can speed up the calculation. If True but ``ar1`` or ``ar2`` are not + unique, incorrect results and out-of-bounds indices could result. + Default is False. + return_indices : bool + If True, the indices which correspond to the intersection of the two + arrays are returned. The first instance of a value is used if there are + multiple. Default is False. + + .. versionadded:: 1.15.0 + + Returns + ------- + intersect1d : ndarray + Sorted 1D array of common and unique elements. + comm1 : ndarray + The indices of the first occurrences of the common values in `ar1`. + Only provided if `return_indices` is True. + comm2 : ndarray + The indices of the first occurrences of the common values in `ar2`. + Only provided if `return_indices` is True. + + Examples + -------- + >>> np.intersect1d([1, 3, 4, 3], [3, 1, 2, 1]) + array([1, 3]) + + To intersect more than two arrays, use functools.reduce: + + >>> from functools import reduce + >>> reduce(np.intersect1d, ([1, 3, 4, 3], [3, 1, 2, 1], [6, 3, 4, 2])) + array([3]) + + To return the indices of the values common to the input arrays + along with the intersected values: + + >>> x = np.array([1, 1, 2, 3, 4]) + >>> y = np.array([2, 1, 4, 6]) + >>> xy, x_ind, y_ind = np.intersect1d(x, y, return_indices=True) + >>> x_ind, y_ind + (array([0, 2, 4]), array([1, 0, 2])) + >>> xy, x[x_ind], y[y_ind] + (array([1, 2, 4]), array([1, 2, 4]), array([1, 2, 4])) + + """ + ar1 = np.asanyarray(ar1) + ar2 = np.asanyarray(ar2) + + if not assume_unique: + if return_indices: + ar1, ind1 = unique(ar1, return_index=True) + ar2, ind2 = unique(ar2, return_index=True) + else: + ar1 = unique(ar1) + ar2 = unique(ar2) + else: + ar1 = ar1.ravel() + ar2 = ar2.ravel() + + aux = np.concatenate((ar1, ar2)) + if return_indices: + aux_sort_indices = np.argsort(aux, kind='mergesort') + aux = aux[aux_sort_indices] + else: + aux.sort() + + mask = aux[1:] == aux[:-1] + int1d = aux[:-1][mask] + + if return_indices: + ar1_indices = aux_sort_indices[:-1][mask] + ar2_indices = aux_sort_indices[1:][mask] - ar1.size + if not assume_unique: + ar1_indices = ind1[ar1_indices] + ar2_indices = ind2[ar2_indices] + + return int1d, ar1_indices, ar2_indices + else: + return int1d + + +def _setxor1d_dispatcher(ar1, ar2, assume_unique=None): + return (ar1, ar2) + + +@array_function_dispatch(_setxor1d_dispatcher) +def setxor1d(ar1, ar2, assume_unique=False): + """ + Find the set exclusive-or of two arrays. + + Return the sorted, unique values that are in only one (not both) of the + input arrays. + + Parameters + ---------- + ar1, ar2 : array_like + Input arrays. + assume_unique : bool + If True, the input arrays are both assumed to be unique, which + can speed up the calculation. Default is False. + + Returns + ------- + setxor1d : ndarray + Sorted 1D array of unique values that are in only one of the input + arrays. + + Examples + -------- + >>> a = np.array([1, 2, 3, 2, 4]) + >>> b = np.array([2, 3, 5, 7, 5]) + >>> np.setxor1d(a,b) + array([1, 4, 5, 7]) + + """ + if not assume_unique: + ar1 = unique(ar1) + ar2 = unique(ar2) + + aux = np.concatenate((ar1, ar2)) + if aux.size == 0: + return aux + + aux.sort() + flag = np.concatenate(([True], aux[1:] != aux[:-1], [True])) + return aux[flag[1:] & flag[:-1]] + + +def _in1d_dispatcher(ar1, ar2, assume_unique=None, invert=None, *, + kind=None): + return (ar1, ar2) + + +@array_function_dispatch(_in1d_dispatcher) +def in1d(ar1, ar2, assume_unique=False, invert=False, *, kind=None): + """ + Test whether each element of a 1-D array is also present in a second array. + + .. deprecated:: 2.0 + Use :func:`isin` instead of `in1d` for new code. + + Returns a boolean array the same length as `ar1` that is True + where an element of `ar1` is in `ar2` and False otherwise. + + Parameters + ---------- + ar1 : (M,) array_like + Input array. + ar2 : array_like + The values against which to test each value of `ar1`. + assume_unique : bool, optional + If True, the input arrays are both assumed to be unique, which + can speed up the calculation. Default is False. + invert : bool, optional + If True, the values in the returned array are inverted (that is, + False where an element of `ar1` is in `ar2` and True otherwise). + Default is False. ``np.in1d(a, b, invert=True)`` is equivalent + to (but is faster than) ``np.invert(in1d(a, b))``. + kind : {None, 'sort', 'table'}, optional + The algorithm to use. This will not affect the final result, + but will affect the speed and memory use. The default, None, + will select automatically based on memory considerations. + + * If 'sort', will use a mergesort-based approach. This will have + a memory usage of roughly 6 times the sum of the sizes of + `ar1` and `ar2`, not accounting for size of dtypes. + * If 'table', will use a lookup table approach similar + to a counting sort. This is only available for boolean and + integer arrays. This will have a memory usage of the + size of `ar1` plus the max-min value of `ar2`. `assume_unique` + has no effect when the 'table' option is used. + * If None, will automatically choose 'table' if + the required memory allocation is less than or equal to + 6 times the sum of the sizes of `ar1` and `ar2`, + otherwise will use 'sort'. This is done to not use + a large amount of memory by default, even though + 'table' may be faster in most cases. If 'table' is chosen, + `assume_unique` will have no effect. + + .. versionadded:: 1.8.0 + + Returns + ------- + in1d : (M,) ndarray, bool + The values `ar1[in1d]` are in `ar2`. + + See Also + -------- + isin : Version of this function that preserves the + shape of ar1. + + Notes + ----- + `in1d` can be considered as an element-wise function version of the + python keyword `in`, for 1-D sequences. ``in1d(a, b)`` is roughly + equivalent to ``np.array([item in b for item in a])``. + However, this idea fails if `ar2` is a set, or similar (non-sequence) + container: As ``ar2`` is converted to an array, in those cases + ``asarray(ar2)`` is an object array rather than the expected array of + contained values. + + Using ``kind='table'`` tends to be faster than `kind='sort'` if the + following relationship is true: + ``log10(len(ar2)) > (log10(max(ar2)-min(ar2)) - 2.27) / 0.927``, + but may use greater memory. The default value for `kind` will + be automatically selected based only on memory usage, so one may + manually set ``kind='table'`` if memory constraints can be relaxed. + + .. versionadded:: 1.4.0 + + Examples + -------- + >>> test = np.array([0, 1, 2, 5, 0]) + >>> states = [0, 2] + >>> mask = np.in1d(test, states) + >>> mask + array([ True, False, True, False, True]) + >>> test[mask] + array([0, 2, 0]) + >>> mask = np.in1d(test, states, invert=True) + >>> mask + array([False, True, False, True, False]) + >>> test[mask] + array([1, 5]) + """ + + # Deprecated in NumPy 2.0, 2023-08-18 + warnings.warn( + "`in1d` is deprecated. Use `np.isin` instead.", + DeprecationWarning, + stacklevel=2 + ) + + return _in1d(ar1, ar2, assume_unique, invert, kind=kind) + + +def _in1d(ar1, ar2, assume_unique=False, invert=False, *, kind=None): + # Ravel both arrays, behavior for the first array could be different + ar1 = np.asarray(ar1).ravel() + ar2 = np.asarray(ar2).ravel() + + # Ensure that iteration through object arrays yields size-1 arrays + if ar2.dtype == object: + ar2 = ar2.reshape(-1, 1) + + if kind not in {None, 'sort', 'table'}: + raise ValueError( + f"Invalid kind: '{kind}'. Please use None, 'sort' or 'table'.") + + # Can use the table method if all arrays are integers or boolean: + is_int_arrays = all(ar.dtype.kind in ("u", "i", "b") for ar in (ar1, ar2)) + use_table_method = is_int_arrays and kind in {None, 'table'} + + if use_table_method: + if ar2.size == 0: + if invert: + return np.ones_like(ar1, dtype=bool) + else: + return np.zeros_like(ar1, dtype=bool) + + # Convert booleans to uint8 so we can use the fast integer algorithm + if ar1.dtype == bool: + ar1 = ar1.astype(np.uint8) + if ar2.dtype == bool: + ar2 = ar2.astype(np.uint8) + + ar2_min = int(np.min(ar2)) + ar2_max = int(np.max(ar2)) + + ar2_range = ar2_max - ar2_min + + # Constraints on whether we can actually use the table method: + # 1. Assert memory usage is not too large + below_memory_constraint = ar2_range <= 6 * (ar1.size + ar2.size) + # 2. Check overflows for (ar2 - ar2_min); dtype=ar2.dtype + range_safe_from_overflow = ar2_range <= np.iinfo(ar2.dtype).max + + # Optimal performance is for approximately + # log10(size) > (log10(range) - 2.27) / 0.927. + # However, here we set the requirement that by default + # the intermediate array can only be 6x + # the combined memory allocation of the original + # arrays. See discussion on + # https://github.com/numpy/numpy/pull/12065. + + if ( + range_safe_from_overflow and + (below_memory_constraint or kind == 'table') + ): + + if invert: + outgoing_array = np.ones_like(ar1, dtype=bool) + else: + outgoing_array = np.zeros_like(ar1, dtype=bool) + + # Make elements 1 where the integer exists in ar2 + if invert: + isin_helper_ar = np.ones(ar2_range + 1, dtype=bool) + isin_helper_ar[ar2 - ar2_min] = 0 + else: + isin_helper_ar = np.zeros(ar2_range + 1, dtype=bool) + isin_helper_ar[ar2 - ar2_min] = 1 + + # Mask out elements we know won't work + basic_mask = (ar1 <= ar2_max) & (ar1 >= ar2_min) + in_range_ar1 = ar1[basic_mask] + if in_range_ar1.size == 0: + # Nothing more to do, since all values are out of range. + return outgoing_array + + # Unfortunately, ar2_min can be out of range for `intp` even + # if the calculation result must fit in range (and be positive). + # In that case, use ar2.dtype which must work for all unmasked + # values. + try: + ar2_min = np.array(ar2_min, dtype=np.intp) + dtype = np.intp + except OverflowError: + dtype = ar2.dtype + + out = np.empty_like(in_range_ar1, dtype=np.intp) + outgoing_array[basic_mask] = isin_helper_ar[ + np.subtract(in_range_ar1, ar2_min, dtype=dtype, + out=out, casting="unsafe")] + + return outgoing_array + elif kind == 'table': # not range_safe_from_overflow + raise RuntimeError( + "You have specified kind='table', " + "but the range of values in `ar2` or `ar1` exceed the " + "maximum integer of the datatype. " + "Please set `kind` to None or 'sort'." + ) + elif kind == 'table': + raise ValueError( + "The 'table' method is only " + "supported for boolean or integer arrays. " + "Please select 'sort' or None for kind." + ) + + + # Check if one of the arrays may contain arbitrary objects + contains_object = ar1.dtype.hasobject or ar2.dtype.hasobject + + # This code is run when + # a) the first condition is true, making the code significantly faster + # b) the second condition is true (i.e. `ar1` or `ar2` may contain + # arbitrary objects), since then sorting is not guaranteed to work + if len(ar2) < 10 * len(ar1) ** 0.145 or contains_object: + if invert: + mask = np.ones(len(ar1), dtype=bool) + for a in ar2: + mask &= (ar1 != a) + else: + mask = np.zeros(len(ar1), dtype=bool) + for a in ar2: + mask |= (ar1 == a) + return mask + + # Otherwise use sorting + if not assume_unique: + ar1, rev_idx = np.unique(ar1, return_inverse=True) + ar2 = np.unique(ar2) + + ar = np.concatenate((ar1, ar2)) + # We need this to be a stable sort, so always use 'mergesort' + # here. The values from the first array should always come before + # the values from the second array. + order = ar.argsort(kind='mergesort') + sar = ar[order] + if invert: + bool_ar = (sar[1:] != sar[:-1]) + else: + bool_ar = (sar[1:] == sar[:-1]) + flag = np.concatenate((bool_ar, [invert])) + ret = np.empty(ar.shape, dtype=bool) + ret[order] = flag + + if assume_unique: + return ret[:len(ar1)] + else: + return ret[rev_idx] + + +def _isin_dispatcher(element, test_elements, assume_unique=None, invert=None, + *, kind=None): + return (element, test_elements) + + +@array_function_dispatch(_isin_dispatcher) +def isin(element, test_elements, assume_unique=False, invert=False, *, + kind=None): + """ + Calculates ``element in test_elements``, broadcasting over `element` only. + Returns a boolean array of the same shape as `element` that is True + where an element of `element` is in `test_elements` and False otherwise. + + Parameters + ---------- + element : array_like + Input array. + test_elements : array_like + The values against which to test each value of `element`. + This argument is flattened if it is an array or array_like. + See notes for behavior with non-array-like parameters. + assume_unique : bool, optional + If True, the input arrays are both assumed to be unique, which + can speed up the calculation. Default is False. + invert : bool, optional + If True, the values in the returned array are inverted, as if + calculating `element not in test_elements`. Default is False. + ``np.isin(a, b, invert=True)`` is equivalent to (but faster + than) ``np.invert(np.isin(a, b))``. + kind : {None, 'sort', 'table'}, optional + The algorithm to use. This will not affect the final result, + but will affect the speed and memory use. The default, None, + will select automatically based on memory considerations. + + * If 'sort', will use a mergesort-based approach. This will have + a memory usage of roughly 6 times the sum of the sizes of + `element` and `test_elements`, not accounting for size of dtypes. + * If 'table', will use a lookup table approach similar + to a counting sort. This is only available for boolean and + integer arrays. This will have a memory usage of the + size of `element` plus the max-min value of `test_elements`. + `assume_unique` has no effect when the 'table' option is used. + * If None, will automatically choose 'table' if + the required memory allocation is less than or equal to + 6 times the sum of the sizes of `element` and `test_elements`, + otherwise will use 'sort'. This is done to not use + a large amount of memory by default, even though + 'table' may be faster in most cases. If 'table' is chosen, + `assume_unique` will have no effect. + + + Returns + ------- + isin : ndarray, bool + Has the same shape as `element`. The values `element[isin]` + are in `test_elements`. + + Notes + ----- + + `isin` is an element-wise function version of the python keyword `in`. + ``isin(a, b)`` is roughly equivalent to + ``np.array([item in b for item in a])`` if `a` and `b` are 1-D sequences. + + `element` and `test_elements` are converted to arrays if they are not + already. If `test_elements` is a set (or other non-sequence collection) + it will be converted to an object array with one element, rather than an + array of the values contained in `test_elements`. This is a consequence + of the `array` constructor's way of handling non-sequence collections. + Converting the set to a list usually gives the desired behavior. + + Using ``kind='table'`` tends to be faster than `kind='sort'` if the + following relationship is true: + ``log10(len(test_elements)) > + (log10(max(test_elements)-min(test_elements)) - 2.27) / 0.927``, + but may use greater memory. The default value for `kind` will + be automatically selected based only on memory usage, so one may + manually set ``kind='table'`` if memory constraints can be relaxed. + + .. versionadded:: 1.13.0 + + Examples + -------- + >>> element = 2*np.arange(4).reshape((2, 2)) + >>> element + array([[0, 2], + [4, 6]]) + >>> test_elements = [1, 2, 4, 8] + >>> mask = np.isin(element, test_elements) + >>> mask + array([[False, True], + [ True, False]]) + >>> element[mask] + array([2, 4]) + + The indices of the matched values can be obtained with `nonzero`: + + >>> np.nonzero(mask) + (array([0, 1]), array([1, 0])) + + The test can also be inverted: + + >>> mask = np.isin(element, test_elements, invert=True) + >>> mask + array([[ True, False], + [False, True]]) + >>> element[mask] + array([0, 6]) + + Because of how `array` handles sets, the following does not + work as expected: + + >>> test_set = {1, 2, 4, 8} + >>> np.isin(element, test_set) + array([[False, False], + [False, False]]) + + Casting the set to a list gives the expected result: + + >>> np.isin(element, list(test_set)) + array([[False, True], + [ True, False]]) + """ + element = np.asarray(element) + return _in1d(element, test_elements, assume_unique=assume_unique, + invert=invert, kind=kind).reshape(element.shape) + + +def _union1d_dispatcher(ar1, ar2): + return (ar1, ar2) + + +@array_function_dispatch(_union1d_dispatcher) +def union1d(ar1, ar2): + """ + Find the union of two arrays. + + Return the unique, sorted array of values that are in either of the two + input arrays. + + Parameters + ---------- + ar1, ar2 : array_like + Input arrays. They are flattened if they are not already 1D. + + Returns + ------- + union1d : ndarray + Unique, sorted union of the input arrays. + + Examples + -------- + >>> np.union1d([-1, 0, 1], [-2, 0, 2]) + array([-2, -1, 0, 1, 2]) + + To find the union of more than two arrays, use functools.reduce: + + >>> from functools import reduce + >>> reduce(np.union1d, ([1, 3, 4, 3], [3, 1, 2, 1], [6, 3, 4, 2])) + array([1, 2, 3, 4, 6]) + """ + return unique(np.concatenate((ar1, ar2), axis=None)) + + +def _setdiff1d_dispatcher(ar1, ar2, assume_unique=None): + return (ar1, ar2) + + +@array_function_dispatch(_setdiff1d_dispatcher) +def setdiff1d(ar1, ar2, assume_unique=False): + """ + Find the set difference of two arrays. + + Return the unique values in `ar1` that are not in `ar2`. + + Parameters + ---------- + ar1 : array_like + Input array. + ar2 : array_like + Input comparison array. + assume_unique : bool + If True, the input arrays are both assumed to be unique, which + can speed up the calculation. Default is False. + + Returns + ------- + setdiff1d : ndarray + 1D array of values in `ar1` that are not in `ar2`. The result + is sorted when `assume_unique=False`, but otherwise only sorted + if the input is sorted. + + Examples + -------- + >>> a = np.array([1, 2, 3, 2, 4, 1]) + >>> b = np.array([3, 4, 5, 6]) + >>> np.setdiff1d(a, b) + array([1, 2]) + + """ + if assume_unique: + ar1 = np.asarray(ar1).ravel() + else: + ar1 = unique(ar1) + ar2 = unique(ar2) + return ar1[_in1d(ar1, ar2, assume_unique=True, invert=True)] diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_arraysetops_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_arraysetops_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..95498248f21a90d923e0d2f4a5e511b3a9bbbea2 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_arraysetops_impl.pyi @@ -0,0 +1,399 @@ +from typing import ( + Any, + Generic, + Literal as L, + NamedTuple, + overload, + SupportsIndex, + TypeVar, +) + +import numpy as np +from numpy import ( + generic, + number, + ushort, + ubyte, + uintc, + uint, + ulonglong, + short, + int8, + byte, + intc, + int_, + intp, + longlong, + half, + single, + double, + longdouble, + csingle, + cdouble, + clongdouble, + timedelta64, + datetime64, + object_, + str_, + bytes_, + void, +) + +from numpy._typing import ( + ArrayLike, + NDArray, + _ArrayLike, + _ArrayLikeBool_co, + _ArrayLikeDT64_co, + _ArrayLikeTD64_co, + _ArrayLikeObject_co, + _ArrayLikeNumber_co, +) + +_SCT = TypeVar("_SCT", bound=generic) +_NumberType = TypeVar("_NumberType", bound=number[Any]) + +# Explicitly set all allowed values to prevent accidental castings to +# abstract dtypes (their common super-type). +# +# Only relevant if two or more arguments are parametrized, (e.g. `setdiff1d`) +# which could result in, for example, `int64` and `float64`producing a +# `number[_64Bit]` array +_SCTNoCast = TypeVar( + "_SCTNoCast", + np.bool, + ushort, + ubyte, + uintc, + uint, + ulonglong, + short, + byte, + intc, + int_, + longlong, + half, + single, + double, + longdouble, + csingle, + cdouble, + clongdouble, + timedelta64, + datetime64, + object_, + str_, + bytes_, + void, +) + +class UniqueAllResult(NamedTuple, Generic[_SCT]): + values: NDArray[_SCT] + indices: NDArray[intp] + inverse_indices: NDArray[intp] + counts: NDArray[intp] + +class UniqueCountsResult(NamedTuple, Generic[_SCT]): + values: NDArray[_SCT] + counts: NDArray[intp] + +class UniqueInverseResult(NamedTuple, Generic[_SCT]): + values: NDArray[_SCT] + inverse_indices: NDArray[intp] + +__all__: list[str] + +@overload +def ediff1d( + ary: _ArrayLikeBool_co, + to_end: None | ArrayLike = ..., + to_begin: None | ArrayLike = ..., +) -> NDArray[int8]: ... +@overload +def ediff1d( + ary: _ArrayLike[_NumberType], + to_end: None | ArrayLike = ..., + to_begin: None | ArrayLike = ..., +) -> NDArray[_NumberType]: ... +@overload +def ediff1d( + ary: _ArrayLikeNumber_co, + to_end: None | ArrayLike = ..., + to_begin: None | ArrayLike = ..., +) -> NDArray[Any]: ... +@overload +def ediff1d( + ary: _ArrayLikeDT64_co | _ArrayLikeTD64_co, + to_end: None | ArrayLike = ..., + to_begin: None | ArrayLike = ..., +) -> NDArray[timedelta64]: ... +@overload +def ediff1d( + ary: _ArrayLikeObject_co, + to_end: None | ArrayLike = ..., + to_begin: None | ArrayLike = ..., +) -> NDArray[object_]: ... + +@overload +def unique( + ar: _ArrayLike[_SCT], + return_index: L[False] = ..., + return_inverse: L[False] = ..., + return_counts: L[False] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> NDArray[_SCT]: ... +@overload +def unique( + ar: ArrayLike, + return_index: L[False] = ..., + return_inverse: L[False] = ..., + return_counts: L[False] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> NDArray[Any]: ... +@overload +def unique( + ar: _ArrayLike[_SCT], + return_index: L[True] = ..., + return_inverse: L[False] = ..., + return_counts: L[False] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[_SCT], NDArray[intp]]: ... +@overload +def unique( + ar: ArrayLike, + return_index: L[True] = ..., + return_inverse: L[False] = ..., + return_counts: L[False] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[Any], NDArray[intp]]: ... +@overload +def unique( + ar: _ArrayLike[_SCT], + return_index: L[False] = ..., + return_inverse: L[True] = ..., + return_counts: L[False] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[_SCT], NDArray[intp]]: ... +@overload +def unique( + ar: ArrayLike, + return_index: L[False] = ..., + return_inverse: L[True] = ..., + return_counts: L[False] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[Any], NDArray[intp]]: ... +@overload +def unique( + ar: _ArrayLike[_SCT], + return_index: L[False] = ..., + return_inverse: L[False] = ..., + return_counts: L[True] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[_SCT], NDArray[intp]]: ... +@overload +def unique( + ar: ArrayLike, + return_index: L[False] = ..., + return_inverse: L[False] = ..., + return_counts: L[True] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[Any], NDArray[intp]]: ... +@overload +def unique( + ar: _ArrayLike[_SCT], + return_index: L[True] = ..., + return_inverse: L[True] = ..., + return_counts: L[False] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[_SCT], NDArray[intp], NDArray[intp]]: ... +@overload +def unique( + ar: ArrayLike, + return_index: L[True] = ..., + return_inverse: L[True] = ..., + return_counts: L[False] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[Any], NDArray[intp], NDArray[intp]]: ... +@overload +def unique( + ar: _ArrayLike[_SCT], + return_index: L[True] = ..., + return_inverse: L[False] = ..., + return_counts: L[True] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[_SCT], NDArray[intp], NDArray[intp]]: ... +@overload +def unique( + ar: ArrayLike, + return_index: L[True] = ..., + return_inverse: L[False] = ..., + return_counts: L[True] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[Any], NDArray[intp], NDArray[intp]]: ... +@overload +def unique( + ar: _ArrayLike[_SCT], + return_index: L[False] = ..., + return_inverse: L[True] = ..., + return_counts: L[True] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[_SCT], NDArray[intp], NDArray[intp]]: ... +@overload +def unique( + ar: ArrayLike, + return_index: L[False] = ..., + return_inverse: L[True] = ..., + return_counts: L[True] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[Any], NDArray[intp], NDArray[intp]]: ... +@overload +def unique( + ar: _ArrayLike[_SCT], + return_index: L[True] = ..., + return_inverse: L[True] = ..., + return_counts: L[True] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[_SCT], NDArray[intp], NDArray[intp], NDArray[intp]]: ... +@overload +def unique( + ar: ArrayLike, + return_index: L[True] = ..., + return_inverse: L[True] = ..., + return_counts: L[True] = ..., + axis: None | SupportsIndex = ..., + *, + equal_nan: bool = ..., +) -> tuple[NDArray[Any], NDArray[intp], NDArray[intp], NDArray[intp]]: ... + +@overload +def unique_all( + x: _ArrayLike[_SCT], / +) -> UniqueAllResult[_SCT]: ... +@overload +def unique_all( + x: ArrayLike, / +) -> UniqueAllResult[Any]: ... + +@overload +def unique_counts( + x: _ArrayLike[_SCT], / +) -> UniqueCountsResult[_SCT]: ... +@overload +def unique_counts( + x: ArrayLike, / +) -> UniqueCountsResult[Any]: ... + +@overload +def unique_inverse(x: _ArrayLike[_SCT], /) -> UniqueInverseResult[_SCT]: ... +@overload +def unique_inverse(x: ArrayLike, /) -> UniqueInverseResult[Any]: ... + +@overload +def unique_values(x: _ArrayLike[_SCT], /) -> NDArray[_SCT]: ... +@overload +def unique_values(x: ArrayLike, /) -> NDArray[Any]: ... + +@overload +def intersect1d( + ar1: _ArrayLike[_SCTNoCast], + ar2: _ArrayLike[_SCTNoCast], + assume_unique: bool = ..., + return_indices: L[False] = ..., +) -> NDArray[_SCTNoCast]: ... +@overload +def intersect1d( + ar1: ArrayLike, + ar2: ArrayLike, + assume_unique: bool = ..., + return_indices: L[False] = ..., +) -> NDArray[Any]: ... +@overload +def intersect1d( + ar1: _ArrayLike[_SCTNoCast], + ar2: _ArrayLike[_SCTNoCast], + assume_unique: bool = ..., + return_indices: L[True] = ..., +) -> tuple[NDArray[_SCTNoCast], NDArray[intp], NDArray[intp]]: ... +@overload +def intersect1d( + ar1: ArrayLike, + ar2: ArrayLike, + assume_unique: bool = ..., + return_indices: L[True] = ..., +) -> tuple[NDArray[Any], NDArray[intp], NDArray[intp]]: ... + +@overload +def setxor1d( + ar1: _ArrayLike[_SCTNoCast], + ar2: _ArrayLike[_SCTNoCast], + assume_unique: bool = ..., +) -> NDArray[_SCTNoCast]: ... +@overload +def setxor1d( + ar1: ArrayLike, + ar2: ArrayLike, + assume_unique: bool = ..., +) -> NDArray[Any]: ... + +def isin( + element: ArrayLike, + test_elements: ArrayLike, + assume_unique: bool = ..., + invert: bool = ..., + *, + kind: None | str = ..., +) -> NDArray[np.bool]: ... + +@overload +def union1d( + ar1: _ArrayLike[_SCTNoCast], + ar2: _ArrayLike[_SCTNoCast], +) -> NDArray[_SCTNoCast]: ... +@overload +def union1d( + ar1: ArrayLike, + ar2: ArrayLike, +) -> NDArray[Any]: ... + +@overload +def setdiff1d( + ar1: _ArrayLike[_SCTNoCast], + ar2: _ArrayLike[_SCTNoCast], + assume_unique: bool = ..., +) -> NDArray[_SCTNoCast]: ... +@overload +def setdiff1d( + ar1: ArrayLike, + ar2: ArrayLike, + assume_unique: bool = ..., +) -> NDArray[Any]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_arrayterator_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_arrayterator_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..8b21a608663849a4029b8a2195b8ce2bbbd90207 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_arrayterator_impl.py @@ -0,0 +1,221 @@ +""" +A buffered iterator for big arrays. + +This module solves the problem of iterating over a big file-based array +without having to read it into memory. The `Arrayterator` class wraps +an array object, and when iterated it will return sub-arrays with at most +a user-specified number of elements. + +""" +from operator import mul +from functools import reduce + +__all__ = ['Arrayterator'] + + +class Arrayterator: + """ + Buffered iterator for big arrays. + + `Arrayterator` creates a buffered iterator for reading big arrays in small + contiguous blocks. The class is useful for objects stored in the + file system. It allows iteration over the object *without* reading + everything in memory; instead, small blocks are read and iterated over. + + `Arrayterator` can be used with any object that supports multidimensional + slices. This includes NumPy arrays, but also variables from + Scientific.IO.NetCDF or pynetcdf for example. + + Parameters + ---------- + var : array_like + The object to iterate over. + buf_size : int, optional + The buffer size. If `buf_size` is supplied, the maximum amount of + data that will be read into memory is `buf_size` elements. + Default is None, which will read as many element as possible + into memory. + + Attributes + ---------- + var + buf_size + start + stop + step + shape + flat + + See Also + -------- + numpy.ndenumerate : Multidimensional array iterator. + numpy.flatiter : Flat array iterator. + numpy.memmap : Create a memory-map to an array stored + in a binary file on disk. + + Notes + ----- + The algorithm works by first finding a "running dimension", along which + the blocks will be extracted. Given an array of dimensions + ``(d1, d2, ..., dn)``, e.g. if `buf_size` is smaller than ``d1``, the + first dimension will be used. If, on the other hand, + ``d1 < buf_size < d1*d2`` the second dimension will be used, and so on. + Blocks are extracted along this dimension, and when the last block is + returned the process continues from the next dimension, until all + elements have been read. + + Examples + -------- + >>> a = np.arange(3 * 4 * 5 * 6).reshape(3, 4, 5, 6) + >>> a_itor = np.lib.Arrayterator(a, 2) + >>> a_itor.shape + (3, 4, 5, 6) + + Now we can iterate over ``a_itor``, and it will return arrays of size + two. Since `buf_size` was smaller than any dimension, the first + dimension will be iterated over first: + + >>> for subarr in a_itor: + ... if not subarr.all(): + ... print(subarr, subarr.shape) # doctest: +SKIP + >>> # [[[[0 1]]]] (1, 1, 1, 2) + + """ + + def __init__(self, var, buf_size=None): + self.var = var + self.buf_size = buf_size + + self.start = [0 for dim in var.shape] + self.stop = [dim for dim in var.shape] + self.step = [1 for dim in var.shape] + + def __getattr__(self, attr): + return getattr(self.var, attr) + + def __getitem__(self, index): + """ + Return a new arrayterator. + + """ + # Fix index, handling ellipsis and incomplete slices. + if not isinstance(index, tuple): + index = (index,) + fixed = [] + length, dims = len(index), self.ndim + for slice_ in index: + if slice_ is Ellipsis: + fixed.extend([slice(None)] * (dims-length+1)) + length = len(fixed) + elif isinstance(slice_, int): + fixed.append(slice(slice_, slice_+1, 1)) + else: + fixed.append(slice_) + index = tuple(fixed) + if len(index) < dims: + index += (slice(None),) * (dims-len(index)) + + # Return a new arrayterator object. + out = self.__class__(self.var, self.buf_size) + for i, (start, stop, step, slice_) in enumerate( + zip(self.start, self.stop, self.step, index)): + out.start[i] = start + (slice_.start or 0) + out.step[i] = step * (slice_.step or 1) + out.stop[i] = start + (slice_.stop or stop-start) + out.stop[i] = min(stop, out.stop[i]) + return out + + def __array__(self, dtype=None, copy=None): + """ + Return corresponding data. + + """ + slice_ = tuple(slice(*t) for t in zip( + self.start, self.stop, self.step)) + return self.var[slice_] + + @property + def flat(self): + """ + A 1-D flat iterator for Arrayterator objects. + + This iterator returns elements of the array to be iterated over in + `~lib.Arrayterator` one by one. + It is similar to `flatiter`. + + See Also + -------- + lib.Arrayterator + flatiter + + Examples + -------- + >>> a = np.arange(3 * 4 * 5 * 6).reshape(3, 4, 5, 6) + >>> a_itor = np.lib.Arrayterator(a, 2) + + >>> for subarr in a_itor.flat: + ... if not subarr: + ... print(subarr, type(subarr)) + ... + 0 + + """ + for block in self: + yield from block.flat + + @property + def shape(self): + """ + The shape of the array to be iterated over. + + For an example, see `Arrayterator`. + + """ + return tuple(((stop-start-1)//step+1) for start, stop, step in + zip(self.start, self.stop, self.step)) + + def __iter__(self): + # Skip arrays with degenerate dimensions + if [dim for dim in self.shape if dim <= 0]: + return + + start = self.start[:] + stop = self.stop[:] + step = self.step[:] + ndims = self.var.ndim + + while True: + count = self.buf_size or reduce(mul, self.shape) + + # iterate over each dimension, looking for the + # running dimension (ie, the dimension along which + # the blocks will be built from) + rundim = 0 + for i in range(ndims-1, -1, -1): + # if count is zero we ran out of elements to read + # along higher dimensions, so we read only a single position + if count == 0: + stop[i] = start[i]+1 + elif count <= self.shape[i]: + # limit along this dimension + stop[i] = start[i] + count*step[i] + rundim = i + else: + # read everything along this dimension + stop[i] = self.stop[i] + stop[i] = min(self.stop[i], stop[i]) + count = count//self.shape[i] + + # yield a block + slice_ = tuple(slice(*t) for t in zip(start, stop, step)) + yield self.var[slice_] + + # Update start position, taking care of overflow to + # other dimensions + start[rundim] = stop[rundim] # start where we stopped + for i in range(ndims-1, 0, -1): + if start[i] >= self.stop[i]: + start[i] = self.start[i] + start[i-1] += self.step[i-1] + if start[0] >= self.stop[0]: + return diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_arrayterator_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_arrayterator_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..fb9c42dd2bbe8d3fa8f62fe705fc7a4fc7fe1e26 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_arrayterator_impl.pyi @@ -0,0 +1,48 @@ +from collections.abc import Generator +from typing import ( + Any, + TypeVar, + overload, +) + +from numpy import ndarray, dtype, generic +from numpy._typing import DTypeLike, NDArray + +# TODO: Set a shape bound once we've got proper shape support +_Shape = TypeVar("_Shape", bound=Any) +_DType = TypeVar("_DType", bound=dtype[Any]) +_ScalarType = TypeVar("_ScalarType", bound=generic) + +_Index = ( + ellipsis + | int + | slice + | tuple[ellipsis | int | slice, ...] +) + +__all__: list[str] + +# NOTE: In reality `Arrayterator` does not actually inherit from `ndarray`, +# but its ``__getattr__` method does wrap around the former and thus has +# access to all its methods + +class Arrayterator(ndarray[_Shape, _DType]): + var: ndarray[_Shape, _DType] # type: ignore[assignment] + buf_size: None | int + start: list[int] + stop: list[int] + step: list[int] + + @property # type: ignore[misc] + def shape(self) -> tuple[int, ...]: ... + @property + def flat(self: NDArray[_ScalarType]) -> Generator[_ScalarType, None, None]: ... + def __init__( + self, var: ndarray[_Shape, _DType], buf_size: None | int = ... + ) -> None: ... + @overload + def __array__(self, dtype: None = ..., copy: None | bool = ...) -> ndarray[Any, _DType]: ... + @overload + def __array__(self, dtype: DTypeLike, copy: None | bool = ...) -> NDArray[Any]: ... + def __getitem__(self, index: _Index) -> Arrayterator[Any, _DType]: ... + def __iter__(self) -> Generator[ndarray[Any, _DType], None, None]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_datasource.py b/venv/lib/python3.12/site-packages/numpy/lib/_datasource.py new file mode 100644 index 0000000000000000000000000000000000000000..9b455513ac89b6d49f2304132cd6fa8d39c968e5 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_datasource.py @@ -0,0 +1,703 @@ +"""A file interface for handling local and remote data files. + +The goal of datasource is to abstract some of the file system operations +when dealing with data files so the researcher doesn't have to know all the +low-level details. Through datasource, a researcher can obtain and use a +file with one function call, regardless of location of the file. + +DataSource is meant to augment standard python libraries, not replace them. +It should work seamlessly with standard file IO operations and the os +module. + +DataSource files can originate locally or remotely: + +- local files : '/home/guido/src/local/data.txt' +- URLs (http, ftp, ...) : 'http://www.scipy.org/not/real/data.txt' + +DataSource files can also be compressed or uncompressed. Currently only +gzip, bz2 and xz are supported. + +Example:: + + >>> # Create a DataSource, use os.curdir (default) for local storage. + >>> from numpy import DataSource + >>> ds = DataSource() + >>> + >>> # Open a remote file. + >>> # DataSource downloads the file, stores it locally in: + >>> # './www.google.com/index.html' + >>> # opens the file and returns a file object. + >>> fp = ds.open('http://www.google.com/') # doctest: +SKIP + >>> + >>> # Use the file as you normally would + >>> fp.read() # doctest: +SKIP + >>> fp.close() # doctest: +SKIP + +""" +import os + +from .._utils import set_module + + +_open = open + + +def _check_mode(mode, encoding, newline): + """Check mode and that encoding and newline are compatible. + + Parameters + ---------- + mode : str + File open mode. + encoding : str + File encoding. + newline : str + Newline for text files. + + """ + if "t" in mode: + if "b" in mode: + raise ValueError("Invalid mode: %r" % (mode,)) + else: + if encoding is not None: + raise ValueError("Argument 'encoding' not supported in binary mode") + if newline is not None: + raise ValueError("Argument 'newline' not supported in binary mode") + + +# Using a class instead of a module-level dictionary +# to reduce the initial 'import numpy' overhead by +# deferring the import of lzma, bz2 and gzip until needed + +# TODO: .zip support, .tar support? +class _FileOpeners: + """ + Container for different methods to open (un-)compressed files. + + `_FileOpeners` contains a dictionary that holds one method for each + supported file format. Attribute lookup is implemented in such a way + that an instance of `_FileOpeners` itself can be indexed with the keys + of that dictionary. Currently uncompressed files as well as files + compressed with ``gzip``, ``bz2`` or ``xz`` compression are supported. + + Notes + ----- + `_file_openers`, an instance of `_FileOpeners`, is made available for + use in the `_datasource` module. + + Examples + -------- + >>> import gzip + >>> np.lib._datasource._file_openers.keys() + [None, '.bz2', '.gz', '.xz', '.lzma'] + >>> np.lib._datasource._file_openers['.gz'] is gzip.open + True + + """ + + def __init__(self): + self._loaded = False + self._file_openers = {None: open} + + def _load(self): + if self._loaded: + return + + try: + import bz2 + self._file_openers[".bz2"] = bz2.open + except ImportError: + pass + + try: + import gzip + self._file_openers[".gz"] = gzip.open + except ImportError: + pass + + try: + import lzma + self._file_openers[".xz"] = lzma.open + self._file_openers[".lzma"] = lzma.open + except (ImportError, AttributeError): + # There are incompatible backports of lzma that do not have the + # lzma.open attribute, so catch that as well as ImportError. + pass + + self._loaded = True + + def keys(self): + """ + Return the keys of currently supported file openers. + + Parameters + ---------- + None + + Returns + ------- + keys : list + The keys are None for uncompressed files and the file extension + strings (i.e. ``'.gz'``, ``'.xz'``) for supported compression + methods. + + """ + self._load() + return list(self._file_openers.keys()) + + def __getitem__(self, key): + self._load() + return self._file_openers[key] + +_file_openers = _FileOpeners() + +def open(path, mode='r', destpath=os.curdir, encoding=None, newline=None): + """ + Open `path` with `mode` and return the file object. + + If ``path`` is an URL, it will be downloaded, stored in the + `DataSource` `destpath` directory and opened from there. + + Parameters + ---------- + path : str or pathlib.Path + Local file path or URL to open. + mode : str, optional + Mode to open `path`. Mode 'r' for reading, 'w' for writing, 'a' to + append. Available modes depend on the type of object specified by + path. Default is 'r'. + destpath : str, optional + Path to the directory where the source file gets downloaded to for + use. If `destpath` is None, a temporary directory will be created. + The default path is the current directory. + encoding : {None, str}, optional + Open text file with given encoding. The default encoding will be + what `open` uses. + newline : {None, str}, optional + Newline to use when reading text file. + + Returns + ------- + out : file object + The opened file. + + Notes + ----- + This is a convenience function that instantiates a `DataSource` and + returns the file object from ``DataSource.open(path)``. + + """ + + ds = DataSource(destpath) + return ds.open(path, mode, encoding=encoding, newline=newline) + + +@set_module('numpy.lib.npyio') +class DataSource: + """ + DataSource(destpath='.') + + A generic data source file (file, http, ftp, ...). + + DataSources can be local files or remote files/URLs. The files may + also be compressed or uncompressed. DataSource hides some of the + low-level details of downloading the file, allowing you to simply pass + in a valid file path (or URL) and obtain a file object. + + Parameters + ---------- + destpath : str or None, optional + Path to the directory where the source file gets downloaded to for + use. If `destpath` is None, a temporary directory will be created. + The default path is the current directory. + + Notes + ----- + URLs require a scheme string (``http://``) to be used, without it they + will fail:: + + >>> repos = np.lib.npyio.DataSource() + >>> repos.exists('www.google.com/index.html') + False + >>> repos.exists('http://www.google.com/index.html') + True + + Temporary directories are deleted when the DataSource is deleted. + + Examples + -------- + :: + + >>> ds = np.lib.npyio.DataSource('/home/guido') + >>> urlname = 'http://www.google.com/' + >>> gfile = ds.open('http://www.google.com/') + >>> ds.abspath(urlname) + '/home/guido/www.google.com/index.html' + + >>> ds = np.lib.npyio.DataSource(None) # use with temporary file + >>> ds.open('/home/guido/foobar.txt') + + >>> ds.abspath('/home/guido/foobar.txt') + '/tmp/.../home/guido/foobar.txt' + + """ + + def __init__(self, destpath=os.curdir): + """Create a DataSource with a local path at destpath.""" + if destpath: + self._destpath = os.path.abspath(destpath) + self._istmpdest = False + else: + import tempfile # deferring import to improve startup time + self._destpath = tempfile.mkdtemp() + self._istmpdest = True + + def __del__(self): + # Remove temp directories + if hasattr(self, '_istmpdest') and self._istmpdest: + import shutil + + shutil.rmtree(self._destpath) + + def _iszip(self, filename): + """Test if the filename is a zip file by looking at the file extension. + + """ + fname, ext = os.path.splitext(filename) + return ext in _file_openers.keys() + + def _iswritemode(self, mode): + """Test if the given mode will open a file for writing.""" + + # Currently only used to test the bz2 files. + _writemodes = ("w", "+") + for c in mode: + if c in _writemodes: + return True + return False + + def _splitzipext(self, filename): + """Split zip extension from filename and return filename. + + Returns + ------- + base, zip_ext : {tuple} + + """ + + if self._iszip(filename): + return os.path.splitext(filename) + else: + return filename, None + + def _possible_names(self, filename): + """Return a tuple containing compressed filename variations.""" + names = [filename] + if not self._iszip(filename): + for zipext in _file_openers.keys(): + if zipext: + names.append(filename+zipext) + return names + + def _isurl(self, path): + """Test if path is a net location. Tests the scheme and netloc.""" + + # We do this here to reduce the 'import numpy' initial import time. + from urllib.parse import urlparse + + # BUG : URLs require a scheme string ('http://') to be used. + # www.google.com will fail. + # Should we prepend the scheme for those that don't have it and + # test that also? Similar to the way we append .gz and test for + # for compressed versions of files. + + scheme, netloc, upath, uparams, uquery, ufrag = urlparse(path) + return bool(scheme and netloc) + + def _cache(self, path): + """Cache the file specified by path. + + Creates a copy of the file in the datasource cache. + + """ + # We import these here because importing them is slow and + # a significant fraction of numpy's total import time. + import shutil + from urllib.request import urlopen + + upath = self.abspath(path) + + # ensure directory exists + if not os.path.exists(os.path.dirname(upath)): + os.makedirs(os.path.dirname(upath)) + + # TODO: Doesn't handle compressed files! + if self._isurl(path): + with urlopen(path) as openedurl: + with _open(upath, 'wb') as f: + shutil.copyfileobj(openedurl, f) + else: + shutil.copyfile(path, upath) + return upath + + def _findfile(self, path): + """Searches for ``path`` and returns full path if found. + + If path is an URL, _findfile will cache a local copy and return the + path to the cached file. If path is a local file, _findfile will + return a path to that local file. + + The search will include possible compressed versions of the file + and return the first occurrence found. + + """ + + # Build list of possible local file paths + if not self._isurl(path): + # Valid local paths + filelist = self._possible_names(path) + # Paths in self._destpath + filelist += self._possible_names(self.abspath(path)) + else: + # Cached URLs in self._destpath + filelist = self._possible_names(self.abspath(path)) + # Remote URLs + filelist = filelist + self._possible_names(path) + + for name in filelist: + if self.exists(name): + if self._isurl(name): + name = self._cache(name) + return name + return None + + def abspath(self, path): + """ + Return absolute path of file in the DataSource directory. + + If `path` is an URL, then `abspath` will return either the location + the file exists locally or the location it would exist when opened + using the `open` method. + + Parameters + ---------- + path : str or pathlib.Path + Can be a local file or a remote URL. + + Returns + ------- + out : str + Complete path, including the `DataSource` destination directory. + + Notes + ----- + The functionality is based on `os.path.abspath`. + + """ + # We do this here to reduce the 'import numpy' initial import time. + from urllib.parse import urlparse + + # TODO: This should be more robust. Handles case where path includes + # the destpath, but not other sub-paths. Failing case: + # path = /home/guido/datafile.txt + # destpath = /home/alex/ + # upath = self.abspath(path) + # upath == '/home/alex/home/guido/datafile.txt' + + # handle case where path includes self._destpath + splitpath = path.split(self._destpath, 2) + if len(splitpath) > 1: + path = splitpath[1] + scheme, netloc, upath, uparams, uquery, ufrag = urlparse(path) + netloc = self._sanitize_relative_path(netloc) + upath = self._sanitize_relative_path(upath) + return os.path.join(self._destpath, netloc, upath) + + def _sanitize_relative_path(self, path): + """Return a sanitised relative path for which + os.path.abspath(os.path.join(base, path)).startswith(base) + """ + last = None + path = os.path.normpath(path) + while path != last: + last = path + # Note: os.path.join treats '/' as os.sep on Windows + path = path.lstrip(os.sep).lstrip('/') + path = path.lstrip(os.pardir).lstrip('..') + drive, path = os.path.splitdrive(path) # for Windows + return path + + def exists(self, path): + """ + Test if path exists. + + Test if `path` exists as (and in this order): + + - a local file. + - a remote URL that has been downloaded and stored locally in the + `DataSource` directory. + - a remote URL that has not been downloaded, but is valid and + accessible. + + Parameters + ---------- + path : str or pathlib.Path + Can be a local file or a remote URL. + + Returns + ------- + out : bool + True if `path` exists. + + Notes + ----- + When `path` is an URL, `exists` will return True if it's either + stored locally in the `DataSource` directory, or is a valid remote + URL. `DataSource` does not discriminate between the two, the file + is accessible if it exists in either location. + + """ + + # First test for local path + if os.path.exists(path): + return True + + # We import this here because importing urllib is slow and + # a significant fraction of numpy's total import time. + from urllib.request import urlopen + from urllib.error import URLError + + # Test cached url + upath = self.abspath(path) + if os.path.exists(upath): + return True + + # Test remote url + if self._isurl(path): + try: + netfile = urlopen(path) + netfile.close() + del(netfile) + return True + except URLError: + return False + return False + + def open(self, path, mode='r', encoding=None, newline=None): + """ + Open and return file-like object. + + If `path` is an URL, it will be downloaded, stored in the + `DataSource` directory and opened from there. + + Parameters + ---------- + path : str or pathlib.Path + Local file path or URL to open. + mode : {'r', 'w', 'a'}, optional + Mode to open `path`. Mode 'r' for reading, 'w' for writing, + 'a' to append. Available modes depend on the type of object + specified by `path`. Default is 'r'. + encoding : {None, str}, optional + Open text file with given encoding. The default encoding will be + what `open` uses. + newline : {None, str}, optional + Newline to use when reading text file. + + Returns + ------- + out : file object + File object. + + """ + + # TODO: There is no support for opening a file for writing which + # doesn't exist yet (creating a file). Should there be? + + # TODO: Add a ``subdir`` parameter for specifying the subdirectory + # used to store URLs in self._destpath. + + if self._isurl(path) and self._iswritemode(mode): + raise ValueError("URLs are not writeable") + + # NOTE: _findfile will fail on a new file opened for writing. + found = self._findfile(path) + if found: + _fname, ext = self._splitzipext(found) + if ext == 'bz2': + mode.replace("+", "") + return _file_openers[ext](found, mode=mode, + encoding=encoding, newline=newline) + else: + raise FileNotFoundError(f"{path} not found.") + + +class Repository (DataSource): + """ + Repository(baseurl, destpath='.') + + A data repository where multiple DataSource's share a base + URL/directory. + + `Repository` extends `DataSource` by prepending a base URL (or + directory) to all the files it handles. Use `Repository` when you will + be working with multiple files from one base URL. Initialize + `Repository` with the base URL, then refer to each file by its filename + only. + + Parameters + ---------- + baseurl : str + Path to the local directory or remote location that contains the + data files. + destpath : str or None, optional + Path to the directory where the source file gets downloaded to for + use. If `destpath` is None, a temporary directory will be created. + The default path is the current directory. + + Examples + -------- + To analyze all files in the repository, do something like this + (note: this is not self-contained code):: + + >>> repos = np.lib._datasource.Repository('/home/user/data/dir/') + >>> for filename in filelist: + ... fp = repos.open(filename) + ... fp.analyze() + ... fp.close() + + Similarly you could use a URL for a repository:: + + >>> repos = np.lib._datasource.Repository('http://www.xyz.edu/data') + + """ + + def __init__(self, baseurl, destpath=os.curdir): + """Create a Repository with a shared url or directory of baseurl.""" + DataSource.__init__(self, destpath=destpath) + self._baseurl = baseurl + + def __del__(self): + DataSource.__del__(self) + + def _fullpath(self, path): + """Return complete path for path. Prepends baseurl if necessary.""" + splitpath = path.split(self._baseurl, 2) + if len(splitpath) == 1: + result = os.path.join(self._baseurl, path) + else: + result = path # path contains baseurl already + return result + + def _findfile(self, path): + """Extend DataSource method to prepend baseurl to ``path``.""" + return DataSource._findfile(self, self._fullpath(path)) + + def abspath(self, path): + """ + Return absolute path of file in the Repository directory. + + If `path` is an URL, then `abspath` will return either the location + the file exists locally or the location it would exist when opened + using the `open` method. + + Parameters + ---------- + path : str or pathlib.Path + Can be a local file or a remote URL. This may, but does not + have to, include the `baseurl` with which the `Repository` was + initialized. + + Returns + ------- + out : str + Complete path, including the `DataSource` destination directory. + + """ + return DataSource.abspath(self, self._fullpath(path)) + + def exists(self, path): + """ + Test if path exists prepending Repository base URL to path. + + Test if `path` exists as (and in this order): + + - a local file. + - a remote URL that has been downloaded and stored locally in the + `DataSource` directory. + - a remote URL that has not been downloaded, but is valid and + accessible. + + Parameters + ---------- + path : str or pathlib.Path + Can be a local file or a remote URL. This may, but does not + have to, include the `baseurl` with which the `Repository` was + initialized. + + Returns + ------- + out : bool + True if `path` exists. + + Notes + ----- + When `path` is an URL, `exists` will return True if it's either + stored locally in the `DataSource` directory, or is a valid remote + URL. `DataSource` does not discriminate between the two, the file + is accessible if it exists in either location. + + """ + return DataSource.exists(self, self._fullpath(path)) + + def open(self, path, mode='r', encoding=None, newline=None): + """ + Open and return file-like object prepending Repository base URL. + + If `path` is an URL, it will be downloaded, stored in the + DataSource directory and opened from there. + + Parameters + ---------- + path : str or pathlib.Path + Local file path or URL to open. This may, but does not have to, + include the `baseurl` with which the `Repository` was + initialized. + mode : {'r', 'w', 'a'}, optional + Mode to open `path`. Mode 'r' for reading, 'w' for writing, + 'a' to append. Available modes depend on the type of object + specified by `path`. Default is 'r'. + encoding : {None, str}, optional + Open text file with given encoding. The default encoding will be + what `open` uses. + newline : {None, str}, optional + Newline to use when reading text file. + + Returns + ------- + out : file object + File object. + + """ + return DataSource.open(self, self._fullpath(path), mode, + encoding=encoding, newline=newline) + + def listdir(self): + """ + List files in the source Repository. + + Returns + ------- + files : list of str or pathlib.Path + List of file names (not containing a directory part). + + Notes + ----- + Does not currently work for remote repositories. + + """ + if self._isurl(self._baseurl): + raise NotImplementedError( + "Directory listing of URLs, not supported yet.") + else: + return os.listdir(self._baseurl) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_function_base_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_function_base_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..1a1507bfc10ef0a4e7afa0bc4f70612d6490315b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_function_base_impl.py @@ -0,0 +1,5936 @@ +import builtins +import collections.abc +import functools +import re +import sys +import warnings + +import numpy as np +import numpy._core.numeric as _nx +from numpy._core import transpose, overrides +from numpy._core.numeric import ( + ones, zeros_like, arange, concatenate, array, asarray, asanyarray, empty, + ndarray, take, dot, where, intp, integer, isscalar, absolute + ) +from numpy._core.umath import ( + pi, add, arctan2, frompyfunc, cos, less_equal, sqrt, sin, + mod, exp, not_equal, subtract, minimum + ) +from numpy._core.fromnumeric import ( + ravel, nonzero, partition, mean, any, sum + ) +from numpy._core.numerictypes import typecodes +from numpy.lib._twodim_base_impl import diag +from numpy._core.multiarray import ( + _place, bincount, normalize_axis_index, _monotonicity, + interp as compiled_interp, interp_complex as compiled_interp_complex + ) +from numpy._core._multiarray_umath import _array_converter +from numpy._utils import set_module + +# needed in this module for compatibility +from numpy.lib._histograms_impl import histogram, histogramdd # noqa: F401 + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +__all__ = [ + 'select', 'piecewise', 'trim_zeros', 'copy', 'iterable', 'percentile', + 'diff', 'gradient', 'angle', 'unwrap', 'sort_complex', 'flip', + 'rot90', 'extract', 'place', 'vectorize', 'asarray_chkfinite', 'average', + 'bincount', 'digitize', 'cov', 'corrcoef', + 'median', 'sinc', 'hamming', 'hanning', 'bartlett', + 'blackman', 'kaiser', 'trapezoid', 'trapz', 'i0', + 'meshgrid', 'delete', 'insert', 'append', 'interp', + 'quantile' + ] + +# _QuantileMethods is a dictionary listing all the supported methods to +# compute quantile/percentile. +# +# Below virtual_index refers to the index of the element where the percentile +# would be found in the sorted sample. +# When the sample contains exactly the percentile wanted, the virtual_index is +# an integer to the index of this element. +# When the percentile wanted is in between two elements, the virtual_index +# is made of a integer part (a.k.a 'i' or 'left') and a fractional part +# (a.k.a 'g' or 'gamma') +# +# Each method in _QuantileMethods has two properties +# get_virtual_index : Callable +# The function used to compute the virtual_index. +# fix_gamma : Callable +# A function used for discret methods to force the index to a specific value. +_QuantileMethods = dict( + # --- HYNDMAN and FAN METHODS + # Discrete methods + inverted_cdf=dict( + get_virtual_index=lambda n, quantiles: _inverted_cdf(n, quantiles), + fix_gamma=None, # should never be called + ), + averaged_inverted_cdf=dict( + get_virtual_index=lambda n, quantiles: (n * quantiles) - 1, + fix_gamma=lambda gamma, _: _get_gamma_mask( + shape=gamma.shape, + default_value=1., + conditioned_value=0.5, + where=gamma == 0), + ), + closest_observation=dict( + get_virtual_index=lambda n, quantiles: _closest_observation(n, + quantiles), + fix_gamma=None, # should never be called + ), + # Continuous methods + interpolated_inverted_cdf=dict( + get_virtual_index=lambda n, quantiles: + _compute_virtual_index(n, quantiles, 0, 1), + fix_gamma=lambda gamma, _: gamma, + ), + hazen=dict( + get_virtual_index=lambda n, quantiles: + _compute_virtual_index(n, quantiles, 0.5, 0.5), + fix_gamma=lambda gamma, _: gamma, + ), + weibull=dict( + get_virtual_index=lambda n, quantiles: + _compute_virtual_index(n, quantiles, 0, 0), + fix_gamma=lambda gamma, _: gamma, + ), + # Default method. + # To avoid some rounding issues, `(n-1) * quantiles` is preferred to + # `_compute_virtual_index(n, quantiles, 1, 1)`. + # They are mathematically equivalent. + linear=dict( + get_virtual_index=lambda n, quantiles: (n - 1) * quantiles, + fix_gamma=lambda gamma, _: gamma, + ), + median_unbiased=dict( + get_virtual_index=lambda n, quantiles: + _compute_virtual_index(n, quantiles, 1 / 3.0, 1 / 3.0), + fix_gamma=lambda gamma, _: gamma, + ), + normal_unbiased=dict( + get_virtual_index=lambda n, quantiles: + _compute_virtual_index(n, quantiles, 3 / 8.0, 3 / 8.0), + fix_gamma=lambda gamma, _: gamma, + ), + # --- OTHER METHODS + lower=dict( + get_virtual_index=lambda n, quantiles: np.floor( + (n - 1) * quantiles).astype(np.intp), + fix_gamma=None, # should never be called, index dtype is int + ), + higher=dict( + get_virtual_index=lambda n, quantiles: np.ceil( + (n - 1) * quantiles).astype(np.intp), + fix_gamma=None, # should never be called, index dtype is int + ), + midpoint=dict( + get_virtual_index=lambda n, quantiles: 0.5 * ( + np.floor((n - 1) * quantiles) + + np.ceil((n - 1) * quantiles)), + fix_gamma=lambda gamma, index: _get_gamma_mask( + shape=gamma.shape, + default_value=0.5, + conditioned_value=0., + where=index % 1 == 0), + ), + nearest=dict( + get_virtual_index=lambda n, quantiles: np.around( + (n - 1) * quantiles).astype(np.intp), + fix_gamma=None, + # should never be called, index dtype is int + )) + + +def _rot90_dispatcher(m, k=None, axes=None): + return (m,) + + +@array_function_dispatch(_rot90_dispatcher) +def rot90(m, k=1, axes=(0, 1)): + """ + Rotate an array by 90 degrees in the plane specified by axes. + + Rotation direction is from the first towards the second axis. + This means for a 2D array with the default `k` and `axes`, the + rotation will be counterclockwise. + + Parameters + ---------- + m : array_like + Array of two or more dimensions. + k : integer + Number of times the array is rotated by 90 degrees. + axes : (2,) array_like + The array is rotated in the plane defined by the axes. + Axes must be different. + + .. versionadded:: 1.12.0 + + Returns + ------- + y : ndarray + A rotated view of `m`. + + See Also + -------- + flip : Reverse the order of elements in an array along the given axis. + fliplr : Flip an array horizontally. + flipud : Flip an array vertically. + + Notes + ----- + ``rot90(m, k=1, axes=(1,0))`` is the reverse of + ``rot90(m, k=1, axes=(0,1))`` + + ``rot90(m, k=1, axes=(1,0))`` is equivalent to + ``rot90(m, k=-1, axes=(0,1))`` + + Examples + -------- + >>> m = np.array([[1,2],[3,4]], int) + >>> m + array([[1, 2], + [3, 4]]) + >>> np.rot90(m) + array([[2, 4], + [1, 3]]) + >>> np.rot90(m, 2) + array([[4, 3], + [2, 1]]) + >>> m = np.arange(8).reshape((2,2,2)) + >>> np.rot90(m, 1, (1,2)) + array([[[1, 3], + [0, 2]], + [[5, 7], + [4, 6]]]) + + """ + axes = tuple(axes) + if len(axes) != 2: + raise ValueError("len(axes) must be 2.") + + m = asanyarray(m) + + if axes[0] == axes[1] or absolute(axes[0] - axes[1]) == m.ndim: + raise ValueError("Axes must be different.") + + if (axes[0] >= m.ndim or axes[0] < -m.ndim + or axes[1] >= m.ndim or axes[1] < -m.ndim): + raise ValueError("Axes={} out of range for array of ndim={}." + .format(axes, m.ndim)) + + k %= 4 + + if k == 0: + return m[:] + if k == 2: + return flip(flip(m, axes[0]), axes[1]) + + axes_list = arange(0, m.ndim) + (axes_list[axes[0]], axes_list[axes[1]]) = (axes_list[axes[1]], + axes_list[axes[0]]) + + if k == 1: + return transpose(flip(m, axes[1]), axes_list) + else: + # k == 3 + return flip(transpose(m, axes_list), axes[1]) + + +def _flip_dispatcher(m, axis=None): + return (m,) + + +@array_function_dispatch(_flip_dispatcher) +def flip(m, axis=None): + """ + Reverse the order of elements in an array along the given axis. + + The shape of the array is preserved, but the elements are reordered. + + .. versionadded:: 1.12.0 + + Parameters + ---------- + m : array_like + Input array. + axis : None or int or tuple of ints, optional + Axis or axes along which to flip over. The default, + axis=None, will flip over all of the axes of the input array. + If axis is negative it counts from the last to the first axis. + + If axis is a tuple of ints, flipping is performed on all of the axes + specified in the tuple. + + .. versionchanged:: 1.15.0 + None and tuples of axes are supported + + Returns + ------- + out : array_like + A view of `m` with the entries of axis reversed. Since a view is + returned, this operation is done in constant time. + + See Also + -------- + flipud : Flip an array vertically (axis=0). + fliplr : Flip an array horizontally (axis=1). + + Notes + ----- + flip(m, 0) is equivalent to flipud(m). + + flip(m, 1) is equivalent to fliplr(m). + + flip(m, n) corresponds to ``m[...,::-1,...]`` with ``::-1`` at position n. + + flip(m) corresponds to ``m[::-1,::-1,...,::-1]`` with ``::-1`` at all + positions. + + flip(m, (0, 1)) corresponds to ``m[::-1,::-1,...]`` with ``::-1`` at + position 0 and position 1. + + Examples + -------- + >>> A = np.arange(8).reshape((2,2,2)) + >>> A + array([[[0, 1], + [2, 3]], + [[4, 5], + [6, 7]]]) + >>> np.flip(A, 0) + array([[[4, 5], + [6, 7]], + [[0, 1], + [2, 3]]]) + >>> np.flip(A, 1) + array([[[2, 3], + [0, 1]], + [[6, 7], + [4, 5]]]) + >>> np.flip(A) + array([[[7, 6], + [5, 4]], + [[3, 2], + [1, 0]]]) + >>> np.flip(A, (0, 2)) + array([[[5, 4], + [7, 6]], + [[1, 0], + [3, 2]]]) + >>> A = np.random.randn(3,4,5) + >>> np.all(np.flip(A,2) == A[:,:,::-1,...]) + True + """ + if not hasattr(m, 'ndim'): + m = asarray(m) + if axis is None: + indexer = (np.s_[::-1],) * m.ndim + else: + axis = _nx.normalize_axis_tuple(axis, m.ndim) + indexer = [np.s_[:]] * m.ndim + for ax in axis: + indexer[ax] = np.s_[::-1] + indexer = tuple(indexer) + return m[indexer] + + +@set_module('numpy') +def iterable(y): + """ + Check whether or not an object can be iterated over. + + Parameters + ---------- + y : object + Input object. + + Returns + ------- + b : bool + Return ``True`` if the object has an iterator method or is a + sequence and ``False`` otherwise. + + + Examples + -------- + >>> np.iterable([1, 2, 3]) + True + >>> np.iterable(2) + False + + Notes + ----- + In most cases, the results of ``np.iterable(obj)`` are consistent with + ``isinstance(obj, collections.abc.Iterable)``. One notable exception is + the treatment of 0-dimensional arrays:: + + >>> from collections.abc import Iterable + >>> a = np.array(1.0) # 0-dimensional numpy array + >>> isinstance(a, Iterable) + True + >>> np.iterable(a) + False + + """ + try: + iter(y) + except TypeError: + return False + return True + + +def _weights_are_valid(weights, a, axis): + """Validate weights array. + + We assume, weights is not None. + """ + wgt = np.asanyarray(weights) + + # Sanity checks + if a.shape != wgt.shape: + if axis is None: + raise TypeError( + "Axis must be specified when shapes of a and weights " + "differ.") + if wgt.shape != tuple(a.shape[ax] for ax in axis): + raise ValueError( + "Shape of weights must be consistent with " + "shape of a along specified axis.") + + # setup wgt to broadcast along axis + wgt = wgt.transpose(np.argsort(axis)) + wgt = wgt.reshape(tuple((s if ax in axis else 1) + for ax, s in enumerate(a.shape))) + return wgt + + +def _average_dispatcher(a, axis=None, weights=None, returned=None, *, + keepdims=None): + return (a, weights) + + +@array_function_dispatch(_average_dispatcher) +def average(a, axis=None, weights=None, returned=False, *, + keepdims=np._NoValue): + """ + Compute the weighted average along the specified axis. + + Parameters + ---------- + a : array_like + Array containing data to be averaged. If `a` is not an array, a + conversion is attempted. + axis : None or int or tuple of ints, optional + Axis or axes along which to average `a`. The default, + `axis=None`, will average over all of the elements of the input array. + If axis is negative it counts from the last to the first axis. + + .. versionadded:: 1.7.0 + + If axis is a tuple of ints, averaging is performed on all of the axes + specified in the tuple instead of a single axis or all the axes as + before. + weights : array_like, optional + An array of weights associated with the values in `a`. Each value in + `a` contributes to the average according to its associated weight. + The array of weights must be the same shape as `a` if no axis is + specified, otherwise the weights must have dimensions and shape + consistent with `a` along the specified axis. + If `weights=None`, then all data in `a` are assumed to have a + weight equal to one. + The calculation is:: + + avg = sum(a * weights) / sum(weights) + + where the sum is over all included elements. + The only constraint on the values of `weights` is that `sum(weights)` + must not be 0. + returned : bool, optional + Default is `False`. If `True`, the tuple (`average`, `sum_of_weights`) + is returned, otherwise only the average is returned. + If `weights=None`, `sum_of_weights` is equivalent to the number of + elements over which the average is taken. + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the original `a`. + *Note:* `keepdims` will not work with instances of `numpy.matrix` + or other classes whose methods do not support `keepdims`. + + .. versionadded:: 1.23.0 + + Returns + ------- + retval, [sum_of_weights] : array_type or double + Return the average along the specified axis. When `returned` is `True`, + return a tuple with the average as the first element and the sum + of the weights as the second element. `sum_of_weights` is of the + same type as `retval`. The result dtype follows a general pattern. + If `weights` is None, the result dtype will be that of `a` , or ``float64`` + if `a` is integral. Otherwise, if `weights` is not None and `a` is non- + integral, the result type will be the type of lowest precision capable of + representing values of both `a` and `weights`. If `a` happens to be + integral, the previous rules still applies but the result dtype will + at least be ``float64``. + + Raises + ------ + ZeroDivisionError + When all weights along axis are zero. See `numpy.ma.average` for a + version robust to this type of error. + TypeError + When `weights` does not have the same shape as `a`, and `axis=None`. + ValueError + When `weights` does not have dimensions and shape consistent with `a` + along specified `axis`. + + See Also + -------- + mean + + ma.average : average for masked arrays -- useful if your data contains + "missing" values + numpy.result_type : Returns the type that results from applying the + numpy type promotion rules to the arguments. + + Examples + -------- + >>> data = np.arange(1, 5) + >>> data + array([1, 2, 3, 4]) + >>> np.average(data) + 2.5 + >>> np.average(np.arange(1, 11), weights=np.arange(10, 0, -1)) + 4.0 + + >>> data = np.arange(6).reshape((3, 2)) + >>> data + array([[0, 1], + [2, 3], + [4, 5]]) + >>> np.average(data, axis=1, weights=[1./4, 3./4]) + array([0.75, 2.75, 4.75]) + >>> np.average(data, weights=[1./4, 3./4]) + Traceback (most recent call last): + ... + TypeError: Axis must be specified when shapes of a and weights differ. + + With ``keepdims=True``, the following result has shape (3, 1). + + >>> np.average(data, axis=1, keepdims=True) + array([[0.5], + [2.5], + [4.5]]) + + >>> data = np.arange(8).reshape((2, 2, 2)) + >>> data + array([[[0, 1], + [2, 3]], + [[4, 5], + [6, 7]]]) + >>> np.average(data, axis=(0, 1), weights=[[1./4, 3./4], [1., 1./2]]) + array([3.4, 4.4]) + >>> np.average(data, axis=0, weights=[[1./4, 3./4], [1., 1./2]]) + Traceback (most recent call last): + ... + ValueError: Shape of weights must be consistent + with shape of a along specified axis. + """ + a = np.asanyarray(a) + + if axis is not None: + axis = _nx.normalize_axis_tuple(axis, a.ndim, argname="axis") + + if keepdims is np._NoValue: + # Don't pass on the keepdims argument if one wasn't given. + keepdims_kw = {} + else: + keepdims_kw = {'keepdims': keepdims} + + if weights is None: + avg = a.mean(axis, **keepdims_kw) + avg_as_array = np.asanyarray(avg) + scl = avg_as_array.dtype.type(a.size/avg_as_array.size) + else: + wgt = _weights_are_valid(weights=weights, a=a, axis=axis) + + if issubclass(a.dtype.type, (np.integer, np.bool)): + result_dtype = np.result_type(a.dtype, wgt.dtype, 'f8') + else: + result_dtype = np.result_type(a.dtype, wgt.dtype) + + scl = wgt.sum(axis=axis, dtype=result_dtype, **keepdims_kw) + if np.any(scl == 0.0): + raise ZeroDivisionError( + "Weights sum to zero, can't be normalized") + + avg = avg_as_array = np.multiply(a, wgt, + dtype=result_dtype).sum(axis, **keepdims_kw) / scl + + if returned: + if scl.shape != avg_as_array.shape: + scl = np.broadcast_to(scl, avg_as_array.shape).copy() + return avg, scl + else: + return avg + + +@set_module('numpy') +def asarray_chkfinite(a, dtype=None, order=None): + """Convert the input to an array, checking for NaNs or Infs. + + Parameters + ---------- + a : array_like + Input data, in any form that can be converted to an array. This + includes lists, lists of tuples, tuples, tuples of tuples, tuples + of lists and ndarrays. Success requires no NaNs or Infs. + dtype : data-type, optional + By default, the data-type is inferred from the input data. + order : {'C', 'F', 'A', 'K'}, optional + Memory layout. 'A' and 'K' depend on the order of input array a. + 'C' row-major (C-style), + 'F' column-major (Fortran-style) memory representation. + 'A' (any) means 'F' if `a` is Fortran contiguous, 'C' otherwise + 'K' (keep) preserve input order + Defaults to 'C'. + + Returns + ------- + out : ndarray + Array interpretation of `a`. No copy is performed if the input + is already an ndarray. If `a` is a subclass of ndarray, a base + class ndarray is returned. + + Raises + ------ + ValueError + Raises ValueError if `a` contains NaN (Not a Number) or Inf (Infinity). + + See Also + -------- + asarray : Create and array. + asanyarray : Similar function which passes through subclasses. + ascontiguousarray : Convert input to a contiguous array. + asfortranarray : Convert input to an ndarray with column-major + memory order. + fromiter : Create an array from an iterator. + fromfunction : Construct an array by executing a function on grid + positions. + + Examples + -------- + Convert a list into an array. If all elements are finite + ``asarray_chkfinite`` is identical to ``asarray``. + + >>> a = [1, 2] + >>> np.asarray_chkfinite(a, dtype=float) + array([1., 2.]) + + Raises ValueError if array_like contains Nans or Infs. + + >>> a = [1, 2, np.inf] + >>> try: + ... np.asarray_chkfinite(a) + ... except ValueError: + ... print('ValueError') + ... + ValueError + + """ + a = asarray(a, dtype=dtype, order=order) + if a.dtype.char in typecodes['AllFloat'] and not np.isfinite(a).all(): + raise ValueError( + "array must not contain infs or NaNs") + return a + + +def _piecewise_dispatcher(x, condlist, funclist, *args, **kw): + yield x + # support the undocumented behavior of allowing scalars + if np.iterable(condlist): + yield from condlist + + +@array_function_dispatch(_piecewise_dispatcher) +def piecewise(x, condlist, funclist, *args, **kw): + """ + Evaluate a piecewise-defined function. + + Given a set of conditions and corresponding functions, evaluate each + function on the input data wherever its condition is true. + + Parameters + ---------- + x : ndarray or scalar + The input domain. + condlist : list of bool arrays or bool scalars + Each boolean array corresponds to a function in `funclist`. Wherever + `condlist[i]` is True, `funclist[i](x)` is used as the output value. + + Each boolean array in `condlist` selects a piece of `x`, + and should therefore be of the same shape as `x`. + + The length of `condlist` must correspond to that of `funclist`. + If one extra function is given, i.e. if + ``len(funclist) == len(condlist) + 1``, then that extra function + is the default value, used wherever all conditions are false. + funclist : list of callables, f(x,*args,**kw), or scalars + Each function is evaluated over `x` wherever its corresponding + condition is True. It should take a 1d array as input and give an 1d + array or a scalar value as output. If, instead of a callable, + a scalar is provided then a constant function (``lambda x: scalar``) is + assumed. + args : tuple, optional + Any further arguments given to `piecewise` are passed to the functions + upon execution, i.e., if called ``piecewise(..., ..., 1, 'a')``, then + each function is called as ``f(x, 1, 'a')``. + kw : dict, optional + Keyword arguments used in calling `piecewise` are passed to the + functions upon execution, i.e., if called + ``piecewise(..., ..., alpha=1)``, then each function is called as + ``f(x, alpha=1)``. + + Returns + ------- + out : ndarray + The output is the same shape and type as x and is found by + calling the functions in `funclist` on the appropriate portions of `x`, + as defined by the boolean arrays in `condlist`. Portions not covered + by any condition have a default value of 0. + + + See Also + -------- + choose, select, where + + Notes + ----- + This is similar to choose or select, except that functions are + evaluated on elements of `x` that satisfy the corresponding condition from + `condlist`. + + The result is:: + + |-- + |funclist[0](x[condlist[0]]) + out = |funclist[1](x[condlist[1]]) + |... + |funclist[n2](x[condlist[n2]]) + |-- + + Examples + -------- + Define the signum function, which is -1 for ``x < 0`` and +1 for ``x >= 0``. + + >>> x = np.linspace(-2.5, 2.5, 6) + >>> np.piecewise(x, [x < 0, x >= 0], [-1, 1]) + array([-1., -1., -1., 1., 1., 1.]) + + Define the absolute value, which is ``-x`` for ``x <0`` and ``x`` for + ``x >= 0``. + + >>> np.piecewise(x, [x < 0, x >= 0], [lambda x: -x, lambda x: x]) + array([2.5, 1.5, 0.5, 0.5, 1.5, 2.5]) + + Apply the same function to a scalar value. + + >>> y = -2 + >>> np.piecewise(y, [y < 0, y >= 0], [lambda x: -x, lambda x: x]) + array(2) + + """ + x = asanyarray(x) + n2 = len(funclist) + + # undocumented: single condition is promoted to a list of one condition + if isscalar(condlist) or ( + not isinstance(condlist[0], (list, ndarray)) and x.ndim != 0): + condlist = [condlist] + + condlist = asarray(condlist, dtype=bool) + n = len(condlist) + + if n == n2 - 1: # compute the "otherwise" condition. + condelse = ~np.any(condlist, axis=0, keepdims=True) + condlist = np.concatenate([condlist, condelse], axis=0) + n += 1 + elif n != n2: + raise ValueError( + "with {} condition(s), either {} or {} functions are expected" + .format(n, n, n+1) + ) + + y = zeros_like(x) + for cond, func in zip(condlist, funclist): + if not isinstance(func, collections.abc.Callable): + y[cond] = func + else: + vals = x[cond] + if vals.size > 0: + y[cond] = func(vals, *args, **kw) + + return y + + +def _select_dispatcher(condlist, choicelist, default=None): + yield from condlist + yield from choicelist + + +@array_function_dispatch(_select_dispatcher) +def select(condlist, choicelist, default=0): + """ + Return an array drawn from elements in choicelist, depending on conditions. + + Parameters + ---------- + condlist : list of bool ndarrays + The list of conditions which determine from which array in `choicelist` + the output elements are taken. When multiple conditions are satisfied, + the first one encountered in `condlist` is used. + choicelist : list of ndarrays + The list of arrays from which the output elements are taken. It has + to be of the same length as `condlist`. + default : scalar, optional + The element inserted in `output` when all conditions evaluate to False. + + Returns + ------- + output : ndarray + The output at position m is the m-th element of the array in + `choicelist` where the m-th element of the corresponding array in + `condlist` is True. + + See Also + -------- + where : Return elements from one of two arrays depending on condition. + take, choose, compress, diag, diagonal + + Examples + -------- + Beginning with an array of integers from 0 to 5 (inclusive), + elements less than ``3`` are negated, elements greater than ``3`` + are squared, and elements not meeting either of these conditions + (exactly ``3``) are replaced with a `default` value of ``42``. + + >>> x = np.arange(6) + >>> condlist = [x<3, x>3] + >>> choicelist = [x, x**2] + >>> np.select(condlist, choicelist, 42) + array([ 0, 1, 2, 42, 16, 25]) + + When multiple conditions are satisfied, the first one encountered in + `condlist` is used. + + >>> condlist = [x<=4, x>3] + >>> choicelist = [x, x**2] + >>> np.select(condlist, choicelist, 55) + array([ 0, 1, 2, 3, 4, 25]) + + """ + # Check the size of condlist and choicelist are the same, or abort. + if len(condlist) != len(choicelist): + raise ValueError( + 'list of cases must be same length as list of conditions') + + # Now that the dtype is known, handle the deprecated select([], []) case + if len(condlist) == 0: + raise ValueError("select with an empty condition list is not possible") + + # TODO: This preserves the Python int, float, complex manually to get the + # right `result_type` with NEP 50. Most likely we will grow a better + # way to spell this (and this can be replaced). + choicelist = [ + choice if type(choice) in (int, float, complex) else np.asarray(choice) + for choice in choicelist] + choicelist.append(default if type(default) in (int, float, complex) + else np.asarray(default)) + + try: + dtype = np.result_type(*choicelist) + except TypeError as e: + msg = f'Choicelist and default value do not have a common dtype: {e}' + raise TypeError(msg) from None + + # Convert conditions to arrays and broadcast conditions and choices + # as the shape is needed for the result. Doing it separately optimizes + # for example when all choices are scalars. + condlist = np.broadcast_arrays(*condlist) + choicelist = np.broadcast_arrays(*choicelist) + + # If cond array is not an ndarray in boolean format or scalar bool, abort. + for i, cond in enumerate(condlist): + if cond.dtype.type is not np.bool: + raise TypeError( + 'invalid entry {} in condlist: should be boolean ndarray'.format(i)) + + if choicelist[0].ndim == 0: + # This may be common, so avoid the call. + result_shape = condlist[0].shape + else: + result_shape = np.broadcast_arrays(condlist[0], choicelist[0])[0].shape + + result = np.full(result_shape, choicelist[-1], dtype) + + # Use np.copyto to burn each choicelist array onto result, using the + # corresponding condlist as a boolean mask. This is done in reverse + # order since the first choice should take precedence. + choicelist = choicelist[-2::-1] + condlist = condlist[::-1] + for choice, cond in zip(choicelist, condlist): + np.copyto(result, choice, where=cond) + + return result + + +def _copy_dispatcher(a, order=None, subok=None): + return (a,) + + +@array_function_dispatch(_copy_dispatcher) +def copy(a, order='K', subok=False): + """ + Return an array copy of the given object. + + Parameters + ---------- + a : array_like + Input data. + order : {'C', 'F', 'A', 'K'}, optional + Controls the memory layout of the copy. 'C' means C-order, + 'F' means F-order, 'A' means 'F' if `a` is Fortran contiguous, + 'C' otherwise. 'K' means match the layout of `a` as closely + as possible. (Note that this function and :meth:`ndarray.copy` are very + similar, but have different default values for their order= + arguments.) + subok : bool, optional + If True, then sub-classes will be passed-through, otherwise the + returned array will be forced to be a base-class array (defaults to False). + + .. versionadded:: 1.19.0 + + Returns + ------- + arr : ndarray + Array interpretation of `a`. + + See Also + -------- + ndarray.copy : Preferred method for creating an array copy + + Notes + ----- + This is equivalent to: + + >>> np.array(a, copy=True) #doctest: +SKIP + + The copy made of the data is shallow, i.e., for arrays with object dtype, + the new array will point to the same objects. + See Examples from `ndarray.copy`. + + Examples + -------- + Create an array x, with a reference y and a copy z: + + >>> x = np.array([1, 2, 3]) + >>> y = x + >>> z = np.copy(x) + + Note that, when we modify x, y changes, but not z: + + >>> x[0] = 10 + >>> x[0] == y[0] + True + >>> x[0] == z[0] + False + + Note that, np.copy clears previously set WRITEABLE=False flag. + + >>> a = np.array([1, 2, 3]) + >>> a.flags["WRITEABLE"] = False + >>> b = np.copy(a) + >>> b.flags["WRITEABLE"] + True + >>> b[0] = 3 + >>> b + array([3, 2, 3]) + """ + return array(a, order=order, subok=subok, copy=True) + +# Basic operations + + +def _gradient_dispatcher(f, *varargs, axis=None, edge_order=None): + yield f + yield from varargs + + +@array_function_dispatch(_gradient_dispatcher) +def gradient(f, *varargs, axis=None, edge_order=1): + """ + Return the gradient of an N-dimensional array. + + The gradient is computed using second order accurate central differences + in the interior points and either first or second order accurate one-sides + (forward or backwards) differences at the boundaries. + The returned gradient hence has the same shape as the input array. + + Parameters + ---------- + f : array_like + An N-dimensional array containing samples of a scalar function. + varargs : list of scalar or array, optional + Spacing between f values. Default unitary spacing for all dimensions. + Spacing can be specified using: + + 1. single scalar to specify a sample distance for all dimensions. + 2. N scalars to specify a constant sample distance for each dimension. + i.e. `dx`, `dy`, `dz`, ... + 3. N arrays to specify the coordinates of the values along each + dimension of F. The length of the array must match the size of + the corresponding dimension + 4. Any combination of N scalars/arrays with the meaning of 2. and 3. + + If `axis` is given, the number of varargs must equal the number of axes. + Default: 1. + + edge_order : {1, 2}, optional + Gradient is calculated using N-th order accurate differences + at the boundaries. Default: 1. + + .. versionadded:: 1.9.1 + + axis : None or int or tuple of ints, optional + Gradient is calculated only along the given axis or axes + The default (axis = None) is to calculate the gradient for all the axes + of the input array. axis may be negative, in which case it counts from + the last to the first axis. + + .. versionadded:: 1.11.0 + + Returns + ------- + gradient : ndarray or list of ndarray + A list of ndarrays (or a single ndarray if there is only one dimension) + corresponding to the derivatives of f with respect to each dimension. + Each derivative has the same shape as f. + + Examples + -------- + >>> f = np.array([1, 2, 4, 7, 11, 16], dtype=float) + >>> np.gradient(f) + array([1. , 1.5, 2.5, 3.5, 4.5, 5. ]) + >>> np.gradient(f, 2) + array([0.5 , 0.75, 1.25, 1.75, 2.25, 2.5 ]) + + Spacing can be also specified with an array that represents the coordinates + of the values F along the dimensions. + For instance a uniform spacing: + + >>> x = np.arange(f.size) + >>> np.gradient(f, x) + array([1. , 1.5, 2.5, 3.5, 4.5, 5. ]) + + Or a non uniform one: + + >>> x = np.array([0., 1., 1.5, 3.5, 4., 6.], dtype=float) + >>> np.gradient(f, x) + array([1. , 3. , 3.5, 6.7, 6.9, 2.5]) + + For two dimensional arrays, the return will be two arrays ordered by + axis. In this example the first array stands for the gradient in + rows and the second one in columns direction: + + >>> np.gradient(np.array([[1, 2, 6], [3, 4, 5]], dtype=float)) + [array([[ 2., 2., -1.], + [ 2., 2., -1.]]), array([[1. , 2.5, 4. ], + [1. , 1. , 1. ]])] + + In this example the spacing is also specified: + uniform for axis=0 and non uniform for axis=1 + + >>> dx = 2. + >>> y = [1., 1.5, 3.5] + >>> np.gradient(np.array([[1, 2, 6], [3, 4, 5]], dtype=float), dx, y) + [array([[ 1. , 1. , -0.5], + [ 1. , 1. , -0.5]]), array([[2. , 2. , 2. ], + [2. , 1.7, 0.5]])] + + It is possible to specify how boundaries are treated using `edge_order` + + >>> x = np.array([0, 1, 2, 3, 4]) + >>> f = x**2 + >>> np.gradient(f, edge_order=1) + array([1., 2., 4., 6., 7.]) + >>> np.gradient(f, edge_order=2) + array([0., 2., 4., 6., 8.]) + + The `axis` keyword can be used to specify a subset of axes of which the + gradient is calculated + + >>> np.gradient(np.array([[1, 2, 6], [3, 4, 5]], dtype=float), axis=0) + array([[ 2., 2., -1.], + [ 2., 2., -1.]]) + + Notes + ----- + Assuming that :math:`f\\in C^{3}` (i.e., :math:`f` has at least 3 continuous + derivatives) and let :math:`h_{*}` be a non-homogeneous stepsize, we + minimize the "consistency error" :math:`\\eta_{i}` between the true gradient + and its estimate from a linear combination of the neighboring grid-points: + + .. math:: + + \\eta_{i} = f_{i}^{\\left(1\\right)} - + \\left[ \\alpha f\\left(x_{i}\\right) + + \\beta f\\left(x_{i} + h_{d}\\right) + + \\gamma f\\left(x_{i}-h_{s}\\right) + \\right] + + By substituting :math:`f(x_{i} + h_{d})` and :math:`f(x_{i} - h_{s})` + with their Taylor series expansion, this translates into solving + the following the linear system: + + .. math:: + + \\left\\{ + \\begin{array}{r} + \\alpha+\\beta+\\gamma=0 \\\\ + \\beta h_{d}-\\gamma h_{s}=1 \\\\ + \\beta h_{d}^{2}+\\gamma h_{s}^{2}=0 + \\end{array} + \\right. + + The resulting approximation of :math:`f_{i}^{(1)}` is the following: + + .. math:: + + \\hat f_{i}^{(1)} = + \\frac{ + h_{s}^{2}f\\left(x_{i} + h_{d}\\right) + + \\left(h_{d}^{2} - h_{s}^{2}\\right)f\\left(x_{i}\\right) + - h_{d}^{2}f\\left(x_{i}-h_{s}\\right)} + { h_{s}h_{d}\\left(h_{d} + h_{s}\\right)} + + \\mathcal{O}\\left(\\frac{h_{d}h_{s}^{2} + + h_{s}h_{d}^{2}}{h_{d} + + h_{s}}\\right) + + It is worth noting that if :math:`h_{s}=h_{d}` + (i.e., data are evenly spaced) + we find the standard second order approximation: + + .. math:: + + \\hat f_{i}^{(1)}= + \\frac{f\\left(x_{i+1}\\right) - f\\left(x_{i-1}\\right)}{2h} + + \\mathcal{O}\\left(h^{2}\\right) + + With a similar procedure the forward/backward approximations used for + boundaries can be derived. + + References + ---------- + .. [1] Quarteroni A., Sacco R., Saleri F. (2007) Numerical Mathematics + (Texts in Applied Mathematics). New York: Springer. + .. [2] Durran D. R. (1999) Numerical Methods for Wave Equations + in Geophysical Fluid Dynamics. New York: Springer. + .. [3] Fornberg B. (1988) Generation of Finite Difference Formulas on + Arbitrarily Spaced Grids, + Mathematics of Computation 51, no. 184 : 699-706. + `PDF `_. + """ + f = np.asanyarray(f) + N = f.ndim # number of dimensions + + if axis is None: + axes = tuple(range(N)) + else: + axes = _nx.normalize_axis_tuple(axis, N) + + len_axes = len(axes) + n = len(varargs) + if n == 0: + # no spacing argument - use 1 in all axes + dx = [1.0] * len_axes + elif n == 1 and np.ndim(varargs[0]) == 0: + # single scalar for all axes + dx = varargs * len_axes + elif n == len_axes: + # scalar or 1d array for each axis + dx = list(varargs) + for i, distances in enumerate(dx): + distances = np.asanyarray(distances) + if distances.ndim == 0: + continue + elif distances.ndim != 1: + raise ValueError("distances must be either scalars or 1d") + if len(distances) != f.shape[axes[i]]: + raise ValueError("when 1d, distances must match " + "the length of the corresponding dimension") + if np.issubdtype(distances.dtype, np.integer): + # Convert numpy integer types to float64 to avoid modular + # arithmetic in np.diff(distances). + distances = distances.astype(np.float64) + diffx = np.diff(distances) + # if distances are constant reduce to the scalar case + # since it brings a consistent speedup + if (diffx == diffx[0]).all(): + diffx = diffx[0] + dx[i] = diffx + else: + raise TypeError("invalid number of arguments") + + if edge_order > 2: + raise ValueError("'edge_order' greater than 2 not supported") + + # use central differences on interior and one-sided differences on the + # endpoints. This preserves second order-accuracy over the full domain. + + outvals = [] + + # create slice objects --- initially all are [:, :, ..., :] + slice1 = [slice(None)]*N + slice2 = [slice(None)]*N + slice3 = [slice(None)]*N + slice4 = [slice(None)]*N + + otype = f.dtype + if otype.type is np.datetime64: + # the timedelta dtype with the same unit information + otype = np.dtype(otype.name.replace('datetime', 'timedelta')) + # view as timedelta to allow addition + f = f.view(otype) + elif otype.type is np.timedelta64: + pass + elif np.issubdtype(otype, np.inexact): + pass + else: + # All other types convert to floating point. + # First check if f is a numpy integer type; if so, convert f to float64 + # to avoid modular arithmetic when computing the changes in f. + if np.issubdtype(otype, np.integer): + f = f.astype(np.float64) + otype = np.float64 + + for axis, ax_dx in zip(axes, dx): + if f.shape[axis] < edge_order + 1: + raise ValueError( + "Shape of array too small to calculate a numerical gradient, " + "at least (edge_order + 1) elements are required.") + # result allocation + out = np.empty_like(f, dtype=otype) + + # spacing for the current axis + uniform_spacing = np.ndim(ax_dx) == 0 + + # Numerical differentiation: 2nd order interior + slice1[axis] = slice(1, -1) + slice2[axis] = slice(None, -2) + slice3[axis] = slice(1, -1) + slice4[axis] = slice(2, None) + + if uniform_spacing: + out[tuple(slice1)] = (f[tuple(slice4)] - f[tuple(slice2)]) / (2. * ax_dx) + else: + dx1 = ax_dx[0:-1] + dx2 = ax_dx[1:] + a = -(dx2)/(dx1 * (dx1 + dx2)) + b = (dx2 - dx1) / (dx1 * dx2) + c = dx1 / (dx2 * (dx1 + dx2)) + # fix the shape for broadcasting + shape = np.ones(N, dtype=int) + shape[axis] = -1 + a.shape = b.shape = c.shape = shape + # 1D equivalent -- out[1:-1] = a * f[:-2] + b * f[1:-1] + c * f[2:] + out[tuple(slice1)] = a * f[tuple(slice2)] + b * f[tuple(slice3)] + c * f[tuple(slice4)] + + # Numerical differentiation: 1st order edges + if edge_order == 1: + slice1[axis] = 0 + slice2[axis] = 1 + slice3[axis] = 0 + dx_0 = ax_dx if uniform_spacing else ax_dx[0] + # 1D equivalent -- out[0] = (f[1] - f[0]) / (x[1] - x[0]) + out[tuple(slice1)] = (f[tuple(slice2)] - f[tuple(slice3)]) / dx_0 + + slice1[axis] = -1 + slice2[axis] = -1 + slice3[axis] = -2 + dx_n = ax_dx if uniform_spacing else ax_dx[-1] + # 1D equivalent -- out[-1] = (f[-1] - f[-2]) / (x[-1] - x[-2]) + out[tuple(slice1)] = (f[tuple(slice2)] - f[tuple(slice3)]) / dx_n + + # Numerical differentiation: 2nd order edges + else: + slice1[axis] = 0 + slice2[axis] = 0 + slice3[axis] = 1 + slice4[axis] = 2 + if uniform_spacing: + a = -1.5 / ax_dx + b = 2. / ax_dx + c = -0.5 / ax_dx + else: + dx1 = ax_dx[0] + dx2 = ax_dx[1] + a = -(2. * dx1 + dx2)/(dx1 * (dx1 + dx2)) + b = (dx1 + dx2) / (dx1 * dx2) + c = - dx1 / (dx2 * (dx1 + dx2)) + # 1D equivalent -- out[0] = a * f[0] + b * f[1] + c * f[2] + out[tuple(slice1)] = a * f[tuple(slice2)] + b * f[tuple(slice3)] + c * f[tuple(slice4)] + + slice1[axis] = -1 + slice2[axis] = -3 + slice3[axis] = -2 + slice4[axis] = -1 + if uniform_spacing: + a = 0.5 / ax_dx + b = -2. / ax_dx + c = 1.5 / ax_dx + else: + dx1 = ax_dx[-2] + dx2 = ax_dx[-1] + a = (dx2) / (dx1 * (dx1 + dx2)) + b = - (dx2 + dx1) / (dx1 * dx2) + c = (2. * dx2 + dx1) / (dx2 * (dx1 + dx2)) + # 1D equivalent -- out[-1] = a * f[-3] + b * f[-2] + c * f[-1] + out[tuple(slice1)] = a * f[tuple(slice2)] + b * f[tuple(slice3)] + c * f[tuple(slice4)] + + outvals.append(out) + + # reset the slice object in this dimension to ":" + slice1[axis] = slice(None) + slice2[axis] = slice(None) + slice3[axis] = slice(None) + slice4[axis] = slice(None) + + if len_axes == 1: + return outvals[0] + return tuple(outvals) + + +def _diff_dispatcher(a, n=None, axis=None, prepend=None, append=None): + return (a, prepend, append) + + +@array_function_dispatch(_diff_dispatcher) +def diff(a, n=1, axis=-1, prepend=np._NoValue, append=np._NoValue): + """ + Calculate the n-th discrete difference along the given axis. + + The first difference is given by ``out[i] = a[i+1] - a[i]`` along + the given axis, higher differences are calculated by using `diff` + recursively. + + Parameters + ---------- + a : array_like + Input array + n : int, optional + The number of times values are differenced. If zero, the input + is returned as-is. + axis : int, optional + The axis along which the difference is taken, default is the + last axis. + prepend, append : array_like, optional + Values to prepend or append to `a` along axis prior to + performing the difference. Scalar values are expanded to + arrays with length 1 in the direction of axis and the shape + of the input array in along all other axes. Otherwise the + dimension and shape must match `a` except along axis. + + .. versionadded:: 1.16.0 + + Returns + ------- + diff : ndarray + The n-th differences. The shape of the output is the same as `a` + except along `axis` where the dimension is smaller by `n`. The + type of the output is the same as the type of the difference + between any two elements of `a`. This is the same as the type of + `a` in most cases. A notable exception is `datetime64`, which + results in a `timedelta64` output array. + + See Also + -------- + gradient, ediff1d, cumsum + + Notes + ----- + Type is preserved for boolean arrays, so the result will contain + `False` when consecutive elements are the same and `True` when they + differ. + + For unsigned integer arrays, the results will also be unsigned. This + should not be surprising, as the result is consistent with + calculating the difference directly: + + >>> u8_arr = np.array([1, 0], dtype=np.uint8) + >>> np.diff(u8_arr) + array([255], dtype=uint8) + >>> u8_arr[1,...] - u8_arr[0,...] + 255 + + If this is not desirable, then the array should be cast to a larger + integer type first: + + >>> i16_arr = u8_arr.astype(np.int16) + >>> np.diff(i16_arr) + array([-1], dtype=int16) + + Examples + -------- + >>> x = np.array([1, 2, 4, 7, 0]) + >>> np.diff(x) + array([ 1, 2, 3, -7]) + >>> np.diff(x, n=2) + array([ 1, 1, -10]) + + >>> x = np.array([[1, 3, 6, 10], [0, 5, 6, 8]]) + >>> np.diff(x) + array([[2, 3, 4], + [5, 1, 2]]) + >>> np.diff(x, axis=0) + array([[-1, 2, 0, -2]]) + + >>> x = np.arange('1066-10-13', '1066-10-16', dtype=np.datetime64) + >>> np.diff(x) + array([1, 1], dtype='timedelta64[D]') + + """ + if n == 0: + return a + if n < 0: + raise ValueError( + "order must be non-negative but got " + repr(n)) + + a = asanyarray(a) + nd = a.ndim + if nd == 0: + raise ValueError("diff requires input that is at least one dimensional") + axis = normalize_axis_index(axis, nd) + + combined = [] + if prepend is not np._NoValue: + prepend = np.asanyarray(prepend) + if prepend.ndim == 0: + shape = list(a.shape) + shape[axis] = 1 + prepend = np.broadcast_to(prepend, tuple(shape)) + combined.append(prepend) + + combined.append(a) + + if append is not np._NoValue: + append = np.asanyarray(append) + if append.ndim == 0: + shape = list(a.shape) + shape[axis] = 1 + append = np.broadcast_to(append, tuple(shape)) + combined.append(append) + + if len(combined) > 1: + a = np.concatenate(combined, axis) + + slice1 = [slice(None)] * nd + slice2 = [slice(None)] * nd + slice1[axis] = slice(1, None) + slice2[axis] = slice(None, -1) + slice1 = tuple(slice1) + slice2 = tuple(slice2) + + op = not_equal if a.dtype == np.bool else subtract + for _ in range(n): + a = op(a[slice1], a[slice2]) + + return a + + +def _interp_dispatcher(x, xp, fp, left=None, right=None, period=None): + return (x, xp, fp) + + +@array_function_dispatch(_interp_dispatcher) +def interp(x, xp, fp, left=None, right=None, period=None): + """ + One-dimensional linear interpolation for monotonically increasing sample points. + + Returns the one-dimensional piecewise linear interpolant to a function + with given discrete data points (`xp`, `fp`), evaluated at `x`. + + Parameters + ---------- + x : array_like + The x-coordinates at which to evaluate the interpolated values. + + xp : 1-D sequence of floats + The x-coordinates of the data points, must be increasing if argument + `period` is not specified. Otherwise, `xp` is internally sorted after + normalizing the periodic boundaries with ``xp = xp % period``. + + fp : 1-D sequence of float or complex + The y-coordinates of the data points, same length as `xp`. + + left : optional float or complex corresponding to fp + Value to return for `x < xp[0]`, default is `fp[0]`. + + right : optional float or complex corresponding to fp + Value to return for `x > xp[-1]`, default is `fp[-1]`. + + period : None or float, optional + A period for the x-coordinates. This parameter allows the proper + interpolation of angular x-coordinates. Parameters `left` and `right` + are ignored if `period` is specified. + + .. versionadded:: 1.10.0 + + Returns + ------- + y : float or complex (corresponding to fp) or ndarray + The interpolated values, same shape as `x`. + + Raises + ------ + ValueError + If `xp` and `fp` have different length + If `xp` or `fp` are not 1-D sequences + If `period == 0` + + See Also + -------- + scipy.interpolate + + Warnings + -------- + The x-coordinate sequence is expected to be increasing, but this is not + explicitly enforced. However, if the sequence `xp` is non-increasing, + interpolation results are meaningless. + + Note that, since NaN is unsortable, `xp` also cannot contain NaNs. + + A simple check for `xp` being strictly increasing is:: + + np.all(np.diff(xp) > 0) + + Examples + -------- + >>> xp = [1, 2, 3] + >>> fp = [3, 2, 0] + >>> np.interp(2.5, xp, fp) + 1.0 + >>> np.interp([0, 1, 1.5, 2.72, 3.14], xp, fp) + array([3. , 3. , 2.5 , 0.56, 0. ]) + >>> UNDEF = -99.0 + >>> np.interp(3.14, xp, fp, right=UNDEF) + -99.0 + + Plot an interpolant to the sine function: + + >>> x = np.linspace(0, 2*np.pi, 10) + >>> y = np.sin(x) + >>> xvals = np.linspace(0, 2*np.pi, 50) + >>> yinterp = np.interp(xvals, x, y) + >>> import matplotlib.pyplot as plt + >>> plt.plot(x, y, 'o') + [] + >>> plt.plot(xvals, yinterp, '-x') + [] + >>> plt.show() + + Interpolation with periodic x-coordinates: + + >>> x = [-180, -170, -185, 185, -10, -5, 0, 365] + >>> xp = [190, -190, 350, -350] + >>> fp = [5, 10, 3, 4] + >>> np.interp(x, xp, fp, period=360) + array([7.5 , 5. , 8.75, 6.25, 3. , 3.25, 3.5 , 3.75]) + + Complex interpolation: + + >>> x = [1.5, 4.0] + >>> xp = [2,3,5] + >>> fp = [1.0j, 0, 2+3j] + >>> np.interp(x, xp, fp) + array([0.+1.j , 1.+1.5j]) + + """ + + fp = np.asarray(fp) + + if np.iscomplexobj(fp): + interp_func = compiled_interp_complex + input_dtype = np.complex128 + else: + interp_func = compiled_interp + input_dtype = np.float64 + + if period is not None: + if period == 0: + raise ValueError("period must be a non-zero value") + period = abs(period) + left = None + right = None + + x = np.asarray(x, dtype=np.float64) + xp = np.asarray(xp, dtype=np.float64) + fp = np.asarray(fp, dtype=input_dtype) + + if xp.ndim != 1 or fp.ndim != 1: + raise ValueError("Data points must be 1-D sequences") + if xp.shape[0] != fp.shape[0]: + raise ValueError("fp and xp are not of the same length") + # normalizing periodic boundaries + x = x % period + xp = xp % period + asort_xp = np.argsort(xp) + xp = xp[asort_xp] + fp = fp[asort_xp] + xp = np.concatenate((xp[-1:]-period, xp, xp[0:1]+period)) + fp = np.concatenate((fp[-1:], fp, fp[0:1])) + + return interp_func(x, xp, fp, left, right) + + +def _angle_dispatcher(z, deg=None): + return (z,) + + +@array_function_dispatch(_angle_dispatcher) +def angle(z, deg=False): + """ + Return the angle of the complex argument. + + Parameters + ---------- + z : array_like + A complex number or sequence of complex numbers. + deg : bool, optional + Return angle in degrees if True, radians if False (default). + + Returns + ------- + angle : ndarray or scalar + The counterclockwise angle from the positive real axis on the complex + plane in the range ``(-pi, pi]``, with dtype as numpy.float64. + + .. versionchanged:: 1.16.0 + This function works on subclasses of ndarray like `ma.array`. + + See Also + -------- + arctan2 + absolute + + Notes + ----- + This function passes the imaginary and real parts of the argument to + `arctan2` to compute the result; consequently, it follows the convention + of `arctan2` when the magnitude of the argument is zero. See example. + + Examples + -------- + >>> np.angle([1.0, 1.0j, 1+1j]) # in radians + array([ 0. , 1.57079633, 0.78539816]) # may vary + >>> np.angle(1+1j, deg=True) # in degrees + 45.0 + >>> np.angle([0., -0., complex(0., -0.), complex(-0., -0.)]) # convention + array([ 0. , 3.14159265, -0. , -3.14159265]) + + """ + z = asanyarray(z) + if issubclass(z.dtype.type, _nx.complexfloating): + zimag = z.imag + zreal = z.real + else: + zimag = 0 + zreal = z + + a = arctan2(zimag, zreal) + if deg: + a *= 180/pi + return a + + +def _unwrap_dispatcher(p, discont=None, axis=None, *, period=None): + return (p,) + + +@array_function_dispatch(_unwrap_dispatcher) +def unwrap(p, discont=None, axis=-1, *, period=2*pi): + r""" + Unwrap by taking the complement of large deltas with respect to the period. + + This unwraps a signal `p` by changing elements which have an absolute + difference from their predecessor of more than ``max(discont, period/2)`` + to their `period`-complementary values. + + For the default case where `period` is :math:`2\pi` and `discont` is + :math:`\pi`, this unwraps a radian phase `p` such that adjacent differences + are never greater than :math:`\pi` by adding :math:`2k\pi` for some + integer :math:`k`. + + Parameters + ---------- + p : array_like + Input array. + discont : float, optional + Maximum discontinuity between values, default is ``period/2``. + Values below ``period/2`` are treated as if they were ``period/2``. + To have an effect different from the default, `discont` should be + larger than ``period/2``. + axis : int, optional + Axis along which unwrap will operate, default is the last axis. + period : float, optional + Size of the range over which the input wraps. By default, it is + ``2 pi``. + + .. versionadded:: 1.21.0 + + Returns + ------- + out : ndarray + Output array. + + See Also + -------- + rad2deg, deg2rad + + Notes + ----- + If the discontinuity in `p` is smaller than ``period/2``, + but larger than `discont`, no unwrapping is done because taking + the complement would only make the discontinuity larger. + + Examples + -------- + >>> phase = np.linspace(0, np.pi, num=5) + >>> phase[3:] += np.pi + >>> phase + array([ 0. , 0.78539816, 1.57079633, 5.49778714, 6.28318531]) # may vary + >>> np.unwrap(phase) + array([ 0. , 0.78539816, 1.57079633, -0.78539816, 0. ]) # may vary + >>> np.unwrap([0, 1, 2, -1, 0], period=4) + array([0, 1, 2, 3, 4]) + >>> np.unwrap([ 1, 2, 3, 4, 5, 6, 1, 2, 3], period=6) + array([1, 2, 3, 4, 5, 6, 7, 8, 9]) + >>> np.unwrap([2, 3, 4, 5, 2, 3, 4, 5], period=4) + array([2, 3, 4, 5, 6, 7, 8, 9]) + >>> phase_deg = np.mod(np.linspace(0 ,720, 19), 360) - 180 + >>> np.unwrap(phase_deg, period=360) + array([-180., -140., -100., -60., -20., 20., 60., 100., 140., + 180., 220., 260., 300., 340., 380., 420., 460., 500., + 540.]) + """ + p = asarray(p) + nd = p.ndim + dd = diff(p, axis=axis) + if discont is None: + discont = period/2 + slice1 = [slice(None, None)]*nd # full slices + slice1[axis] = slice(1, None) + slice1 = tuple(slice1) + dtype = np.result_type(dd, period) + if _nx.issubdtype(dtype, _nx.integer): + interval_high, rem = divmod(period, 2) + boundary_ambiguous = rem == 0 + else: + interval_high = period / 2 + boundary_ambiguous = True + interval_low = -interval_high + ddmod = mod(dd - interval_low, period) + interval_low + if boundary_ambiguous: + # for `mask = (abs(dd) == period/2)`, the above line made + # `ddmod[mask] == -period/2`. correct these such that + # `ddmod[mask] == sign(dd[mask])*period/2`. + _nx.copyto(ddmod, interval_high, + where=(ddmod == interval_low) & (dd > 0)) + ph_correct = ddmod - dd + _nx.copyto(ph_correct, 0, where=abs(dd) < discont) + up = array(p, copy=True, dtype=dtype) + up[slice1] = p[slice1] + ph_correct.cumsum(axis) + return up + + +def _sort_complex(a): + return (a,) + + +@array_function_dispatch(_sort_complex) +def sort_complex(a): + """ + Sort a complex array using the real part first, then the imaginary part. + + Parameters + ---------- + a : array_like + Input array + + Returns + ------- + out : complex ndarray + Always returns a sorted complex array. + + Examples + -------- + >>> np.sort_complex([5, 3, 6, 2, 1]) + array([1.+0.j, 2.+0.j, 3.+0.j, 5.+0.j, 6.+0.j]) + + >>> np.sort_complex([1 + 2j, 2 - 1j, 3 - 2j, 3 - 3j, 3 + 5j]) + array([1.+2.j, 2.-1.j, 3.-3.j, 3.-2.j, 3.+5.j]) + + """ + b = array(a, copy=True) + b.sort() + if not issubclass(b.dtype.type, _nx.complexfloating): + if b.dtype.char in 'bhBH': + return b.astype('F') + elif b.dtype.char == 'g': + return b.astype('G') + else: + return b.astype('D') + else: + return b + + +def _trim_zeros(filt, trim=None): + return (filt,) + + +@array_function_dispatch(_trim_zeros) +def trim_zeros(filt, trim='fb'): + """ + Trim the leading and/or trailing zeros from a 1-D array or sequence. + + Parameters + ---------- + filt : 1-D array or sequence + Input array. + trim : str, optional + A string with 'f' representing trim from front and 'b' to trim from + back. Default is 'fb', trim zeros from both front and back of the + array. + + Returns + ------- + trimmed : 1-D array or sequence + The result of trimming the input. The input data type is preserved. + + Examples + -------- + >>> a = np.array((0, 0, 0, 1, 2, 3, 0, 2, 1, 0)) + >>> np.trim_zeros(a) + array([1, 2, 3, 0, 2, 1]) + + >>> np.trim_zeros(a, 'b') + array([0, 0, 0, ..., 0, 2, 1]) + + The input data type is preserved, list/tuple in means list/tuple out. + + >>> np.trim_zeros([0, 1, 2, 0]) + [1, 2] + + """ + + first = 0 + trim = trim.upper() + if 'F' in trim: + for i in filt: + if i != 0.: + break + else: + first = first + 1 + last = len(filt) + if 'B' in trim: + for i in filt[::-1]: + if i != 0.: + break + else: + last = last - 1 + return filt[first:last] + + +def _extract_dispatcher(condition, arr): + return (condition, arr) + + +@array_function_dispatch(_extract_dispatcher) +def extract(condition, arr): + """ + Return the elements of an array that satisfy some condition. + + This is equivalent to ``np.compress(ravel(condition), ravel(arr))``. If + `condition` is boolean ``np.extract`` is equivalent to ``arr[condition]``. + + Note that `place` does the exact opposite of `extract`. + + Parameters + ---------- + condition : array_like + An array whose nonzero or True entries indicate the elements of `arr` + to extract. + arr : array_like + Input array of the same size as `condition`. + + Returns + ------- + extract : ndarray + Rank 1 array of values from `arr` where `condition` is True. + + See Also + -------- + take, put, copyto, compress, place + + Examples + -------- + >>> arr = np.arange(12).reshape((3, 4)) + >>> arr + array([[ 0, 1, 2, 3], + [ 4, 5, 6, 7], + [ 8, 9, 10, 11]]) + >>> condition = np.mod(arr, 3)==0 + >>> condition + array([[ True, False, False, True], + [False, False, True, False], + [False, True, False, False]]) + >>> np.extract(condition, arr) + array([0, 3, 6, 9]) + + + If `condition` is boolean: + + >>> arr[condition] + array([0, 3, 6, 9]) + + """ + return _nx.take(ravel(arr), nonzero(ravel(condition))[0]) + + +def _place_dispatcher(arr, mask, vals): + return (arr, mask, vals) + + +@array_function_dispatch(_place_dispatcher) +def place(arr, mask, vals): + """ + Change elements of an array based on conditional and input values. + + Similar to ``np.copyto(arr, vals, where=mask)``, the difference is that + `place` uses the first N elements of `vals`, where N is the number of + True values in `mask`, while `copyto` uses the elements where `mask` + is True. + + Note that `extract` does the exact opposite of `place`. + + Parameters + ---------- + arr : ndarray + Array to put data into. + mask : array_like + Boolean mask array. Must have the same size as `a`. + vals : 1-D sequence + Values to put into `a`. Only the first N elements are used, where + N is the number of True values in `mask`. If `vals` is smaller + than N, it will be repeated, and if elements of `a` are to be masked, + this sequence must be non-empty. + + See Also + -------- + copyto, put, take, extract + + Examples + -------- + >>> arr = np.arange(6).reshape(2, 3) + >>> np.place(arr, arr>2, [44, 55]) + >>> arr + array([[ 0, 1, 2], + [44, 55, 44]]) + + """ + return _place(arr, mask, vals) + + +def disp(mesg, device=None, linefeed=True): + """ + Display a message on a device. + + .. deprecated:: 2.0 + Use your own printing function instead. + + Parameters + ---------- + mesg : str + Message to display. + device : object + Device to write message. If None, defaults to ``sys.stdout`` which is + very similar to ``print``. `device` needs to have ``write()`` and + ``flush()`` methods. + linefeed : bool, optional + Option whether to print a line feed or not. Defaults to True. + + Raises + ------ + AttributeError + If `device` does not have a ``write()`` or ``flush()`` method. + + Examples + -------- + Besides ``sys.stdout``, a file-like object can also be used as it has + both required methods: + + >>> from io import StringIO + >>> buf = StringIO() + >>> np.disp('"Display" in a file', device=buf) + >>> buf.getvalue() + '"Display" in a file\\n' + + """ + + # Deprecated in NumPy 2.0, 2023-07-11 + warnings.warn( + "`disp` is deprecated, " + "use your own printing function instead. " + "(deprecated in NumPy 2.0)", + DeprecationWarning, + stacklevel=2 + ) + + if device is None: + device = sys.stdout + if linefeed: + device.write('%s\n' % mesg) + else: + device.write('%s' % mesg) + device.flush() + return + + +# See https://docs.scipy.org/doc/numpy/reference/c-api.generalized-ufuncs.html +_DIMENSION_NAME = r'\w+' +_CORE_DIMENSION_LIST = '(?:{0:}(?:,{0:})*)?'.format(_DIMENSION_NAME) +_ARGUMENT = r'\({}\)'.format(_CORE_DIMENSION_LIST) +_ARGUMENT_LIST = '{0:}(?:,{0:})*'.format(_ARGUMENT) +_SIGNATURE = '^{0:}->{0:}$'.format(_ARGUMENT_LIST) + + +def _parse_gufunc_signature(signature): + """ + Parse string signatures for a generalized universal function. + + Arguments + --------- + signature : string + Generalized universal function signature, e.g., ``(m,n),(n,p)->(m,p)`` + for ``np.matmul``. + + Returns + ------- + Tuple of input and output core dimensions parsed from the signature, each + of the form List[Tuple[str, ...]]. + """ + signature = re.sub(r'\s+', '', signature) + + if not re.match(_SIGNATURE, signature): + raise ValueError( + 'not a valid gufunc signature: {}'.format(signature)) + return tuple([tuple(re.findall(_DIMENSION_NAME, arg)) + for arg in re.findall(_ARGUMENT, arg_list)] + for arg_list in signature.split('->')) + + +def _update_dim_sizes(dim_sizes, arg, core_dims): + """ + Incrementally check and update core dimension sizes for a single argument. + + Arguments + --------- + dim_sizes : Dict[str, int] + Sizes of existing core dimensions. Will be updated in-place. + arg : ndarray + Argument to examine. + core_dims : Tuple[str, ...] + Core dimensions for this argument. + """ + if not core_dims: + return + + num_core_dims = len(core_dims) + if arg.ndim < num_core_dims: + raise ValueError( + '%d-dimensional argument does not have enough ' + 'dimensions for all core dimensions %r' + % (arg.ndim, core_dims)) + + core_shape = arg.shape[-num_core_dims:] + for dim, size in zip(core_dims, core_shape): + if dim in dim_sizes: + if size != dim_sizes[dim]: + raise ValueError( + 'inconsistent size for core dimension %r: %r vs %r' + % (dim, size, dim_sizes[dim])) + else: + dim_sizes[dim] = size + + +def _parse_input_dimensions(args, input_core_dims): + """ + Parse broadcast and core dimensions for vectorize with a signature. + + Arguments + --------- + args : Tuple[ndarray, ...] + Tuple of input arguments to examine. + input_core_dims : List[Tuple[str, ...]] + List of core dimensions corresponding to each input. + + Returns + ------- + broadcast_shape : Tuple[int, ...] + Common shape to broadcast all non-core dimensions to. + dim_sizes : Dict[str, int] + Common sizes for named core dimensions. + """ + broadcast_args = [] + dim_sizes = {} + for arg, core_dims in zip(args, input_core_dims): + _update_dim_sizes(dim_sizes, arg, core_dims) + ndim = arg.ndim - len(core_dims) + dummy_array = np.lib.stride_tricks.as_strided(0, arg.shape[:ndim]) + broadcast_args.append(dummy_array) + broadcast_shape = np.lib._stride_tricks_impl._broadcast_shape( + *broadcast_args + ) + return broadcast_shape, dim_sizes + + +def _calculate_shapes(broadcast_shape, dim_sizes, list_of_core_dims): + """Helper for calculating broadcast shapes with core dimensions.""" + return [broadcast_shape + tuple(dim_sizes[dim] for dim in core_dims) + for core_dims in list_of_core_dims] + + +def _create_arrays(broadcast_shape, dim_sizes, list_of_core_dims, dtypes, + results=None): + """Helper for creating output arrays in vectorize.""" + shapes = _calculate_shapes(broadcast_shape, dim_sizes, list_of_core_dims) + if dtypes is None: + dtypes = [None] * len(shapes) + if results is None: + arrays = tuple(np.empty(shape=shape, dtype=dtype) + for shape, dtype in zip(shapes, dtypes)) + else: + arrays = tuple(np.empty_like(result, shape=shape, dtype=dtype) + for result, shape, dtype + in zip(results, shapes, dtypes)) + return arrays + + +def _get_vectorize_dtype(dtype): + if dtype.char in "SU": + return dtype.char + return dtype + + +@set_module('numpy') +class vectorize: + """ + vectorize(pyfunc=np._NoValue, otypes=None, doc=None, excluded=None, + cache=False, signature=None) + + Returns an object that acts like pyfunc, but takes arrays as input. + + Define a vectorized function which takes a nested sequence of objects or + numpy arrays as inputs and returns a single numpy array or a tuple of numpy + arrays. The vectorized function evaluates `pyfunc` over successive tuples + of the input arrays like the python map function, except it uses the + broadcasting rules of numpy. + + The data type of the output of `vectorized` is determined by calling + the function with the first element of the input. This can be avoided + by specifying the `otypes` argument. + + Parameters + ---------- + pyfunc : callable, optional + A python function or method. + Can be omitted to produce a decorator with keyword arguments. + otypes : str or list of dtypes, optional + The output data type. It must be specified as either a string of + typecode characters or a list of data type specifiers. There should + be one data type specifier for each output. + doc : str, optional + The docstring for the function. If None, the docstring will be the + ``pyfunc.__doc__``. + excluded : set, optional + Set of strings or integers representing the positional or keyword + arguments for which the function will not be vectorized. These will be + passed directly to `pyfunc` unmodified. + + .. versionadded:: 1.7.0 + + cache : bool, optional + If `True`, then cache the first function call that determines the number + of outputs if `otypes` is not provided. + + .. versionadded:: 1.7.0 + + signature : string, optional + Generalized universal function signature, e.g., ``(m,n),(n)->(m)`` for + vectorized matrix-vector multiplication. If provided, ``pyfunc`` will + be called with (and expected to return) arrays with shapes given by the + size of corresponding core dimensions. By default, ``pyfunc`` is + assumed to take scalars as input and output. + + .. versionadded:: 1.12.0 + + Returns + ------- + out : callable + A vectorized function if ``pyfunc`` was provided, + a decorator otherwise. + + See Also + -------- + frompyfunc : Takes an arbitrary Python function and returns a ufunc + + Notes + ----- + The `vectorize` function is provided primarily for convenience, not for + performance. The implementation is essentially a for loop. + + If `otypes` is not specified, then a call to the function with the + first argument will be used to determine the number of outputs. The + results of this call will be cached if `cache` is `True` to prevent + calling the function twice. However, to implement the cache, the + original function must be wrapped which will slow down subsequent + calls, so only do this if your function is expensive. + + The new keyword argument interface and `excluded` argument support + further degrades performance. + + References + ---------- + .. [1] :doc:`/reference/c-api/generalized-ufuncs` + + Examples + -------- + >>> def myfunc(a, b): + ... "Return a-b if a>b, otherwise return a+b" + ... if a > b: + ... return a - b + ... else: + ... return a + b + + >>> vfunc = np.vectorize(myfunc) + >>> vfunc([1, 2, 3, 4], 2) + array([3, 4, 1, 2]) + + The docstring is taken from the input function to `vectorize` unless it + is specified: + + >>> vfunc.__doc__ + 'Return a-b if a>b, otherwise return a+b' + >>> vfunc = np.vectorize(myfunc, doc='Vectorized `myfunc`') + >>> vfunc.__doc__ + 'Vectorized `myfunc`' + + The output type is determined by evaluating the first element of the input, + unless it is specified: + + >>> out = vfunc([1, 2, 3, 4], 2) + >>> type(out[0]) + + >>> vfunc = np.vectorize(myfunc, otypes=[float]) + >>> out = vfunc([1, 2, 3, 4], 2) + >>> type(out[0]) + + + The `excluded` argument can be used to prevent vectorizing over certain + arguments. This can be useful for array-like arguments of a fixed length + such as the coefficients for a polynomial as in `polyval`: + + >>> def mypolyval(p, x): + ... _p = list(p) + ... res = _p.pop(0) + ... while _p: + ... res = res*x + _p.pop(0) + ... return res + >>> vpolyval = np.vectorize(mypolyval, excluded=['p']) + >>> vpolyval(p=[1, 2, 3], x=[0, 1]) + array([3, 6]) + + Positional arguments may also be excluded by specifying their position: + + >>> vpolyval.excluded.add(0) + >>> vpolyval([1, 2, 3], x=[0, 1]) + array([3, 6]) + + The `signature` argument allows for vectorizing functions that act on + non-scalar arrays of fixed length. For example, you can use it for a + vectorized calculation of Pearson correlation coefficient and its p-value: + + >>> import scipy.stats + >>> pearsonr = np.vectorize(scipy.stats.pearsonr, + ... signature='(n),(n)->(),()') + >>> pearsonr([[0, 1, 2, 3]], [[1, 2, 3, 4], [4, 3, 2, 1]]) + (array([ 1., -1.]), array([ 0., 0.])) + + Or for a vectorized convolution: + + >>> convolve = np.vectorize(np.convolve, signature='(n),(m)->(k)') + >>> convolve(np.eye(4), [1, 2, 1]) + array([[1., 2., 1., 0., 0., 0.], + [0., 1., 2., 1., 0., 0.], + [0., 0., 1., 2., 1., 0.], + [0., 0., 0., 1., 2., 1.]]) + + Decorator syntax is supported. The decorator can be called as + a function to provide keyword arguments: + + >>> @np.vectorize + ... def identity(x): + ... return x + ... + >>> identity([0, 1, 2]) + array([0, 1, 2]) + >>> @np.vectorize(otypes=[float]) + ... def as_float(x): + ... return x + ... + >>> as_float([0, 1, 2]) + array([0., 1., 2.]) + """ + def __init__(self, pyfunc=np._NoValue, otypes=None, doc=None, + excluded=None, cache=False, signature=None): + + if (pyfunc != np._NoValue) and (not callable(pyfunc)): + #Splitting the error message to keep + #the length below 79 characters. + part1 = "When used as a decorator, " + part2 = "only accepts keyword arguments." + raise TypeError(part1 + part2) + + self.pyfunc = pyfunc + self.cache = cache + self.signature = signature + if pyfunc != np._NoValue and hasattr(pyfunc, '__name__'): + self.__name__ = pyfunc.__name__ + + self._ufunc = {} # Caching to improve default performance + self._doc = None + self.__doc__ = doc + if doc is None and hasattr(pyfunc, '__doc__'): + self.__doc__ = pyfunc.__doc__ + else: + self._doc = doc + + if isinstance(otypes, str): + for char in otypes: + if char not in typecodes['All']: + raise ValueError("Invalid otype specified: %s" % (char,)) + elif iterable(otypes): + otypes = [_get_vectorize_dtype(_nx.dtype(x)) for x in otypes] + elif otypes is not None: + raise ValueError("Invalid otype specification") + self.otypes = otypes + + # Excluded variable support + if excluded is None: + excluded = set() + self.excluded = set(excluded) + + if signature is not None: + self._in_and_out_core_dims = _parse_gufunc_signature(signature) + else: + self._in_and_out_core_dims = None + + def _init_stage_2(self, pyfunc, *args, **kwargs): + self.__name__ = pyfunc.__name__ + self.pyfunc = pyfunc + if self._doc is None: + self.__doc__ = pyfunc.__doc__ + else: + self.__doc__ = self._doc + + def _call_as_normal(self, *args, **kwargs): + """ + Return arrays with the results of `pyfunc` broadcast (vectorized) over + `args` and `kwargs` not in `excluded`. + """ + excluded = self.excluded + if not kwargs and not excluded: + func = self.pyfunc + vargs = args + else: + # The wrapper accepts only positional arguments: we use `names` and + # `inds` to mutate `the_args` and `kwargs` to pass to the original + # function. + nargs = len(args) + + names = [_n for _n in kwargs if _n not in excluded] + inds = [_i for _i in range(nargs) if _i not in excluded] + the_args = list(args) + + def func(*vargs): + for _n, _i in enumerate(inds): + the_args[_i] = vargs[_n] + kwargs.update(zip(names, vargs[len(inds):])) + return self.pyfunc(*the_args, **kwargs) + + vargs = [args[_i] for _i in inds] + vargs.extend([kwargs[_n] for _n in names]) + + return self._vectorize_call(func=func, args=vargs) + + def __call__(self, *args, **kwargs): + if self.pyfunc is np._NoValue: + self._init_stage_2(*args, **kwargs) + return self + + return self._call_as_normal(*args, **kwargs) + + def _get_ufunc_and_otypes(self, func, args): + """Return (ufunc, otypes).""" + # frompyfunc will fail if args is empty + if not args: + raise ValueError('args can not be empty') + + if self.otypes is not None: + otypes = self.otypes + + # self._ufunc is a dictionary whose keys are the number of + # arguments (i.e. len(args)) and whose values are ufuncs created + # by frompyfunc. len(args) can be different for different calls if + # self.pyfunc has parameters with default values. We only use the + # cache when func is self.pyfunc, which occurs when the call uses + # only positional arguments and no arguments are excluded. + + nin = len(args) + nout = len(self.otypes) + if func is not self.pyfunc or nin not in self._ufunc: + ufunc = frompyfunc(func, nin, nout) + else: + ufunc = None # We'll get it from self._ufunc + if func is self.pyfunc: + ufunc = self._ufunc.setdefault(nin, ufunc) + else: + # Get number of outputs and output types by calling the function on + # the first entries of args. We also cache the result to prevent + # the subsequent call when the ufunc is evaluated. + # Assumes that ufunc first evaluates the 0th elements in the input + # arrays (the input values are not checked to ensure this) + args = [asarray(arg) for arg in args] + if builtins.any(arg.size == 0 for arg in args): + raise ValueError('cannot call `vectorize` on size 0 inputs ' + 'unless `otypes` is set') + + inputs = [arg.flat[0] for arg in args] + outputs = func(*inputs) + + # Performance note: profiling indicates that -- for simple + # functions at least -- this wrapping can almost double the + # execution time. + # Hence we make it optional. + if self.cache: + _cache = [outputs] + + def _func(*vargs): + if _cache: + return _cache.pop() + else: + return func(*vargs) + else: + _func = func + + if isinstance(outputs, tuple): + nout = len(outputs) + else: + nout = 1 + outputs = (outputs,) + + otypes = ''.join([asarray(outputs[_k]).dtype.char + for _k in range(nout)]) + + # Performance note: profiling indicates that creating the ufunc is + # not a significant cost compared with wrapping so it seems not + # worth trying to cache this. + ufunc = frompyfunc(_func, len(args), nout) + + return ufunc, otypes + + def _vectorize_call(self, func, args): + """Vectorized call to `func` over positional `args`.""" + if self.signature is not None: + res = self._vectorize_call_with_signature(func, args) + elif not args: + res = func() + else: + ufunc, otypes = self._get_ufunc_and_otypes(func=func, args=args) + + # Convert args to object arrays first + inputs = [asanyarray(a, dtype=object) for a in args] + + outputs = ufunc(*inputs) + + if ufunc.nout == 1: + res = asanyarray(outputs, dtype=otypes[0]) + else: + res = tuple([asanyarray(x, dtype=t) + for x, t in zip(outputs, otypes)]) + return res + + def _vectorize_call_with_signature(self, func, args): + """Vectorized call over positional arguments with a signature.""" + input_core_dims, output_core_dims = self._in_and_out_core_dims + + if len(args) != len(input_core_dims): + raise TypeError('wrong number of positional arguments: ' + 'expected %r, got %r' + % (len(input_core_dims), len(args))) + args = tuple(asanyarray(arg) for arg in args) + + broadcast_shape, dim_sizes = _parse_input_dimensions( + args, input_core_dims) + input_shapes = _calculate_shapes(broadcast_shape, dim_sizes, + input_core_dims) + args = [np.broadcast_to(arg, shape, subok=True) + for arg, shape in zip(args, input_shapes)] + + outputs = None + otypes = self.otypes + nout = len(output_core_dims) + + for index in np.ndindex(*broadcast_shape): + results = func(*(arg[index] for arg in args)) + + n_results = len(results) if isinstance(results, tuple) else 1 + + if nout != n_results: + raise ValueError( + 'wrong number of outputs from pyfunc: expected %r, got %r' + % (nout, n_results)) + + if nout == 1: + results = (results,) + + if outputs is None: + for result, core_dims in zip(results, output_core_dims): + _update_dim_sizes(dim_sizes, result, core_dims) + + outputs = _create_arrays(broadcast_shape, dim_sizes, + output_core_dims, otypes, results) + + for output, result in zip(outputs, results): + output[index] = result + + if outputs is None: + # did not call the function even once + if otypes is None: + raise ValueError('cannot call `vectorize` on size 0 inputs ' + 'unless `otypes` is set') + if builtins.any(dim not in dim_sizes + for dims in output_core_dims + for dim in dims): + raise ValueError('cannot call `vectorize` with a signature ' + 'including new output dimensions on size 0 ' + 'inputs') + outputs = _create_arrays(broadcast_shape, dim_sizes, + output_core_dims, otypes) + + return outputs[0] if nout == 1 else outputs + + +def _cov_dispatcher(m, y=None, rowvar=None, bias=None, ddof=None, + fweights=None, aweights=None, *, dtype=None): + return (m, y, fweights, aweights) + + +@array_function_dispatch(_cov_dispatcher) +def cov(m, y=None, rowvar=True, bias=False, ddof=None, fweights=None, + aweights=None, *, dtype=None): + """ + Estimate a covariance matrix, given data and weights. + + Covariance indicates the level to which two variables vary together. + If we examine N-dimensional samples, :math:`X = [x_1, x_2, ... x_N]^T`, + then the covariance matrix element :math:`C_{ij}` is the covariance of + :math:`x_i` and :math:`x_j`. The element :math:`C_{ii}` is the variance + of :math:`x_i`. + + See the notes for an outline of the algorithm. + + Parameters + ---------- + m : array_like + A 1-D or 2-D array containing multiple variables and observations. + Each row of `m` represents a variable, and each column a single + observation of all those variables. Also see `rowvar` below. + y : array_like, optional + An additional set of variables and observations. `y` has the same form + as that of `m`. + rowvar : bool, optional + If `rowvar` is True (default), then each row represents a + variable, with observations in the columns. Otherwise, the relationship + is transposed: each column represents a variable, while the rows + contain observations. + bias : bool, optional + Default normalization (False) is by ``(N - 1)``, where ``N`` is the + number of observations given (unbiased estimate). If `bias` is True, + then normalization is by ``N``. These values can be overridden by using + the keyword ``ddof`` in numpy versions >= 1.5. + ddof : int, optional + If not ``None`` the default value implied by `bias` is overridden. + Note that ``ddof=1`` will return the unbiased estimate, even if both + `fweights` and `aweights` are specified, and ``ddof=0`` will return + the simple average. See the notes for the details. The default value + is ``None``. + + .. versionadded:: 1.5 + fweights : array_like, int, optional + 1-D array of integer frequency weights; the number of times each + observation vector should be repeated. + + .. versionadded:: 1.10 + aweights : array_like, optional + 1-D array of observation vector weights. These relative weights are + typically large for observations considered "important" and smaller for + observations considered less "important". If ``ddof=0`` the array of + weights can be used to assign probabilities to observation vectors. + + .. versionadded:: 1.10 + dtype : data-type, optional + Data-type of the result. By default, the return data-type will have + at least `numpy.float64` precision. + + .. versionadded:: 1.20 + + Returns + ------- + out : ndarray + The covariance matrix of the variables. + + See Also + -------- + corrcoef : Normalized covariance matrix + + Notes + ----- + Assume that the observations are in the columns of the observation + array `m` and let ``f = fweights`` and ``a = aweights`` for brevity. The + steps to compute the weighted covariance are as follows:: + + >>> m = np.arange(10, dtype=np.float64) + >>> f = np.arange(10) * 2 + >>> a = np.arange(10) ** 2. + >>> ddof = 1 + >>> w = f * a + >>> v1 = np.sum(w) + >>> v2 = np.sum(w * a) + >>> m -= np.sum(m * w, axis=None, keepdims=True) / v1 + >>> cov = np.dot(m * w, m.T) * v1 / (v1**2 - ddof * v2) + + Note that when ``a == 1``, the normalization factor + ``v1 / (v1**2 - ddof * v2)`` goes over to ``1 / (np.sum(f) - ddof)`` + as it should. + + Examples + -------- + Consider two variables, :math:`x_0` and :math:`x_1`, which + correlate perfectly, but in opposite directions: + + >>> x = np.array([[0, 2], [1, 1], [2, 0]]).T + >>> x + array([[0, 1, 2], + [2, 1, 0]]) + + Note how :math:`x_0` increases while :math:`x_1` decreases. The covariance + matrix shows this clearly: + + >>> np.cov(x) + array([[ 1., -1.], + [-1., 1.]]) + + Note that element :math:`C_{0,1}`, which shows the correlation between + :math:`x_0` and :math:`x_1`, is negative. + + Further, note how `x` and `y` are combined: + + >>> x = [-2.1, -1, 4.3] + >>> y = [3, 1.1, 0.12] + >>> X = np.stack((x, y), axis=0) + >>> np.cov(X) + array([[11.71 , -4.286 ], # may vary + [-4.286 , 2.144133]]) + >>> np.cov(x, y) + array([[11.71 , -4.286 ], # may vary + [-4.286 , 2.144133]]) + >>> np.cov(x) + array(11.71) + + """ + # Check inputs + if ddof is not None and ddof != int(ddof): + raise ValueError( + "ddof must be integer") + + # Handles complex arrays too + m = np.asarray(m) + if m.ndim > 2: + raise ValueError("m has more than 2 dimensions") + + if y is not None: + y = np.asarray(y) + if y.ndim > 2: + raise ValueError("y has more than 2 dimensions") + + if dtype is None: + if y is None: + dtype = np.result_type(m, np.float64) + else: + dtype = np.result_type(m, y, np.float64) + + X = array(m, ndmin=2, dtype=dtype) + if not rowvar and X.shape[0] != 1: + X = X.T + if X.shape[0] == 0: + return np.array([]).reshape(0, 0) + if y is not None: + y = array(y, copy=None, ndmin=2, dtype=dtype) + if not rowvar and y.shape[0] != 1: + y = y.T + X = np.concatenate((X, y), axis=0) + + if ddof is None: + if bias == 0: + ddof = 1 + else: + ddof = 0 + + # Get the product of frequencies and weights + w = None + if fweights is not None: + fweights = np.asarray(fweights, dtype=float) + if not np.all(fweights == np.around(fweights)): + raise TypeError( + "fweights must be integer") + if fweights.ndim > 1: + raise RuntimeError( + "cannot handle multidimensional fweights") + if fweights.shape[0] != X.shape[1]: + raise RuntimeError( + "incompatible numbers of samples and fweights") + if any(fweights < 0): + raise ValueError( + "fweights cannot be negative") + w = fweights + if aweights is not None: + aweights = np.asarray(aweights, dtype=float) + if aweights.ndim > 1: + raise RuntimeError( + "cannot handle multidimensional aweights") + if aweights.shape[0] != X.shape[1]: + raise RuntimeError( + "incompatible numbers of samples and aweights") + if any(aweights < 0): + raise ValueError( + "aweights cannot be negative") + if w is None: + w = aweights + else: + w *= aweights + + avg, w_sum = average(X, axis=1, weights=w, returned=True) + w_sum = w_sum[0] + + # Determine the normalization + if w is None: + fact = X.shape[1] - ddof + elif ddof == 0: + fact = w_sum + elif aweights is None: + fact = w_sum - ddof + else: + fact = w_sum - ddof*sum(w*aweights)/w_sum + + if fact <= 0: + warnings.warn("Degrees of freedom <= 0 for slice", + RuntimeWarning, stacklevel=2) + fact = 0.0 + + X -= avg[:, None] + if w is None: + X_T = X.T + else: + X_T = (X*w).T + c = dot(X, X_T.conj()) + c *= np.true_divide(1, fact) + return c.squeeze() + + +def _corrcoef_dispatcher(x, y=None, rowvar=None, bias=None, ddof=None, *, + dtype=None): + return (x, y) + + +@array_function_dispatch(_corrcoef_dispatcher) +def corrcoef(x, y=None, rowvar=True, bias=np._NoValue, ddof=np._NoValue, *, + dtype=None): + """ + Return Pearson product-moment correlation coefficients. + + Please refer to the documentation for `cov` for more detail. The + relationship between the correlation coefficient matrix, `R`, and the + covariance matrix, `C`, is + + .. math:: R_{ij} = \\frac{ C_{ij} } { \\sqrt{ C_{ii} C_{jj} } } + + The values of `R` are between -1 and 1, inclusive. + + Parameters + ---------- + x : array_like + A 1-D or 2-D array containing multiple variables and observations. + Each row of `x` represents a variable, and each column a single + observation of all those variables. Also see `rowvar` below. + y : array_like, optional + An additional set of variables and observations. `y` has the same + shape as `x`. + rowvar : bool, optional + If `rowvar` is True (default), then each row represents a + variable, with observations in the columns. Otherwise, the relationship + is transposed: each column represents a variable, while the rows + contain observations. + bias : _NoValue, optional + Has no effect, do not use. + + .. deprecated:: 1.10.0 + ddof : _NoValue, optional + Has no effect, do not use. + + .. deprecated:: 1.10.0 + dtype : data-type, optional + Data-type of the result. By default, the return data-type will have + at least `numpy.float64` precision. + + .. versionadded:: 1.20 + + Returns + ------- + R : ndarray + The correlation coefficient matrix of the variables. + + See Also + -------- + cov : Covariance matrix + + Notes + ----- + Due to floating point rounding the resulting array may not be Hermitian, + the diagonal elements may not be 1, and the elements may not satisfy the + inequality abs(a) <= 1. The real and imaginary parts are clipped to the + interval [-1, 1] in an attempt to improve on that situation but is not + much help in the complex case. + + This function accepts but discards arguments `bias` and `ddof`. This is + for backwards compatibility with previous versions of this function. These + arguments had no effect on the return values of the function and can be + safely ignored in this and previous versions of numpy. + + Examples + -------- + In this example we generate two random arrays, ``xarr`` and ``yarr``, and + compute the row-wise and column-wise Pearson correlation coefficients, + ``R``. Since ``rowvar`` is true by default, we first find the row-wise + Pearson correlation coefficients between the variables of ``xarr``. + + >>> import numpy as np + >>> rng = np.random.default_rng(seed=42) + >>> xarr = rng.random((3, 3)) + >>> xarr + array([[0.77395605, 0.43887844, 0.85859792], + [0.69736803, 0.09417735, 0.97562235], + [0.7611397 , 0.78606431, 0.12811363]]) + >>> R1 = np.corrcoef(xarr) + >>> R1 + array([[ 1. , 0.99256089, -0.68080986], + [ 0.99256089, 1. , -0.76492172], + [-0.68080986, -0.76492172, 1. ]]) + + If we add another set of variables and observations ``yarr``, we can + compute the row-wise Pearson correlation coefficients between the + variables in ``xarr`` and ``yarr``. + + >>> yarr = rng.random((3, 3)) + >>> yarr + array([[0.45038594, 0.37079802, 0.92676499], + [0.64386512, 0.82276161, 0.4434142 ], + [0.22723872, 0.55458479, 0.06381726]]) + >>> R2 = np.corrcoef(xarr, yarr) + >>> R2 + array([[ 1. , 0.99256089, -0.68080986, 0.75008178, -0.934284 , + -0.99004057], + [ 0.99256089, 1. , -0.76492172, 0.82502011, -0.97074098, + -0.99981569], + [-0.68080986, -0.76492172, 1. , -0.99507202, 0.89721355, + 0.77714685], + [ 0.75008178, 0.82502011, -0.99507202, 1. , -0.93657855, + -0.83571711], + [-0.934284 , -0.97074098, 0.89721355, -0.93657855, 1. , + 0.97517215], + [-0.99004057, -0.99981569, 0.77714685, -0.83571711, 0.97517215, + 1. ]]) + + Finally if we use the option ``rowvar=False``, the columns are now + being treated as the variables and we will find the column-wise Pearson + correlation coefficients between variables in ``xarr`` and ``yarr``. + + >>> R3 = np.corrcoef(xarr, yarr, rowvar=False) + >>> R3 + array([[ 1. , 0.77598074, -0.47458546, -0.75078643, -0.9665554 , + 0.22423734], + [ 0.77598074, 1. , -0.92346708, -0.99923895, -0.58826587, + -0.44069024], + [-0.47458546, -0.92346708, 1. , 0.93773029, 0.23297648, + 0.75137473], + [-0.75078643, -0.99923895, 0.93773029, 1. , 0.55627469, + 0.47536961], + [-0.9665554 , -0.58826587, 0.23297648, 0.55627469, 1. , + -0.46666491], + [ 0.22423734, -0.44069024, 0.75137473, 0.47536961, -0.46666491, + 1. ]]) + + """ + if bias is not np._NoValue or ddof is not np._NoValue: + # 2015-03-15, 1.10 + warnings.warn('bias and ddof have no effect and are deprecated', + DeprecationWarning, stacklevel=2) + c = cov(x, y, rowvar, dtype=dtype) + try: + d = diag(c) + except ValueError: + # scalar covariance + # nan if incorrect value (nan, inf, 0), 1 otherwise + return c / c + stddev = sqrt(d.real) + c /= stddev[:, None] + c /= stddev[None, :] + + # Clip real and imaginary parts to [-1, 1]. This does not guarantee + # abs(a[i,j]) <= 1 for complex arrays, but is the best we can do without + # excessive work. + np.clip(c.real, -1, 1, out=c.real) + if np.iscomplexobj(c): + np.clip(c.imag, -1, 1, out=c.imag) + + return c + + +@set_module('numpy') +def blackman(M): + """ + Return the Blackman window. + + The Blackman window is a taper formed by using the first three + terms of a summation of cosines. It was designed to have close to the + minimal leakage possible. It is close to optimal, only slightly worse + than a Kaiser window. + + Parameters + ---------- + M : int + Number of points in the output window. If zero or less, an empty + array is returned. + + Returns + ------- + out : ndarray + The window, with the maximum value normalized to one (the value one + appears only if the number of samples is odd). + + See Also + -------- + bartlett, hamming, hanning, kaiser + + Notes + ----- + The Blackman window is defined as + + .. math:: w(n) = 0.42 - 0.5 \\cos(2\\pi n/M) + 0.08 \\cos(4\\pi n/M) + + Most references to the Blackman window come from the signal processing + literature, where it is used as one of many windowing functions for + smoothing values. It is also known as an apodization (which means + "removing the foot", i.e. smoothing discontinuities at the beginning + and end of the sampled signal) or tapering function. It is known as a + "near optimal" tapering function, almost as good (by some measures) + as the kaiser window. + + References + ---------- + Blackman, R.B. and Tukey, J.W., (1958) The measurement of power spectra, + Dover Publications, New York. + + Oppenheim, A.V., and R.W. Schafer. Discrete-Time Signal Processing. + Upper Saddle River, NJ: Prentice-Hall, 1999, pp. 468-471. + + Examples + -------- + >>> import matplotlib.pyplot as plt + >>> np.blackman(12) + array([-1.38777878e-17, 3.26064346e-02, 1.59903635e-01, # may vary + 4.14397981e-01, 7.36045180e-01, 9.67046769e-01, + 9.67046769e-01, 7.36045180e-01, 4.14397981e-01, + 1.59903635e-01, 3.26064346e-02, -1.38777878e-17]) + + Plot the window and the frequency response. + + .. plot:: + :include-source: + + import matplotlib.pyplot as plt + from numpy.fft import fft, fftshift + window = np.blackman(51) + plt.plot(window) + plt.title("Blackman window") + plt.ylabel("Amplitude") + plt.xlabel("Sample") + plt.show() # doctest: +SKIP + + plt.figure() + A = fft(window, 2048) / 25.5 + mag = np.abs(fftshift(A)) + freq = np.linspace(-0.5, 0.5, len(A)) + with np.errstate(divide='ignore', invalid='ignore'): + response = 20 * np.log10(mag) + response = np.clip(response, -100, 100) + plt.plot(freq, response) + plt.title("Frequency response of Blackman window") + plt.ylabel("Magnitude [dB]") + plt.xlabel("Normalized frequency [cycles per sample]") + plt.axis('tight') + plt.show() + + """ + # Ensures at least float64 via 0.0. M should be an integer, but conversion + # to double is safe for a range. + values = np.array([0.0, M]) + M = values[1] + + if M < 1: + return array([], dtype=values.dtype) + if M == 1: + return ones(1, dtype=values.dtype) + n = arange(1-M, M, 2) + return 0.42 + 0.5*cos(pi*n/(M-1)) + 0.08*cos(2.0*pi*n/(M-1)) + + +@set_module('numpy') +def bartlett(M): + """ + Return the Bartlett window. + + The Bartlett window is very similar to a triangular window, except + that the end points are at zero. It is often used in signal + processing for tapering a signal, without generating too much + ripple in the frequency domain. + + Parameters + ---------- + M : int + Number of points in the output window. If zero or less, an + empty array is returned. + + Returns + ------- + out : array + The triangular window, with the maximum value normalized to one + (the value one appears only if the number of samples is odd), with + the first and last samples equal to zero. + + See Also + -------- + blackman, hamming, hanning, kaiser + + Notes + ----- + The Bartlett window is defined as + + .. math:: w(n) = \\frac{2}{M-1} \\left( + \\frac{M-1}{2} - \\left|n - \\frac{M-1}{2}\\right| + \\right) + + Most references to the Bartlett window come from the signal processing + literature, where it is used as one of many windowing functions for + smoothing values. Note that convolution with this window produces linear + interpolation. It is also known as an apodization (which means "removing + the foot", i.e. smoothing discontinuities at the beginning and end of the + sampled signal) or tapering function. The Fourier transform of the + Bartlett window is the product of two sinc functions. Note the excellent + discussion in Kanasewich [2]_. + + References + ---------- + .. [1] M.S. Bartlett, "Periodogram Analysis and Continuous Spectra", + Biometrika 37, 1-16, 1950. + .. [2] E.R. Kanasewich, "Time Sequence Analysis in Geophysics", + The University of Alberta Press, 1975, pp. 109-110. + .. [3] A.V. Oppenheim and R.W. Schafer, "Discrete-Time Signal + Processing", Prentice-Hall, 1999, pp. 468-471. + .. [4] Wikipedia, "Window function", + https://en.wikipedia.org/wiki/Window_function + .. [5] W.H. Press, B.P. Flannery, S.A. Teukolsky, and W.T. Vetterling, + "Numerical Recipes", Cambridge University Press, 1986, page 429. + + Examples + -------- + >>> import matplotlib.pyplot as plt + >>> np.bartlett(12) + array([ 0. , 0.18181818, 0.36363636, 0.54545455, 0.72727273, # may vary + 0.90909091, 0.90909091, 0.72727273, 0.54545455, 0.36363636, + 0.18181818, 0. ]) + + Plot the window and its frequency response (requires SciPy and matplotlib). + + .. plot:: + :include-source: + + import matplotlib.pyplot as plt + from numpy.fft import fft, fftshift + window = np.bartlett(51) + plt.plot(window) + plt.title("Bartlett window") + plt.ylabel("Amplitude") + plt.xlabel("Sample") + plt.show() + plt.figure() + A = fft(window, 2048) / 25.5 + mag = np.abs(fftshift(A)) + freq = np.linspace(-0.5, 0.5, len(A)) + with np.errstate(divide='ignore', invalid='ignore'): + response = 20 * np.log10(mag) + response = np.clip(response, -100, 100) + plt.plot(freq, response) + plt.title("Frequency response of Bartlett window") + plt.ylabel("Magnitude [dB]") + plt.xlabel("Normalized frequency [cycles per sample]") + plt.axis('tight') + plt.show() + + """ + # Ensures at least float64 via 0.0. M should be an integer, but conversion + # to double is safe for a range. + values = np.array([0.0, M]) + M = values[1] + + if M < 1: + return array([], dtype=values.dtype) + if M == 1: + return ones(1, dtype=values.dtype) + n = arange(1-M, M, 2) + return where(less_equal(n, 0), 1 + n/(M-1), 1 - n/(M-1)) + + +@set_module('numpy') +def hanning(M): + """ + Return the Hanning window. + + The Hanning window is a taper formed by using a weighted cosine. + + Parameters + ---------- + M : int + Number of points in the output window. If zero or less, an + empty array is returned. + + Returns + ------- + out : ndarray, shape(M,) + The window, with the maximum value normalized to one (the value + one appears only if `M` is odd). + + See Also + -------- + bartlett, blackman, hamming, kaiser + + Notes + ----- + The Hanning window is defined as + + .. math:: w(n) = 0.5 - 0.5\\cos\\left(\\frac{2\\pi{n}}{M-1}\\right) + \\qquad 0 \\leq n \\leq M-1 + + The Hanning was named for Julius von Hann, an Austrian meteorologist. + It is also known as the Cosine Bell. Some authors prefer that it be + called a Hann window, to help avoid confusion with the very similar + Hamming window. + + Most references to the Hanning window come from the signal processing + literature, where it is used as one of many windowing functions for + smoothing values. It is also known as an apodization (which means + "removing the foot", i.e. smoothing discontinuities at the beginning + and end of the sampled signal) or tapering function. + + References + ---------- + .. [1] Blackman, R.B. and Tukey, J.W., (1958) The measurement of power + spectra, Dover Publications, New York. + .. [2] E.R. Kanasewich, "Time Sequence Analysis in Geophysics", + The University of Alberta Press, 1975, pp. 106-108. + .. [3] Wikipedia, "Window function", + https://en.wikipedia.org/wiki/Window_function + .. [4] W.H. Press, B.P. Flannery, S.A. Teukolsky, and W.T. Vetterling, + "Numerical Recipes", Cambridge University Press, 1986, page 425. + + Examples + -------- + >>> np.hanning(12) + array([0. , 0.07937323, 0.29229249, 0.57115742, 0.82743037, + 0.97974649, 0.97974649, 0.82743037, 0.57115742, 0.29229249, + 0.07937323, 0. ]) + + Plot the window and its frequency response. + + .. plot:: + :include-source: + + import matplotlib.pyplot as plt + from numpy.fft import fft, fftshift + window = np.hanning(51) + plt.plot(window) + plt.title("Hann window") + plt.ylabel("Amplitude") + plt.xlabel("Sample") + plt.show() + + plt.figure() + A = fft(window, 2048) / 25.5 + mag = np.abs(fftshift(A)) + freq = np.linspace(-0.5, 0.5, len(A)) + with np.errstate(divide='ignore', invalid='ignore'): + response = 20 * np.log10(mag) + response = np.clip(response, -100, 100) + plt.plot(freq, response) + plt.title("Frequency response of the Hann window") + plt.ylabel("Magnitude [dB]") + plt.xlabel("Normalized frequency [cycles per sample]") + plt.axis('tight') + plt.show() + + """ + # Ensures at least float64 via 0.0. M should be an integer, but conversion + # to double is safe for a range. + values = np.array([0.0, M]) + M = values[1] + + if M < 1: + return array([], dtype=values.dtype) + if M == 1: + return ones(1, dtype=values.dtype) + n = arange(1-M, M, 2) + return 0.5 + 0.5*cos(pi*n/(M-1)) + + +@set_module('numpy') +def hamming(M): + """ + Return the Hamming window. + + The Hamming window is a taper formed by using a weighted cosine. + + Parameters + ---------- + M : int + Number of points in the output window. If zero or less, an + empty array is returned. + + Returns + ------- + out : ndarray + The window, with the maximum value normalized to one (the value + one appears only if the number of samples is odd). + + See Also + -------- + bartlett, blackman, hanning, kaiser + + Notes + ----- + The Hamming window is defined as + + .. math:: w(n) = 0.54 - 0.46\\cos\\left(\\frac{2\\pi{n}}{M-1}\\right) + \\qquad 0 \\leq n \\leq M-1 + + The Hamming was named for R. W. Hamming, an associate of J. W. Tukey + and is described in Blackman and Tukey. It was recommended for + smoothing the truncated autocovariance function in the time domain. + Most references to the Hamming window come from the signal processing + literature, where it is used as one of many windowing functions for + smoothing values. It is also known as an apodization (which means + "removing the foot", i.e. smoothing discontinuities at the beginning + and end of the sampled signal) or tapering function. + + References + ---------- + .. [1] Blackman, R.B. and Tukey, J.W., (1958) The measurement of power + spectra, Dover Publications, New York. + .. [2] E.R. Kanasewich, "Time Sequence Analysis in Geophysics", The + University of Alberta Press, 1975, pp. 109-110. + .. [3] Wikipedia, "Window function", + https://en.wikipedia.org/wiki/Window_function + .. [4] W.H. Press, B.P. Flannery, S.A. Teukolsky, and W.T. Vetterling, + "Numerical Recipes", Cambridge University Press, 1986, page 425. + + Examples + -------- + >>> np.hamming(12) + array([ 0.08 , 0.15302337, 0.34890909, 0.60546483, 0.84123594, # may vary + 0.98136677, 0.98136677, 0.84123594, 0.60546483, 0.34890909, + 0.15302337, 0.08 ]) + + Plot the window and the frequency response. + + .. plot:: + :include-source: + + import matplotlib.pyplot as plt + from numpy.fft import fft, fftshift + window = np.hamming(51) + plt.plot(window) + plt.title("Hamming window") + plt.ylabel("Amplitude") + plt.xlabel("Sample") + plt.show() + + plt.figure() + A = fft(window, 2048) / 25.5 + mag = np.abs(fftshift(A)) + freq = np.linspace(-0.5, 0.5, len(A)) + response = 20 * np.log10(mag) + response = np.clip(response, -100, 100) + plt.plot(freq, response) + plt.title("Frequency response of Hamming window") + plt.ylabel("Magnitude [dB]") + plt.xlabel("Normalized frequency [cycles per sample]") + plt.axis('tight') + plt.show() + + """ + # Ensures at least float64 via 0.0. M should be an integer, but conversion + # to double is safe for a range. + values = np.array([0.0, M]) + M = values[1] + + if M < 1: + return array([], dtype=values.dtype) + if M == 1: + return ones(1, dtype=values.dtype) + n = arange(1-M, M, 2) + return 0.54 + 0.46*cos(pi*n/(M-1)) + + +## Code from cephes for i0 + +_i0A = [ + -4.41534164647933937950E-18, + 3.33079451882223809783E-17, + -2.43127984654795469359E-16, + 1.71539128555513303061E-15, + -1.16853328779934516808E-14, + 7.67618549860493561688E-14, + -4.85644678311192946090E-13, + 2.95505266312963983461E-12, + -1.72682629144155570723E-11, + 9.67580903537323691224E-11, + -5.18979560163526290666E-10, + 2.65982372468238665035E-9, + -1.30002500998624804212E-8, + 6.04699502254191894932E-8, + -2.67079385394061173391E-7, + 1.11738753912010371815E-6, + -4.41673835845875056359E-6, + 1.64484480707288970893E-5, + -5.75419501008210370398E-5, + 1.88502885095841655729E-4, + -5.76375574538582365885E-4, + 1.63947561694133579842E-3, + -4.32430999505057594430E-3, + 1.05464603945949983183E-2, + -2.37374148058994688156E-2, + 4.93052842396707084878E-2, + -9.49010970480476444210E-2, + 1.71620901522208775349E-1, + -3.04682672343198398683E-1, + 6.76795274409476084995E-1 + ] + +_i0B = [ + -7.23318048787475395456E-18, + -4.83050448594418207126E-18, + 4.46562142029675999901E-17, + 3.46122286769746109310E-17, + -2.82762398051658348494E-16, + -3.42548561967721913462E-16, + 1.77256013305652638360E-15, + 3.81168066935262242075E-15, + -9.55484669882830764870E-15, + -4.15056934728722208663E-14, + 1.54008621752140982691E-14, + 3.85277838274214270114E-13, + 7.18012445138366623367E-13, + -1.79417853150680611778E-12, + -1.32158118404477131188E-11, + -3.14991652796324136454E-11, + 1.18891471078464383424E-11, + 4.94060238822496958910E-10, + 3.39623202570838634515E-9, + 2.26666899049817806459E-8, + 2.04891858946906374183E-7, + 2.89137052083475648297E-6, + 6.88975834691682398426E-5, + 3.36911647825569408990E-3, + 8.04490411014108831608E-1 + ] + + +def _chbevl(x, vals): + b0 = vals[0] + b1 = 0.0 + + for i in range(1, len(vals)): + b2 = b1 + b1 = b0 + b0 = x*b1 - b2 + vals[i] + + return 0.5*(b0 - b2) + + +def _i0_1(x): + return exp(x) * _chbevl(x/2.0-2, _i0A) + + +def _i0_2(x): + return exp(x) * _chbevl(32.0/x - 2.0, _i0B) / sqrt(x) + + +def _i0_dispatcher(x): + return (x,) + + +@array_function_dispatch(_i0_dispatcher) +def i0(x): + """ + Modified Bessel function of the first kind, order 0. + + Usually denoted :math:`I_0`. + + Parameters + ---------- + x : array_like of float + Argument of the Bessel function. + + Returns + ------- + out : ndarray, shape = x.shape, dtype = float + The modified Bessel function evaluated at each of the elements of `x`. + + See Also + -------- + scipy.special.i0, scipy.special.iv, scipy.special.ive + + Notes + ----- + The scipy implementation is recommended over this function: it is a + proper ufunc written in C, and more than an order of magnitude faster. + + We use the algorithm published by Clenshaw [1]_ and referenced by + Abramowitz and Stegun [2]_, for which the function domain is + partitioned into the two intervals [0,8] and (8,inf), and Chebyshev + polynomial expansions are employed in each interval. Relative error on + the domain [0,30] using IEEE arithmetic is documented [3]_ as having a + peak of 5.8e-16 with an rms of 1.4e-16 (n = 30000). + + References + ---------- + .. [1] C. W. Clenshaw, "Chebyshev series for mathematical functions", in + *National Physical Laboratory Mathematical Tables*, vol. 5, London: + Her Majesty's Stationery Office, 1962. + .. [2] M. Abramowitz and I. A. Stegun, *Handbook of Mathematical + Functions*, 10th printing, New York: Dover, 1964, pp. 379. + https://personal.math.ubc.ca/~cbm/aands/page_379.htm + .. [3] https://metacpan.org/pod/distribution/Math-Cephes/lib/Math/Cephes.pod#i0:-Modified-Bessel-function-of-order-zero + + Examples + -------- + >>> np.i0(0.) + array(1.0) + >>> np.i0([0, 1, 2, 3]) + array([1. , 1.26606588, 2.2795853 , 4.88079259]) + + """ + x = np.asanyarray(x) + if x.dtype.kind == 'c': + raise TypeError("i0 not supported for complex values") + if x.dtype.kind != 'f': + x = x.astype(float) + x = np.abs(x) + return piecewise(x, [x <= 8.0], [_i0_1, _i0_2]) + +## End of cephes code for i0 + + +@set_module('numpy') +def kaiser(M, beta): + """ + Return the Kaiser window. + + The Kaiser window is a taper formed by using a Bessel function. + + Parameters + ---------- + M : int + Number of points in the output window. If zero or less, an + empty array is returned. + beta : float + Shape parameter for window. + + Returns + ------- + out : array + The window, with the maximum value normalized to one (the value + one appears only if the number of samples is odd). + + See Also + -------- + bartlett, blackman, hamming, hanning + + Notes + ----- + The Kaiser window is defined as + + .. math:: w(n) = I_0\\left( \\beta \\sqrt{1-\\frac{4n^2}{(M-1)^2}} + \\right)/I_0(\\beta) + + with + + .. math:: \\quad -\\frac{M-1}{2} \\leq n \\leq \\frac{M-1}{2}, + + where :math:`I_0` is the modified zeroth-order Bessel function. + + The Kaiser was named for Jim Kaiser, who discovered a simple + approximation to the DPSS window based on Bessel functions. The Kaiser + window is a very good approximation to the Digital Prolate Spheroidal + Sequence, or Slepian window, which is the transform which maximizes the + energy in the main lobe of the window relative to total energy. + + The Kaiser can approximate many other windows by varying the beta + parameter. + + ==== ======================= + beta Window shape + ==== ======================= + 0 Rectangular + 5 Similar to a Hamming + 6 Similar to a Hanning + 8.6 Similar to a Blackman + ==== ======================= + + A beta value of 14 is probably a good starting point. Note that as beta + gets large, the window narrows, and so the number of samples needs to be + large enough to sample the increasingly narrow spike, otherwise NaNs will + get returned. + + Most references to the Kaiser window come from the signal processing + literature, where it is used as one of many windowing functions for + smoothing values. It is also known as an apodization (which means + "removing the foot", i.e. smoothing discontinuities at the beginning + and end of the sampled signal) or tapering function. + + References + ---------- + .. [1] J. F. Kaiser, "Digital Filters" - Ch 7 in "Systems analysis by + digital computer", Editors: F.F. Kuo and J.F. Kaiser, p 218-285. + John Wiley and Sons, New York, (1966). + .. [2] E.R. Kanasewich, "Time Sequence Analysis in Geophysics", The + University of Alberta Press, 1975, pp. 177-178. + .. [3] Wikipedia, "Window function", + https://en.wikipedia.org/wiki/Window_function + + Examples + -------- + >>> import matplotlib.pyplot as plt + >>> np.kaiser(12, 14) + array([7.72686684e-06, 3.46009194e-03, 4.65200189e-02, # may vary + 2.29737120e-01, 5.99885316e-01, 9.45674898e-01, + 9.45674898e-01, 5.99885316e-01, 2.29737120e-01, + 4.65200189e-02, 3.46009194e-03, 7.72686684e-06]) + + + Plot the window and the frequency response. + + .. plot:: + :include-source: + + import matplotlib.pyplot as plt + from numpy.fft import fft, fftshift + window = np.kaiser(51, 14) + plt.plot(window) + plt.title("Kaiser window") + plt.ylabel("Amplitude") + plt.xlabel("Sample") + plt.show() + + plt.figure() + A = fft(window, 2048) / 25.5 + mag = np.abs(fftshift(A)) + freq = np.linspace(-0.5, 0.5, len(A)) + response = 20 * np.log10(mag) + response = np.clip(response, -100, 100) + plt.plot(freq, response) + plt.title("Frequency response of Kaiser window") + plt.ylabel("Magnitude [dB]") + plt.xlabel("Normalized frequency [cycles per sample]") + plt.axis('tight') + plt.show() + + """ + # Ensures at least float64 via 0.0. M should be an integer, but conversion + # to double is safe for a range. (Simplified result_type with 0.0 + # strongly typed. result-type is not/less order sensitive, but that mainly + # matters for integers anyway.) + values = np.array([0.0, M, beta]) + M = values[1] + beta = values[2] + + if M == 1: + return np.ones(1, dtype=values.dtype) + n = arange(0, M) + alpha = (M-1)/2.0 + return i0(beta * sqrt(1-((n-alpha)/alpha)**2.0))/i0(beta) + + +def _sinc_dispatcher(x): + return (x,) + + +@array_function_dispatch(_sinc_dispatcher) +def sinc(x): + r""" + Return the normalized sinc function. + + The sinc function is equal to :math:`\sin(\pi x)/(\pi x)` for any argument + :math:`x\ne 0`. ``sinc(0)`` takes the limit value 1, making ``sinc`` not + only everywhere continuous but also infinitely differentiable. + + .. note:: + + Note the normalization factor of ``pi`` used in the definition. + This is the most commonly used definition in signal processing. + Use ``sinc(x / np.pi)`` to obtain the unnormalized sinc function + :math:`\sin(x)/x` that is more common in mathematics. + + Parameters + ---------- + x : ndarray + Array (possibly multi-dimensional) of values for which to calculate + ``sinc(x)``. + + Returns + ------- + out : ndarray + ``sinc(x)``, which has the same shape as the input. + + Notes + ----- + The name sinc is short for "sine cardinal" or "sinus cardinalis". + + The sinc function is used in various signal processing applications, + including in anti-aliasing, in the construction of a Lanczos resampling + filter, and in interpolation. + + For bandlimited interpolation of discrete-time signals, the ideal + interpolation kernel is proportional to the sinc function. + + References + ---------- + .. [1] Weisstein, Eric W. "Sinc Function." From MathWorld--A Wolfram Web + Resource. https://mathworld.wolfram.com/SincFunction.html + .. [2] Wikipedia, "Sinc function", + https://en.wikipedia.org/wiki/Sinc_function + + Examples + -------- + >>> import matplotlib.pyplot as plt + >>> x = np.linspace(-4, 4, 41) + >>> np.sinc(x) + array([-3.89804309e-17, -4.92362781e-02, -8.40918587e-02, # may vary + -8.90384387e-02, -5.84680802e-02, 3.89804309e-17, + 6.68206631e-02, 1.16434881e-01, 1.26137788e-01, + 8.50444803e-02, -3.89804309e-17, -1.03943254e-01, + -1.89206682e-01, -2.16236208e-01, -1.55914881e-01, + 3.89804309e-17, 2.33872321e-01, 5.04551152e-01, + 7.56826729e-01, 9.35489284e-01, 1.00000000e+00, + 9.35489284e-01, 7.56826729e-01, 5.04551152e-01, + 2.33872321e-01, 3.89804309e-17, -1.55914881e-01, + -2.16236208e-01, -1.89206682e-01, -1.03943254e-01, + -3.89804309e-17, 8.50444803e-02, 1.26137788e-01, + 1.16434881e-01, 6.68206631e-02, 3.89804309e-17, + -5.84680802e-02, -8.90384387e-02, -8.40918587e-02, + -4.92362781e-02, -3.89804309e-17]) + + >>> plt.plot(x, np.sinc(x)) + [] + >>> plt.title("Sinc Function") + Text(0.5, 1.0, 'Sinc Function') + >>> plt.ylabel("Amplitude") + Text(0, 0.5, 'Amplitude') + >>> plt.xlabel("X") + Text(0.5, 0, 'X') + >>> plt.show() + + """ + x = np.asanyarray(x) + y = pi * where(x == 0, 1.0e-20, x) + return sin(y)/y + + +def _ureduce(a, func, keepdims=False, **kwargs): + """ + Internal Function. + Call `func` with `a` as first argument swapping the axes to use extended + axis on functions that don't support it natively. + + Returns result and a.shape with axis dims set to 1. + + Parameters + ---------- + a : array_like + Input array or object that can be converted to an array. + func : callable + Reduction function capable of receiving a single axis argument. + It is called with `a` as first argument followed by `kwargs`. + kwargs : keyword arguments + additional keyword arguments to pass to `func`. + + Returns + ------- + result : tuple + Result of func(a, **kwargs) and a.shape with axis dims set to 1 + which can be used to reshape the result to the same shape a ufunc with + keepdims=True would produce. + + """ + a = np.asanyarray(a) + axis = kwargs.get('axis', None) + out = kwargs.get('out', None) + + if keepdims is np._NoValue: + keepdims = False + + nd = a.ndim + if axis is not None: + axis = _nx.normalize_axis_tuple(axis, nd) + + if keepdims: + if out is not None: + index_out = tuple( + 0 if i in axis else slice(None) for i in range(nd)) + kwargs['out'] = out[(Ellipsis, ) + index_out] + + if len(axis) == 1: + kwargs['axis'] = axis[0] + else: + keep = set(range(nd)) - set(axis) + nkeep = len(keep) + # swap axis that should not be reduced to front + for i, s in enumerate(sorted(keep)): + a = a.swapaxes(i, s) + # merge reduced axis + a = a.reshape(a.shape[:nkeep] + (-1,)) + kwargs['axis'] = -1 + else: + if keepdims: + if out is not None: + index_out = (0, ) * nd + kwargs['out'] = out[(Ellipsis, ) + index_out] + + r = func(a, **kwargs) + + if out is not None: + return out + + if keepdims: + if axis is None: + index_r = (np.newaxis, ) * nd + else: + index_r = tuple( + np.newaxis if i in axis else slice(None) + for i in range(nd)) + r = r[(Ellipsis, ) + index_r] + + return r + + +def _median_dispatcher( + a, axis=None, out=None, overwrite_input=None, keepdims=None): + return (a, out) + + +@array_function_dispatch(_median_dispatcher) +def median(a, axis=None, out=None, overwrite_input=False, keepdims=False): + """ + Compute the median along the specified axis. + + Returns the median of the array elements. + + Parameters + ---------- + a : array_like + Input array or object that can be converted to an array. + axis : {int, sequence of int, None}, optional + Axis or axes along which the medians are computed. The default, + axis=None, will compute the median along a flattened version of + the array. + + .. versionadded:: 1.9.0 + + If a sequence of axes, the array is first flattened along the + given axes, then the median is computed along the resulting + flattened axis. + out : ndarray, optional + Alternative output array in which to place the result. It must + have the same shape and buffer length as the expected output, + but the type (of the output) will be cast if necessary. + overwrite_input : bool, optional + If True, then allow use of memory of input array `a` for + calculations. The input array will be modified by the call to + `median`. This will save memory when you do not need to preserve + the contents of the input array. Treat the input as undefined, + but it will probably be fully or partially sorted. Default is + False. If `overwrite_input` is ``True`` and `a` is not already an + `ndarray`, an error will be raised. + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the original `arr`. + + .. versionadded:: 1.9.0 + + Returns + ------- + median : ndarray + A new array holding the result. If the input contains integers + or floats smaller than ``float64``, then the output data-type is + ``np.float64``. Otherwise, the data-type of the output is the + same as that of the input. If `out` is specified, that array is + returned instead. + + See Also + -------- + mean, percentile + + Notes + ----- + Given a vector ``V`` of length ``N``, the median of ``V`` is the + middle value of a sorted copy of ``V``, ``V_sorted`` - i + e., ``V_sorted[(N-1)/2]``, when ``N`` is odd, and the average of the + two middle values of ``V_sorted`` when ``N`` is even. + + Examples + -------- + >>> a = np.array([[10, 7, 4], [3, 2, 1]]) + >>> a + array([[10, 7, 4], + [ 3, 2, 1]]) + >>> np.median(a) + np.float64(3.5) + >>> np.median(a, axis=0) + array([6.5, 4.5, 2.5]) + >>> np.median(a, axis=1) + array([7., 2.]) + >>> np.median(a, axis=(0, 1)) + np.float64(3.5) + >>> m = np.median(a, axis=0) + >>> out = np.zeros_like(m) + >>> np.median(a, axis=0, out=m) + array([6.5, 4.5, 2.5]) + >>> m + array([6.5, 4.5, 2.5]) + >>> b = a.copy() + >>> np.median(b, axis=1, overwrite_input=True) + array([7., 2.]) + >>> assert not np.all(a==b) + >>> b = a.copy() + >>> np.median(b, axis=None, overwrite_input=True) + np.float64(3.5) + >>> assert not np.all(a==b) + + """ + return _ureduce(a, func=_median, keepdims=keepdims, axis=axis, out=out, + overwrite_input=overwrite_input) + + +def _median(a, axis=None, out=None, overwrite_input=False): + # can't be reasonably be implemented in terms of percentile as we have to + # call mean to not break astropy + a = np.asanyarray(a) + + # Set the partition indexes + if axis is None: + sz = a.size + else: + sz = a.shape[axis] + if sz % 2 == 0: + szh = sz // 2 + kth = [szh - 1, szh] + else: + kth = [(sz - 1) // 2] + + # We have to check for NaNs (as of writing 'M' doesn't actually work). + supports_nans = np.issubdtype(a.dtype, np.inexact) or a.dtype.kind in 'Mm' + if supports_nans: + kth.append(-1) + + if overwrite_input: + if axis is None: + part = a.ravel() + part.partition(kth) + else: + a.partition(kth, axis=axis) + part = a + else: + part = partition(a, kth, axis=axis) + + if part.shape == (): + # make 0-D arrays work + return part.item() + if axis is None: + axis = 0 + + indexer = [slice(None)] * part.ndim + index = part.shape[axis] // 2 + if part.shape[axis] % 2 == 1: + # index with slice to allow mean (below) to work + indexer[axis] = slice(index, index+1) + else: + indexer[axis] = slice(index-1, index+1) + indexer = tuple(indexer) + + # Use mean in both odd and even case to coerce data type, + # using out array if needed. + rout = mean(part[indexer], axis=axis, out=out) + if supports_nans and sz > 0: + # If nans are possible, warn and replace by nans like mean would. + rout = np.lib._utils_impl._median_nancheck(part, rout, axis) + + return rout + + +def _percentile_dispatcher(a, q, axis=None, out=None, overwrite_input=None, + method=None, keepdims=None, *, weights=None, + interpolation=None): + return (a, q, out, weights) + + +@array_function_dispatch(_percentile_dispatcher) +def percentile(a, + q, + axis=None, + out=None, + overwrite_input=False, + method="linear", + keepdims=False, + *, + weights=None, + interpolation=None): + """ + Compute the q-th percentile of the data along the specified axis. + + Returns the q-th percentile(s) of the array elements. + + Parameters + ---------- + a : array_like of real numbers + Input array or object that can be converted to an array. + q : array_like of float + Percentage or sequence of percentages for the percentiles to compute. + Values must be between 0 and 100 inclusive. + axis : {int, tuple of int, None}, optional + Axis or axes along which the percentiles are computed. The + default is to compute the percentile(s) along a flattened + version of the array. + + .. versionchanged:: 1.9.0 + A tuple of axes is supported + out : ndarray, optional + Alternative output array in which to place the result. It must + have the same shape and buffer length as the expected output, + but the type (of the output) will be cast if necessary. + overwrite_input : bool, optional + If True, then allow the input array `a` to be modified by intermediate + calculations, to save memory. In this case, the contents of the input + `a` after this function completes is undefined. + method : str, optional + This parameter specifies the method to use for estimating the + percentile. There are many different methods, some unique to NumPy. + See the notes for explanation. The options sorted by their R type + as summarized in the H&F paper [1]_ are: + + 1. 'inverted_cdf' + 2. 'averaged_inverted_cdf' + 3. 'closest_observation' + 4. 'interpolated_inverted_cdf' + 5. 'hazen' + 6. 'weibull' + 7. 'linear' (default) + 8. 'median_unbiased' + 9. 'normal_unbiased' + + The first three methods are discontinuous. NumPy further defines the + following discontinuous variations of the default 'linear' (7.) option: + + * 'lower' + * 'higher', + * 'midpoint' + * 'nearest' + + .. versionchanged:: 1.22.0 + This argument was previously called "interpolation" and only + offered the "linear" default and last four options. + + keepdims : bool, optional + If this is set to True, the axes which are reduced are left in + the result as dimensions with size one. With this option, the + result will broadcast correctly against the original array `a`. + + .. versionadded:: 1.9.0 + + weights : array_like, optional + An array of weights associated with the values in `a`. Each value in + `a` contributes to the percentile according to its associated weight. + The weights array can either be 1-D (in which case its length must be + the size of `a` along the given axis) or of the same shape as `a`. + If `weights=None`, then all data in `a` are assumed to have a + weight equal to one. + Only `method="inverted_cdf"` supports weights. + See the notes for more details. + + .. versionadded:: 2.0.0 + + interpolation : str, optional + Deprecated name for the method keyword argument. + + .. deprecated:: 1.22.0 + + Returns + ------- + percentile : scalar or ndarray + If `q` is a single percentile and `axis=None`, then the result + is a scalar. If multiple percentiles are given, first axis of + the result corresponds to the percentiles. The other axes are + the axes that remain after the reduction of `a`. If the input + contains integers or floats smaller than ``float64``, the output + data-type is ``float64``. Otherwise, the output data-type is the + same as that of the input. If `out` is specified, that array is + returned instead. + + See Also + -------- + mean + median : equivalent to ``percentile(..., 50)`` + nanpercentile + quantile : equivalent to percentile, except q in the range [0, 1]. + + Notes + ----- + In general, the percentile at percentage level :math:`q` of a cumulative + distribution function :math:`F(y)=P(Y \\leq y)` with probability measure + :math:`P` is defined as any number :math:`x` that fulfills the + *coverage conditions* + + .. math:: P(Y < x) \\leq q/100 \\quad\\text{and} + \\quad P(Y \\leq x) \\geq q/100 + + with random variable :math:`Y\\sim P`. + Sample percentiles, the result of ``percentile``, provide nonparametric + estimation of the underlying population counterparts, represented by the + unknown :math:`F`, given a data vector ``a`` of length ``n``. + + One type of estimators arises when one considers :math:`F` as the empirical + distribution function of the data, i.e. + :math:`F(y) = \\frac{1}{n} \\sum_i 1_{a_i \\leq y}`. + Then, different methods correspond to different choices of :math:`x` that + fulfill the above inequalities. Methods that follow this approach are + ``inverted_cdf`` and ``averaged_inverted_cdf``. + + A more general way to define sample percentile estimators is as follows. + The empirical q-percentile of ``a`` is the ``n * q/100``-th value of the + way from the minimum to the maximum in a sorted copy of ``a``. The values + and distances of the two nearest neighbors as well as the `method` + parameter will determine the percentile if the normalized ranking does not + match the location of ``n * q/100`` exactly. This function is the same as + the median if ``q=50``, the same as the minimum if ``q=0`` and the same + as the maximum if ``q=100``. + + The optional `method` parameter specifies the method to use when the + desired percentile lies between two indexes ``i`` and ``j = i + 1``. + In that case, we first determine ``i + g``, a virtual index that lies + between ``i`` and ``j``, where ``i`` is the floor and ``g`` is the + fractional part of the index. The final result is, then, an interpolation + of ``a[i]`` and ``a[j]`` based on ``g``. During the computation of ``g``, + ``i`` and ``j`` are modified using correction constants ``alpha`` and + ``beta`` whose choices depend on the ``method`` used. Finally, note that + since Python uses 0-based indexing, the code subtracts another 1 from the + index internally. + + The following formula determines the virtual index ``i + g``, the location + of the percentile in the sorted sample: + + .. math:: + i + g = (q / 100) * ( n - alpha - beta + 1 ) + alpha + + The different methods then work as follows + + inverted_cdf: + method 1 of H&F [1]_. + This method gives discontinuous results: + + * if g > 0 ; then take j + * if g = 0 ; then take i + + averaged_inverted_cdf: + method 2 of H&F [1]_. + This method gives discontinuous results: + + * if g > 0 ; then take j + * if g = 0 ; then average between bounds + + closest_observation: + method 3 of H&F [1]_. + This method gives discontinuous results: + + * if g > 0 ; then take j + * if g = 0 and index is odd ; then take j + * if g = 0 and index is even ; then take i + + interpolated_inverted_cdf: + method 4 of H&F [1]_. + This method gives continuous results using: + + * alpha = 0 + * beta = 1 + + hazen: + method 5 of H&F [1]_. + This method gives continuous results using: + + * alpha = 1/2 + * beta = 1/2 + + weibull: + method 6 of H&F [1]_. + This method gives continuous results using: + + * alpha = 0 + * beta = 0 + + linear: + method 7 of H&F [1]_. + This method gives continuous results using: + + * alpha = 1 + * beta = 1 + + median_unbiased: + method 8 of H&F [1]_. + This method is probably the best method if the sample + distribution function is unknown (see reference). + This method gives continuous results using: + + * alpha = 1/3 + * beta = 1/3 + + normal_unbiased: + method 9 of H&F [1]_. + This method is probably the best method if the sample + distribution function is known to be normal. + This method gives continuous results using: + + * alpha = 3/8 + * beta = 3/8 + + lower: + NumPy method kept for backwards compatibility. + Takes ``i`` as the interpolation point. + + higher: + NumPy method kept for backwards compatibility. + Takes ``j`` as the interpolation point. + + nearest: + NumPy method kept for backwards compatibility. + Takes ``i`` or ``j``, whichever is nearest. + + midpoint: + NumPy method kept for backwards compatibility. + Uses ``(i + j) / 2``. + + For weighted percentiles, the above coverage conditions still hold. The + empirical cumulative distribution is simply replaced by its weighted + version, i.e. + :math:`P(Y \\leq t) = \\frac{1}{\\sum_i w_i} \\sum_i w_i 1_{x_i \\leq t}`. + Only ``method="inverted_cdf"`` supports weights. + + + Examples + -------- + >>> a = np.array([[10, 7, 4], [3, 2, 1]]) + >>> a + array([[10, 7, 4], + [ 3, 2, 1]]) + >>> np.percentile(a, 50) + 3.5 + >>> np.percentile(a, 50, axis=0) + array([6.5, 4.5, 2.5]) + >>> np.percentile(a, 50, axis=1) + array([7., 2.]) + >>> np.percentile(a, 50, axis=1, keepdims=True) + array([[7.], + [2.]]) + + >>> m = np.percentile(a, 50, axis=0) + >>> out = np.zeros_like(m) + >>> np.percentile(a, 50, axis=0, out=out) + array([6.5, 4.5, 2.5]) + >>> m + array([6.5, 4.5, 2.5]) + + >>> b = a.copy() + >>> np.percentile(b, 50, axis=1, overwrite_input=True) + array([7., 2.]) + >>> assert not np.all(a == b) + + The different methods can be visualized graphically: + + .. plot:: + + import matplotlib.pyplot as plt + + a = np.arange(4) + p = np.linspace(0, 100, 6001) + ax = plt.gca() + lines = [ + ('linear', '-', 'C0'), + ('inverted_cdf', ':', 'C1'), + # Almost the same as `inverted_cdf`: + ('averaged_inverted_cdf', '-.', 'C1'), + ('closest_observation', ':', 'C2'), + ('interpolated_inverted_cdf', '--', 'C1'), + ('hazen', '--', 'C3'), + ('weibull', '-.', 'C4'), + ('median_unbiased', '--', 'C5'), + ('normal_unbiased', '-.', 'C6'), + ] + for method, style, color in lines: + ax.plot( + p, np.percentile(a, p, method=method), + label=method, linestyle=style, color=color) + ax.set( + title='Percentiles for different methods and data: ' + str(a), + xlabel='Percentile', + ylabel='Estimated percentile value', + yticks=a) + ax.legend(bbox_to_anchor=(1.03, 1)) + plt.tight_layout() + plt.show() + + References + ---------- + .. [1] R. J. Hyndman and Y. Fan, + "Sample quantiles in statistical packages," + The American Statistician, 50(4), pp. 361-365, 1996 + + """ + if interpolation is not None: + method = _check_interpolation_as_method( + method, interpolation, "percentile") + + a = np.asanyarray(a) + if a.dtype.kind == "c": + raise TypeError("a must be an array of real numbers") + + # Use dtype of array if possible (e.g., if q is a python int or float) + # by making the divisor have the dtype of the data array. + q = np.true_divide(q, a.dtype.type(100) if a.dtype.kind == "f" else 100) + q = asanyarray(q) # undo any decay that the ufunc performed (see gh-13105) + if not _quantile_is_valid(q): + raise ValueError("Percentiles must be in the range [0, 100]") + + if weights is not None: + if method != "inverted_cdf": + msg = ("Only method 'inverted_cdf' supports weights. " + f"Got: {method}.") + raise ValueError(msg) + if axis is not None: + axis = _nx.normalize_axis_tuple(axis, a.ndim, argname="axis") + weights = _weights_are_valid(weights=weights, a=a, axis=axis) + if np.any(weights < 0): + raise ValueError("Weights must be non-negative.") + + return _quantile_unchecked( + a, q, axis, out, overwrite_input, method, keepdims, weights) + + +def _quantile_dispatcher(a, q, axis=None, out=None, overwrite_input=None, + method=None, keepdims=None, *, weights=None, + interpolation=None): + return (a, q, out, weights) + + +@array_function_dispatch(_quantile_dispatcher) +def quantile(a, + q, + axis=None, + out=None, + overwrite_input=False, + method="linear", + keepdims=False, + *, + weights=None, + interpolation=None): + """ + Compute the q-th quantile of the data along the specified axis. + + .. versionadded:: 1.15.0 + + Parameters + ---------- + a : array_like of real numbers + Input array or object that can be converted to an array. + q : array_like of float + Probability or sequence of probabilities for the quantiles to compute. + Values must be between 0 and 1 inclusive. + axis : {int, tuple of int, None}, optional + Axis or axes along which the quantiles are computed. The default is + to compute the quantile(s) along a flattened version of the array. + out : ndarray, optional + Alternative output array in which to place the result. It must have + the same shape and buffer length as the expected output, but the + type (of the output) will be cast if necessary. + overwrite_input : bool, optional + If True, then allow the input array `a` to be modified by + intermediate calculations, to save memory. In this case, the + contents of the input `a` after this function completes is + undefined. + method : str, optional + This parameter specifies the method to use for estimating the + quantile. There are many different methods, some unique to NumPy. + See the notes for explanation. The options sorted by their R type + as summarized in the H&F paper [1]_ are: + + 1. 'inverted_cdf' + 2. 'averaged_inverted_cdf' + 3. 'closest_observation' + 4. 'interpolated_inverted_cdf' + 5. 'hazen' + 6. 'weibull' + 7. 'linear' (default) + 8. 'median_unbiased' + 9. 'normal_unbiased' + + The first three methods are discontinuous. NumPy further defines the + following discontinuous variations of the default 'linear' (7.) option: + + * 'lower' + * 'higher', + * 'midpoint' + * 'nearest' + + .. versionchanged:: 1.22.0 + This argument was previously called "interpolation" and only + offered the "linear" default and last four options. + + keepdims : bool, optional + If this is set to True, the axes which are reduced are left in + the result as dimensions with size one. With this option, the + result will broadcast correctly against the original array `a`. + + weights : array_like, optional + An array of weights associated with the values in `a`. Each value in + `a` contributes to the quantile according to its associated weight. + The weights array can either be 1-D (in which case its length must be + the size of `a` along the given axis) or of the same shape as `a`. + If `weights=None`, then all data in `a` are assumed to have a + weight equal to one. + Only `method="inverted_cdf"` supports weights. + See the notes for more details. + + .. versionadded:: 2.0.0 + + interpolation : str, optional + Deprecated name for the method keyword argument. + + .. deprecated:: 1.22.0 + + Returns + ------- + quantile : scalar or ndarray + If `q` is a single probability and `axis=None`, then the result + is a scalar. If multiple probability levels are given, first axis + of the result corresponds to the quantiles. The other axes are + the axes that remain after the reduction of `a`. If the input + contains integers or floats smaller than ``float64``, the output + data-type is ``float64``. Otherwise, the output data-type is the + same as that of the input. If `out` is specified, that array is + returned instead. + + See Also + -------- + mean + percentile : equivalent to quantile, but with q in the range [0, 100]. + median : equivalent to ``quantile(..., 0.5)`` + nanquantile + + Notes + ----- + Given a sample `a` from an underlying distribution, `quantile` provides a + nonparametric estimate of the inverse cumulative distribution function. + + By default, this is done by interpolating between adjacent elements in + ``y``, a sorted copy of `a`:: + + (1-g)*y[j] + g*y[j+1] + + where the index ``j`` and coefficient ``g`` are the integral and + fractional components of ``q * (n-1)``, and ``n`` is the number of + elements in the sample. + + This is a special case of Equation 1 of H&F [1]_. More generally, + + - ``j = (q*n + m - 1) // 1``, and + - ``g = (q*n + m - 1) % 1``, + + where ``m`` may be defined according to several different conventions. + The preferred convention may be selected using the ``method`` parameter: + + =============================== =============== =============== + ``method`` number in H&F ``m`` + =============================== =============== =============== + ``interpolated_inverted_cdf`` 4 ``0`` + ``hazen`` 5 ``1/2`` + ``weibull`` 6 ``q`` + ``linear`` (default) 7 ``1 - q`` + ``median_unbiased`` 8 ``q/3 + 1/3`` + ``normal_unbiased`` 9 ``q/4 + 3/8`` + =============================== =============== =============== + + Note that indices ``j`` and ``j + 1`` are clipped to the range ``0`` to + ``n - 1`` when the results of the formula would be outside the allowed + range of non-negative indices. The ``- 1`` in the formulas for ``j`` and + ``g`` accounts for Python's 0-based indexing. + + The table above includes only the estimators from H&F that are continuous + functions of probability `q` (estimators 4-9). NumPy also provides the + three discontinuous estimators from H&F (estimators 1-3), where ``j`` is + defined as above, ``m`` is defined as follows, and ``g`` is a function + of the real-valued ``index = q*n + m - 1`` and ``j``. + + 1. ``inverted_cdf``: ``m = 0`` and ``g = int(index - j > 0)`` + 2. ``averaged_inverted_cdf``: ``m = 0`` and + ``g = (1 + int(index - j > 0)) / 2`` + 3. ``closest_observation``: ``m = -1/2`` and + ``g = 1 - int((index == j) & (j%2 == 1))`` + + For backward compatibility with previous versions of NumPy, `quantile` + provides four additional discontinuous estimators. Like + ``method='linear'``, all have ``m = 1 - q`` so that ``j = q*(n-1) // 1``, + but ``g`` is defined as follows. + + - ``lower``: ``g = 0`` + - ``midpoint``: ``g = 0.5`` + - ``higher``: ``g = 1`` + - ``nearest``: ``g = (q*(n-1) % 1) > 0.5`` + + **Weighted quantiles:** + More formally, the quantile at probability level :math:`q` of a cumulative + distribution function :math:`F(y)=P(Y \\leq y)` with probability measure + :math:`P` is defined as any number :math:`x` that fulfills the + *coverage conditions* + + .. math:: P(Y < x) \\leq q \\quad\\text{and}\\quad P(Y \\leq x) \\geq q + + with random variable :math:`Y\\sim P`. + Sample quantiles, the result of ``quantile``, provide nonparametric + estimation of the underlying population counterparts, represented by the + unknown :math:`F`, given a data vector ``a`` of length ``n``. + + One type of estimators arises when one considers :math:`F` as the empirical + distribution function of the data, i.e. + :math:`F(y) = \\frac{1}{n} \\sum_i 1_{a_i \\leq y}`. + Then, different methods correspond to different choices of :math:`x` that + fulfill the above inequalities. Methods that follow this approach are + ``inverted_cdf`` and ``averaged_inverted_cdf``. + + A more general way to define sample quantile estimators is as follows. + The empirical q-quantile of ``a`` is the ``n * q``-th value of the + way from the minimum to the maximum in a sorted copy of ``a``. The values + and distances of the two nearest neighbors as well as the `method` + parameter will determine the quantile if the normalized ranking does not + match the location of ``n * q`` exactly. This function is the same as + the median if ``q=0.5``, the same as the minimum if ``q=0.0`` and the same + as the maximum if ``q=1.0``. + + The optional `method` parameter specifies the method to use when the + desired quantile lies between two indexes ``i`` and ``j = i + 1``. + In that case, we first determine ``i + g``, a virtual index that lies + between ``i`` and ``j``, where ``i`` is the floor and ``g`` is the + fractional part of the index. The final result is, then, an interpolation + of ``a[i]`` and ``a[j]`` based on ``g``. During the computation of ``g``, + ``i`` and ``j`` are modified using correction constants ``alpha`` and + ``beta`` whose choices depend on the ``method`` used. Finally, note that + since Python uses 0-based indexing, the code subtracts another 1 from the + index internally. + + The following formula determines the virtual index ``i + g``, the location + of the quantile in the sorted sample: + + .. math:: + i + g = q * ( n - alpha - beta + 1 ) + alpha + + The different methods then work as follows + + inverted_cdf: + method 1 of H&F [1]_. + This method gives discontinuous results: + + * if g > 0 ; then take j + * if g = 0 ; then take i + + averaged_inverted_cdf: + method 2 of H&F [1]_. + This method gives discontinuous results: + + * if g > 0 ; then take j + * if g = 0 ; then average between bounds + + closest_observation: + method 3 of H&F [1]_. + This method gives discontinuous results: + + * if g > 0 ; then take j + * if g = 0 and index is odd ; then take j + * if g = 0 and index is even ; then take i + + interpolated_inverted_cdf: + method 4 of H&F [1]_. + This method gives continuous results using: + + * alpha = 0 + * beta = 1 + + hazen: + method 5 of H&F [1]_. + This method gives continuous results using: + + * alpha = 1/2 + * beta = 1/2 + + weibull: + method 6 of H&F [1]_. + This method gives continuous results using: + + * alpha = 0 + * beta = 0 + + linear: + method 7 of H&F [1]_. + This method gives continuous results using: + + * alpha = 1 + * beta = 1 + + median_unbiased: + method 8 of H&F [1]_. + This method is probably the best method if the sample + distribution function is unknown (see reference). + This method gives continuous results using: + + * alpha = 1/3 + * beta = 1/3 + + normal_unbiased: + method 9 of H&F [1]_. + This method is probably the best method if the sample + distribution function is known to be normal. + This method gives continuous results using: + + * alpha = 3/8 + * beta = 3/8 + + lower: + NumPy method kept for backwards compatibility. + Takes ``i`` as the interpolation point. + + higher: + NumPy method kept for backwards compatibility. + Takes ``j`` as the interpolation point. + + nearest: + NumPy method kept for backwards compatibility. + Takes ``i`` or ``j``, whichever is nearest. + + midpoint: + NumPy method kept for backwards compatibility. + Uses ``(i + j) / 2``. + + **Weighted quantiles:** + For weighted quantiles, the above coverage conditions still hold. The + empirical cumulative distribution is simply replaced by its weighted + version, i.e. + :math:`P(Y \\leq t) = \\frac{1}{\\sum_i w_i} \\sum_i w_i 1_{x_i \\leq t}`. + Only ``method="inverted_cdf"`` supports weights. + + Examples + -------- + >>> a = np.array([[10, 7, 4], [3, 2, 1]]) + >>> a + array([[10, 7, 4], + [ 3, 2, 1]]) + >>> np.quantile(a, 0.5) + 3.5 + >>> np.quantile(a, 0.5, axis=0) + array([6.5, 4.5, 2.5]) + >>> np.quantile(a, 0.5, axis=1) + array([7., 2.]) + >>> np.quantile(a, 0.5, axis=1, keepdims=True) + array([[7.], + [2.]]) + >>> m = np.quantile(a, 0.5, axis=0) + >>> out = np.zeros_like(m) + >>> np.quantile(a, 0.5, axis=0, out=out) + array([6.5, 4.5, 2.5]) + >>> m + array([6.5, 4.5, 2.5]) + >>> b = a.copy() + >>> np.quantile(b, 0.5, axis=1, overwrite_input=True) + array([7., 2.]) + >>> assert not np.all(a == b) + + See also `numpy.percentile` for a visualization of most methods. + + References + ---------- + .. [1] R. J. Hyndman and Y. Fan, + "Sample quantiles in statistical packages," + The American Statistician, 50(4), pp. 361-365, 1996 + + """ + if interpolation is not None: + method = _check_interpolation_as_method( + method, interpolation, "quantile") + + a = np.asanyarray(a) + if a.dtype.kind == "c": + raise TypeError("a must be an array of real numbers") + + # Use dtype of array if possible (e.g., if q is a python int or float). + if isinstance(q, (int, float)) and a.dtype.kind == "f": + q = np.asanyarray(q, dtype=a.dtype) + else: + q = np.asanyarray(q) + + if not _quantile_is_valid(q): + raise ValueError("Quantiles must be in the range [0, 1]") + + if weights is not None: + if method != "inverted_cdf": + msg = ("Only method 'inverted_cdf' supports weights. " + f"Got: {method}.") + raise ValueError(msg) + if axis is not None: + axis = _nx.normalize_axis_tuple(axis, a.ndim, argname="axis") + weights = _weights_are_valid(weights=weights, a=a, axis=axis) + if np.any(weights < 0): + raise ValueError("Weights must be non-negative.") + + return _quantile_unchecked( + a, q, axis, out, overwrite_input, method, keepdims, weights) + + +def _quantile_unchecked(a, + q, + axis=None, + out=None, + overwrite_input=False, + method="linear", + keepdims=False, + weights=None): + """Assumes that q is in [0, 1], and is an ndarray""" + return _ureduce(a, + func=_quantile_ureduce_func, + q=q, + weights=weights, + keepdims=keepdims, + axis=axis, + out=out, + overwrite_input=overwrite_input, + method=method) + + +def _quantile_is_valid(q): + # avoid expensive reductions, relevant for arrays with < O(1000) elements + if q.ndim == 1 and q.size < 10: + for i in range(q.size): + if not (0.0 <= q[i] <= 1.0): + return False + else: + if not (q.min() >= 0 and q.max() <= 1): + return False + return True + + +def _check_interpolation_as_method(method, interpolation, fname): + # Deprecated NumPy 1.22, 2021-11-08 + warnings.warn( + f"the `interpolation=` argument to {fname} was renamed to " + "`method=`, which has additional options.\n" + "Users of the modes 'nearest', 'lower', 'higher', or " + "'midpoint' are encouraged to review the method they used. " + "(Deprecated NumPy 1.22)", + DeprecationWarning, stacklevel=4) + if method != "linear": + # sanity check, we assume this basically never happens + raise TypeError( + "You shall not pass both `method` and `interpolation`!\n" + "(`interpolation` is Deprecated in favor of `method`)") + return interpolation + + +def _compute_virtual_index(n, quantiles, alpha: float, beta: float): + """ + Compute the floating point indexes of an array for the linear + interpolation of quantiles. + n : array_like + The sample sizes. + quantiles : array_like + The quantiles values. + alpha : float + A constant used to correct the index computed. + beta : float + A constant used to correct the index computed. + + alpha and beta values depend on the chosen method + (see quantile documentation) + + Reference: + Hyndman&Fan paper "Sample Quantiles in Statistical Packages", + DOI: 10.1080/00031305.1996.10473566 + """ + return n * quantiles + ( + alpha + quantiles * (1 - alpha - beta) + ) - 1 + + +def _get_gamma(virtual_indexes, previous_indexes, method): + """ + Compute gamma (a.k.a 'm' or 'weight') for the linear interpolation + of quantiles. + + virtual_indexes : array_like + The indexes where the percentile is supposed to be found in the sorted + sample. + previous_indexes : array_like + The floor values of virtual_indexes. + interpolation : dict + The interpolation method chosen, which may have a specific rule + modifying gamma. + + gamma is usually the fractional part of virtual_indexes but can be modified + by the interpolation method. + """ + gamma = np.asanyarray(virtual_indexes - previous_indexes) + gamma = method["fix_gamma"](gamma, virtual_indexes) + # Ensure both that we have an array, and that we keep the dtype + # (which may have been matched to the input array). + return np.asanyarray(gamma, dtype=virtual_indexes.dtype) + + +def _lerp(a, b, t, out=None): + """ + Compute the linear interpolation weighted by gamma on each point of + two same shape array. + + a : array_like + Left bound. + b : array_like + Right bound. + t : array_like + The interpolation weight. + out : array_like + Output array. + """ + diff_b_a = subtract(b, a) + # asanyarray is a stop-gap until gh-13105 + lerp_interpolation = asanyarray(add(a, diff_b_a * t, out=out)) + subtract(b, diff_b_a * (1 - t), out=lerp_interpolation, where=t >= 0.5, + casting='unsafe', dtype=type(lerp_interpolation.dtype)) + if lerp_interpolation.ndim == 0 and out is None: + lerp_interpolation = lerp_interpolation[()] # unpack 0d arrays + return lerp_interpolation + + +def _get_gamma_mask(shape, default_value, conditioned_value, where): + out = np.full(shape, default_value) + np.copyto(out, conditioned_value, where=where, casting="unsafe") + return out + + +def _discret_interpolation_to_boundaries(index, gamma_condition_fun): + previous = np.floor(index) + next = previous + 1 + gamma = index - previous + res = _get_gamma_mask(shape=index.shape, + default_value=next, + conditioned_value=previous, + where=gamma_condition_fun(gamma, index) + ).astype(np.intp) + # Some methods can lead to out-of-bound integers, clip them: + res[res < 0] = 0 + return res + + +def _closest_observation(n, quantiles): + # "choose the nearest even order statistic at g=0" (H&F (1996) pp. 362). + # Order is 1-based so for zero-based indexing round to nearest odd index. + gamma_fun = lambda gamma, index: (gamma == 0) & (np.floor(index) % 2 == 1) + return _discret_interpolation_to_boundaries((n * quantiles) - 1 - 0.5, + gamma_fun) + + +def _inverted_cdf(n, quantiles): + gamma_fun = lambda gamma, _: (gamma == 0) + return _discret_interpolation_to_boundaries((n * quantiles) - 1, + gamma_fun) + + +def _quantile_ureduce_func( + a: np.array, + q: np.array, + weights: np.array, + axis: int = None, + out=None, + overwrite_input: bool = False, + method="linear", +) -> np.array: + if q.ndim > 2: + # The code below works fine for nd, but it might not have useful + # semantics. For now, keep the supported dimensions the same as it was + # before. + raise ValueError("q must be a scalar or 1d") + if overwrite_input: + if axis is None: + axis = 0 + arr = a.ravel() + wgt = None if weights is None else weights.ravel() + else: + arr = a + wgt = weights + else: + if axis is None: + axis = 0 + arr = a.flatten() + wgt = None if weights is None else weights.flatten() + else: + arr = a.copy() + wgt = weights + result = _quantile(arr, + quantiles=q, + axis=axis, + method=method, + out=out, + weights=wgt) + return result + + +def _get_indexes(arr, virtual_indexes, valid_values_count): + """ + Get the valid indexes of arr neighbouring virtual_indexes. + Note + This is a companion function to linear interpolation of + Quantiles + + Returns + ------- + (previous_indexes, next_indexes): Tuple + A Tuple of virtual_indexes neighbouring indexes + """ + previous_indexes = np.asanyarray(np.floor(virtual_indexes)) + next_indexes = np.asanyarray(previous_indexes + 1) + indexes_above_bounds = virtual_indexes >= valid_values_count - 1 + # When indexes is above max index, take the max value of the array + if indexes_above_bounds.any(): + previous_indexes[indexes_above_bounds] = -1 + next_indexes[indexes_above_bounds] = -1 + # When indexes is below min index, take the min value of the array + indexes_below_bounds = virtual_indexes < 0 + if indexes_below_bounds.any(): + previous_indexes[indexes_below_bounds] = 0 + next_indexes[indexes_below_bounds] = 0 + if np.issubdtype(arr.dtype, np.inexact): + # After the sort, slices having NaNs will have for last element a NaN + virtual_indexes_nans = np.isnan(virtual_indexes) + if virtual_indexes_nans.any(): + previous_indexes[virtual_indexes_nans] = -1 + next_indexes[virtual_indexes_nans] = -1 + previous_indexes = previous_indexes.astype(np.intp) + next_indexes = next_indexes.astype(np.intp) + return previous_indexes, next_indexes + + +def _quantile( + arr: np.array, + quantiles: np.array, + axis: int = -1, + method="linear", + out=None, + weights=None, +): + """ + Private function that doesn't support extended axis or keepdims. + These methods are extended to this function using _ureduce + See nanpercentile for parameter usage + It computes the quantiles of the array for the given axis. + A linear interpolation is performed based on the `interpolation`. + + By default, the method is "linear" where alpha == beta == 1 which + performs the 7th method of Hyndman&Fan. + With "median_unbiased" we get alpha == beta == 1/3 + thus the 8th method of Hyndman&Fan. + """ + # --- Setup + arr = np.asanyarray(arr) + values_count = arr.shape[axis] + # The dimensions of `q` are prepended to the output shape, so we need the + # axis being sampled from `arr` to be last. + if axis != 0: # But moveaxis is slow, so only call it if necessary. + arr = np.moveaxis(arr, axis, destination=0) + supports_nans = ( + np.issubdtype(arr.dtype, np.inexact) or arr.dtype.kind in 'Mm' + ) + + if weights is None: + # --- Computation of indexes + # Index where to find the value in the sorted array. + # Virtual because it is a floating point value, not an valid index. + # The nearest neighbours are used for interpolation + try: + method_props = _QuantileMethods[method] + except KeyError: + raise ValueError( + f"{method!r} is not a valid method. Use one of: " + f"{_QuantileMethods.keys()}") from None + virtual_indexes = method_props["get_virtual_index"](values_count, + quantiles) + virtual_indexes = np.asanyarray(virtual_indexes) + + if method_props["fix_gamma"] is None: + supports_integers = True + else: + int_virtual_indices = np.issubdtype(virtual_indexes.dtype, + np.integer) + supports_integers = method == 'linear' and int_virtual_indices + + if supports_integers: + # No interpolation needed, take the points along axis + if supports_nans: + # may contain nan, which would sort to the end + arr.partition( + concatenate((virtual_indexes.ravel(), [-1])), axis=0, + ) + slices_having_nans = np.isnan(arr[-1, ...]) + else: + # cannot contain nan + arr.partition(virtual_indexes.ravel(), axis=0) + slices_having_nans = np.array(False, dtype=bool) + result = take(arr, virtual_indexes, axis=0, out=out) + else: + previous_indexes, next_indexes = _get_indexes(arr, + virtual_indexes, + values_count) + # --- Sorting + arr.partition( + np.unique(np.concatenate(([0, -1], + previous_indexes.ravel(), + next_indexes.ravel(), + ))), + axis=0) + if supports_nans: + slices_having_nans = np.isnan(arr[-1, ...]) + else: + slices_having_nans = None + # --- Get values from indexes + previous = arr[previous_indexes] + next = arr[next_indexes] + # --- Linear interpolation + gamma = _get_gamma(virtual_indexes, previous_indexes, method_props) + result_shape = virtual_indexes.shape + (1,) * (arr.ndim - 1) + gamma = gamma.reshape(result_shape) + result = _lerp(previous, + next, + gamma, + out=out) + else: + # Weighted case + # This implements method="inverted_cdf", the only supported weighted + # method, which needs to sort anyway. + weights = np.asanyarray(weights) + if axis != 0: + weights = np.moveaxis(weights, axis, destination=0) + index_array = np.argsort(arr, axis=0, kind="stable") + + # arr = arr[index_array, ...] # but this adds trailing dimensions of + # 1. + arr = np.take_along_axis(arr, index_array, axis=0) + if weights.shape == arr.shape: + weights = np.take_along_axis(weights, index_array, axis=0) + else: + # weights is 1d + weights = weights.reshape(-1)[index_array, ...] + + if supports_nans: + # may contain nan, which would sort to the end + slices_having_nans = np.isnan(arr[-1, ...]) + else: + # cannot contain nan + slices_having_nans = np.array(False, dtype=bool) + + # We use the weights to calculate the empirical cumulative + # distribution function cdf + cdf = weights.cumsum(axis=0, dtype=np.float64) + cdf /= cdf[-1, ...] # normalization to 1 + # Search index i such that + # sum(weights[j], j=0..i-1) < quantile <= sum(weights[j], j=0..i) + # is then equivalent to + # cdf[i-1] < quantile <= cdf[i] + # Unfortunately, searchsorted only accepts 1-d arrays as first + # argument, so we will need to iterate over dimensions. + + # Without the following cast, searchsorted can return surprising + # results, e.g. + # np.searchsorted(np.array([0.2, 0.4, 0.6, 0.8, 1.]), + # np.array(0.4, dtype=np.float32), side="left") + # returns 2 instead of 1 because 0.4 is not binary representable. + if quantiles.dtype.kind == "f": + cdf = cdf.astype(quantiles.dtype) + + def find_cdf_1d(arr, cdf): + indices = np.searchsorted(cdf, quantiles, side="left") + # We might have reached the maximum with i = len(arr), e.g. for + # quantiles = 1, and need to cut it to len(arr) - 1. + indices = minimum(indices, values_count - 1) + result = take(arr, indices, axis=0) + return result + + r_shape = arr.shape[1:] + if quantiles.ndim > 0: + r_shape = quantiles.shape + r_shape + if out is None: + result = np.empty_like(arr, shape=r_shape) + else: + if out.shape != r_shape: + msg = (f"Wrong shape of argument 'out', shape={r_shape} is " + f"required; got shape={out.shape}.") + raise ValueError(msg) + result = out + + # See apply_along_axis, which we do for axis=0. Note that Ni = (,) + # always, so we remove it here. + Nk = arr.shape[1:] + for kk in np.ndindex(Nk): + result[(...,) + kk] = find_cdf_1d( + arr[np.s_[:, ] + kk], cdf[np.s_[:, ] + kk] + ) + + # Make result the same as in unweighted inverted_cdf. + if result.shape == () and result.dtype == np.dtype("O"): + result = result.item() + + if np.any(slices_having_nans): + if result.ndim == 0 and out is None: + # can't write to a scalar, but indexing will be correct + result = arr[-1] + else: + np.copyto(result, arr[-1, ...], where=slices_having_nans) + return result + + +def _trapezoid_dispatcher(y, x=None, dx=None, axis=None): + return (y, x) + + +@array_function_dispatch(_trapezoid_dispatcher) +def trapezoid(y, x=None, dx=1.0, axis=-1): + r""" + Integrate along the given axis using the composite trapezoidal rule. + + If `x` is provided, the integration happens in sequence along its + elements - they are not sorted. + + Integrate `y` (`x`) along each 1d slice on the given axis, compute + :math:`\int y(x) dx`. + When `x` is specified, this integrates along the parametric curve, + computing :math:`\int_t y(t) dt = + \int_t y(t) \left.\frac{dx}{dt}\right|_{x=x(t)} dt`. + + .. versionadded:: 2.0.0 + + Parameters + ---------- + y : array_like + Input array to integrate. + x : array_like, optional + The sample points corresponding to the `y` values. If `x` is None, + the sample points are assumed to be evenly spaced `dx` apart. The + default is None. + dx : scalar, optional + The spacing between sample points when `x` is None. The default is 1. + axis : int, optional + The axis along which to integrate. + + Returns + ------- + trapezoid : float or ndarray + Definite integral of `y` = n-dimensional array as approximated along + a single axis by the trapezoidal rule. If `y` is a 1-dimensional array, + then the result is a float. If `n` is greater than 1, then the result + is an `n`-1 dimensional array. + + See Also + -------- + sum, cumsum + + Notes + ----- + Image [2]_ illustrates trapezoidal rule -- y-axis locations of points + will be taken from `y` array, by default x-axis distances between + points will be 1.0, alternatively they can be provided with `x` array + or with `dx` scalar. Return value will be equal to combined area under + the red lines. + + + References + ---------- + .. [1] Wikipedia page: https://en.wikipedia.org/wiki/Trapezoidal_rule + + .. [2] Illustration image: + https://en.wikipedia.org/wiki/File:Composite_trapezoidal_rule_illustration.png + + Examples + -------- + Use the trapezoidal rule on evenly spaced points: + + >>> np.trapezoid([1, 2, 3]) + 4.0 + + The spacing between sample points can be selected by either the + ``x`` or ``dx`` arguments: + + >>> np.trapezoid([1, 2, 3], x=[4, 6, 8]) + 8.0 + >>> np.trapezoid([1, 2, 3], dx=2) + 8.0 + + Using a decreasing ``x`` corresponds to integrating in reverse: + + >>> np.trapezoid([1, 2, 3], x=[8, 6, 4]) + -8.0 + + More generally ``x`` is used to integrate along a parametric curve. We can + estimate the integral :math:`\int_0^1 x^2 = 1/3` using: + + >>> x = np.linspace(0, 1, num=50) + >>> y = x**2 + >>> np.trapezoid(y, x) + 0.33340274885464394 + + Or estimate the area of a circle, noting we repeat the sample which closes + the curve: + + >>> theta = np.linspace(0, 2 * np.pi, num=1000, endpoint=True) + >>> np.trapezoid(np.cos(theta), x=np.sin(theta)) + 3.141571941375841 + + ``np.trapezoid`` can be applied along a specified axis to do multiple + computations in one call: + + >>> a = np.arange(6).reshape(2, 3) + >>> a + array([[0, 1, 2], + [3, 4, 5]]) + >>> np.trapezoid(a, axis=0) + array([1.5, 2.5, 3.5]) + >>> np.trapezoid(a, axis=1) + array([2., 8.]) + """ + + y = asanyarray(y) + if x is None: + d = dx + else: + x = asanyarray(x) + if x.ndim == 1: + d = diff(x) + # reshape to correct shape + shape = [1]*y.ndim + shape[axis] = d.shape[0] + d = d.reshape(shape) + else: + d = diff(x, axis=axis) + nd = y.ndim + slice1 = [slice(None)]*nd + slice2 = [slice(None)]*nd + slice1[axis] = slice(1, None) + slice2[axis] = slice(None, -1) + try: + ret = (d * (y[tuple(slice1)] + y[tuple(slice2)]) / 2.0).sum(axis) + except ValueError: + # Operations didn't work, cast to ndarray + d = np.asarray(d) + y = np.asarray(y) + ret = add.reduce(d * (y[tuple(slice1)]+y[tuple(slice2)])/2.0, axis) + return ret + + +@set_module('numpy') +def trapz(y, x=None, dx=1.0, axis=-1): + """ + `trapz` is deprecated in NumPy 2.0. + + Please use `trapezoid` instead, or one of the numerical integration + functions in `scipy.integrate`. + """ + # Deprecated in NumPy 2.0, 2023-08-18 + warnings.warn( + "`trapz` is deprecated. Use `trapezoid` instead, or one of the " + "numerical integration functions in `scipy.integrate`.", + DeprecationWarning, + stacklevel=2 + ) + return trapezoid(y, x=x, dx=dx, axis=axis) + + +def _meshgrid_dispatcher(*xi, copy=None, sparse=None, indexing=None): + return xi + + +# Based on scitools meshgrid +@array_function_dispatch(_meshgrid_dispatcher) +def meshgrid(*xi, copy=True, sparse=False, indexing='xy'): + """ + Return a tuple of coordinate matrices from coordinate vectors. + + Make N-D coordinate arrays for vectorized evaluations of + N-D scalar/vector fields over N-D grids, given + one-dimensional coordinate arrays x1, x2,..., xn. + + .. versionchanged:: 1.9 + 1-D and 0-D cases are allowed. + + Parameters + ---------- + x1, x2,..., xn : array_like + 1-D arrays representing the coordinates of a grid. + indexing : {'xy', 'ij'}, optional + Cartesian ('xy', default) or matrix ('ij') indexing of output. + See Notes for more details. + + .. versionadded:: 1.7.0 + sparse : bool, optional + If True the shape of the returned coordinate array for dimension *i* + is reduced from ``(N1, ..., Ni, ... Nn)`` to + ``(1, ..., 1, Ni, 1, ..., 1)``. These sparse coordinate grids are + intended to be use with :ref:`basics.broadcasting`. When all + coordinates are used in an expression, broadcasting still leads to a + fully-dimensonal result array. + + Default is False. + + .. versionadded:: 1.7.0 + copy : bool, optional + If False, a view into the original arrays are returned in order to + conserve memory. Default is True. Please note that + ``sparse=False, copy=False`` will likely return non-contiguous + arrays. Furthermore, more than one element of a broadcast array + may refer to a single memory location. If you need to write to the + arrays, make copies first. + + .. versionadded:: 1.7.0 + + Returns + ------- + X1, X2,..., XN : tuple of ndarrays + For vectors `x1`, `x2`,..., `xn` with lengths ``Ni=len(xi)``, + returns ``(N1, N2, N3,..., Nn)`` shaped arrays if indexing='ij' + or ``(N2, N1, N3,..., Nn)`` shaped arrays if indexing='xy' + with the elements of `xi` repeated to fill the matrix along + the first dimension for `x1`, the second for `x2` and so on. + + Notes + ----- + This function supports both indexing conventions through the indexing + keyword argument. Giving the string 'ij' returns a meshgrid with + matrix indexing, while 'xy' returns a meshgrid with Cartesian indexing. + In the 2-D case with inputs of length M and N, the outputs are of shape + (N, M) for 'xy' indexing and (M, N) for 'ij' indexing. In the 3-D case + with inputs of length M, N and P, outputs are of shape (N, M, P) for + 'xy' indexing and (M, N, P) for 'ij' indexing. The difference is + illustrated by the following code snippet:: + + xv, yv = np.meshgrid(x, y, indexing='ij') + for i in range(nx): + for j in range(ny): + # treat xv[i,j], yv[i,j] + + xv, yv = np.meshgrid(x, y, indexing='xy') + for i in range(nx): + for j in range(ny): + # treat xv[j,i], yv[j,i] + + In the 1-D and 0-D case, the indexing and sparse keywords have no effect. + + See Also + -------- + mgrid : Construct a multi-dimensional "meshgrid" using indexing notation. + ogrid : Construct an open multi-dimensional "meshgrid" using indexing + notation. + :ref:`how-to-index` + + Examples + -------- + >>> nx, ny = (3, 2) + >>> x = np.linspace(0, 1, nx) + >>> y = np.linspace(0, 1, ny) + >>> xv, yv = np.meshgrid(x, y) + >>> xv + array([[0. , 0.5, 1. ], + [0. , 0.5, 1. ]]) + >>> yv + array([[0., 0., 0.], + [1., 1., 1.]]) + + The result of `meshgrid` is a coordinate grid: + + >>> import matplotlib.pyplot as plt + >>> plt.plot(xv, yv, marker='o', color='k', linestyle='none') + >>> plt.show() + + You can create sparse output arrays to save memory and computation time. + + >>> xv, yv = np.meshgrid(x, y, sparse=True) + >>> xv + array([[0. , 0.5, 1. ]]) + >>> yv + array([[0.], + [1.]]) + + `meshgrid` is very useful to evaluate functions on a grid. If the + function depends on all coordinates, both dense and sparse outputs can be + used. + + >>> x = np.linspace(-5, 5, 101) + >>> y = np.linspace(-5, 5, 101) + >>> # full coordinate arrays + >>> xx, yy = np.meshgrid(x, y) + >>> zz = np.sqrt(xx**2 + yy**2) + >>> xx.shape, yy.shape, zz.shape + ((101, 101), (101, 101), (101, 101)) + >>> # sparse coordinate arrays + >>> xs, ys = np.meshgrid(x, y, sparse=True) + >>> zs = np.sqrt(xs**2 + ys**2) + >>> xs.shape, ys.shape, zs.shape + ((1, 101), (101, 1), (101, 101)) + >>> np.array_equal(zz, zs) + True + + >>> h = plt.contourf(x, y, zs) + >>> plt.axis('scaled') + >>> plt.colorbar() + >>> plt.show() + """ + ndim = len(xi) + + if indexing not in ['xy', 'ij']: + raise ValueError( + "Valid values for `indexing` are 'xy' and 'ij'.") + + s0 = (1,) * ndim + output = [np.asanyarray(x).reshape(s0[:i] + (-1,) + s0[i + 1:]) + for i, x in enumerate(xi)] + + if indexing == 'xy' and ndim > 1: + # switch first and second axis + output[0].shape = (1, -1) + s0[2:] + output[1].shape = (-1, 1) + s0[2:] + + if not sparse: + # Return the full N-D matrix (not only the 1-D vector) + output = np.broadcast_arrays(*output, subok=True) + + if copy: + output = tuple(x.copy() for x in output) + + return output + + +def _delete_dispatcher(arr, obj, axis=None): + return (arr, obj) + + +@array_function_dispatch(_delete_dispatcher) +def delete(arr, obj, axis=None): + """ + Return a new array with sub-arrays along an axis deleted. For a one + dimensional array, this returns those entries not returned by + `arr[obj]`. + + Parameters + ---------- + arr : array_like + Input array. + obj : slice, int or array of ints + Indicate indices of sub-arrays to remove along the specified axis. + + .. versionchanged:: 1.19.0 + Boolean indices are now treated as a mask of elements to remove, + rather than being cast to the integers 0 and 1. + + axis : int, optional + The axis along which to delete the subarray defined by `obj`. + If `axis` is None, `obj` is applied to the flattened array. + + Returns + ------- + out : ndarray + A copy of `arr` with the elements specified by `obj` removed. Note + that `delete` does not occur in-place. If `axis` is None, `out` is + a flattened array. + + See Also + -------- + insert : Insert elements into an array. + append : Append elements at the end of an array. + + Notes + ----- + Often it is preferable to use a boolean mask. For example: + + >>> arr = np.arange(12) + 1 + >>> mask = np.ones(len(arr), dtype=bool) + >>> mask[[0,2,4]] = False + >>> result = arr[mask,...] + + Is equivalent to ``np.delete(arr, [0,2,4], axis=0)``, but allows further + use of `mask`. + + Examples + -------- + >>> arr = np.array([[1,2,3,4], [5,6,7,8], [9,10,11,12]]) + >>> arr + array([[ 1, 2, 3, 4], + [ 5, 6, 7, 8], + [ 9, 10, 11, 12]]) + >>> np.delete(arr, 1, 0) + array([[ 1, 2, 3, 4], + [ 9, 10, 11, 12]]) + + >>> np.delete(arr, np.s_[::2], 1) + array([[ 2, 4], + [ 6, 8], + [10, 12]]) + >>> np.delete(arr, [1,3,5], None) + array([ 1, 3, 5, 7, 8, 9, 10, 11, 12]) + + """ + conv = _array_converter(arr) + arr, = conv.as_arrays(subok=False) + + ndim = arr.ndim + arrorder = 'F' if arr.flags.fnc else 'C' + if axis is None: + if ndim != 1: + arr = arr.ravel() + # needed for np.matrix, which is still not 1d after being ravelled + ndim = arr.ndim + axis = ndim - 1 + else: + axis = normalize_axis_index(axis, ndim) + + slobj = [slice(None)]*ndim + N = arr.shape[axis] + newshape = list(arr.shape) + + if isinstance(obj, slice): + start, stop, step = obj.indices(N) + xr = range(start, stop, step) + numtodel = len(xr) + + if numtodel <= 0: + return conv.wrap(arr.copy(order=arrorder), to_scalar=False) + + # Invert if step is negative: + if step < 0: + step = -step + start = xr[-1] + stop = xr[0] + 1 + + newshape[axis] -= numtodel + new = empty(newshape, arr.dtype, arrorder) + # copy initial chunk + if start == 0: + pass + else: + slobj[axis] = slice(None, start) + new[tuple(slobj)] = arr[tuple(slobj)] + # copy end chunk + if stop == N: + pass + else: + slobj[axis] = slice(stop-numtodel, None) + slobj2 = [slice(None)]*ndim + slobj2[axis] = slice(stop, None) + new[tuple(slobj)] = arr[tuple(slobj2)] + # copy middle pieces + if step == 1: + pass + else: # use array indexing. + keep = ones(stop-start, dtype=bool) + keep[:stop-start:step] = False + slobj[axis] = slice(start, stop-numtodel) + slobj2 = [slice(None)]*ndim + slobj2[axis] = slice(start, stop) + arr = arr[tuple(slobj2)] + slobj2[axis] = keep + new[tuple(slobj)] = arr[tuple(slobj2)] + + return conv.wrap(new, to_scalar=False) + + if isinstance(obj, (int, integer)) and not isinstance(obj, bool): + single_value = True + else: + single_value = False + _obj = obj + obj = np.asarray(obj) + # `size == 0` to allow empty lists similar to indexing, but (as there) + # is really too generic: + if obj.size == 0 and not isinstance(_obj, np.ndarray): + obj = obj.astype(intp) + elif obj.size == 1 and obj.dtype.kind in "ui": + # For a size 1 integer array we can use the single-value path + # (most dtypes, except boolean, should just fail later). + obj = obj.item() + single_value = True + + if single_value: + # optimization for a single value + if (obj < -N or obj >= N): + raise IndexError( + "index %i is out of bounds for axis %i with " + "size %i" % (obj, axis, N)) + if (obj < 0): + obj += N + newshape[axis] -= 1 + new = empty(newshape, arr.dtype, arrorder) + slobj[axis] = slice(None, obj) + new[tuple(slobj)] = arr[tuple(slobj)] + slobj[axis] = slice(obj, None) + slobj2 = [slice(None)]*ndim + slobj2[axis] = slice(obj+1, None) + new[tuple(slobj)] = arr[tuple(slobj2)] + else: + if obj.dtype == bool: + if obj.shape != (N,): + raise ValueError('boolean array argument obj to delete ' + 'must be one dimensional and match the axis ' + 'length of {}'.format(N)) + + # optimization, the other branch is slower + keep = ~obj + else: + keep = ones(N, dtype=bool) + keep[obj,] = False + + slobj[axis] = keep + new = arr[tuple(slobj)] + + return conv.wrap(new, to_scalar=False) + + +def _insert_dispatcher(arr, obj, values, axis=None): + return (arr, obj, values) + + +@array_function_dispatch(_insert_dispatcher) +def insert(arr, obj, values, axis=None): + """ + Insert values along the given axis before the given indices. + + Parameters + ---------- + arr : array_like + Input array. + obj : int, slice or sequence of ints + Object that defines the index or indices before which `values` is + inserted. + + .. versionadded:: 1.8.0 + + Support for multiple insertions when `obj` is a single scalar or a + sequence with one element (similar to calling insert multiple + times). + values : array_like + Values to insert into `arr`. If the type of `values` is different + from that of `arr`, `values` is converted to the type of `arr`. + `values` should be shaped so that ``arr[...,obj,...] = values`` + is legal. + axis : int, optional + Axis along which to insert `values`. If `axis` is None then `arr` + is flattened first. + + Returns + ------- + out : ndarray + A copy of `arr` with `values` inserted. Note that `insert` + does not occur in-place: a new array is returned. If + `axis` is None, `out` is a flattened array. + + See Also + -------- + append : Append elements at the end of an array. + concatenate : Join a sequence of arrays along an existing axis. + delete : Delete elements from an array. + + Notes + ----- + Note that for higher dimensional inserts ``obj=0`` behaves very different + from ``obj=[0]`` just like ``arr[:,0,:] = values`` is different from + ``arr[:,[0],:] = values``. + + Examples + -------- + >>> a = np.array([[1, 1], [2, 2], [3, 3]]) + >>> a + array([[1, 1], + [2, 2], + [3, 3]]) + >>> np.insert(a, 1, 5) + array([1, 5, 1, ..., 2, 3, 3]) + >>> np.insert(a, 1, 5, axis=1) + array([[1, 5, 1], + [2, 5, 2], + [3, 5, 3]]) + + Difference between sequence and scalars: + + >>> np.insert(a, [1], [[1],[2],[3]], axis=1) + array([[1, 1, 1], + [2, 2, 2], + [3, 3, 3]]) + >>> np.array_equal(np.insert(a, 1, [1, 2, 3], axis=1), + ... np.insert(a, [1], [[1],[2],[3]], axis=1)) + True + + >>> b = a.flatten() + >>> b + array([1, 1, 2, 2, 3, 3]) + >>> np.insert(b, [2, 2], [5, 6]) + array([1, 1, 5, ..., 2, 3, 3]) + + >>> np.insert(b, slice(2, 4), [5, 6]) + array([1, 1, 5, ..., 2, 3, 3]) + + >>> np.insert(b, [2, 2], [7.13, False]) # type casting + array([1, 1, 7, ..., 2, 3, 3]) + + >>> x = np.arange(8).reshape(2, 4) + >>> idx = (1, 3) + >>> np.insert(x, idx, 999, axis=1) + array([[ 0, 999, 1, 2, 999, 3], + [ 4, 999, 5, 6, 999, 7]]) + + """ + conv = _array_converter(arr) + arr, = conv.as_arrays(subok=False) + + ndim = arr.ndim + arrorder = 'F' if arr.flags.fnc else 'C' + if axis is None: + if ndim != 1: + arr = arr.ravel() + # needed for np.matrix, which is still not 1d after being ravelled + ndim = arr.ndim + axis = ndim - 1 + else: + axis = normalize_axis_index(axis, ndim) + slobj = [slice(None)]*ndim + N = arr.shape[axis] + newshape = list(arr.shape) + + if isinstance(obj, slice): + # turn it into a range object + indices = arange(*obj.indices(N), dtype=intp) + else: + # need to copy obj, because indices will be changed in-place + indices = np.array(obj) + if indices.dtype == bool: + # See also delete + # 2012-10-11, NumPy 1.8 + warnings.warn( + "in the future insert will treat boolean arrays and " + "array-likes as a boolean index instead of casting it to " + "integer", FutureWarning, stacklevel=2) + indices = indices.astype(intp) + # Code after warning period: + #if obj.ndim != 1: + # raise ValueError('boolean array argument obj to insert ' + # 'must be one dimensional') + #indices = np.flatnonzero(obj) + elif indices.ndim > 1: + raise ValueError( + "index array argument obj to insert must be one dimensional " + "or scalar") + if indices.size == 1: + index = indices.item() + if index < -N or index > N: + raise IndexError(f"index {obj} is out of bounds for axis {axis} " + f"with size {N}") + if (index < 0): + index += N + + # There are some object array corner cases here, but we cannot avoid + # that: + values = array(values, copy=None, ndmin=arr.ndim, dtype=arr.dtype) + if indices.ndim == 0: + # broadcasting is very different here, since a[:,0,:] = ... behaves + # very different from a[:,[0],:] = ...! This changes values so that + # it works likes the second case. (here a[:,0:1,:]) + values = np.moveaxis(values, 0, axis) + numnew = values.shape[axis] + newshape[axis] += numnew + new = empty(newshape, arr.dtype, arrorder) + slobj[axis] = slice(None, index) + new[tuple(slobj)] = arr[tuple(slobj)] + slobj[axis] = slice(index, index+numnew) + new[tuple(slobj)] = values + slobj[axis] = slice(index+numnew, None) + slobj2 = [slice(None)] * ndim + slobj2[axis] = slice(index, None) + new[tuple(slobj)] = arr[tuple(slobj2)] + + return conv.wrap(new, to_scalar=False) + + elif indices.size == 0 and not isinstance(obj, np.ndarray): + # Can safely cast the empty list to intp + indices = indices.astype(intp) + + indices[indices < 0] += N + + numnew = len(indices) + order = indices.argsort(kind='mergesort') # stable sort + indices[order] += np.arange(numnew) + + newshape[axis] += numnew + old_mask = ones(newshape[axis], dtype=bool) + old_mask[indices] = False + + new = empty(newshape, arr.dtype, arrorder) + slobj2 = [slice(None)]*ndim + slobj[axis] = indices + slobj2[axis] = old_mask + new[tuple(slobj)] = values + new[tuple(slobj2)] = arr + + return conv.wrap(new, to_scalar=False) + + +def _append_dispatcher(arr, values, axis=None): + return (arr, values) + + +@array_function_dispatch(_append_dispatcher) +def append(arr, values, axis=None): + """ + Append values to the end of an array. + + Parameters + ---------- + arr : array_like + Values are appended to a copy of this array. + values : array_like + These values are appended to a copy of `arr`. It must be of the + correct shape (the same shape as `arr`, excluding `axis`). If + `axis` is not specified, `values` can be any shape and will be + flattened before use. + axis : int, optional + The axis along which `values` are appended. If `axis` is not + given, both `arr` and `values` are flattened before use. + + Returns + ------- + append : ndarray + A copy of `arr` with `values` appended to `axis`. Note that + `append` does not occur in-place: a new array is allocated and + filled. If `axis` is None, `out` is a flattened array. + + See Also + -------- + insert : Insert elements into an array. + delete : Delete elements from an array. + + Examples + -------- + >>> np.append([1, 2, 3], [[4, 5, 6], [7, 8, 9]]) + array([1, 2, 3, ..., 7, 8, 9]) + + When `axis` is specified, `values` must have the correct shape. + + >>> np.append([[1, 2, 3], [4, 5, 6]], [[7, 8, 9]], axis=0) + array([[1, 2, 3], + [4, 5, 6], + [7, 8, 9]]) + >>> np.append([[1, 2, 3], [4, 5, 6]], [7, 8, 9], axis=0) + Traceback (most recent call last): + ... + ValueError: all the input arrays must have same number of dimensions, but + the array at index 0 has 2 dimension(s) and the array at index 1 has 1 + dimension(s) + + """ + arr = asanyarray(arr) + if axis is None: + if arr.ndim != 1: + arr = arr.ravel() + values = ravel(values) + axis = arr.ndim-1 + return concatenate((arr, values), axis=axis) + + +def _digitize_dispatcher(x, bins, right=None): + return (x, bins) + + +@array_function_dispatch(_digitize_dispatcher) +def digitize(x, bins, right=False): + """ + Return the indices of the bins to which each value in input array belongs. + + ========= ============= ============================ + `right` order of bins returned index `i` satisfies + ========= ============= ============================ + ``False`` increasing ``bins[i-1] <= x < bins[i]`` + ``True`` increasing ``bins[i-1] < x <= bins[i]`` + ``False`` decreasing ``bins[i-1] > x >= bins[i]`` + ``True`` decreasing ``bins[i-1] >= x > bins[i]`` + ========= ============= ============================ + + If values in `x` are beyond the bounds of `bins`, 0 or ``len(bins)`` is + returned as appropriate. + + Parameters + ---------- + x : array_like + Input array to be binned. Prior to NumPy 1.10.0, this array had to + be 1-dimensional, but can now have any shape. + bins : array_like + Array of bins. It has to be 1-dimensional and monotonic. + right : bool, optional + Indicating whether the intervals include the right or the left bin + edge. Default behavior is (right==False) indicating that the interval + does not include the right edge. The left bin end is open in this + case, i.e., bins[i-1] <= x < bins[i] is the default behavior for + monotonically increasing bins. + + Returns + ------- + indices : ndarray of ints + Output array of indices, of same shape as `x`. + + Raises + ------ + ValueError + If `bins` is not monotonic. + TypeError + If the type of the input is complex. + + See Also + -------- + bincount, histogram, unique, searchsorted + + Notes + ----- + If values in `x` are such that they fall outside the bin range, + attempting to index `bins` with the indices that `digitize` returns + will result in an IndexError. + + .. versionadded:: 1.10.0 + + `numpy.digitize` is implemented in terms of `numpy.searchsorted`. + This means that a binary search is used to bin the values, which scales + much better for larger number of bins than the previous linear search. + It also removes the requirement for the input array to be 1-dimensional. + + For monotonically *increasing* `bins`, the following are equivalent:: + + np.digitize(x, bins, right=True) + np.searchsorted(bins, x, side='left') + + Note that as the order of the arguments are reversed, the side must be too. + The `searchsorted` call is marginally faster, as it does not do any + monotonicity checks. Perhaps more importantly, it supports all dtypes. + + Examples + -------- + >>> x = np.array([0.2, 6.4, 3.0, 1.6]) + >>> bins = np.array([0.0, 1.0, 2.5, 4.0, 10.0]) + >>> inds = np.digitize(x, bins) + >>> inds + array([1, 4, 3, 2]) + >>> for n in range(x.size): + ... print(bins[inds[n]-1], "<=", x[n], "<", bins[inds[n]]) + ... + 0.0 <= 0.2 < 1.0 + 4.0 <= 6.4 < 10.0 + 2.5 <= 3.0 < 4.0 + 1.0 <= 1.6 < 2.5 + + >>> x = np.array([1.2, 10.0, 12.4, 15.5, 20.]) + >>> bins = np.array([0, 5, 10, 15, 20]) + >>> np.digitize(x,bins,right=True) + array([1, 2, 3, 4, 4]) + >>> np.digitize(x,bins,right=False) + array([1, 3, 3, 4, 5]) + """ + x = _nx.asarray(x) + bins = _nx.asarray(bins) + + # here for compatibility, searchsorted below is happy to take this + if np.issubdtype(x.dtype, _nx.complexfloating): + raise TypeError("x may not be complex") + + mono = _monotonicity(bins) + if mono == 0: + raise ValueError("bins must be monotonically increasing or decreasing") + + # this is backwards because the arguments below are swapped + side = 'left' if right else 'right' + if mono == -1: + # reverse the bins, and invert the results + return len(bins) - _nx.searchsorted(bins[::-1], x, side=side) + else: + return _nx.searchsorted(bins, x, side=side) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_function_base_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_function_base_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..2650568d3923ef8a735d9492eeeb5fcdcdaa997e --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_function_base_impl.pyi @@ -0,0 +1,700 @@ +import sys +from collections.abc import Sequence, Iterator, Callable, Iterable +from typing import ( + Literal as L, + Any, + TypeVar, + overload, + Protocol, + SupportsIndex, + SupportsInt, +) + +if sys.version_info >= (3, 10): + from typing import TypeGuard +else: + from typing_extensions import TypeGuard + +from numpy import ( + vectorize as vectorize, + ufunc, + generic, + floating, + complexfloating, + intp, + float64, + complex128, + timedelta64, + datetime64, + object_, + _OrderKACF, +) + +from numpy._typing import ( + NDArray, + ArrayLike, + DTypeLike, + _ShapeLike, + _ScalarLike_co, + _DTypeLike, + _ArrayLike, + _ArrayLikeInt_co, + _ArrayLikeFloat_co, + _ArrayLikeComplex_co, + _ArrayLikeTD64_co, + _ArrayLikeDT64_co, + _ArrayLikeObject_co, + _FloatLike_co, + _ComplexLike_co, +) + +from numpy._core.multiarray import ( + bincount as bincount, +) + +_T = TypeVar("_T") +_T_co = TypeVar("_T_co", covariant=True) +_SCT = TypeVar("_SCT", bound=generic) +_ArrayType = TypeVar("_ArrayType", bound=NDArray[Any]) + +_2Tuple = tuple[_T, _T] + +class _TrimZerosSequence(Protocol[_T_co]): + def __len__(self) -> int: ... + def __getitem__(self, key: slice, /) -> _T_co: ... + def __iter__(self) -> Iterator[Any]: ... + +class _SupportsWriteFlush(Protocol): + def write(self, s: str, /) -> object: ... + def flush(self) -> object: ... + +__all__: list[str] + +@overload +def rot90( + m: _ArrayLike[_SCT], + k: int = ..., + axes: tuple[int, int] = ..., +) -> NDArray[_SCT]: ... +@overload +def rot90( + m: ArrayLike, + k: int = ..., + axes: tuple[int, int] = ..., +) -> NDArray[Any]: ... + +@overload +def flip(m: _SCT, axis: None = ...) -> _SCT: ... +@overload +def flip(m: _ScalarLike_co, axis: None = ...) -> Any: ... +@overload +def flip(m: _ArrayLike[_SCT], axis: None | _ShapeLike = ...) -> NDArray[_SCT]: ... +@overload +def flip(m: ArrayLike, axis: None | _ShapeLike = ...) -> NDArray[Any]: ... + +def iterable(y: object) -> TypeGuard[Iterable[Any]]: ... + +@overload +def average( + a: _ArrayLikeFloat_co, + axis: None = ..., + weights: None | _ArrayLikeFloat_co= ..., + returned: L[False] = ..., + keepdims: L[False] = ..., +) -> floating[Any]: ... +@overload +def average( + a: _ArrayLikeComplex_co, + axis: None = ..., + weights: None | _ArrayLikeComplex_co = ..., + returned: L[False] = ..., + keepdims: L[False] = ..., +) -> complexfloating[Any, Any]: ... +@overload +def average( + a: _ArrayLikeObject_co, + axis: None = ..., + weights: None | Any = ..., + returned: L[False] = ..., + keepdims: L[False] = ..., +) -> Any: ... +@overload +def average( + a: _ArrayLikeFloat_co, + axis: None = ..., + weights: None | _ArrayLikeFloat_co= ..., + returned: L[True] = ..., + keepdims: L[False] = ..., +) -> _2Tuple[floating[Any]]: ... +@overload +def average( + a: _ArrayLikeComplex_co, + axis: None = ..., + weights: None | _ArrayLikeComplex_co = ..., + returned: L[True] = ..., + keepdims: L[False] = ..., +) -> _2Tuple[complexfloating[Any, Any]]: ... +@overload +def average( + a: _ArrayLikeObject_co, + axis: None = ..., + weights: None | Any = ..., + returned: L[True] = ..., + keepdims: L[False] = ..., +) -> _2Tuple[Any]: ... +@overload +def average( + a: _ArrayLikeComplex_co | _ArrayLikeObject_co, + axis: None | _ShapeLike = ..., + weights: None | Any = ..., + returned: L[False] = ..., + keepdims: bool = ..., +) -> Any: ... +@overload +def average( + a: _ArrayLikeComplex_co | _ArrayLikeObject_co, + axis: None | _ShapeLike = ..., + weights: None | Any = ..., + returned: L[True] = ..., + keepdims: bool = ..., +) -> _2Tuple[Any]: ... + +@overload +def asarray_chkfinite( + a: _ArrayLike[_SCT], + dtype: None = ..., + order: _OrderKACF = ..., +) -> NDArray[_SCT]: ... +@overload +def asarray_chkfinite( + a: object, + dtype: None = ..., + order: _OrderKACF = ..., +) -> NDArray[Any]: ... +@overload +def asarray_chkfinite( + a: Any, + dtype: _DTypeLike[_SCT], + order: _OrderKACF = ..., +) -> NDArray[_SCT]: ... +@overload +def asarray_chkfinite( + a: Any, + dtype: DTypeLike, + order: _OrderKACF = ..., +) -> NDArray[Any]: ... + +# TODO: Use PEP 612 `ParamSpec` once mypy supports `Concatenate` +# xref python/mypy#8645 +@overload +def piecewise( + x: _ArrayLike[_SCT], + condlist: ArrayLike, + funclist: Sequence[Any | Callable[..., Any]], + *args: Any, + **kw: Any, +) -> NDArray[_SCT]: ... +@overload +def piecewise( + x: ArrayLike, + condlist: ArrayLike, + funclist: Sequence[Any | Callable[..., Any]], + *args: Any, + **kw: Any, +) -> NDArray[Any]: ... + +def select( + condlist: Sequence[ArrayLike], + choicelist: Sequence[ArrayLike], + default: ArrayLike = ..., +) -> NDArray[Any]: ... + +@overload +def copy( + a: _ArrayType, + order: _OrderKACF, + subok: L[True], +) -> _ArrayType: ... +@overload +def copy( + a: _ArrayType, + order: _OrderKACF = ..., + *, + subok: L[True], +) -> _ArrayType: ... +@overload +def copy( + a: _ArrayLike[_SCT], + order: _OrderKACF = ..., + subok: L[False] = ..., +) -> NDArray[_SCT]: ... +@overload +def copy( + a: ArrayLike, + order: _OrderKACF = ..., + subok: L[False] = ..., +) -> NDArray[Any]: ... + +def gradient( + f: ArrayLike, + *varargs: ArrayLike, + axis: None | _ShapeLike = ..., + edge_order: L[1, 2] = ..., +) -> Any: ... + +@overload +def diff( + a: _T, + n: L[0], + axis: SupportsIndex = ..., + prepend: ArrayLike = ..., + append: ArrayLike = ..., +) -> _T: ... +@overload +def diff( + a: ArrayLike, + n: int = ..., + axis: SupportsIndex = ..., + prepend: ArrayLike = ..., + append: ArrayLike = ..., +) -> NDArray[Any]: ... + +@overload +def interp( + x: _ArrayLikeFloat_co, + xp: _ArrayLikeFloat_co, + fp: _ArrayLikeFloat_co, + left: None | _FloatLike_co = ..., + right: None | _FloatLike_co = ..., + period: None | _FloatLike_co = ..., +) -> NDArray[float64]: ... +@overload +def interp( + x: _ArrayLikeFloat_co, + xp: _ArrayLikeFloat_co, + fp: _ArrayLikeComplex_co, + left: None | _ComplexLike_co = ..., + right: None | _ComplexLike_co = ..., + period: None | _FloatLike_co = ..., +) -> NDArray[complex128]: ... + +@overload +def angle(z: _ComplexLike_co, deg: bool = ...) -> floating[Any]: ... +@overload +def angle(z: object_, deg: bool = ...) -> Any: ... +@overload +def angle(z: _ArrayLikeComplex_co, deg: bool = ...) -> NDArray[floating[Any]]: ... +@overload +def angle(z: _ArrayLikeObject_co, deg: bool = ...) -> NDArray[object_]: ... + +@overload +def unwrap( + p: _ArrayLikeFloat_co, + discont: None | float = ..., + axis: int = ..., + *, + period: float = ..., +) -> NDArray[floating[Any]]: ... +@overload +def unwrap( + p: _ArrayLikeObject_co, + discont: None | float = ..., + axis: int = ..., + *, + period: float = ..., +) -> NDArray[object_]: ... + +def sort_complex(a: ArrayLike) -> NDArray[complexfloating[Any, Any]]: ... + +def trim_zeros( + filt: _TrimZerosSequence[_T], + trim: L["f", "b", "fb", "bf"] = ..., +) -> _T: ... + +@overload +def extract(condition: ArrayLike, arr: _ArrayLike[_SCT]) -> NDArray[_SCT]: ... +@overload +def extract(condition: ArrayLike, arr: ArrayLike) -> NDArray[Any]: ... + +def place(arr: NDArray[Any], mask: ArrayLike, vals: Any) -> None: ... + +def disp( + mesg: object, + device: None | _SupportsWriteFlush = ..., + linefeed: bool = ..., +) -> None: ... + +@overload +def cov( + m: _ArrayLikeFloat_co, + y: None | _ArrayLikeFloat_co = ..., + rowvar: bool = ..., + bias: bool = ..., + ddof: None | SupportsIndex | SupportsInt = ..., + fweights: None | ArrayLike = ..., + aweights: None | ArrayLike = ..., + *, + dtype: None = ..., +) -> NDArray[floating[Any]]: ... +@overload +def cov( + m: _ArrayLikeComplex_co, + y: None | _ArrayLikeComplex_co = ..., + rowvar: bool = ..., + bias: bool = ..., + ddof: None | SupportsIndex | SupportsInt = ..., + fweights: None | ArrayLike = ..., + aweights: None | ArrayLike = ..., + *, + dtype: None = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def cov( + m: _ArrayLikeComplex_co, + y: None | _ArrayLikeComplex_co = ..., + rowvar: bool = ..., + bias: bool = ..., + ddof: None | SupportsIndex | SupportsInt = ..., + fweights: None | ArrayLike = ..., + aweights: None | ArrayLike = ..., + *, + dtype: _DTypeLike[_SCT], +) -> NDArray[_SCT]: ... +@overload +def cov( + m: _ArrayLikeComplex_co, + y: None | _ArrayLikeComplex_co = ..., + rowvar: bool = ..., + bias: bool = ..., + ddof: None | SupportsIndex | SupportsInt = ..., + fweights: None | ArrayLike = ..., + aweights: None | ArrayLike = ..., + *, + dtype: DTypeLike, +) -> NDArray[Any]: ... + +# NOTE `bias` and `ddof` have been deprecated +@overload +def corrcoef( + m: _ArrayLikeFloat_co, + y: None | _ArrayLikeFloat_co = ..., + rowvar: bool = ..., + *, + dtype: None = ..., +) -> NDArray[floating[Any]]: ... +@overload +def corrcoef( + m: _ArrayLikeComplex_co, + y: None | _ArrayLikeComplex_co = ..., + rowvar: bool = ..., + *, + dtype: None = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def corrcoef( + m: _ArrayLikeComplex_co, + y: None | _ArrayLikeComplex_co = ..., + rowvar: bool = ..., + *, + dtype: _DTypeLike[_SCT], +) -> NDArray[_SCT]: ... +@overload +def corrcoef( + m: _ArrayLikeComplex_co, + y: None | _ArrayLikeComplex_co = ..., + rowvar: bool = ..., + *, + dtype: DTypeLike, +) -> NDArray[Any]: ... + +def blackman(M: _FloatLike_co) -> NDArray[floating[Any]]: ... + +def bartlett(M: _FloatLike_co) -> NDArray[floating[Any]]: ... + +def hanning(M: _FloatLike_co) -> NDArray[floating[Any]]: ... + +def hamming(M: _FloatLike_co) -> NDArray[floating[Any]]: ... + +def i0(x: _ArrayLikeFloat_co) -> NDArray[floating[Any]]: ... + +def kaiser( + M: _FloatLike_co, + beta: _FloatLike_co, +) -> NDArray[floating[Any]]: ... + +@overload +def sinc(x: _FloatLike_co) -> floating[Any]: ... +@overload +def sinc(x: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def sinc(x: _ArrayLikeFloat_co) -> NDArray[floating[Any]]: ... +@overload +def sinc(x: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def median( + a: _ArrayLikeFloat_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + keepdims: L[False] = ..., +) -> floating[Any]: ... +@overload +def median( + a: _ArrayLikeComplex_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + keepdims: L[False] = ..., +) -> complexfloating[Any, Any]: ... +@overload +def median( + a: _ArrayLikeTD64_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + keepdims: L[False] = ..., +) -> timedelta64: ... +@overload +def median( + a: _ArrayLikeObject_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + keepdims: L[False] = ..., +) -> Any: ... +@overload +def median( + a: _ArrayLikeFloat_co | _ArrayLikeComplex_co | _ArrayLikeTD64_co | _ArrayLikeObject_co, + axis: None | _ShapeLike = ..., + out: None = ..., + overwrite_input: bool = ..., + keepdims: bool = ..., +) -> Any: ... +@overload +def median( + a: _ArrayLikeFloat_co | _ArrayLikeComplex_co | _ArrayLikeTD64_co | _ArrayLikeObject_co, + axis: None | _ShapeLike = ..., + out: _ArrayType = ..., + overwrite_input: bool = ..., + keepdims: bool = ..., +) -> _ArrayType: ... + +_MethodKind = L[ + "inverted_cdf", + "averaged_inverted_cdf", + "closest_observation", + "interpolated_inverted_cdf", + "hazen", + "weibull", + "linear", + "median_unbiased", + "normal_unbiased", + "lower", + "higher", + "midpoint", + "nearest", +] + +@overload +def percentile( + a: _ArrayLikeFloat_co, + q: _FloatLike_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> floating[Any]: ... +@overload +def percentile( + a: _ArrayLikeComplex_co, + q: _FloatLike_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> complexfloating[Any, Any]: ... +@overload +def percentile( + a: _ArrayLikeTD64_co, + q: _FloatLike_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> timedelta64: ... +@overload +def percentile( + a: _ArrayLikeDT64_co, + q: _FloatLike_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> datetime64: ... +@overload +def percentile( + a: _ArrayLikeObject_co, + q: _FloatLike_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> Any: ... +@overload +def percentile( + a: _ArrayLikeFloat_co, + q: _ArrayLikeFloat_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> NDArray[floating[Any]]: ... +@overload +def percentile( + a: _ArrayLikeComplex_co, + q: _ArrayLikeFloat_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def percentile( + a: _ArrayLikeTD64_co, + q: _ArrayLikeFloat_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> NDArray[timedelta64]: ... +@overload +def percentile( + a: _ArrayLikeDT64_co, + q: _ArrayLikeFloat_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> NDArray[datetime64]: ... +@overload +def percentile( + a: _ArrayLikeObject_co, + q: _ArrayLikeFloat_co, + axis: None = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: L[False] = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> NDArray[object_]: ... +@overload +def percentile( + a: _ArrayLikeComplex_co | _ArrayLikeTD64_co | _ArrayLikeTD64_co | _ArrayLikeObject_co, + q: _ArrayLikeFloat_co, + axis: None | _ShapeLike = ..., + out: None = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: bool = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> Any: ... +@overload +def percentile( + a: _ArrayLikeComplex_co | _ArrayLikeTD64_co | _ArrayLikeTD64_co | _ArrayLikeObject_co, + q: _ArrayLikeFloat_co, + axis: None | _ShapeLike = ..., + out: _ArrayType = ..., + overwrite_input: bool = ..., + method: _MethodKind = ..., + keepdims: bool = ..., + *, + weights: None | _ArrayLikeFloat_co = ..., +) -> _ArrayType: ... + +# NOTE: Not an alias, but they do have identical signatures +# (that we can reuse) +quantile = percentile + +def meshgrid( + *xi: ArrayLike, + copy: bool = ..., + sparse: bool = ..., + indexing: L["xy", "ij"] = ..., +) -> tuple[NDArray[Any], ...]: ... + +@overload +def delete( + arr: _ArrayLike[_SCT], + obj: slice | _ArrayLikeInt_co, + axis: None | SupportsIndex = ..., +) -> NDArray[_SCT]: ... +@overload +def delete( + arr: ArrayLike, + obj: slice | _ArrayLikeInt_co, + axis: None | SupportsIndex = ..., +) -> NDArray[Any]: ... + +@overload +def insert( + arr: _ArrayLike[_SCT], + obj: slice | _ArrayLikeInt_co, + values: ArrayLike, + axis: None | SupportsIndex = ..., +) -> NDArray[_SCT]: ... +@overload +def insert( + arr: ArrayLike, + obj: slice | _ArrayLikeInt_co, + values: ArrayLike, + axis: None | SupportsIndex = ..., +) -> NDArray[Any]: ... + +def append( + arr: ArrayLike, + values: ArrayLike, + axis: None | SupportsIndex = ..., +) -> NDArray[Any]: ... + +@overload +def digitize( + x: _FloatLike_co, + bins: _ArrayLikeFloat_co, + right: bool = ..., +) -> intp: ... +@overload +def digitize( + x: _ArrayLikeFloat_co, + bins: _ArrayLikeFloat_co, + right: bool = ..., +) -> NDArray[intp]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_histograms_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_histograms_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..a091d41a84c86e8a5737d85e35142a5e6cdaf98b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_histograms_impl.py @@ -0,0 +1,1082 @@ +""" +Histogram-related functions +""" +import contextlib +import functools +import operator +import warnings + +import numpy as np +from numpy._core import overrides + +__all__ = ['histogram', 'histogramdd', 'histogram_bin_edges'] + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + +# range is a keyword argument to many functions, so save the builtin so they can +# use it. +_range = range + + +def _ptp(x): + """Peak-to-peak value of x. + + This implementation avoids the problem of signed integer arrays having a + peak-to-peak value that cannot be represented with the array's data type. + This function returns an unsigned value for signed integer arrays. + """ + return _unsigned_subtract(x.max(), x.min()) + + +def _hist_bin_sqrt(x, range): + """ + Square root histogram bin estimator. + + Bin width is inversely proportional to the data size. Used by many + programs for its simplicity. + + Parameters + ---------- + x : array_like + Input data that is to be histogrammed, trimmed to range. May not + be empty. + + Returns + ------- + h : An estimate of the optimal bin width for the given data. + """ + del range # unused + return _ptp(x) / np.sqrt(x.size) + + +def _hist_bin_sturges(x, range): + """ + Sturges histogram bin estimator. + + A very simplistic estimator based on the assumption of normality of + the data. This estimator has poor performance for non-normal data, + which becomes especially obvious for large data sets. The estimate + depends only on size of the data. + + Parameters + ---------- + x : array_like + Input data that is to be histogrammed, trimmed to range. May not + be empty. + + Returns + ------- + h : An estimate of the optimal bin width for the given data. + """ + del range # unused + return _ptp(x) / (np.log2(x.size) + 1.0) + + +def _hist_bin_rice(x, range): + """ + Rice histogram bin estimator. + + Another simple estimator with no normality assumption. It has better + performance for large data than Sturges, but tends to overestimate + the number of bins. The number of bins is proportional to the cube + root of data size (asymptotically optimal). The estimate depends + only on size of the data. + + Parameters + ---------- + x : array_like + Input data that is to be histogrammed, trimmed to range. May not + be empty. + + Returns + ------- + h : An estimate of the optimal bin width for the given data. + """ + del range # unused + return _ptp(x) / (2.0 * x.size ** (1.0 / 3)) + + +def _hist_bin_scott(x, range): + """ + Scott histogram bin estimator. + + The binwidth is proportional to the standard deviation of the data + and inversely proportional to the cube root of data size + (asymptotically optimal). + + Parameters + ---------- + x : array_like + Input data that is to be histogrammed, trimmed to range. May not + be empty. + + Returns + ------- + h : An estimate of the optimal bin width for the given data. + """ + del range # unused + return (24.0 * np.pi**0.5 / x.size)**(1.0 / 3.0) * np.std(x) + + +def _hist_bin_stone(x, range): + """ + Histogram bin estimator based on minimizing the estimated integrated squared error (ISE). + + The number of bins is chosen by minimizing the estimated ISE against the unknown true distribution. + The ISE is estimated using cross-validation and can be regarded as a generalization of Scott's rule. + https://en.wikipedia.org/wiki/Histogram#Scott.27s_normal_reference_rule + + This paper by Stone appears to be the origination of this rule. + https://digitalassets.lib.berkeley.edu/sdtr/ucb/text/34.pdf + + Parameters + ---------- + x : array_like + Input data that is to be histogrammed, trimmed to range. May not + be empty. + range : (float, float) + The lower and upper range of the bins. + + Returns + ------- + h : An estimate of the optimal bin width for the given data. + """ + + n = x.size + ptp_x = _ptp(x) + if n <= 1 or ptp_x == 0: + return 0 + + def jhat(nbins): + hh = ptp_x / nbins + p_k = np.histogram(x, bins=nbins, range=range)[0] / n + return (2 - (n + 1) * p_k.dot(p_k)) / hh + + nbins_upper_bound = max(100, int(np.sqrt(n))) + nbins = min(_range(1, nbins_upper_bound + 1), key=jhat) + if nbins == nbins_upper_bound: + warnings.warn("The number of bins estimated may be suboptimal.", + RuntimeWarning, stacklevel=3) + return ptp_x / nbins + + +def _hist_bin_doane(x, range): + """ + Doane's histogram bin estimator. + + Improved version of Sturges' formula which works better for + non-normal data. See + stats.stackexchange.com/questions/55134/doanes-formula-for-histogram-binning + + Parameters + ---------- + x : array_like + Input data that is to be histogrammed, trimmed to range. May not + be empty. + + Returns + ------- + h : An estimate of the optimal bin width for the given data. + """ + del range # unused + if x.size > 2: + sg1 = np.sqrt(6.0 * (x.size - 2) / ((x.size + 1.0) * (x.size + 3))) + sigma = np.std(x) + if sigma > 0.0: + # These three operations add up to + # g1 = np.mean(((x - np.mean(x)) / sigma)**3) + # but use only one temp array instead of three + temp = x - np.mean(x) + np.true_divide(temp, sigma, temp) + np.power(temp, 3, temp) + g1 = np.mean(temp) + return _ptp(x) / (1.0 + np.log2(x.size) + + np.log2(1.0 + np.absolute(g1) / sg1)) + return 0.0 + + +def _hist_bin_fd(x, range): + """ + The Freedman-Diaconis histogram bin estimator. + + The Freedman-Diaconis rule uses interquartile range (IQR) to + estimate binwidth. It is considered a variation of the Scott rule + with more robustness as the IQR is less affected by outliers than + the standard deviation. However, the IQR depends on fewer points + than the standard deviation, so it is less accurate, especially for + long tailed distributions. + + If the IQR is 0, this function returns 0 for the bin width. + Binwidth is inversely proportional to the cube root of data size + (asymptotically optimal). + + Parameters + ---------- + x : array_like + Input data that is to be histogrammed, trimmed to range. May not + be empty. + + Returns + ------- + h : An estimate of the optimal bin width for the given data. + """ + del range # unused + iqr = np.subtract(*np.percentile(x, [75, 25])) + return 2.0 * iqr * x.size ** (-1.0 / 3.0) + + +def _hist_bin_auto(x, range): + """ + Histogram bin estimator that uses the minimum width of the + Freedman-Diaconis and Sturges estimators if the FD bin width is non-zero. + If the bin width from the FD estimator is 0, the Sturges estimator is used. + + The FD estimator is usually the most robust method, but its width + estimate tends to be too large for small `x` and bad for data with limited + variance. The Sturges estimator is quite good for small (<1000) datasets + and is the default in the R language. This method gives good off-the-shelf + behaviour. + + .. versionchanged:: 1.15.0 + If there is limited variance the IQR can be 0, which results in the + FD bin width being 0 too. This is not a valid bin width, so + ``np.histogram_bin_edges`` chooses 1 bin instead, which may not be optimal. + If the IQR is 0, it's unlikely any variance-based estimators will be of + use, so we revert to the Sturges estimator, which only uses the size of the + dataset in its calculation. + + Parameters + ---------- + x : array_like + Input data that is to be histogrammed, trimmed to range. May not + be empty. + + Returns + ------- + h : An estimate of the optimal bin width for the given data. + + See Also + -------- + _hist_bin_fd, _hist_bin_sturges + """ + fd_bw = _hist_bin_fd(x, range) + sturges_bw = _hist_bin_sturges(x, range) + del range # unused + if fd_bw: + return min(fd_bw, sturges_bw) + else: + # limited variance, so we return a len dependent bw estimator + return sturges_bw + +# Private dict initialized at module load time +_hist_bin_selectors = {'stone': _hist_bin_stone, + 'auto': _hist_bin_auto, + 'doane': _hist_bin_doane, + 'fd': _hist_bin_fd, + 'rice': _hist_bin_rice, + 'scott': _hist_bin_scott, + 'sqrt': _hist_bin_sqrt, + 'sturges': _hist_bin_sturges} + + +def _ravel_and_check_weights(a, weights): + """ Check a and weights have matching shapes, and ravel both """ + a = np.asarray(a) + + # Ensure that the array is a "subtractable" dtype + if a.dtype == np.bool: + warnings.warn("Converting input from {} to {} for compatibility." + .format(a.dtype, np.uint8), + RuntimeWarning, stacklevel=3) + a = a.astype(np.uint8) + + if weights is not None: + weights = np.asarray(weights) + if weights.shape != a.shape: + raise ValueError( + 'weights should have the same shape as a.') + weights = weights.ravel() + a = a.ravel() + return a, weights + + +def _get_outer_edges(a, range): + """ + Determine the outer bin edges to use, from either the data or the range + argument + """ + if range is not None: + first_edge, last_edge = range + if first_edge > last_edge: + raise ValueError( + 'max must be larger than min in range parameter.') + if not (np.isfinite(first_edge) and np.isfinite(last_edge)): + raise ValueError( + "supplied range of [{}, {}] is not finite".format(first_edge, last_edge)) + elif a.size == 0: + # handle empty arrays. Can't determine range, so use 0-1. + first_edge, last_edge = 0, 1 + else: + first_edge, last_edge = a.min(), a.max() + if not (np.isfinite(first_edge) and np.isfinite(last_edge)): + raise ValueError( + "autodetected range of [{}, {}] is not finite".format(first_edge, last_edge)) + + # expand empty range to avoid divide by zero + if first_edge == last_edge: + first_edge = first_edge - 0.5 + last_edge = last_edge + 0.5 + + return first_edge, last_edge + + +def _unsigned_subtract(a, b): + """ + Subtract two values where a >= b, and produce an unsigned result + + This is needed when finding the difference between the upper and lower + bound of an int16 histogram + """ + # coerce to a single type + signed_to_unsigned = { + np.byte: np.ubyte, + np.short: np.ushort, + np.intc: np.uintc, + np.int_: np.uint, + np.longlong: np.ulonglong + } + dt = np.result_type(a, b) + try: + unsigned_dt = signed_to_unsigned[dt.type] + except KeyError: + return np.subtract(a, b, dtype=dt) + else: + # we know the inputs are integers, and we are deliberately casting + # signed to unsigned. The input may be negative python integers so + # ensure we pass in arrays with the initial dtype (related to NEP 50). + return np.subtract(np.asarray(a, dtype=dt), np.asarray(b, dtype=dt), + casting='unsafe', dtype=unsigned_dt) + + +def _get_bin_edges(a, bins, range, weights): + """ + Computes the bins used internally by `histogram`. + + Parameters + ========== + a : ndarray + Ravelled data array + bins, range + Forwarded arguments from `histogram`. + weights : ndarray, optional + Ravelled weights array, or None + + Returns + ======= + bin_edges : ndarray + Array of bin edges + uniform_bins : (Number, Number, int): + The upper bound, lowerbound, and number of bins, used in the optimized + implementation of `histogram` that works on uniform bins. + """ + # parse the overloaded bins argument + n_equal_bins = None + bin_edges = None + + if isinstance(bins, str): + bin_name = bins + # if `bins` is a string for an automatic method, + # this will replace it with the number of bins calculated + if bin_name not in _hist_bin_selectors: + raise ValueError( + "{!r} is not a valid estimator for `bins`".format(bin_name)) + if weights is not None: + raise TypeError("Automated estimation of the number of " + "bins is not supported for weighted data") + + first_edge, last_edge = _get_outer_edges(a, range) + + # truncate the range if needed + if range is not None: + keep = (a >= first_edge) + keep &= (a <= last_edge) + if not np.logical_and.reduce(keep): + a = a[keep] + + if a.size == 0: + n_equal_bins = 1 + else: + # Do not call selectors on empty arrays + width = _hist_bin_selectors[bin_name](a, (first_edge, last_edge)) + if width: + n_equal_bins = int(np.ceil(_unsigned_subtract(last_edge, first_edge) / width)) + else: + # Width can be zero for some estimators, e.g. FD when + # the IQR of the data is zero. + n_equal_bins = 1 + + elif np.ndim(bins) == 0: + try: + n_equal_bins = operator.index(bins) + except TypeError as e: + raise TypeError( + '`bins` must be an integer, a string, or an array') from e + if n_equal_bins < 1: + raise ValueError('`bins` must be positive, when an integer') + + first_edge, last_edge = _get_outer_edges(a, range) + + elif np.ndim(bins) == 1: + bin_edges = np.asarray(bins) + if np.any(bin_edges[:-1] > bin_edges[1:]): + raise ValueError( + '`bins` must increase monotonically, when an array') + + else: + raise ValueError('`bins` must be 1d, when an array') + + if n_equal_bins is not None: + # gh-10322 means that type resolution rules are dependent on array + # shapes. To avoid this causing problems, we pick a type now and stick + # with it throughout. + bin_type = np.result_type(first_edge, last_edge, a) + if np.issubdtype(bin_type, np.integer): + bin_type = np.result_type(bin_type, float) + + # bin edges must be computed + bin_edges = np.linspace( + first_edge, last_edge, n_equal_bins + 1, + endpoint=True, dtype=bin_type) + return bin_edges, (first_edge, last_edge, n_equal_bins) + else: + return bin_edges, None + + +def _search_sorted_inclusive(a, v): + """ + Like `searchsorted`, but where the last item in `v` is placed on the right. + + In the context of a histogram, this makes the last bin edge inclusive + """ + return np.concatenate(( + a.searchsorted(v[:-1], 'left'), + a.searchsorted(v[-1:], 'right') + )) + + +def _histogram_bin_edges_dispatcher(a, bins=None, range=None, weights=None): + return (a, bins, weights) + + +@array_function_dispatch(_histogram_bin_edges_dispatcher) +def histogram_bin_edges(a, bins=10, range=None, weights=None): + r""" + Function to calculate only the edges of the bins used by the `histogram` + function. + + Parameters + ---------- + a : array_like + Input data. The histogram is computed over the flattened array. + bins : int or sequence of scalars or str, optional + If `bins` is an int, it defines the number of equal-width + bins in the given range (10, by default). If `bins` is a + sequence, it defines the bin edges, including the rightmost + edge, allowing for non-uniform bin widths. + + If `bins` is a string from the list below, `histogram_bin_edges` will + use the method chosen to calculate the optimal bin width and + consequently the number of bins (see the Notes section for more detail + on the estimators) from the data that falls within the requested range. + While the bin width will be optimal for the actual data + in the range, the number of bins will be computed to fill the + entire range, including the empty portions. For visualisation, + using the 'auto' option is suggested. Weighted data is not + supported for automated bin size selection. + + 'auto' + Minimum bin width between the 'sturges' and 'fd' estimators. + Provides good all-around performance. + + 'fd' (Freedman Diaconis Estimator) + Robust (resilient to outliers) estimator that takes into + account data variability and data size. + + 'doane' + An improved version of Sturges' estimator that works better + with non-normal datasets. + + 'scott' + Less robust estimator that takes into account data variability + and data size. + + 'stone' + Estimator based on leave-one-out cross-validation estimate of + the integrated squared error. Can be regarded as a generalization + of Scott's rule. + + 'rice' + Estimator does not take variability into account, only data + size. Commonly overestimates number of bins required. + + 'sturges' + R's default method, only accounts for data size. Only + optimal for gaussian data and underestimates number of bins + for large non-gaussian datasets. + + 'sqrt' + Square root (of data size) estimator, used by Excel and + other programs for its speed and simplicity. + + range : (float, float), optional + The lower and upper range of the bins. If not provided, range + is simply ``(a.min(), a.max())``. Values outside the range are + ignored. The first element of the range must be less than or + equal to the second. `range` affects the automatic bin + computation as well. While bin width is computed to be optimal + based on the actual data within `range`, the bin count will fill + the entire range including portions containing no data. + + weights : array_like, optional + An array of weights, of the same shape as `a`. Each value in + `a` only contributes its associated weight towards the bin count + (instead of 1). This is currently not used by any of the bin estimators, + but may be in the future. + + Returns + ------- + bin_edges : array of dtype float + The edges to pass into `histogram` + + See Also + -------- + histogram + + Notes + ----- + The methods to estimate the optimal number of bins are well founded + in literature, and are inspired by the choices R provides for + histogram visualisation. Note that having the number of bins + proportional to :math:`n^{1/3}` is asymptotically optimal, which is + why it appears in most estimators. These are simply plug-in methods + that give good starting points for number of bins. In the equations + below, :math:`h` is the binwidth and :math:`n_h` is the number of + bins. All estimators that compute bin counts are recast to bin width + using the `ptp` of the data. The final bin count is obtained from + ``np.round(np.ceil(range / h))``. The final bin width is often less + than what is returned by the estimators below. + + 'auto' (minimum bin width of the 'sturges' and 'fd' estimators) + A compromise to get a good value. For small datasets the Sturges + value will usually be chosen, while larger datasets will usually + default to FD. Avoids the overly conservative behaviour of FD + and Sturges for small and large datasets respectively. + Switchover point is usually :math:`a.size \approx 1000`. + + 'fd' (Freedman Diaconis Estimator) + .. math:: h = 2 \frac{IQR}{n^{1/3}} + + The binwidth is proportional to the interquartile range (IQR) + and inversely proportional to cube root of a.size. Can be too + conservative for small datasets, but is quite good for large + datasets. The IQR is very robust to outliers. + + 'scott' + .. math:: h = \sigma \sqrt[3]{\frac{24 \sqrt{\pi}}{n}} + + The binwidth is proportional to the standard deviation of the + data and inversely proportional to cube root of ``x.size``. Can + be too conservative for small datasets, but is quite good for + large datasets. The standard deviation is not very robust to + outliers. Values are very similar to the Freedman-Diaconis + estimator in the absence of outliers. + + 'rice' + .. math:: n_h = 2n^{1/3} + + The number of bins is only proportional to cube root of + ``a.size``. It tends to overestimate the number of bins and it + does not take into account data variability. + + 'sturges' + .. math:: n_h = \log _{2}(n) + 1 + + The number of bins is the base 2 log of ``a.size``. This + estimator assumes normality of data and is too conservative for + larger, non-normal datasets. This is the default method in R's + ``hist`` method. + + 'doane' + .. math:: n_h = 1 + \log_{2}(n) + + \log_{2}\left(1 + \frac{|g_1|}{\sigma_{g_1}}\right) + + g_1 = mean\left[\left(\frac{x - \mu}{\sigma}\right)^3\right] + + \sigma_{g_1} = \sqrt{\frac{6(n - 2)}{(n + 1)(n + 3)}} + + An improved version of Sturges' formula that produces better + estimates for non-normal datasets. This estimator attempts to + account for the skew of the data. + + 'sqrt' + .. math:: n_h = \sqrt n + + The simplest and fastest estimator. Only takes into account the + data size. + + Examples + -------- + >>> arr = np.array([0, 0, 0, 1, 2, 3, 3, 4, 5]) + >>> np.histogram_bin_edges(arr, bins='auto', range=(0, 1)) + array([0. , 0.25, 0.5 , 0.75, 1. ]) + >>> np.histogram_bin_edges(arr, bins=2) + array([0. , 2.5, 5. ]) + + For consistency with histogram, an array of pre-computed bins is + passed through unmodified: + + >>> np.histogram_bin_edges(arr, [1, 2]) + array([1, 2]) + + This function allows one set of bins to be computed, and reused across + multiple histograms: + + >>> shared_bins = np.histogram_bin_edges(arr, bins='auto') + >>> shared_bins + array([0., 1., 2., 3., 4., 5.]) + + >>> group_id = np.array([0, 1, 1, 0, 1, 1, 0, 1, 1]) + >>> hist_0, _ = np.histogram(arr[group_id == 0], bins=shared_bins) + >>> hist_1, _ = np.histogram(arr[group_id == 1], bins=shared_bins) + + >>> hist_0; hist_1 + array([1, 1, 0, 1, 0]) + array([2, 0, 1, 1, 2]) + + Which gives more easily comparable results than using separate bins for + each histogram: + + >>> hist_0, bins_0 = np.histogram(arr[group_id == 0], bins='auto') + >>> hist_1, bins_1 = np.histogram(arr[group_id == 1], bins='auto') + >>> hist_0; hist_1 + array([1, 1, 1]) + array([2, 1, 1, 2]) + >>> bins_0; bins_1 + array([0., 1., 2., 3.]) + array([0. , 1.25, 2.5 , 3.75, 5. ]) + + """ + a, weights = _ravel_and_check_weights(a, weights) + bin_edges, _ = _get_bin_edges(a, bins, range, weights) + return bin_edges + + +def _histogram_dispatcher( + a, bins=None, range=None, density=None, weights=None): + return (a, bins, weights) + + +@array_function_dispatch(_histogram_dispatcher) +def histogram(a, bins=10, range=None, density=None, weights=None): + r""" + Compute the histogram of a dataset. + + Parameters + ---------- + a : array_like + Input data. The histogram is computed over the flattened array. + bins : int or sequence of scalars or str, optional + If `bins` is an int, it defines the number of equal-width + bins in the given range (10, by default). If `bins` is a + sequence, it defines a monotonically increasing array of bin edges, + including the rightmost edge, allowing for non-uniform bin widths. + + .. versionadded:: 1.11.0 + + If `bins` is a string, it defines the method used to calculate the + optimal bin width, as defined by `histogram_bin_edges`. + + range : (float, float), optional + The lower and upper range of the bins. If not provided, range + is simply ``(a.min(), a.max())``. Values outside the range are + ignored. The first element of the range must be less than or + equal to the second. `range` affects the automatic bin + computation as well. While bin width is computed to be optimal + based on the actual data within `range`, the bin count will fill + the entire range including portions containing no data. + weights : array_like, optional + An array of weights, of the same shape as `a`. Each value in + `a` only contributes its associated weight towards the bin count + (instead of 1). If `density` is True, the weights are + normalized, so that the integral of the density over the range + remains 1. + Please note that the ``dtype`` of `weights` will also become the + ``dtype`` of the returned accumulator (`hist`), so it must be + large enough to hold accumulated values as well. + density : bool, optional + If ``False``, the result will contain the number of samples in + each bin. If ``True``, the result is the value of the + probability *density* function at the bin, normalized such that + the *integral* over the range is 1. Note that the sum of the + histogram values will not be equal to 1 unless bins of unity + width are chosen; it is not a probability *mass* function. + + Returns + ------- + hist : array + The values of the histogram. See `density` and `weights` for a + description of the possible semantics. If `weights` are given, + ``hist.dtype`` will be taken from `weights`. + bin_edges : array of dtype float + Return the bin edges ``(length(hist)+1)``. + + + See Also + -------- + histogramdd, bincount, searchsorted, digitize, histogram_bin_edges + + Notes + ----- + All but the last (righthand-most) bin is half-open. In other words, + if `bins` is:: + + [1, 2, 3, 4] + + then the first bin is ``[1, 2)`` (including 1, but excluding 2) and + the second ``[2, 3)``. The last bin, however, is ``[3, 4]``, which + *includes* 4. + + + Examples + -------- + >>> np.histogram([1, 2, 1], bins=[0, 1, 2, 3]) + (array([0, 2, 1]), array([0, 1, 2, 3])) + >>> np.histogram(np.arange(4), bins=np.arange(5), density=True) + (array([0.25, 0.25, 0.25, 0.25]), array([0, 1, 2, 3, 4])) + >>> np.histogram([[1, 2, 1], [1, 0, 1]], bins=[0,1,2,3]) + (array([1, 4, 1]), array([0, 1, 2, 3])) + + >>> a = np.arange(5) + >>> hist, bin_edges = np.histogram(a, density=True) + >>> hist + array([0.5, 0. , 0.5, 0. , 0. , 0.5, 0. , 0.5, 0. , 0.5]) + >>> hist.sum() + 2.4999999999999996 + >>> np.sum(hist * np.diff(bin_edges)) + 1.0 + + .. versionadded:: 1.11.0 + + Automated Bin Selection Methods example, using 2 peak random data + with 2000 points. + + .. plot:: + :include-source: + + import matplotlib.pyplot as plt + import numpy as np + + rng = np.random.RandomState(10) # deterministic random data + a = np.hstack((rng.normal(size=1000), + rng.normal(loc=5, scale=2, size=1000))) + plt.hist(a, bins='auto') # arguments are passed to np.histogram + plt.title("Histogram with 'auto' bins") + plt.show() + + """ + a, weights = _ravel_and_check_weights(a, weights) + + bin_edges, uniform_bins = _get_bin_edges(a, bins, range, weights) + + # Histogram is an integer or a float array depending on the weights. + if weights is None: + ntype = np.dtype(np.intp) + else: + ntype = weights.dtype + + # We set a block size, as this allows us to iterate over chunks when + # computing histograms, to minimize memory usage. + BLOCK = 65536 + + # The fast path uses bincount, but that only works for certain types + # of weight + simple_weights = ( + weights is None or + np.can_cast(weights.dtype, np.double) or + np.can_cast(weights.dtype, complex) + ) + + if uniform_bins is not None and simple_weights: + # Fast algorithm for equal bins + # We now convert values of a to bin indices, under the assumption of + # equal bin widths (which is valid here). + first_edge, last_edge, n_equal_bins = uniform_bins + + # Initialize empty histogram + n = np.zeros(n_equal_bins, ntype) + + # Pre-compute histogram scaling factor + norm_numerator = n_equal_bins + norm_denom = _unsigned_subtract(last_edge, first_edge) + + # We iterate over blocks here for two reasons: the first is that for + # large arrays, it is actually faster (for example for a 10^8 array it + # is 2x as fast) and it results in a memory footprint 3x lower in the + # limit of large arrays. + for i in _range(0, len(a), BLOCK): + tmp_a = a[i:i+BLOCK] + if weights is None: + tmp_w = None + else: + tmp_w = weights[i:i + BLOCK] + + # Only include values in the right range + keep = (tmp_a >= first_edge) + keep &= (tmp_a <= last_edge) + if not np.logical_and.reduce(keep): + tmp_a = tmp_a[keep] + if tmp_w is not None: + tmp_w = tmp_w[keep] + + # This cast ensures no type promotions occur below, which gh-10322 + # make unpredictable. Getting it wrong leads to precision errors + # like gh-8123. + tmp_a = tmp_a.astype(bin_edges.dtype, copy=False) + + # Compute the bin indices, and for values that lie exactly on + # last_edge we need to subtract one + f_indices = ((_unsigned_subtract(tmp_a, first_edge) / norm_denom) + * norm_numerator) + indices = f_indices.astype(np.intp) + indices[indices == n_equal_bins] -= 1 + + # The index computation is not guaranteed to give exactly + # consistent results within ~1 ULP of the bin edges. + decrement = tmp_a < bin_edges[indices] + indices[decrement] -= 1 + # The last bin includes the right edge. The other bins do not. + increment = ((tmp_a >= bin_edges[indices + 1]) + & (indices != n_equal_bins - 1)) + indices[increment] += 1 + + # We now compute the histogram using bincount + if ntype.kind == 'c': + n.real += np.bincount(indices, weights=tmp_w.real, + minlength=n_equal_bins) + n.imag += np.bincount(indices, weights=tmp_w.imag, + minlength=n_equal_bins) + else: + n += np.bincount(indices, weights=tmp_w, + minlength=n_equal_bins).astype(ntype) + else: + # Compute via cumulative histogram + cum_n = np.zeros(bin_edges.shape, ntype) + if weights is None: + for i in _range(0, len(a), BLOCK): + sa = np.sort(a[i:i+BLOCK]) + cum_n += _search_sorted_inclusive(sa, bin_edges) + else: + zero = np.zeros(1, dtype=ntype) + for i in _range(0, len(a), BLOCK): + tmp_a = a[i:i+BLOCK] + tmp_w = weights[i:i+BLOCK] + sorting_index = np.argsort(tmp_a) + sa = tmp_a[sorting_index] + sw = tmp_w[sorting_index] + cw = np.concatenate((zero, sw.cumsum())) + bin_index = _search_sorted_inclusive(sa, bin_edges) + cum_n += cw[bin_index] + + n = np.diff(cum_n) + + if density: + db = np.array(np.diff(bin_edges), float) + return n/db/n.sum(), bin_edges + + return n, bin_edges + + +def _histogramdd_dispatcher(sample, bins=None, range=None, density=None, + weights=None): + if hasattr(sample, 'shape'): # same condition as used in histogramdd + yield sample + else: + yield from sample + with contextlib.suppress(TypeError): + yield from bins + yield weights + + +@array_function_dispatch(_histogramdd_dispatcher) +def histogramdd(sample, bins=10, range=None, density=None, weights=None): + """ + Compute the multidimensional histogram of some data. + + Parameters + ---------- + sample : (N, D) array, or (N, D) array_like + The data to be histogrammed. + + Note the unusual interpretation of sample when an array_like: + + * When an array, each row is a coordinate in a D-dimensional space - + such as ``histogramdd(np.array([p1, p2, p3]))``. + * When an array_like, each element is the list of values for single + coordinate - such as ``histogramdd((X, Y, Z))``. + + The first form should be preferred. + + bins : sequence or int, optional + The bin specification: + + * A sequence of arrays describing the monotonically increasing bin + edges along each dimension. + * The number of bins for each dimension (nx, ny, ... =bins) + * The number of bins for all dimensions (nx=ny=...=bins). + + range : sequence, optional + A sequence of length D, each an optional (lower, upper) tuple giving + the outer bin edges to be used if the edges are not given explicitly in + `bins`. + An entry of None in the sequence results in the minimum and maximum + values being used for the corresponding dimension. + The default, None, is equivalent to passing a tuple of D None values. + density : bool, optional + If False, the default, returns the number of samples in each bin. + If True, returns the probability *density* function at the bin, + ``bin_count / sample_count / bin_volume``. + weights : (N,) array_like, optional + An array of values `w_i` weighing each sample `(x_i, y_i, z_i, ...)`. + Weights are normalized to 1 if density is True. If density is False, + the values of the returned histogram are equal to the sum of the + weights belonging to the samples falling into each bin. + + Returns + ------- + H : ndarray + The multidimensional histogram of sample x. See density and weights + for the different possible semantics. + edges : tuple of ndarrays + A tuple of D arrays describing the bin edges for each dimension. + + See Also + -------- + histogram: 1-D histogram + histogram2d: 2-D histogram + + Examples + -------- + >>> r = np.random.randn(100,3) + >>> H, edges = np.histogramdd(r, bins = (5, 8, 4)) + >>> H.shape, edges[0].size, edges[1].size, edges[2].size + ((5, 8, 4), 6, 9, 5) + + """ + + try: + # Sample is an ND-array. + N, D = sample.shape + except (AttributeError, ValueError): + # Sample is a sequence of 1D arrays. + sample = np.atleast_2d(sample).T + N, D = sample.shape + + nbin = np.empty(D, np.intp) + edges = D*[None] + dedges = D*[None] + if weights is not None: + weights = np.asarray(weights) + + try: + M = len(bins) + if M != D: + raise ValueError( + 'The dimension of bins must be equal to the dimension of the ' + 'sample x.') + except TypeError: + # bins is an integer + bins = D*[bins] + + # normalize the range argument + if range is None: + range = (None,) * D + elif len(range) != D: + raise ValueError('range argument must have one entry per dimension') + + # Create edge arrays + for i in _range(D): + if np.ndim(bins[i]) == 0: + if bins[i] < 1: + raise ValueError( + '`bins[{}]` must be positive, when an integer'.format(i)) + smin, smax = _get_outer_edges(sample[:,i], range[i]) + try: + n = operator.index(bins[i]) + + except TypeError as e: + raise TypeError( + "`bins[{}]` must be an integer, when a scalar".format(i) + ) from e + + edges[i] = np.linspace(smin, smax, n + 1) + elif np.ndim(bins[i]) == 1: + edges[i] = np.asarray(bins[i]) + if np.any(edges[i][:-1] > edges[i][1:]): + raise ValueError( + '`bins[{}]` must be monotonically increasing, when an array' + .format(i)) + else: + raise ValueError( + '`bins[{}]` must be a scalar or 1d array'.format(i)) + + nbin[i] = len(edges[i]) + 1 # includes an outlier on each end + dedges[i] = np.diff(edges[i]) + + # Compute the bin number each sample falls into. + Ncount = tuple( + # avoid np.digitize to work around gh-11022 + np.searchsorted(edges[i], sample[:, i], side='right') + for i in _range(D) + ) + + # Using digitize, values that fall on an edge are put in the right bin. + # For the rightmost bin, we want values equal to the right edge to be + # counted in the last bin, and not as an outlier. + for i in _range(D): + # Find which points are on the rightmost edge. + on_edge = (sample[:, i] == edges[i][-1]) + # Shift these points one bin to the left. + Ncount[i][on_edge] -= 1 + + # Compute the sample indices in the flattened histogram matrix. + # This raises an error if the array is too large. + xy = np.ravel_multi_index(Ncount, nbin) + + # Compute the number of repetitions in xy and assign it to the + # flattened histmat. + hist = np.bincount(xy, weights, minlength=nbin.prod()) + + # Shape into a proper matrix + hist = hist.reshape(nbin) + + # This preserves the (bad) behavior observed in gh-7845, for now. + hist = hist.astype(float, casting='safe') + + # Remove outliers (indices 0 and -1 for each dimension). + core = D*(slice(1, -1),) + hist = hist[core] + + if density: + # calculate the probability density function + s = hist.sum() + for i in _range(D): + shape = np.ones(D, int) + shape[i] = nbin[i] - 2 + hist = hist / dedges[i].reshape(shape) + hist /= s + + if (hist.shape != nbin - 2).any(): + raise RuntimeError( + "Internal Shape Error") + return hist, edges diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_histograms_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_histograms_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..138cdb115ef56e73c2b737128f57f06df4445c5f --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_histograms_impl.pyi @@ -0,0 +1,47 @@ +from collections.abc import Sequence +from typing import ( + Literal as L, + Any, + SupportsIndex, +) + +from numpy._typing import ( + NDArray, + ArrayLike, +) + +_BinKind = L[ + "stone", + "auto", + "doane", + "fd", + "rice", + "scott", + "sqrt", + "sturges", +] + +__all__: list[str] + +def histogram_bin_edges( + a: ArrayLike, + bins: _BinKind | SupportsIndex | ArrayLike = ..., + range: None | tuple[float, float] = ..., + weights: None | ArrayLike = ..., +) -> NDArray[Any]: ... + +def histogram( + a: ArrayLike, + bins: _BinKind | SupportsIndex | ArrayLike = ..., + range: None | tuple[float, float] = ..., + density: bool = ..., + weights: None | ArrayLike = ..., +) -> tuple[NDArray[Any], NDArray[Any]]: ... + +def histogramdd( + sample: ArrayLike, + bins: SupportsIndex | ArrayLike = ..., + range: Sequence[tuple[float, float]] = ..., + density: None | bool = ..., + weights: None | ArrayLike = ..., +) -> tuple[NDArray[Any], tuple[NDArray[Any], ...]]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_index_tricks_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_index_tricks_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..62f1d213b29ff0b10ebf8a1ce28e4d0cdb3ef4ba --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_index_tricks_impl.py @@ -0,0 +1,1059 @@ +import functools +import sys +import math +import warnings + +import numpy as np +from .._utils import set_module +import numpy._core.numeric as _nx +from numpy._core.numeric import ScalarType, array +from numpy._core.numerictypes import issubdtype + +import numpy.matrixlib as matrixlib +from numpy._core.multiarray import ravel_multi_index, unravel_index +from numpy._core import overrides, linspace +from numpy.lib.stride_tricks import as_strided +from numpy.lib._function_base_impl import diff + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +__all__ = [ + 'ravel_multi_index', 'unravel_index', 'mgrid', 'ogrid', 'r_', 'c_', + 's_', 'index_exp', 'ix_', 'ndenumerate', 'ndindex', 'fill_diagonal', + 'diag_indices', 'diag_indices_from' +] + + +def _ix__dispatcher(*args): + return args + + +@array_function_dispatch(_ix__dispatcher) +def ix_(*args): + """ + Construct an open mesh from multiple sequences. + + This function takes N 1-D sequences and returns N outputs with N + dimensions each, such that the shape is 1 in all but one dimension + and the dimension with the non-unit shape value cycles through all + N dimensions. + + Using `ix_` one can quickly construct index arrays that will index + the cross product. ``a[np.ix_([1,3],[2,5])]`` returns the array + ``[[a[1,2] a[1,5]], [a[3,2] a[3,5]]]``. + + Parameters + ---------- + args : 1-D sequences + Each sequence should be of integer or boolean type. + Boolean sequences will be interpreted as boolean masks for the + corresponding dimension (equivalent to passing in + ``np.nonzero(boolean_sequence)``). + + Returns + ------- + out : tuple of ndarrays + N arrays with N dimensions each, with N the number of input + sequences. Together these arrays form an open mesh. + + See Also + -------- + ogrid, mgrid, meshgrid + + Examples + -------- + >>> a = np.arange(10).reshape(2, 5) + >>> a + array([[0, 1, 2, 3, 4], + [5, 6, 7, 8, 9]]) + >>> ixgrid = np.ix_([0, 1], [2, 4]) + >>> ixgrid + (array([[0], + [1]]), array([[2, 4]])) + >>> ixgrid[0].shape, ixgrid[1].shape + ((2, 1), (1, 2)) + >>> a[ixgrid] + array([[2, 4], + [7, 9]]) + + >>> ixgrid = np.ix_([True, True], [2, 4]) + >>> a[ixgrid] + array([[2, 4], + [7, 9]]) + >>> ixgrid = np.ix_([True, True], [False, False, True, False, True]) + >>> a[ixgrid] + array([[2, 4], + [7, 9]]) + + """ + out = [] + nd = len(args) + for k, new in enumerate(args): + if not isinstance(new, _nx.ndarray): + new = np.asarray(new) + if new.size == 0: + # Explicitly type empty arrays to avoid float default + new = new.astype(_nx.intp) + if new.ndim != 1: + raise ValueError("Cross index must be 1 dimensional") + if issubdtype(new.dtype, _nx.bool): + new, = new.nonzero() + new = new.reshape((1,)*k + (new.size,) + (1,)*(nd-k-1)) + out.append(new) + return tuple(out) + + +class nd_grid: + """ + Construct a multi-dimensional "meshgrid". + + ``grid = nd_grid()`` creates an instance which will return a mesh-grid + when indexed. The dimension and number of the output arrays are equal + to the number of indexing dimensions. If the step length is not a + complex number, then the stop is not inclusive. + + However, if the step length is a **complex number** (e.g. 5j), then the + integer part of its magnitude is interpreted as specifying the + number of points to create between the start and stop values, where + the stop value **is inclusive**. + + If instantiated with an argument of ``sparse=True``, the mesh-grid is + open (or not fleshed out) so that only one-dimension of each returned + argument is greater than 1. + + Parameters + ---------- + sparse : bool, optional + Whether the grid is sparse or not. Default is False. + + Notes + ----- + Two instances of `nd_grid` are made available in the NumPy namespace, + `mgrid` and `ogrid`, approximately defined as:: + + mgrid = nd_grid(sparse=False) + ogrid = nd_grid(sparse=True) + + Users should use these pre-defined instances instead of using `nd_grid` + directly. + """ + + def __init__(self, sparse=False): + self.sparse = sparse + + def __getitem__(self, key): + try: + size = [] + # Mimic the behavior of `np.arange` and use a data type + # which is at least as large as `np.int_` + num_list = [0] + for k in range(len(key)): + step = key[k].step + start = key[k].start + stop = key[k].stop + if start is None: + start = 0 + if step is None: + step = 1 + if isinstance(step, (_nx.complexfloating, complex)): + step = abs(step) + size.append(int(step)) + else: + size.append( + int(math.ceil((stop - start) / (step*1.0)))) + num_list += [start, stop, step] + typ = _nx.result_type(*num_list) + if self.sparse: + nn = [_nx.arange(_x, dtype=_t) + for _x, _t in zip(size, (typ,)*len(size))] + else: + nn = _nx.indices(size, typ) + for k, kk in enumerate(key): + step = kk.step + start = kk.start + if start is None: + start = 0 + if step is None: + step = 1 + if isinstance(step, (_nx.complexfloating, complex)): + step = int(abs(step)) + if step != 1: + step = (kk.stop - start) / float(step - 1) + nn[k] = (nn[k]*step+start) + if self.sparse: + slobj = [_nx.newaxis]*len(size) + for k in range(len(size)): + slobj[k] = slice(None, None) + nn[k] = nn[k][tuple(slobj)] + slobj[k] = _nx.newaxis + return tuple(nn) # ogrid -> tuple of arrays + return nn # mgrid -> ndarray + except (IndexError, TypeError): + step = key.step + stop = key.stop + start = key.start + if start is None: + start = 0 + if isinstance(step, (_nx.complexfloating, complex)): + # Prevent the (potential) creation of integer arrays + step_float = abs(step) + step = length = int(step_float) + if step != 1: + step = (key.stop-start)/float(step-1) + typ = _nx.result_type(start, stop, step_float) + return _nx.arange(0, length, 1, dtype=typ)*step + start + else: + return _nx.arange(start, stop, step) + + +class MGridClass(nd_grid): + """ + An instance which returns a dense multi-dimensional "meshgrid". + + An instance which returns a dense (or fleshed out) mesh-grid + when indexed, so that each returned argument has the same shape. + The dimensions and number of the output arrays are equal to the + number of indexing dimensions. If the step length is not a complex + number, then the stop is not inclusive. + + However, if the step length is a **complex number** (e.g. 5j), then + the integer part of its magnitude is interpreted as specifying the + number of points to create between the start and stop values, where + the stop value **is inclusive**. + + Returns + ------- + mesh-grid : ndarray + A single array, containing a set of `ndarray`\\ s all of the same + dimensions. stacked along the first axis. + + See Also + -------- + ogrid : like `mgrid` but returns open (not fleshed out) mesh grids + meshgrid: return coordinate matrices from coordinate vectors + r_ : array concatenator + :ref:`how-to-partition` + + Examples + -------- + >>> np.mgrid[0:5, 0:5] + array([[[0, 0, 0, 0, 0], + [1, 1, 1, 1, 1], + [2, 2, 2, 2, 2], + [3, 3, 3, 3, 3], + [4, 4, 4, 4, 4]], + [[0, 1, 2, 3, 4], + [0, 1, 2, 3, 4], + [0, 1, 2, 3, 4], + [0, 1, 2, 3, 4], + [0, 1, 2, 3, 4]]]) + >>> np.mgrid[-1:1:5j] + array([-1. , -0.5, 0. , 0.5, 1. ]) + + >>> np.mgrid[0:4].shape + (4,) + >>> np.mgrid[0:4, 0:5].shape + (2, 4, 5) + >>> np.mgrid[0:4, 0:5, 0:6].shape + (3, 4, 5, 6) + + """ + + def __init__(self): + super().__init__(sparse=False) + + +mgrid = MGridClass() + + +class OGridClass(nd_grid): + """ + An instance which returns an open multi-dimensional "meshgrid". + + An instance which returns an open (i.e. not fleshed out) mesh-grid + when indexed, so that only one dimension of each returned array is + greater than 1. The dimension and number of the output arrays are + equal to the number of indexing dimensions. If the step length is + not a complex number, then the stop is not inclusive. + + However, if the step length is a **complex number** (e.g. 5j), then + the integer part of its magnitude is interpreted as specifying the + number of points to create between the start and stop values, where + the stop value **is inclusive**. + + Returns + ------- + mesh-grid : ndarray or tuple of ndarrays + If the input is a single slice, returns an array. + If the input is multiple slices, returns a tuple of arrays, with + only one dimension not equal to 1. + + See Also + -------- + mgrid : like `ogrid` but returns dense (or fleshed out) mesh grids + meshgrid: return coordinate matrices from coordinate vectors + r_ : array concatenator + :ref:`how-to-partition` + + Examples + -------- + >>> from numpy import ogrid + >>> ogrid[-1:1:5j] + array([-1. , -0.5, 0. , 0.5, 1. ]) + >>> ogrid[0:5, 0:5] + (array([[0], + [1], + [2], + [3], + [4]]), + array([[0, 1, 2, 3, 4]])) + + """ + + def __init__(self): + super().__init__(sparse=True) + + +ogrid = OGridClass() + + +class AxisConcatenator: + """ + Translates slice objects to concatenation along an axis. + + For detailed documentation on usage, see `r_`. + """ + # allow ma.mr_ to override this + concatenate = staticmethod(_nx.concatenate) + makemat = staticmethod(matrixlib.matrix) + + def __init__(self, axis=0, matrix=False, ndmin=1, trans1d=-1): + self.axis = axis + self.matrix = matrix + self.trans1d = trans1d + self.ndmin = ndmin + + def __getitem__(self, key): + # handle matrix builder syntax + if isinstance(key, str): + frame = sys._getframe().f_back + mymat = matrixlib.bmat(key, frame.f_globals, frame.f_locals) + return mymat + + if not isinstance(key, tuple): + key = (key,) + + # copy attributes, since they can be overridden in the first argument + trans1d = self.trans1d + ndmin = self.ndmin + matrix = self.matrix + axis = self.axis + + objs = [] + # dtypes or scalars for weak scalar handling in result_type + result_type_objs = [] + + for k, item in enumerate(key): + scalar = False + if isinstance(item, slice): + step = item.step + start = item.start + stop = item.stop + if start is None: + start = 0 + if step is None: + step = 1 + if isinstance(step, (_nx.complexfloating, complex)): + size = int(abs(step)) + newobj = linspace(start, stop, num=size) + else: + newobj = _nx.arange(start, stop, step) + if ndmin > 1: + newobj = array(newobj, copy=None, ndmin=ndmin) + if trans1d != -1: + newobj = newobj.swapaxes(-1, trans1d) + elif isinstance(item, str): + if k != 0: + raise ValueError("special directives must be the " + "first entry.") + if item in ('r', 'c'): + matrix = True + col = (item == 'c') + continue + if ',' in item: + vec = item.split(',') + try: + axis, ndmin = [int(x) for x in vec[:2]] + if len(vec) == 3: + trans1d = int(vec[2]) + continue + except Exception as e: + raise ValueError( + "unknown special directive {!r}".format(item) + ) from e + try: + axis = int(item) + continue + except (ValueError, TypeError) as e: + raise ValueError("unknown special directive") from e + elif type(item) in ScalarType: + scalar = True + newobj = item + else: + item_ndim = np.ndim(item) + newobj = array(item, copy=None, subok=True, ndmin=ndmin) + if trans1d != -1 and item_ndim < ndmin: + k2 = ndmin - item_ndim + k1 = trans1d + if k1 < 0: + k1 += k2 + 1 + defaxes = list(range(ndmin)) + axes = defaxes[:k1] + defaxes[k2:] + defaxes[k1:k2] + newobj = newobj.transpose(axes) + + objs.append(newobj) + if scalar: + result_type_objs.append(item) + else: + result_type_objs.append(newobj.dtype) + + # Ensure that scalars won't up-cast unless warranted, for 0, drops + # through to error in concatenate. + if len(result_type_objs) != 0: + final_dtype = _nx.result_type(*result_type_objs) + # concatenate could do cast, but that can be overridden: + objs = [array(obj, copy=None, subok=True, + ndmin=ndmin, dtype=final_dtype) for obj in objs] + + res = self.concatenate(tuple(objs), axis=axis) + + if matrix: + oldndim = res.ndim + res = self.makemat(res) + if oldndim == 1 and col: + res = res.T + return res + + def __len__(self): + return 0 + +# separate classes are used here instead of just making r_ = concatentor(0), +# etc. because otherwise we couldn't get the doc string to come out right +# in help(r_) + + +class RClass(AxisConcatenator): + """ + Translates slice objects to concatenation along the first axis. + + This is a simple way to build up arrays quickly. There are two use cases. + + 1. If the index expression contains comma separated arrays, then stack + them along their first axis. + 2. If the index expression contains slice notation or scalars then create + a 1-D array with a range indicated by the slice notation. + + If slice notation is used, the syntax ``start:stop:step`` is equivalent + to ``np.arange(start, stop, step)`` inside of the brackets. However, if + ``step`` is an imaginary number (i.e. 100j) then its integer portion is + interpreted as a number-of-points desired and the start and stop are + inclusive. In other words ``start:stop:stepj`` is interpreted as + ``np.linspace(start, stop, step, endpoint=1)`` inside of the brackets. + After expansion of slice notation, all comma separated sequences are + concatenated together. + + Optional character strings placed as the first element of the index + expression can be used to change the output. The strings 'r' or 'c' result + in matrix output. If the result is 1-D and 'r' is specified a 1 x N (row) + matrix is produced. If the result is 1-D and 'c' is specified, then a N x 1 + (column) matrix is produced. If the result is 2-D then both provide the + same matrix result. + + A string integer specifies which axis to stack multiple comma separated + arrays along. A string of two comma-separated integers allows indication + of the minimum number of dimensions to force each entry into as the + second integer (the axis to concatenate along is still the first integer). + + A string with three comma-separated integers allows specification of the + axis to concatenate along, the minimum number of dimensions to force the + entries to, and which axis should contain the start of the arrays which + are less than the specified number of dimensions. In other words the third + integer allows you to specify where the 1's should be placed in the shape + of the arrays that have their shapes upgraded. By default, they are placed + in the front of the shape tuple. The third argument allows you to specify + where the start of the array should be instead. Thus, a third argument of + '0' would place the 1's at the end of the array shape. Negative integers + specify where in the new shape tuple the last dimension of upgraded arrays + should be placed, so the default is '-1'. + + Parameters + ---------- + Not a function, so takes no parameters + + + Returns + ------- + A concatenated ndarray or matrix. + + See Also + -------- + concatenate : Join a sequence of arrays along an existing axis. + c_ : Translates slice objects to concatenation along the second axis. + + Examples + -------- + >>> np.r_[np.array([1,2,3]), 0, 0, np.array([4,5,6])] + array([1, 2, 3, ..., 4, 5, 6]) + >>> np.r_[-1:1:6j, [0]*3, 5, 6] + array([-1. , -0.6, -0.2, 0.2, 0.6, 1. , 0. , 0. , 0. , 5. , 6. ]) + + String integers specify the axis to concatenate along or the minimum + number of dimensions to force entries into. + + >>> a = np.array([[0, 1, 2], [3, 4, 5]]) + >>> np.r_['-1', a, a] # concatenate along last axis + array([[0, 1, 2, 0, 1, 2], + [3, 4, 5, 3, 4, 5]]) + >>> np.r_['0,2', [1,2,3], [4,5,6]] # concatenate along first axis, dim>=2 + array([[1, 2, 3], + [4, 5, 6]]) + + >>> np.r_['0,2,0', [1,2,3], [4,5,6]] + array([[1], + [2], + [3], + [4], + [5], + [6]]) + >>> np.r_['1,2,0', [1,2,3], [4,5,6]] + array([[1, 4], + [2, 5], + [3, 6]]) + + Using 'r' or 'c' as a first string argument creates a matrix. + + >>> np.r_['r',[1,2,3], [4,5,6]] + matrix([[1, 2, 3, 4, 5, 6]]) + + """ + + def __init__(self): + AxisConcatenator.__init__(self, 0) + + +r_ = RClass() + + +class CClass(AxisConcatenator): + """ + Translates slice objects to concatenation along the second axis. + + This is short-hand for ``np.r_['-1,2,0', index expression]``, which is + useful because of its common occurrence. In particular, arrays will be + stacked along their last axis after being upgraded to at least 2-D with + 1's post-pended to the shape (column vectors made out of 1-D arrays). + + See Also + -------- + column_stack : Stack 1-D arrays as columns into a 2-D array. + r_ : For more detailed documentation. + + Examples + -------- + >>> np.c_[np.array([1,2,3]), np.array([4,5,6])] + array([[1, 4], + [2, 5], + [3, 6]]) + >>> np.c_[np.array([[1,2,3]]), 0, 0, np.array([[4,5,6]])] + array([[1, 2, 3, ..., 4, 5, 6]]) + + """ + + def __init__(self): + AxisConcatenator.__init__(self, -1, ndmin=2, trans1d=0) + + +c_ = CClass() + + +@set_module('numpy') +class ndenumerate: + """ + Multidimensional index iterator. + + Return an iterator yielding pairs of array coordinates and values. + + Parameters + ---------- + arr : ndarray + Input array. + + See Also + -------- + ndindex, flatiter + + Examples + -------- + >>> a = np.array([[1, 2], [3, 4]]) + >>> for index, x in np.ndenumerate(a): + ... print(index, x) + (0, 0) 1 + (0, 1) 2 + (1, 0) 3 + (1, 1) 4 + + """ + + def __init__(self, arr): + self.iter = np.asarray(arr).flat + + def __next__(self): + """ + Standard iterator method, returns the index tuple and array value. + + Returns + ------- + coords : tuple of ints + The indices of the current iteration. + val : scalar + The array element of the current iteration. + + """ + return self.iter.coords, next(self.iter) + + def __iter__(self): + return self + + +@set_module('numpy') +class ndindex: + """ + An N-dimensional iterator object to index arrays. + + Given the shape of an array, an `ndindex` instance iterates over + the N-dimensional index of the array. At each iteration a tuple + of indices is returned, the last dimension is iterated over first. + + Parameters + ---------- + shape : ints, or a single tuple of ints + The size of each dimension of the array can be passed as + individual parameters or as the elements of a tuple. + + See Also + -------- + ndenumerate, flatiter + + Examples + -------- + Dimensions as individual arguments + + >>> for index in np.ndindex(3, 2, 1): + ... print(index) + (0, 0, 0) + (0, 1, 0) + (1, 0, 0) + (1, 1, 0) + (2, 0, 0) + (2, 1, 0) + + Same dimensions - but in a tuple ``(3, 2, 1)`` + + >>> for index in np.ndindex((3, 2, 1)): + ... print(index) + (0, 0, 0) + (0, 1, 0) + (1, 0, 0) + (1, 1, 0) + (2, 0, 0) + (2, 1, 0) + + """ + + def __init__(self, *shape): + if len(shape) == 1 and isinstance(shape[0], tuple): + shape = shape[0] + x = as_strided(_nx.zeros(1), shape=shape, + strides=_nx.zeros_like(shape)) + self._it = _nx.nditer(x, flags=['multi_index', 'zerosize_ok'], + order='C') + + def __iter__(self): + return self + + def ndincr(self): + """ + Increment the multi-dimensional index by one. + + This method is for backward compatibility only: do not use. + + .. deprecated:: 1.20.0 + This method has been advised against since numpy 1.8.0, but only + started emitting DeprecationWarning as of this version. + """ + # NumPy 1.20.0, 2020-09-08 + warnings.warn( + "`ndindex.ndincr()` is deprecated, use `next(ndindex)` instead", + DeprecationWarning, stacklevel=2) + next(self) + + def __next__(self): + """ + Standard iterator method, updates the index and returns the index + tuple. + + Returns + ------- + val : tuple of ints + Returns a tuple containing the indices of the current + iteration. + + """ + next(self._it) + return self._it.multi_index + + +# You can do all this with slice() plus a few special objects, +# but there's a lot to remember. This version is simpler because +# it uses the standard array indexing syntax. +# +# Written by Konrad Hinsen +# last revision: 1999-7-23 +# +# Cosmetic changes by T. Oliphant 2001 +# +# + +class IndexExpression: + """ + A nicer way to build up index tuples for arrays. + + .. note:: + Use one of the two predefined instances ``index_exp`` or `s_` + rather than directly using `IndexExpression`. + + For any index combination, including slicing and axis insertion, + ``a[indices]`` is the same as ``a[np.index_exp[indices]]`` for any + array `a`. However, ``np.index_exp[indices]`` can be used anywhere + in Python code and returns a tuple of slice objects that can be + used in the construction of complex index expressions. + + Parameters + ---------- + maketuple : bool + If True, always returns a tuple. + + See Also + -------- + s_ : Predefined instance without tuple conversion: + `s_ = IndexExpression(maketuple=False)`. + The ``index_exp`` is another predefined instance that + always returns a tuple: + `index_exp = IndexExpression(maketuple=True)`. + + Notes + ----- + You can do all this with :class:`slice` plus a few special objects, + but there's a lot to remember and this version is simpler because + it uses the standard array indexing syntax. + + Examples + -------- + >>> np.s_[2::2] + slice(2, None, 2) + >>> np.index_exp[2::2] + (slice(2, None, 2),) + + >>> np.array([0, 1, 2, 3, 4])[np.s_[2::2]] + array([2, 4]) + + """ + + def __init__(self, maketuple): + self.maketuple = maketuple + + def __getitem__(self, item): + if self.maketuple and not isinstance(item, tuple): + return (item,) + else: + return item + + +index_exp = IndexExpression(maketuple=True) +s_ = IndexExpression(maketuple=False) + +# End contribution from Konrad. + + +# The following functions complement those in twodim_base, but are +# applicable to N-dimensions. + + +def _fill_diagonal_dispatcher(a, val, wrap=None): + return (a,) + + +@array_function_dispatch(_fill_diagonal_dispatcher) +def fill_diagonal(a, val, wrap=False): + """Fill the main diagonal of the given array of any dimensionality. + + For an array `a` with ``a.ndim >= 2``, the diagonal is the list of + values ``a[i, ..., i]`` with indices ``i`` all identical. This function + modifies the input array in-place without returning a value. + + Parameters + ---------- + a : array, at least 2-D. + Array whose diagonal is to be filled in-place. + val : scalar or array_like + Value(s) to write on the diagonal. If `val` is scalar, the value is + written along the diagonal. If array-like, the flattened `val` is + written along the diagonal, repeating if necessary to fill all + diagonal entries. + + wrap : bool + For tall matrices in NumPy version up to 1.6.2, the + diagonal "wrapped" after N columns. You can have this behavior + with this option. This affects only tall matrices. + + See also + -------- + diag_indices, diag_indices_from + + Notes + ----- + .. versionadded:: 1.4.0 + + This functionality can be obtained via `diag_indices`, but internally + this version uses a much faster implementation that never constructs the + indices and uses simple slicing. + + Examples + -------- + >>> a = np.zeros((3, 3), int) + >>> np.fill_diagonal(a, 5) + >>> a + array([[5, 0, 0], + [0, 5, 0], + [0, 0, 5]]) + + The same function can operate on a 4-D array: + + >>> a = np.zeros((3, 3, 3, 3), int) + >>> np.fill_diagonal(a, 4) + + We only show a few blocks for clarity: + + >>> a[0, 0] + array([[4, 0, 0], + [0, 0, 0], + [0, 0, 0]]) + >>> a[1, 1] + array([[0, 0, 0], + [0, 4, 0], + [0, 0, 0]]) + >>> a[2, 2] + array([[0, 0, 0], + [0, 0, 0], + [0, 0, 4]]) + + The wrap option affects only tall matrices: + + >>> # tall matrices no wrap + >>> a = np.zeros((5, 3), int) + >>> np.fill_diagonal(a, 4) + >>> a + array([[4, 0, 0], + [0, 4, 0], + [0, 0, 4], + [0, 0, 0], + [0, 0, 0]]) + + >>> # tall matrices wrap + >>> a = np.zeros((5, 3), int) + >>> np.fill_diagonal(a, 4, wrap=True) + >>> a + array([[4, 0, 0], + [0, 4, 0], + [0, 0, 4], + [0, 0, 0], + [4, 0, 0]]) + + >>> # wide matrices + >>> a = np.zeros((3, 5), int) + >>> np.fill_diagonal(a, 4, wrap=True) + >>> a + array([[4, 0, 0, 0, 0], + [0, 4, 0, 0, 0], + [0, 0, 4, 0, 0]]) + + The anti-diagonal can be filled by reversing the order of elements + using either `numpy.flipud` or `numpy.fliplr`. + + >>> a = np.zeros((3, 3), int); + >>> np.fill_diagonal(np.fliplr(a), [1,2,3]) # Horizontal flip + >>> a + array([[0, 0, 1], + [0, 2, 0], + [3, 0, 0]]) + >>> np.fill_diagonal(np.flipud(a), [1,2,3]) # Vertical flip + >>> a + array([[0, 0, 3], + [0, 2, 0], + [1, 0, 0]]) + + Note that the order in which the diagonal is filled varies depending + on the flip function. + """ + if a.ndim < 2: + raise ValueError("array must be at least 2-d") + end = None + if a.ndim == 2: + # Explicit, fast formula for the common case. For 2-d arrays, we + # accept rectangular ones. + step = a.shape[1] + 1 + # This is needed to don't have tall matrix have the diagonal wrap. + if not wrap: + end = a.shape[1] * a.shape[1] + else: + # For more than d=2, the strided formula is only valid for arrays with + # all dimensions equal, so we check first. + if not np.all(diff(a.shape) == 0): + raise ValueError("All dimensions of input must be of equal length") + step = 1 + (np.cumprod(a.shape[:-1])).sum() + + # Write the value out into the diagonal. + a.flat[:end:step] = val + + +@set_module('numpy') +def diag_indices(n, ndim=2): + """ + Return the indices to access the main diagonal of an array. + + This returns a tuple of indices that can be used to access the main + diagonal of an array `a` with ``a.ndim >= 2`` dimensions and shape + (n, n, ..., n). For ``a.ndim = 2`` this is the usual diagonal, for + ``a.ndim > 2`` this is the set of indices to access ``a[i, i, ..., i]`` + for ``i = [0..n-1]``. + + Parameters + ---------- + n : int + The size, along each dimension, of the arrays for which the returned + indices can be used. + + ndim : int, optional + The number of dimensions. + + See Also + -------- + diag_indices_from + + Notes + ----- + .. versionadded:: 1.4.0 + + Examples + -------- + Create a set of indices to access the diagonal of a (4, 4) array: + + >>> di = np.diag_indices(4) + >>> di + (array([0, 1, 2, 3]), array([0, 1, 2, 3])) + >>> a = np.arange(16).reshape(4, 4) + >>> a + array([[ 0, 1, 2, 3], + [ 4, 5, 6, 7], + [ 8, 9, 10, 11], + [12, 13, 14, 15]]) + >>> a[di] = 100 + >>> a + array([[100, 1, 2, 3], + [ 4, 100, 6, 7], + [ 8, 9, 100, 11], + [ 12, 13, 14, 100]]) + + Now, we create indices to manipulate a 3-D array: + + >>> d3 = np.diag_indices(2, 3) + >>> d3 + (array([0, 1]), array([0, 1]), array([0, 1])) + + And use it to set the diagonal of an array of zeros to 1: + + >>> a = np.zeros((2, 2, 2), dtype=int) + >>> a[d3] = 1 + >>> a + array([[[1, 0], + [0, 0]], + [[0, 0], + [0, 1]]]) + + """ + idx = np.arange(n) + return (idx,) * ndim + + +def _diag_indices_from(arr): + return (arr,) + + +@array_function_dispatch(_diag_indices_from) +def diag_indices_from(arr): + """ + Return the indices to access the main diagonal of an n-dimensional array. + + See `diag_indices` for full details. + + Parameters + ---------- + arr : array, at least 2-D + + See Also + -------- + diag_indices + + Notes + ----- + .. versionadded:: 1.4.0 + + Examples + -------- + + Create a 4 by 4 array. + + >>> a = np.arange(16).reshape(4, 4) + >>> a + array([[ 0, 1, 2, 3], + [ 4, 5, 6, 7], + [ 8, 9, 10, 11], + [12, 13, 14, 15]]) + + Get the indices of the diagonal elements. + + >>> di = np.diag_indices_from(a) + >>> di + (array([0, 1, 2, 3]), array([0, 1, 2, 3])) + + >>> a[di] + array([ 0, 5, 10, 15]) + + This is simply syntactic sugar for diag_indices. + + >>> np.diag_indices(a.shape[0]) + (array([0, 1, 2, 3]), array([0, 1, 2, 3])) + + """ + + if not arr.ndim >= 2: + raise ValueError("input array must be at least 2-d") + # For more than d=2, the strided formula is only valid for arrays with + # all dimensions equal, so we check first. + if not np.all(diff(arr.shape) == 0): + raise ValueError("All dimensions of input must be of equal length") + + return diag_indices(arr.shape[0], arr.ndim) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_index_tricks_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_index_tricks_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..f13ab4d96e488e8a0394125e10a1befb018c9ccf --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_index_tricks_impl.pyi @@ -0,0 +1,154 @@ +from collections.abc import Sequence +from typing import ( + Any, + TypeVar, + Generic, + overload, + Literal, + SupportsIndex, +) + +import numpy as np +from numpy import ( + # Circumvent a naming conflict with `AxisConcatenator.matrix` + matrix as _Matrix, + ndenumerate as ndenumerate, + ndindex as ndindex, + ndarray, + dtype, + str_, + bytes_, + int_, + float64, + complex128, +) +from numpy._typing import ( + # Arrays + ArrayLike, + _NestedSequence, + _FiniteNestedSequence, + NDArray, + + # DTypes + DTypeLike, + _SupportsDType, +) + +from numpy._core.multiarray import ( + unravel_index as unravel_index, + ravel_multi_index as ravel_multi_index, +) + +_T = TypeVar("_T") +_DType = TypeVar("_DType", bound=dtype[Any]) +_BoolType = TypeVar("_BoolType", Literal[True], Literal[False]) +_TupType = TypeVar("_TupType", bound=tuple[Any, ...]) +_ArrayType = TypeVar("_ArrayType", bound=NDArray[Any]) + +__all__: list[str] + +@overload +def ix_(*args: _FiniteNestedSequence[_SupportsDType[_DType]]) -> tuple[ndarray[Any, _DType], ...]: ... +@overload +def ix_(*args: str | _NestedSequence[str]) -> tuple[NDArray[str_], ...]: ... +@overload +def ix_(*args: bytes | _NestedSequence[bytes]) -> tuple[NDArray[bytes_], ...]: ... +@overload +def ix_(*args: bool | _NestedSequence[bool]) -> tuple[NDArray[np.bool], ...]: ... +@overload +def ix_(*args: int | _NestedSequence[int]) -> tuple[NDArray[int_], ...]: ... +@overload +def ix_(*args: float | _NestedSequence[float]) -> tuple[NDArray[float64], ...]: ... +@overload +def ix_(*args: complex | _NestedSequence[complex]) -> tuple[NDArray[complex128], ...]: ... + +class nd_grid(Generic[_BoolType]): + sparse: _BoolType + def __init__(self, sparse: _BoolType = ...) -> None: ... + @overload + def __getitem__( + self: nd_grid[Literal[False]], + key: slice | Sequence[slice], + ) -> NDArray[Any]: ... + @overload + def __getitem__( + self: nd_grid[Literal[True]], + key: slice | Sequence[slice], + ) -> tuple[NDArray[Any], ...]: ... + +class MGridClass(nd_grid[Literal[False]]): + def __init__(self) -> None: ... + +mgrid: MGridClass + +class OGridClass(nd_grid[Literal[True]]): + def __init__(self) -> None: ... + +ogrid: OGridClass + +class AxisConcatenator: + axis: int + matrix: bool + ndmin: int + trans1d: int + def __init__( + self, + axis: int = ..., + matrix: bool = ..., + ndmin: int = ..., + trans1d: int = ..., + ) -> None: ... + @staticmethod + @overload + def concatenate( # type: ignore[misc] + *a: ArrayLike, axis: SupportsIndex = ..., out: None = ... + ) -> NDArray[Any]: ... + @staticmethod + @overload + def concatenate( + *a: ArrayLike, axis: SupportsIndex = ..., out: _ArrayType = ... + ) -> _ArrayType: ... + @staticmethod + def makemat( + data: ArrayLike, dtype: DTypeLike = ..., copy: bool = ... + ) -> _Matrix[Any, Any]: ... + + # TODO: Sort out this `__getitem__` method + def __getitem__(self, key: Any) -> Any: ... + +class RClass(AxisConcatenator): + axis: Literal[0] + matrix: Literal[False] + ndmin: Literal[1] + trans1d: Literal[-1] + def __init__(self) -> None: ... + +r_: RClass + +class CClass(AxisConcatenator): + axis: Literal[-1] + matrix: Literal[False] + ndmin: Literal[2] + trans1d: Literal[0] + def __init__(self) -> None: ... + +c_: CClass + +class IndexExpression(Generic[_BoolType]): + maketuple: _BoolType + def __init__(self, maketuple: _BoolType) -> None: ... + @overload + def __getitem__(self, item: _TupType) -> _TupType: ... # type: ignore[misc] + @overload + def __getitem__(self: IndexExpression[Literal[True]], item: _T) -> tuple[_T]: ... + @overload + def __getitem__(self: IndexExpression[Literal[False]], item: _T) -> _T: ... + +index_exp: IndexExpression[Literal[True]] +s_: IndexExpression[Literal[False]] + +def fill_diagonal(a: NDArray[Any], val: Any, wrap: bool = ...) -> None: ... +def diag_indices(n: int, ndim: int = ...) -> tuple[NDArray[int_], ...]: ... +def diag_indices_from(arr: ArrayLike) -> tuple[NDArray[int_], ...]: ... + +# NOTE: see `numpy/__init__.pyi` for `ndenumerate` and `ndindex` diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_iotools.py b/venv/lib/python3.12/site-packages/numpy/lib/_iotools.py new file mode 100644 index 0000000000000000000000000000000000000000..a38b0017ee5d0018cc5465452748706f0225a18e --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_iotools.py @@ -0,0 +1,897 @@ +"""A collection of functions designed to help I/O with ascii files. + +""" +__docformat__ = "restructuredtext en" + +import numpy as np +import numpy._core.numeric as nx +from numpy._utils import asbytes, asunicode + + +def _decode_line(line, encoding=None): + """Decode bytes from binary input streams. + + Defaults to decoding from 'latin1'. That differs from the behavior of + np.compat.asunicode that decodes from 'ascii'. + + Parameters + ---------- + line : str or bytes + Line to be decoded. + encoding : str + Encoding used to decode `line`. + + Returns + ------- + decoded_line : str + + """ + if type(line) is bytes: + if encoding is None: + encoding = "latin1" + line = line.decode(encoding) + + return line + + +def _is_string_like(obj): + """ + Check whether obj behaves like a string. + """ + try: + obj + '' + except (TypeError, ValueError): + return False + return True + + +def _is_bytes_like(obj): + """ + Check whether obj behaves like a bytes object. + """ + try: + obj + b'' + except (TypeError, ValueError): + return False + return True + + +def has_nested_fields(ndtype): + """ + Returns whether one or several fields of a dtype are nested. + + Parameters + ---------- + ndtype : dtype + Data-type of a structured array. + + Raises + ------ + AttributeError + If `ndtype` does not have a `names` attribute. + + Examples + -------- + >>> dt = np.dtype([('name', 'S4'), ('x', float), ('y', float)]) + >>> np.lib._iotools.has_nested_fields(dt) + False + + """ + for name in ndtype.names or (): + if ndtype[name].names is not None: + return True + return False + + +def flatten_dtype(ndtype, flatten_base=False): + """ + Unpack a structured data-type by collapsing nested fields and/or fields + with a shape. + + Note that the field names are lost. + + Parameters + ---------- + ndtype : dtype + The datatype to collapse + flatten_base : bool, optional + If True, transform a field with a shape into several fields. Default is + False. + + Examples + -------- + >>> dt = np.dtype([('name', 'S4'), ('x', float), ('y', float), + ... ('block', int, (2, 3))]) + >>> np.lib._iotools.flatten_dtype(dt) + [dtype('S4'), dtype('float64'), dtype('float64'), dtype('int64')] + >>> np.lib._iotools.flatten_dtype(dt, flatten_base=True) + [dtype('S4'), + dtype('float64'), + dtype('float64'), + dtype('int64'), + dtype('int64'), + dtype('int64'), + dtype('int64'), + dtype('int64'), + dtype('int64')] + + """ + names = ndtype.names + if names is None: + if flatten_base: + return [ndtype.base] * int(np.prod(ndtype.shape)) + return [ndtype.base] + else: + types = [] + for field in names: + info = ndtype.fields[field] + flat_dt = flatten_dtype(info[0], flatten_base) + types.extend(flat_dt) + return types + + +class LineSplitter: + """ + Object to split a string at a given delimiter or at given places. + + Parameters + ---------- + delimiter : str, int, or sequence of ints, optional + If a string, character used to delimit consecutive fields. + If an integer or a sequence of integers, width(s) of each field. + comments : str, optional + Character used to mark the beginning of a comment. Default is '#'. + autostrip : bool, optional + Whether to strip each individual field. Default is True. + + """ + + def autostrip(self, method): + """ + Wrapper to strip each member of the output of `method`. + + Parameters + ---------- + method : function + Function that takes a single argument and returns a sequence of + strings. + + Returns + ------- + wrapped : function + The result of wrapping `method`. `wrapped` takes a single input + argument and returns a list of strings that are stripped of + white-space. + + """ + return lambda input: [_.strip() for _ in method(input)] + + def __init__(self, delimiter=None, comments='#', autostrip=True, + encoding=None): + delimiter = _decode_line(delimiter) + comments = _decode_line(comments) + + self.comments = comments + + # Delimiter is a character + if (delimiter is None) or isinstance(delimiter, str): + delimiter = delimiter or None + _handyman = self._delimited_splitter + # Delimiter is a list of field widths + elif hasattr(delimiter, '__iter__'): + _handyman = self._variablewidth_splitter + idx = np.cumsum([0] + list(delimiter)) + delimiter = [slice(i, j) for (i, j) in zip(idx[:-1], idx[1:])] + # Delimiter is a single integer + elif int(delimiter): + (_handyman, delimiter) = ( + self._fixedwidth_splitter, int(delimiter)) + else: + (_handyman, delimiter) = (self._delimited_splitter, None) + self.delimiter = delimiter + if autostrip: + self._handyman = self.autostrip(_handyman) + else: + self._handyman = _handyman + self.encoding = encoding + + def _delimited_splitter(self, line): + """Chop off comments, strip, and split at delimiter. """ + if self.comments is not None: + line = line.split(self.comments)[0] + line = line.strip(" \r\n") + if not line: + return [] + return line.split(self.delimiter) + + def _fixedwidth_splitter(self, line): + if self.comments is not None: + line = line.split(self.comments)[0] + line = line.strip("\r\n") + if not line: + return [] + fixed = self.delimiter + slices = [slice(i, i + fixed) for i in range(0, len(line), fixed)] + return [line[s] for s in slices] + + def _variablewidth_splitter(self, line): + if self.comments is not None: + line = line.split(self.comments)[0] + if not line: + return [] + slices = self.delimiter + return [line[s] for s in slices] + + def __call__(self, line): + return self._handyman(_decode_line(line, self.encoding)) + + +class NameValidator: + """ + Object to validate a list of strings to use as field names. + + The strings are stripped of any non alphanumeric character, and spaces + are replaced by '_'. During instantiation, the user can define a list + of names to exclude, as well as a list of invalid characters. Names in + the exclusion list are appended a '_' character. + + Once an instance has been created, it can be called with a list of + names, and a list of valid names will be created. The `__call__` + method accepts an optional keyword "default" that sets the default name + in case of ambiguity. By default this is 'f', so that names will + default to `f0`, `f1`, etc. + + Parameters + ---------- + excludelist : sequence, optional + A list of names to exclude. This list is appended to the default + list ['return', 'file', 'print']. Excluded names are appended an + underscore: for example, `file` becomes `file_` if supplied. + deletechars : str, optional + A string combining invalid characters that must be deleted from the + names. + case_sensitive : {True, False, 'upper', 'lower'}, optional + * If True, field names are case-sensitive. + * If False or 'upper', field names are converted to upper case. + * If 'lower', field names are converted to lower case. + + The default value is True. + replace_space : '_', optional + Character(s) used in replacement of white spaces. + + Notes + ----- + Calling an instance of `NameValidator` is the same as calling its + method `validate`. + + Examples + -------- + >>> validator = np.lib._iotools.NameValidator() + >>> validator(['file', 'field2', 'with space', 'CaSe']) + ('file_', 'field2', 'with_space', 'CaSe') + + >>> validator = np.lib._iotools.NameValidator(excludelist=['excl'], + ... deletechars='q', + ... case_sensitive=False) + >>> validator(['excl', 'field2', 'no_q', 'with space', 'CaSe']) + ('EXCL', 'FIELD2', 'NO_Q', 'WITH_SPACE', 'CASE') + + """ + + defaultexcludelist = ['return', 'file', 'print'] + defaultdeletechars = set(r"""~!@#$%^&*()-=+~\|]}[{';: /?.>,<""") + + def __init__(self, excludelist=None, deletechars=None, + case_sensitive=None, replace_space='_'): + # Process the exclusion list .. + if excludelist is None: + excludelist = [] + excludelist.extend(self.defaultexcludelist) + self.excludelist = excludelist + # Process the list of characters to delete + if deletechars is None: + delete = self.defaultdeletechars + else: + delete = set(deletechars) + delete.add('"') + self.deletechars = delete + # Process the case option ..... + if (case_sensitive is None) or (case_sensitive is True): + self.case_converter = lambda x: x + elif (case_sensitive is False) or case_sensitive.startswith('u'): + self.case_converter = lambda x: x.upper() + elif case_sensitive.startswith('l'): + self.case_converter = lambda x: x.lower() + else: + msg = 'unrecognized case_sensitive value %s.' % case_sensitive + raise ValueError(msg) + + self.replace_space = replace_space + + def validate(self, names, defaultfmt="f%i", nbfields=None): + """ + Validate a list of strings as field names for a structured array. + + Parameters + ---------- + names : sequence of str + Strings to be validated. + defaultfmt : str, optional + Default format string, used if validating a given string + reduces its length to zero. + nbfields : integer, optional + Final number of validated names, used to expand or shrink the + initial list of names. + + Returns + ------- + validatednames : list of str + The list of validated field names. + + Notes + ----- + A `NameValidator` instance can be called directly, which is the + same as calling `validate`. For examples, see `NameValidator`. + + """ + # Initial checks .............. + if (names is None): + if (nbfields is None): + return None + names = [] + if isinstance(names, str): + names = [names, ] + if nbfields is not None: + nbnames = len(names) + if (nbnames < nbfields): + names = list(names) + [''] * (nbfields - nbnames) + elif (nbnames > nbfields): + names = names[:nbfields] + # Set some shortcuts ........... + deletechars = self.deletechars + excludelist = self.excludelist + case_converter = self.case_converter + replace_space = self.replace_space + # Initializes some variables ... + validatednames = [] + seen = dict() + nbempty = 0 + + for item in names: + item = case_converter(item).strip() + if replace_space: + item = item.replace(' ', replace_space) + item = ''.join([c for c in item if c not in deletechars]) + if item == '': + item = defaultfmt % nbempty + while item in names: + nbempty += 1 + item = defaultfmt % nbempty + nbempty += 1 + elif item in excludelist: + item += '_' + cnt = seen.get(item, 0) + if cnt > 0: + validatednames.append(item + '_%d' % cnt) + else: + validatednames.append(item) + seen[item] = cnt + 1 + return tuple(validatednames) + + def __call__(self, names, defaultfmt="f%i", nbfields=None): + return self.validate(names, defaultfmt=defaultfmt, nbfields=nbfields) + + +def str2bool(value): + """ + Tries to transform a string supposed to represent a boolean to a boolean. + + Parameters + ---------- + value : str + The string that is transformed to a boolean. + + Returns + ------- + boolval : bool + The boolean representation of `value`. + + Raises + ------ + ValueError + If the string is not 'True' or 'False' (case independent) + + Examples + -------- + >>> np.lib._iotools.str2bool('TRUE') + True + >>> np.lib._iotools.str2bool('false') + False + + """ + value = value.upper() + if value == 'TRUE': + return True + elif value == 'FALSE': + return False + else: + raise ValueError("Invalid boolean") + + +class ConverterError(Exception): + """ + Exception raised when an error occurs in a converter for string values. + + """ + pass + + +class ConverterLockError(ConverterError): + """ + Exception raised when an attempt is made to upgrade a locked converter. + + """ + pass + + +class ConversionWarning(UserWarning): + """ + Warning issued when a string converter has a problem. + + Notes + ----- + In `genfromtxt` a `ConversionWarning` is issued if raising exceptions + is explicitly suppressed with the "invalid_raise" keyword. + + """ + pass + + +class StringConverter: + """ + Factory class for function transforming a string into another object + (int, float). + + After initialization, an instance can be called to transform a string + into another object. If the string is recognized as representing a + missing value, a default value is returned. + + Attributes + ---------- + func : function + Function used for the conversion. + default : any + Default value to return when the input corresponds to a missing + value. + type : type + Type of the output. + _status : int + Integer representing the order of the conversion. + _mapper : sequence of tuples + Sequence of tuples (dtype, function, default value) to evaluate in + order. + _locked : bool + Holds `locked` parameter. + + Parameters + ---------- + dtype_or_func : {None, dtype, function}, optional + If a `dtype`, specifies the input data type, used to define a basic + function and a default value for missing data. For example, when + `dtype` is float, the `func` attribute is set to `float` and the + default value to `np.nan`. If a function, this function is used to + convert a string to another object. In this case, it is recommended + to give an associated default value as input. + default : any, optional + Value to return by default, that is, when the string to be + converted is flagged as missing. If not given, `StringConverter` + tries to supply a reasonable default value. + missing_values : {None, sequence of str}, optional + ``None`` or sequence of strings indicating a missing value. If ``None`` + then missing values are indicated by empty entries. The default is + ``None``. + locked : bool, optional + Whether the StringConverter should be locked to prevent automatic + upgrade or not. Default is False. + + """ + _mapper = [(nx.bool, str2bool, False), + (nx.int_, int, -1),] + + # On 32-bit systems, we need to make sure that we explicitly include + # nx.int64 since ns.int_ is nx.int32. + if nx.dtype(nx.int_).itemsize < nx.dtype(nx.int64).itemsize: + _mapper.append((nx.int64, int, -1)) + + _mapper.extend([(nx.float64, float, nx.nan), + (nx.complex128, complex, nx.nan + 0j), + (nx.longdouble, nx.longdouble, nx.nan), + # If a non-default dtype is passed, fall back to generic + # ones (should only be used for the converter) + (nx.integer, int, -1), + (nx.floating, float, nx.nan), + (nx.complexfloating, complex, nx.nan + 0j), + # Last, try with the string types (must be last, because + # `_mapper[-1]` is used as default in some cases) + (nx.str_, asunicode, '???'), + (nx.bytes_, asbytes, '???'), + ]) + + @classmethod + def _getdtype(cls, val): + """Returns the dtype of the input variable.""" + return np.array(val).dtype + + @classmethod + def _getsubdtype(cls, val): + """Returns the type of the dtype of the input variable.""" + return np.array(val).dtype.type + + @classmethod + def _dtypeortype(cls, dtype): + """Returns dtype for datetime64 and type of dtype otherwise.""" + + # This is a bit annoying. We want to return the "general" type in most + # cases (ie. "string" rather than "S10"), but we want to return the + # specific type for datetime64 (ie. "datetime64[us]" rather than + # "datetime64"). + if dtype.type == np.datetime64: + return dtype + return dtype.type + + @classmethod + def upgrade_mapper(cls, func, default=None): + """ + Upgrade the mapper of a StringConverter by adding a new function and + its corresponding default. + + The input function (or sequence of functions) and its associated + default value (if any) is inserted in penultimate position of the + mapper. The corresponding type is estimated from the dtype of the + default value. + + Parameters + ---------- + func : var + Function, or sequence of functions + + Examples + -------- + >>> import dateutil.parser + >>> import datetime + >>> dateparser = dateutil.parser.parse + >>> defaultdate = datetime.date(2000, 1, 1) + >>> StringConverter.upgrade_mapper(dateparser, default=defaultdate) + """ + # Func is a single functions + if hasattr(func, '__call__'): + cls._mapper.insert(-1, (cls._getsubdtype(default), func, default)) + return + elif hasattr(func, '__iter__'): + if isinstance(func[0], (tuple, list)): + for _ in func: + cls._mapper.insert(-1, _) + return + if default is None: + default = [None] * len(func) + else: + default = list(default) + default.append([None] * (len(func) - len(default))) + for fct, dft in zip(func, default): + cls._mapper.insert(-1, (cls._getsubdtype(dft), fct, dft)) + + @classmethod + def _find_map_entry(cls, dtype): + # if a converter for the specific dtype is available use that + for i, (deftype, func, default_def) in enumerate(cls._mapper): + if dtype.type == deftype: + return i, (deftype, func, default_def) + + # otherwise find an inexact match + for i, (deftype, func, default_def) in enumerate(cls._mapper): + if np.issubdtype(dtype.type, deftype): + return i, (deftype, func, default_def) + + raise LookupError + + def __init__(self, dtype_or_func=None, default=None, missing_values=None, + locked=False): + # Defines a lock for upgrade + self._locked = bool(locked) + # No input dtype: minimal initialization + if dtype_or_func is None: + self.func = str2bool + self._status = 0 + self.default = default or False + dtype = np.dtype('bool') + else: + # Is the input a np.dtype ? + try: + self.func = None + dtype = np.dtype(dtype_or_func) + except TypeError: + # dtype_or_func must be a function, then + if not hasattr(dtype_or_func, '__call__'): + errmsg = ("The input argument `dtype` is neither a" + " function nor a dtype (got '%s' instead)") + raise TypeError(errmsg % type(dtype_or_func)) + # Set the function + self.func = dtype_or_func + # If we don't have a default, try to guess it or set it to + # None + if default is None: + try: + default = self.func('0') + except ValueError: + default = None + dtype = self._getdtype(default) + + # find the best match in our mapper + try: + self._status, (_, func, default_def) = self._find_map_entry(dtype) + except LookupError: + # no match + self.default = default + _, func, _ = self._mapper[-1] + self._status = 0 + else: + # use the found default only if we did not already have one + if default is None: + self.default = default_def + else: + self.default = default + + # If the input was a dtype, set the function to the last we saw + if self.func is None: + self.func = func + + # If the status is 1 (int), change the function to + # something more robust. + if self.func == self._mapper[1][1]: + if issubclass(dtype.type, np.uint64): + self.func = np.uint64 + elif issubclass(dtype.type, np.int64): + self.func = np.int64 + else: + self.func = lambda x: int(float(x)) + # Store the list of strings corresponding to missing values. + if missing_values is None: + self.missing_values = {''} + else: + if isinstance(missing_values, str): + missing_values = missing_values.split(",") + self.missing_values = set(list(missing_values) + ['']) + + self._callingfunction = self._strict_call + self.type = self._dtypeortype(dtype) + self._checked = False + self._initial_default = default + + def _loose_call(self, value): + try: + return self.func(value) + except ValueError: + return self.default + + def _strict_call(self, value): + try: + + # We check if we can convert the value using the current function + new_value = self.func(value) + + # In addition to having to check whether func can convert the + # value, we also have to make sure that we don't get overflow + # errors for integers. + if self.func is int: + try: + np.array(value, dtype=self.type) + except OverflowError: + raise ValueError + + # We're still here so we can now return the new value + return new_value + + except ValueError: + if value.strip() in self.missing_values: + if not self._status: + self._checked = False + return self.default + raise ValueError("Cannot convert string '%s'" % value) + + def __call__(self, value): + return self._callingfunction(value) + + def _do_upgrade(self): + # Raise an exception if we locked the converter... + if self._locked: + errmsg = "Converter is locked and cannot be upgraded" + raise ConverterLockError(errmsg) + _statusmax = len(self._mapper) + # Complains if we try to upgrade by the maximum + _status = self._status + if _status == _statusmax: + errmsg = "Could not find a valid conversion function" + raise ConverterError(errmsg) + elif _status < _statusmax - 1: + _status += 1 + self.type, self.func, default = self._mapper[_status] + self._status = _status + if self._initial_default is not None: + self.default = self._initial_default + else: + self.default = default + + def upgrade(self, value): + """ + Find the best converter for a given string, and return the result. + + The supplied string `value` is converted by testing different + converters in order. First the `func` method of the + `StringConverter` instance is tried, if this fails other available + converters are tried. The order in which these other converters + are tried is determined by the `_status` attribute of the instance. + + Parameters + ---------- + value : str + The string to convert. + + Returns + ------- + out : any + The result of converting `value` with the appropriate converter. + + """ + self._checked = True + try: + return self._strict_call(value) + except ValueError: + self._do_upgrade() + return self.upgrade(value) + + def iterupgrade(self, value): + self._checked = True + if not hasattr(value, '__iter__'): + value = (value,) + _strict_call = self._strict_call + try: + for _m in value: + _strict_call(_m) + except ValueError: + self._do_upgrade() + self.iterupgrade(value) + + def update(self, func, default=None, testing_value=None, + missing_values='', locked=False): + """ + Set StringConverter attributes directly. + + Parameters + ---------- + func : function + Conversion function. + default : any, optional + Value to return by default, that is, when the string to be + converted is flagged as missing. If not given, + `StringConverter` tries to supply a reasonable default value. + testing_value : str, optional + A string representing a standard input value of the converter. + This string is used to help defining a reasonable default + value. + missing_values : {sequence of str, None}, optional + Sequence of strings indicating a missing value. If ``None``, then + the existing `missing_values` are cleared. The default is ``''``. + locked : bool, optional + Whether the StringConverter should be locked to prevent + automatic upgrade or not. Default is False. + + Notes + ----- + `update` takes the same parameters as the constructor of + `StringConverter`, except that `func` does not accept a `dtype` + whereas `dtype_or_func` in the constructor does. + + """ + self.func = func + self._locked = locked + + # Don't reset the default to None if we can avoid it + if default is not None: + self.default = default + self.type = self._dtypeortype(self._getdtype(default)) + else: + try: + tester = func(testing_value or '1') + except (TypeError, ValueError): + tester = None + self.type = self._dtypeortype(self._getdtype(tester)) + + # Add the missing values to the existing set or clear it. + if missing_values is None: + # Clear all missing values even though the ctor initializes it to + # set(['']) when the argument is None. + self.missing_values = set() + else: + if not np.iterable(missing_values): + missing_values = [missing_values] + if not all(isinstance(v, str) for v in missing_values): + raise TypeError("missing_values must be strings or unicode") + self.missing_values.update(missing_values) + + +def easy_dtype(ndtype, names=None, defaultfmt="f%i", **validationargs): + """ + Convenience function to create a `np.dtype` object. + + The function processes the input `dtype` and matches it with the given + names. + + Parameters + ---------- + ndtype : var + Definition of the dtype. Can be any string or dictionary recognized + by the `np.dtype` function, or a sequence of types. + names : str or sequence, optional + Sequence of strings to use as field names for a structured dtype. + For convenience, `names` can be a string of a comma-separated list + of names. + defaultfmt : str, optional + Format string used to define missing names, such as ``"f%i"`` + (default) or ``"fields_%02i"``. + validationargs : optional + A series of optional arguments used to initialize a + `NameValidator`. + + Examples + -------- + >>> np.lib._iotools.easy_dtype(float) + dtype('float64') + >>> np.lib._iotools.easy_dtype("i4, f8") + dtype([('f0', '>> np.lib._iotools.easy_dtype("i4, f8", defaultfmt="field_%03i") + dtype([('field_000', '>> np.lib._iotools.easy_dtype((int, float, float), names="a,b,c") + dtype([('a', '>> np.lib._iotools.easy_dtype(float, names="a,b,c") + dtype([('a', '>> a = np.array([[1, 2], [3, np.nan]]) + >>> np.nanmin(a) + 1.0 + >>> np.nanmin(a, axis=0) + array([1., 2.]) + >>> np.nanmin(a, axis=1) + array([1., 3.]) + + When positive infinity and negative infinity are present: + + >>> np.nanmin([1, 2, np.nan, np.inf]) + 1.0 + >>> np.nanmin([1, 2, np.nan, -np.inf]) + -inf + + """ + kwargs = {} + if keepdims is not np._NoValue: + kwargs['keepdims'] = keepdims + if initial is not np._NoValue: + kwargs['initial'] = initial + if where is not np._NoValue: + kwargs['where'] = where + + if type(a) is np.ndarray and a.dtype != np.object_: + # Fast, but not safe for subclasses of ndarray, or object arrays, + # which do not implement isnan (gh-9009), or fmin correctly (gh-8975) + res = np.fmin.reduce(a, axis=axis, out=out, **kwargs) + if np.isnan(res).any(): + warnings.warn("All-NaN slice encountered", RuntimeWarning, + stacklevel=2) + else: + # Slow, but safe for subclasses of ndarray + a, mask = _replace_nan(a, +np.inf) + res = np.amin(a, axis=axis, out=out, **kwargs) + if mask is None: + return res + + # Check for all-NaN axis + kwargs.pop("initial", None) + mask = np.all(mask, axis=axis, **kwargs) + if np.any(mask): + res = _copyto(res, np.nan, mask) + warnings.warn("All-NaN axis encountered", RuntimeWarning, + stacklevel=2) + return res + + +def _nanmax_dispatcher(a, axis=None, out=None, keepdims=None, + initial=None, where=None): + return (a, out) + + +@array_function_dispatch(_nanmax_dispatcher) +def nanmax(a, axis=None, out=None, keepdims=np._NoValue, initial=np._NoValue, + where=np._NoValue): + """ + Return the maximum of an array or maximum along an axis, ignoring any + NaNs. When all-NaN slices are encountered a ``RuntimeWarning`` is + raised and NaN is returned for that slice. + + Parameters + ---------- + a : array_like + Array containing numbers whose maximum is desired. If `a` is not an + array, a conversion is attempted. + axis : {int, tuple of int, None}, optional + Axis or axes along which the maximum is computed. The default is to compute + the maximum of the flattened array. + out : ndarray, optional + Alternate output array in which to place the result. The default + is ``None``; if provided, it must have the same shape as the + expected output, but the type will be cast if necessary. See + :ref:`ufuncs-output-type` for more details. + + .. versionadded:: 1.8.0 + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the original `a`. + + If the value is anything but the default, then + `keepdims` will be passed through to the `max` method + of sub-classes of `ndarray`. If the sub-classes methods + does not implement `keepdims` any exceptions will be raised. + + .. versionadded:: 1.8.0 + initial : scalar, optional + The minimum value of an output element. Must be present to allow + computation on empty slice. See `~numpy.ufunc.reduce` for details. + + .. versionadded:: 1.22.0 + where : array_like of bool, optional + Elements to compare for the maximum. See `~numpy.ufunc.reduce` + for details. + + .. versionadded:: 1.22.0 + + Returns + ------- + nanmax : ndarray + An array with the same shape as `a`, with the specified axis removed. + If `a` is a 0-d array, or if axis is None, an ndarray scalar is + returned. The same dtype as `a` is returned. + + See Also + -------- + nanmin : + The minimum value of an array along a given axis, ignoring any NaNs. + amax : + The maximum value of an array along a given axis, propagating any NaNs. + fmax : + Element-wise maximum of two arrays, ignoring any NaNs. + maximum : + Element-wise maximum of two arrays, propagating any NaNs. + isnan : + Shows which elements are Not a Number (NaN). + isfinite: + Shows which elements are neither NaN nor infinity. + + amin, fmin, minimum + + Notes + ----- + NumPy uses the IEEE Standard for Binary Floating-Point for Arithmetic + (IEEE 754). This means that Not a Number is not equivalent to infinity. + Positive infinity is treated as a very large number and negative + infinity is treated as a very small (i.e. negative) number. + + If the input has a integer type the function is equivalent to np.max. + + Examples + -------- + >>> a = np.array([[1, 2], [3, np.nan]]) + >>> np.nanmax(a) + 3.0 + >>> np.nanmax(a, axis=0) + array([3., 2.]) + >>> np.nanmax(a, axis=1) + array([2., 3.]) + + When positive infinity and negative infinity are present: + + >>> np.nanmax([1, 2, np.nan, -np.inf]) + 2.0 + >>> np.nanmax([1, 2, np.nan, np.inf]) + inf + + """ + kwargs = {} + if keepdims is not np._NoValue: + kwargs['keepdims'] = keepdims + if initial is not np._NoValue: + kwargs['initial'] = initial + if where is not np._NoValue: + kwargs['where'] = where + + if type(a) is np.ndarray and a.dtype != np.object_: + # Fast, but not safe for subclasses of ndarray, or object arrays, + # which do not implement isnan (gh-9009), or fmax correctly (gh-8975) + res = np.fmax.reduce(a, axis=axis, out=out, **kwargs) + if np.isnan(res).any(): + warnings.warn("All-NaN slice encountered", RuntimeWarning, + stacklevel=2) + else: + # Slow, but safe for subclasses of ndarray + a, mask = _replace_nan(a, -np.inf) + res = np.amax(a, axis=axis, out=out, **kwargs) + if mask is None: + return res + + # Check for all-NaN axis + kwargs.pop("initial", None) + mask = np.all(mask, axis=axis, **kwargs) + if np.any(mask): + res = _copyto(res, np.nan, mask) + warnings.warn("All-NaN axis encountered", RuntimeWarning, + stacklevel=2) + return res + + +def _nanargmin_dispatcher(a, axis=None, out=None, *, keepdims=None): + return (a,) + + +@array_function_dispatch(_nanargmin_dispatcher) +def nanargmin(a, axis=None, out=None, *, keepdims=np._NoValue): + """ + Return the indices of the minimum values in the specified axis ignoring + NaNs. For all-NaN slices ``ValueError`` is raised. Warning: the results + cannot be trusted if a slice contains only NaNs and Infs. + + Parameters + ---------- + a : array_like + Input data. + axis : int, optional + Axis along which to operate. By default flattened input is used. + out : array, optional + If provided, the result will be inserted into this array. It should + be of the appropriate shape and dtype. + + .. versionadded:: 1.22.0 + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the array. + + .. versionadded:: 1.22.0 + + Returns + ------- + index_array : ndarray + An array of indices or a single index value. + + See Also + -------- + argmin, nanargmax + + Examples + -------- + >>> a = np.array([[np.nan, 4], [2, 3]]) + >>> np.argmin(a) + 0 + >>> np.nanargmin(a) + 2 + >>> np.nanargmin(a, axis=0) + array([1, 1]) + >>> np.nanargmin(a, axis=1) + array([1, 0]) + + """ + a, mask = _replace_nan(a, np.inf) + if mask is not None and mask.size: + mask = np.all(mask, axis=axis) + if np.any(mask): + raise ValueError("All-NaN slice encountered") + res = np.argmin(a, axis=axis, out=out, keepdims=keepdims) + return res + + +def _nanargmax_dispatcher(a, axis=None, out=None, *, keepdims=None): + return (a,) + + +@array_function_dispatch(_nanargmax_dispatcher) +def nanargmax(a, axis=None, out=None, *, keepdims=np._NoValue): + """ + Return the indices of the maximum values in the specified axis ignoring + NaNs. For all-NaN slices ``ValueError`` is raised. Warning: the + results cannot be trusted if a slice contains only NaNs and -Infs. + + + Parameters + ---------- + a : array_like + Input data. + axis : int, optional + Axis along which to operate. By default flattened input is used. + out : array, optional + If provided, the result will be inserted into this array. It should + be of the appropriate shape and dtype. + + .. versionadded:: 1.22.0 + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the array. + + .. versionadded:: 1.22.0 + + Returns + ------- + index_array : ndarray + An array of indices or a single index value. + + See Also + -------- + argmax, nanargmin + + Examples + -------- + >>> a = np.array([[np.nan, 4], [2, 3]]) + >>> np.argmax(a) + 0 + >>> np.nanargmax(a) + 1 + >>> np.nanargmax(a, axis=0) + array([1, 0]) + >>> np.nanargmax(a, axis=1) + array([1, 1]) + + """ + a, mask = _replace_nan(a, -np.inf) + if mask is not None and mask.size: + mask = np.all(mask, axis=axis) + if np.any(mask): + raise ValueError("All-NaN slice encountered") + res = np.argmax(a, axis=axis, out=out, keepdims=keepdims) + return res + + +def _nansum_dispatcher(a, axis=None, dtype=None, out=None, keepdims=None, + initial=None, where=None): + return (a, out) + + +@array_function_dispatch(_nansum_dispatcher) +def nansum(a, axis=None, dtype=None, out=None, keepdims=np._NoValue, + initial=np._NoValue, where=np._NoValue): + """ + Return the sum of array elements over a given axis treating Not a + Numbers (NaNs) as zero. + + In NumPy versions <= 1.9.0 Nan is returned for slices that are all-NaN or + empty. In later versions zero is returned. + + Parameters + ---------- + a : array_like + Array containing numbers whose sum is desired. If `a` is not an + array, a conversion is attempted. + axis : {int, tuple of int, None}, optional + Axis or axes along which the sum is computed. The default is to compute the + sum of the flattened array. + dtype : data-type, optional + The type of the returned array and of the accumulator in which the + elements are summed. By default, the dtype of `a` is used. An + exception is when `a` has an integer type with less precision than + the platform (u)intp. In that case, the default will be either + (u)int32 or (u)int64 depending on whether the platform is 32 or 64 + bits. For inexact inputs, dtype must be inexact. + + .. versionadded:: 1.8.0 + out : ndarray, optional + Alternate output array in which to place the result. The default + is ``None``. If provided, it must have the same shape as the + expected output, but the type will be cast if necessary. See + :ref:`ufuncs-output-type` for more details. The casting of NaN to integer + can yield unexpected results. + + .. versionadded:: 1.8.0 + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the original `a`. + + + If the value is anything but the default, then + `keepdims` will be passed through to the `mean` or `sum` methods + of sub-classes of `ndarray`. If the sub-classes methods + does not implement `keepdims` any exceptions will be raised. + + .. versionadded:: 1.8.0 + initial : scalar, optional + Starting value for the sum. See `~numpy.ufunc.reduce` for details. + + .. versionadded:: 1.22.0 + where : array_like of bool, optional + Elements to include in the sum. See `~numpy.ufunc.reduce` for details. + + .. versionadded:: 1.22.0 + + Returns + ------- + nansum : ndarray. + A new array holding the result is returned unless `out` is + specified, in which it is returned. The result has the same + size as `a`, and the same shape as `a` if `axis` is not None + or `a` is a 1-d array. + + See Also + -------- + numpy.sum : Sum across array propagating NaNs. + isnan : Show which elements are NaN. + isfinite : Show which elements are not NaN or +/-inf. + + Notes + ----- + If both positive and negative infinity are present, the sum will be Not + A Number (NaN). + + Examples + -------- + >>> np.nansum(1) + 1 + >>> np.nansum([1]) + 1 + >>> np.nansum([1, np.nan]) + 1.0 + >>> a = np.array([[1, 1], [1, np.nan]]) + >>> np.nansum(a) + 3.0 + >>> np.nansum(a, axis=0) + array([2., 1.]) + >>> np.nansum([1, np.nan, np.inf]) + inf + >>> np.nansum([1, np.nan, -np.inf]) + -inf + >>> from numpy.testing import suppress_warnings + >>> with np.errstate(invalid="ignore"): + ... np.nansum([1, np.nan, np.inf, -np.inf]) # both +/- infinity present + np.float64(nan) + + """ + a, mask = _replace_nan(a, 0) + return np.sum(a, axis=axis, dtype=dtype, out=out, keepdims=keepdims, + initial=initial, where=where) + + +def _nanprod_dispatcher(a, axis=None, dtype=None, out=None, keepdims=None, + initial=None, where=None): + return (a, out) + + +@array_function_dispatch(_nanprod_dispatcher) +def nanprod(a, axis=None, dtype=None, out=None, keepdims=np._NoValue, + initial=np._NoValue, where=np._NoValue): + """ + Return the product of array elements over a given axis treating Not a + Numbers (NaNs) as ones. + + One is returned for slices that are all-NaN or empty. + + .. versionadded:: 1.10.0 + + Parameters + ---------- + a : array_like + Array containing numbers whose product is desired. If `a` is not an + array, a conversion is attempted. + axis : {int, tuple of int, None}, optional + Axis or axes along which the product is computed. The default is to compute + the product of the flattened array. + dtype : data-type, optional + The type of the returned array and of the accumulator in which the + elements are summed. By default, the dtype of `a` is used. An + exception is when `a` has an integer type with less precision than + the platform (u)intp. In that case, the default will be either + (u)int32 or (u)int64 depending on whether the platform is 32 or 64 + bits. For inexact inputs, dtype must be inexact. + out : ndarray, optional + Alternate output array in which to place the result. The default + is ``None``. If provided, it must have the same shape as the + expected output, but the type will be cast if necessary. See + :ref:`ufuncs-output-type` for more details. The casting of NaN to integer + can yield unexpected results. + keepdims : bool, optional + If True, the axes which are reduced are left in the result as + dimensions with size one. With this option, the result will + broadcast correctly against the original `arr`. + initial : scalar, optional + The starting value for this product. See `~numpy.ufunc.reduce` + for details. + + .. versionadded:: 1.22.0 + where : array_like of bool, optional + Elements to include in the product. See `~numpy.ufunc.reduce` + for details. + + .. versionadded:: 1.22.0 + + Returns + ------- + nanprod : ndarray + A new array holding the result is returned unless `out` is + specified, in which case it is returned. + + See Also + -------- + numpy.prod : Product across array propagating NaNs. + isnan : Show which elements are NaN. + + Examples + -------- + >>> np.nanprod(1) + 1 + >>> np.nanprod([1]) + 1 + >>> np.nanprod([1, np.nan]) + 1.0 + >>> a = np.array([[1, 2], [3, np.nan]]) + >>> np.nanprod(a) + 6.0 + >>> np.nanprod(a, axis=0) + array([3., 2.]) + + """ + a, mask = _replace_nan(a, 1) + return np.prod(a, axis=axis, dtype=dtype, out=out, keepdims=keepdims, + initial=initial, where=where) + + +def _nancumsum_dispatcher(a, axis=None, dtype=None, out=None): + return (a, out) + + +@array_function_dispatch(_nancumsum_dispatcher) +def nancumsum(a, axis=None, dtype=None, out=None): + """ + Return the cumulative sum of array elements over a given axis treating Not a + Numbers (NaNs) as zero. The cumulative sum does not change when NaNs are + encountered and leading NaNs are replaced by zeros. + + Zeros are returned for slices that are all-NaN or empty. + + .. versionadded:: 1.12.0 + + Parameters + ---------- + a : array_like + Input array. + axis : int, optional + Axis along which the cumulative sum is computed. The default + (None) is to compute the cumsum over the flattened array. + dtype : dtype, optional + Type of the returned array and of the accumulator in which the + elements are summed. If `dtype` is not specified, it defaults + to the dtype of `a`, unless `a` has an integer dtype with a + precision less than that of the default platform integer. In + that case, the default platform integer is used. + out : ndarray, optional + Alternative output array in which to place the result. It must + have the same shape and buffer length as the expected output + but the type will be cast if necessary. See :ref:`ufuncs-output-type` for + more details. + + Returns + ------- + nancumsum : ndarray. + A new array holding the result is returned unless `out` is + specified, in which it is returned. The result has the same + size as `a`, and the same shape as `a` if `axis` is not None + or `a` is a 1-d array. + + See Also + -------- + numpy.cumsum : Cumulative sum across array propagating NaNs. + isnan : Show which elements are NaN. + + Examples + -------- + >>> np.nancumsum(1) + array([1]) + >>> np.nancumsum([1]) + array([1]) + >>> np.nancumsum([1, np.nan]) + array([1., 1.]) + >>> a = np.array([[1, 2], [3, np.nan]]) + >>> np.nancumsum(a) + array([1., 3., 6., 6.]) + >>> np.nancumsum(a, axis=0) + array([[1., 2.], + [4., 2.]]) + >>> np.nancumsum(a, axis=1) + array([[1., 3.], + [3., 3.]]) + + """ + a, mask = _replace_nan(a, 0) + return np.cumsum(a, axis=axis, dtype=dtype, out=out) + + +def _nancumprod_dispatcher(a, axis=None, dtype=None, out=None): + return (a, out) + + +@array_function_dispatch(_nancumprod_dispatcher) +def nancumprod(a, axis=None, dtype=None, out=None): + """ + Return the cumulative product of array elements over a given axis treating Not a + Numbers (NaNs) as one. The cumulative product does not change when NaNs are + encountered and leading NaNs are replaced by ones. + + Ones are returned for slices that are all-NaN or empty. + + .. versionadded:: 1.12.0 + + Parameters + ---------- + a : array_like + Input array. + axis : int, optional + Axis along which the cumulative product is computed. By default + the input is flattened. + dtype : dtype, optional + Type of the returned array, as well as of the accumulator in which + the elements are multiplied. If *dtype* is not specified, it + defaults to the dtype of `a`, unless `a` has an integer dtype with + a precision less than that of the default platform integer. In + that case, the default platform integer is used instead. + out : ndarray, optional + Alternative output array in which to place the result. It must + have the same shape and buffer length as the expected output + but the type of the resulting values will be cast if necessary. + + Returns + ------- + nancumprod : ndarray + A new array holding the result is returned unless `out` is + specified, in which case it is returned. + + See Also + -------- + numpy.cumprod : Cumulative product across array propagating NaNs. + isnan : Show which elements are NaN. + + Examples + -------- + >>> np.nancumprod(1) + array([1]) + >>> np.nancumprod([1]) + array([1]) + >>> np.nancumprod([1, np.nan]) + array([1., 1.]) + >>> a = np.array([[1, 2], [3, np.nan]]) + >>> np.nancumprod(a) + array([1., 2., 6., 6.]) + >>> np.nancumprod(a, axis=0) + array([[1., 2.], + [3., 2.]]) + >>> np.nancumprod(a, axis=1) + array([[1., 2.], + [3., 3.]]) + + """ + a, mask = _replace_nan(a, 1) + return np.cumprod(a, axis=axis, dtype=dtype, out=out) + + +def _nanmean_dispatcher(a, axis=None, dtype=None, out=None, keepdims=None, + *, where=None): + return (a, out) + + +@array_function_dispatch(_nanmean_dispatcher) +def nanmean(a, axis=None, dtype=None, out=None, keepdims=np._NoValue, + *, where=np._NoValue): + """ + Compute the arithmetic mean along the specified axis, ignoring NaNs. + + Returns the average of the array elements. The average is taken over + the flattened array by default, otherwise over the specified axis. + `float64` intermediate and return values are used for integer inputs. + + For all-NaN slices, NaN is returned and a `RuntimeWarning` is raised. + + .. versionadded:: 1.8.0 + + Parameters + ---------- + a : array_like + Array containing numbers whose mean is desired. If `a` is not an + array, a conversion is attempted. + axis : {int, tuple of int, None}, optional + Axis or axes along which the means are computed. The default is to compute + the mean of the flattened array. + dtype : data-type, optional + Type to use in computing the mean. For integer inputs, the default + is `float64`; for inexact inputs, it is the same as the input + dtype. + out : ndarray, optional + Alternate output array in which to place the result. The default + is ``None``; if provided, it must have the same shape as the + expected output, but the type will be cast if necessary. + See :ref:`ufuncs-output-type` for more details. + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the original `a`. + + If the value is anything but the default, then + `keepdims` will be passed through to the `mean` or `sum` methods + of sub-classes of `ndarray`. If the sub-classes methods + does not implement `keepdims` any exceptions will be raised. + where : array_like of bool, optional + Elements to include in the mean. See `~numpy.ufunc.reduce` for details. + + .. versionadded:: 1.22.0 + + Returns + ------- + m : ndarray, see dtype parameter above + If `out=None`, returns a new array containing the mean values, + otherwise a reference to the output array is returned. Nan is + returned for slices that contain only NaNs. + + See Also + -------- + average : Weighted average + mean : Arithmetic mean taken while not ignoring NaNs + var, nanvar + + Notes + ----- + The arithmetic mean is the sum of the non-NaN elements along the axis + divided by the number of non-NaN elements. + + Note that for floating-point input, the mean is computed using the same + precision the input has. Depending on the input data, this can cause + the results to be inaccurate, especially for `float32`. Specifying a + higher-precision accumulator using the `dtype` keyword can alleviate + this issue. + + Examples + -------- + >>> a = np.array([[1, np.nan], [3, 4]]) + >>> np.nanmean(a) + 2.6666666666666665 + >>> np.nanmean(a, axis=0) + array([2., 4.]) + >>> np.nanmean(a, axis=1) + array([1., 3.5]) # may vary + + """ + arr, mask = _replace_nan(a, 0) + if mask is None: + return np.mean(arr, axis=axis, dtype=dtype, out=out, keepdims=keepdims, + where=where) + + if dtype is not None: + dtype = np.dtype(dtype) + if dtype is not None and not issubclass(dtype.type, np.inexact): + raise TypeError("If a is inexact, then dtype must be inexact") + if out is not None and not issubclass(out.dtype.type, np.inexact): + raise TypeError("If a is inexact, then out must be inexact") + + cnt = np.sum(~mask, axis=axis, dtype=np.intp, keepdims=keepdims, + where=where) + tot = np.sum(arr, axis=axis, dtype=dtype, out=out, keepdims=keepdims, + where=where) + avg = _divide_by_count(tot, cnt, out=out) + + isbad = (cnt == 0) + if isbad.any(): + warnings.warn("Mean of empty slice", RuntimeWarning, stacklevel=2) + # NaN is the only possible bad value, so no further + # action is needed to handle bad results. + return avg + + +def _nanmedian1d(arr1d, overwrite_input=False): + """ + Private function for rank 1 arrays. Compute the median ignoring NaNs. + See nanmedian for parameter usage + """ + arr1d_parsed, _, overwrite_input = _remove_nan_1d( + arr1d, overwrite_input=overwrite_input, + ) + + if arr1d_parsed.size == 0: + # Ensure that a nan-esque scalar of the appropriate type (and unit) + # is returned for `timedelta64` and `complexfloating` + return arr1d[-1] + + return np.median(arr1d_parsed, overwrite_input=overwrite_input) + + +def _nanmedian(a, axis=None, out=None, overwrite_input=False): + """ + Private function that doesn't support extended axis or keepdims. + These methods are extended to this function using _ureduce + See nanmedian for parameter usage + + """ + if axis is None or a.ndim == 1: + part = a.ravel() + if out is None: + return _nanmedian1d(part, overwrite_input) + else: + out[...] = _nanmedian1d(part, overwrite_input) + return out + else: + # for small medians use sort + indexing which is still faster than + # apply_along_axis + # benchmarked with shuffled (50, 50, x) containing a few NaN + if a.shape[axis] < 600: + return _nanmedian_small(a, axis, out, overwrite_input) + result = np.apply_along_axis(_nanmedian1d, axis, a, overwrite_input) + if out is not None: + out[...] = result + return result + + +def _nanmedian_small(a, axis=None, out=None, overwrite_input=False): + """ + sort + indexing median, faster for small medians along multiple + dimensions due to the high overhead of apply_along_axis + + see nanmedian for parameter usage + """ + a = np.ma.masked_array(a, np.isnan(a)) + m = np.ma.median(a, axis=axis, overwrite_input=overwrite_input) + for i in range(np.count_nonzero(m.mask.ravel())): + warnings.warn("All-NaN slice encountered", RuntimeWarning, + stacklevel=5) + + fill_value = np.timedelta64("NaT") if m.dtype.kind == "m" else np.nan + if out is not None: + out[...] = m.filled(fill_value) + return out + return m.filled(fill_value) + + +def _nanmedian_dispatcher( + a, axis=None, out=None, overwrite_input=None, keepdims=None): + return (a, out) + + +@array_function_dispatch(_nanmedian_dispatcher) +def nanmedian(a, axis=None, out=None, overwrite_input=False, keepdims=np._NoValue): + """ + Compute the median along the specified axis, while ignoring NaNs. + + Returns the median of the array elements. + + .. versionadded:: 1.9.0 + + Parameters + ---------- + a : array_like + Input array or object that can be converted to an array. + axis : {int, sequence of int, None}, optional + Axis or axes along which the medians are computed. The default + is to compute the median along a flattened version of the array. + A sequence of axes is supported since version 1.9.0. + out : ndarray, optional + Alternative output array in which to place the result. It must + have the same shape and buffer length as the expected output, + but the type (of the output) will be cast if necessary. + overwrite_input : bool, optional + If True, then allow use of memory of input array `a` for + calculations. The input array will be modified by the call to + `median`. This will save memory when you do not need to preserve + the contents of the input array. Treat the input as undefined, + but it will probably be fully or partially sorted. Default is + False. If `overwrite_input` is ``True`` and `a` is not already an + `ndarray`, an error will be raised. + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the original `a`. + + If this is anything but the default value it will be passed + through (in the special case of an empty array) to the + `mean` function of the underlying array. If the array is + a sub-class and `mean` does not have the kwarg `keepdims` this + will raise a RuntimeError. + + Returns + ------- + median : ndarray + A new array holding the result. If the input contains integers + or floats smaller than ``float64``, then the output data-type is + ``np.float64``. Otherwise, the data-type of the output is the + same as that of the input. If `out` is specified, that array is + returned instead. + + See Also + -------- + mean, median, percentile + + Notes + ----- + Given a vector ``V`` of length ``N``, the median of ``V`` is the + middle value of a sorted copy of ``V``, ``V_sorted`` - i.e., + ``V_sorted[(N-1)/2]``, when ``N`` is odd and the average of the two + middle values of ``V_sorted`` when ``N`` is even. + + Examples + -------- + >>> a = np.array([[10.0, 7, 4], [3, 2, 1]]) + >>> a[0, 1] = np.nan + >>> a + array([[10., nan, 4.], + [ 3., 2., 1.]]) + >>> np.median(a) + np.float64(nan) + >>> np.nanmedian(a) + 3.0 + >>> np.nanmedian(a, axis=0) + array([6.5, 2. , 2.5]) + >>> np.median(a, axis=1) + array([nan, 2.]) + >>> b = a.copy() + >>> np.nanmedian(b, axis=1, overwrite_input=True) + array([7., 2.]) + >>> assert not np.all(a==b) + >>> b = a.copy() + >>> np.nanmedian(b, axis=None, overwrite_input=True) + 3.0 + >>> assert not np.all(a==b) + + """ + a = np.asanyarray(a) + # apply_along_axis in _nanmedian doesn't handle empty arrays well, + # so deal them upfront + if a.size == 0: + return np.nanmean(a, axis, out=out, keepdims=keepdims) + + return fnb._ureduce(a, func=_nanmedian, keepdims=keepdims, + axis=axis, out=out, + overwrite_input=overwrite_input) + + +def _nanpercentile_dispatcher( + a, q, axis=None, out=None, overwrite_input=None, + method=None, keepdims=None, *, weights=None, interpolation=None): + return (a, q, out, weights) + + +@array_function_dispatch(_nanpercentile_dispatcher) +def nanpercentile( + a, + q, + axis=None, + out=None, + overwrite_input=False, + method="linear", + keepdims=np._NoValue, + *, + weights=None, + interpolation=None, +): + """ + Compute the qth percentile of the data along the specified axis, + while ignoring nan values. + + Returns the qth percentile(s) of the array elements. + + .. versionadded:: 1.9.0 + + Parameters + ---------- + a : array_like + Input array or object that can be converted to an array, containing + nan values to be ignored. + q : array_like of float + Percentile or sequence of percentiles to compute, which must be + between 0 and 100 inclusive. + axis : {int, tuple of int, None}, optional + Axis or axes along which the percentiles are computed. The default + is to compute the percentile(s) along a flattened version of the + array. + out : ndarray, optional + Alternative output array in which to place the result. It must have + the same shape and buffer length as the expected output, but the + type (of the output) will be cast if necessary. + overwrite_input : bool, optional + If True, then allow the input array `a` to be modified by + intermediate calculations, to save memory. In this case, the + contents of the input `a` after this function completes is + undefined. + method : str, optional + This parameter specifies the method to use for estimating the + percentile. There are many different methods, some unique to NumPy. + See the notes for explanation. The options sorted by their R type + as summarized in the H&F paper [1]_ are: + + 1. 'inverted_cdf' + 2. 'averaged_inverted_cdf' + 3. 'closest_observation' + 4. 'interpolated_inverted_cdf' + 5. 'hazen' + 6. 'weibull' + 7. 'linear' (default) + 8. 'median_unbiased' + 9. 'normal_unbiased' + + The first three methods are discontinuous. NumPy further defines the + following discontinuous variations of the default 'linear' (7.) option: + + * 'lower' + * 'higher', + * 'midpoint' + * 'nearest' + + .. versionchanged:: 1.22.0 + This argument was previously called "interpolation" and only + offered the "linear" default and last four options. + + keepdims : bool, optional + If this is set to True, the axes which are reduced are left in + the result as dimensions with size one. With this option, the + result will broadcast correctly against the original array `a`. + + If this is anything but the default value it will be passed + through (in the special case of an empty array) to the + `mean` function of the underlying array. If the array is + a sub-class and `mean` does not have the kwarg `keepdims` this + will raise a RuntimeError. + + weights : array_like, optional + An array of weights associated with the values in `a`. Each value in + `a` contributes to the percentile according to its associated weight. + The weights array can either be 1-D (in which case its length must be + the size of `a` along the given axis) or of the same shape as `a`. + If `weights=None`, then all data in `a` are assumed to have a + weight equal to one. + Only `method="inverted_cdf"` supports weights. + + .. versionadded:: 2.0.0 + + interpolation : str, optional + Deprecated name for the method keyword argument. + + .. deprecated:: 1.22.0 + + Returns + ------- + percentile : scalar or ndarray + If `q` is a single percentile and `axis=None`, then the result + is a scalar. If multiple percentiles are given, first axis of + the result corresponds to the percentiles. The other axes are + the axes that remain after the reduction of `a`. If the input + contains integers or floats smaller than ``float64``, the output + data-type is ``float64``. Otherwise, the output data-type is the + same as that of the input. If `out` is specified, that array is + returned instead. + + See Also + -------- + nanmean + nanmedian : equivalent to ``nanpercentile(..., 50)`` + percentile, median, mean + nanquantile : equivalent to nanpercentile, except q in range [0, 1]. + + Notes + ----- + For more information please see `numpy.percentile` + + Examples + -------- + >>> a = np.array([[10., 7., 4.], [3., 2., 1.]]) + >>> a[0][1] = np.nan + >>> a + array([[10., nan, 4.], + [ 3., 2., 1.]]) + >>> np.percentile(a, 50) + np.float64(nan) + >>> np.nanpercentile(a, 50) + 3.0 + >>> np.nanpercentile(a, 50, axis=0) + array([6.5, 2. , 2.5]) + >>> np.nanpercentile(a, 50, axis=1, keepdims=True) + array([[7.], + [2.]]) + >>> m = np.nanpercentile(a, 50, axis=0) + >>> out = np.zeros_like(m) + >>> np.nanpercentile(a, 50, axis=0, out=out) + array([6.5, 2. , 2.5]) + >>> m + array([6.5, 2. , 2.5]) + + >>> b = a.copy() + >>> np.nanpercentile(b, 50, axis=1, overwrite_input=True) + array([7., 2.]) + >>> assert not np.all(a==b) + + References + ---------- + .. [1] R. J. Hyndman and Y. Fan, + "Sample quantiles in statistical packages," + The American Statistician, 50(4), pp. 361-365, 1996 + + """ + if interpolation is not None: + method = fnb._check_interpolation_as_method( + method, interpolation, "nanpercentile") + + a = np.asanyarray(a) + if a.dtype.kind == "c": + raise TypeError("a must be an array of real numbers") + + q = np.true_divide(q, a.dtype.type(100) if a.dtype.kind == "f" else 100) + # undo any decay that the ufunc performed (see gh-13105) + q = np.asanyarray(q) + if not fnb._quantile_is_valid(q): + raise ValueError("Percentiles must be in the range [0, 100]") + + if weights is not None: + if method != "inverted_cdf": + msg = ("Only method 'inverted_cdf' supports weights. " + f"Got: {method}.") + raise ValueError(msg) + if axis is not None: + axis = _nx.normalize_axis_tuple(axis, a.ndim, argname="axis") + weights = _weights_are_valid(weights=weights, a=a, axis=axis) + if np.any(weights < 0): + raise ValueError("Weights must be non-negative.") + + return _nanquantile_unchecked( + a, q, axis, out, overwrite_input, method, keepdims, weights) + + +def _nanquantile_dispatcher(a, q, axis=None, out=None, overwrite_input=None, + method=None, keepdims=None, *, weights=None, + interpolation=None): + return (a, q, out, weights) + + +@array_function_dispatch(_nanquantile_dispatcher) +def nanquantile( + a, + q, + axis=None, + out=None, + overwrite_input=False, + method="linear", + keepdims=np._NoValue, + *, + weights=None, + interpolation=None, +): + """ + Compute the qth quantile of the data along the specified axis, + while ignoring nan values. + Returns the qth quantile(s) of the array elements. + + .. versionadded:: 1.15.0 + + Parameters + ---------- + a : array_like + Input array or object that can be converted to an array, containing + nan values to be ignored + q : array_like of float + Probability or sequence of probabilities for the quantiles to compute. + Values must be between 0 and 1 inclusive. + axis : {int, tuple of int, None}, optional + Axis or axes along which the quantiles are computed. The + default is to compute the quantile(s) along a flattened + version of the array. + out : ndarray, optional + Alternative output array in which to place the result. It must + have the same shape and buffer length as the expected output, + but the type (of the output) will be cast if necessary. + overwrite_input : bool, optional + If True, then allow the input array `a` to be modified by intermediate + calculations, to save memory. In this case, the contents of the input + `a` after this function completes is undefined. + method : str, optional + This parameter specifies the method to use for estimating the + quantile. There are many different methods, some unique to NumPy. + See the notes for explanation. The options sorted by their R type + as summarized in the H&F paper [1]_ are: + + 1. 'inverted_cdf' + 2. 'averaged_inverted_cdf' + 3. 'closest_observation' + 4. 'interpolated_inverted_cdf' + 5. 'hazen' + 6. 'weibull' + 7. 'linear' (default) + 8. 'median_unbiased' + 9. 'normal_unbiased' + + The first three methods are discontinuous. NumPy further defines the + following discontinuous variations of the default 'linear' (7.) option: + + * 'lower' + * 'higher', + * 'midpoint' + * 'nearest' + + .. versionchanged:: 1.22.0 + This argument was previously called "interpolation" and only + offered the "linear" default and last four options. + + keepdims : bool, optional + If this is set to True, the axes which are reduced are left in + the result as dimensions with size one. With this option, the + result will broadcast correctly against the original array `a`. + + If this is anything but the default value it will be passed + through (in the special case of an empty array) to the + `mean` function of the underlying array. If the array is + a sub-class and `mean` does not have the kwarg `keepdims` this + will raise a RuntimeError. + + weights : array_like, optional + An array of weights associated with the values in `a`. Each value in + `a` contributes to the quantile according to its associated weight. + The weights array can either be 1-D (in which case its length must be + the size of `a` along the given axis) or of the same shape as `a`. + If `weights=None`, then all data in `a` are assumed to have a + weight equal to one. + Only `method="inverted_cdf"` supports weights. + + .. versionadded:: 2.0.0 + + interpolation : str, optional + Deprecated name for the method keyword argument. + + .. deprecated:: 1.22.0 + + Returns + ------- + quantile : scalar or ndarray + If `q` is a single probability and `axis=None`, then the result + is a scalar. If multiple probability levels are given, first axis of + the result corresponds to the quantiles. The other axes are + the axes that remain after the reduction of `a`. If the input + contains integers or floats smaller than ``float64``, the output + data-type is ``float64``. Otherwise, the output data-type is the + same as that of the input. If `out` is specified, that array is + returned instead. + + See Also + -------- + quantile + nanmean, nanmedian + nanmedian : equivalent to ``nanquantile(..., 0.5)`` + nanpercentile : same as nanquantile, but with q in the range [0, 100]. + + Notes + ----- + For more information please see `numpy.quantile` + + Examples + -------- + >>> a = np.array([[10., 7., 4.], [3., 2., 1.]]) + >>> a[0][1] = np.nan + >>> a + array([[10., nan, 4.], + [ 3., 2., 1.]]) + >>> np.quantile(a, 0.5) + np.float64(nan) + >>> np.nanquantile(a, 0.5) + 3.0 + >>> np.nanquantile(a, 0.5, axis=0) + array([6.5, 2. , 2.5]) + >>> np.nanquantile(a, 0.5, axis=1, keepdims=True) + array([[7.], + [2.]]) + >>> m = np.nanquantile(a, 0.5, axis=0) + >>> out = np.zeros_like(m) + >>> np.nanquantile(a, 0.5, axis=0, out=out) + array([6.5, 2. , 2.5]) + >>> m + array([6.5, 2. , 2.5]) + >>> b = a.copy() + >>> np.nanquantile(b, 0.5, axis=1, overwrite_input=True) + array([7., 2.]) + >>> assert not np.all(a==b) + + References + ---------- + .. [1] R. J. Hyndman and Y. Fan, + "Sample quantiles in statistical packages," + The American Statistician, 50(4), pp. 361-365, 1996 + + """ + + if interpolation is not None: + method = fnb._check_interpolation_as_method( + method, interpolation, "nanquantile") + + a = np.asanyarray(a) + if a.dtype.kind == "c": + raise TypeError("a must be an array of real numbers") + + # Use dtype of array if possible (e.g., if q is a python int or float). + if isinstance(q, (int, float)) and a.dtype.kind == "f": + q = np.asanyarray(q, dtype=a.dtype) + else: + q = np.asanyarray(q) + + if not fnb._quantile_is_valid(q): + raise ValueError("Quantiles must be in the range [0, 1]") + + if weights is not None: + if method != "inverted_cdf": + msg = ("Only method 'inverted_cdf' supports weights. " + f"Got: {method}.") + raise ValueError(msg) + if axis is not None: + axis = _nx.normalize_axis_tuple(axis, a.ndim, argname="axis") + weights = _weights_are_valid(weights=weights, a=a, axis=axis) + if np.any(weights < 0): + raise ValueError("Weights must be non-negative.") + + return _nanquantile_unchecked( + a, q, axis, out, overwrite_input, method, keepdims, weights) + + +def _nanquantile_unchecked( + a, + q, + axis=None, + out=None, + overwrite_input=False, + method="linear", + keepdims=np._NoValue, + weights=None, +): + """Assumes that q is in [0, 1], and is an ndarray""" + # apply_along_axis in _nanpercentile doesn't handle empty arrays well, + # so deal them upfront + if a.size == 0: + return np.nanmean(a, axis, out=out, keepdims=keepdims) + return fnb._ureduce(a, + func=_nanquantile_ureduce_func, + q=q, + weights=weights, + keepdims=keepdims, + axis=axis, + out=out, + overwrite_input=overwrite_input, + method=method) + + +def _nanquantile_ureduce_func( + a: np.array, + q: np.array, + weights: np.array, + axis: int = None, + out=None, + overwrite_input: bool = False, + method="linear", +): + """ + Private function that doesn't support extended axis or keepdims. + These methods are extended to this function using _ureduce + See nanpercentile for parameter usage + """ + if axis is None or a.ndim == 1: + part = a.ravel() + wgt = None if weights is None else weights.ravel() + result = _nanquantile_1d(part, q, overwrite_input, method, weights=wgt) + else: + # Note that this code could try to fill in `out` right away + if weights is None: + result = np.apply_along_axis(_nanquantile_1d, axis, a, q, + overwrite_input, method, weights) + # apply_along_axis fills in collapsed axis with results. + # Move those axes to the beginning to match percentile's + # convention. + if q.ndim != 0: + from_ax = [axis + i for i in range(q.ndim)] + result = np.moveaxis(result, from_ax, list(range(q.ndim))) + else: + # We need to apply along axis over 2 arrays, a and weights. + # move operation axes to end for simplicity: + a = np.moveaxis(a, axis, -1) + if weights is not None: + weights = np.moveaxis(weights, axis, -1) + if out is not None: + result = out + else: + # weights are limited to `inverted_cdf` so the result dtype + # is known to be identical to that of `a` here: + result = np.empty_like(a, shape=q.shape + a.shape[:-1]) + + for ii in np.ndindex(a.shape[:-1]): + result[(...,) + ii] = _nanquantile_1d( + a[ii], q, weights=weights[ii], + overwrite_input=overwrite_input, method=method, + ) + # This path dealt with `out` already... + return result + + if out is not None: + out[...] = result + return result + + +def _nanquantile_1d( + arr1d, q, overwrite_input=False, method="linear", weights=None, +): + """ + Private function for rank 1 arrays. Compute quantile ignoring NaNs. + See nanpercentile for parameter usage + """ + # TODO: What to do when arr1d = [1, np.nan] and weights = [0, 1]? + arr1d, weights, overwrite_input = _remove_nan_1d(arr1d, + second_arr1d=weights, overwrite_input=overwrite_input) + if arr1d.size == 0: + # convert to scalar + return np.full(q.shape, np.nan, dtype=arr1d.dtype)[()] + + return fnb._quantile_unchecked( + arr1d, + q, + overwrite_input=overwrite_input, + method=method, + weights=weights, + ) + + +def _nanvar_dispatcher(a, axis=None, dtype=None, out=None, ddof=None, + keepdims=None, *, where=None, mean=None, + correction=None): + return (a, out) + + +@array_function_dispatch(_nanvar_dispatcher) +def nanvar(a, axis=None, dtype=None, out=None, ddof=0, keepdims=np._NoValue, + *, where=np._NoValue, mean=np._NoValue, correction=np._NoValue): + """ + Compute the variance along the specified axis, while ignoring NaNs. + + Returns the variance of the array elements, a measure of the spread of + a distribution. The variance is computed for the flattened array by + default, otherwise over the specified axis. + + For all-NaN slices or slices with zero degrees of freedom, NaN is + returned and a `RuntimeWarning` is raised. + + .. versionadded:: 1.8.0 + + Parameters + ---------- + a : array_like + Array containing numbers whose variance is desired. If `a` is not an + array, a conversion is attempted. + axis : {int, tuple of int, None}, optional + Axis or axes along which the variance is computed. The default is to compute + the variance of the flattened array. + dtype : data-type, optional + Type to use in computing the variance. For arrays of integer type + the default is `float64`; for arrays of float types it is the same as + the array type. + out : ndarray, optional + Alternate output array in which to place the result. It must have + the same shape as the expected output, but the type is cast if + necessary. + ddof : {int, float}, optional + "Delta Degrees of Freedom": the divisor used in the calculation is + ``N - ddof``, where ``N`` represents the number of non-NaN + elements. By default `ddof` is zero. + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the original `a`. + where : array_like of bool, optional + Elements to include in the variance. See `~numpy.ufunc.reduce` for + details. + + .. versionadded:: 1.22.0 + + mean : array_like, optional + Provide the mean to prevent its recalculation. The mean should have + a shape as if it was calculated with ``keepdims=True``. + The axis for the calculation of the mean should be the same as used in + the call to this var function. + + .. versionadded:: 1.26.0 + + correction : {int, float}, optional + Array API compatible name for the ``ddof`` parameter. Only one of them + can be provided at the same time. + + .. versionadded:: 2.0.0 + + Returns + ------- + variance : ndarray, see dtype parameter above + If `out` is None, return a new array containing the variance, + otherwise return a reference to the output array. If ddof is >= the + number of non-NaN elements in a slice or the slice contains only + NaNs, then the result for that slice is NaN. + + See Also + -------- + std : Standard deviation + mean : Average + var : Variance while not ignoring NaNs + nanstd, nanmean + :ref:`ufuncs-output-type` + + Notes + ----- + The variance is the average of the squared deviations from the mean, + i.e., ``var = mean(abs(x - x.mean())**2)``. + + The mean is normally calculated as ``x.sum() / N``, where ``N = len(x)``. + If, however, `ddof` is specified, the divisor ``N - ddof`` is used + instead. In standard statistical practice, ``ddof=1`` provides an + unbiased estimator of the variance of a hypothetical infinite + population. ``ddof=0`` provides a maximum likelihood estimate of the + variance for normally distributed variables. + + Note that for complex numbers, the absolute value is taken before + squaring, so that the result is always real and nonnegative. + + For floating-point input, the variance is computed using the same + precision the input has. Depending on the input data, this can cause + the results to be inaccurate, especially for `float32` (see example + below). Specifying a higher-accuracy accumulator using the ``dtype`` + keyword can alleviate this issue. + + For this function to work on sub-classes of ndarray, they must define + `sum` with the kwarg `keepdims` + + Examples + -------- + >>> a = np.array([[1, np.nan], [3, 4]]) + >>> np.nanvar(a) + 1.5555555555555554 + >>> np.nanvar(a, axis=0) + array([1., 0.]) + >>> np.nanvar(a, axis=1) + array([0., 0.25]) # may vary + + """ + arr, mask = _replace_nan(a, 0) + if mask is None: + return np.var(arr, axis=axis, dtype=dtype, out=out, ddof=ddof, + keepdims=keepdims, where=where, mean=mean, + correction=correction) + + if dtype is not None: + dtype = np.dtype(dtype) + if dtype is not None and not issubclass(dtype.type, np.inexact): + raise TypeError("If a is inexact, then dtype must be inexact") + if out is not None and not issubclass(out.dtype.type, np.inexact): + raise TypeError("If a is inexact, then out must be inexact") + + if correction != np._NoValue: + if ddof != 0: + raise ValueError( + "ddof and correction can't be provided simultaneously." + ) + else: + ddof = correction + + # Compute mean + if type(arr) is np.matrix: + _keepdims = np._NoValue + else: + _keepdims = True + + cnt = np.sum(~mask, axis=axis, dtype=np.intp, keepdims=_keepdims, + where=where) + + if mean is not np._NoValue: + avg = mean + else: + # we need to special case matrix for reverse compatibility + # in order for this to work, these sums need to be called with + # keepdims=True, however matrix now raises an error in this case, but + # the reason that it drops the keepdims kwarg is to force keepdims=True + # so this used to work by serendipity. + avg = np.sum(arr, axis=axis, dtype=dtype, + keepdims=_keepdims, where=where) + avg = _divide_by_count(avg, cnt) + + # Compute squared deviation from mean. + np.subtract(arr, avg, out=arr, casting='unsafe', where=where) + arr = _copyto(arr, 0, mask) + if issubclass(arr.dtype.type, np.complexfloating): + sqr = np.multiply(arr, arr.conj(), out=arr, where=where).real + else: + sqr = np.multiply(arr, arr, out=arr, where=where) + + # Compute variance. + var = np.sum(sqr, axis=axis, dtype=dtype, out=out, keepdims=keepdims, + where=where) + + # Precaution against reduced object arrays + try: + var_ndim = var.ndim + except AttributeError: + var_ndim = np.ndim(var) + if var_ndim < cnt.ndim: + # Subclasses of ndarray may ignore keepdims, so check here. + cnt = cnt.squeeze(axis) + dof = cnt - ddof + var = _divide_by_count(var, dof) + + isbad = (dof <= 0) + if np.any(isbad): + warnings.warn("Degrees of freedom <= 0 for slice.", RuntimeWarning, + stacklevel=2) + # NaN, inf, or negative numbers are all possible bad + # values, so explicitly replace them with NaN. + var = _copyto(var, np.nan, isbad) + return var + + +def _nanstd_dispatcher(a, axis=None, dtype=None, out=None, ddof=None, + keepdims=None, *, where=None, mean=None, + correction=None): + return (a, out) + + +@array_function_dispatch(_nanstd_dispatcher) +def nanstd(a, axis=None, dtype=None, out=None, ddof=0, keepdims=np._NoValue, + *, where=np._NoValue, mean=np._NoValue, correction=np._NoValue): + """ + Compute the standard deviation along the specified axis, while + ignoring NaNs. + + Returns the standard deviation, a measure of the spread of a + distribution, of the non-NaN array elements. The standard deviation is + computed for the flattened array by default, otherwise over the + specified axis. + + For all-NaN slices or slices with zero degrees of freedom, NaN is + returned and a `RuntimeWarning` is raised. + + .. versionadded:: 1.8.0 + + Parameters + ---------- + a : array_like + Calculate the standard deviation of the non-NaN values. + axis : {int, tuple of int, None}, optional + Axis or axes along which the standard deviation is computed. The default is + to compute the standard deviation of the flattened array. + dtype : dtype, optional + Type to use in computing the standard deviation. For arrays of + integer type the default is float64, for arrays of float types it + is the same as the array type. + out : ndarray, optional + Alternative output array in which to place the result. It must have + the same shape as the expected output but the type (of the + calculated values) will be cast if necessary. + ddof : {int, float}, optional + Means Delta Degrees of Freedom. The divisor used in calculations + is ``N - ddof``, where ``N`` represents the number of non-NaN + elements. By default `ddof` is zero. + + keepdims : bool, optional + If this is set to True, the axes which are reduced are left + in the result as dimensions with size one. With this option, + the result will broadcast correctly against the original `a`. + + If this value is anything but the default it is passed through + as-is to the relevant functions of the sub-classes. If these + functions do not have a `keepdims` kwarg, a RuntimeError will + be raised. + where : array_like of bool, optional + Elements to include in the standard deviation. + See `~numpy.ufunc.reduce` for details. + + .. versionadded:: 1.22.0 + + mean : array_like, optional + Provide the mean to prevent its recalculation. The mean should have + a shape as if it was calculated with ``keepdims=True``. + The axis for the calculation of the mean should be the same as used in + the call to this std function. + + .. versionadded:: 1.26.0 + + correction : {int, float}, optional + Array API compatible name for the ``ddof`` parameter. Only one of them + can be provided at the same time. + + .. versionadded:: 2.0.0 + + Returns + ------- + standard_deviation : ndarray, see dtype parameter above. + If `out` is None, return a new array containing the standard + deviation, otherwise return a reference to the output array. If + ddof is >= the number of non-NaN elements in a slice or the slice + contains only NaNs, then the result for that slice is NaN. + + See Also + -------- + var, mean, std + nanvar, nanmean + :ref:`ufuncs-output-type` + + Notes + ----- + The standard deviation is the square root of the average of the squared + deviations from the mean: ``std = sqrt(mean(abs(x - x.mean())**2))``. + + The average squared deviation is normally calculated as + ``x.sum() / N``, where ``N = len(x)``. If, however, `ddof` is + specified, the divisor ``N - ddof`` is used instead. In standard + statistical practice, ``ddof=1`` provides an unbiased estimator of the + variance of the infinite population. ``ddof=0`` provides a maximum + likelihood estimate of the variance for normally distributed variables. + The standard deviation computed in this function is the square root of + the estimated variance, so even with ``ddof=1``, it will not be an + unbiased estimate of the standard deviation per se. + + Note that, for complex numbers, `std` takes the absolute value before + squaring, so that the result is always real and nonnegative. + + For floating-point input, the *std* is computed using the same + precision the input has. Depending on the input data, this can cause + the results to be inaccurate, especially for float32 (see example + below). Specifying a higher-accuracy accumulator using the `dtype` + keyword can alleviate this issue. + + Examples + -------- + >>> a = np.array([[1, np.nan], [3, 4]]) + >>> np.nanstd(a) + 1.247219128924647 + >>> np.nanstd(a, axis=0) + array([1., 0.]) + >>> np.nanstd(a, axis=1) + array([0., 0.5]) # may vary + + """ + var = nanvar(a, axis=axis, dtype=dtype, out=out, ddof=ddof, + keepdims=keepdims, where=where, mean=mean, + correction=correction) + if isinstance(var, np.ndarray): + std = np.sqrt(var, out=var) + elif hasattr(var, 'dtype'): + std = var.dtype.type(np.sqrt(var)) + else: + std = np.sqrt(var) + return std diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_nanfunctions_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_nanfunctions_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..d81f883f76c37db972bbd45e930c364b8df6b31a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_nanfunctions_impl.pyi @@ -0,0 +1,38 @@ +from numpy._core.fromnumeric import ( + amin, + amax, + argmin, + argmax, + sum, + prod, + cumsum, + cumprod, + mean, + var, + std +) + +from numpy.lib._function_base_impl import ( + median, + percentile, + quantile, +) + +__all__: list[str] + +# NOTE: In reaility these functions are not aliases but distinct functions +# with identical signatures. +nanmin = amin +nanmax = amax +nanargmin = argmin +nanargmax = argmax +nansum = sum +nanprod = prod +nancumsum = cumsum +nancumprod = cumprod +nanmean = mean +nanvar = var +nanstd = std +nanmedian = median +nanpercentile = percentile +nanquantile = quantile diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_npyio_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_npyio_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..9b298be08e9e665c95d9137966f4d77e94ed3abf --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_npyio_impl.py @@ -0,0 +1,2594 @@ +""" +IO related functions. +""" +import os +import re +import functools +import itertools +import warnings +import weakref +import contextlib +import operator +from operator import itemgetter, index as opindex, methodcaller +from collections.abc import Mapping +import pickle + +import numpy as np +from . import format +from ._datasource import DataSource +from numpy._core import overrides +from numpy._core.multiarray import packbits, unpackbits +from numpy._core._multiarray_umath import _load_from_filelike +from numpy._core.overrides import set_array_function_like_doc, set_module +from ._iotools import ( + LineSplitter, NameValidator, StringConverter, ConverterError, + ConverterLockError, ConversionWarning, _is_string_like, + has_nested_fields, flatten_dtype, easy_dtype, _decode_line + ) +from numpy._utils import asunicode, asbytes + + +__all__ = [ + 'savetxt', 'loadtxt', 'genfromtxt', 'load', 'save', 'savez', + 'savez_compressed', 'packbits', 'unpackbits', 'fromregex' + ] + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +class BagObj: + """ + BagObj(obj) + + Convert attribute look-ups to getitems on the object passed in. + + Parameters + ---------- + obj : class instance + Object on which attribute look-up is performed. + + Examples + -------- + >>> from numpy.lib._npyio_impl import BagObj as BO + >>> class BagDemo: + ... def __getitem__(self, key): # An instance of BagObj(BagDemo) + ... # will call this method when any + ... # attribute look-up is required + ... result = "Doesn't matter what you want, " + ... return result + "you're gonna get this" + ... + >>> demo_obj = BagDemo() + >>> bagobj = BO(demo_obj) + >>> bagobj.hello_there + "Doesn't matter what you want, you're gonna get this" + >>> bagobj.I_can_be_anything + "Doesn't matter what you want, you're gonna get this" + + """ + + def __init__(self, obj): + # Use weakref to make NpzFile objects collectable by refcount + self._obj = weakref.proxy(obj) + + def __getattribute__(self, key): + try: + return object.__getattribute__(self, '_obj')[key] + except KeyError: + raise AttributeError(key) from None + + def __dir__(self): + """ + Enables dir(bagobj) to list the files in an NpzFile. + + This also enables tab-completion in an interpreter or IPython. + """ + return list(object.__getattribute__(self, '_obj').keys()) + + +def zipfile_factory(file, *args, **kwargs): + """ + Create a ZipFile. + + Allows for Zip64, and the `file` argument can accept file, str, or + pathlib.Path objects. `args` and `kwargs` are passed to the zipfile.ZipFile + constructor. + """ + if not hasattr(file, 'read'): + file = os.fspath(file) + import zipfile + kwargs['allowZip64'] = True + return zipfile.ZipFile(file, *args, **kwargs) + + +@set_module('numpy.lib.npyio') +class NpzFile(Mapping): + """ + NpzFile(fid) + + A dictionary-like object with lazy-loading of files in the zipped + archive provided on construction. + + `NpzFile` is used to load files in the NumPy ``.npz`` data archive + format. It assumes that files in the archive have a ``.npy`` extension, + other files are ignored. + + The arrays and file strings are lazily loaded on either + getitem access using ``obj['key']`` or attribute lookup using + ``obj.f.key``. A list of all files (without ``.npy`` extensions) can + be obtained with ``obj.files`` and the ZipFile object itself using + ``obj.zip``. + + Attributes + ---------- + files : list of str + List of all files in the archive with a ``.npy`` extension. + zip : ZipFile instance + The ZipFile object initialized with the zipped archive. + f : BagObj instance + An object on which attribute can be performed as an alternative + to getitem access on the `NpzFile` instance itself. + allow_pickle : bool, optional + Allow loading pickled data. Default: False + + .. versionchanged:: 1.16.3 + Made default False in response to CVE-2019-6446. + + pickle_kwargs : dict, optional + Additional keyword arguments to pass on to pickle.load. + These are only useful when loading object arrays saved on + Python 2 when using Python 3. + max_header_size : int, optional + Maximum allowed size of the header. Large headers may not be safe + to load securely and thus require explicitly passing a larger value. + See :py:func:`ast.literal_eval()` for details. + This option is ignored when `allow_pickle` is passed. In that case + the file is by definition trusted and the limit is unnecessary. + + Parameters + ---------- + fid : file, str, or pathlib.Path + The zipped archive to open. This is either a file-like object + or a string containing the path to the archive. + own_fid : bool, optional + Whether NpzFile should close the file handle. + Requires that `fid` is a file-like object. + + Examples + -------- + >>> from tempfile import TemporaryFile + >>> outfile = TemporaryFile() + >>> x = np.arange(10) + >>> y = np.sin(x) + >>> np.savez(outfile, x=x, y=y) + >>> _ = outfile.seek(0) + + >>> npz = np.load(outfile) + >>> isinstance(npz, np.lib.npyio.NpzFile) + True + >>> npz + NpzFile 'object' with keys: x, y + >>> sorted(npz.files) + ['x', 'y'] + >>> npz['x'] # getitem access + array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]) + >>> npz.f.x # attribute lookup + array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]) + + """ + # Make __exit__ safe if zipfile_factory raises an exception + zip = None + fid = None + _MAX_REPR_ARRAY_COUNT = 5 + + def __init__(self, fid, own_fid=False, allow_pickle=False, + pickle_kwargs=None, *, + max_header_size=format._MAX_HEADER_SIZE): + # Import is postponed to here since zipfile depends on gzip, an + # optional component of the so-called standard library. + _zip = zipfile_factory(fid) + self._files = _zip.namelist() + self.files = [] + self.allow_pickle = allow_pickle + self.max_header_size = max_header_size + self.pickle_kwargs = pickle_kwargs + for x in self._files: + if x.endswith('.npy'): + self.files.append(x[:-4]) + else: + self.files.append(x) + self.zip = _zip + self.f = BagObj(self) + if own_fid: + self.fid = fid + + def __enter__(self): + return self + + def __exit__(self, exc_type, exc_value, traceback): + self.close() + + def close(self): + """ + Close the file. + + """ + if self.zip is not None: + self.zip.close() + self.zip = None + if self.fid is not None: + self.fid.close() + self.fid = None + self.f = None # break reference cycle + + def __del__(self): + self.close() + + # Implement the Mapping ABC + def __iter__(self): + return iter(self.files) + + def __len__(self): + return len(self.files) + + def __getitem__(self, key): + # FIXME: This seems like it will copy strings around + # more than is strictly necessary. The zipfile + # will read the string and then + # the format.read_array will copy the string + # to another place in memory. + # It would be better if the zipfile could read + # (or at least uncompress) the data + # directly into the array memory. + member = False + if key in self._files: + member = True + elif key in self.files: + member = True + key += '.npy' + if member: + bytes = self.zip.open(key) + magic = bytes.read(len(format.MAGIC_PREFIX)) + bytes.close() + if magic == format.MAGIC_PREFIX: + bytes = self.zip.open(key) + return format.read_array(bytes, + allow_pickle=self.allow_pickle, + pickle_kwargs=self.pickle_kwargs, + max_header_size=self.max_header_size) + else: + return self.zip.read(key) + else: + raise KeyError(f"{key} is not a file in the archive") + + def __contains__(self, key): + return (key in self._files or key in self.files) + + def __repr__(self): + # Get filename or default to `object` + if isinstance(self.fid, str): + filename = self.fid + else: + filename = getattr(self.fid, "name", "object") + + # Get the name of arrays + array_names = ', '.join(self.files[:self._MAX_REPR_ARRAY_COUNT]) + if len(self.files) > self._MAX_REPR_ARRAY_COUNT: + array_names += "..." + return f"NpzFile {filename!r} with keys: {array_names}" + + # Work around problems with the docstrings in the Mapping methods + # They contain a `->`, which confuses the type annotation interpretations + # of sphinx-docs. See gh-25964 + + def get(self, key, default=None, /): + """ + D.get(k,[,d]) returns D[k] if k in D, else d. d defaults to None. + """ + return Mapping.get(self, key, default) + + def items(self): + """ + D.items() returns a set-like object providing a view on the items + """ + return Mapping.items(self) + + def keys(self): + """ + D.keys() returns a set-like object providing a view on the keys + """ + return Mapping.keys(self) + + def values(self): + """ + D.values() returns a set-like object providing a view on the values + """ + return Mapping.values(self) + + +@set_module('numpy') +def load(file, mmap_mode=None, allow_pickle=False, fix_imports=True, + encoding='ASCII', *, max_header_size=format._MAX_HEADER_SIZE): + """ + Load arrays or pickled objects from ``.npy``, ``.npz`` or pickled files. + + .. warning:: Loading files that contain object arrays uses the ``pickle`` + module, which is not secure against erroneous or maliciously + constructed data. Consider passing ``allow_pickle=False`` to + load data that is known not to contain object arrays for the + safer handling of untrusted sources. + + Parameters + ---------- + file : file-like object, string, or pathlib.Path + The file to read. File-like objects must support the + ``seek()`` and ``read()`` methods and must always + be opened in binary mode. Pickled files require that the + file-like object support the ``readline()`` method as well. + mmap_mode : {None, 'r+', 'r', 'w+', 'c'}, optional + If not None, then memory-map the file, using the given mode (see + `numpy.memmap` for a detailed description of the modes). A + memory-mapped array is kept on disk. However, it can be accessed + and sliced like any ndarray. Memory mapping is especially useful + for accessing small fragments of large files without reading the + entire file into memory. + allow_pickle : bool, optional + Allow loading pickled object arrays stored in npy files. Reasons for + disallowing pickles include security, as loading pickled data can + execute arbitrary code. If pickles are disallowed, loading object + arrays will fail. Default: False + + .. versionchanged:: 1.16.3 + Made default False in response to CVE-2019-6446. + + fix_imports : bool, optional + Only useful when loading Python 2 generated pickled files on Python 3, + which includes npy/npz files containing object arrays. If `fix_imports` + is True, pickle will try to map the old Python 2 names to the new names + used in Python 3. + encoding : str, optional + What encoding to use when reading Python 2 strings. Only useful when + loading Python 2 generated pickled files in Python 3, which includes + npy/npz files containing object arrays. Values other than 'latin1', + 'ASCII', and 'bytes' are not allowed, as they can corrupt numerical + data. Default: 'ASCII' + max_header_size : int, optional + Maximum allowed size of the header. Large headers may not be safe + to load securely and thus require explicitly passing a larger value. + See :py:func:`ast.literal_eval()` for details. + This option is ignored when `allow_pickle` is passed. In that case + the file is by definition trusted and the limit is unnecessary. + + Returns + ------- + result : array, tuple, dict, etc. + Data stored in the file. For ``.npz`` files, the returned instance + of NpzFile class must be closed to avoid leaking file descriptors. + + Raises + ------ + OSError + If the input file does not exist or cannot be read. + UnpicklingError + If ``allow_pickle=True``, but the file cannot be loaded as a pickle. + ValueError + The file contains an object array, but ``allow_pickle=False`` given. + EOFError + When calling ``np.load`` multiple times on the same file handle, + if all data has already been read + + See Also + -------- + save, savez, savez_compressed, loadtxt + memmap : Create a memory-map to an array stored in a file on disk. + lib.format.open_memmap : Create or load a memory-mapped ``.npy`` file. + + Notes + ----- + - If the file contains pickle data, then whatever object is stored + in the pickle is returned. + - If the file is a ``.npy`` file, then a single array is returned. + - If the file is a ``.npz`` file, then a dictionary-like object is + returned, containing ``{filename: array}`` key-value pairs, one for + each file in the archive. + - If the file is a ``.npz`` file, the returned value supports the + context manager protocol in a similar fashion to the open function:: + + with load('foo.npz') as data: + a = data['a'] + + The underlying file descriptor is closed when exiting the 'with' + block. + + Examples + -------- + Store data to disk, and load it again: + + >>> np.save('/tmp/123', np.array([[1, 2, 3], [4, 5, 6]])) + >>> np.load('/tmp/123.npy') + array([[1, 2, 3], + [4, 5, 6]]) + + Store compressed data to disk, and load it again: + + >>> a=np.array([[1, 2, 3], [4, 5, 6]]) + >>> b=np.array([1, 2]) + >>> np.savez('/tmp/123.npz', a=a, b=b) + >>> data = np.load('/tmp/123.npz') + >>> data['a'] + array([[1, 2, 3], + [4, 5, 6]]) + >>> data['b'] + array([1, 2]) + >>> data.close() + + Mem-map the stored array, and then access the second row + directly from disk: + + >>> X = np.load('/tmp/123.npy', mmap_mode='r') + >>> X[1, :] + memmap([4, 5, 6]) + + """ + if encoding not in ('ASCII', 'latin1', 'bytes'): + # The 'encoding' value for pickle also affects what encoding + # the serialized binary data of NumPy arrays is loaded + # in. Pickle does not pass on the encoding information to + # NumPy. The unpickling code in numpy._core.multiarray is + # written to assume that unicode data appearing where binary + # should be is in 'latin1'. 'bytes' is also safe, as is 'ASCII'. + # + # Other encoding values can corrupt binary data, and we + # purposefully disallow them. For the same reason, the errors= + # argument is not exposed, as values other than 'strict' + # result can similarly silently corrupt numerical data. + raise ValueError("encoding must be 'ASCII', 'latin1', or 'bytes'") + + pickle_kwargs = dict(encoding=encoding, fix_imports=fix_imports) + + with contextlib.ExitStack() as stack: + if hasattr(file, 'read'): + fid = file + own_fid = False + else: + fid = stack.enter_context(open(os.fspath(file), "rb")) + own_fid = True + + # Code to distinguish from NumPy binary files and pickles. + _ZIP_PREFIX = b'PK\x03\x04' + _ZIP_SUFFIX = b'PK\x05\x06' # empty zip files start with this + N = len(format.MAGIC_PREFIX) + magic = fid.read(N) + if not magic: + raise EOFError("No data left in file") + # If the file size is less than N, we need to make sure not + # to seek past the beginning of the file + fid.seek(-min(N, len(magic)), 1) # back-up + if magic.startswith(_ZIP_PREFIX) or magic.startswith(_ZIP_SUFFIX): + # zip-file (assume .npz) + # Potentially transfer file ownership to NpzFile + stack.pop_all() + ret = NpzFile(fid, own_fid=own_fid, allow_pickle=allow_pickle, + pickle_kwargs=pickle_kwargs, + max_header_size=max_header_size) + return ret + elif magic == format.MAGIC_PREFIX: + # .npy file + if mmap_mode: + if allow_pickle: + max_header_size = 2**64 + return format.open_memmap(file, mode=mmap_mode, + max_header_size=max_header_size) + else: + return format.read_array(fid, allow_pickle=allow_pickle, + pickle_kwargs=pickle_kwargs, + max_header_size=max_header_size) + else: + # Try a pickle + if not allow_pickle: + raise ValueError("Cannot load file containing pickled data " + "when allow_pickle=False") + try: + return pickle.load(fid, **pickle_kwargs) + except Exception as e: + raise pickle.UnpicklingError( + f"Failed to interpret file {file!r} as a pickle") from e + + +def _save_dispatcher(file, arr, allow_pickle=None, fix_imports=None): + return (arr,) + + +@array_function_dispatch(_save_dispatcher) +def save(file, arr, allow_pickle=True, fix_imports=True): + """ + Save an array to a binary file in NumPy ``.npy`` format. + + Parameters + ---------- + file : file, str, or pathlib.Path + File or filename to which the data is saved. If file is a file-object, + then the filename is unchanged. If file is a string or Path, + a ``.npy`` extension will be appended to the filename if it does not + already have one. + arr : array_like + Array data to be saved. + allow_pickle : bool, optional + Allow saving object arrays using Python pickles. Reasons for + disallowing pickles include security (loading pickled data can execute + arbitrary code) and portability (pickled objects may not be loadable + on different Python installations, for example if the stored objects + require libraries that are not available, and not all pickled data is + compatible between different versions of Python). + Default: True + fix_imports : bool, optional + Only useful in forcing objects in object arrays on Python 3 to be + pickled in a Python 2 compatible way. If `fix_imports` is True, pickle + will try to map the new Python 3 names to the old module names used in + Python 2, so that the pickle data stream is readable with Python 2. + + See Also + -------- + savez : Save several arrays into a ``.npz`` archive + savetxt, load + + Notes + ----- + For a description of the ``.npy`` format, see :py:mod:`numpy.lib.format`. + + Any data saved to the file is appended to the end of the file. + + Examples + -------- + >>> from tempfile import TemporaryFile + >>> outfile = TemporaryFile() + + >>> x = np.arange(10) + >>> np.save(outfile, x) + + >>> _ = outfile.seek(0) # Only needed to simulate closing & reopening file + >>> np.load(outfile) + array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]) + + + >>> with open('test.npy', 'wb') as f: + ... np.save(f, np.array([1, 2])) + ... np.save(f, np.array([1, 3])) + >>> with open('test.npy', 'rb') as f: + ... a = np.load(f) + ... b = np.load(f) + >>> print(a, b) + # [1 2] [1 3] + """ + if hasattr(file, 'write'): + file_ctx = contextlib.nullcontext(file) + else: + file = os.fspath(file) + if not file.endswith('.npy'): + file = file + '.npy' + file_ctx = open(file, "wb") + + with file_ctx as fid: + arr = np.asanyarray(arr) + format.write_array(fid, arr, allow_pickle=allow_pickle, + pickle_kwargs=dict(fix_imports=fix_imports)) + + +def _savez_dispatcher(file, *args, **kwds): + yield from args + yield from kwds.values() + + +@array_function_dispatch(_savez_dispatcher) +def savez(file, *args, **kwds): + """Save several arrays into a single file in uncompressed ``.npz`` format. + + Provide arrays as keyword arguments to store them under the + corresponding name in the output file: ``savez(fn, x=x, y=y)``. + + If arrays are specified as positional arguments, i.e., ``savez(fn, + x, y)``, their names will be `arr_0`, `arr_1`, etc. + + Parameters + ---------- + file : file, str, or pathlib.Path + Either the filename (string) or an open file (file-like object) + where the data will be saved. If file is a string or a Path, the + ``.npz`` extension will be appended to the filename if it is not + already there. + args : Arguments, optional + Arrays to save to the file. Please use keyword arguments (see + `kwds` below) to assign names to arrays. Arrays specified as + args will be named "arr_0", "arr_1", and so on. + kwds : Keyword arguments, optional + Arrays to save to the file. Each array will be saved to the + output file with its corresponding keyword name. + + Returns + ------- + None + + See Also + -------- + save : Save a single array to a binary file in NumPy format. + savetxt : Save an array to a file as plain text. + savez_compressed : Save several arrays into a compressed ``.npz`` archive + + Notes + ----- + The ``.npz`` file format is a zipped archive of files named after the + variables they contain. The archive is not compressed and each file + in the archive contains one variable in ``.npy`` format. For a + description of the ``.npy`` format, see :py:mod:`numpy.lib.format`. + + When opening the saved ``.npz`` file with `load` a `~lib.npyio.NpzFile` + object is returned. This is a dictionary-like object which can be queried + for its list of arrays (with the ``.files`` attribute), and for the arrays + themselves. + + Keys passed in `kwds` are used as filenames inside the ZIP archive. + Therefore, keys should be valid filenames; e.g., avoid keys that begin with + ``/`` or contain ``.``. + + When naming variables with keyword arguments, it is not possible to name a + variable ``file``, as this would cause the ``file`` argument to be defined + twice in the call to ``savez``. + + Examples + -------- + >>> from tempfile import TemporaryFile + >>> outfile = TemporaryFile() + >>> x = np.arange(10) + >>> y = np.sin(x) + + Using `savez` with \\*args, the arrays are saved with default names. + + >>> np.savez(outfile, x, y) + >>> _ = outfile.seek(0) # Only needed to simulate closing & reopening file + >>> npzfile = np.load(outfile) + >>> npzfile.files + ['arr_0', 'arr_1'] + >>> npzfile['arr_0'] + array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]) + + Using `savez` with \\**kwds, the arrays are saved with the keyword names. + + >>> outfile = TemporaryFile() + >>> np.savez(outfile, x=x, y=y) + >>> _ = outfile.seek(0) + >>> npzfile = np.load(outfile) + >>> sorted(npzfile.files) + ['x', 'y'] + >>> npzfile['x'] + array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]) + + """ + _savez(file, args, kwds, False) + + +def _savez_compressed_dispatcher(file, *args, **kwds): + yield from args + yield from kwds.values() + + +@array_function_dispatch(_savez_compressed_dispatcher) +def savez_compressed(file, *args, **kwds): + """ + Save several arrays into a single file in compressed ``.npz`` format. + + Provide arrays as keyword arguments to store them under the + corresponding name in the output file: ``savez_compressed(fn, x=x, y=y)``. + + If arrays are specified as positional arguments, i.e., + ``savez_compressed(fn, x, y)``, their names will be `arr_0`, `arr_1`, etc. + + Parameters + ---------- + file : file, str, or pathlib.Path + Either the filename (string) or an open file (file-like object) + where the data will be saved. If file is a string or a Path, the + ``.npz`` extension will be appended to the filename if it is not + already there. + args : Arguments, optional + Arrays to save to the file. Please use keyword arguments (see + `kwds` below) to assign names to arrays. Arrays specified as + args will be named "arr_0", "arr_1", and so on. + kwds : Keyword arguments, optional + Arrays to save to the file. Each array will be saved to the + output file with its corresponding keyword name. + + Returns + ------- + None + + See Also + -------- + numpy.save : Save a single array to a binary file in NumPy format. + numpy.savetxt : Save an array to a file as plain text. + numpy.savez : Save several arrays into an uncompressed ``.npz`` file format + numpy.load : Load the files created by savez_compressed. + + Notes + ----- + The ``.npz`` file format is a zipped archive of files named after the + variables they contain. The archive is compressed with + ``zipfile.ZIP_DEFLATED`` and each file in the archive contains one variable + in ``.npy`` format. For a description of the ``.npy`` format, see + :py:mod:`numpy.lib.format`. + + + When opening the saved ``.npz`` file with `load` a `~lib.npyio.NpzFile` + object is returned. This is a dictionary-like object which can be queried + for its list of arrays (with the ``.files`` attribute), and for the arrays + themselves. + + Examples + -------- + >>> test_array = np.random.rand(3, 2) + >>> test_vector = np.random.rand(4) + >>> np.savez_compressed('/tmp/123', a=test_array, b=test_vector) + >>> loaded = np.load('/tmp/123.npz') + >>> print(np.array_equal(test_array, loaded['a'])) + True + >>> print(np.array_equal(test_vector, loaded['b'])) + True + + """ + _savez(file, args, kwds, True) + + +def _savez(file, args, kwds, compress, allow_pickle=True, pickle_kwargs=None): + # Import is postponed to here since zipfile depends on gzip, an optional + # component of the so-called standard library. + import zipfile + + if not hasattr(file, 'write'): + file = os.fspath(file) + if not file.endswith('.npz'): + file = file + '.npz' + + namedict = kwds + for i, val in enumerate(args): + key = 'arr_%d' % i + if key in namedict.keys(): + raise ValueError( + "Cannot use un-named variables and keyword %s" % key) + namedict[key] = val + + if compress: + compression = zipfile.ZIP_DEFLATED + else: + compression = zipfile.ZIP_STORED + + zipf = zipfile_factory(file, mode="w", compression=compression) + + for key, val in namedict.items(): + fname = key + '.npy' + val = np.asanyarray(val) + # always force zip64, gh-10776 + with zipf.open(fname, 'w', force_zip64=True) as fid: + format.write_array(fid, val, + allow_pickle=allow_pickle, + pickle_kwargs=pickle_kwargs) + + zipf.close() + + +def _ensure_ndmin_ndarray_check_param(ndmin): + """Just checks if the param ndmin is supported on + _ensure_ndmin_ndarray. It is intended to be used as + verification before running anything expensive. + e.g. loadtxt, genfromtxt + """ + # Check correctness of the values of `ndmin` + if ndmin not in [0, 1, 2]: + raise ValueError(f"Illegal value of ndmin keyword: {ndmin}") + +def _ensure_ndmin_ndarray(a, *, ndmin: int): + """This is a helper function of loadtxt and genfromtxt to ensure + proper minimum dimension as requested + + ndim : int. Supported values 1, 2, 3 + ^^ whenever this changes, keep in sync with + _ensure_ndmin_ndarray_check_param + """ + # Verify that the array has at least dimensions `ndmin`. + # Tweak the size and shape of the arrays - remove extraneous dimensions + if a.ndim > ndmin: + a = np.squeeze(a) + # and ensure we have the minimum number of dimensions asked for + # - has to be in this order for the odd case ndmin=1, a.squeeze().ndim=0 + if a.ndim < ndmin: + if ndmin == 1: + a = np.atleast_1d(a) + elif ndmin == 2: + a = np.atleast_2d(a).T + + return a + + +# amount of lines loadtxt reads in one chunk, can be overridden for testing +_loadtxt_chunksize = 50000 + + +def _check_nonneg_int(value, name="argument"): + try: + operator.index(value) + except TypeError: + raise TypeError(f"{name} must be an integer") from None + if value < 0: + raise ValueError(f"{name} must be nonnegative") + + +def _preprocess_comments(iterable, comments, encoding): + """ + Generator that consumes a line iterated iterable and strips out the + multiple (or multi-character) comments from lines. + This is a pre-processing step to achieve feature parity with loadtxt + (we assume that this feature is a nieche feature). + """ + for line in iterable: + if isinstance(line, bytes): + # Need to handle conversion here, or the splitting would fail + line = line.decode(encoding) + + for c in comments: + line = line.split(c, 1)[0] + + yield line + + +# The number of rows we read in one go if confronted with a parametric dtype +_loadtxt_chunksize = 50000 + + +def _read(fname, *, delimiter=',', comment='#', quote='"', + imaginary_unit='j', usecols=None, skiplines=0, + max_rows=None, converters=None, ndmin=None, unpack=False, + dtype=np.float64, encoding=None): + r""" + Read a NumPy array from a text file. + This is a helper function for loadtxt. + + Parameters + ---------- + fname : file, str, or pathlib.Path + The filename or the file to be read. + delimiter : str, optional + Field delimiter of the fields in line of the file. + Default is a comma, ','. If None any sequence of whitespace is + considered a delimiter. + comment : str or sequence of str or None, optional + Character that begins a comment. All text from the comment + character to the end of the line is ignored. + Multiple comments or multiple-character comment strings are supported, + but may be slower and `quote` must be empty if used. + Use None to disable all use of comments. + quote : str or None, optional + Character that is used to quote string fields. Default is '"' + (a double quote). Use None to disable quote support. + imaginary_unit : str, optional + Character that represent the imaginary unit `sqrt(-1)`. + Default is 'j'. + usecols : array_like, optional + A one-dimensional array of integer column numbers. These are the + columns from the file to be included in the array. If this value + is not given, all the columns are used. + skiplines : int, optional + Number of lines to skip before interpreting the data in the file. + max_rows : int, optional + Maximum number of rows of data to read. Default is to read the + entire file. + converters : dict or callable, optional + A function to parse all columns strings into the desired value, or + a dictionary mapping column number to a parser function. + E.g. if column 0 is a date string: ``converters = {0: datestr2num}``. + Converters can also be used to provide a default value for missing + data, e.g. ``converters = lambda s: float(s.strip() or 0)`` will + convert empty fields to 0. + Default: None + ndmin : int, optional + Minimum dimension of the array returned. + Allowed values are 0, 1 or 2. Default is 0. + unpack : bool, optional + If True, the returned array is transposed, so that arguments may be + unpacked using ``x, y, z = read(...)``. When used with a structured + data-type, arrays are returned for each field. Default is False. + dtype : numpy data type + A NumPy dtype instance, can be a structured dtype to map to the + columns of the file. + encoding : str, optional + Encoding used to decode the inputfile. The special value 'bytes' + (the default) enables backwards-compatible behavior for `converters`, + ensuring that inputs to the converter functions are encoded + bytes objects. The special value 'bytes' has no additional effect if + ``converters=None``. If encoding is ``'bytes'`` or ``None``, the + default system encoding is used. + + Returns + ------- + ndarray + NumPy array. + """ + # Handle special 'bytes' keyword for encoding + byte_converters = False + if encoding == 'bytes': + encoding = None + byte_converters = True + + if dtype is None: + raise TypeError("a dtype must be provided.") + dtype = np.dtype(dtype) + + read_dtype_via_object_chunks = None + if dtype.kind in 'SUM' and ( + dtype == "S0" or dtype == "U0" or dtype == "M8" or dtype == 'm8'): + # This is a legacy "flexible" dtype. We do not truly support + # parametric dtypes currently (no dtype discovery step in the core), + # but have to support these for backward compatibility. + read_dtype_via_object_chunks = dtype + dtype = np.dtype(object) + + if usecols is not None: + # Allow usecols to be a single int or a sequence of ints, the C-code + # handles the rest + try: + usecols = list(usecols) + except TypeError: + usecols = [usecols] + + _ensure_ndmin_ndarray_check_param(ndmin) + + if comment is None: + comments = None + else: + # assume comments are a sequence of strings + if "" in comment: + raise ValueError( + "comments cannot be an empty string. Use comments=None to " + "disable comments." + ) + comments = tuple(comment) + comment = None + if len(comments) == 0: + comments = None # No comments at all + elif len(comments) == 1: + # If there is only one comment, and that comment has one character, + # the normal parsing can deal with it just fine. + if isinstance(comments[0], str) and len(comments[0]) == 1: + comment = comments[0] + comments = None + else: + # Input validation if there are multiple comment characters + if delimiter in comments: + raise TypeError( + f"Comment characters '{comments}' cannot include the " + f"delimiter '{delimiter}'" + ) + + # comment is now either a 1 or 0 character string or a tuple: + if comments is not None: + # Note: An earlier version support two character comments (and could + # have been extended to multiple characters, we assume this is + # rare enough to not optimize for. + if quote is not None: + raise ValueError( + "when multiple comments or a multi-character comment is " + "given, quotes are not supported. In this case quotechar " + "must be set to None.") + + if len(imaginary_unit) != 1: + raise ValueError('len(imaginary_unit) must be 1.') + + _check_nonneg_int(skiplines) + if max_rows is not None: + _check_nonneg_int(max_rows) + else: + # Passing -1 to the C code means "read the entire file". + max_rows = -1 + + fh_closing_ctx = contextlib.nullcontext() + filelike = False + try: + if isinstance(fname, os.PathLike): + fname = os.fspath(fname) + if isinstance(fname, str): + fh = np.lib._datasource.open(fname, 'rt', encoding=encoding) + if encoding is None: + encoding = getattr(fh, 'encoding', 'latin1') + + fh_closing_ctx = contextlib.closing(fh) + data = fh + filelike = True + else: + if encoding is None: + encoding = getattr(fname, 'encoding', 'latin1') + data = iter(fname) + except TypeError as e: + raise ValueError( + f"fname must be a string, filehandle, list of strings,\n" + f"or generator. Got {type(fname)} instead.") from e + + with fh_closing_ctx: + if comments is not None: + if filelike: + data = iter(data) + filelike = False + data = _preprocess_comments(data, comments, encoding) + + if read_dtype_via_object_chunks is None: + arr = _load_from_filelike( + data, delimiter=delimiter, comment=comment, quote=quote, + imaginary_unit=imaginary_unit, + usecols=usecols, skiplines=skiplines, max_rows=max_rows, + converters=converters, dtype=dtype, + encoding=encoding, filelike=filelike, + byte_converters=byte_converters) + + else: + # This branch reads the file into chunks of object arrays and then + # casts them to the desired actual dtype. This ensures correct + # string-length and datetime-unit discovery (like `arr.astype()`). + # Due to chunking, certain error reports are less clear, currently. + if filelike: + data = iter(data) # cannot chunk when reading from file + filelike = False + + c_byte_converters = False + if read_dtype_via_object_chunks == "S": + c_byte_converters = True # Use latin1 rather than ascii + + chunks = [] + while max_rows != 0: + if max_rows < 0: + chunk_size = _loadtxt_chunksize + else: + chunk_size = min(_loadtxt_chunksize, max_rows) + + next_arr = _load_from_filelike( + data, delimiter=delimiter, comment=comment, quote=quote, + imaginary_unit=imaginary_unit, + usecols=usecols, skiplines=skiplines, max_rows=chunk_size, + converters=converters, dtype=dtype, + encoding=encoding, filelike=filelike, + byte_converters=byte_converters, + c_byte_converters=c_byte_converters) + # Cast here already. We hope that this is better even for + # large files because the storage is more compact. It could + # be adapted (in principle the concatenate could cast). + chunks.append(next_arr.astype(read_dtype_via_object_chunks)) + + skiprows = 0 # Only have to skip for first chunk + if max_rows >= 0: + max_rows -= chunk_size + if len(next_arr) < chunk_size: + # There was less data than requested, so we are done. + break + + # Need at least one chunk, but if empty, the last one may have + # the wrong shape. + if len(chunks) > 1 and len(chunks[-1]) == 0: + del chunks[-1] + if len(chunks) == 1: + arr = chunks[0] + else: + arr = np.concatenate(chunks, axis=0) + + # NOTE: ndmin works as advertised for structured dtypes, but normally + # these would return a 1D result plus the structured dimension, + # so ndmin=2 adds a third dimension even when no squeezing occurs. + # A `squeeze=False` could be a better solution (pandas uses squeeze). + arr = _ensure_ndmin_ndarray(arr, ndmin=ndmin) + + if arr.shape: + if arr.shape[0] == 0: + warnings.warn( + f'loadtxt: input contained no data: "{fname}"', + category=UserWarning, + stacklevel=3 + ) + + if unpack: + # Unpack structured dtypes if requested: + dt = arr.dtype + if dt.names is not None: + # For structured arrays, return an array for each field. + return [arr[field] for field in dt.names] + else: + return arr.T + else: + return arr + + +@set_array_function_like_doc +@set_module('numpy') +def loadtxt(fname, dtype=float, comments='#', delimiter=None, + converters=None, skiprows=0, usecols=None, unpack=False, + ndmin=0, encoding=None, max_rows=None, *, quotechar=None, + like=None): + r""" + Load data from a text file. + + Parameters + ---------- + fname : file, str, pathlib.Path, list of str, generator + File, filename, list, or generator to read. If the filename + extension is ``.gz`` or ``.bz2``, the file is first decompressed. Note + that generators must return bytes or strings. The strings + in a list or produced by a generator are treated as lines. + dtype : data-type, optional + Data-type of the resulting array; default: float. If this is a + structured data-type, the resulting array will be 1-dimensional, and + each row will be interpreted as an element of the array. In this + case, the number of columns used must match the number of fields in + the data-type. + comments : str or sequence of str or None, optional + The characters or list of characters used to indicate the start of a + comment. None implies no comments. For backwards compatibility, byte + strings will be decoded as 'latin1'. The default is '#'. + delimiter : str, optional + The character used to separate the values. For backwards compatibility, + byte strings will be decoded as 'latin1'. The default is whitespace. + + .. versionchanged:: 1.23.0 + Only single character delimiters are supported. Newline characters + cannot be used as the delimiter. + + converters : dict or callable, optional + Converter functions to customize value parsing. If `converters` is + callable, the function is applied to all columns, else it must be a + dict that maps column number to a parser function. + See examples for further details. + Default: None. + + .. versionchanged:: 1.23.0 + The ability to pass a single callable to be applied to all columns + was added. + + skiprows : int, optional + Skip the first `skiprows` lines, including comments; default: 0. + usecols : int or sequence, optional + Which columns to read, with 0 being the first. For example, + ``usecols = (1,4,5)`` will extract the 2nd, 5th and 6th columns. + The default, None, results in all columns being read. + + .. versionchanged:: 1.11.0 + When a single column has to be read it is possible to use + an integer instead of a tuple. E.g ``usecols = 3`` reads the + fourth column the same way as ``usecols = (3,)`` would. + unpack : bool, optional + If True, the returned array is transposed, so that arguments may be + unpacked using ``x, y, z = loadtxt(...)``. When used with a + structured data-type, arrays are returned for each field. + Default is False. + ndmin : int, optional + The returned array will have at least `ndmin` dimensions. + Otherwise mono-dimensional axes will be squeezed. + Legal values: 0 (default), 1 or 2. + + .. versionadded:: 1.6.0 + encoding : str, optional + Encoding used to decode the inputfile. Does not apply to input streams. + The special value 'bytes' enables backward compatibility workarounds + that ensures you receive byte arrays as results if possible and passes + 'latin1' encoded strings to converters. Override this value to receive + unicode arrays and pass strings as input to converters. If set to None + the system default is used. The default value is 'bytes'. + + .. versionadded:: 1.14.0 + .. versionchanged:: 2.0 + Before NumPy 2, the default was ``'bytes'`` for Python 2 + compatibility. The default is now ``None``. + + max_rows : int, optional + Read `max_rows` rows of content after `skiprows` lines. The default is + to read all the rows. Note that empty rows containing no data such as + empty lines and comment lines are not counted towards `max_rows`, + while such lines are counted in `skiprows`. + + .. versionadded:: 1.16.0 + + .. versionchanged:: 1.23.0 + Lines containing no data, including comment lines (e.g., lines + starting with '#' or as specified via `comments`) are not counted + towards `max_rows`. + quotechar : unicode character or None, optional + The character used to denote the start and end of a quoted item. + Occurrences of the delimiter or comment characters are ignored within + a quoted item. The default value is ``quotechar=None``, which means + quoting support is disabled. + + If two consecutive instances of `quotechar` are found within a quoted + field, the first is treated as an escape character. See examples. + + .. versionadded:: 1.23.0 + ${ARRAY_FUNCTION_LIKE} + + .. versionadded:: 1.20.0 + + Returns + ------- + out : ndarray + Data read from the text file. + + See Also + -------- + load, fromstring, fromregex + genfromtxt : Load data with missing values handled as specified. + scipy.io.loadmat : reads MATLAB data files + + Notes + ----- + This function aims to be a fast reader for simply formatted files. The + `genfromtxt` function provides more sophisticated handling of, e.g., + lines with missing values. + + Each row in the input text file must have the same number of values to be + able to read all values. If all rows do not have same number of values, a + subset of up to n columns (where n is the least number of values present + in all rows) can be read by specifying the columns via `usecols`. + + .. versionadded:: 1.10.0 + + The strings produced by the Python float.hex method can be used as + input for floats. + + Examples + -------- + >>> from io import StringIO # StringIO behaves like a file object + >>> c = StringIO("0 1\n2 3") + >>> np.loadtxt(c) + array([[0., 1.], + [2., 3.]]) + + >>> d = StringIO("M 21 72\nF 35 58") + >>> np.loadtxt(d, dtype={'names': ('gender', 'age', 'weight'), + ... 'formats': ('S1', 'i4', 'f4')}) + array([(b'M', 21, 72.), (b'F', 35, 58.)], + dtype=[('gender', 'S1'), ('age', '>> c = StringIO("1,0,2\n3,0,4") + >>> x, y = np.loadtxt(c, delimiter=',', usecols=(0, 2), unpack=True) + >>> x + array([1., 3.]) + >>> y + array([2., 4.]) + + The `converters` argument is used to specify functions to preprocess the + text prior to parsing. `converters` can be a dictionary that maps + preprocessing functions to each column: + + >>> s = StringIO("1.618, 2.296\n3.141, 4.669\n") + >>> conv = { + ... 0: lambda x: np.floor(float(x)), # conversion fn for column 0 + ... 1: lambda x: np.ceil(float(x)), # conversion fn for column 1 + ... } + >>> np.loadtxt(s, delimiter=",", converters=conv) + array([[1., 3.], + [3., 5.]]) + + `converters` can be a callable instead of a dictionary, in which case it + is applied to all columns: + + >>> s = StringIO("0xDE 0xAD\n0xC0 0xDE") + >>> import functools + >>> conv = functools.partial(int, base=16) + >>> np.loadtxt(s, converters=conv) + array([[222., 173.], + [192., 222.]]) + + This example shows how `converters` can be used to convert a field + with a trailing minus sign into a negative number. + + >>> s = StringIO("10.01 31.25-\n19.22 64.31\n17.57- 63.94") + >>> def conv(fld): + ... return -float(fld[:-1]) if fld.endswith("-") else float(fld) + ... + >>> np.loadtxt(s, converters=conv) + array([[ 10.01, -31.25], + [ 19.22, 64.31], + [-17.57, 63.94]]) + + Using a callable as the converter can be particularly useful for handling + values with different formatting, e.g. floats with underscores: + + >>> s = StringIO("1 2.7 100_000") + >>> np.loadtxt(s, converters=float) + array([1.e+00, 2.7e+00, 1.e+05]) + + This idea can be extended to automatically handle values specified in + many different formats, such as hex values: + + >>> def conv(val): + ... try: + ... return float(val) + ... except ValueError: + ... return float.fromhex(val) + >>> s = StringIO("1, 2.5, 3_000, 0b4, 0x1.4000000000000p+2") + >>> np.loadtxt(s, delimiter=",", converters=conv) + array([1.0e+00, 2.5e+00, 3.0e+03, 1.8e+02, 5.0e+00]) + + Or a format where the ``-`` sign comes after the number: + + >>> s = StringIO("10.01 31.25-\n19.22 64.31\n17.57- 63.94") + >>> conv = lambda x: -float(x[:-1]) if x.endswith("-") else float(x) + >>> np.loadtxt(s, converters=conv) + array([[ 10.01, -31.25], + [ 19.22, 64.31], + [-17.57, 63.94]]) + + Support for quoted fields is enabled with the `quotechar` parameter. + Comment and delimiter characters are ignored when they appear within a + quoted item delineated by `quotechar`: + + >>> s = StringIO('"alpha, #42", 10.0\n"beta, #64", 2.0\n') + >>> dtype = np.dtype([("label", "U12"), ("value", float)]) + >>> np.loadtxt(s, dtype=dtype, delimiter=",", quotechar='"') + array([('alpha, #42', 10.), ('beta, #64', 2.)], + dtype=[('label', '>> s = StringIO('"alpha, #42" 10.0\n"beta, #64" 2.0\n') + >>> dtype = np.dtype([("label", "U12"), ("value", float)]) + >>> np.loadtxt(s, dtype=dtype, delimiter=None, quotechar='"') + array([('alpha, #42', 10.), ('beta, #64', 2.)], + dtype=[('label', '>> s = StringIO('"Hello, my name is ""Monty""!"') + >>> np.loadtxt(s, dtype="U", delimiter=",", quotechar='"') + array('Hello, my name is "Monty"!', dtype='>> d = StringIO("1 2\n2 4\n3 9 12\n4 16 20") + >>> np.loadtxt(d, usecols=(0, 1)) + array([[ 1., 2.], + [ 2., 4.], + [ 3., 9.], + [ 4., 16.]]) + + """ + + if like is not None: + return _loadtxt_with_like( + like, fname, dtype=dtype, comments=comments, delimiter=delimiter, + converters=converters, skiprows=skiprows, usecols=usecols, + unpack=unpack, ndmin=ndmin, encoding=encoding, + max_rows=max_rows + ) + + if isinstance(delimiter, bytes): + delimiter.decode("latin1") + + if dtype is None: + dtype = np.float64 + + comment = comments + # Control character type conversions for Py3 convenience + if comment is not None: + if isinstance(comment, (str, bytes)): + comment = [comment] + comment = [ + x.decode('latin1') if isinstance(x, bytes) else x for x in comment] + if isinstance(delimiter, bytes): + delimiter = delimiter.decode('latin1') + + arr = _read(fname, dtype=dtype, comment=comment, delimiter=delimiter, + converters=converters, skiplines=skiprows, usecols=usecols, + unpack=unpack, ndmin=ndmin, encoding=encoding, + max_rows=max_rows, quote=quotechar) + + return arr + + +_loadtxt_with_like = array_function_dispatch()(loadtxt) + + +def _savetxt_dispatcher(fname, X, fmt=None, delimiter=None, newline=None, + header=None, footer=None, comments=None, + encoding=None): + return (X,) + + +@array_function_dispatch(_savetxt_dispatcher) +def savetxt(fname, X, fmt='%.18e', delimiter=' ', newline='\n', header='', + footer='', comments='# ', encoding=None): + """ + Save an array to a text file. + + Parameters + ---------- + fname : filename, file handle or pathlib.Path + If the filename ends in ``.gz``, the file is automatically saved in + compressed gzip format. `loadtxt` understands gzipped files + transparently. + X : 1D or 2D array_like + Data to be saved to a text file. + fmt : str or sequence of strs, optional + A single format (%10.5f), a sequence of formats, or a + multi-format string, e.g. 'Iteration %d -- %10.5f', in which + case `delimiter` is ignored. For complex `X`, the legal options + for `fmt` are: + + * a single specifier, ``fmt='%.4e'``, resulting in numbers formatted + like ``' (%s+%sj)' % (fmt, fmt)`` + * a full string specifying every real and imaginary part, e.g. + ``' %.4e %+.4ej %.4e %+.4ej %.4e %+.4ej'`` for 3 columns + * a list of specifiers, one per column - in this case, the real + and imaginary part must have separate specifiers, + e.g. ``['%.3e + %.3ej', '(%.15e%+.15ej)']`` for 2 columns + delimiter : str, optional + String or character separating columns. + newline : str, optional + String or character separating lines. + + .. versionadded:: 1.5.0 + header : str, optional + String that will be written at the beginning of the file. + + .. versionadded:: 1.7.0 + footer : str, optional + String that will be written at the end of the file. + + .. versionadded:: 1.7.0 + comments : str, optional + String that will be prepended to the ``header`` and ``footer`` strings, + to mark them as comments. Default: '# ', as expected by e.g. + ``numpy.loadtxt``. + + .. versionadded:: 1.7.0 + encoding : {None, str}, optional + Encoding used to encode the outputfile. Does not apply to output + streams. If the encoding is something other than 'bytes' or 'latin1' + you will not be able to load the file in NumPy versions < 1.14. Default + is 'latin1'. + + .. versionadded:: 1.14.0 + + + See Also + -------- + save : Save an array to a binary file in NumPy ``.npy`` format + savez : Save several arrays into an uncompressed ``.npz`` archive + savez_compressed : Save several arrays into a compressed ``.npz`` archive + + Notes + ----- + Further explanation of the `fmt` parameter + (``%[flag]width[.precision]specifier``): + + flags: + ``-`` : left justify + + ``+`` : Forces to precede result with + or -. + + ``0`` : Left pad the number with zeros instead of space (see width). + + width: + Minimum number of characters to be printed. The value is not truncated + if it has more characters. + + precision: + - For integer specifiers (eg. ``d,i,o,x``), the minimum number of + digits. + - For ``e, E`` and ``f`` specifiers, the number of digits to print + after the decimal point. + - For ``g`` and ``G``, the maximum number of significant digits. + - For ``s``, the maximum number of characters. + + specifiers: + ``c`` : character + + ``d`` or ``i`` : signed decimal integer + + ``e`` or ``E`` : scientific notation with ``e`` or ``E``. + + ``f`` : decimal floating point + + ``g,G`` : use the shorter of ``e,E`` or ``f`` + + ``o`` : signed octal + + ``s`` : string of characters + + ``u`` : unsigned decimal integer + + ``x,X`` : unsigned hexadecimal integer + + This explanation of ``fmt`` is not complete, for an exhaustive + specification see [1]_. + + References + ---------- + .. [1] `Format Specification Mini-Language + `_, + Python Documentation. + + Examples + -------- + >>> x = y = z = np.arange(0.0,5.0,1.0) + >>> np.savetxt('test.out', x, delimiter=',') # X is an array + >>> np.savetxt('test.out', (x,y,z)) # x,y,z equal sized 1D arrays + >>> np.savetxt('test.out', x, fmt='%1.4e') # use exponential notation + + """ + + class WriteWrap: + """Convert to bytes on bytestream inputs. + + """ + def __init__(self, fh, encoding): + self.fh = fh + self.encoding = encoding + self.do_write = self.first_write + + def close(self): + self.fh.close() + + def write(self, v): + self.do_write(v) + + def write_bytes(self, v): + if isinstance(v, bytes): + self.fh.write(v) + else: + self.fh.write(v.encode(self.encoding)) + + def write_normal(self, v): + self.fh.write(asunicode(v)) + + def first_write(self, v): + try: + self.write_normal(v) + self.write = self.write_normal + except TypeError: + # input is probably a bytestream + self.write_bytes(v) + self.write = self.write_bytes + + own_fh = False + if isinstance(fname, os.PathLike): + fname = os.fspath(fname) + if _is_string_like(fname): + # datasource doesn't support creating a new file ... + open(fname, 'wt').close() + fh = np.lib._datasource.open(fname, 'wt', encoding=encoding) + own_fh = True + elif hasattr(fname, 'write'): + # wrap to handle byte output streams + fh = WriteWrap(fname, encoding or 'latin1') + else: + raise ValueError('fname must be a string or file handle') + + try: + X = np.asarray(X) + + # Handle 1-dimensional arrays + if X.ndim == 0 or X.ndim > 2: + raise ValueError( + "Expected 1D or 2D array, got %dD array instead" % X.ndim) + elif X.ndim == 1: + # Common case -- 1d array of numbers + if X.dtype.names is None: + X = np.atleast_2d(X).T + ncol = 1 + + # Complex dtype -- each field indicates a separate column + else: + ncol = len(X.dtype.names) + else: + ncol = X.shape[1] + + iscomplex_X = np.iscomplexobj(X) + # `fmt` can be a string with multiple insertion points or a + # list of formats. E.g. '%10.5f\t%10d' or ('%10.5f', '$10d') + if type(fmt) in (list, tuple): + if len(fmt) != ncol: + raise AttributeError('fmt has wrong shape. %s' % str(fmt)) + format = delimiter.join(fmt) + elif isinstance(fmt, str): + n_fmt_chars = fmt.count('%') + error = ValueError('fmt has wrong number of %% formats: %s' % fmt) + if n_fmt_chars == 1: + if iscomplex_X: + fmt = [' (%s+%sj)' % (fmt, fmt), ] * ncol + else: + fmt = [fmt, ] * ncol + format = delimiter.join(fmt) + elif iscomplex_X and n_fmt_chars != (2 * ncol): + raise error + elif ((not iscomplex_X) and n_fmt_chars != ncol): + raise error + else: + format = fmt + else: + raise ValueError('invalid fmt: %r' % (fmt,)) + + if len(header) > 0: + header = header.replace('\n', '\n' + comments) + fh.write(comments + header + newline) + if iscomplex_X: + for row in X: + row2 = [] + for number in row: + row2.append(number.real) + row2.append(number.imag) + s = format % tuple(row2) + newline + fh.write(s.replace('+-', '-')) + else: + for row in X: + try: + v = format % tuple(row) + newline + except TypeError as e: + raise TypeError("Mismatch between array dtype ('%s') and " + "format specifier ('%s')" + % (str(X.dtype), format)) from e + fh.write(v) + + if len(footer) > 0: + footer = footer.replace('\n', '\n' + comments) + fh.write(comments + footer + newline) + finally: + if own_fh: + fh.close() + + +@set_module('numpy') +def fromregex(file, regexp, dtype, encoding=None): + r""" + Construct an array from a text file, using regular expression parsing. + + The returned array is always a structured array, and is constructed from + all matches of the regular expression in the file. Groups in the regular + expression are converted to fields of the structured array. + + Parameters + ---------- + file : file, str, or pathlib.Path + Filename or file object to read. + + .. versionchanged:: 1.22.0 + Now accepts `os.PathLike` implementations. + regexp : str or regexp + Regular expression used to parse the file. + Groups in the regular expression correspond to fields in the dtype. + dtype : dtype or list of dtypes + Dtype for the structured array; must be a structured datatype. + encoding : str, optional + Encoding used to decode the inputfile. Does not apply to input streams. + + .. versionadded:: 1.14.0 + + Returns + ------- + output : ndarray + The output array, containing the part of the content of `file` that + was matched by `regexp`. `output` is always a structured array. + + Raises + ------ + TypeError + When `dtype` is not a valid dtype for a structured array. + + See Also + -------- + fromstring, loadtxt + + Notes + ----- + Dtypes for structured arrays can be specified in several forms, but all + forms specify at least the data type and field name. For details see + `basics.rec`. + + Examples + -------- + >>> from io import StringIO + >>> text = StringIO("1312 foo\n1534 bar\n444 qux") + + >>> regexp = r"(\d+)\s+(...)" # match [digits, whitespace, anything] + >>> output = np.fromregex(text, regexp, + ... [('num', np.int64), ('key', 'S3')]) + >>> output + array([(1312, b'foo'), (1534, b'bar'), ( 444, b'qux')], + dtype=[('num', '>> output['num'] + array([1312, 1534, 444]) + + """ + own_fh = False + if not hasattr(file, "read"): + file = os.fspath(file) + file = np.lib._datasource.open(file, 'rt', encoding=encoding) + own_fh = True + + try: + if not isinstance(dtype, np.dtype): + dtype = np.dtype(dtype) + if dtype.names is None: + raise TypeError('dtype must be a structured datatype.') + + content = file.read() + if isinstance(content, bytes) and isinstance(regexp, str): + regexp = asbytes(regexp) + + if not hasattr(regexp, 'match'): + regexp = re.compile(regexp) + seq = regexp.findall(content) + if seq and not isinstance(seq[0], tuple): + # Only one group is in the regexp. + # Create the new array as a single data-type and then + # re-interpret as a single-field structured array. + newdtype = np.dtype(dtype[dtype.names[0]]) + output = np.array(seq, dtype=newdtype) + output.dtype = dtype + else: + output = np.array(seq, dtype=dtype) + + return output + finally: + if own_fh: + file.close() + + +#####-------------------------------------------------------------------------- +#---- --- ASCII functions --- +#####-------------------------------------------------------------------------- + + +@set_array_function_like_doc +@set_module('numpy') +def genfromtxt(fname, dtype=float, comments='#', delimiter=None, + skip_header=0, skip_footer=0, converters=None, + missing_values=None, filling_values=None, usecols=None, + names=None, excludelist=None, + deletechars=''.join(sorted(NameValidator.defaultdeletechars)), + replace_space='_', autostrip=False, case_sensitive=True, + defaultfmt="f%i", unpack=None, usemask=False, loose=True, + invalid_raise=True, max_rows=None, encoding=None, + *, ndmin=0, like=None): + """ + Load data from a text file, with missing values handled as specified. + + Each line past the first `skip_header` lines is split at the `delimiter` + character, and characters following the `comments` character are discarded. + + Parameters + ---------- + fname : file, str, pathlib.Path, list of str, generator + File, filename, list, or generator to read. If the filename + extension is ``.gz`` or ``.bz2``, the file is first decompressed. Note + that generators must return bytes or strings. The strings + in a list or produced by a generator are treated as lines. + dtype : dtype, optional + Data type of the resulting array. + If None, the dtypes will be determined by the contents of each + column, individually. + comments : str, optional + The character used to indicate the start of a comment. + All the characters occurring on a line after a comment are discarded. + delimiter : str, int, or sequence, optional + The string used to separate values. By default, any consecutive + whitespaces act as delimiter. An integer or sequence of integers + can also be provided as width(s) of each field. + skiprows : int, optional + `skiprows` was removed in numpy 1.10. Please use `skip_header` instead. + skip_header : int, optional + The number of lines to skip at the beginning of the file. + skip_footer : int, optional + The number of lines to skip at the end of the file. + converters : variable, optional + The set of functions that convert the data of a column to a value. + The converters can also be used to provide a default value + for missing data: ``converters = {3: lambda s: float(s or 0)}``. + missing : variable, optional + `missing` was removed in numpy 1.10. Please use `missing_values` + instead. + missing_values : variable, optional + The set of strings corresponding to missing data. + filling_values : variable, optional + The set of values to be used as default when the data are missing. + usecols : sequence, optional + Which columns to read, with 0 being the first. For example, + ``usecols = (1, 4, 5)`` will extract the 2nd, 5th and 6th columns. + names : {None, True, str, sequence}, optional + If `names` is True, the field names are read from the first line after + the first `skip_header` lines. This line can optionally be preceded + by a comment delimiter. Any content before the comment delimiter is + discarded. If `names` is a sequence or a single-string of + comma-separated names, the names will be used to define the field + names in a structured dtype. If `names` is None, the names of the + dtype fields will be used, if any. + excludelist : sequence, optional + A list of names to exclude. This list is appended to the default list + ['return','file','print']. Excluded names are appended with an + underscore: for example, `file` would become `file_`. + deletechars : str, optional + A string combining invalid characters that must be deleted from the + names. + defaultfmt : str, optional + A format used to define default field names, such as "f%i" or "f_%02i". + autostrip : bool, optional + Whether to automatically strip white spaces from the variables. + replace_space : char, optional + Character(s) used in replacement of white spaces in the variable + names. By default, use a '_'. + case_sensitive : {True, False, 'upper', 'lower'}, optional + If True, field names are case sensitive. + If False or 'upper', field names are converted to upper case. + If 'lower', field names are converted to lower case. + unpack : bool, optional + If True, the returned array is transposed, so that arguments may be + unpacked using ``x, y, z = genfromtxt(...)``. When used with a + structured data-type, arrays are returned for each field. + Default is False. + usemask : bool, optional + If True, return a masked array. + If False, return a regular array. + loose : bool, optional + If True, do not raise errors for invalid values. + invalid_raise : bool, optional + If True, an exception is raised if an inconsistency is detected in the + number of columns. + If False, a warning is emitted and the offending lines are skipped. + max_rows : int, optional + The maximum number of rows to read. Must not be used with skip_footer + at the same time. If given, the value must be at least 1. Default is + to read the entire file. + + .. versionadded:: 1.10.0 + encoding : str, optional + Encoding used to decode the inputfile. Does not apply when `fname` + is a file object. The special value 'bytes' enables backward + compatibility workarounds that ensure that you receive byte arrays + when possible and passes latin1 encoded strings to converters. + Override this value to receive unicode arrays and pass strings + as input to converters. If set to None the system default is used. + The default value is 'bytes'. + + .. versionadded:: 1.14.0 + .. versionchanged:: 2.0 + Before NumPy 2, the default was ``'bytes'`` for Python 2 + compatibility. The default is now ``None``. + + ndmin : int, optional + Same parameter as `loadtxt` + + .. versionadded:: 1.23.0 + ${ARRAY_FUNCTION_LIKE} + + .. versionadded:: 1.20.0 + + Returns + ------- + out : ndarray + Data read from the text file. If `usemask` is True, this is a + masked array. + + See Also + -------- + numpy.loadtxt : equivalent function when no data is missing. + + Notes + ----- + * When spaces are used as delimiters, or when no delimiter has been given + as input, there should not be any missing data between two fields. + * When variables are named (either by a flexible dtype or with a `names` + sequence), there must not be any header in the file (else a ValueError + exception is raised). + * Individual values are not stripped of spaces by default. + When using a custom converter, make sure the function does remove spaces. + * Custom converters may receive unexpected values due to dtype + discovery. + + References + ---------- + .. [1] NumPy User Guide, section `I/O with NumPy + `_. + + Examples + -------- + >>> from io import StringIO + >>> import numpy as np + + Comma delimited file with mixed dtype + + >>> s = StringIO("1,1.3,abcde") + >>> data = np.genfromtxt(s, dtype=[('myint','i8'),('myfloat','f8'), + ... ('mystring','S5')], delimiter=",") + >>> data + array((1, 1.3, b'abcde'), + dtype=[('myint', '>> _ = s.seek(0) # needed for StringIO example only + >>> data = np.genfromtxt(s, dtype=None, + ... names = ['myint','myfloat','mystring'], delimiter=",") + >>> data + array((1, 1.3, 'abcde'), + dtype=[('myint', '>> _ = s.seek(0) + >>> data = np.genfromtxt(s, dtype="i8,f8,S5", + ... names=['myint','myfloat','mystring'], delimiter=",") + >>> data + array((1, 1.3, b'abcde'), + dtype=[('myint', '>> s = StringIO("11.3abcde") + >>> data = np.genfromtxt(s, dtype=None, names=['intvar','fltvar','strvar'], + ... delimiter=[1,3,5]) + >>> data + array((1, 1.3, 'abcde'), + dtype=[('intvar', '>> f = StringIO(''' + ... text,# of chars + ... hello world,11 + ... numpy,5''') + >>> np.genfromtxt(f, dtype='S12,S12', delimiter=',') + array([(b'text', b''), (b'hello world', b'11'), (b'numpy', b'5')], + dtype=[('f0', 'S12'), ('f1', 'S12')]) + + """ + + if like is not None: + return _genfromtxt_with_like( + like, fname, dtype=dtype, comments=comments, delimiter=delimiter, + skip_header=skip_header, skip_footer=skip_footer, + converters=converters, missing_values=missing_values, + filling_values=filling_values, usecols=usecols, names=names, + excludelist=excludelist, deletechars=deletechars, + replace_space=replace_space, autostrip=autostrip, + case_sensitive=case_sensitive, defaultfmt=defaultfmt, + unpack=unpack, usemask=usemask, loose=loose, + invalid_raise=invalid_raise, max_rows=max_rows, encoding=encoding, + ndmin=ndmin, + ) + + _ensure_ndmin_ndarray_check_param(ndmin) + + if max_rows is not None: + if skip_footer: + raise ValueError( + "The keywords 'skip_footer' and 'max_rows' can not be " + "specified at the same time.") + if max_rows < 1: + raise ValueError("'max_rows' must be at least 1.") + + if usemask: + from numpy.ma import MaskedArray, make_mask_descr + # Check the input dictionary of converters + user_converters = converters or {} + if not isinstance(user_converters, dict): + raise TypeError( + "The input argument 'converter' should be a valid dictionary " + "(got '%s' instead)" % type(user_converters)) + + if encoding == 'bytes': + encoding = None + byte_converters = True + else: + byte_converters = False + + # Initialize the filehandle, the LineSplitter and the NameValidator + if isinstance(fname, os.PathLike): + fname = os.fspath(fname) + if isinstance(fname, str): + fid = np.lib._datasource.open(fname, 'rt', encoding=encoding) + fid_ctx = contextlib.closing(fid) + else: + fid = fname + fid_ctx = contextlib.nullcontext(fid) + try: + fhd = iter(fid) + except TypeError as e: + raise TypeError( + "fname must be a string, a filehandle, a sequence of strings,\n" + f"or an iterator of strings. Got {type(fname)} instead." + ) from e + with fid_ctx: + split_line = LineSplitter(delimiter=delimiter, comments=comments, + autostrip=autostrip, encoding=encoding) + validate_names = NameValidator(excludelist=excludelist, + deletechars=deletechars, + case_sensitive=case_sensitive, + replace_space=replace_space) + + # Skip the first `skip_header` rows + try: + for i in range(skip_header): + next(fhd) + + # Keep on until we find the first valid values + first_values = None + + while not first_values: + first_line = _decode_line(next(fhd), encoding) + if (names is True) and (comments is not None): + if comments in first_line: + first_line = ( + ''.join(first_line.split(comments)[1:])) + first_values = split_line(first_line) + except StopIteration: + # return an empty array if the datafile is empty + first_line = '' + first_values = [] + warnings.warn( + 'genfromtxt: Empty input file: "%s"' % fname, stacklevel=2 + ) + + # Should we take the first values as names ? + if names is True: + fval = first_values[0].strip() + if comments is not None: + if fval in comments: + del first_values[0] + + # Check the columns to use: make sure `usecols` is a list + if usecols is not None: + try: + usecols = [_.strip() for _ in usecols.split(",")] + except AttributeError: + try: + usecols = list(usecols) + except TypeError: + usecols = [usecols, ] + nbcols = len(usecols or first_values) + + # Check the names and overwrite the dtype.names if needed + if names is True: + names = validate_names([str(_.strip()) for _ in first_values]) + first_line = '' + elif _is_string_like(names): + names = validate_names([_.strip() for _ in names.split(',')]) + elif names: + names = validate_names(names) + # Get the dtype + if dtype is not None: + dtype = easy_dtype(dtype, defaultfmt=defaultfmt, names=names, + excludelist=excludelist, + deletechars=deletechars, + case_sensitive=case_sensitive, + replace_space=replace_space) + # Make sure the names is a list (for 2.5) + if names is not None: + names = list(names) + + if usecols: + for (i, current) in enumerate(usecols): + # if usecols is a list of names, convert to a list of indices + if _is_string_like(current): + usecols[i] = names.index(current) + elif current < 0: + usecols[i] = current + len(first_values) + # If the dtype is not None, make sure we update it + if (dtype is not None) and (len(dtype) > nbcols): + descr = dtype.descr + dtype = np.dtype([descr[_] for _ in usecols]) + names = list(dtype.names) + # If `names` is not None, update the names + elif (names is not None) and (len(names) > nbcols): + names = [names[_] for _ in usecols] + elif (names is not None) and (dtype is not None): + names = list(dtype.names) + + # Process the missing values ............................... + # Rename missing_values for convenience + user_missing_values = missing_values or () + if isinstance(user_missing_values, bytes): + user_missing_values = user_missing_values.decode('latin1') + + # Define the list of missing_values (one column: one list) + missing_values = [list(['']) for _ in range(nbcols)] + + # We have a dictionary: process it field by field + if isinstance(user_missing_values, dict): + # Loop on the items + for (key, val) in user_missing_values.items(): + # Is the key a string ? + if _is_string_like(key): + try: + # Transform it into an integer + key = names.index(key) + except ValueError: + # We couldn't find it: the name must have been dropped + continue + # Redefine the key as needed if it's a column number + if usecols: + try: + key = usecols.index(key) + except ValueError: + pass + # Transform the value as a list of string + if isinstance(val, (list, tuple)): + val = [str(_) for _ in val] + else: + val = [str(val), ] + # Add the value(s) to the current list of missing + if key is None: + # None acts as default + for miss in missing_values: + miss.extend(val) + else: + missing_values[key].extend(val) + # We have a sequence : each item matches a column + elif isinstance(user_missing_values, (list, tuple)): + for (value, entry) in zip(user_missing_values, missing_values): + value = str(value) + if value not in entry: + entry.append(value) + # We have a string : apply it to all entries + elif isinstance(user_missing_values, str): + user_value = user_missing_values.split(",") + for entry in missing_values: + entry.extend(user_value) + # We have something else: apply it to all entries + else: + for entry in missing_values: + entry.extend([str(user_missing_values)]) + + # Process the filling_values ............................... + # Rename the input for convenience + user_filling_values = filling_values + if user_filling_values is None: + user_filling_values = [] + # Define the default + filling_values = [None] * nbcols + # We have a dictionary : update each entry individually + if isinstance(user_filling_values, dict): + for (key, val) in user_filling_values.items(): + if _is_string_like(key): + try: + # Transform it into an integer + key = names.index(key) + except ValueError: + # We couldn't find it: the name must have been dropped + continue + # Redefine the key if it's a column number + # and usecols is defined + if usecols: + try: + key = usecols.index(key) + except ValueError: + pass + # Add the value to the list + filling_values[key] = val + # We have a sequence : update on a one-to-one basis + elif isinstance(user_filling_values, (list, tuple)): + n = len(user_filling_values) + if (n <= nbcols): + filling_values[:n] = user_filling_values + else: + filling_values = user_filling_values[:nbcols] + # We have something else : use it for all entries + else: + filling_values = [user_filling_values] * nbcols + + # Initialize the converters ................................ + if dtype is None: + # Note: we can't use a [...]*nbcols, as we would have 3 times + # the same converter, instead of 3 different converters. + converters = [ + StringConverter(None, missing_values=miss, default=fill) + for (miss, fill) in zip(missing_values, filling_values) + ] + else: + dtype_flat = flatten_dtype(dtype, flatten_base=True) + # Initialize the converters + if len(dtype_flat) > 1: + # Flexible type : get a converter from each dtype + zipit = zip(dtype_flat, missing_values, filling_values) + converters = [StringConverter(dt, + locked=True, + missing_values=miss, + default=fill) + for (dt, miss, fill) in zipit] + else: + # Set to a default converter (but w/ different missing values) + zipit = zip(missing_values, filling_values) + converters = [StringConverter(dtype, + locked=True, + missing_values=miss, + default=fill) + for (miss, fill) in zipit] + # Update the converters to use the user-defined ones + uc_update = [] + for (j, conv) in user_converters.items(): + # If the converter is specified by column names, + # use the index instead + if _is_string_like(j): + try: + j = names.index(j) + i = j + except ValueError: + continue + elif usecols: + try: + i = usecols.index(j) + except ValueError: + # Unused converter specified + continue + else: + i = j + # Find the value to test - first_line is not filtered by usecols: + if len(first_line): + testing_value = first_values[j] + else: + testing_value = None + if conv is bytes: + user_conv = asbytes + elif byte_converters: + # Converters may use decode to workaround numpy's old + # behavior, so encode the string again before passing + # to the user converter. + def tobytes_first(x, conv): + if type(x) is bytes: + return conv(x) + return conv(x.encode("latin1")) + user_conv = functools.partial(tobytes_first, conv=conv) + else: + user_conv = conv + converters[i].update(user_conv, locked=True, + testing_value=testing_value, + default=filling_values[i], + missing_values=missing_values[i],) + uc_update.append((i, user_conv)) + # Make sure we have the corrected keys in user_converters... + user_converters.update(uc_update) + + # Fixme: possible error as following variable never used. + # miss_chars = [_.missing_values for _ in converters] + + # Initialize the output lists ... + # ... rows + rows = [] + append_to_rows = rows.append + # ... masks + if usemask: + masks = [] + append_to_masks = masks.append + # ... invalid + invalid = [] + append_to_invalid = invalid.append + + # Parse each line + for (i, line) in enumerate(itertools.chain([first_line, ], fhd)): + values = split_line(line) + nbvalues = len(values) + # Skip an empty line + if nbvalues == 0: + continue + if usecols: + # Select only the columns we need + try: + values = [values[_] for _ in usecols] + except IndexError: + append_to_invalid((i + skip_header + 1, nbvalues)) + continue + elif nbvalues != nbcols: + append_to_invalid((i + skip_header + 1, nbvalues)) + continue + # Store the values + append_to_rows(tuple(values)) + if usemask: + append_to_masks(tuple([v.strip() in m + for (v, m) in zip(values, + missing_values)])) + if len(rows) == max_rows: + break + + # Upgrade the converters (if needed) + if dtype is None: + for (i, converter) in enumerate(converters): + current_column = [itemgetter(i)(_m) for _m in rows] + try: + converter.iterupgrade(current_column) + except ConverterLockError: + errmsg = "Converter #%i is locked and cannot be upgraded: " % i + current_column = map(itemgetter(i), rows) + for (j, value) in enumerate(current_column): + try: + converter.upgrade(value) + except (ConverterError, ValueError): + errmsg += "(occurred line #%i for value '%s')" + errmsg %= (j + 1 + skip_header, value) + raise ConverterError(errmsg) + + # Check that we don't have invalid values + nbinvalid = len(invalid) + if nbinvalid > 0: + nbrows = len(rows) + nbinvalid - skip_footer + # Construct the error message + template = " Line #%%i (got %%i columns instead of %i)" % nbcols + if skip_footer > 0: + nbinvalid_skipped = len([_ for _ in invalid + if _[0] > nbrows + skip_header]) + invalid = invalid[:nbinvalid - nbinvalid_skipped] + skip_footer -= nbinvalid_skipped +# +# nbrows -= skip_footer +# errmsg = [template % (i, nb) +# for (i, nb) in invalid if i < nbrows] +# else: + errmsg = [template % (i, nb) + for (i, nb) in invalid] + if len(errmsg): + errmsg.insert(0, "Some errors were detected !") + errmsg = "\n".join(errmsg) + # Raise an exception ? + if invalid_raise: + raise ValueError(errmsg) + # Issue a warning ? + else: + warnings.warn(errmsg, ConversionWarning, stacklevel=2) + + # Strip the last skip_footer data + if skip_footer > 0: + rows = rows[:-skip_footer] + if usemask: + masks = masks[:-skip_footer] + + # Convert each value according to the converter: + # We want to modify the list in place to avoid creating a new one... + if loose: + rows = list( + zip(*[[conv._loose_call(_r) for _r in map(itemgetter(i), rows)] + for (i, conv) in enumerate(converters)])) + else: + rows = list( + zip(*[[conv._strict_call(_r) for _r in map(itemgetter(i), rows)] + for (i, conv) in enumerate(converters)])) + + # Reset the dtype + data = rows + if dtype is None: + # Get the dtypes from the types of the converters + column_types = [conv.type for conv in converters] + # Find the columns with strings... + strcolidx = [i for (i, v) in enumerate(column_types) + if v == np.str_] + + if byte_converters and strcolidx: + # convert strings back to bytes for backward compatibility + warnings.warn( + "Reading unicode strings without specifying the encoding " + "argument is deprecated. Set the encoding, use None for the " + "system default.", + np.exceptions.VisibleDeprecationWarning, stacklevel=2) + + def encode_unicode_cols(row_tup): + row = list(row_tup) + for i in strcolidx: + row[i] = row[i].encode('latin1') + return tuple(row) + + try: + data = [encode_unicode_cols(r) for r in data] + except UnicodeEncodeError: + pass + else: + for i in strcolidx: + column_types[i] = np.bytes_ + + # Update string types to be the right length + sized_column_types = column_types[:] + for i, col_type in enumerate(column_types): + if np.issubdtype(col_type, np.character): + n_chars = max(len(row[i]) for row in data) + sized_column_types[i] = (col_type, n_chars) + + if names is None: + # If the dtype is uniform (before sizing strings) + base = { + c_type + for c, c_type in zip(converters, column_types) + if c._checked} + if len(base) == 1: + uniform_type, = base + (ddtype, mdtype) = (uniform_type, bool) + else: + ddtype = [(defaultfmt % i, dt) + for (i, dt) in enumerate(sized_column_types)] + if usemask: + mdtype = [(defaultfmt % i, bool) + for (i, dt) in enumerate(sized_column_types)] + else: + ddtype = list(zip(names, sized_column_types)) + mdtype = list(zip(names, [bool] * len(sized_column_types))) + output = np.array(data, dtype=ddtype) + if usemask: + outputmask = np.array(masks, dtype=mdtype) + else: + # Overwrite the initial dtype names if needed + if names and dtype.names is not None: + dtype.names = names + # Case 1. We have a structured type + if len(dtype_flat) > 1: + # Nested dtype, eg [('a', int), ('b', [('b0', int), ('b1', 'f4')])] + # First, create the array using a flattened dtype: + # [('a', int), ('b1', int), ('b2', float)] + # Then, view the array using the specified dtype. + if 'O' in (_.char for _ in dtype_flat): + if has_nested_fields(dtype): + raise NotImplementedError( + "Nested fields involving objects are not supported...") + else: + output = np.array(data, dtype=dtype) + else: + rows = np.array(data, dtype=[('', _) for _ in dtype_flat]) + output = rows.view(dtype) + # Now, process the rowmasks the same way + if usemask: + rowmasks = np.array( + masks, dtype=np.dtype([('', bool) for t in dtype_flat])) + # Construct the new dtype + mdtype = make_mask_descr(dtype) + outputmask = rowmasks.view(mdtype) + # Case #2. We have a basic dtype + else: + # We used some user-defined converters + if user_converters: + ishomogeneous = True + descr = [] + for i, ttype in enumerate([conv.type for conv in converters]): + # Keep the dtype of the current converter + if i in user_converters: + ishomogeneous &= (ttype == dtype.type) + if np.issubdtype(ttype, np.character): + ttype = (ttype, max(len(row[i]) for row in data)) + descr.append(('', ttype)) + else: + descr.append(('', dtype)) + # So we changed the dtype ? + if not ishomogeneous: + # We have more than one field + if len(descr) > 1: + dtype = np.dtype(descr) + # We have only one field: drop the name if not needed. + else: + dtype = np.dtype(ttype) + # + output = np.array(data, dtype) + if usemask: + if dtype.names is not None: + mdtype = [(_, bool) for _ in dtype.names] + else: + mdtype = bool + outputmask = np.array(masks, dtype=mdtype) + # Try to take care of the missing data we missed + names = output.dtype.names + if usemask and names: + for (name, conv) in zip(names, converters): + missing_values = [conv(_) for _ in conv.missing_values + if _ != ''] + for mval in missing_values: + outputmask[name] |= (output[name] == mval) + # Construct the final array + if usemask: + output = output.view(MaskedArray) + output._mask = outputmask + + output = _ensure_ndmin_ndarray(output, ndmin=ndmin) + + if unpack: + if names is None: + return output.T + elif len(names) == 1: + # squeeze single-name dtypes too + return output[names[0]] + else: + # For structured arrays with multiple fields, + # return an array for each field. + return [output[field] for field in names] + return output + + +_genfromtxt_with_like = array_function_dispatch()(genfromtxt) + + +def recfromtxt(fname, **kwargs): + """ + Load ASCII data from a file and return it in a record array. + + If ``usemask=False`` a standard `recarray` is returned, + if ``usemask=True`` a MaskedRecords array is returned. + + .. deprecated:: 2.0 + Use `numpy.genfromtxt` instead. + + Parameters + ---------- + fname, kwargs : For a description of input parameters, see `genfromtxt`. + + See Also + -------- + numpy.genfromtxt : generic function + + Notes + ----- + By default, `dtype` is None, which means that the data-type of the output + array will be determined from the data. + + """ + + # Deprecated in NumPy 2.0, 2023-07-11 + warnings.warn( + "`recfromtxt` is deprecated, " + "use `numpy.genfromtxt` instead." + "(deprecated in NumPy 2.0)", + DeprecationWarning, + stacklevel=2 + ) + + kwargs.setdefault("dtype", None) + usemask = kwargs.get('usemask', False) + output = genfromtxt(fname, **kwargs) + if usemask: + from numpy.ma.mrecords import MaskedRecords + output = output.view(MaskedRecords) + else: + output = output.view(np.recarray) + return output + + +def recfromcsv(fname, **kwargs): + """ + Load ASCII data stored in a comma-separated file. + + The returned array is a record array (if ``usemask=False``, see + `recarray`) or a masked record array (if ``usemask=True``, + see `ma.mrecords.MaskedRecords`). + + .. deprecated:: 2.0 + Use `numpy.genfromtxt` with comma as `delimiter` instead. + + Parameters + ---------- + fname, kwargs : For a description of input parameters, see `genfromtxt`. + + See Also + -------- + numpy.genfromtxt : generic function to load ASCII data. + + Notes + ----- + By default, `dtype` is None, which means that the data-type of the output + array will be determined from the data. + + """ + + # Deprecated in NumPy 2.0, 2023-07-11 + warnings.warn( + "`recfromcsv` is deprecated, " + "use `numpy.genfromtxt` with comma as `delimiter` instead. " + "(deprecated in NumPy 2.0)", + DeprecationWarning, + stacklevel=2 + ) + + # Set default kwargs for genfromtxt as relevant to csv import. + kwargs.setdefault("case_sensitive", "lower") + kwargs.setdefault("names", True) + kwargs.setdefault("delimiter", ",") + kwargs.setdefault("dtype", None) + output = genfromtxt(fname, **kwargs) + + usemask = kwargs.get("usemask", False) + if usemask: + from numpy.ma.mrecords import MaskedRecords + output = output.view(MaskedRecords) + else: + output = output.view(np.recarray) + return output diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_npyio_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_npyio_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..d9b43578d798159eb86488773c3d5aca6fc35478 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_npyio_impl.pyi @@ -0,0 +1,348 @@ +import os +import sys +import zipfile +import types +from re import Pattern +from collections.abc import Collection, Mapping, Iterator, Sequence, Callable, Iterable +from typing import ( + Literal as L, + Any, + TypeVar, + Generic, + IO, + overload, + Protocol, +) + +from numpy import ( + ndarray, + recarray, + dtype, + generic, + float64, + void, + record, +) + +from numpy.ma.mrecords import MaskedRecords +from numpy._typing import ( + ArrayLike, + DTypeLike, + NDArray, + _DTypeLike, + _SupportsArrayFunc, +) + +from numpy._core.multiarray import ( + packbits as packbits, + unpackbits as unpackbits, +) + +_T = TypeVar("_T") +_T_contra = TypeVar("_T_contra", contravariant=True) +_T_co = TypeVar("_T_co", covariant=True) +_SCT = TypeVar("_SCT", bound=generic) +_CharType_co = TypeVar("_CharType_co", str, bytes, covariant=True) +_CharType_contra = TypeVar("_CharType_contra", str, bytes, contravariant=True) + +class _SupportsGetItem(Protocol[_T_contra, _T_co]): + def __getitem__(self, key: _T_contra, /) -> _T_co: ... + +class _SupportsRead(Protocol[_CharType_co]): + def read(self) -> _CharType_co: ... + +class _SupportsReadSeek(Protocol[_CharType_co]): + def read(self, n: int, /) -> _CharType_co: ... + def seek(self, offset: int, whence: int, /) -> object: ... + +class _SupportsWrite(Protocol[_CharType_contra]): + def write(self, s: _CharType_contra, /) -> object: ... + +__all__: list[str] + +class BagObj(Generic[_T_co]): + def __init__(self, obj: _SupportsGetItem[str, _T_co]) -> None: ... + def __getattribute__(self, key: str) -> _T_co: ... + def __dir__(self) -> list[str]: ... + +class NpzFile(Mapping[str, NDArray[Any]]): + zip: zipfile.ZipFile + fid: None | IO[str] + files: list[str] + allow_pickle: bool + pickle_kwargs: None | Mapping[str, Any] + _MAX_REPR_ARRAY_COUNT: int + # Represent `f` as a mutable property so we can access the type of `self` + @property + def f(self: _T) -> BagObj[_T]: ... + @f.setter + def f(self: _T, value: BagObj[_T]) -> None: ... + def __init__( + self, + fid: IO[str], + own_fid: bool = ..., + allow_pickle: bool = ..., + pickle_kwargs: None | Mapping[str, Any] = ..., + ) -> None: ... + def __enter__(self: _T) -> _T: ... + def __exit__( + self, + exc_type: None | type[BaseException], + exc_value: None | BaseException, + traceback: None | types.TracebackType, + /, + ) -> None: ... + def close(self) -> None: ... + def __del__(self) -> None: ... + def __iter__(self) -> Iterator[str]: ... + def __len__(self) -> int: ... + def __getitem__(self, key: str) -> NDArray[Any]: ... + def __contains__(self, key: str) -> bool: ... + def __repr__(self) -> str: ... + +class DataSource: + def __init__( + self, + destpath: None | str | os.PathLike[str] = ..., + ) -> None: ... + def __del__(self) -> None: ... + def abspath(self, path: str) -> str: ... + def exists(self, path: str) -> bool: ... + + # Whether the file-object is opened in string or bytes mode (by default) + # depends on the file-extension of `path` + def open( + self, + path: str, + mode: str = ..., + encoding: None | str = ..., + newline: None | str = ..., + ) -> IO[Any]: ... + +# NOTE: Returns a `NpzFile` if file is a zip file; +# returns an `ndarray`/`memmap` otherwise +def load( + file: str | bytes | os.PathLike[Any] | _SupportsReadSeek[bytes], + mmap_mode: L[None, "r+", "r", "w+", "c"] = ..., + allow_pickle: bool = ..., + fix_imports: bool = ..., + encoding: L["ASCII", "latin1", "bytes"] = ..., +) -> Any: ... + +def save( + file: str | os.PathLike[str] | _SupportsWrite[bytes], + arr: ArrayLike, + allow_pickle: bool = ..., + fix_imports: bool = ..., +) -> None: ... + +def savez( + file: str | os.PathLike[str] | _SupportsWrite[bytes], + *args: ArrayLike, + **kwds: ArrayLike, +) -> None: ... + +def savez_compressed( + file: str | os.PathLike[str] | _SupportsWrite[bytes], + *args: ArrayLike, + **kwds: ArrayLike, +) -> None: ... + +# File-like objects only have to implement `__iter__` and, +# optionally, `encoding` +@overload +def loadtxt( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + dtype: None = ..., + comments: None | str | Sequence[str] = ..., + delimiter: None | str = ..., + converters: None | Mapping[int | str, Callable[[str], Any]] = ..., + skiprows: int = ..., + usecols: int | Sequence[int] = ..., + unpack: bool = ..., + ndmin: L[0, 1, 2] = ..., + encoding: None | str = ..., + max_rows: None | int = ..., + *, + quotechar: None | str = ..., + like: None | _SupportsArrayFunc = ... +) -> NDArray[float64]: ... +@overload +def loadtxt( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + dtype: _DTypeLike[_SCT], + comments: None | str | Sequence[str] = ..., + delimiter: None | str = ..., + converters: None | Mapping[int | str, Callable[[str], Any]] = ..., + skiprows: int = ..., + usecols: int | Sequence[int] = ..., + unpack: bool = ..., + ndmin: L[0, 1, 2] = ..., + encoding: None | str = ..., + max_rows: None | int = ..., + *, + quotechar: None | str = ..., + like: None | _SupportsArrayFunc = ... +) -> NDArray[_SCT]: ... +@overload +def loadtxt( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + dtype: DTypeLike, + comments: None | str | Sequence[str] = ..., + delimiter: None | str = ..., + converters: None | Mapping[int | str, Callable[[str], Any]] = ..., + skiprows: int = ..., + usecols: int | Sequence[int] = ..., + unpack: bool = ..., + ndmin: L[0, 1, 2] = ..., + encoding: None | str = ..., + max_rows: None | int = ..., + *, + quotechar: None | str = ..., + like: None | _SupportsArrayFunc = ... +) -> NDArray[Any]: ... + +def savetxt( + fname: str | os.PathLike[str] | _SupportsWrite[str] | _SupportsWrite[bytes], + X: ArrayLike, + fmt: str | Sequence[str] = ..., + delimiter: str = ..., + newline: str = ..., + header: str = ..., + footer: str = ..., + comments: str = ..., + encoding: None | str = ..., +) -> None: ... + +@overload +def fromregex( + file: str | os.PathLike[str] | _SupportsRead[str] | _SupportsRead[bytes], + regexp: str | bytes | Pattern[Any], + dtype: _DTypeLike[_SCT], + encoding: None | str = ... +) -> NDArray[_SCT]: ... +@overload +def fromregex( + file: str | os.PathLike[str] | _SupportsRead[str] | _SupportsRead[bytes], + regexp: str | bytes | Pattern[Any], + dtype: DTypeLike, + encoding: None | str = ... +) -> NDArray[Any]: ... + +@overload +def genfromtxt( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + dtype: None = ..., + comments: str = ..., + delimiter: None | str | int | Iterable[int] = ..., + skip_header: int = ..., + skip_footer: int = ..., + converters: None | Mapping[int | str, Callable[[str], Any]] = ..., + missing_values: Any = ..., + filling_values: Any = ..., + usecols: None | Sequence[int] = ..., + names: L[None, True] | str | Collection[str] = ..., + excludelist: None | Sequence[str] = ..., + deletechars: str = ..., + replace_space: str = ..., + autostrip: bool = ..., + case_sensitive: bool | L['upper', 'lower'] = ..., + defaultfmt: str = ..., + unpack: None | bool = ..., + usemask: bool = ..., + loose: bool = ..., + invalid_raise: bool = ..., + max_rows: None | int = ..., + encoding: str = ..., + *, + ndmin: L[0, 1, 2] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... +@overload +def genfromtxt( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + dtype: _DTypeLike[_SCT], + comments: str = ..., + delimiter: None | str | int | Iterable[int] = ..., + skip_header: int = ..., + skip_footer: int = ..., + converters: None | Mapping[int | str, Callable[[str], Any]] = ..., + missing_values: Any = ..., + filling_values: Any = ..., + usecols: None | Sequence[int] = ..., + names: L[None, True] | str | Collection[str] = ..., + excludelist: None | Sequence[str] = ..., + deletechars: str = ..., + replace_space: str = ..., + autostrip: bool = ..., + case_sensitive: bool | L['upper', 'lower'] = ..., + defaultfmt: str = ..., + unpack: None | bool = ..., + usemask: bool = ..., + loose: bool = ..., + invalid_raise: bool = ..., + max_rows: None | int = ..., + encoding: str = ..., + *, + ndmin: L[0, 1, 2] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def genfromtxt( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + dtype: DTypeLike, + comments: str = ..., + delimiter: None | str | int | Iterable[int] = ..., + skip_header: int = ..., + skip_footer: int = ..., + converters: None | Mapping[int | str, Callable[[str], Any]] = ..., + missing_values: Any = ..., + filling_values: Any = ..., + usecols: None | Sequence[int] = ..., + names: L[None, True] | str | Collection[str] = ..., + excludelist: None | Sequence[str] = ..., + deletechars: str = ..., + replace_space: str = ..., + autostrip: bool = ..., + case_sensitive: bool | L['upper', 'lower'] = ..., + defaultfmt: str = ..., + unpack: None | bool = ..., + usemask: bool = ..., + loose: bool = ..., + invalid_raise: bool = ..., + max_rows: None | int = ..., + encoding: str = ..., + *, + ndmin: L[0, 1, 2] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def recfromtxt( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + *, + usemask: L[False] = ..., + **kwargs: Any, +) -> recarray[Any, dtype[record]]: ... +@overload +def recfromtxt( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + *, + usemask: L[True], + **kwargs: Any, +) -> MaskedRecords[Any, dtype[void]]: ... + +@overload +def recfromcsv( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + *, + usemask: L[False] = ..., + **kwargs: Any, +) -> recarray[Any, dtype[record]]: ... +@overload +def recfromcsv( + fname: str | os.PathLike[str] | Iterable[str] | Iterable[bytes], + *, + usemask: L[True], + **kwargs: Any, +) -> MaskedRecords[Any, dtype[void]]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_polynomial_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_polynomial_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..63c12f43824055afd8d2ea06df92c80ed4a5b54d --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_polynomial_impl.py @@ -0,0 +1,1442 @@ +""" +Functions to operate on polynomials. + +""" +__all__ = ['poly', 'roots', 'polyint', 'polyder', 'polyadd', + 'polysub', 'polymul', 'polydiv', 'polyval', 'poly1d', + 'polyfit'] + +import functools +import re +import warnings + +from .._utils import set_module +import numpy._core.numeric as NX + +from numpy._core import (isscalar, abs, finfo, atleast_1d, hstack, dot, array, + ones) +from numpy._core import overrides +from numpy.exceptions import RankWarning +from numpy.lib._twodim_base_impl import diag, vander +from numpy.lib._function_base_impl import trim_zeros +from numpy.lib._type_check_impl import iscomplex, real, imag, mintypecode +from numpy.linalg import eigvals, lstsq, inv + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +def _poly_dispatcher(seq_of_zeros): + return seq_of_zeros + + +@array_function_dispatch(_poly_dispatcher) +def poly(seq_of_zeros): + """ + Find the coefficients of a polynomial with the given sequence of roots. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + Returns the coefficients of the polynomial whose leading coefficient + is one for the given sequence of zeros (multiple roots must be included + in the sequence as many times as their multiplicity; see Examples). + A square matrix (or array, which will be treated as a matrix) can also + be given, in which case the coefficients of the characteristic polynomial + of the matrix are returned. + + Parameters + ---------- + seq_of_zeros : array_like, shape (N,) or (N, N) + A sequence of polynomial roots, or a square array or matrix object. + + Returns + ------- + c : ndarray + 1D array of polynomial coefficients from highest to lowest degree: + + ``c[0] * x**(N) + c[1] * x**(N-1) + ... + c[N-1] * x + c[N]`` + where c[0] always equals 1. + + Raises + ------ + ValueError + If input is the wrong shape (the input must be a 1-D or square + 2-D array). + + See Also + -------- + polyval : Compute polynomial values. + roots : Return the roots of a polynomial. + polyfit : Least squares polynomial fit. + poly1d : A one-dimensional polynomial class. + + Notes + ----- + Specifying the roots of a polynomial still leaves one degree of + freedom, typically represented by an undetermined leading + coefficient. [1]_ In the case of this function, that coefficient - + the first one in the returned array - is always taken as one. (If + for some reason you have one other point, the only automatic way + presently to leverage that information is to use ``polyfit``.) + + The characteristic polynomial, :math:`p_a(t)`, of an `n`-by-`n` + matrix **A** is given by + + :math:`p_a(t) = \\mathrm{det}(t\\, \\mathbf{I} - \\mathbf{A})`, + + where **I** is the `n`-by-`n` identity matrix. [2]_ + + References + ---------- + .. [1] M. Sullivan and M. Sullivan, III, "Algebra and Trigonometry, + Enhanced With Graphing Utilities," Prentice-Hall, pg. 318, 1996. + + .. [2] G. Strang, "Linear Algebra and Its Applications, 2nd Edition," + Academic Press, pg. 182, 1980. + + Examples + -------- + Given a sequence of a polynomial's zeros: + + >>> np.poly((0, 0, 0)) # Multiple root example + array([1., 0., 0., 0.]) + + The line above represents z**3 + 0*z**2 + 0*z + 0. + + >>> np.poly((-1./2, 0, 1./2)) + array([ 1. , 0. , -0.25, 0. ]) + + The line above represents z**3 - z/4 + + >>> np.poly((np.random.random(1)[0], 0, np.random.random(1)[0])) + array([ 1. , -0.77086955, 0.08618131, 0. ]) # random + + Given a square array object: + + >>> P = np.array([[0, 1./3], [-1./2, 0]]) + >>> np.poly(P) + array([1. , 0. , 0.16666667]) + + Note how in all cases the leading coefficient is always 1. + + """ + seq_of_zeros = atleast_1d(seq_of_zeros) + sh = seq_of_zeros.shape + + if len(sh) == 2 and sh[0] == sh[1] and sh[0] != 0: + seq_of_zeros = eigvals(seq_of_zeros) + elif len(sh) == 1: + dt = seq_of_zeros.dtype + # Let object arrays slip through, e.g. for arbitrary precision + if dt != object: + seq_of_zeros = seq_of_zeros.astype(mintypecode(dt.char)) + else: + raise ValueError("input must be 1d or non-empty square 2d array.") + + if len(seq_of_zeros) == 0: + return 1.0 + dt = seq_of_zeros.dtype + a = ones((1,), dtype=dt) + for zero in seq_of_zeros: + a = NX.convolve(a, array([1, -zero], dtype=dt), mode='full') + + if issubclass(a.dtype.type, NX.complexfloating): + # if complex roots are all complex conjugates, the roots are real. + roots = NX.asarray(seq_of_zeros, complex) + if NX.all(NX.sort(roots) == NX.sort(roots.conjugate())): + a = a.real.copy() + + return a + + +def _roots_dispatcher(p): + return p + + +@array_function_dispatch(_roots_dispatcher) +def roots(p): + """ + Return the roots of a polynomial with coefficients given in p. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + The values in the rank-1 array `p` are coefficients of a polynomial. + If the length of `p` is n+1 then the polynomial is described by:: + + p[0] * x**n + p[1] * x**(n-1) + ... + p[n-1]*x + p[n] + + Parameters + ---------- + p : array_like + Rank-1 array of polynomial coefficients. + + Returns + ------- + out : ndarray + An array containing the roots of the polynomial. + + Raises + ------ + ValueError + When `p` cannot be converted to a rank-1 array. + + See also + -------- + poly : Find the coefficients of a polynomial with a given sequence + of roots. + polyval : Compute polynomial values. + polyfit : Least squares polynomial fit. + poly1d : A one-dimensional polynomial class. + + Notes + ----- + The algorithm relies on computing the eigenvalues of the + companion matrix [1]_. + + References + ---------- + .. [1] R. A. Horn & C. R. Johnson, *Matrix Analysis*. Cambridge, UK: + Cambridge University Press, 1999, pp. 146-7. + + Examples + -------- + >>> coeff = [3.2, 2, 1] + >>> np.roots(coeff) + array([-0.3125+0.46351241j, -0.3125-0.46351241j]) + + """ + # If input is scalar, this makes it an array + p = atleast_1d(p) + if p.ndim != 1: + raise ValueError("Input must be a rank-1 array.") + + # find non-zero array entries + non_zero = NX.nonzero(NX.ravel(p))[0] + + # Return an empty array if polynomial is all zeros + if len(non_zero) == 0: + return NX.array([]) + + # find the number of trailing zeros -- this is the number of roots at 0. + trailing_zeros = len(p) - non_zero[-1] - 1 + + # strip leading and trailing zeros + p = p[int(non_zero[0]):int(non_zero[-1])+1] + + # casting: if incoming array isn't floating point, make it floating point. + if not issubclass(p.dtype.type, (NX.floating, NX.complexfloating)): + p = p.astype(float) + + N = len(p) + if N > 1: + # build companion matrix and find its eigenvalues (the roots) + A = diag(NX.ones((N-2,), p.dtype), -1) + A[0,:] = -p[1:] / p[0] + roots = eigvals(A) + else: + roots = NX.array([]) + + # tack any zeros onto the back of the array + roots = hstack((roots, NX.zeros(trailing_zeros, roots.dtype))) + return roots + + +def _polyint_dispatcher(p, m=None, k=None): + return (p,) + + +@array_function_dispatch(_polyint_dispatcher) +def polyint(p, m=1, k=None): + """ + Return an antiderivative (indefinite integral) of a polynomial. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + The returned order `m` antiderivative `P` of polynomial `p` satisfies + :math:`\\frac{d^m}{dx^m}P(x) = p(x)` and is defined up to `m - 1` + integration constants `k`. The constants determine the low-order + polynomial part + + .. math:: \\frac{k_{m-1}}{0!} x^0 + \\ldots + \\frac{k_0}{(m-1)!}x^{m-1} + + of `P` so that :math:`P^{(j)}(0) = k_{m-j-1}`. + + Parameters + ---------- + p : array_like or poly1d + Polynomial to integrate. + A sequence is interpreted as polynomial coefficients, see `poly1d`. + m : int, optional + Order of the antiderivative. (Default: 1) + k : list of `m` scalars or scalar, optional + Integration constants. They are given in the order of integration: + those corresponding to highest-order terms come first. + + If ``None`` (default), all constants are assumed to be zero. + If `m = 1`, a single scalar can be given instead of a list. + + See Also + -------- + polyder : derivative of a polynomial + poly1d.integ : equivalent method + + Examples + -------- + The defining property of the antiderivative: + + >>> p = np.poly1d([1,1,1]) + >>> P = np.polyint(p) + >>> P + poly1d([ 0.33333333, 0.5 , 1. , 0. ]) # may vary + >>> np.polyder(P) == p + True + + The integration constants default to zero, but can be specified: + + >>> P = np.polyint(p, 3) + >>> P(0) + 0.0 + >>> np.polyder(P)(0) + 0.0 + >>> np.polyder(P, 2)(0) + 0.0 + >>> P = np.polyint(p, 3, k=[6,5,3]) + >>> P + poly1d([ 0.01666667, 0.04166667, 0.16666667, 3. , 5. , 3. ]) # may vary + + Note that 3 = 6 / 2!, and that the constants are given in the order of + integrations. Constant of the highest-order polynomial term comes first: + + >>> np.polyder(P, 2)(0) + 6.0 + >>> np.polyder(P, 1)(0) + 5.0 + >>> P(0) + 3.0 + + """ + m = int(m) + if m < 0: + raise ValueError("Order of integral must be positive (see polyder)") + if k is None: + k = NX.zeros(m, float) + k = atleast_1d(k) + if len(k) == 1 and m > 1: + k = k[0]*NX.ones(m, float) + if len(k) < m: + raise ValueError( + "k must be a scalar or a rank-1 array of length 1 or >m.") + + truepoly = isinstance(p, poly1d) + p = NX.asarray(p) + if m == 0: + if truepoly: + return poly1d(p) + return p + else: + # Note: this must work also with object and integer arrays + y = NX.concatenate((p.__truediv__(NX.arange(len(p), 0, -1)), [k[0]])) + val = polyint(y, m - 1, k=k[1:]) + if truepoly: + return poly1d(val) + return val + + +def _polyder_dispatcher(p, m=None): + return (p,) + + +@array_function_dispatch(_polyder_dispatcher) +def polyder(p, m=1): + """ + Return the derivative of the specified order of a polynomial. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + Parameters + ---------- + p : poly1d or sequence + Polynomial to differentiate. + A sequence is interpreted as polynomial coefficients, see `poly1d`. + m : int, optional + Order of differentiation (default: 1) + + Returns + ------- + der : poly1d + A new polynomial representing the derivative. + + See Also + -------- + polyint : Anti-derivative of a polynomial. + poly1d : Class for one-dimensional polynomials. + + Examples + -------- + The derivative of the polynomial :math:`x^3 + x^2 + x^1 + 1` is: + + >>> p = np.poly1d([1,1,1,1]) + >>> p2 = np.polyder(p) + >>> p2 + poly1d([3, 2, 1]) + + which evaluates to: + + >>> p2(2.) + 17.0 + + We can verify this, approximating the derivative with + ``(f(x + h) - f(x))/h``: + + >>> (p(2. + 0.001) - p(2.)) / 0.001 + 17.007000999997857 + + The fourth-order derivative of a 3rd-order polynomial is zero: + + >>> np.polyder(p, 2) + poly1d([6, 2]) + >>> np.polyder(p, 3) + poly1d([6]) + >>> np.polyder(p, 4) + poly1d([0]) + + """ + m = int(m) + if m < 0: + raise ValueError("Order of derivative must be positive (see polyint)") + + truepoly = isinstance(p, poly1d) + p = NX.asarray(p) + n = len(p) - 1 + y = p[:-1] * NX.arange(n, 0, -1) + if m == 0: + val = p + else: + val = polyder(y, m - 1) + if truepoly: + val = poly1d(val) + return val + + +def _polyfit_dispatcher(x, y, deg, rcond=None, full=None, w=None, cov=None): + return (x, y, w) + + +@array_function_dispatch(_polyfit_dispatcher) +def polyfit(x, y, deg, rcond=None, full=False, w=None, cov=False): + """ + Least squares polynomial fit. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + Fit a polynomial ``p(x) = p[0] * x**deg + ... + p[deg]`` of degree `deg` + to points `(x, y)`. Returns a vector of coefficients `p` that minimises + the squared error in the order `deg`, `deg-1`, ... `0`. + + The `Polynomial.fit ` class + method is recommended for new code as it is more stable numerically. See + the documentation of the method for more information. + + Parameters + ---------- + x : array_like, shape (M,) + x-coordinates of the M sample points ``(x[i], y[i])``. + y : array_like, shape (M,) or (M, K) + y-coordinates of the sample points. Several data sets of sample + points sharing the same x-coordinates can be fitted at once by + passing in a 2D-array that contains one dataset per column. + deg : int + Degree of the fitting polynomial + rcond : float, optional + Relative condition number of the fit. Singular values smaller than + this relative to the largest singular value will be ignored. The + default value is len(x)*eps, where eps is the relative precision of + the float type, about 2e-16 in most cases. + full : bool, optional + Switch determining nature of return value. When it is False (the + default) just the coefficients are returned, when True diagnostic + information from the singular value decomposition is also returned. + w : array_like, shape (M,), optional + Weights. If not None, the weight ``w[i]`` applies to the unsquared + residual ``y[i] - y_hat[i]`` at ``x[i]``. Ideally the weights are + chosen so that the errors of the products ``w[i]*y[i]`` all have the + same variance. When using inverse-variance weighting, use + ``w[i] = 1/sigma(y[i])``. The default value is None. + cov : bool or str, optional + If given and not `False`, return not just the estimate but also its + covariance matrix. By default, the covariance are scaled by + chi2/dof, where dof = M - (deg + 1), i.e., the weights are presumed + to be unreliable except in a relative sense and everything is scaled + such that the reduced chi2 is unity. This scaling is omitted if + ``cov='unscaled'``, as is relevant for the case that the weights are + w = 1/sigma, with sigma known to be a reliable estimate of the + uncertainty. + + Returns + ------- + p : ndarray, shape (deg + 1,) or (deg + 1, K) + Polynomial coefficients, highest power first. If `y` was 2-D, the + coefficients for `k`-th data set are in ``p[:,k]``. + + residuals, rank, singular_values, rcond + These values are only returned if ``full == True`` + + - residuals -- sum of squared residuals of the least squares fit + - rank -- the effective rank of the scaled Vandermonde + coefficient matrix + - singular_values -- singular values of the scaled Vandermonde + coefficient matrix + - rcond -- value of `rcond`. + + For more details, see `numpy.linalg.lstsq`. + + V : ndarray, shape (deg + 1, deg + 1) or (deg + 1, deg + 1, K) + Present only if ``full == False`` and ``cov == True``. The covariance + matrix of the polynomial coefficient estimates. The diagonal of + this matrix are the variance estimates for each coefficient. If y + is a 2-D array, then the covariance matrix for the `k`-th data set + are in ``V[:,:,k]`` + + + Warns + ----- + RankWarning + The rank of the coefficient matrix in the least-squares fit is + deficient. The warning is only raised if ``full == False``. + + The warnings can be turned off by + + >>> import warnings + >>> warnings.simplefilter('ignore', np.exceptions.RankWarning) + + See Also + -------- + polyval : Compute polynomial values. + linalg.lstsq : Computes a least-squares fit. + scipy.interpolate.UnivariateSpline : Computes spline fits. + + Notes + ----- + The solution minimizes the squared error + + .. math:: + E = \\sum_{j=0}^k |p(x_j) - y_j|^2 + + in the equations:: + + x[0]**n * p[0] + ... + x[0] * p[n-1] + p[n] = y[0] + x[1]**n * p[0] + ... + x[1] * p[n-1] + p[n] = y[1] + ... + x[k]**n * p[0] + ... + x[k] * p[n-1] + p[n] = y[k] + + The coefficient matrix of the coefficients `p` is a Vandermonde matrix. + + `polyfit` issues a `~exceptions.RankWarning` when the least-squares fit is + badly conditioned. This implies that the best fit is not well-defined due + to numerical error. The results may be improved by lowering the polynomial + degree or by replacing `x` by `x` - `x`.mean(). The `rcond` parameter + can also be set to a value smaller than its default, but the resulting + fit may be spurious: including contributions from the small singular + values can add numerical noise to the result. + + Note that fitting polynomial coefficients is inherently badly conditioned + when the degree of the polynomial is large or the interval of sample points + is badly centered. The quality of the fit should always be checked in these + cases. When polynomial fits are not satisfactory, splines may be a good + alternative. + + References + ---------- + .. [1] Wikipedia, "Curve fitting", + https://en.wikipedia.org/wiki/Curve_fitting + .. [2] Wikipedia, "Polynomial interpolation", + https://en.wikipedia.org/wiki/Polynomial_interpolation + + Examples + -------- + >>> import warnings + >>> x = np.array([0.0, 1.0, 2.0, 3.0, 4.0, 5.0]) + >>> y = np.array([0.0, 0.8, 0.9, 0.1, -0.8, -1.0]) + >>> z = np.polyfit(x, y, 3) + >>> z + array([ 0.08703704, -0.81349206, 1.69312169, -0.03968254]) # may vary + + It is convenient to use `poly1d` objects for dealing with polynomials: + + >>> p = np.poly1d(z) + >>> p(0.5) + 0.6143849206349179 # may vary + >>> p(3.5) + -0.34732142857143039 # may vary + >>> p(10) + 22.579365079365115 # may vary + + High-order polynomials may oscillate wildly: + + >>> with warnings.catch_warnings(): + ... warnings.simplefilter('ignore', np.exceptions.RankWarning) + ... p30 = np.poly1d(np.polyfit(x, y, 30)) + ... + >>> p30(4) + -0.80000000000000204 # may vary + >>> p30(5) + -0.99999999999999445 # may vary + >>> p30(4.5) + -0.10547061179440398 # may vary + + Illustration: + + >>> import matplotlib.pyplot as plt + >>> xp = np.linspace(-2, 6, 100) + >>> _ = plt.plot(x, y, '.', xp, p(xp), '-', xp, p30(xp), '--') + >>> plt.ylim(-2,2) + (-2, 2) + >>> plt.show() + + """ + order = int(deg) + 1 + x = NX.asarray(x) + 0.0 + y = NX.asarray(y) + 0.0 + + # check arguments. + if deg < 0: + raise ValueError("expected deg >= 0") + if x.ndim != 1: + raise TypeError("expected 1D vector for x") + if x.size == 0: + raise TypeError("expected non-empty vector for x") + if y.ndim < 1 or y.ndim > 2: + raise TypeError("expected 1D or 2D array for y") + if x.shape[0] != y.shape[0]: + raise TypeError("expected x and y to have same length") + + # set rcond + if rcond is None: + rcond = len(x)*finfo(x.dtype).eps + + # set up least squares equation for powers of x + lhs = vander(x, order) + rhs = y + + # apply weighting + if w is not None: + w = NX.asarray(w) + 0.0 + if w.ndim != 1: + raise TypeError("expected a 1-d array for weights") + if w.shape[0] != y.shape[0]: + raise TypeError("expected w and y to have the same length") + lhs *= w[:, NX.newaxis] + if rhs.ndim == 2: + rhs *= w[:, NX.newaxis] + else: + rhs *= w + + # scale lhs to improve condition number and solve + scale = NX.sqrt((lhs*lhs).sum(axis=0)) + lhs /= scale + c, resids, rank, s = lstsq(lhs, rhs, rcond) + c = (c.T/scale).T # broadcast scale coefficients + + # warn on rank reduction, which indicates an ill conditioned matrix + if rank != order and not full: + msg = "Polyfit may be poorly conditioned" + warnings.warn(msg, RankWarning, stacklevel=2) + + if full: + return c, resids, rank, s, rcond + elif cov: + Vbase = inv(dot(lhs.T, lhs)) + Vbase /= NX.outer(scale, scale) + if cov == "unscaled": + fac = 1 + else: + if len(x) <= order: + raise ValueError("the number of data points must exceed order " + "to scale the covariance matrix") + # note, this used to be: fac = resids / (len(x) - order - 2.0) + # it was deciced that the "- 2" (originally justified by "Bayesian + # uncertainty analysis") is not what the user expects + # (see gh-11196 and gh-11197) + fac = resids / (len(x) - order) + if y.ndim == 1: + return c, Vbase * fac + else: + return c, Vbase[:,:, NX.newaxis] * fac + else: + return c + + +def _polyval_dispatcher(p, x): + return (p, x) + + +@array_function_dispatch(_polyval_dispatcher) +def polyval(p, x): + """ + Evaluate a polynomial at specific values. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + If `p` is of length N, this function returns the value:: + + p[0]*x**(N-1) + p[1]*x**(N-2) + ... + p[N-2]*x + p[N-1] + + If `x` is a sequence, then ``p(x)`` is returned for each element of ``x``. + If `x` is another polynomial then the composite polynomial ``p(x(t))`` + is returned. + + Parameters + ---------- + p : array_like or poly1d object + 1D array of polynomial coefficients (including coefficients equal + to zero) from highest degree to the constant term, or an + instance of poly1d. + x : array_like or poly1d object + A number, an array of numbers, or an instance of poly1d, at + which to evaluate `p`. + + Returns + ------- + values : ndarray or poly1d + If `x` is a poly1d instance, the result is the composition of the two + polynomials, i.e., `x` is "substituted" in `p` and the simplified + result is returned. In addition, the type of `x` - array_like or + poly1d - governs the type of the output: `x` array_like => `values` + array_like, `x` a poly1d object => `values` is also. + + See Also + -------- + poly1d: A polynomial class. + + Notes + ----- + Horner's scheme [1]_ is used to evaluate the polynomial. Even so, + for polynomials of high degree the values may be inaccurate due to + rounding errors. Use carefully. + + If `x` is a subtype of `ndarray` the return value will be of the same type. + + References + ---------- + .. [1] I. N. Bronshtein, K. A. Semendyayev, and K. A. Hirsch (Eng. + trans. Ed.), *Handbook of Mathematics*, New York, Van Nostrand + Reinhold Co., 1985, pg. 720. + + Examples + -------- + >>> np.polyval([3,0,1], 5) # 3 * 5**2 + 0 * 5**1 + 1 + 76 + >>> np.polyval([3,0,1], np.poly1d(5)) + poly1d([76]) + >>> np.polyval(np.poly1d([3,0,1]), 5) + 76 + >>> np.polyval(np.poly1d([3,0,1]), np.poly1d(5)) + poly1d([76]) + + """ + p = NX.asarray(p) + if isinstance(x, poly1d): + y = 0 + else: + x = NX.asanyarray(x) + y = NX.zeros_like(x) + for pv in p: + y = y * x + pv + return y + + +def _binary_op_dispatcher(a1, a2): + return (a1, a2) + + +@array_function_dispatch(_binary_op_dispatcher) +def polyadd(a1, a2): + """ + Find the sum of two polynomials. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + Returns the polynomial resulting from the sum of two input polynomials. + Each input must be either a poly1d object or a 1D sequence of polynomial + coefficients, from highest to lowest degree. + + Parameters + ---------- + a1, a2 : array_like or poly1d object + Input polynomials. + + Returns + ------- + out : ndarray or poly1d object + The sum of the inputs. If either input is a poly1d object, then the + output is also a poly1d object. Otherwise, it is a 1D array of + polynomial coefficients from highest to lowest degree. + + See Also + -------- + poly1d : A one-dimensional polynomial class. + poly, polyadd, polyder, polydiv, polyfit, polyint, polysub, polyval + + Examples + -------- + >>> np.polyadd([1, 2], [9, 5, 4]) + array([9, 6, 6]) + + Using poly1d objects: + + >>> p1 = np.poly1d([1, 2]) + >>> p2 = np.poly1d([9, 5, 4]) + >>> print(p1) + 1 x + 2 + >>> print(p2) + 2 + 9 x + 5 x + 4 + >>> print(np.polyadd(p1, p2)) + 2 + 9 x + 6 x + 6 + + """ + truepoly = (isinstance(a1, poly1d) or isinstance(a2, poly1d)) + a1 = atleast_1d(a1) + a2 = atleast_1d(a2) + diff = len(a2) - len(a1) + if diff == 0: + val = a1 + a2 + elif diff > 0: + zr = NX.zeros(diff, a1.dtype) + val = NX.concatenate((zr, a1)) + a2 + else: + zr = NX.zeros(abs(diff), a2.dtype) + val = a1 + NX.concatenate((zr, a2)) + if truepoly: + val = poly1d(val) + return val + + +@array_function_dispatch(_binary_op_dispatcher) +def polysub(a1, a2): + """ + Difference (subtraction) of two polynomials. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + Given two polynomials `a1` and `a2`, returns ``a1 - a2``. + `a1` and `a2` can be either array_like sequences of the polynomials' + coefficients (including coefficients equal to zero), or `poly1d` objects. + + Parameters + ---------- + a1, a2 : array_like or poly1d + Minuend and subtrahend polynomials, respectively. + + Returns + ------- + out : ndarray or poly1d + Array or `poly1d` object of the difference polynomial's coefficients. + + See Also + -------- + polyval, polydiv, polymul, polyadd + + Examples + -------- + .. math:: (2 x^2 + 10 x - 2) - (3 x^2 + 10 x -4) = (-x^2 + 2) + + >>> np.polysub([2, 10, -2], [3, 10, -4]) + array([-1, 0, 2]) + + """ + truepoly = (isinstance(a1, poly1d) or isinstance(a2, poly1d)) + a1 = atleast_1d(a1) + a2 = atleast_1d(a2) + diff = len(a2) - len(a1) + if diff == 0: + val = a1 - a2 + elif diff > 0: + zr = NX.zeros(diff, a1.dtype) + val = NX.concatenate((zr, a1)) - a2 + else: + zr = NX.zeros(abs(diff), a2.dtype) + val = a1 - NX.concatenate((zr, a2)) + if truepoly: + val = poly1d(val) + return val + + +@array_function_dispatch(_binary_op_dispatcher) +def polymul(a1, a2): + """ + Find the product of two polynomials. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + Finds the polynomial resulting from the multiplication of the two input + polynomials. Each input must be either a poly1d object or a 1D sequence + of polynomial coefficients, from highest to lowest degree. + + Parameters + ---------- + a1, a2 : array_like or poly1d object + Input polynomials. + + Returns + ------- + out : ndarray or poly1d object + The polynomial resulting from the multiplication of the inputs. If + either inputs is a poly1d object, then the output is also a poly1d + object. Otherwise, it is a 1D array of polynomial coefficients from + highest to lowest degree. + + See Also + -------- + poly1d : A one-dimensional polynomial class. + poly, polyadd, polyder, polydiv, polyfit, polyint, polysub, polyval + convolve : Array convolution. Same output as polymul, but has parameter + for overlap mode. + + Examples + -------- + >>> np.polymul([1, 2, 3], [9, 5, 1]) + array([ 9, 23, 38, 17, 3]) + + Using poly1d objects: + + >>> p1 = np.poly1d([1, 2, 3]) + >>> p2 = np.poly1d([9, 5, 1]) + >>> print(p1) + 2 + 1 x + 2 x + 3 + >>> print(p2) + 2 + 9 x + 5 x + 1 + >>> print(np.polymul(p1, p2)) + 4 3 2 + 9 x + 23 x + 38 x + 17 x + 3 + + """ + truepoly = (isinstance(a1, poly1d) or isinstance(a2, poly1d)) + a1, a2 = poly1d(a1), poly1d(a2) + val = NX.convolve(a1, a2) + if truepoly: + val = poly1d(val) + return val + + +def _polydiv_dispatcher(u, v): + return (u, v) + + +@array_function_dispatch(_polydiv_dispatcher) +def polydiv(u, v): + """ + Returns the quotient and remainder of polynomial division. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + The input arrays are the coefficients (including any coefficients + equal to zero) of the "numerator" (dividend) and "denominator" + (divisor) polynomials, respectively. + + Parameters + ---------- + u : array_like or poly1d + Dividend polynomial's coefficients. + + v : array_like or poly1d + Divisor polynomial's coefficients. + + Returns + ------- + q : ndarray + Coefficients, including those equal to zero, of the quotient. + r : ndarray + Coefficients, including those equal to zero, of the remainder. + + See Also + -------- + poly, polyadd, polyder, polydiv, polyfit, polyint, polymul, polysub + polyval + + Notes + ----- + Both `u` and `v` must be 0-d or 1-d (ndim = 0 or 1), but `u.ndim` need + not equal `v.ndim`. In other words, all four possible combinations - + ``u.ndim = v.ndim = 0``, ``u.ndim = v.ndim = 1``, + ``u.ndim = 1, v.ndim = 0``, and ``u.ndim = 0, v.ndim = 1`` - work. + + Examples + -------- + .. math:: \\frac{3x^2 + 5x + 2}{2x + 1} = 1.5x + 1.75, remainder 0.25 + + >>> x = np.array([3.0, 5.0, 2.0]) + >>> y = np.array([2.0, 1.0]) + >>> np.polydiv(x, y) + (array([1.5 , 1.75]), array([0.25])) + + """ + truepoly = (isinstance(u, poly1d) or isinstance(v, poly1d)) + u = atleast_1d(u) + 0.0 + v = atleast_1d(v) + 0.0 + # w has the common type + w = u[0] + v[0] + m = len(u) - 1 + n = len(v) - 1 + scale = 1. / v[0] + q = NX.zeros((max(m - n + 1, 1),), w.dtype) + r = u.astype(w.dtype) + for k in range(0, m-n+1): + d = scale * r[k] + q[k] = d + r[k:k+n+1] -= d*v + while NX.allclose(r[0], 0, rtol=1e-14) and (r.shape[-1] > 1): + r = r[1:] + if truepoly: + return poly1d(q), poly1d(r) + return q, r + +_poly_mat = re.compile(r"\*\*([0-9]*)") +def _raise_power(astr, wrap=70): + n = 0 + line1 = '' + line2 = '' + output = ' ' + while True: + mat = _poly_mat.search(astr, n) + if mat is None: + break + span = mat.span() + power = mat.groups()[0] + partstr = astr[n:span[0]] + n = span[1] + toadd2 = partstr + ' '*(len(power)-1) + toadd1 = ' '*(len(partstr)-1) + power + if ((len(line2) + len(toadd2) > wrap) or + (len(line1) + len(toadd1) > wrap)): + output += line1 + "\n" + line2 + "\n " + line1 = toadd1 + line2 = toadd2 + else: + line2 += partstr + ' '*(len(power)-1) + line1 += ' '*(len(partstr)-1) + power + output += line1 + "\n" + line2 + return output + astr[n:] + + +@set_module('numpy') +class poly1d: + """ + A one-dimensional polynomial class. + + .. note:: + This forms part of the old polynomial API. Since version 1.4, the + new polynomial API defined in `numpy.polynomial` is preferred. + A summary of the differences can be found in the + :doc:`transition guide `. + + A convenience class, used to encapsulate "natural" operations on + polynomials so that said operations may take on their customary + form in code (see Examples). + + Parameters + ---------- + c_or_r : array_like + The polynomial's coefficients, in decreasing powers, or if + the value of the second parameter is True, the polynomial's + roots (values where the polynomial evaluates to 0). For example, + ``poly1d([1, 2, 3])`` returns an object that represents + :math:`x^2 + 2x + 3`, whereas ``poly1d([1, 2, 3], True)`` returns + one that represents :math:`(x-1)(x-2)(x-3) = x^3 - 6x^2 + 11x -6`. + r : bool, optional + If True, `c_or_r` specifies the polynomial's roots; the default + is False. + variable : str, optional + Changes the variable used when printing `p` from `x` to `variable` + (see Examples). + + Examples + -------- + Construct the polynomial :math:`x^2 + 2x + 3`: + + >>> p = np.poly1d([1, 2, 3]) + >>> print(np.poly1d(p)) + 2 + 1 x + 2 x + 3 + + Evaluate the polynomial at :math:`x = 0.5`: + + >>> p(0.5) + 4.25 + + Find the roots: + + >>> p.r + array([-1.+1.41421356j, -1.-1.41421356j]) + >>> p(p.r) + array([ -4.44089210e-16+0.j, -4.44089210e-16+0.j]) # may vary + + These numbers in the previous line represent (0, 0) to machine precision + + Show the coefficients: + + >>> p.c + array([1, 2, 3]) + + Display the order (the leading zero-coefficients are removed): + + >>> p.order + 2 + + Show the coefficient of the k-th power in the polynomial + (which is equivalent to ``p.c[-(i+1)]``): + + >>> p[1] + 2 + + Polynomials can be added, subtracted, multiplied, and divided + (returns quotient and remainder): + + >>> p * p + poly1d([ 1, 4, 10, 12, 9]) + + >>> (p**3 + 4) / p + (poly1d([ 1., 4., 10., 12., 9.]), poly1d([4.])) + + ``asarray(p)`` gives the coefficient array, so polynomials can be + used in all functions that accept arrays: + + >>> p**2 # square of polynomial + poly1d([ 1, 4, 10, 12, 9]) + + >>> np.square(p) # square of individual coefficients + array([1, 4, 9]) + + The variable used in the string representation of `p` can be modified, + using the `variable` parameter: + + >>> p = np.poly1d([1,2,3], variable='z') + >>> print(p) + 2 + 1 z + 2 z + 3 + + Construct a polynomial from its roots: + + >>> np.poly1d([1, 2], True) + poly1d([ 1., -3., 2.]) + + This is the same polynomial as obtained by: + + >>> np.poly1d([1, -1]) * np.poly1d([1, -2]) + poly1d([ 1, -3, 2]) + + """ + __hash__ = None + + @property + def coeffs(self): + """ The polynomial coefficients """ + return self._coeffs + + @coeffs.setter + def coeffs(self, value): + # allowing this makes p.coeffs *= 2 legal + if value is not self._coeffs: + raise AttributeError("Cannot set attribute") + + @property + def variable(self): + """ The name of the polynomial variable """ + return self._variable + + # calculated attributes + @property + def order(self): + """ The order or degree of the polynomial """ + return len(self._coeffs) - 1 + + @property + def roots(self): + """ The roots of the polynomial, where self(x) == 0 """ + return roots(self._coeffs) + + # our internal _coeffs property need to be backed by __dict__['coeffs'] for + # scipy to work correctly. + @property + def _coeffs(self): + return self.__dict__['coeffs'] + @_coeffs.setter + def _coeffs(self, coeffs): + self.__dict__['coeffs'] = coeffs + + # alias attributes + r = roots + c = coef = coefficients = coeffs + o = order + + def __init__(self, c_or_r, r=False, variable=None): + if isinstance(c_or_r, poly1d): + self._variable = c_or_r._variable + self._coeffs = c_or_r._coeffs + + if set(c_or_r.__dict__) - set(self.__dict__): + msg = ("In the future extra properties will not be copied " + "across when constructing one poly1d from another") + warnings.warn(msg, FutureWarning, stacklevel=2) + self.__dict__.update(c_or_r.__dict__) + + if variable is not None: + self._variable = variable + return + if r: + c_or_r = poly(c_or_r) + c_or_r = atleast_1d(c_or_r) + if c_or_r.ndim > 1: + raise ValueError("Polynomial must be 1d only.") + c_or_r = trim_zeros(c_or_r, trim='f') + if len(c_or_r) == 0: + c_or_r = NX.array([0], dtype=c_or_r.dtype) + self._coeffs = c_or_r + if variable is None: + variable = 'x' + self._variable = variable + + def __array__(self, t=None, copy=None): + if t: + return NX.asarray(self.coeffs, t, copy=copy) + else: + return NX.asarray(self.coeffs, copy=copy) + + def __repr__(self): + vals = repr(self.coeffs) + vals = vals[6:-1] + return "poly1d(%s)" % vals + + def __len__(self): + return self.order + + def __str__(self): + thestr = "0" + var = self.variable + + # Remove leading zeros + coeffs = self.coeffs[NX.logical_or.accumulate(self.coeffs != 0)] + N = len(coeffs)-1 + + def fmt_float(q): + s = '%.4g' % q + if s.endswith('.0000'): + s = s[:-5] + return s + + for k, coeff in enumerate(coeffs): + if not iscomplex(coeff): + coefstr = fmt_float(real(coeff)) + elif real(coeff) == 0: + coefstr = '%sj' % fmt_float(imag(coeff)) + else: + coefstr = '(%s + %sj)' % (fmt_float(real(coeff)), + fmt_float(imag(coeff))) + + power = (N-k) + if power == 0: + if coefstr != '0': + newstr = '%s' % (coefstr,) + else: + if k == 0: + newstr = '0' + else: + newstr = '' + elif power == 1: + if coefstr == '0': + newstr = '' + elif coefstr == 'b': + newstr = var + else: + newstr = '%s %s' % (coefstr, var) + else: + if coefstr == '0': + newstr = '' + elif coefstr == 'b': + newstr = '%s**%d' % (var, power,) + else: + newstr = '%s %s**%d' % (coefstr, var, power) + + if k > 0: + if newstr != '': + if newstr.startswith('-'): + thestr = "%s - %s" % (thestr, newstr[1:]) + else: + thestr = "%s + %s" % (thestr, newstr) + else: + thestr = newstr + return _raise_power(thestr) + + def __call__(self, val): + return polyval(self.coeffs, val) + + def __neg__(self): + return poly1d(-self.coeffs) + + def __pos__(self): + return self + + def __mul__(self, other): + if isscalar(other): + return poly1d(self.coeffs * other) + else: + other = poly1d(other) + return poly1d(polymul(self.coeffs, other.coeffs)) + + def __rmul__(self, other): + if isscalar(other): + return poly1d(other * self.coeffs) + else: + other = poly1d(other) + return poly1d(polymul(self.coeffs, other.coeffs)) + + def __add__(self, other): + other = poly1d(other) + return poly1d(polyadd(self.coeffs, other.coeffs)) + + def __radd__(self, other): + other = poly1d(other) + return poly1d(polyadd(self.coeffs, other.coeffs)) + + def __pow__(self, val): + if not isscalar(val) or int(val) != val or val < 0: + raise ValueError("Power to non-negative integers only.") + res = [1] + for _ in range(val): + res = polymul(self.coeffs, res) + return poly1d(res) + + def __sub__(self, other): + other = poly1d(other) + return poly1d(polysub(self.coeffs, other.coeffs)) + + def __rsub__(self, other): + other = poly1d(other) + return poly1d(polysub(other.coeffs, self.coeffs)) + + def __div__(self, other): + if isscalar(other): + return poly1d(self.coeffs/other) + else: + other = poly1d(other) + return polydiv(self, other) + + __truediv__ = __div__ + + def __rdiv__(self, other): + if isscalar(other): + return poly1d(other/self.coeffs) + else: + other = poly1d(other) + return polydiv(other, self) + + __rtruediv__ = __rdiv__ + + def __eq__(self, other): + if not isinstance(other, poly1d): + return NotImplemented + if self.coeffs.shape != other.coeffs.shape: + return False + return (self.coeffs == other.coeffs).all() + + def __ne__(self, other): + if not isinstance(other, poly1d): + return NotImplemented + return not self.__eq__(other) + + + def __getitem__(self, val): + ind = self.order - val + if val > self.order: + return self.coeffs.dtype.type(0) + if val < 0: + return self.coeffs.dtype.type(0) + return self.coeffs[ind] + + def __setitem__(self, key, val): + ind = self.order - key + if key < 0: + raise ValueError("Does not support negative powers.") + if key > self.order: + zr = NX.zeros(key-self.order, self.coeffs.dtype) + self._coeffs = NX.concatenate((zr, self.coeffs)) + ind = 0 + self._coeffs[ind] = val + return + + def __iter__(self): + return iter(self.coeffs) + + def integ(self, m=1, k=0): + """ + Return an antiderivative (indefinite integral) of this polynomial. + + Refer to `polyint` for full documentation. + + See Also + -------- + polyint : equivalent function + + """ + return poly1d(polyint(self.coeffs, m=m, k=k)) + + def deriv(self, m=1): + """ + Return a derivative of this polynomial. + + Refer to `polyder` for full documentation. + + See Also + -------- + polyder : equivalent function + + """ + return poly1d(polyder(self.coeffs, m=m)) + +# Stuff to do on module import + +warnings.simplefilter('always', RankWarning) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_polynomial_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_polynomial_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..123f32049939198bb124ff8dd5e95374d95ae652 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_polynomial_impl.pyi @@ -0,0 +1,302 @@ +from typing import ( + Literal as L, + overload, + Any, + SupportsInt, + SupportsIndex, + TypeVar, + NoReturn, +) + +import numpy as np +from numpy import ( + poly1d as poly1d, + unsignedinteger, + signedinteger, + floating, + complexfloating, + int32, + int64, + float64, + complex128, + object_, +) + +from numpy._typing import ( + NDArray, + ArrayLike, + _ArrayLikeBool_co, + _ArrayLikeUInt_co, + _ArrayLikeInt_co, + _ArrayLikeFloat_co, + _ArrayLikeComplex_co, + _ArrayLikeObject_co, +) + +_T = TypeVar("_T") + +_2Tup = tuple[_T, _T] +_5Tup = tuple[ + _T, + NDArray[float64], + NDArray[int32], + NDArray[float64], + NDArray[float64], +] + +__all__: list[str] + +def poly(seq_of_zeros: ArrayLike) -> NDArray[floating[Any]]: ... + +# Returns either a float or complex array depending on the input values. +# See `np.linalg.eigvals`. +def roots(p: ArrayLike) -> NDArray[complexfloating[Any, Any]] | NDArray[floating[Any]]: ... + +@overload +def polyint( + p: poly1d, + m: SupportsInt | SupportsIndex = ..., + k: None | _ArrayLikeComplex_co | _ArrayLikeObject_co = ..., +) -> poly1d: ... +@overload +def polyint( + p: _ArrayLikeFloat_co, + m: SupportsInt | SupportsIndex = ..., + k: None | _ArrayLikeFloat_co = ..., +) -> NDArray[floating[Any]]: ... +@overload +def polyint( + p: _ArrayLikeComplex_co, + m: SupportsInt | SupportsIndex = ..., + k: None | _ArrayLikeComplex_co = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def polyint( + p: _ArrayLikeObject_co, + m: SupportsInt | SupportsIndex = ..., + k: None | _ArrayLikeObject_co = ..., +) -> NDArray[object_]: ... + +@overload +def polyder( + p: poly1d, + m: SupportsInt | SupportsIndex = ..., +) -> poly1d: ... +@overload +def polyder( + p: _ArrayLikeFloat_co, + m: SupportsInt | SupportsIndex = ..., +) -> NDArray[floating[Any]]: ... +@overload +def polyder( + p: _ArrayLikeComplex_co, + m: SupportsInt | SupportsIndex = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def polyder( + p: _ArrayLikeObject_co, + m: SupportsInt | SupportsIndex = ..., +) -> NDArray[object_]: ... + +@overload +def polyfit( + x: _ArrayLikeFloat_co, + y: _ArrayLikeFloat_co, + deg: SupportsIndex | SupportsInt, + rcond: None | float = ..., + full: L[False] = ..., + w: None | _ArrayLikeFloat_co = ..., + cov: L[False] = ..., +) -> NDArray[float64]: ... +@overload +def polyfit( + x: _ArrayLikeComplex_co, + y: _ArrayLikeComplex_co, + deg: SupportsIndex | SupportsInt, + rcond: None | float = ..., + full: L[False] = ..., + w: None | _ArrayLikeFloat_co = ..., + cov: L[False] = ..., +) -> NDArray[complex128]: ... +@overload +def polyfit( + x: _ArrayLikeFloat_co, + y: _ArrayLikeFloat_co, + deg: SupportsIndex | SupportsInt, + rcond: None | float = ..., + full: L[False] = ..., + w: None | _ArrayLikeFloat_co = ..., + cov: L[True, "unscaled"] = ..., +) -> _2Tup[NDArray[float64]]: ... +@overload +def polyfit( + x: _ArrayLikeComplex_co, + y: _ArrayLikeComplex_co, + deg: SupportsIndex | SupportsInt, + rcond: None | float = ..., + full: L[False] = ..., + w: None | _ArrayLikeFloat_co = ..., + cov: L[True, "unscaled"] = ..., +) -> _2Tup[NDArray[complex128]]: ... +@overload +def polyfit( + x: _ArrayLikeFloat_co, + y: _ArrayLikeFloat_co, + deg: SupportsIndex | SupportsInt, + rcond: None | float = ..., + full: L[True] = ..., + w: None | _ArrayLikeFloat_co = ..., + cov: bool | L["unscaled"] = ..., +) -> _5Tup[NDArray[float64]]: ... +@overload +def polyfit( + x: _ArrayLikeComplex_co, + y: _ArrayLikeComplex_co, + deg: SupportsIndex | SupportsInt, + rcond: None | float = ..., + full: L[True] = ..., + w: None | _ArrayLikeFloat_co = ..., + cov: bool | L["unscaled"] = ..., +) -> _5Tup[NDArray[complex128]]: ... + +@overload +def polyval( + p: _ArrayLikeBool_co, + x: _ArrayLikeBool_co, +) -> NDArray[int64]: ... +@overload +def polyval( + p: _ArrayLikeUInt_co, + x: _ArrayLikeUInt_co, +) -> NDArray[unsignedinteger[Any]]: ... +@overload +def polyval( + p: _ArrayLikeInt_co, + x: _ArrayLikeInt_co, +) -> NDArray[signedinteger[Any]]: ... +@overload +def polyval( + p: _ArrayLikeFloat_co, + x: _ArrayLikeFloat_co, +) -> NDArray[floating[Any]]: ... +@overload +def polyval( + p: _ArrayLikeComplex_co, + x: _ArrayLikeComplex_co, +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def polyval( + p: _ArrayLikeObject_co, + x: _ArrayLikeObject_co, +) -> NDArray[object_]: ... + +@overload +def polyadd( + a1: poly1d, + a2: _ArrayLikeComplex_co | _ArrayLikeObject_co, +) -> poly1d: ... +@overload +def polyadd( + a1: _ArrayLikeComplex_co | _ArrayLikeObject_co, + a2: poly1d, +) -> poly1d: ... +@overload +def polyadd( + a1: _ArrayLikeBool_co, + a2: _ArrayLikeBool_co, +) -> NDArray[np.bool]: ... +@overload +def polyadd( + a1: _ArrayLikeUInt_co, + a2: _ArrayLikeUInt_co, +) -> NDArray[unsignedinteger[Any]]: ... +@overload +def polyadd( + a1: _ArrayLikeInt_co, + a2: _ArrayLikeInt_co, +) -> NDArray[signedinteger[Any]]: ... +@overload +def polyadd( + a1: _ArrayLikeFloat_co, + a2: _ArrayLikeFloat_co, +) -> NDArray[floating[Any]]: ... +@overload +def polyadd( + a1: _ArrayLikeComplex_co, + a2: _ArrayLikeComplex_co, +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def polyadd( + a1: _ArrayLikeObject_co, + a2: _ArrayLikeObject_co, +) -> NDArray[object_]: ... + +@overload +def polysub( + a1: poly1d, + a2: _ArrayLikeComplex_co | _ArrayLikeObject_co, +) -> poly1d: ... +@overload +def polysub( + a1: _ArrayLikeComplex_co | _ArrayLikeObject_co, + a2: poly1d, +) -> poly1d: ... +@overload +def polysub( + a1: _ArrayLikeBool_co, + a2: _ArrayLikeBool_co, +) -> NoReturn: ... +@overload +def polysub( + a1: _ArrayLikeUInt_co, + a2: _ArrayLikeUInt_co, +) -> NDArray[unsignedinteger[Any]]: ... +@overload +def polysub( + a1: _ArrayLikeInt_co, + a2: _ArrayLikeInt_co, +) -> NDArray[signedinteger[Any]]: ... +@overload +def polysub( + a1: _ArrayLikeFloat_co, + a2: _ArrayLikeFloat_co, +) -> NDArray[floating[Any]]: ... +@overload +def polysub( + a1: _ArrayLikeComplex_co, + a2: _ArrayLikeComplex_co, +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def polysub( + a1: _ArrayLikeObject_co, + a2: _ArrayLikeObject_co, +) -> NDArray[object_]: ... + +# NOTE: Not an alias, but they do have the same signature (that we can reuse) +polymul = polyadd + +@overload +def polydiv( + u: poly1d, + v: _ArrayLikeComplex_co | _ArrayLikeObject_co, +) -> _2Tup[poly1d]: ... +@overload +def polydiv( + u: _ArrayLikeComplex_co | _ArrayLikeObject_co, + v: poly1d, +) -> _2Tup[poly1d]: ... +@overload +def polydiv( + u: _ArrayLikeFloat_co, + v: _ArrayLikeFloat_co, +) -> _2Tup[NDArray[floating[Any]]]: ... +@overload +def polydiv( + u: _ArrayLikeComplex_co, + v: _ArrayLikeComplex_co, +) -> _2Tup[NDArray[complexfloating[Any, Any]]]: ... +@overload +def polydiv( + u: _ArrayLikeObject_co, + v: _ArrayLikeObject_co, +) -> _2Tup[NDArray[Any]]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_scimath_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_scimath_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..43682fefee1723511bdedde02d17aeb37e418da9 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_scimath_impl.py @@ -0,0 +1,636 @@ +""" +Wrapper functions to more user-friendly calling of certain math functions +whose output data-type is different than the input data-type in certain +domains of the input. + +For example, for functions like `log` with branch cuts, the versions in this +module provide the mathematically valid answers in the complex plane:: + + >>> import math + >>> np.emath.log(-math.exp(1)) == (1+1j*math.pi) + True + +Similarly, `sqrt`, other base logarithms, `power` and trig functions are +correctly handled. See their respective docstrings for specific examples. + +Functions +--------- + +.. autosummary:: + :toctree: generated/ + + sqrt + log + log2 + logn + log10 + power + arccos + arcsin + arctanh + +""" +import numpy._core.numeric as nx +import numpy._core.numerictypes as nt +from numpy._core.numeric import asarray, any +from numpy._core.overrides import array_function_dispatch +from numpy.lib._type_check_impl import isreal + + +__all__ = [ + 'sqrt', 'log', 'log2', 'logn', 'log10', 'power', 'arccos', 'arcsin', + 'arctanh' + ] + + +_ln2 = nx.log(2.0) + + +def _tocomplex(arr): + """Convert its input `arr` to a complex array. + + The input is returned as a complex array of the smallest type that will fit + the original data: types like single, byte, short, etc. become csingle, + while others become cdouble. + + A copy of the input is always made. + + Parameters + ---------- + arr : array + + Returns + ------- + array + An array with the same input data as the input but in complex form. + + Examples + -------- + + First, consider an input of type short: + + >>> a = np.array([1,2,3],np.short) + + >>> ac = np.lib.scimath._tocomplex(a); ac + array([1.+0.j, 2.+0.j, 3.+0.j], dtype=complex64) + + >>> ac.dtype + dtype('complex64') + + If the input is of type double, the output is correspondingly of the + complex double type as well: + + >>> b = np.array([1,2,3],np.double) + + >>> bc = np.lib.scimath._tocomplex(b); bc + array([1.+0.j, 2.+0.j, 3.+0.j]) + + >>> bc.dtype + dtype('complex128') + + Note that even if the input was complex to begin with, a copy is still + made, since the astype() method always copies: + + >>> c = np.array([1,2,3],np.csingle) + + >>> cc = np.lib.scimath._tocomplex(c); cc + array([1.+0.j, 2.+0.j, 3.+0.j], dtype=complex64) + + >>> c *= 2; c + array([2.+0.j, 4.+0.j, 6.+0.j], dtype=complex64) + + >>> cc + array([1.+0.j, 2.+0.j, 3.+0.j], dtype=complex64) + """ + if issubclass(arr.dtype.type, (nt.single, nt.byte, nt.short, nt.ubyte, + nt.ushort, nt.csingle)): + return arr.astype(nt.csingle) + else: + return arr.astype(nt.cdouble) + + +def _fix_real_lt_zero(x): + """Convert `x` to complex if it has real, negative components. + + Otherwise, output is just the array version of the input (via asarray). + + Parameters + ---------- + x : array_like + + Returns + ------- + array + + Examples + -------- + >>> np.lib.scimath._fix_real_lt_zero([1,2]) + array([1, 2]) + + >>> np.lib.scimath._fix_real_lt_zero([-1,2]) + array([-1.+0.j, 2.+0.j]) + + """ + x = asarray(x) + if any(isreal(x) & (x < 0)): + x = _tocomplex(x) + return x + + +def _fix_int_lt_zero(x): + """Convert `x` to double if it has real, negative components. + + Otherwise, output is just the array version of the input (via asarray). + + Parameters + ---------- + x : array_like + + Returns + ------- + array + + Examples + -------- + >>> np.lib.scimath._fix_int_lt_zero([1,2]) + array([1, 2]) + + >>> np.lib.scimath._fix_int_lt_zero([-1,2]) + array([-1., 2.]) + """ + x = asarray(x) + if any(isreal(x) & (x < 0)): + x = x * 1.0 + return x + + +def _fix_real_abs_gt_1(x): + """Convert `x` to complex if it has real components x_i with abs(x_i)>1. + + Otherwise, output is just the array version of the input (via asarray). + + Parameters + ---------- + x : array_like + + Returns + ------- + array + + Examples + -------- + >>> np.lib.scimath._fix_real_abs_gt_1([0,1]) + array([0, 1]) + + >>> np.lib.scimath._fix_real_abs_gt_1([0,2]) + array([0.+0.j, 2.+0.j]) + """ + x = asarray(x) + if any(isreal(x) & (abs(x) > 1)): + x = _tocomplex(x) + return x + + +def _unary_dispatcher(x): + return (x,) + + +@array_function_dispatch(_unary_dispatcher) +def sqrt(x): + """ + Compute the square root of x. + + For negative input elements, a complex value is returned + (unlike `numpy.sqrt` which returns NaN). + + Parameters + ---------- + x : array_like + The input value(s). + + Returns + ------- + out : ndarray or scalar + The square root of `x`. If `x` was a scalar, so is `out`, + otherwise an array is returned. + + See Also + -------- + numpy.sqrt + + Examples + -------- + For real, non-negative inputs this works just like `numpy.sqrt`: + + >>> np.emath.sqrt(1) + 1.0 + >>> np.emath.sqrt([1, 4]) + array([1., 2.]) + + But it automatically handles negative inputs: + + >>> np.emath.sqrt(-1) + 1j + >>> np.emath.sqrt([-1,4]) + array([0.+1.j, 2.+0.j]) + + Different results are expected because: + floating point 0.0 and -0.0 are distinct. + + For more control, explicitly use complex() as follows: + + >>> np.emath.sqrt(complex(-4.0, 0.0)) + 2j + >>> np.emath.sqrt(complex(-4.0, -0.0)) + -2j + """ + x = _fix_real_lt_zero(x) + return nx.sqrt(x) + + +@array_function_dispatch(_unary_dispatcher) +def log(x): + """ + Compute the natural logarithm of `x`. + + Return the "principal value" (for a description of this, see `numpy.log`) + of :math:`log_e(x)`. For real `x > 0`, this is a real number (``log(0)`` + returns ``-inf`` and ``log(np.inf)`` returns ``inf``). Otherwise, the + complex principle value is returned. + + Parameters + ---------- + x : array_like + The value(s) whose log is (are) required. + + Returns + ------- + out : ndarray or scalar + The log of the `x` value(s). If `x` was a scalar, so is `out`, + otherwise an array is returned. + + See Also + -------- + numpy.log + + Notes + ----- + For a log() that returns ``NAN`` when real `x < 0`, use `numpy.log` + (note, however, that otherwise `numpy.log` and this `log` are identical, + i.e., both return ``-inf`` for `x = 0`, ``inf`` for `x = inf`, and, + notably, the complex principle value if ``x.imag != 0``). + + Examples + -------- + >>> np.emath.log(np.exp(1)) + 1.0 + + Negative arguments are handled "correctly" (recall that + ``exp(log(x)) == x`` does *not* hold for real ``x < 0``): + + >>> np.emath.log(-np.exp(1)) == (1 + np.pi * 1j) + True + + """ + x = _fix_real_lt_zero(x) + return nx.log(x) + + +@array_function_dispatch(_unary_dispatcher) +def log10(x): + """ + Compute the logarithm base 10 of `x`. + + Return the "principal value" (for a description of this, see + `numpy.log10`) of :math:`log_{10}(x)`. For real `x > 0`, this + is a real number (``log10(0)`` returns ``-inf`` and ``log10(np.inf)`` + returns ``inf``). Otherwise, the complex principle value is returned. + + Parameters + ---------- + x : array_like or scalar + The value(s) whose log base 10 is (are) required. + + Returns + ------- + out : ndarray or scalar + The log base 10 of the `x` value(s). If `x` was a scalar, so is `out`, + otherwise an array object is returned. + + See Also + -------- + numpy.log10 + + Notes + ----- + For a log10() that returns ``NAN`` when real `x < 0`, use `numpy.log10` + (note, however, that otherwise `numpy.log10` and this `log10` are + identical, i.e., both return ``-inf`` for `x = 0`, ``inf`` for `x = inf`, + and, notably, the complex principle value if ``x.imag != 0``). + + Examples + -------- + + (We set the printing precision so the example can be auto-tested) + + >>> np.set_printoptions(precision=4) + + >>> np.emath.log10(10**1) + 1.0 + + >>> np.emath.log10([-10**1, -10**2, 10**2]) + array([1.+1.3644j, 2.+1.3644j, 2.+0.j ]) + + """ + x = _fix_real_lt_zero(x) + return nx.log10(x) + + +def _logn_dispatcher(n, x): + return (n, x,) + + +@array_function_dispatch(_logn_dispatcher) +def logn(n, x): + """ + Take log base n of x. + + If `x` contains negative inputs, the answer is computed and returned in the + complex domain. + + Parameters + ---------- + n : array_like + The integer base(s) in which the log is taken. + x : array_like + The value(s) whose log base `n` is (are) required. + + Returns + ------- + out : ndarray or scalar + The log base `n` of the `x` value(s). If `x` was a scalar, so is + `out`, otherwise an array is returned. + + Examples + -------- + >>> np.set_printoptions(precision=4) + + >>> np.emath.logn(2, [4, 8]) + array([2., 3.]) + >>> np.emath.logn(2, [-4, -8, 8]) + array([2.+4.5324j, 3.+4.5324j, 3.+0.j ]) + + """ + x = _fix_real_lt_zero(x) + n = _fix_real_lt_zero(n) + return nx.log(x)/nx.log(n) + + +@array_function_dispatch(_unary_dispatcher) +def log2(x): + """ + Compute the logarithm base 2 of `x`. + + Return the "principal value" (for a description of this, see + `numpy.log2`) of :math:`log_2(x)`. For real `x > 0`, this is + a real number (``log2(0)`` returns ``-inf`` and ``log2(np.inf)`` returns + ``inf``). Otherwise, the complex principle value is returned. + + Parameters + ---------- + x : array_like + The value(s) whose log base 2 is (are) required. + + Returns + ------- + out : ndarray or scalar + The log base 2 of the `x` value(s). If `x` was a scalar, so is `out`, + otherwise an array is returned. + + See Also + -------- + numpy.log2 + + Notes + ----- + For a log2() that returns ``NAN`` when real `x < 0`, use `numpy.log2` + (note, however, that otherwise `numpy.log2` and this `log2` are + identical, i.e., both return ``-inf`` for `x = 0`, ``inf`` for `x = inf`, + and, notably, the complex principle value if ``x.imag != 0``). + + Examples + -------- + We set the printing precision so the example can be auto-tested: + + >>> np.set_printoptions(precision=4) + + >>> np.emath.log2(8) + 3.0 + >>> np.emath.log2([-4, -8, 8]) + array([2.+4.5324j, 3.+4.5324j, 3.+0.j ]) + + """ + x = _fix_real_lt_zero(x) + return nx.log2(x) + + +def _power_dispatcher(x, p): + return (x, p) + + +@array_function_dispatch(_power_dispatcher) +def power(x, p): + """ + Return x to the power p, (x**p). + + If `x` contains negative values, the output is converted to the + complex domain. + + Parameters + ---------- + x : array_like + The input value(s). + p : array_like of ints + The power(s) to which `x` is raised. If `x` contains multiple values, + `p` has to either be a scalar, or contain the same number of values + as `x`. In the latter case, the result is + ``x[0]**p[0], x[1]**p[1], ...``. + + Returns + ------- + out : ndarray or scalar + The result of ``x**p``. If `x` and `p` are scalars, so is `out`, + otherwise an array is returned. + + See Also + -------- + numpy.power + + Examples + -------- + >>> np.set_printoptions(precision=4) + + >>> np.emath.power(2, 2) + 4 + + >>> np.emath.power([2, 4], 2) + array([ 4, 16]) + + >>> np.emath.power([2, 4], -2) + array([0.25 , 0.0625]) + + >>> np.emath.power([-2, 4], 2) + array([ 4.-0.j, 16.+0.j]) + + >>> np.emath.power([2, 4], [2, 4]) + array([ 4, 256]) + + """ + x = _fix_real_lt_zero(x) + p = _fix_int_lt_zero(p) + return nx.power(x, p) + + +@array_function_dispatch(_unary_dispatcher) +def arccos(x): + """ + Compute the inverse cosine of x. + + Return the "principal value" (for a description of this, see + `numpy.arccos`) of the inverse cosine of `x`. For real `x` such that + `abs(x) <= 1`, this is a real number in the closed interval + :math:`[0, \\pi]`. Otherwise, the complex principle value is returned. + + Parameters + ---------- + x : array_like or scalar + The value(s) whose arccos is (are) required. + + Returns + ------- + out : ndarray or scalar + The inverse cosine(s) of the `x` value(s). If `x` was a scalar, so + is `out`, otherwise an array object is returned. + + See Also + -------- + numpy.arccos + + Notes + ----- + For an arccos() that returns ``NAN`` when real `x` is not in the + interval ``[-1,1]``, use `numpy.arccos`. + + Examples + -------- + >>> np.set_printoptions(precision=4) + + >>> np.emath.arccos(1) # a scalar is returned + 0.0 + + >>> np.emath.arccos([1,2]) + array([0.-0.j , 0.-1.317j]) + + """ + x = _fix_real_abs_gt_1(x) + return nx.arccos(x) + + +@array_function_dispatch(_unary_dispatcher) +def arcsin(x): + """ + Compute the inverse sine of x. + + Return the "principal value" (for a description of this, see + `numpy.arcsin`) of the inverse sine of `x`. For real `x` such that + `abs(x) <= 1`, this is a real number in the closed interval + :math:`[-\\pi/2, \\pi/2]`. Otherwise, the complex principle value is + returned. + + Parameters + ---------- + x : array_like or scalar + The value(s) whose arcsin is (are) required. + + Returns + ------- + out : ndarray or scalar + The inverse sine(s) of the `x` value(s). If `x` was a scalar, so + is `out`, otherwise an array object is returned. + + See Also + -------- + numpy.arcsin + + Notes + ----- + For an arcsin() that returns ``NAN`` when real `x` is not in the + interval ``[-1,1]``, use `numpy.arcsin`. + + Examples + -------- + >>> np.set_printoptions(precision=4) + + >>> np.emath.arcsin(0) + 0.0 + + >>> np.emath.arcsin([0,1]) + array([0. , 1.5708]) + + """ + x = _fix_real_abs_gt_1(x) + return nx.arcsin(x) + + +@array_function_dispatch(_unary_dispatcher) +def arctanh(x): + """ + Compute the inverse hyperbolic tangent of `x`. + + Return the "principal value" (for a description of this, see + `numpy.arctanh`) of ``arctanh(x)``. For real `x` such that + ``abs(x) < 1``, this is a real number. If `abs(x) > 1`, or if `x` is + complex, the result is complex. Finally, `x = 1` returns``inf`` and + ``x=-1`` returns ``-inf``. + + Parameters + ---------- + x : array_like + The value(s) whose arctanh is (are) required. + + Returns + ------- + out : ndarray or scalar + The inverse hyperbolic tangent(s) of the `x` value(s). If `x` was + a scalar so is `out`, otherwise an array is returned. + + + See Also + -------- + numpy.arctanh + + Notes + ----- + For an arctanh() that returns ``NAN`` when real `x` is not in the + interval ``(-1,1)``, use `numpy.arctanh` (this latter, however, does + return +/-inf for ``x = +/-1``). + + Examples + -------- + >>> np.set_printoptions(precision=4) + + >>> np.emath.arctanh(0.5) + 0.5493061443340549 + + >>> from numpy.testing import suppress_warnings + >>> with suppress_warnings() as sup: + ... sup.filter(RuntimeWarning) + ... np.emath.arctanh(np.eye(2)) + array([[inf, 0.], + [ 0., inf]]) + >>> np.emath.arctanh([1j]) + array([0.+0.7854j]) + + """ + x = _fix_real_abs_gt_1(x) + return nx.arctanh(x) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_scimath_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_scimath_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..589feb15f8ff38bc5003928f6d934454c8e2a94d --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_scimath_impl.pyi @@ -0,0 +1,94 @@ +from typing import overload, Any + +from numpy import complexfloating + +from numpy._typing import ( + NDArray, + _ArrayLikeFloat_co, + _ArrayLikeComplex_co, + _ComplexLike_co, + _FloatLike_co, +) + +__all__: list[str] + +@overload +def sqrt(x: _FloatLike_co) -> Any: ... +@overload +def sqrt(x: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def sqrt(x: _ArrayLikeFloat_co) -> NDArray[Any]: ... +@overload +def sqrt(x: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def log(x: _FloatLike_co) -> Any: ... +@overload +def log(x: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def log(x: _ArrayLikeFloat_co) -> NDArray[Any]: ... +@overload +def log(x: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def log10(x: _FloatLike_co) -> Any: ... +@overload +def log10(x: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def log10(x: _ArrayLikeFloat_co) -> NDArray[Any]: ... +@overload +def log10(x: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def log2(x: _FloatLike_co) -> Any: ... +@overload +def log2(x: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def log2(x: _ArrayLikeFloat_co) -> NDArray[Any]: ... +@overload +def log2(x: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def logn(n: _FloatLike_co, x: _FloatLike_co) -> Any: ... +@overload +def logn(n: _ComplexLike_co, x: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def logn(n: _ArrayLikeFloat_co, x: _ArrayLikeFloat_co) -> NDArray[Any]: ... +@overload +def logn(n: _ArrayLikeComplex_co, x: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def power(x: _FloatLike_co, p: _FloatLike_co) -> Any: ... +@overload +def power(x: _ComplexLike_co, p: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def power(x: _ArrayLikeFloat_co, p: _ArrayLikeFloat_co) -> NDArray[Any]: ... +@overload +def power(x: _ArrayLikeComplex_co, p: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def arccos(x: _FloatLike_co) -> Any: ... +@overload +def arccos(x: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def arccos(x: _ArrayLikeFloat_co) -> NDArray[Any]: ... +@overload +def arccos(x: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def arcsin(x: _FloatLike_co) -> Any: ... +@overload +def arcsin(x: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def arcsin(x: _ArrayLikeFloat_co) -> NDArray[Any]: ... +@overload +def arcsin(x: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... + +@overload +def arctanh(x: _FloatLike_co) -> Any: ... +@overload +def arctanh(x: _ComplexLike_co) -> complexfloating[Any, Any]: ... +@overload +def arctanh(x: _ArrayLikeFloat_co) -> NDArray[Any]: ... +@overload +def arctanh(x: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_shape_base_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_shape_base_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..68453095db7eb56c202a744555a989cab9a7c1a6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_shape_base_impl.py @@ -0,0 +1,1286 @@ +import functools +import warnings + +import numpy._core.numeric as _nx +from numpy._core.numeric import asarray, zeros, zeros_like, array, asanyarray +from numpy._core.fromnumeric import reshape, transpose +from numpy._core.multiarray import normalize_axis_index +from numpy._core._multiarray_umath import _array_converter +from numpy._core import overrides +from numpy._core import vstack, atleast_3d +from numpy._core.numeric import normalize_axis_tuple +from numpy._core.overrides import set_module +from numpy._core.shape_base import _arrays_for_stack_dispatcher +from numpy.lib._index_tricks_impl import ndindex +from numpy.matrixlib.defmatrix import matrix # this raises all the right alarm bells + + +__all__ = [ + 'column_stack', 'row_stack', 'dstack', 'array_split', 'split', + 'hsplit', 'vsplit', 'dsplit', 'apply_over_axes', 'expand_dims', + 'apply_along_axis', 'kron', 'tile', 'take_along_axis', + 'put_along_axis' + ] + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +def _make_along_axis_idx(arr_shape, indices, axis): + # compute dimensions to iterate over + if not _nx.issubdtype(indices.dtype, _nx.integer): + raise IndexError('`indices` must be an integer array') + if len(arr_shape) != indices.ndim: + raise ValueError( + "`indices` and `arr` must have the same number of dimensions") + shape_ones = (1,) * indices.ndim + dest_dims = list(range(axis)) + [None] + list(range(axis+1, indices.ndim)) + + # build a fancy index, consisting of orthogonal aranges, with the + # requested index inserted at the right location + fancy_index = [] + for dim, n in zip(dest_dims, arr_shape): + if dim is None: + fancy_index.append(indices) + else: + ind_shape = shape_ones[:dim] + (-1,) + shape_ones[dim+1:] + fancy_index.append(_nx.arange(n).reshape(ind_shape)) + + return tuple(fancy_index) + + +def _take_along_axis_dispatcher(arr, indices, axis): + return (arr, indices) + + +@array_function_dispatch(_take_along_axis_dispatcher) +def take_along_axis(arr, indices, axis): + """ + Take values from the input array by matching 1d index and data slices. + + This iterates over matching 1d slices oriented along the specified axis in + the index and data arrays, and uses the former to look up values in the + latter. These slices can be different lengths. + + Functions returning an index along an axis, like `argsort` and + `argpartition`, produce suitable indices for this function. + + .. versionadded:: 1.15.0 + + Parameters + ---------- + arr : ndarray (Ni..., M, Nk...) + Source array + indices : ndarray (Ni..., J, Nk...) + Indices to take along each 1d slice of `arr`. This must match the + dimension of arr, but dimensions Ni and Nj only need to broadcast + against `arr`. + axis : int + The axis to take 1d slices along. If axis is None, the input array is + treated as if it had first been flattened to 1d, for consistency with + `sort` and `argsort`. + + Returns + ------- + out: ndarray (Ni..., J, Nk...) + The indexed result. + + Notes + ----- + This is equivalent to (but faster than) the following use of `ndindex` and + `s_`, which sets each of ``ii`` and ``kk`` to a tuple of indices:: + + Ni, M, Nk = a.shape[:axis], a.shape[axis], a.shape[axis+1:] + J = indices.shape[axis] # Need not equal M + out = np.empty(Ni + (J,) + Nk) + + for ii in ndindex(Ni): + for kk in ndindex(Nk): + a_1d = a [ii + s_[:,] + kk] + indices_1d = indices[ii + s_[:,] + kk] + out_1d = out [ii + s_[:,] + kk] + for j in range(J): + out_1d[j] = a_1d[indices_1d[j]] + + Equivalently, eliminating the inner loop, the last two lines would be:: + + out_1d[:] = a_1d[indices_1d] + + See Also + -------- + take : Take along an axis, using the same indices for every 1d slice + put_along_axis : + Put values into the destination array by matching 1d index and data slices + + Examples + -------- + + For this sample array + + >>> a = np.array([[10, 30, 20], [60, 40, 50]]) + + We can sort either by using sort directly, or argsort and this function + + >>> np.sort(a, axis=1) + array([[10, 20, 30], + [40, 50, 60]]) + >>> ai = np.argsort(a, axis=1) + >>> ai + array([[0, 2, 1], + [1, 2, 0]]) + >>> np.take_along_axis(a, ai, axis=1) + array([[10, 20, 30], + [40, 50, 60]]) + + The same works for max and min, if you maintain the trivial dimension + with ``keepdims``: + + >>> np.max(a, axis=1, keepdims=True) + array([[30], + [60]]) + >>> ai = np.argmax(a, axis=1, keepdims=True) + >>> ai + array([[1], + [0]]) + >>> np.take_along_axis(a, ai, axis=1) + array([[30], + [60]]) + + If we want to get the max and min at the same time, we can stack the + indices first + + >>> ai_min = np.argmin(a, axis=1, keepdims=True) + >>> ai_max = np.argmax(a, axis=1, keepdims=True) + >>> ai = np.concatenate([ai_min, ai_max], axis=1) + >>> ai + array([[0, 1], + [1, 0]]) + >>> np.take_along_axis(a, ai, axis=1) + array([[10, 30], + [40, 60]]) + """ + # normalize inputs + if axis is None: + arr = arr.flat + arr_shape = (len(arr),) # flatiter has no .shape + axis = 0 + else: + axis = normalize_axis_index(axis, arr.ndim) + arr_shape = arr.shape + + # use the fancy index + return arr[_make_along_axis_idx(arr_shape, indices, axis)] + + +def _put_along_axis_dispatcher(arr, indices, values, axis): + return (arr, indices, values) + + +@array_function_dispatch(_put_along_axis_dispatcher) +def put_along_axis(arr, indices, values, axis): + """ + Put values into the destination array by matching 1d index and data slices. + + This iterates over matching 1d slices oriented along the specified axis in + the index and data arrays, and uses the former to place values into the + latter. These slices can be different lengths. + + Functions returning an index along an axis, like `argsort` and + `argpartition`, produce suitable indices for this function. + + .. versionadded:: 1.15.0 + + Parameters + ---------- + arr : ndarray (Ni..., M, Nk...) + Destination array. + indices : ndarray (Ni..., J, Nk...) + Indices to change along each 1d slice of `arr`. This must match the + dimension of arr, but dimensions in Ni and Nj may be 1 to broadcast + against `arr`. + values : array_like (Ni..., J, Nk...) + values to insert at those indices. Its shape and dimension are + broadcast to match that of `indices`. + axis : int + The axis to take 1d slices along. If axis is None, the destination + array is treated as if a flattened 1d view had been created of it. + + Notes + ----- + This is equivalent to (but faster than) the following use of `ndindex` and + `s_`, which sets each of ``ii`` and ``kk`` to a tuple of indices:: + + Ni, M, Nk = a.shape[:axis], a.shape[axis], a.shape[axis+1:] + J = indices.shape[axis] # Need not equal M + + for ii in ndindex(Ni): + for kk in ndindex(Nk): + a_1d = a [ii + s_[:,] + kk] + indices_1d = indices[ii + s_[:,] + kk] + values_1d = values [ii + s_[:,] + kk] + for j in range(J): + a_1d[indices_1d[j]] = values_1d[j] + + Equivalently, eliminating the inner loop, the last two lines would be:: + + a_1d[indices_1d] = values_1d + + See Also + -------- + take_along_axis : + Take values from the input array by matching 1d index and data slices + + Examples + -------- + + For this sample array + + >>> a = np.array([[10, 30, 20], [60, 40, 50]]) + + We can replace the maximum values with: + + >>> ai = np.argmax(a, axis=1, keepdims=True) + >>> ai + array([[1], + [0]]) + >>> np.put_along_axis(a, ai, 99, axis=1) + >>> a + array([[10, 99, 20], + [99, 40, 50]]) + + """ + # normalize inputs + if axis is None: + arr = arr.flat + axis = 0 + arr_shape = (len(arr),) # flatiter has no .shape + else: + axis = normalize_axis_index(axis, arr.ndim) + arr_shape = arr.shape + + # use the fancy index + arr[_make_along_axis_idx(arr_shape, indices, axis)] = values + + +def _apply_along_axis_dispatcher(func1d, axis, arr, *args, **kwargs): + return (arr,) + + +@array_function_dispatch(_apply_along_axis_dispatcher) +def apply_along_axis(func1d, axis, arr, *args, **kwargs): + """ + Apply a function to 1-D slices along the given axis. + + Execute `func1d(a, *args, **kwargs)` where `func1d` operates on 1-D arrays + and `a` is a 1-D slice of `arr` along `axis`. + + This is equivalent to (but faster than) the following use of `ndindex` and + `s_`, which sets each of ``ii``, ``jj``, and ``kk`` to a tuple of indices:: + + Ni, Nk = a.shape[:axis], a.shape[axis+1:] + for ii in ndindex(Ni): + for kk in ndindex(Nk): + f = func1d(arr[ii + s_[:,] + kk]) + Nj = f.shape + for jj in ndindex(Nj): + out[ii + jj + kk] = f[jj] + + Equivalently, eliminating the inner loop, this can be expressed as:: + + Ni, Nk = a.shape[:axis], a.shape[axis+1:] + for ii in ndindex(Ni): + for kk in ndindex(Nk): + out[ii + s_[...,] + kk] = func1d(arr[ii + s_[:,] + kk]) + + Parameters + ---------- + func1d : function (M,) -> (Nj...) + This function should accept 1-D arrays. It is applied to 1-D + slices of `arr` along the specified axis. + axis : integer + Axis along which `arr` is sliced. + arr : ndarray (Ni..., M, Nk...) + Input array. + args : any + Additional arguments to `func1d`. + kwargs : any + Additional named arguments to `func1d`. + + .. versionadded:: 1.9.0 + + + Returns + ------- + out : ndarray (Ni..., Nj..., Nk...) + The output array. The shape of `out` is identical to the shape of + `arr`, except along the `axis` dimension. This axis is removed, and + replaced with new dimensions equal to the shape of the return value + of `func1d`. So if `func1d` returns a scalar `out` will have one + fewer dimensions than `arr`. + + See Also + -------- + apply_over_axes : Apply a function repeatedly over multiple axes. + + Examples + -------- + >>> def my_func(a): + ... \"\"\"Average first and last element of a 1-D array\"\"\" + ... return (a[0] + a[-1]) * 0.5 + >>> b = np.array([[1,2,3], [4,5,6], [7,8,9]]) + >>> np.apply_along_axis(my_func, 0, b) + array([4., 5., 6.]) + >>> np.apply_along_axis(my_func, 1, b) + array([2., 5., 8.]) + + For a function that returns a 1D array, the number of dimensions in + `outarr` is the same as `arr`. + + >>> b = np.array([[8,1,7], [4,3,9], [5,2,6]]) + >>> np.apply_along_axis(sorted, 1, b) + array([[1, 7, 8], + [3, 4, 9], + [2, 5, 6]]) + + For a function that returns a higher dimensional array, those dimensions + are inserted in place of the `axis` dimension. + + >>> b = np.array([[1,2,3], [4,5,6], [7,8,9]]) + >>> np.apply_along_axis(np.diag, -1, b) + array([[[1, 0, 0], + [0, 2, 0], + [0, 0, 3]], + [[4, 0, 0], + [0, 5, 0], + [0, 0, 6]], + [[7, 0, 0], + [0, 8, 0], + [0, 0, 9]]]) + """ + # handle negative axes + conv = _array_converter(arr) + arr = conv[0] + + nd = arr.ndim + axis = normalize_axis_index(axis, nd) + + # arr, with the iteration axis at the end + in_dims = list(range(nd)) + inarr_view = transpose(arr, in_dims[:axis] + in_dims[axis+1:] + [axis]) + + # compute indices for the iteration axes, and append a trailing ellipsis to + # prevent 0d arrays decaying to scalars, which fixes gh-8642 + inds = ndindex(inarr_view.shape[:-1]) + inds = (ind + (Ellipsis,) for ind in inds) + + # invoke the function on the first item + try: + ind0 = next(inds) + except StopIteration: + raise ValueError( + 'Cannot apply_along_axis when any iteration dimensions are 0' + ) from None + res = asanyarray(func1d(inarr_view[ind0], *args, **kwargs)) + + # build a buffer for storing evaluations of func1d. + # remove the requested axis, and add the new ones on the end. + # laid out so that each write is contiguous. + # for a tuple index inds, buff[inds] = func1d(inarr_view[inds]) + if not isinstance(res, matrix): + buff = zeros_like(res, shape=inarr_view.shape[:-1] + res.shape) + else: + # Matrices are nasty with reshaping, so do not preserve them here. + buff = zeros(inarr_view.shape[:-1] + res.shape, dtype=res.dtype) + + # permutation of axes such that out = buff.transpose(buff_permute) + buff_dims = list(range(buff.ndim)) + buff_permute = ( + buff_dims[0 : axis] + + buff_dims[buff.ndim-res.ndim : buff.ndim] + + buff_dims[axis : buff.ndim-res.ndim] + ) + + # save the first result, then compute and save all remaining results + buff[ind0] = res + for ind in inds: + buff[ind] = asanyarray(func1d(inarr_view[ind], *args, **kwargs)) + + res = transpose(buff, buff_permute) + return conv.wrap(res) + + +def _apply_over_axes_dispatcher(func, a, axes): + return (a,) + + +@array_function_dispatch(_apply_over_axes_dispatcher) +def apply_over_axes(func, a, axes): + """ + Apply a function repeatedly over multiple axes. + + `func` is called as `res = func(a, axis)`, where `axis` is the first + element of `axes`. The result `res` of the function call must have + either the same dimensions as `a` or one less dimension. If `res` + has one less dimension than `a`, a dimension is inserted before + `axis`. The call to `func` is then repeated for each axis in `axes`, + with `res` as the first argument. + + Parameters + ---------- + func : function + This function must take two arguments, `func(a, axis)`. + a : array_like + Input array. + axes : array_like + Axes over which `func` is applied; the elements must be integers. + + Returns + ------- + apply_over_axis : ndarray + The output array. The number of dimensions is the same as `a`, + but the shape can be different. This depends on whether `func` + changes the shape of its output with respect to its input. + + See Also + -------- + apply_along_axis : + Apply a function to 1-D slices of an array along the given axis. + + Notes + ----- + This function is equivalent to tuple axis arguments to reorderable ufuncs + with keepdims=True. Tuple axis arguments to ufuncs have been available since + version 1.7.0. + + Examples + -------- + >>> a = np.arange(24).reshape(2,3,4) + >>> a + array([[[ 0, 1, 2, 3], + [ 4, 5, 6, 7], + [ 8, 9, 10, 11]], + [[12, 13, 14, 15], + [16, 17, 18, 19], + [20, 21, 22, 23]]]) + + Sum over axes 0 and 2. The result has same number of dimensions + as the original array: + + >>> np.apply_over_axes(np.sum, a, [0,2]) + array([[[ 60], + [ 92], + [124]]]) + + Tuple axis arguments to ufuncs are equivalent: + + >>> np.sum(a, axis=(0,2), keepdims=True) + array([[[ 60], + [ 92], + [124]]]) + + """ + val = asarray(a) + N = a.ndim + if array(axes).ndim == 0: + axes = (axes,) + for axis in axes: + if axis < 0: + axis = N + axis + args = (val, axis) + res = func(*args) + if res.ndim == val.ndim: + val = res + else: + res = expand_dims(res, axis) + if res.ndim == val.ndim: + val = res + else: + raise ValueError("function is not returning " + "an array of the correct shape") + return val + + +def _expand_dims_dispatcher(a, axis): + return (a,) + + +@array_function_dispatch(_expand_dims_dispatcher) +def expand_dims(a, axis): + """ + Expand the shape of an array. + + Insert a new axis that will appear at the `axis` position in the expanded + array shape. + + Parameters + ---------- + a : array_like + Input array. + axis : int or tuple of ints + Position in the expanded axes where the new axis (or axes) is placed. + + .. deprecated:: 1.13.0 + Passing an axis where ``axis > a.ndim`` will be treated as + ``axis == a.ndim``, and passing ``axis < -a.ndim - 1`` will + be treated as ``axis == 0``. This behavior is deprecated. + + .. versionchanged:: 1.18.0 + A tuple of axes is now supported. Out of range axes as + described above are now forbidden and raise an + `~exceptions.AxisError`. + + Returns + ------- + result : ndarray + View of `a` with the number of dimensions increased. + + See Also + -------- + squeeze : The inverse operation, removing singleton dimensions + reshape : Insert, remove, and combine dimensions, and resize existing ones + atleast_1d, atleast_2d, atleast_3d + + Examples + -------- + >>> x = np.array([1, 2]) + >>> x.shape + (2,) + + The following is equivalent to ``x[np.newaxis, :]`` or ``x[np.newaxis]``: + + >>> y = np.expand_dims(x, axis=0) + >>> y + array([[1, 2]]) + >>> y.shape + (1, 2) + + The following is equivalent to ``x[:, np.newaxis]``: + + >>> y = np.expand_dims(x, axis=1) + >>> y + array([[1], + [2]]) + >>> y.shape + (2, 1) + + ``axis`` may also be a tuple: + + >>> y = np.expand_dims(x, axis=(0, 1)) + >>> y + array([[[1, 2]]]) + + >>> y = np.expand_dims(x, axis=(2, 0)) + >>> y + array([[[1], + [2]]]) + + Note that some examples may use ``None`` instead of ``np.newaxis``. These + are the same objects: + + >>> np.newaxis is None + True + + """ + if isinstance(a, matrix): + a = asarray(a) + else: + a = asanyarray(a) + + if type(axis) not in (tuple, list): + axis = (axis,) + + out_ndim = len(axis) + a.ndim + axis = normalize_axis_tuple(axis, out_ndim) + + shape_it = iter(a.shape) + shape = [1 if ax in axis else next(shape_it) for ax in range(out_ndim)] + + return a.reshape(shape) + + +# NOTE: Remove once deprecation period passes +@set_module("numpy") +def row_stack(tup, *, dtype=None, casting="same_kind"): + # Deprecated in NumPy 2.0, 2023-08-18 + warnings.warn( + "`row_stack` alias is deprecated. " + "Use `np.vstack` directly.", + DeprecationWarning, + stacklevel=2 + ) + return vstack(tup, dtype=dtype, casting=casting) + + +row_stack.__doc__ = vstack.__doc__ + + +def _column_stack_dispatcher(tup): + return _arrays_for_stack_dispatcher(tup) + + +@array_function_dispatch(_column_stack_dispatcher) +def column_stack(tup): + """ + Stack 1-D arrays as columns into a 2-D array. + + Take a sequence of 1-D arrays and stack them as columns + to make a single 2-D array. 2-D arrays are stacked as-is, + just like with `hstack`. 1-D arrays are turned into 2-D columns + first. + + Parameters + ---------- + tup : sequence of 1-D or 2-D arrays. + Arrays to stack. All of them must have the same first dimension. + + Returns + ------- + stacked : 2-D array + The array formed by stacking the given arrays. + + See Also + -------- + stack, hstack, vstack, concatenate + + Examples + -------- + >>> a = np.array((1,2,3)) + >>> b = np.array((2,3,4)) + >>> np.column_stack((a,b)) + array([[1, 2], + [2, 3], + [3, 4]]) + + """ + arrays = [] + for v in tup: + arr = asanyarray(v) + if arr.ndim < 2: + arr = array(arr, copy=None, subok=True, ndmin=2).T + arrays.append(arr) + return _nx.concatenate(arrays, 1) + + +def _dstack_dispatcher(tup): + return _arrays_for_stack_dispatcher(tup) + + +@array_function_dispatch(_dstack_dispatcher) +def dstack(tup): + """ + Stack arrays in sequence depth wise (along third axis). + + This is equivalent to concatenation along the third axis after 2-D arrays + of shape `(M,N)` have been reshaped to `(M,N,1)` and 1-D arrays of shape + `(N,)` have been reshaped to `(1,N,1)`. Rebuilds arrays divided by + `dsplit`. + + This function makes most sense for arrays with up to 3 dimensions. For + instance, for pixel-data with a height (first axis), width (second axis), + and r/g/b channels (third axis). The functions `concatenate`, `stack` and + `block` provide more general stacking and concatenation operations. + + Parameters + ---------- + tup : sequence of arrays + The arrays must have the same shape along all but the third axis. + 1-D or 2-D arrays must have the same shape. + + Returns + ------- + stacked : ndarray + The array formed by stacking the given arrays, will be at least 3-D. + + See Also + -------- + concatenate : Join a sequence of arrays along an existing axis. + stack : Join a sequence of arrays along a new axis. + block : Assemble an nd-array from nested lists of blocks. + vstack : Stack arrays in sequence vertically (row wise). + hstack : Stack arrays in sequence horizontally (column wise). + column_stack : Stack 1-D arrays as columns into a 2-D array. + dsplit : Split array along third axis. + + Examples + -------- + >>> a = np.array((1,2,3)) + >>> b = np.array((2,3,4)) + >>> np.dstack((a,b)) + array([[[1, 2], + [2, 3], + [3, 4]]]) + + >>> a = np.array([[1],[2],[3]]) + >>> b = np.array([[2],[3],[4]]) + >>> np.dstack((a,b)) + array([[[1, 2]], + [[2, 3]], + [[3, 4]]]) + + """ + arrs = atleast_3d(*tup) + if not isinstance(arrs, tuple): + arrs = (arrs,) + return _nx.concatenate(arrs, 2) + + +def _replace_zero_by_x_arrays(sub_arys): + for i in range(len(sub_arys)): + if _nx.ndim(sub_arys[i]) == 0: + sub_arys[i] = _nx.empty(0, dtype=sub_arys[i].dtype) + elif _nx.sometrue(_nx.equal(_nx.shape(sub_arys[i]), 0)): + sub_arys[i] = _nx.empty(0, dtype=sub_arys[i].dtype) + return sub_arys + + +def _array_split_dispatcher(ary, indices_or_sections, axis=None): + return (ary, indices_or_sections) + + +@array_function_dispatch(_array_split_dispatcher) +def array_split(ary, indices_or_sections, axis=0): + """ + Split an array into multiple sub-arrays. + + Please refer to the ``split`` documentation. The only difference + between these functions is that ``array_split`` allows + `indices_or_sections` to be an integer that does *not* equally + divide the axis. For an array of length l that should be split + into n sections, it returns l % n sub-arrays of size l//n + 1 + and the rest of size l//n. + + See Also + -------- + split : Split array into multiple sub-arrays of equal size. + + Examples + -------- + >>> x = np.arange(8.0) + >>> np.array_split(x, 3) + [array([0., 1., 2.]), array([3., 4., 5.]), array([6., 7.])] + + >>> x = np.arange(9) + >>> np.array_split(x, 4) + [array([0, 1, 2]), array([3, 4]), array([5, 6]), array([7, 8])] + + """ + try: + Ntotal = ary.shape[axis] + except AttributeError: + Ntotal = len(ary) + try: + # handle array case. + Nsections = len(indices_or_sections) + 1 + div_points = [0] + list(indices_or_sections) + [Ntotal] + except TypeError: + # indices_or_sections is a scalar, not an array. + Nsections = int(indices_or_sections) + if Nsections <= 0: + raise ValueError('number sections must be larger than 0.') from None + Neach_section, extras = divmod(Ntotal, Nsections) + section_sizes = ([0] + + extras * [Neach_section+1] + + (Nsections-extras) * [Neach_section]) + div_points = _nx.array(section_sizes, dtype=_nx.intp).cumsum() + + sub_arys = [] + sary = _nx.swapaxes(ary, axis, 0) + for i in range(Nsections): + st = div_points[i] + end = div_points[i + 1] + sub_arys.append(_nx.swapaxes(sary[st:end], axis, 0)) + + return sub_arys + + +def _split_dispatcher(ary, indices_or_sections, axis=None): + return (ary, indices_or_sections) + + +@array_function_dispatch(_split_dispatcher) +def split(ary, indices_or_sections, axis=0): + """ + Split an array into multiple sub-arrays as views into `ary`. + + Parameters + ---------- + ary : ndarray + Array to be divided into sub-arrays. + indices_or_sections : int or 1-D array + If `indices_or_sections` is an integer, N, the array will be divided + into N equal arrays along `axis`. If such a split is not possible, + an error is raised. + + If `indices_or_sections` is a 1-D array of sorted integers, the entries + indicate where along `axis` the array is split. For example, + ``[2, 3]`` would, for ``axis=0``, result in + + - ary[:2] + - ary[2:3] + - ary[3:] + + If an index exceeds the dimension of the array along `axis`, + an empty sub-array is returned correspondingly. + axis : int, optional + The axis along which to split, default is 0. + + Returns + ------- + sub-arrays : list of ndarrays + A list of sub-arrays as views into `ary`. + + Raises + ------ + ValueError + If `indices_or_sections` is given as an integer, but + a split does not result in equal division. + + See Also + -------- + array_split : Split an array into multiple sub-arrays of equal or + near-equal size. Does not raise an exception if + an equal division cannot be made. + hsplit : Split array into multiple sub-arrays horizontally (column-wise). + vsplit : Split array into multiple sub-arrays vertically (row wise). + dsplit : Split array into multiple sub-arrays along the 3rd axis (depth). + concatenate : Join a sequence of arrays along an existing axis. + stack : Join a sequence of arrays along a new axis. + hstack : Stack arrays in sequence horizontally (column wise). + vstack : Stack arrays in sequence vertically (row wise). + dstack : Stack arrays in sequence depth wise (along third dimension). + + Examples + -------- + >>> x = np.arange(9.0) + >>> np.split(x, 3) + [array([0., 1., 2.]), array([3., 4., 5.]), array([6., 7., 8.])] + + >>> x = np.arange(8.0) + >>> np.split(x, [3, 5, 6, 10]) + [array([0., 1., 2.]), + array([3., 4.]), + array([5.]), + array([6., 7.]), + array([], dtype=float64)] + + """ + try: + len(indices_or_sections) + except TypeError: + sections = indices_or_sections + N = ary.shape[axis] + if N % sections: + raise ValueError( + 'array split does not result in an equal division') from None + return array_split(ary, indices_or_sections, axis) + + +def _hvdsplit_dispatcher(ary, indices_or_sections): + return (ary, indices_or_sections) + + +@array_function_dispatch(_hvdsplit_dispatcher) +def hsplit(ary, indices_or_sections): + """ + Split an array into multiple sub-arrays horizontally (column-wise). + + Please refer to the `split` documentation. `hsplit` is equivalent + to `split` with ``axis=1``, the array is always split along the second + axis except for 1-D arrays, where it is split at ``axis=0``. + + See Also + -------- + split : Split an array into multiple sub-arrays of equal size. + + Examples + -------- + >>> x = np.arange(16.0).reshape(4, 4) + >>> x + array([[ 0., 1., 2., 3.], + [ 4., 5., 6., 7.], + [ 8., 9., 10., 11.], + [12., 13., 14., 15.]]) + >>> np.hsplit(x, 2) + [array([[ 0., 1.], + [ 4., 5.], + [ 8., 9.], + [12., 13.]]), + array([[ 2., 3.], + [ 6., 7.], + [10., 11.], + [14., 15.]])] + >>> np.hsplit(x, np.array([3, 6])) + [array([[ 0., 1., 2.], + [ 4., 5., 6.], + [ 8., 9., 10.], + [12., 13., 14.]]), + array([[ 3.], + [ 7.], + [11.], + [15.]]), + array([], shape=(4, 0), dtype=float64)] + + With a higher dimensional array the split is still along the second axis. + + >>> x = np.arange(8.0).reshape(2, 2, 2) + >>> x + array([[[0., 1.], + [2., 3.]], + [[4., 5.], + [6., 7.]]]) + >>> np.hsplit(x, 2) + [array([[[0., 1.]], + [[4., 5.]]]), + array([[[2., 3.]], + [[6., 7.]]])] + + With a 1-D array, the split is along axis 0. + + >>> x = np.array([0, 1, 2, 3, 4, 5]) + >>> np.hsplit(x, 2) + [array([0, 1, 2]), array([3, 4, 5])] + + """ + if _nx.ndim(ary) == 0: + raise ValueError('hsplit only works on arrays of 1 or more dimensions') + if ary.ndim > 1: + return split(ary, indices_or_sections, 1) + else: + return split(ary, indices_or_sections, 0) + + +@array_function_dispatch(_hvdsplit_dispatcher) +def vsplit(ary, indices_or_sections): + """ + Split an array into multiple sub-arrays vertically (row-wise). + + Please refer to the ``split`` documentation. ``vsplit`` is equivalent + to ``split`` with `axis=0` (default), the array is always split along the + first axis regardless of the array dimension. + + See Also + -------- + split : Split an array into multiple sub-arrays of equal size. + + Examples + -------- + >>> x = np.arange(16.0).reshape(4, 4) + >>> x + array([[ 0., 1., 2., 3.], + [ 4., 5., 6., 7.], + [ 8., 9., 10., 11.], + [12., 13., 14., 15.]]) + >>> np.vsplit(x, 2) + [array([[0., 1., 2., 3.], + [4., 5., 6., 7.]]), + array([[ 8., 9., 10., 11.], + [12., 13., 14., 15.]])] + >>> np.vsplit(x, np.array([3, 6])) + [array([[ 0., 1., 2., 3.], + [ 4., 5., 6., 7.], + [ 8., 9., 10., 11.]]), + array([[12., 13., 14., 15.]]), + array([], shape=(0, 4), dtype=float64)] + + With a higher dimensional array the split is still along the first axis. + + >>> x = np.arange(8.0).reshape(2, 2, 2) + >>> x + array([[[0., 1.], + [2., 3.]], + [[4., 5.], + [6., 7.]]]) + >>> np.vsplit(x, 2) + [array([[[0., 1.], + [2., 3.]]]), + array([[[4., 5.], + [6., 7.]]])] + + """ + if _nx.ndim(ary) < 2: + raise ValueError('vsplit only works on arrays of 2 or more dimensions') + return split(ary, indices_or_sections, 0) + + +@array_function_dispatch(_hvdsplit_dispatcher) +def dsplit(ary, indices_or_sections): + """ + Split array into multiple sub-arrays along the 3rd axis (depth). + + Please refer to the `split` documentation. `dsplit` is equivalent + to `split` with ``axis=2``, the array is always split along the third + axis provided the array dimension is greater than or equal to 3. + + See Also + -------- + split : Split an array into multiple sub-arrays of equal size. + + Examples + -------- + >>> x = np.arange(16.0).reshape(2, 2, 4) + >>> x + array([[[ 0., 1., 2., 3.], + [ 4., 5., 6., 7.]], + [[ 8., 9., 10., 11.], + [12., 13., 14., 15.]]]) + >>> np.dsplit(x, 2) + [array([[[ 0., 1.], + [ 4., 5.]], + [[ 8., 9.], + [12., 13.]]]), array([[[ 2., 3.], + [ 6., 7.]], + [[10., 11.], + [14., 15.]]])] + >>> np.dsplit(x, np.array([3, 6])) + [array([[[ 0., 1., 2.], + [ 4., 5., 6.]], + [[ 8., 9., 10.], + [12., 13., 14.]]]), + array([[[ 3.], + [ 7.]], + [[11.], + [15.]]]), + array([], shape=(2, 2, 0), dtype=float64)] + """ + if _nx.ndim(ary) < 3: + raise ValueError('dsplit only works on arrays of 3 or more dimensions') + return split(ary, indices_or_sections, 2) + + +def get_array_wrap(*args): + """Find the wrapper for the array with the highest priority. + + In case of ties, leftmost wins. If no wrapper is found, return None. + + .. deprecated:: 2.0 + """ + + # Deprecated in NumPy 2.0, 2023-07-11 + warnings.warn( + "`get_array_wrap` is deprecated. " + "(deprecated in NumPy 2.0)", + DeprecationWarning, + stacklevel=2 + ) + + wrappers = sorted((getattr(x, '__array_priority__', 0), -i, + x.__array_wrap__) for i, x in enumerate(args) + if hasattr(x, '__array_wrap__')) + if wrappers: + return wrappers[-1][-1] + return None + + +def _kron_dispatcher(a, b): + return (a, b) + + +@array_function_dispatch(_kron_dispatcher) +def kron(a, b): + """ + Kronecker product of two arrays. + + Computes the Kronecker product, a composite array made of blocks of the + second array scaled by the first. + + Parameters + ---------- + a, b : array_like + + Returns + ------- + out : ndarray + + See Also + -------- + outer : The outer product + + Notes + ----- + The function assumes that the number of dimensions of `a` and `b` + are the same, if necessary prepending the smallest with ones. + If ``a.shape = (r0,r1,..,rN)`` and ``b.shape = (s0,s1,...,sN)``, + the Kronecker product has shape ``(r0*s0, r1*s1, ..., rN*SN)``. + The elements are products of elements from `a` and `b`, organized + explicitly by:: + + kron(a,b)[k0,k1,...,kN] = a[i0,i1,...,iN] * b[j0,j1,...,jN] + + where:: + + kt = it * st + jt, t = 0,...,N + + In the common 2-D case (N=1), the block structure can be visualized:: + + [[ a[0,0]*b, a[0,1]*b, ... , a[0,-1]*b ], + [ ... ... ], + [ a[-1,0]*b, a[-1,1]*b, ... , a[-1,-1]*b ]] + + + Examples + -------- + >>> np.kron([1,10,100], [5,6,7]) + array([ 5, 6, 7, ..., 500, 600, 700]) + >>> np.kron([5,6,7], [1,10,100]) + array([ 5, 50, 500, ..., 7, 70, 700]) + + >>> np.kron(np.eye(2), np.ones((2,2))) + array([[1., 1., 0., 0.], + [1., 1., 0., 0.], + [0., 0., 1., 1.], + [0., 0., 1., 1.]]) + + >>> a = np.arange(100).reshape((2,5,2,5)) + >>> b = np.arange(24).reshape((2,3,4)) + >>> c = np.kron(a,b) + >>> c.shape + (2, 10, 6, 20) + >>> I = (1,3,0,2) + >>> J = (0,2,1) + >>> J1 = (0,) + J # extend to ndim=4 + >>> S1 = (1,) + b.shape + >>> K = tuple(np.array(I) * np.array(S1) + np.array(J1)) + >>> c[K] == a[I]*b[J] + True + + """ + # Working: + # 1. Equalise the shapes by prepending smaller array with 1s + # 2. Expand shapes of both the arrays by adding new axes at + # odd positions for 1st array and even positions for 2nd + # 3. Compute the product of the modified array + # 4. The inner most array elements now contain the rows of + # the Kronecker product + # 5. Reshape the result to kron's shape, which is same as + # product of shapes of the two arrays. + b = asanyarray(b) + a = array(a, copy=None, subok=True, ndmin=b.ndim) + is_any_mat = isinstance(a, matrix) or isinstance(b, matrix) + ndb, nda = b.ndim, a.ndim + nd = max(ndb, nda) + + if (nda == 0 or ndb == 0): + return _nx.multiply(a, b) + + as_ = a.shape + bs = b.shape + if not a.flags.contiguous: + a = reshape(a, as_) + if not b.flags.contiguous: + b = reshape(b, bs) + + # Equalise the shapes by prepending smaller one with 1s + as_ = (1,)*max(0, ndb-nda) + as_ + bs = (1,)*max(0, nda-ndb) + bs + + # Insert empty dimensions + a_arr = expand_dims(a, axis=tuple(range(ndb-nda))) + b_arr = expand_dims(b, axis=tuple(range(nda-ndb))) + + # Compute the product + a_arr = expand_dims(a_arr, axis=tuple(range(1, nd*2, 2))) + b_arr = expand_dims(b_arr, axis=tuple(range(0, nd*2, 2))) + # In case of `mat`, convert result to `array` + result = _nx.multiply(a_arr, b_arr, subok=(not is_any_mat)) + + # Reshape back + result = result.reshape(_nx.multiply(as_, bs)) + + return result if not is_any_mat else matrix(result, copy=False) + + +def _tile_dispatcher(A, reps): + return (A, reps) + + +@array_function_dispatch(_tile_dispatcher) +def tile(A, reps): + """ + Construct an array by repeating A the number of times given by reps. + + If `reps` has length ``d``, the result will have dimension of + ``max(d, A.ndim)``. + + If ``A.ndim < d``, `A` is promoted to be d-dimensional by prepending new + axes. So a shape (3,) array is promoted to (1, 3) for 2-D replication, + or shape (1, 1, 3) for 3-D replication. If this is not the desired + behavior, promote `A` to d-dimensions manually before calling this + function. + + If ``A.ndim > d``, `reps` is promoted to `A`.ndim by prepending 1's to it. + Thus for an `A` of shape (2, 3, 4, 5), a `reps` of (2, 2) is treated as + (1, 1, 2, 2). + + Note : Although tile may be used for broadcasting, it is strongly + recommended to use numpy's broadcasting operations and functions. + + Parameters + ---------- + A : array_like + The input array. + reps : array_like + The number of repetitions of `A` along each axis. + + Returns + ------- + c : ndarray + The tiled output array. + + See Also + -------- + repeat : Repeat elements of an array. + broadcast_to : Broadcast an array to a new shape + + Examples + -------- + >>> a = np.array([0, 1, 2]) + >>> np.tile(a, 2) + array([0, 1, 2, 0, 1, 2]) + >>> np.tile(a, (2, 2)) + array([[0, 1, 2, 0, 1, 2], + [0, 1, 2, 0, 1, 2]]) + >>> np.tile(a, (2, 1, 2)) + array([[[0, 1, 2, 0, 1, 2]], + [[0, 1, 2, 0, 1, 2]]]) + + >>> b = np.array([[1, 2], [3, 4]]) + >>> np.tile(b, 2) + array([[1, 2, 1, 2], + [3, 4, 3, 4]]) + >>> np.tile(b, (2, 1)) + array([[1, 2], + [3, 4], + [1, 2], + [3, 4]]) + + >>> c = np.array([1,2,3,4]) + >>> np.tile(c,(4,1)) + array([[1, 2, 3, 4], + [1, 2, 3, 4], + [1, 2, 3, 4], + [1, 2, 3, 4]]) + """ + try: + tup = tuple(reps) + except TypeError: + tup = (reps,) + d = len(tup) + if all(x == 1 for x in tup) and isinstance(A, _nx.ndarray): + # Fixes the problem that the function does not make a copy if A is a + # numpy array and the repetitions are 1 in all dimensions + return _nx.array(A, copy=True, subok=True, ndmin=d) + else: + # Note that no copy of zero-sized arrays is made. However since they + # have no data there is no risk of an inadvertent overwrite. + c = _nx.array(A, copy=None, subok=True, ndmin=d) + if (d < c.ndim): + tup = (1,)*(c.ndim-d) + tup + shape_out = tuple(s*t for s, t in zip(c.shape, tup)) + n = c.size + if n > 0: + for dim_in, nrep in zip(c.shape, tup): + if nrep != 1: + c = c.reshape(-1, n).repeat(nrep, 0) + n //= dim_in + return c.reshape(shape_out) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_shape_base_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_shape_base_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..cdfe9d9d56376f28c457c7cb781af529550b2d24 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_shape_base_impl.pyi @@ -0,0 +1,202 @@ +import sys +from collections.abc import Callable, Sequence +from typing import TypeVar, Any, overload, SupportsIndex, Protocol + +if sys.version_info >= (3, 10): + from typing import ParamSpec, Concatenate +else: + from typing_extensions import ParamSpec, Concatenate + +import numpy as np +from numpy import ( + generic, + integer, + ufunc, + unsignedinteger, + signedinteger, + floating, + complexfloating, + object_, +) + +from numpy._typing import ( + ArrayLike, + NDArray, + _ShapeLike, + _ArrayLike, + _ArrayLikeBool_co, + _ArrayLikeUInt_co, + _ArrayLikeInt_co, + _ArrayLikeFloat_co, + _ArrayLikeComplex_co, + _ArrayLikeObject_co, +) + +from numpy._core.shape_base import vstack + +_P = ParamSpec("_P") +_SCT = TypeVar("_SCT", bound=generic) + +# Signature of `__array_wrap__` +class _ArrayWrap(Protocol): + def __call__( + self, + array: NDArray[Any], + context: None | tuple[ufunc, tuple[Any, ...], int] = ..., + return_scalar: bool = ..., + /, + ) -> Any: ... + +class _SupportsArrayWrap(Protocol): + @property + def __array_wrap__(self) -> _ArrayWrap: ... + + +__all__: list[str] + +def take_along_axis( + arr: _SCT | NDArray[_SCT], + indices: NDArray[integer[Any]], + axis: None | int, +) -> NDArray[_SCT]: ... + +def put_along_axis( + arr: NDArray[_SCT], + indices: NDArray[integer[Any]], + values: ArrayLike, + axis: None | int, +) -> None: ... + +@overload +def apply_along_axis( + func1d: Callable[Concatenate[NDArray[Any], _P], _ArrayLike[_SCT]], + axis: SupportsIndex, + arr: ArrayLike, + *args: _P.args, + **kwargs: _P.kwargs, +) -> NDArray[_SCT]: ... +@overload +def apply_along_axis( + func1d: Callable[Concatenate[NDArray[Any], _P], ArrayLike], + axis: SupportsIndex, + arr: ArrayLike, + *args: _P.args, + **kwargs: _P.kwargs, +) -> NDArray[Any]: ... + +def apply_over_axes( + func: Callable[[NDArray[Any], int], NDArray[_SCT]], + a: ArrayLike, + axes: int | Sequence[int], +) -> NDArray[_SCT]: ... + +@overload +def expand_dims( + a: _ArrayLike[_SCT], + axis: _ShapeLike, +) -> NDArray[_SCT]: ... +@overload +def expand_dims( + a: ArrayLike, + axis: _ShapeLike, +) -> NDArray[Any]: ... + +@overload +def column_stack(tup: Sequence[_ArrayLike[_SCT]]) -> NDArray[_SCT]: ... +@overload +def column_stack(tup: Sequence[ArrayLike]) -> NDArray[Any]: ... + +@overload +def dstack(tup: Sequence[_ArrayLike[_SCT]]) -> NDArray[_SCT]: ... +@overload +def dstack(tup: Sequence[ArrayLike]) -> NDArray[Any]: ... + +@overload +def array_split( + ary: _ArrayLike[_SCT], + indices_or_sections: _ShapeLike, + axis: SupportsIndex = ..., +) -> list[NDArray[_SCT]]: ... +@overload +def array_split( + ary: ArrayLike, + indices_or_sections: _ShapeLike, + axis: SupportsIndex = ..., +) -> list[NDArray[Any]]: ... + +@overload +def split( + ary: _ArrayLike[_SCT], + indices_or_sections: _ShapeLike, + axis: SupportsIndex = ..., +) -> list[NDArray[_SCT]]: ... +@overload +def split( + ary: ArrayLike, + indices_or_sections: _ShapeLike, + axis: SupportsIndex = ..., +) -> list[NDArray[Any]]: ... + +@overload +def hsplit( + ary: _ArrayLike[_SCT], + indices_or_sections: _ShapeLike, +) -> list[NDArray[_SCT]]: ... +@overload +def hsplit( + ary: ArrayLike, + indices_or_sections: _ShapeLike, +) -> list[NDArray[Any]]: ... + +@overload +def vsplit( + ary: _ArrayLike[_SCT], + indices_or_sections: _ShapeLike, +) -> list[NDArray[_SCT]]: ... +@overload +def vsplit( + ary: ArrayLike, + indices_or_sections: _ShapeLike, +) -> list[NDArray[Any]]: ... + +@overload +def dsplit( + ary: _ArrayLike[_SCT], + indices_or_sections: _ShapeLike, +) -> list[NDArray[_SCT]]: ... +@overload +def dsplit( + ary: ArrayLike, + indices_or_sections: _ShapeLike, +) -> list[NDArray[Any]]: ... + +@overload +def get_array_wrap(*args: _SupportsArrayWrap) -> _ArrayWrap: ... +@overload +def get_array_wrap(*args: object) -> None | _ArrayWrap: ... + +@overload +def kron(a: _ArrayLikeBool_co, b: _ArrayLikeBool_co) -> NDArray[np.bool]: ... # type: ignore[misc] +@overload +def kron(a: _ArrayLikeUInt_co, b: _ArrayLikeUInt_co) -> NDArray[unsignedinteger[Any]]: ... # type: ignore[misc] +@overload +def kron(a: _ArrayLikeInt_co, b: _ArrayLikeInt_co) -> NDArray[signedinteger[Any]]: ... # type: ignore[misc] +@overload +def kron(a: _ArrayLikeFloat_co, b: _ArrayLikeFloat_co) -> NDArray[floating[Any]]: ... # type: ignore[misc] +@overload +def kron(a: _ArrayLikeComplex_co, b: _ArrayLikeComplex_co) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def kron(a: _ArrayLikeObject_co, b: Any) -> NDArray[object_]: ... +@overload +def kron(a: Any, b: _ArrayLikeObject_co) -> NDArray[object_]: ... + +@overload +def tile( + A: _ArrayLike[_SCT], + reps: int | Sequence[int], +) -> NDArray[_SCT]: ... +@overload +def tile( + A: ArrayLike, + reps: int | Sequence[int], +) -> NDArray[Any]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_stride_tricks_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_stride_tricks_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..0cfbbcfe9c81d2644f4f8c1c85e5e4bbac25b019 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_stride_tricks_impl.py @@ -0,0 +1,558 @@ +""" +Utilities that manipulate strides to achieve desirable effects. + +An explanation of strides can be found in the :ref:`arrays.ndarray`. + +Functions +--------- + +.. autosummary:: + :toctree: generated/ + +""" +import numpy as np +from numpy._core.numeric import normalize_axis_tuple +from numpy._core.overrides import array_function_dispatch, set_module + +__all__ = ['broadcast_to', 'broadcast_arrays', 'broadcast_shapes'] + + +class DummyArray: + """Dummy object that just exists to hang __array_interface__ dictionaries + and possibly keep alive a reference to a base array. + """ + + def __init__(self, interface, base=None): + self.__array_interface__ = interface + self.base = base + + +def _maybe_view_as_subclass(original_array, new_array): + if type(original_array) is not type(new_array): + # if input was an ndarray subclass and subclasses were OK, + # then view the result as that subclass. + new_array = new_array.view(type=type(original_array)) + # Since we have done something akin to a view from original_array, we + # should let the subclass finalize (if it has it implemented, i.e., is + # not None). + if new_array.__array_finalize__: + new_array.__array_finalize__(original_array) + return new_array + + +@set_module("numpy.lib.stride_tricks") +def as_strided(x, shape=None, strides=None, subok=False, writeable=True): + """ + Create a view into the array with the given shape and strides. + + .. warning:: This function has to be used with extreme care, see notes. + + Parameters + ---------- + x : ndarray + Array to create a new. + shape : sequence of int, optional + The shape of the new array. Defaults to ``x.shape``. + strides : sequence of int, optional + The strides of the new array. Defaults to ``x.strides``. + subok : bool, optional + .. versionadded:: 1.10 + + If True, subclasses are preserved. + writeable : bool, optional + .. versionadded:: 1.12 + + If set to False, the returned array will always be readonly. + Otherwise it will be writable if the original array was. It + is advisable to set this to False if possible (see Notes). + + Returns + ------- + view : ndarray + + See also + -------- + broadcast_to : broadcast an array to a given shape. + reshape : reshape an array. + lib.stride_tricks.sliding_window_view : + userfriendly and safe function for a creation of sliding window views. + + Notes + ----- + ``as_strided`` creates a view into the array given the exact strides + and shape. This means it manipulates the internal data structure of + ndarray and, if done incorrectly, the array elements can point to + invalid memory and can corrupt results or crash your program. + It is advisable to always use the original ``x.strides`` when + calculating new strides to avoid reliance on a contiguous memory + layout. + + Furthermore, arrays created with this function often contain self + overlapping memory, so that two elements are identical. + Vectorized write operations on such arrays will typically be + unpredictable. They may even give different results for small, large, + or transposed arrays. + + Since writing to these arrays has to be tested and done with great + care, you may want to use ``writeable=False`` to avoid accidental write + operations. + + For these reasons it is advisable to avoid ``as_strided`` when + possible. + """ + # first convert input to array, possibly keeping subclass + x = np.array(x, copy=None, subok=subok) + interface = dict(x.__array_interface__) + if shape is not None: + interface['shape'] = tuple(shape) + if strides is not None: + interface['strides'] = tuple(strides) + + array = np.asarray(DummyArray(interface, base=x)) + # The route via `__interface__` does not preserve structured + # dtypes. Since dtype should remain unchanged, we set it explicitly. + array.dtype = x.dtype + + view = _maybe_view_as_subclass(x, array) + + if view.flags.writeable and not writeable: + view.flags.writeable = False + + return view + + +def _sliding_window_view_dispatcher(x, window_shape, axis=None, *, + subok=None, writeable=None): + return (x,) + + +@array_function_dispatch( + _sliding_window_view_dispatcher, module="numpy.lib.stride_tricks" +) +def sliding_window_view(x, window_shape, axis=None, *, + subok=False, writeable=False): + """ + Create a sliding window view into the array with the given window shape. + + Also known as rolling or moving window, the window slides across all + dimensions of the array and extracts subsets of the array at all window + positions. + + .. versionadded:: 1.20.0 + + Parameters + ---------- + x : array_like + Array to create the sliding window view from. + window_shape : int or tuple of int + Size of window over each axis that takes part in the sliding window. + If `axis` is not present, must have same length as the number of input + array dimensions. Single integers `i` are treated as if they were the + tuple `(i,)`. + axis : int or tuple of int, optional + Axis or axes along which the sliding window is applied. + By default, the sliding window is applied to all axes and + `window_shape[i]` will refer to axis `i` of `x`. + If `axis` is given as a `tuple of int`, `window_shape[i]` will refer to + the axis `axis[i]` of `x`. + Single integers `i` are treated as if they were the tuple `(i,)`. + subok : bool, optional + If True, sub-classes will be passed-through, otherwise the returned + array will be forced to be a base-class array (default). + writeable : bool, optional + When true, allow writing to the returned view. The default is false, + as this should be used with caution: the returned view contains the + same memory location multiple times, so writing to one location will + cause others to change. + + Returns + ------- + view : ndarray + Sliding window view of the array. The sliding window dimensions are + inserted at the end, and the original dimensions are trimmed as + required by the size of the sliding window. + That is, ``view.shape = x_shape_trimmed + window_shape``, where + ``x_shape_trimmed`` is ``x.shape`` with every entry reduced by one less + than the corresponding window size. + + See Also + -------- + lib.stride_tricks.as_strided: A lower-level and less safe routine for + creating arbitrary views from custom shape and strides. + broadcast_to: broadcast an array to a given shape. + + Notes + ----- + For many applications using a sliding window view can be convenient, but + potentially very slow. Often specialized solutions exist, for example: + + - `scipy.signal.fftconvolve` + + - filtering functions in `scipy.ndimage` + + - moving window functions provided by + `bottleneck `_. + + As a rough estimate, a sliding window approach with an input size of `N` + and a window size of `W` will scale as `O(N*W)` where frequently a special + algorithm can achieve `O(N)`. That means that the sliding window variant + for a window size of 100 can be a 100 times slower than a more specialized + version. + + Nevertheless, for small window sizes, when no custom algorithm exists, or + as a prototyping and developing tool, this function can be a good solution. + + Examples + -------- + >>> from numpy.lib.stride_tricks import sliding_window_view + >>> x = np.arange(6) + >>> x.shape + (6,) + >>> v = sliding_window_view(x, 3) + >>> v.shape + (4, 3) + >>> v + array([[0, 1, 2], + [1, 2, 3], + [2, 3, 4], + [3, 4, 5]]) + + This also works in more dimensions, e.g. + + >>> i, j = np.ogrid[:3, :4] + >>> x = 10*i + j + >>> x.shape + (3, 4) + >>> x + array([[ 0, 1, 2, 3], + [10, 11, 12, 13], + [20, 21, 22, 23]]) + >>> shape = (2,2) + >>> v = sliding_window_view(x, shape) + >>> v.shape + (2, 3, 2, 2) + >>> v + array([[[[ 0, 1], + [10, 11]], + [[ 1, 2], + [11, 12]], + [[ 2, 3], + [12, 13]]], + [[[10, 11], + [20, 21]], + [[11, 12], + [21, 22]], + [[12, 13], + [22, 23]]]]) + + The axis can be specified explicitly: + + >>> v = sliding_window_view(x, 3, 0) + >>> v.shape + (1, 4, 3) + >>> v + array([[[ 0, 10, 20], + [ 1, 11, 21], + [ 2, 12, 22], + [ 3, 13, 23]]]) + + The same axis can be used several times. In that case, every use reduces + the corresponding original dimension: + + >>> v = sliding_window_view(x, (2, 3), (1, 1)) + >>> v.shape + (3, 1, 2, 3) + >>> v + array([[[[ 0, 1, 2], + [ 1, 2, 3]]], + [[[10, 11, 12], + [11, 12, 13]]], + [[[20, 21, 22], + [21, 22, 23]]]]) + + Combining with stepped slicing (`::step`), this can be used to take sliding + views which skip elements: + + >>> x = np.arange(7) + >>> sliding_window_view(x, 5)[:, ::2] + array([[0, 2, 4], + [1, 3, 5], + [2, 4, 6]]) + + or views which move by multiple elements + + >>> x = np.arange(7) + >>> sliding_window_view(x, 3)[::2, :] + array([[0, 1, 2], + [2, 3, 4], + [4, 5, 6]]) + + A common application of `sliding_window_view` is the calculation of running + statistics. The simplest example is the + `moving average `_: + + >>> x = np.arange(6) + >>> x.shape + (6,) + >>> v = sliding_window_view(x, 3) + >>> v.shape + (4, 3) + >>> v + array([[0, 1, 2], + [1, 2, 3], + [2, 3, 4], + [3, 4, 5]]) + >>> moving_average = v.mean(axis=-1) + >>> moving_average + array([1., 2., 3., 4.]) + + Note that a sliding window approach is often **not** optimal (see Notes). + """ + window_shape = (tuple(window_shape) + if np.iterable(window_shape) + else (window_shape,)) + # first convert input to array, possibly keeping subclass + x = np.array(x, copy=None, subok=subok) + + window_shape_array = np.array(window_shape) + if np.any(window_shape_array < 0): + raise ValueError('`window_shape` cannot contain negative values') + + if axis is None: + axis = tuple(range(x.ndim)) + if len(window_shape) != len(axis): + raise ValueError(f'Since axis is `None`, must provide ' + f'window_shape for all dimensions of `x`; ' + f'got {len(window_shape)} window_shape elements ' + f'and `x.ndim` is {x.ndim}.') + else: + axis = normalize_axis_tuple(axis, x.ndim, allow_duplicate=True) + if len(window_shape) != len(axis): + raise ValueError(f'Must provide matching length window_shape and ' + f'axis; got {len(window_shape)} window_shape ' + f'elements and {len(axis)} axes elements.') + + out_strides = x.strides + tuple(x.strides[ax] for ax in axis) + + # note: same axis can be windowed repeatedly + x_shape_trimmed = list(x.shape) + for ax, dim in zip(axis, window_shape): + if x_shape_trimmed[ax] < dim: + raise ValueError( + 'window shape cannot be larger than input array shape') + x_shape_trimmed[ax] -= dim - 1 + out_shape = tuple(x_shape_trimmed) + window_shape + return as_strided(x, strides=out_strides, shape=out_shape, + subok=subok, writeable=writeable) + + +def _broadcast_to(array, shape, subok, readonly): + shape = tuple(shape) if np.iterable(shape) else (shape,) + array = np.array(array, copy=None, subok=subok) + if not shape and array.shape: + raise ValueError('cannot broadcast a non-scalar to a scalar array') + if any(size < 0 for size in shape): + raise ValueError('all elements of broadcast shape must be non-' + 'negative') + extras = [] + it = np.nditer( + (array,), flags=['multi_index', 'refs_ok', 'zerosize_ok'] + extras, + op_flags=['readonly'], itershape=shape, order='C') + with it: + # never really has writebackifcopy semantics + broadcast = it.itviews[0] + result = _maybe_view_as_subclass(array, broadcast) + # In a future version this will go away + if not readonly and array.flags._writeable_no_warn: + result.flags.writeable = True + result.flags._warn_on_write = True + return result + + +def _broadcast_to_dispatcher(array, shape, subok=None): + return (array,) + + +@array_function_dispatch(_broadcast_to_dispatcher, module='numpy') +def broadcast_to(array, shape, subok=False): + """Broadcast an array to a new shape. + + Parameters + ---------- + array : array_like + The array to broadcast. + shape : tuple or int + The shape of the desired array. A single integer ``i`` is interpreted + as ``(i,)``. + subok : bool, optional + If True, then sub-classes will be passed-through, otherwise + the returned array will be forced to be a base-class array (default). + + Returns + ------- + broadcast : array + A readonly view on the original array with the given shape. It is + typically not contiguous. Furthermore, more than one element of a + broadcasted array may refer to a single memory location. + + Raises + ------ + ValueError + If the array is not compatible with the new shape according to NumPy's + broadcasting rules. + + See Also + -------- + broadcast + broadcast_arrays + broadcast_shapes + + Notes + ----- + .. versionadded:: 1.10.0 + + Examples + -------- + >>> x = np.array([1, 2, 3]) + >>> np.broadcast_to(x, (3, 3)) + array([[1, 2, 3], + [1, 2, 3], + [1, 2, 3]]) + """ + return _broadcast_to(array, shape, subok=subok, readonly=True) + + +def _broadcast_shape(*args): + """Returns the shape of the arrays that would result from broadcasting the + supplied arrays against each other. + """ + # use the old-iterator because np.nditer does not handle size 0 arrays + # consistently + b = np.broadcast(*args[:32]) + # unfortunately, it cannot handle 32 or more arguments directly + for pos in range(32, len(args), 31): + # ironically, np.broadcast does not properly handle np.broadcast + # objects (it treats them as scalars) + # use broadcasting to avoid allocating the full array + b = broadcast_to(0, b.shape) + b = np.broadcast(b, *args[pos:(pos + 31)]) + return b.shape + + +@set_module('numpy') +def broadcast_shapes(*args): + """ + Broadcast the input shapes into a single shape. + + :ref:`Learn more about broadcasting here `. + + .. versionadded:: 1.20.0 + + Parameters + ---------- + *args : tuples of ints, or ints + The shapes to be broadcast against each other. + + Returns + ------- + tuple + Broadcasted shape. + + Raises + ------ + ValueError + If the shapes are not compatible and cannot be broadcast according + to NumPy's broadcasting rules. + + See Also + -------- + broadcast + broadcast_arrays + broadcast_to + + Examples + -------- + >>> np.broadcast_shapes((1, 2), (3, 1), (3, 2)) + (3, 2) + + >>> np.broadcast_shapes((6, 7), (5, 6, 1), (7,), (5, 1, 7)) + (5, 6, 7) + """ + arrays = [np.empty(x, dtype=[]) for x in args] + return _broadcast_shape(*arrays) + + +def _broadcast_arrays_dispatcher(*args, subok=None): + return args + + +@array_function_dispatch(_broadcast_arrays_dispatcher, module='numpy') +def broadcast_arrays(*args, subok=False): + """ + Broadcast any number of arrays against each other. + + Parameters + ---------- + *args : array_likes + The arrays to broadcast. + + subok : bool, optional + If True, then sub-classes will be passed-through, otherwise + the returned arrays will be forced to be a base-class array (default). + + Returns + ------- + broadcasted : tuple of arrays + These arrays are views on the original arrays. They are typically + not contiguous. Furthermore, more than one element of a + broadcasted array may refer to a single memory location. If you need + to write to the arrays, make copies first. While you can set the + ``writable`` flag True, writing to a single output value may end up + changing more than one location in the output array. + + .. deprecated:: 1.17 + The output is currently marked so that if written to, a deprecation + warning will be emitted. A future version will set the + ``writable`` flag False so writing to it will raise an error. + + See Also + -------- + broadcast + broadcast_to + broadcast_shapes + + Examples + -------- + >>> x = np.array([[1,2,3]]) + >>> y = np.array([[4],[5]]) + >>> np.broadcast_arrays(x, y) + (array([[1, 2, 3], + [1, 2, 3]]), + array([[4, 4, 4], + [5, 5, 5]])) + + Here is a useful idiom for getting contiguous copies instead of + non-contiguous views. + + >>> [np.array(a) for a in np.broadcast_arrays(x, y)] + [array([[1, 2, 3], + [1, 2, 3]]), + array([[4, 4, 4], + [5, 5, 5]])] + + """ + # nditer is not used here to avoid the limit of 32 arrays. + # Otherwise, something like the following one-liner would suffice: + # return np.nditer(args, flags=['multi_index', 'zerosize_ok'], + # order='C').itviews + + args = tuple(np.array(_m, copy=None, subok=subok) for _m in args) + + shape = _broadcast_shape(*args) + + if all(array.shape == shape for array in args): + # Common case where nothing needs to be broadcasted. + return args + + return tuple(_broadcast_to(array, shape, subok=subok, readonly=False) + for array in args) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_stride_tricks_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_stride_tricks_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..cf635f1fb640b4cfe248d56cc7fb161745a798d0 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_stride_tricks_impl.pyi @@ -0,0 +1,80 @@ +from collections.abc import Iterable +from typing import Any, TypeVar, overload, SupportsIndex + +from numpy import generic +from numpy._typing import ( + NDArray, + ArrayLike, + _ShapeLike, + _Shape, + _ArrayLike +) + +_SCT = TypeVar("_SCT", bound=generic) + +__all__: list[str] + +class DummyArray: + __array_interface__: dict[str, Any] + base: None | NDArray[Any] + def __init__( + self, + interface: dict[str, Any], + base: None | NDArray[Any] = ..., + ) -> None: ... + +@overload +def as_strided( + x: _ArrayLike[_SCT], + shape: None | Iterable[int] = ..., + strides: None | Iterable[int] = ..., + subok: bool = ..., + writeable: bool = ..., +) -> NDArray[_SCT]: ... +@overload +def as_strided( + x: ArrayLike, + shape: None | Iterable[int] = ..., + strides: None | Iterable[int] = ..., + subok: bool = ..., + writeable: bool = ..., +) -> NDArray[Any]: ... + +@overload +def sliding_window_view( + x: _ArrayLike[_SCT], + window_shape: int | Iterable[int], + axis: None | SupportsIndex = ..., + *, + subok: bool = ..., + writeable: bool = ..., +) -> NDArray[_SCT]: ... +@overload +def sliding_window_view( + x: ArrayLike, + window_shape: int | Iterable[int], + axis: None | SupportsIndex = ..., + *, + subok: bool = ..., + writeable: bool = ..., +) -> NDArray[Any]: ... + +@overload +def broadcast_to( + array: _ArrayLike[_SCT], + shape: int | Iterable[int], + subok: bool = ..., +) -> NDArray[_SCT]: ... +@overload +def broadcast_to( + array: ArrayLike, + shape: int | Iterable[int], + subok: bool = ..., +) -> NDArray[Any]: ... + +def broadcast_shapes(*args: _ShapeLike) -> _Shape: ... + +def broadcast_arrays( + *args: ArrayLike, + subok: bool = ..., +) -> tuple[NDArray[Any], ...]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_twodim_base_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_twodim_base_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..dd6372429687949bbcc5b8004e645683177b2cfa --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_twodim_base_impl.py @@ -0,0 +1,1188 @@ +""" Basic functions for manipulating 2d arrays + +""" +import functools +import operator + +from numpy._core._multiarray_umath import _array_converter +from numpy._core.numeric import ( + asanyarray, arange, zeros, greater_equal, multiply, ones, + asarray, where, int8, int16, int32, int64, intp, empty, promote_types, + diagonal, nonzero, indices + ) +from numpy._core.overrides import set_array_function_like_doc, set_module +from numpy._core import overrides +from numpy._core import iinfo +from numpy.lib._stride_tricks_impl import broadcast_to + + +__all__ = [ + 'diag', 'diagflat', 'eye', 'fliplr', 'flipud', 'tri', 'triu', + 'tril', 'vander', 'histogram2d', 'mask_indices', 'tril_indices', + 'tril_indices_from', 'triu_indices', 'triu_indices_from', ] + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +i1 = iinfo(int8) +i2 = iinfo(int16) +i4 = iinfo(int32) + + +def _min_int(low, high): + """ get small int that fits the range """ + if high <= i1.max and low >= i1.min: + return int8 + if high <= i2.max and low >= i2.min: + return int16 + if high <= i4.max and low >= i4.min: + return int32 + return int64 + + +def _flip_dispatcher(m): + return (m,) + + +@array_function_dispatch(_flip_dispatcher) +def fliplr(m): + """ + Reverse the order of elements along axis 1 (left/right). + + For a 2-D array, this flips the entries in each row in the left/right + direction. Columns are preserved, but appear in a different order than + before. + + Parameters + ---------- + m : array_like + Input array, must be at least 2-D. + + Returns + ------- + f : ndarray + A view of `m` with the columns reversed. Since a view + is returned, this operation is :math:`\\mathcal O(1)`. + + See Also + -------- + flipud : Flip array in the up/down direction. + flip : Flip array in one or more dimensions. + rot90 : Rotate array counterclockwise. + + Notes + ----- + Equivalent to ``m[:,::-1]`` or ``np.flip(m, axis=1)``. + Requires the array to be at least 2-D. + + Examples + -------- + >>> A = np.diag([1.,2.,3.]) + >>> A + array([[1., 0., 0.], + [0., 2., 0.], + [0., 0., 3.]]) + >>> np.fliplr(A) + array([[0., 0., 1.], + [0., 2., 0.], + [3., 0., 0.]]) + + >>> A = np.random.randn(2,3,5) + >>> np.all(np.fliplr(A) == A[:,::-1,...]) + True + + """ + m = asanyarray(m) + if m.ndim < 2: + raise ValueError("Input must be >= 2-d.") + return m[:, ::-1] + + +@array_function_dispatch(_flip_dispatcher) +def flipud(m): + """ + Reverse the order of elements along axis 0 (up/down). + + For a 2-D array, this flips the entries in each column in the up/down + direction. Rows are preserved, but appear in a different order than before. + + Parameters + ---------- + m : array_like + Input array. + + Returns + ------- + out : array_like + A view of `m` with the rows reversed. Since a view is + returned, this operation is :math:`\\mathcal O(1)`. + + See Also + -------- + fliplr : Flip array in the left/right direction. + flip : Flip array in one or more dimensions. + rot90 : Rotate array counterclockwise. + + Notes + ----- + Equivalent to ``m[::-1, ...]`` or ``np.flip(m, axis=0)``. + Requires the array to be at least 1-D. + + Examples + -------- + >>> A = np.diag([1.0, 2, 3]) + >>> A + array([[1., 0., 0.], + [0., 2., 0.], + [0., 0., 3.]]) + >>> np.flipud(A) + array([[0., 0., 3.], + [0., 2., 0.], + [1., 0., 0.]]) + + >>> A = np.random.randn(2,3,5) + >>> np.all(np.flipud(A) == A[::-1,...]) + True + + >>> np.flipud([1,2]) + array([2, 1]) + + """ + m = asanyarray(m) + if m.ndim < 1: + raise ValueError("Input must be >= 1-d.") + return m[::-1, ...] + + +@set_array_function_like_doc +@set_module('numpy') +def eye(N, M=None, k=0, dtype=float, order='C', *, device=None, like=None): + """ + Return a 2-D array with ones on the diagonal and zeros elsewhere. + + Parameters + ---------- + N : int + Number of rows in the output. + M : int, optional + Number of columns in the output. If None, defaults to `N`. + k : int, optional + Index of the diagonal: 0 (the default) refers to the main diagonal, + a positive value refers to an upper diagonal, and a negative value + to a lower diagonal. + dtype : data-type, optional + Data-type of the returned array. + order : {'C', 'F'}, optional + Whether the output should be stored in row-major (C-style) or + column-major (Fortran-style) order in memory. + + .. versionadded:: 1.14.0 + device : str, optional + The device on which to place the created array. Default: None. + For Array-API interoperability only, so must be ``"cpu"`` if passed. + + .. versionadded:: 2.0.0 + ${ARRAY_FUNCTION_LIKE} + + .. versionadded:: 1.20.0 + + Returns + ------- + I : ndarray of shape (N,M) + An array where all elements are equal to zero, except for the `k`-th + diagonal, whose values are equal to one. + + See Also + -------- + identity : (almost) equivalent function + diag : diagonal 2-D array from a 1-D array specified by the user. + + Examples + -------- + >>> np.eye(2, dtype=int) + array([[1, 0], + [0, 1]]) + >>> np.eye(3, k=1) + array([[0., 1., 0.], + [0., 0., 1.], + [0., 0., 0.]]) + + """ + if like is not None: + return _eye_with_like( + like, N, M=M, k=k, dtype=dtype, order=order, device=device + ) + if M is None: + M = N + m = zeros((N, M), dtype=dtype, order=order, device=device) + if k >= M: + return m + # Ensure M and k are integers, so we don't get any surprise casting + # results in the expressions `M-k` and `M+1` used below. This avoids + # a problem with inputs with type (for example) np.uint64. + M = operator.index(M) + k = operator.index(k) + if k >= 0: + i = k + else: + i = (-k) * M + m[:M-k].flat[i::M+1] = 1 + return m + + +_eye_with_like = array_function_dispatch()(eye) + + +def _diag_dispatcher(v, k=None): + return (v,) + + +@array_function_dispatch(_diag_dispatcher) +def diag(v, k=0): + """ + Extract a diagonal or construct a diagonal array. + + See the more detailed documentation for ``numpy.diagonal`` if you use this + function to extract a diagonal and wish to write to the resulting array; + whether it returns a copy or a view depends on what version of numpy you + are using. + + Parameters + ---------- + v : array_like + If `v` is a 2-D array, return a copy of its `k`-th diagonal. + If `v` is a 1-D array, return a 2-D array with `v` on the `k`-th + diagonal. + k : int, optional + Diagonal in question. The default is 0. Use `k>0` for diagonals + above the main diagonal, and `k<0` for diagonals below the main + diagonal. + + Returns + ------- + out : ndarray + The extracted diagonal or constructed diagonal array. + + See Also + -------- + diagonal : Return specified diagonals. + diagflat : Create a 2-D array with the flattened input as a diagonal. + trace : Sum along diagonals. + triu : Upper triangle of an array. + tril : Lower triangle of an array. + + Examples + -------- + >>> x = np.arange(9).reshape((3,3)) + >>> x + array([[0, 1, 2], + [3, 4, 5], + [6, 7, 8]]) + + >>> np.diag(x) + array([0, 4, 8]) + >>> np.diag(x, k=1) + array([1, 5]) + >>> np.diag(x, k=-1) + array([3, 7]) + + >>> np.diag(np.diag(x)) + array([[0, 0, 0], + [0, 4, 0], + [0, 0, 8]]) + + """ + v = asanyarray(v) + s = v.shape + if len(s) == 1: + n = s[0]+abs(k) + res = zeros((n, n), v.dtype) + if k >= 0: + i = k + else: + i = (-k) * n + res[:n-k].flat[i::n+1] = v + return res + elif len(s) == 2: + return diagonal(v, k) + else: + raise ValueError("Input must be 1- or 2-d.") + + +@array_function_dispatch(_diag_dispatcher) +def diagflat(v, k=0): + """ + Create a two-dimensional array with the flattened input as a diagonal. + + Parameters + ---------- + v : array_like + Input data, which is flattened and set as the `k`-th + diagonal of the output. + k : int, optional + Diagonal to set; 0, the default, corresponds to the "main" diagonal, + a positive (negative) `k` giving the number of the diagonal above + (below) the main. + + Returns + ------- + out : ndarray + The 2-D output array. + + See Also + -------- + diag : MATLAB work-alike for 1-D and 2-D arrays. + diagonal : Return specified diagonals. + trace : Sum along diagonals. + + Examples + -------- + >>> np.diagflat([[1,2], [3,4]]) + array([[1, 0, 0, 0], + [0, 2, 0, 0], + [0, 0, 3, 0], + [0, 0, 0, 4]]) + + >>> np.diagflat([1,2], 1) + array([[0, 1, 0], + [0, 0, 2], + [0, 0, 0]]) + + """ + conv = _array_converter(v) + v, = conv.as_arrays(subok=False) + v = v.ravel() + s = len(v) + n = s + abs(k) + res = zeros((n, n), v.dtype) + if (k >= 0): + i = arange(0, n-k, dtype=intp) + fi = i+k+i*n + else: + i = arange(0, n+k, dtype=intp) + fi = i+(i-k)*n + res.flat[fi] = v + + return conv.wrap(res) + + +@set_array_function_like_doc +@set_module('numpy') +def tri(N, M=None, k=0, dtype=float, *, like=None): + """ + An array with ones at and below the given diagonal and zeros elsewhere. + + Parameters + ---------- + N : int + Number of rows in the array. + M : int, optional + Number of columns in the array. + By default, `M` is taken equal to `N`. + k : int, optional + The sub-diagonal at and below which the array is filled. + `k` = 0 is the main diagonal, while `k` < 0 is below it, + and `k` > 0 is above. The default is 0. + dtype : dtype, optional + Data type of the returned array. The default is float. + ${ARRAY_FUNCTION_LIKE} + + .. versionadded:: 1.20.0 + + Returns + ------- + tri : ndarray of shape (N, M) + Array with its lower triangle filled with ones and zero elsewhere; + in other words ``T[i,j] == 1`` for ``j <= i + k``, 0 otherwise. + + Examples + -------- + >>> np.tri(3, 5, 2, dtype=int) + array([[1, 1, 1, 0, 0], + [1, 1, 1, 1, 0], + [1, 1, 1, 1, 1]]) + + >>> np.tri(3, 5, -1) + array([[0., 0., 0., 0., 0.], + [1., 0., 0., 0., 0.], + [1., 1., 0., 0., 0.]]) + + """ + if like is not None: + return _tri_with_like(like, N, M=M, k=k, dtype=dtype) + + if M is None: + M = N + + m = greater_equal.outer(arange(N, dtype=_min_int(0, N)), + arange(-k, M-k, dtype=_min_int(-k, M - k))) + + # Avoid making a copy if the requested type is already bool + m = m.astype(dtype, copy=False) + + return m + + +_tri_with_like = array_function_dispatch()(tri) + + +def _trilu_dispatcher(m, k=None): + return (m,) + + +@array_function_dispatch(_trilu_dispatcher) +def tril(m, k=0): + """ + Lower triangle of an array. + + Return a copy of an array with elements above the `k`-th diagonal zeroed. + For arrays with ``ndim`` exceeding 2, `tril` will apply to the final two + axes. + + Parameters + ---------- + m : array_like, shape (..., M, N) + Input array. + k : int, optional + Diagonal above which to zero elements. `k = 0` (the default) is the + main diagonal, `k < 0` is below it and `k > 0` is above. + + Returns + ------- + tril : ndarray, shape (..., M, N) + Lower triangle of `m`, of same shape and data-type as `m`. + + See Also + -------- + triu : same thing, only for the upper triangle + + Examples + -------- + >>> np.tril([[1,2,3],[4,5,6],[7,8,9],[10,11,12]], -1) + array([[ 0, 0, 0], + [ 4, 0, 0], + [ 7, 8, 0], + [10, 11, 12]]) + + >>> np.tril(np.arange(3*4*5).reshape(3, 4, 5)) + array([[[ 0, 0, 0, 0, 0], + [ 5, 6, 0, 0, 0], + [10, 11, 12, 0, 0], + [15, 16, 17, 18, 0]], + [[20, 0, 0, 0, 0], + [25, 26, 0, 0, 0], + [30, 31, 32, 0, 0], + [35, 36, 37, 38, 0]], + [[40, 0, 0, 0, 0], + [45, 46, 0, 0, 0], + [50, 51, 52, 0, 0], + [55, 56, 57, 58, 0]]]) + + """ + m = asanyarray(m) + mask = tri(*m.shape[-2:], k=k, dtype=bool) + + return where(mask, m, zeros(1, m.dtype)) + + +@array_function_dispatch(_trilu_dispatcher) +def triu(m, k=0): + """ + Upper triangle of an array. + + Return a copy of an array with the elements below the `k`-th diagonal + zeroed. For arrays with ``ndim`` exceeding 2, `triu` will apply to the + final two axes. + + Please refer to the documentation for `tril` for further details. + + See Also + -------- + tril : lower triangle of an array + + Examples + -------- + >>> np.triu([[1,2,3],[4,5,6],[7,8,9],[10,11,12]], -1) + array([[ 1, 2, 3], + [ 4, 5, 6], + [ 0, 8, 9], + [ 0, 0, 12]]) + + >>> np.triu(np.arange(3*4*5).reshape(3, 4, 5)) + array([[[ 0, 1, 2, 3, 4], + [ 0, 6, 7, 8, 9], + [ 0, 0, 12, 13, 14], + [ 0, 0, 0, 18, 19]], + [[20, 21, 22, 23, 24], + [ 0, 26, 27, 28, 29], + [ 0, 0, 32, 33, 34], + [ 0, 0, 0, 38, 39]], + [[40, 41, 42, 43, 44], + [ 0, 46, 47, 48, 49], + [ 0, 0, 52, 53, 54], + [ 0, 0, 0, 58, 59]]]) + + """ + m = asanyarray(m) + mask = tri(*m.shape[-2:], k=k-1, dtype=bool) + + return where(mask, zeros(1, m.dtype), m) + + +def _vander_dispatcher(x, N=None, increasing=None): + return (x,) + + +# Originally borrowed from John Hunter and matplotlib +@array_function_dispatch(_vander_dispatcher) +def vander(x, N=None, increasing=False): + """ + Generate a Vandermonde matrix. + + The columns of the output matrix are powers of the input vector. The + order of the powers is determined by the `increasing` boolean argument. + Specifically, when `increasing` is False, the `i`-th output column is + the input vector raised element-wise to the power of ``N - i - 1``. Such + a matrix with a geometric progression in each row is named for Alexandre- + Theophile Vandermonde. + + Parameters + ---------- + x : array_like + 1-D input array. + N : int, optional + Number of columns in the output. If `N` is not specified, a square + array is returned (``N = len(x)``). + increasing : bool, optional + Order of the powers of the columns. If True, the powers increase + from left to right, if False (the default) they are reversed. + + .. versionadded:: 1.9.0 + + Returns + ------- + out : ndarray + Vandermonde matrix. If `increasing` is False, the first column is + ``x^(N-1)``, the second ``x^(N-2)`` and so forth. If `increasing` is + True, the columns are ``x^0, x^1, ..., x^(N-1)``. + + See Also + -------- + polynomial.polynomial.polyvander + + Examples + -------- + >>> x = np.array([1, 2, 3, 5]) + >>> N = 3 + >>> np.vander(x, N) + array([[ 1, 1, 1], + [ 4, 2, 1], + [ 9, 3, 1], + [25, 5, 1]]) + + >>> np.column_stack([x**(N-1-i) for i in range(N)]) + array([[ 1, 1, 1], + [ 4, 2, 1], + [ 9, 3, 1], + [25, 5, 1]]) + + >>> x = np.array([1, 2, 3, 5]) + >>> np.vander(x) + array([[ 1, 1, 1, 1], + [ 8, 4, 2, 1], + [ 27, 9, 3, 1], + [125, 25, 5, 1]]) + >>> np.vander(x, increasing=True) + array([[ 1, 1, 1, 1], + [ 1, 2, 4, 8], + [ 1, 3, 9, 27], + [ 1, 5, 25, 125]]) + + The determinant of a square Vandermonde matrix is the product + of the differences between the values of the input vector: + + >>> np.linalg.det(np.vander(x)) + 48.000000000000043 # may vary + >>> (5-3)*(5-2)*(5-1)*(3-2)*(3-1)*(2-1) + 48 + + """ + x = asarray(x) + if x.ndim != 1: + raise ValueError("x must be a one-dimensional array or sequence.") + if N is None: + N = len(x) + + v = empty((len(x), N), dtype=promote_types(x.dtype, int)) + tmp = v[:, ::-1] if not increasing else v + + if N > 0: + tmp[:, 0] = 1 + if N > 1: + tmp[:, 1:] = x[:, None] + multiply.accumulate(tmp[:, 1:], out=tmp[:, 1:], axis=1) + + return v + + +def _histogram2d_dispatcher(x, y, bins=None, range=None, density=None, + weights=None): + yield x + yield y + + # This terrible logic is adapted from the checks in histogram2d + try: + N = len(bins) + except TypeError: + N = 1 + if N == 2: + yield from bins # bins=[x, y] + else: + yield bins + + yield weights + + +@array_function_dispatch(_histogram2d_dispatcher) +def histogram2d(x, y, bins=10, range=None, density=None, weights=None): + """ + Compute the bi-dimensional histogram of two data samples. + + Parameters + ---------- + x : array_like, shape (N,) + An array containing the x coordinates of the points to be + histogrammed. + y : array_like, shape (N,) + An array containing the y coordinates of the points to be + histogrammed. + bins : int or array_like or [int, int] or [array, array], optional + The bin specification: + + * If int, the number of bins for the two dimensions (nx=ny=bins). + * If array_like, the bin edges for the two dimensions + (x_edges=y_edges=bins). + * If [int, int], the number of bins in each dimension + (nx, ny = bins). + * If [array, array], the bin edges in each dimension + (x_edges, y_edges = bins). + * A combination [int, array] or [array, int], where int + is the number of bins and array is the bin edges. + + range : array_like, shape(2,2), optional + The leftmost and rightmost edges of the bins along each dimension + (if not specified explicitly in the `bins` parameters): + ``[[xmin, xmax], [ymin, ymax]]``. All values outside of this range + will be considered outliers and not tallied in the histogram. + density : bool, optional + If False, the default, returns the number of samples in each bin. + If True, returns the probability *density* function at the bin, + ``bin_count / sample_count / bin_area``. + weights : array_like, shape(N,), optional + An array of values ``w_i`` weighing each sample ``(x_i, y_i)``. + Weights are normalized to 1 if `density` is True. If `density` is + False, the values of the returned histogram are equal to the sum of + the weights belonging to the samples falling into each bin. + + Returns + ------- + H : ndarray, shape(nx, ny) + The bi-dimensional histogram of samples `x` and `y`. Values in `x` + are histogrammed along the first dimension and values in `y` are + histogrammed along the second dimension. + xedges : ndarray, shape(nx+1,) + The bin edges along the first dimension. + yedges : ndarray, shape(ny+1,) + The bin edges along the second dimension. + + See Also + -------- + histogram : 1D histogram + histogramdd : Multidimensional histogram + + Notes + ----- + When `density` is True, then the returned histogram is the sample + density, defined such that the sum over bins of the product + ``bin_value * bin_area`` is 1. + + Please note that the histogram does not follow the Cartesian convention + where `x` values are on the abscissa and `y` values on the ordinate + axis. Rather, `x` is histogrammed along the first dimension of the + array (vertical), and `y` along the second dimension of the array + (horizontal). This ensures compatibility with `histogramdd`. + + Examples + -------- + >>> from matplotlib.image import NonUniformImage + >>> import matplotlib.pyplot as plt + + Construct a 2-D histogram with variable bin width. First define the bin + edges: + + >>> xedges = [0, 1, 3, 5] + >>> yedges = [0, 2, 3, 4, 6] + + Next we create a histogram H with random bin content: + + >>> x = np.random.normal(2, 1, 100) + >>> y = np.random.normal(1, 1, 100) + >>> H, xedges, yedges = np.histogram2d(x, y, bins=(xedges, yedges)) + >>> # Histogram does not follow Cartesian convention (see Notes), + >>> # therefore transpose H for visualization purposes. + >>> H = H.T + + :func:`imshow ` can only display square bins: + + >>> fig = plt.figure(figsize=(7, 3)) + >>> ax = fig.add_subplot(131, title='imshow: square bins') + >>> plt.imshow(H, interpolation='nearest', origin='lower', + ... extent=[xedges[0], xedges[-1], yedges[0], yedges[-1]]) + + + :func:`pcolormesh ` can display actual edges: + + >>> ax = fig.add_subplot(132, title='pcolormesh: actual edges', + ... aspect='equal') + >>> X, Y = np.meshgrid(xedges, yedges) + >>> ax.pcolormesh(X, Y, H) + + + :class:`NonUniformImage ` can be used to + display actual bin edges with interpolation: + + >>> ax = fig.add_subplot(133, title='NonUniformImage: interpolated', + ... aspect='equal', xlim=xedges[[0, -1]], ylim=yedges[[0, -1]]) + >>> im = NonUniformImage(ax, interpolation='bilinear') + >>> xcenters = (xedges[:-1] + xedges[1:]) / 2 + >>> ycenters = (yedges[:-1] + yedges[1:]) / 2 + >>> im.set_data(xcenters, ycenters, H) + >>> ax.add_image(im) + >>> plt.show() + + It is also possible to construct a 2-D histogram without specifying bin + edges: + + >>> # Generate non-symmetric test data + >>> n = 10000 + >>> x = np.linspace(1, 100, n) + >>> y = 2*np.log(x) + np.random.rand(n) - 0.5 + >>> # Compute 2d histogram. Note the order of x/y and xedges/yedges + >>> H, yedges, xedges = np.histogram2d(y, x, bins=20) + + Now we can plot the histogram using + :func:`pcolormesh `, and a + :func:`hexbin ` for comparison. + + >>> # Plot histogram using pcolormesh + >>> fig, (ax1, ax2) = plt.subplots(ncols=2, sharey=True) + >>> ax1.pcolormesh(xedges, yedges, H, cmap='rainbow') + >>> ax1.plot(x, 2*np.log(x), 'k-') + >>> ax1.set_xlim(x.min(), x.max()) + >>> ax1.set_ylim(y.min(), y.max()) + >>> ax1.set_xlabel('x') + >>> ax1.set_ylabel('y') + >>> ax1.set_title('histogram2d') + >>> ax1.grid() + + >>> # Create hexbin plot for comparison + >>> ax2.hexbin(x, y, gridsize=20, cmap='rainbow') + >>> ax2.plot(x, 2*np.log(x), 'k-') + >>> ax2.set_title('hexbin') + >>> ax2.set_xlim(x.min(), x.max()) + >>> ax2.set_xlabel('x') + >>> ax2.grid() + + >>> plt.show() + """ + from numpy import histogramdd + + if len(x) != len(y): + raise ValueError('x and y must have the same length.') + + try: + N = len(bins) + except TypeError: + N = 1 + + if N != 1 and N != 2: + xedges = yedges = asarray(bins) + bins = [xedges, yedges] + hist, edges = histogramdd([x, y], bins, range, density, weights) + return hist, edges[0], edges[1] + + +@set_module('numpy') +def mask_indices(n, mask_func, k=0): + """ + Return the indices to access (n, n) arrays, given a masking function. + + Assume `mask_func` is a function that, for a square array a of size + ``(n, n)`` with a possible offset argument `k`, when called as + ``mask_func(a, k)`` returns a new array with zeros in certain locations + (functions like `triu` or `tril` do precisely this). Then this function + returns the indices where the non-zero values would be located. + + Parameters + ---------- + n : int + The returned indices will be valid to access arrays of shape (n, n). + mask_func : callable + A function whose call signature is similar to that of `triu`, `tril`. + That is, ``mask_func(x, k)`` returns a boolean array, shaped like `x`. + `k` is an optional argument to the function. + k : scalar + An optional argument which is passed through to `mask_func`. Functions + like `triu`, `tril` take a second argument that is interpreted as an + offset. + + Returns + ------- + indices : tuple of arrays. + The `n` arrays of indices corresponding to the locations where + ``mask_func(np.ones((n, n)), k)`` is True. + + See Also + -------- + triu, tril, triu_indices, tril_indices + + Notes + ----- + .. versionadded:: 1.4.0 + + Examples + -------- + These are the indices that would allow you to access the upper triangular + part of any 3x3 array: + + >>> iu = np.mask_indices(3, np.triu) + + For example, if `a` is a 3x3 array: + + >>> a = np.arange(9).reshape(3, 3) + >>> a + array([[0, 1, 2], + [3, 4, 5], + [6, 7, 8]]) + >>> a[iu] + array([0, 1, 2, 4, 5, 8]) + + An offset can be passed also to the masking function. This gets us the + indices starting on the first diagonal right of the main one: + + >>> iu1 = np.mask_indices(3, np.triu, 1) + + with which we now extract only three elements: + + >>> a[iu1] + array([1, 2, 5]) + + """ + m = ones((n, n), int) + a = mask_func(m, k) + return nonzero(a != 0) + + +@set_module('numpy') +def tril_indices(n, k=0, m=None): + """ + Return the indices for the lower-triangle of an (n, m) array. + + Parameters + ---------- + n : int + The row dimension of the arrays for which the returned + indices will be valid. + k : int, optional + Diagonal offset (see `tril` for details). + m : int, optional + .. versionadded:: 1.9.0 + + The column dimension of the arrays for which the returned + arrays will be valid. + By default `m` is taken equal to `n`. + + + Returns + ------- + inds : tuple of arrays + The indices for the triangle. The returned tuple contains two arrays, + each with the indices along one dimension of the array. + + See also + -------- + triu_indices : similar function, for upper-triangular. + mask_indices : generic function accepting an arbitrary mask function. + tril, triu + + Notes + ----- + .. versionadded:: 1.4.0 + + Examples + -------- + Compute two different sets of indices to access 4x4 arrays, one for the + lower triangular part starting at the main diagonal, and one starting two + diagonals further right: + + >>> il1 = np.tril_indices(4) + >>> il2 = np.tril_indices(4, 2) + + Here is how they can be used with a sample array: + + >>> a = np.arange(16).reshape(4, 4) + >>> a + array([[ 0, 1, 2, 3], + [ 4, 5, 6, 7], + [ 8, 9, 10, 11], + [12, 13, 14, 15]]) + + Both for indexing: + + >>> a[il1] + array([ 0, 4, 5, ..., 13, 14, 15]) + + And for assigning values: + + >>> a[il1] = -1 + >>> a + array([[-1, 1, 2, 3], + [-1, -1, 6, 7], + [-1, -1, -1, 11], + [-1, -1, -1, -1]]) + + These cover almost the whole array (two diagonals right of the main one): + + >>> a[il2] = -10 + >>> a + array([[-10, -10, -10, 3], + [-10, -10, -10, -10], + [-10, -10, -10, -10], + [-10, -10, -10, -10]]) + + """ + tri_ = tri(n, m, k=k, dtype=bool) + + return tuple(broadcast_to(inds, tri_.shape)[tri_] + for inds in indices(tri_.shape, sparse=True)) + + +def _trilu_indices_form_dispatcher(arr, k=None): + return (arr,) + + +@array_function_dispatch(_trilu_indices_form_dispatcher) +def tril_indices_from(arr, k=0): + """ + Return the indices for the lower-triangle of arr. + + See `tril_indices` for full details. + + Parameters + ---------- + arr : array_like + The indices will be valid for square arrays whose dimensions are + the same as arr. + k : int, optional + Diagonal offset (see `tril` for details). + + Examples + -------- + + Create a 4 by 4 array. + + >>> a = np.arange(16).reshape(4, 4) + >>> a + array([[ 0, 1, 2, 3], + [ 4, 5, 6, 7], + [ 8, 9, 10, 11], + [12, 13, 14, 15]]) + + Pass the array to get the indices of the lower triangular elements. + + >>> trili = np.tril_indices_from(a) + >>> trili + (array([0, 1, 1, 2, 2, 2, 3, 3, 3, 3]), array([0, 0, 1, 0, 1, 2, 0, 1, 2, 3])) + + >>> a[trili] + array([ 0, 4, 5, 8, 9, 10, 12, 13, 14, 15]) + + This is syntactic sugar for tril_indices(). + + >>> np.tril_indices(a.shape[0]) + (array([0, 1, 1, 2, 2, 2, 3, 3, 3, 3]), array([0, 0, 1, 0, 1, 2, 0, 1, 2, 3])) + + Use the `k` parameter to return the indices for the lower triangular array + up to the k-th diagonal. + + >>> trili1 = np.tril_indices_from(a, k=1) + >>> a[trili1] + array([ 0, 1, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 15]) + + See Also + -------- + tril_indices, tril, triu_indices_from + + Notes + ----- + .. versionadded:: 1.4.0 + + """ + if arr.ndim != 2: + raise ValueError("input array must be 2-d") + return tril_indices(arr.shape[-2], k=k, m=arr.shape[-1]) + + +@set_module('numpy') +def triu_indices(n, k=0, m=None): + """ + Return the indices for the upper-triangle of an (n, m) array. + + Parameters + ---------- + n : int + The size of the arrays for which the returned indices will + be valid. + k : int, optional + Diagonal offset (see `triu` for details). + m : int, optional + .. versionadded:: 1.9.0 + + The column dimension of the arrays for which the returned + arrays will be valid. + By default `m` is taken equal to `n`. + + + Returns + ------- + inds : tuple, shape(2) of ndarrays, shape(`n`) + The indices for the triangle. The returned tuple contains two arrays, + each with the indices along one dimension of the array. Can be used + to slice a ndarray of shape(`n`, `n`). + + See also + -------- + tril_indices : similar function, for lower-triangular. + mask_indices : generic function accepting an arbitrary mask function. + triu, tril + + Notes + ----- + .. versionadded:: 1.4.0 + + Examples + -------- + Compute two different sets of indices to access 4x4 arrays, one for the + upper triangular part starting at the main diagonal, and one starting two + diagonals further right: + + >>> iu1 = np.triu_indices(4) + >>> iu2 = np.triu_indices(4, 2) + + Here is how they can be used with a sample array: + + >>> a = np.arange(16).reshape(4, 4) + >>> a + array([[ 0, 1, 2, 3], + [ 4, 5, 6, 7], + [ 8, 9, 10, 11], + [12, 13, 14, 15]]) + + Both for indexing: + + >>> a[iu1] + array([ 0, 1, 2, ..., 10, 11, 15]) + + And for assigning values: + + >>> a[iu1] = -1 + >>> a + array([[-1, -1, -1, -1], + [ 4, -1, -1, -1], + [ 8, 9, -1, -1], + [12, 13, 14, -1]]) + + These cover only a small part of the whole array (two diagonals right + of the main one): + + >>> a[iu2] = -10 + >>> a + array([[ -1, -1, -10, -10], + [ 4, -1, -1, -10], + [ 8, 9, -1, -1], + [ 12, 13, 14, -1]]) + + """ + tri_ = ~tri(n, m, k=k - 1, dtype=bool) + + return tuple(broadcast_to(inds, tri_.shape)[tri_] + for inds in indices(tri_.shape, sparse=True)) + + +@array_function_dispatch(_trilu_indices_form_dispatcher) +def triu_indices_from(arr, k=0): + """ + Return the indices for the upper-triangle of arr. + + See `triu_indices` for full details. + + Parameters + ---------- + arr : ndarray, shape(N, N) + The indices will be valid for square arrays. + k : int, optional + Diagonal offset (see `triu` for details). + + Returns + ------- + triu_indices_from : tuple, shape(2) of ndarray, shape(N) + Indices for the upper-triangle of `arr`. + + Examples + -------- + + Create a 4 by 4 array. + + >>> a = np.arange(16).reshape(4, 4) + >>> a + array([[ 0, 1, 2, 3], + [ 4, 5, 6, 7], + [ 8, 9, 10, 11], + [12, 13, 14, 15]]) + + Pass the array to get the indices of the upper triangular elements. + + >>> triui = np.triu_indices_from(a) + >>> triui + (array([0, 0, 0, 0, 1, 1, 1, 2, 2, 3]), array([0, 1, 2, 3, 1, 2, 3, 2, 3, 3])) + + >>> a[triui] + array([ 0, 1, 2, 3, 5, 6, 7, 10, 11, 15]) + + This is syntactic sugar for triu_indices(). + + >>> np.triu_indices(a.shape[0]) + (array([0, 0, 0, 0, 1, 1, 1, 2, 2, 3]), array([0, 1, 2, 3, 1, 2, 3, 2, 3, 3])) + + Use the `k` parameter to return the indices for the upper triangular array + from the k-th diagonal. + + >>> triuim1 = np.triu_indices_from(a, k=1) + >>> a[triuim1] + array([ 1, 2, 3, 6, 7, 11]) + + + See Also + -------- + triu_indices, triu, tril_indices_from + + Notes + ----- + .. versionadded:: 1.4.0 + + """ + if arr.ndim != 2: + raise ValueError("input array must be 2-d") + return triu_indices(arr.shape[-2], k=k, m=arr.shape[-1]) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_twodim_base_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_twodim_base_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..4096976871d7b1a6bdda4e4336f4869bb7d315f1 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_twodim_base_impl.pyi @@ -0,0 +1,243 @@ +import builtins +from collections.abc import Callable, Sequence +from typing import ( + Any, + overload, + TypeVar, + Literal as L, +) + +import numpy as np +from numpy import ( + generic, + number, + timedelta64, + datetime64, + int_, + intp, + float64, + signedinteger, + floating, + complexfloating, + object_, + _OrderCF, +) + +from numpy._typing import ( + DTypeLike, + _DTypeLike, + ArrayLike, + _ArrayLike, + NDArray, + _SupportsArrayFunc, + _ArrayLikeInt_co, + _ArrayLikeFloat_co, + _ArrayLikeComplex_co, + _ArrayLikeObject_co, +) + +_T = TypeVar("_T") +_SCT = TypeVar("_SCT", bound=generic) + +# The returned arrays dtype must be compatible with `np.equal` +_MaskFunc = Callable[ + [NDArray[int_], _T], + NDArray[number[Any] | np.bool | timedelta64 | datetime64 | object_], +] + +__all__: list[str] + +@overload +def fliplr(m: _ArrayLike[_SCT]) -> NDArray[_SCT]: ... +@overload +def fliplr(m: ArrayLike) -> NDArray[Any]: ... + +@overload +def flipud(m: _ArrayLike[_SCT]) -> NDArray[_SCT]: ... +@overload +def flipud(m: ArrayLike) -> NDArray[Any]: ... + +@overload +def eye( + N: int, + M: None | int = ..., + k: int = ..., + dtype: None = ..., + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[float64]: ... +@overload +def eye( + N: int, + M: None | int = ..., + k: int = ..., + dtype: _DTypeLike[_SCT] = ..., + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[_SCT]: ... +@overload +def eye( + N: int, + M: None | int = ..., + k: int = ..., + dtype: DTypeLike = ..., + order: _OrderCF = ..., + *, + device: None | L["cpu"] = ..., + like: None | _SupportsArrayFunc = ..., +) -> NDArray[Any]: ... + +@overload +def diag(v: _ArrayLike[_SCT], k: int = ...) -> NDArray[_SCT]: ... +@overload +def diag(v: ArrayLike, k: int = ...) -> NDArray[Any]: ... + +@overload +def diagflat(v: _ArrayLike[_SCT], k: int = ...) -> NDArray[_SCT]: ... +@overload +def diagflat(v: ArrayLike, k: int = ...) -> NDArray[Any]: ... + +@overload +def tri( + N: int, + M: None | int = ..., + k: int = ..., + dtype: None = ..., + *, + like: None | _SupportsArrayFunc = ... +) -> NDArray[float64]: ... +@overload +def tri( + N: int, + M: None | int = ..., + k: int = ..., + dtype: _DTypeLike[_SCT] = ..., + *, + like: None | _SupportsArrayFunc = ... +) -> NDArray[_SCT]: ... +@overload +def tri( + N: int, + M: None | int = ..., + k: int = ..., + dtype: DTypeLike = ..., + *, + like: None | _SupportsArrayFunc = ... +) -> NDArray[Any]: ... + +@overload +def tril(v: _ArrayLike[_SCT], k: int = ...) -> NDArray[_SCT]: ... +@overload +def tril(v: ArrayLike, k: int = ...) -> NDArray[Any]: ... + +@overload +def triu(v: _ArrayLike[_SCT], k: int = ...) -> NDArray[_SCT]: ... +@overload +def triu(v: ArrayLike, k: int = ...) -> NDArray[Any]: ... + +@overload +def vander( # type: ignore[misc] + x: _ArrayLikeInt_co, + N: None | int = ..., + increasing: bool = ..., +) -> NDArray[signedinteger[Any]]: ... +@overload +def vander( # type: ignore[misc] + x: _ArrayLikeFloat_co, + N: None | int = ..., + increasing: bool = ..., +) -> NDArray[floating[Any]]: ... +@overload +def vander( + x: _ArrayLikeComplex_co, + N: None | int = ..., + increasing: bool = ..., +) -> NDArray[complexfloating[Any, Any]]: ... +@overload +def vander( + x: _ArrayLikeObject_co, + N: None | int = ..., + increasing: bool = ..., +) -> NDArray[object_]: ... + +@overload +def histogram2d( # type: ignore[misc] + x: _ArrayLikeFloat_co, + y: _ArrayLikeFloat_co, + bins: int | Sequence[int] = ..., + range: None | _ArrayLikeFloat_co = ..., + density: None | bool = ..., + weights: None | _ArrayLikeFloat_co = ..., +) -> tuple[ + NDArray[float64], + NDArray[floating[Any]], + NDArray[floating[Any]], +]: ... +@overload +def histogram2d( + x: _ArrayLikeComplex_co, + y: _ArrayLikeComplex_co, + bins: int | Sequence[int] = ..., + range: None | _ArrayLikeFloat_co = ..., + density: None | bool = ..., + weights: None | _ArrayLikeFloat_co = ..., +) -> tuple[ + NDArray[float64], + NDArray[complexfloating[Any, Any]], + NDArray[complexfloating[Any, Any]], +]: ... +@overload # TODO: Sort out `bins` +def histogram2d( + x: _ArrayLikeComplex_co, + y: _ArrayLikeComplex_co, + bins: Sequence[_ArrayLikeInt_co], + range: None | _ArrayLikeFloat_co = ..., + density: None | bool = ..., + weights: None | _ArrayLikeFloat_co = ..., +) -> tuple[ + NDArray[float64], + NDArray[Any], + NDArray[Any], +]: ... + +# NOTE: we're assuming/demanding here the `mask_func` returns +# an ndarray of shape `(n, n)`; otherwise there is the possibility +# of the output tuple having more or less than 2 elements +@overload +def mask_indices( + n: int, + mask_func: _MaskFunc[int], + k: int = ..., +) -> tuple[NDArray[intp], NDArray[intp]]: ... +@overload +def mask_indices( + n: int, + mask_func: _MaskFunc[_T], + k: _T, +) -> tuple[NDArray[intp], NDArray[intp]]: ... + +def tril_indices( + n: int, + k: int = ..., + m: None | int = ..., +) -> tuple[NDArray[int_], NDArray[int_]]: ... + +def tril_indices_from( + arr: NDArray[Any], + k: int = ..., +) -> tuple[NDArray[int_], NDArray[int_]]: ... + +def triu_indices( + n: int, + k: int = ..., + m: None | int = ..., +) -> tuple[NDArray[int_], NDArray[int_]]: ... + +def triu_indices_from( + arr: NDArray[Any], + k: int = ..., +) -> tuple[NDArray[int_], NDArray[int_]]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_type_check_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_type_check_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..2e4ef4e6954a19108991049c8a1b22c6d0b87b4a --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_type_check_impl.py @@ -0,0 +1,699 @@ +"""Automatically adapted for numpy Sep 19, 2005 by convertcode.py + +""" +import functools + +__all__ = ['iscomplexobj', 'isrealobj', 'imag', 'iscomplex', + 'isreal', 'nan_to_num', 'real', 'real_if_close', + 'typename', 'mintypecode', + 'common_type'] + +from .._utils import set_module +import numpy._core.numeric as _nx +from numpy._core.numeric import asarray, asanyarray, isnan, zeros +from numpy._core import overrides, getlimits +from ._ufunclike_impl import isneginf, isposinf + + +array_function_dispatch = functools.partial( + overrides.array_function_dispatch, module='numpy') + + +_typecodes_by_elsize = 'GDFgdfQqLlIiHhBb?' + + +@set_module('numpy') +def mintypecode(typechars, typeset='GDFgdf', default='d'): + """ + Return the character for the minimum-size type to which given types can + be safely cast. + + The returned type character must represent the smallest size dtype such + that an array of the returned type can handle the data from an array of + all types in `typechars` (or if `typechars` is an array, then its + dtype.char). + + Parameters + ---------- + typechars : list of str or array_like + If a list of strings, each string should represent a dtype. + If array_like, the character representation of the array dtype is used. + typeset : str or list of str, optional + The set of characters that the returned character is chosen from. + The default set is 'GDFgdf'. + default : str, optional + The default character, this is returned if none of the characters in + `typechars` matches a character in `typeset`. + + Returns + ------- + typechar : str + The character representing the minimum-size type that was found. + + See Also + -------- + dtype + + Examples + -------- + >>> np.mintypecode(['d', 'f', 'S']) + 'd' + >>> x = np.array([1.1, 2-3.j]) + >>> np.mintypecode(x) + 'D' + + >>> np.mintypecode('abceh', default='G') + 'G' + + """ + typecodes = ((isinstance(t, str) and t) or asarray(t).dtype.char + for t in typechars) + intersection = set(t for t in typecodes if t in typeset) + if not intersection: + return default + if 'F' in intersection and 'd' in intersection: + return 'D' + return min(intersection, key=_typecodes_by_elsize.index) + + +def _real_dispatcher(val): + return (val,) + + +@array_function_dispatch(_real_dispatcher) +def real(val): + """ + Return the real part of the complex argument. + + Parameters + ---------- + val : array_like + Input array. + + Returns + ------- + out : ndarray or scalar + The real component of the complex argument. If `val` is real, the type + of `val` is used for the output. If `val` has complex elements, the + returned type is float. + + See Also + -------- + real_if_close, imag, angle + + Examples + -------- + >>> a = np.array([1+2j, 3+4j, 5+6j]) + >>> a.real + array([1., 3., 5.]) + >>> a.real = 9 + >>> a + array([9.+2.j, 9.+4.j, 9.+6.j]) + >>> a.real = np.array([9, 8, 7]) + >>> a + array([9.+2.j, 8.+4.j, 7.+6.j]) + >>> np.real(1 + 1j) + 1.0 + + """ + try: + return val.real + except AttributeError: + return asanyarray(val).real + + +def _imag_dispatcher(val): + return (val,) + + +@array_function_dispatch(_imag_dispatcher) +def imag(val): + """ + Return the imaginary part of the complex argument. + + Parameters + ---------- + val : array_like + Input array. + + Returns + ------- + out : ndarray or scalar + The imaginary component of the complex argument. If `val` is real, + the type of `val` is used for the output. If `val` has complex + elements, the returned type is float. + + See Also + -------- + real, angle, real_if_close + + Examples + -------- + >>> a = np.array([1+2j, 3+4j, 5+6j]) + >>> a.imag + array([2., 4., 6.]) + >>> a.imag = np.array([8, 10, 12]) + >>> a + array([1. +8.j, 3.+10.j, 5.+12.j]) + >>> np.imag(1 + 1j) + 1.0 + + """ + try: + return val.imag + except AttributeError: + return asanyarray(val).imag + + +def _is_type_dispatcher(x): + return (x,) + + +@array_function_dispatch(_is_type_dispatcher) +def iscomplex(x): + """ + Returns a bool array, where True if input element is complex. + + What is tested is whether the input has a non-zero imaginary part, not if + the input type is complex. + + Parameters + ---------- + x : array_like + Input array. + + Returns + ------- + out : ndarray of bools + Output array. + + See Also + -------- + isreal + iscomplexobj : Return True if x is a complex type or an array of complex + numbers. + + Examples + -------- + >>> np.iscomplex([1+1j, 1+0j, 4.5, 3, 2, 2j]) + array([ True, False, False, False, False, True]) + + """ + ax = asanyarray(x) + if issubclass(ax.dtype.type, _nx.complexfloating): + return ax.imag != 0 + res = zeros(ax.shape, bool) + return res[()] # convert to scalar if needed + + +@array_function_dispatch(_is_type_dispatcher) +def isreal(x): + """ + Returns a bool array, where True if input element is real. + + If element has complex type with zero imaginary part, the return value + for that element is True. + + Parameters + ---------- + x : array_like + Input array. + + Returns + ------- + out : ndarray, bool + Boolean array of same shape as `x`. + + Notes + ----- + `isreal` may behave unexpectedly for string or object arrays (see examples) + + See Also + -------- + iscomplex + isrealobj : Return True if x is not a complex type. + + Examples + -------- + >>> a = np.array([1+1j, 1+0j, 4.5, 3, 2, 2j], dtype=complex) + >>> np.isreal(a) + array([False, True, True, True, True, False]) + + The function does not work on string arrays. + + >>> a = np.array([2j, "a"], dtype="U") + >>> np.isreal(a) # Warns about non-elementwise comparison + False + + Returns True for all elements in input array of ``dtype=object`` even if + any of the elements is complex. + + >>> a = np.array([1, "2", 3+4j], dtype=object) + >>> np.isreal(a) + array([ True, True, True]) + + isreal should not be used with object arrays + + >>> a = np.array([1+2j, 2+1j], dtype=object) + >>> np.isreal(a) + array([ True, True]) + + """ + return imag(x) == 0 + + +@array_function_dispatch(_is_type_dispatcher) +def iscomplexobj(x): + """ + Check for a complex type or an array of complex numbers. + + The type of the input is checked, not the value. Even if the input + has an imaginary part equal to zero, `iscomplexobj` evaluates to True. + + Parameters + ---------- + x : any + The input can be of any type and shape. + + Returns + ------- + iscomplexobj : bool + The return value, True if `x` is of a complex type or has at least + one complex element. + + See Also + -------- + isrealobj, iscomplex + + Examples + -------- + >>> np.iscomplexobj(1) + False + >>> np.iscomplexobj(1+0j) + True + >>> np.iscomplexobj([3, 1+0j, True]) + True + + """ + try: + dtype = x.dtype + type_ = dtype.type + except AttributeError: + type_ = asarray(x).dtype.type + return issubclass(type_, _nx.complexfloating) + + +@array_function_dispatch(_is_type_dispatcher) +def isrealobj(x): + """ + Return True if x is a not complex type or an array of complex numbers. + + The type of the input is checked, not the value. So even if the input + has an imaginary part equal to zero, `isrealobj` evaluates to False + if the data type is complex. + + Parameters + ---------- + x : any + The input can be of any type and shape. + + Returns + ------- + y : bool + The return value, False if `x` is of a complex type. + + See Also + -------- + iscomplexobj, isreal + + Notes + ----- + The function is only meant for arrays with numerical values but it + accepts all other objects. Since it assumes array input, the return + value of other objects may be True. + + >>> np.isrealobj('A string') + True + >>> np.isrealobj(False) + True + >>> np.isrealobj(None) + True + + Examples + -------- + >>> np.isrealobj(1) + True + >>> np.isrealobj(1+0j) + False + >>> np.isrealobj([3, 1+0j, True]) + False + + """ + return not iscomplexobj(x) + +#----------------------------------------------------------------------------- + +def _getmaxmin(t): + from numpy._core import getlimits + f = getlimits.finfo(t) + return f.max, f.min + + +def _nan_to_num_dispatcher(x, copy=None, nan=None, posinf=None, neginf=None): + return (x,) + + +@array_function_dispatch(_nan_to_num_dispatcher) +def nan_to_num(x, copy=True, nan=0.0, posinf=None, neginf=None): + """ + Replace NaN with zero and infinity with large finite numbers (default + behaviour) or with the numbers defined by the user using the `nan`, + `posinf` and/or `neginf` keywords. + + If `x` is inexact, NaN is replaced by zero or by the user defined value in + `nan` keyword, infinity is replaced by the largest finite floating point + values representable by ``x.dtype`` or by the user defined value in + `posinf` keyword and -infinity is replaced by the most negative finite + floating point values representable by ``x.dtype`` or by the user defined + value in `neginf` keyword. + + For complex dtypes, the above is applied to each of the real and + imaginary components of `x` separately. + + If `x` is not inexact, then no replacements are made. + + Parameters + ---------- + x : scalar or array_like + Input data. + copy : bool, optional + Whether to create a copy of `x` (True) or to replace values + in-place (False). The in-place operation only occurs if + casting to an array does not require a copy. + Default is True. + + .. versionadded:: 1.13 + nan : int, float, optional + Value to be used to fill NaN values. If no value is passed + then NaN values will be replaced with 0.0. + + .. versionadded:: 1.17 + posinf : int, float, optional + Value to be used to fill positive infinity values. If no value is + passed then positive infinity values will be replaced with a very + large number. + + .. versionadded:: 1.17 + neginf : int, float, optional + Value to be used to fill negative infinity values. If no value is + passed then negative infinity values will be replaced with a very + small (or negative) number. + + .. versionadded:: 1.17 + + + + Returns + ------- + out : ndarray + `x`, with the non-finite values replaced. If `copy` is False, this may + be `x` itself. + + See Also + -------- + isinf : Shows which elements are positive or negative infinity. + isneginf : Shows which elements are negative infinity. + isposinf : Shows which elements are positive infinity. + isnan : Shows which elements are Not a Number (NaN). + isfinite : Shows which elements are finite (not NaN, not infinity) + + Notes + ----- + NumPy uses the IEEE Standard for Binary Floating-Point for Arithmetic + (IEEE 754). This means that Not a Number is not equivalent to infinity. + + Examples + -------- + >>> np.nan_to_num(np.inf) + 1.7976931348623157e+308 + >>> np.nan_to_num(-np.inf) + -1.7976931348623157e+308 + >>> np.nan_to_num(np.nan) + 0.0 + >>> x = np.array([np.inf, -np.inf, np.nan, -128, 128]) + >>> np.nan_to_num(x) + array([ 1.79769313e+308, -1.79769313e+308, 0.00000000e+000, # may vary + -1.28000000e+002, 1.28000000e+002]) + >>> np.nan_to_num(x, nan=-9999, posinf=33333333, neginf=33333333) + array([ 3.3333333e+07, 3.3333333e+07, -9.9990000e+03, + -1.2800000e+02, 1.2800000e+02]) + >>> y = np.array([complex(np.inf, np.nan), np.nan, complex(np.nan, np.inf)]) + array([ 1.79769313e+308, -1.79769313e+308, 0.00000000e+000, # may vary + -1.28000000e+002, 1.28000000e+002]) + >>> np.nan_to_num(y) + array([ 1.79769313e+308 +0.00000000e+000j, # may vary + 0.00000000e+000 +0.00000000e+000j, + 0.00000000e+000 +1.79769313e+308j]) + >>> np.nan_to_num(y, nan=111111, posinf=222222) + array([222222.+111111.j, 111111. +0.j, 111111.+222222.j]) + """ + x = _nx.array(x, subok=True, copy=copy) + xtype = x.dtype.type + + isscalar = (x.ndim == 0) + + if not issubclass(xtype, _nx.inexact): + return x[()] if isscalar else x + + iscomplex = issubclass(xtype, _nx.complexfloating) + + dest = (x.real, x.imag) if iscomplex else (x,) + maxf, minf = _getmaxmin(x.real.dtype) + if posinf is not None: + maxf = posinf + if neginf is not None: + minf = neginf + for d in dest: + idx_nan = isnan(d) + idx_posinf = isposinf(d) + idx_neginf = isneginf(d) + _nx.copyto(d, nan, where=idx_nan) + _nx.copyto(d, maxf, where=idx_posinf) + _nx.copyto(d, minf, where=idx_neginf) + return x[()] if isscalar else x + +#----------------------------------------------------------------------------- + +def _real_if_close_dispatcher(a, tol=None): + return (a,) + + +@array_function_dispatch(_real_if_close_dispatcher) +def real_if_close(a, tol=100): + """ + If input is complex with all imaginary parts close to zero, return + real parts. + + "Close to zero" is defined as `tol` * (machine epsilon of the type for + `a`). + + Parameters + ---------- + a : array_like + Input array. + tol : float + Tolerance in machine epsilons for the complex part of the elements + in the array. If the tolerance is <=1, then the absolute tolerance + is used. + + Returns + ------- + out : ndarray + If `a` is real, the type of `a` is used for the output. If `a` + has complex elements, the returned type is float. + + See Also + -------- + real, imag, angle + + Notes + ----- + Machine epsilon varies from machine to machine and between data types + but Python floats on most platforms have a machine epsilon equal to + 2.2204460492503131e-16. You can use 'np.finfo(float).eps' to print + out the machine epsilon for floats. + + Examples + -------- + >>> np.finfo(float).eps + 2.2204460492503131e-16 # may vary + + >>> np.real_if_close([2.1 + 4e-14j, 5.2 + 3e-15j], tol=1000) + array([2.1, 5.2]) + >>> np.real_if_close([2.1 + 4e-13j, 5.2 + 3e-15j], tol=1000) + array([2.1+4.e-13j, 5.2 + 3e-15j]) + + """ + a = asanyarray(a) + type_ = a.dtype.type + if not issubclass(type_, _nx.complexfloating): + return a + if tol > 1: + f = getlimits.finfo(type_) + tol = f.eps * tol + if _nx.all(_nx.absolute(a.imag) < tol): + a = a.real + return a + + +#----------------------------------------------------------------------------- + +_namefromtype = {'S1': 'character', + '?': 'bool', + 'b': 'signed char', + 'B': 'unsigned char', + 'h': 'short', + 'H': 'unsigned short', + 'i': 'integer', + 'I': 'unsigned integer', + 'l': 'long integer', + 'L': 'unsigned long integer', + 'q': 'long long integer', + 'Q': 'unsigned long long integer', + 'f': 'single precision', + 'd': 'double precision', + 'g': 'long precision', + 'F': 'complex single precision', + 'D': 'complex double precision', + 'G': 'complex long double precision', + 'S': 'string', + 'U': 'unicode', + 'V': 'void', + 'O': 'object' + } + +@set_module('numpy') +def typename(char): + """ + Return a description for the given data type code. + + Parameters + ---------- + char : str + Data type code. + + Returns + ------- + out : str + Description of the input data type code. + + See Also + -------- + dtype + + Examples + -------- + >>> typechars = ['S1', '?', 'B', 'D', 'G', 'F', 'I', 'H', 'L', 'O', 'Q', + ... 'S', 'U', 'V', 'b', 'd', 'g', 'f', 'i', 'h', 'l', 'q'] + >>> for typechar in typechars: + ... print(typechar, ' : ', np.typename(typechar)) + ... + S1 : character + ? : bool + B : unsigned char + D : complex double precision + G : complex long double precision + F : complex single precision + I : unsigned integer + H : unsigned short + L : unsigned long integer + O : object + Q : unsigned long long integer + S : string + U : unicode + V : void + b : signed char + d : double precision + g : long precision + f : single precision + i : integer + h : short + l : long integer + q : long long integer + + """ + return _namefromtype[char] + +#----------------------------------------------------------------------------- + + +#determine the "minimum common type" for a group of arrays. +array_type = [[_nx.float16, _nx.float32, _nx.float64, _nx.longdouble], + [None, _nx.complex64, _nx.complex128, _nx.clongdouble]] +array_precision = {_nx.float16: 0, + _nx.float32: 1, + _nx.float64: 2, + _nx.longdouble: 3, + _nx.complex64: 1, + _nx.complex128: 2, + _nx.clongdouble: 3} + + +def _common_type_dispatcher(*arrays): + return arrays + + +@array_function_dispatch(_common_type_dispatcher) +def common_type(*arrays): + """ + Return a scalar type which is common to the input arrays. + + The return type will always be an inexact (i.e. floating point) scalar + type, even if all the arrays are integer arrays. If one of the inputs is + an integer array, the minimum precision type that is returned is a + 64-bit floating point dtype. + + All input arrays except int64 and uint64 can be safely cast to the + returned dtype without loss of information. + + Parameters + ---------- + array1, array2, ... : ndarrays + Input arrays. + + Returns + ------- + out : data type code + Data type code. + + See Also + -------- + dtype, mintypecode + + Examples + -------- + >>> np.common_type(np.arange(2, dtype=np.float32)) + + >>> np.common_type(np.arange(2, dtype=np.float32), np.arange(2)) + + >>> np.common_type(np.arange(4), np.array([45, 6.j]), np.array([45.0])) + + + """ + is_complex = False + precision = 0 + for a in arrays: + t = a.dtype.type + if iscomplexobj(a): + is_complex = True + if issubclass(t, _nx.integer): + p = 2 # array_precision[_nx.double] + else: + p = array_precision.get(t, None) + if p is None: + raise TypeError("can't get common type for non-numeric array") + precision = max(precision, p) + if is_complex: + return array_type[1][precision] + else: + return array_type[0][precision] diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_type_check_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_type_check_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..6cc5073b8e20d08d1ec0bf0b044008f00306caf1 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_type_check_impl.pyi @@ -0,0 +1,204 @@ +from collections.abc import Container, Iterable +from typing import ( + Literal as L, + Any, + overload, + TypeVar, + Protocol, +) + +import numpy as np +from numpy import ( + dtype, + generic, + floating, + float64, + complexfloating, + integer, +) + +from numpy._typing import ( + ArrayLike, + DTypeLike, + NBitBase, + NDArray, + _64Bit, + _SupportsDType, + _ScalarLike_co, + _ArrayLike, + _DTypeLikeComplex, +) + +_T = TypeVar("_T") +_T_co = TypeVar("_T_co", covariant=True) +_SCT = TypeVar("_SCT", bound=generic) +_NBit1 = TypeVar("_NBit1", bound=NBitBase) +_NBit2 = TypeVar("_NBit2", bound=NBitBase) + +class _SupportsReal(Protocol[_T_co]): + @property + def real(self) -> _T_co: ... + +class _SupportsImag(Protocol[_T_co]): + @property + def imag(self) -> _T_co: ... + +__all__: list[str] + +def mintypecode( + typechars: Iterable[str | ArrayLike], + typeset: Container[str] = ..., + default: str = ..., +) -> str: ... + +@overload +def real(val: _SupportsReal[_T]) -> _T: ... +@overload +def real(val: ArrayLike) -> NDArray[Any]: ... + +@overload +def imag(val: _SupportsImag[_T]) -> _T: ... +@overload +def imag(val: ArrayLike) -> NDArray[Any]: ... + +@overload +def iscomplex(x: _ScalarLike_co) -> np.bool: ... # type: ignore[misc] +@overload +def iscomplex(x: ArrayLike) -> NDArray[np.bool]: ... + +@overload +def isreal(x: _ScalarLike_co) -> np.bool: ... # type: ignore[misc] +@overload +def isreal(x: ArrayLike) -> NDArray[np.bool]: ... + +def iscomplexobj(x: _SupportsDType[dtype[Any]] | ArrayLike) -> bool: ... + +def isrealobj(x: _SupportsDType[dtype[Any]] | ArrayLike) -> bool: ... + +@overload +def nan_to_num( # type: ignore[misc] + x: _SCT, + copy: bool = ..., + nan: float = ..., + posinf: None | float = ..., + neginf: None | float = ..., +) -> _SCT: ... +@overload +def nan_to_num( + x: _ScalarLike_co, + copy: bool = ..., + nan: float = ..., + posinf: None | float = ..., + neginf: None | float = ..., +) -> Any: ... +@overload +def nan_to_num( + x: _ArrayLike[_SCT], + copy: bool = ..., + nan: float = ..., + posinf: None | float = ..., + neginf: None | float = ..., +) -> NDArray[_SCT]: ... +@overload +def nan_to_num( + x: ArrayLike, + copy: bool = ..., + nan: float = ..., + posinf: None | float = ..., + neginf: None | float = ..., +) -> NDArray[Any]: ... + +# If one passes a complex array to `real_if_close`, then one is reasonably +# expected to verify the output dtype (so we can return an unsafe union here) + +@overload +def real_if_close( # type: ignore[misc] + a: _ArrayLike[complexfloating[_NBit1, _NBit1]], + tol: float = ..., +) -> NDArray[floating[_NBit1]] | NDArray[complexfloating[_NBit1, _NBit1]]: ... +@overload +def real_if_close( + a: _ArrayLike[_SCT], + tol: float = ..., +) -> NDArray[_SCT]: ... +@overload +def real_if_close( + a: ArrayLike, + tol: float = ..., +) -> NDArray[Any]: ... + +@overload +def typename(char: L['S1']) -> L['character']: ... +@overload +def typename(char: L['?']) -> L['bool']: ... +@overload +def typename(char: L['b']) -> L['signed char']: ... +@overload +def typename(char: L['B']) -> L['unsigned char']: ... +@overload +def typename(char: L['h']) -> L['short']: ... +@overload +def typename(char: L['H']) -> L['unsigned short']: ... +@overload +def typename(char: L['i']) -> L['integer']: ... +@overload +def typename(char: L['I']) -> L['unsigned integer']: ... +@overload +def typename(char: L['l']) -> L['long integer']: ... +@overload +def typename(char: L['L']) -> L['unsigned long integer']: ... +@overload +def typename(char: L['q']) -> L['long long integer']: ... +@overload +def typename(char: L['Q']) -> L['unsigned long long integer']: ... +@overload +def typename(char: L['f']) -> L['single precision']: ... +@overload +def typename(char: L['d']) -> L['double precision']: ... +@overload +def typename(char: L['g']) -> L['long precision']: ... +@overload +def typename(char: L['F']) -> L['complex single precision']: ... +@overload +def typename(char: L['D']) -> L['complex double precision']: ... +@overload +def typename(char: L['G']) -> L['complex long double precision']: ... +@overload +def typename(char: L['S']) -> L['string']: ... +@overload +def typename(char: L['U']) -> L['unicode']: ... +@overload +def typename(char: L['V']) -> L['void']: ... +@overload +def typename(char: L['O']) -> L['object']: ... + +@overload +def common_type( # type: ignore[misc] + *arrays: _SupportsDType[dtype[ + integer[Any] + ]] +) -> type[floating[_64Bit]]: ... +@overload +def common_type( # type: ignore[misc] + *arrays: _SupportsDType[dtype[ + floating[_NBit1] + ]] +) -> type[floating[_NBit1]]: ... +@overload +def common_type( # type: ignore[misc] + *arrays: _SupportsDType[dtype[ + integer[Any] | floating[_NBit1] + ]] +) -> type[floating[_NBit1 | _64Bit]]: ... +@overload +def common_type( # type: ignore[misc] + *arrays: _SupportsDType[dtype[ + floating[_NBit1] | complexfloating[_NBit2, _NBit2] + ]] +) -> type[complexfloating[_NBit1 | _NBit2, _NBit1 | _NBit2]]: ... +@overload +def common_type( + *arrays: _SupportsDType[dtype[ + integer[Any] | floating[_NBit1] | complexfloating[_NBit2, _NBit2] + ]] +) -> type[complexfloating[_64Bit | _NBit1 | _NBit2, _64Bit | _NBit1 | _NBit2]]: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_ufunclike_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_ufunclike_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..241d8af4b4cee9a7918dfc5096ec9b4e67b51e83 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_ufunclike_impl.py @@ -0,0 +1,206 @@ +""" +Module of functions that are like ufuncs in acting on arrays and optionally +storing results in an output array. + +""" +__all__ = ['fix', 'isneginf', 'isposinf'] + +import numpy._core.numeric as nx +from numpy._core.overrides import array_function_dispatch +import warnings +import functools + + +def _dispatcher(x, out=None): + return (x, out) + + +@array_function_dispatch(_dispatcher, verify=False, module='numpy') +def fix(x, out=None): + """ + Round to nearest integer towards zero. + + Round an array of floats element-wise to nearest integer towards zero. + The rounded values are returned as floats. + + Parameters + ---------- + x : array_like + An array of floats to be rounded + out : ndarray, optional + A location into which the result is stored. If provided, it must have + a shape that the input broadcasts to. If not provided or None, a + freshly-allocated array is returned. + + Returns + ------- + out : ndarray of floats + A float array with the same dimensions as the input. + If second argument is not supplied then a float array is returned + with the rounded values. + + If a second argument is supplied the result is stored there. + The return value `out` is then a reference to that array. + + See Also + -------- + rint, trunc, floor, ceil + around : Round to given number of decimals + + Examples + -------- + >>> np.fix(3.14) + 3.0 + >>> np.fix(3) + 3.0 + >>> np.fix([2.1, 2.9, -2.1, -2.9]) + array([ 2., 2., -2., -2.]) + + """ + # promote back to an array if flattened + res = nx.asanyarray(nx.ceil(x, out=out)) + res = nx.floor(x, out=res, where=nx.greater_equal(x, 0)) + + # when no out argument is passed and no subclasses are involved, flatten + # scalars + if out is None and type(res) is nx.ndarray: + res = res[()] + return res + + +@array_function_dispatch(_dispatcher, verify=False, module='numpy') +def isposinf(x, out=None): + """ + Test element-wise for positive infinity, return result as bool array. + + Parameters + ---------- + x : array_like + The input array. + out : array_like, optional + A location into which the result is stored. If provided, it must have a + shape that the input broadcasts to. If not provided or None, a + freshly-allocated boolean array is returned. + + Returns + ------- + out : ndarray + A boolean array with the same dimensions as the input. + If second argument is not supplied then a boolean array is returned + with values True where the corresponding element of the input is + positive infinity and values False where the element of the input is + not positive infinity. + + If a second argument is supplied the result is stored there. If the + type of that array is a numeric type the result is represented as zeros + and ones, if the type is boolean then as False and True. + The return value `out` is then a reference to that array. + + See Also + -------- + isinf, isneginf, isfinite, isnan + + Notes + ----- + NumPy uses the IEEE Standard for Binary Floating-Point for Arithmetic + (IEEE 754). + + Errors result if the second argument is also supplied when x is a scalar + input, if first and second arguments have different shapes, or if the + first argument has complex values + + Examples + -------- + >>> np.isposinf(np.inf) + True + >>> np.isposinf(-np.inf) + False + >>> np.isposinf([-np.inf, 0., np.inf]) + array([False, False, True]) + + >>> x = np.array([-np.inf, 0., np.inf]) + >>> y = np.array([2, 2, 2]) + >>> np.isposinf(x, y) + array([0, 0, 1]) + >>> y + array([0, 0, 1]) + + """ + is_inf = nx.isinf(x) + try: + signbit = ~nx.signbit(x) + except TypeError as e: + dtype = nx.asanyarray(x).dtype + raise TypeError(f'This operation is not supported for {dtype} values ' + 'because it would be ambiguous.') from e + else: + return nx.logical_and(is_inf, signbit, out) + + +@array_function_dispatch(_dispatcher, verify=False, module='numpy') +def isneginf(x, out=None): + """ + Test element-wise for negative infinity, return result as bool array. + + Parameters + ---------- + x : array_like + The input array. + out : array_like, optional + A location into which the result is stored. If provided, it must have a + shape that the input broadcasts to. If not provided or None, a + freshly-allocated boolean array is returned. + + Returns + ------- + out : ndarray + A boolean array with the same dimensions as the input. + If second argument is not supplied then a numpy boolean array is + returned with values True where the corresponding element of the + input is negative infinity and values False where the element of + the input is not negative infinity. + + If a second argument is supplied the result is stored there. If the + type of that array is a numeric type the result is represented as + zeros and ones, if the type is boolean then as False and True. The + return value `out` is then a reference to that array. + + See Also + -------- + isinf, isposinf, isnan, isfinite + + Notes + ----- + NumPy uses the IEEE Standard for Binary Floating-Point for Arithmetic + (IEEE 754). + + Errors result if the second argument is also supplied when x is a scalar + input, if first and second arguments have different shapes, or if the + first argument has complex values. + + Examples + -------- + >>> np.isneginf(-np.inf) + True + >>> np.isneginf(np.inf) + False + >>> np.isneginf([-np.inf, 0., np.inf]) + array([ True, False, False]) + + >>> x = np.array([-np.inf, 0., np.inf]) + >>> y = np.array([2, 2, 2]) + >>> np.isneginf(x, y) + array([1, 0, 0]) + >>> y + array([1, 0, 0]) + + """ + is_inf = nx.isinf(x) + try: + signbit = nx.signbit(x) + except TypeError as e: + dtype = nx.asanyarray(x).dtype + raise TypeError(f'This operation is not supported for {dtype} values ' + 'because it would be ambiguous.') from e + else: + return nx.logical_and(is_inf, signbit, out) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_ufunclike_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_ufunclike_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..dd927bc62158013a4756571627300b90221f1e77 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_ufunclike_impl.pyi @@ -0,0 +1,67 @@ +from typing import Any, overload, TypeVar + +import numpy as np +from numpy import floating, object_ +from numpy._typing import ( + NDArray, + _FloatLike_co, + _ArrayLikeFloat_co, + _ArrayLikeObject_co, +) + +_ArrayType = TypeVar("_ArrayType", bound=NDArray[Any]) + +__all__: list[str] + +@overload +def fix( # type: ignore[misc] + x: _FloatLike_co, + out: None = ..., +) -> floating[Any]: ... +@overload +def fix( + x: _ArrayLikeFloat_co, + out: None = ..., +) -> NDArray[floating[Any]]: ... +@overload +def fix( + x: _ArrayLikeObject_co, + out: None = ..., +) -> NDArray[object_]: ... +@overload +def fix( + x: _ArrayLikeFloat_co | _ArrayLikeObject_co, + out: _ArrayType, +) -> _ArrayType: ... + +@overload +def isposinf( # type: ignore[misc] + x: _FloatLike_co, + out: None = ..., +) -> np.bool: ... +@overload +def isposinf( + x: _ArrayLikeFloat_co, + out: None = ..., +) -> NDArray[np.bool]: ... +@overload +def isposinf( + x: _ArrayLikeFloat_co, + out: _ArrayType, +) -> _ArrayType: ... + +@overload +def isneginf( # type: ignore[misc] + x: _FloatLike_co, + out: None = ..., +) -> np.bool: ... +@overload +def isneginf( + x: _ArrayLikeFloat_co, + out: None = ..., +) -> NDArray[np.bool]: ... +@overload +def isneginf( + x: _ArrayLikeFloat_co, + out: _ArrayType, +) -> _ArrayType: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_user_array_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_user_array_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..c26fa4435e92787e30bb261c86de8e401f1a4335 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_user_array_impl.py @@ -0,0 +1,289 @@ +""" +Container class for backward compatibility with NumArray. + +The user_array.container class exists for backward compatibility with NumArray +and is not meant to be used in new code. If you need to create an array +container class, we recommend either creating a class that wraps an ndarray +or subclasses ndarray. + +""" +from numpy._core import ( + array, asarray, absolute, add, subtract, multiply, divide, + remainder, power, left_shift, right_shift, bitwise_and, bitwise_or, + bitwise_xor, invert, less, less_equal, not_equal, equal, greater, + greater_equal, shape, reshape, arange, sin, sqrt, transpose +) + + +class container: + """ + container(data, dtype=None, copy=True) + + Standard container-class for easy multiple-inheritance. + + Methods + ------- + copy + tostring + byteswap + astype + + """ + def __init__(self, data, dtype=None, copy=True): + self.array = array(data, dtype, copy=copy) + + def __repr__(self): + if self.ndim > 0: + return self.__class__.__name__ + repr(self.array)[len("array"):] + else: + return self.__class__.__name__ + "(" + repr(self.array) + ")" + + def __array__(self, t=None): + if t: + return self.array.astype(t) + return self.array + + # Array as sequence + def __len__(self): + return len(self.array) + + def __getitem__(self, index): + return self._rc(self.array[index]) + + def __setitem__(self, index, value): + self.array[index] = asarray(value, self.dtype) + + def __abs__(self): + return self._rc(absolute(self.array)) + + def __neg__(self): + return self._rc(-self.array) + + def __add__(self, other): + return self._rc(self.array + asarray(other)) + + __radd__ = __add__ + + def __iadd__(self, other): + add(self.array, other, self.array) + return self + + def __sub__(self, other): + return self._rc(self.array - asarray(other)) + + def __rsub__(self, other): + return self._rc(asarray(other) - self.array) + + def __isub__(self, other): + subtract(self.array, other, self.array) + return self + + def __mul__(self, other): + return self._rc(multiply(self.array, asarray(other))) + + __rmul__ = __mul__ + + def __imul__(self, other): + multiply(self.array, other, self.array) + return self + + def __div__(self, other): + return self._rc(divide(self.array, asarray(other))) + + def __rdiv__(self, other): + return self._rc(divide(asarray(other), self.array)) + + def __idiv__(self, other): + divide(self.array, other, self.array) + return self + + def __mod__(self, other): + return self._rc(remainder(self.array, other)) + + def __rmod__(self, other): + return self._rc(remainder(other, self.array)) + + def __imod__(self, other): + remainder(self.array, other, self.array) + return self + + def __divmod__(self, other): + return (self._rc(divide(self.array, other)), + self._rc(remainder(self.array, other))) + + def __rdivmod__(self, other): + return (self._rc(divide(other, self.array)), + self._rc(remainder(other, self.array))) + + def __pow__(self, other): + return self._rc(power(self.array, asarray(other))) + + def __rpow__(self, other): + return self._rc(power(asarray(other), self.array)) + + def __ipow__(self, other): + power(self.array, other, self.array) + return self + + def __lshift__(self, other): + return self._rc(left_shift(self.array, other)) + + def __rshift__(self, other): + return self._rc(right_shift(self.array, other)) + + def __rlshift__(self, other): + return self._rc(left_shift(other, self.array)) + + def __rrshift__(self, other): + return self._rc(right_shift(other, self.array)) + + def __ilshift__(self, other): + left_shift(self.array, other, self.array) + return self + + def __irshift__(self, other): + right_shift(self.array, other, self.array) + return self + + def __and__(self, other): + return self._rc(bitwise_and(self.array, other)) + + def __rand__(self, other): + return self._rc(bitwise_and(other, self.array)) + + def __iand__(self, other): + bitwise_and(self.array, other, self.array) + return self + + def __xor__(self, other): + return self._rc(bitwise_xor(self.array, other)) + + def __rxor__(self, other): + return self._rc(bitwise_xor(other, self.array)) + + def __ixor__(self, other): + bitwise_xor(self.array, other, self.array) + return self + + def __or__(self, other): + return self._rc(bitwise_or(self.array, other)) + + def __ror__(self, other): + return self._rc(bitwise_or(other, self.array)) + + def __ior__(self, other): + bitwise_or(self.array, other, self.array) + return self + + def __pos__(self): + return self._rc(self.array) + + def __invert__(self): + return self._rc(invert(self.array)) + + def _scalarfunc(self, func): + if self.ndim == 0: + return func(self[0]) + else: + raise TypeError( + "only rank-0 arrays can be converted to Python scalars.") + + def __complex__(self): + return self._scalarfunc(complex) + + def __float__(self): + return self._scalarfunc(float) + + def __int__(self): + return self._scalarfunc(int) + + def __hex__(self): + return self._scalarfunc(hex) + + def __oct__(self): + return self._scalarfunc(oct) + + def __lt__(self, other): + return self._rc(less(self.array, other)) + + def __le__(self, other): + return self._rc(less_equal(self.array, other)) + + def __eq__(self, other): + return self._rc(equal(self.array, other)) + + def __ne__(self, other): + return self._rc(not_equal(self.array, other)) + + def __gt__(self, other): + return self._rc(greater(self.array, other)) + + def __ge__(self, other): + return self._rc(greater_equal(self.array, other)) + + def copy(self): + "" + return self._rc(self.array.copy()) + + def tostring(self): + "" + return self.array.tostring() + + def tobytes(self): + "" + return self.array.tobytes() + + def byteswap(self): + "" + return self._rc(self.array.byteswap()) + + def astype(self, typecode): + "" + return self._rc(self.array.astype(typecode)) + + def _rc(self, a): + if len(shape(a)) == 0: + return a + else: + return self.__class__(a) + + def __array_wrap__(self, *args): + return self.__class__(args[0]) + + def __setattr__(self, attr, value): + if attr == 'array': + object.__setattr__(self, attr, value) + return + try: + self.array.__setattr__(attr, value) + except AttributeError: + object.__setattr__(self, attr, value) + + # Only called after other approaches fail. + def __getattr__(self, attr): + if (attr == 'array'): + return object.__getattribute__(self, attr) + return self.array.__getattribute__(attr) + + +############################################################# +# Test of class container +############################################################# +if __name__ == '__main__': + temp = reshape(arange(10000), (100, 100)) + + ua = container(temp) + # new object created begin test + print(dir(ua)) + print(shape(ua), ua.shape) # I have changed Numeric.py + + ua_small = ua[:3, :5] + print(ua_small) + # this did not change ua[0,0], which is not normal behavior + ua_small[0, 0] = 10 + print(ua_small[0, 0], ua[0, 0]) + print(sin(ua_small) / 3. * 6. + sqrt(ua_small ** 2)) + print(less(ua_small, 103), type(less(ua_small, 103))) + print(type(ua_small * reshape(arange(15), shape(ua_small)))) + print(reshape(ua_small, (5, 3))) + print(transpose(ua_small)) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_utils_impl.py b/venv/lib/python3.12/site-packages/numpy/lib/_utils_impl.py new file mode 100644 index 0000000000000000000000000000000000000000..8a2c4b5c61e7d82ba193f4598316e2337a543843 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_utils_impl.py @@ -0,0 +1,771 @@ +import os +import sys +import textwrap +import types +import re +import warnings +import functools +import platform + +from numpy._core import ndarray +from numpy._utils import set_module +import numpy as np + +__all__ = [ + 'get_include', 'info', 'show_runtime' +] + + +@set_module('numpy') +def show_runtime(): + """ + Print information about various resources in the system + including available intrinsic support and BLAS/LAPACK library + in use + + .. versionadded:: 1.24.0 + + See Also + -------- + show_config : Show libraries in the system on which NumPy was built. + + Notes + ----- + 1. Information is derived with the help of `threadpoolctl `_ + library if available. + 2. SIMD related information is derived from ``__cpu_features__``, + ``__cpu_baseline__`` and ``__cpu_dispatch__`` + + """ + from numpy._core._multiarray_umath import ( + __cpu_features__, __cpu_baseline__, __cpu_dispatch__ + ) + from pprint import pprint + config_found = [{ + "numpy_version": np.__version__, + "python": sys.version, + "uname": platform.uname(), + }] + features_found, features_not_found = [], [] + for feature in __cpu_dispatch__: + if __cpu_features__[feature]: + features_found.append(feature) + else: + features_not_found.append(feature) + config_found.append({ + "simd_extensions": { + "baseline": __cpu_baseline__, + "found": features_found, + "not_found": features_not_found + } + }) + try: + from threadpoolctl import threadpool_info + config_found.extend(threadpool_info()) + except ImportError: + print("WARNING: `threadpoolctl` not found in system!" + " Install it by `pip install threadpoolctl`." + " Once installed, try `np.show_runtime` again" + " for more detailed build information") + pprint(config_found) + + +@set_module('numpy') +def get_include(): + """ + Return the directory that contains the NumPy \\*.h header files. + + Extension modules that need to compile against NumPy may need to use this + function to locate the appropriate include directory. + + Notes + ----- + When using ``setuptools``, for example in ``setup.py``:: + + import numpy as np + ... + Extension('extension_name', ... + include_dirs=[np.get_include()]) + ... + + Note that a CLI tool ``numpy-config`` was introduced in NumPy 2.0, using + that is likely preferred for build systems other than ``setuptools``:: + + $ numpy-config --cflags + -I/path/to/site-packages/numpy/_core/include + + # Or rely on pkg-config: + $ export PKG_CONFIG_PATH=$(numpy-config --pkgconfigdir) + $ pkg-config --cflags + -I/path/to/site-packages/numpy/_core/include + + """ + import numpy + if numpy.show_config is None: + # running from numpy source directory + d = os.path.join(os.path.dirname(numpy.__file__), '_core', 'include') + else: + # using installed numpy core headers + import numpy._core as _core + d = os.path.join(os.path.dirname(_core.__file__), 'include') + return d + + +class _Deprecate: + """ + Decorator class to deprecate old functions. + + Refer to `deprecate` for details. + + See Also + -------- + deprecate + + """ + + def __init__(self, old_name=None, new_name=None, message=None): + self.old_name = old_name + self.new_name = new_name + self.message = message + + def __call__(self, func, *args, **kwargs): + """ + Decorator call. Refer to ``decorate``. + + """ + old_name = self.old_name + new_name = self.new_name + message = self.message + + if old_name is None: + old_name = func.__name__ + if new_name is None: + depdoc = "`%s` is deprecated!" % old_name + else: + depdoc = "`%s` is deprecated, use `%s` instead!" % \ + (old_name, new_name) + + if message is not None: + depdoc += "\n" + message + + @functools.wraps(func) + def newfunc(*args, **kwds): + warnings.warn(depdoc, DeprecationWarning, stacklevel=2) + return func(*args, **kwds) + + newfunc.__name__ = old_name + doc = func.__doc__ + if doc is None: + doc = depdoc + else: + lines = doc.expandtabs().split('\n') + indent = _get_indent(lines[1:]) + if lines[0].lstrip(): + # Indent the original first line to let inspect.cleandoc() + # dedent the docstring despite the deprecation notice. + doc = indent * ' ' + doc + else: + # Remove the same leading blank lines as cleandoc() would. + skip = len(lines[0]) + 1 + for line in lines[1:]: + if len(line) > indent: + break + skip += len(line) + 1 + doc = doc[skip:] + depdoc = textwrap.indent(depdoc, ' ' * indent) + doc = '\n\n'.join([depdoc, doc]) + newfunc.__doc__ = doc + + return newfunc + + +def _get_indent(lines): + """ + Determines the leading whitespace that could be removed from all the lines. + """ + indent = sys.maxsize + for line in lines: + content = len(line.lstrip()) + if content: + indent = min(indent, len(line) - content) + if indent == sys.maxsize: + indent = 0 + return indent + + +def deprecate(*args, **kwargs): + """ + Issues a DeprecationWarning, adds warning to `old_name`'s + docstring, rebinds ``old_name.__name__`` and returns the new + function object. + + This function may also be used as a decorator. + + .. deprecated:: 2.0 + Use `~warnings.warn` with :exc:`DeprecationWarning` instead. + + Parameters + ---------- + func : function + The function to be deprecated. + old_name : str, optional + The name of the function to be deprecated. Default is None, in + which case the name of `func` is used. + new_name : str, optional + The new name for the function. Default is None, in which case the + deprecation message is that `old_name` is deprecated. If given, the + deprecation message is that `old_name` is deprecated and `new_name` + should be used instead. + message : str, optional + Additional explanation of the deprecation. Displayed in the + docstring after the warning. + + Returns + ------- + old_func : function + The deprecated function. + + Examples + -------- + Note that ``olduint`` returns a value after printing Deprecation + Warning: + + >>> olduint = np.lib.utils.deprecate(np.uint) + DeprecationWarning: `uint64` is deprecated! # may vary + >>> olduint(6) + 6 + + """ + # Deprecate may be run as a function or as a decorator + # If run as a function, we initialise the decorator class + # and execute its __call__ method. + + # Deprecated in NumPy 2.0, 2023-07-11 + warnings.warn( + "`deprecate` is deprecated, " + "use `warn` with `DeprecationWarning` instead. " + "(deprecated in NumPy 2.0)", + DeprecationWarning, + stacklevel=2 + ) + + if args: + fn = args[0] + args = args[1:] + + return _Deprecate(*args, **kwargs)(fn) + else: + return _Deprecate(*args, **kwargs) + + +def deprecate_with_doc(msg): + """ + Deprecates a function and includes the deprecation in its docstring. + + .. deprecated:: 2.0 + Use `~warnings.warn` with :exc:`DeprecationWarning` instead. + + This function is used as a decorator. It returns an object that can be + used to issue a DeprecationWarning, by passing the to-be decorated + function as argument, this adds warning to the to-be decorated function's + docstring and returns the new function object. + + See Also + -------- + deprecate : Decorate a function such that it issues a + :exc:`DeprecationWarning` + + Parameters + ---------- + msg : str + Additional explanation of the deprecation. Displayed in the + docstring after the warning. + + Returns + ------- + obj : object + + """ + + # Deprecated in NumPy 2.0, 2023-07-11 + warnings.warn( + "`deprecate` is deprecated, " + "use `warn` with `DeprecationWarning` instead. " + "(deprecated in NumPy 2.0)", + DeprecationWarning, + stacklevel=2 + ) + + return _Deprecate(message=msg) + + +#----------------------------------------------------------------------------- + + +# NOTE: pydoc defines a help function which works similarly to this +# except it uses a pager to take over the screen. + +# combine name and arguments and split to multiple lines of width +# characters. End lines on a comma and begin argument list indented with +# the rest of the arguments. +def _split_line(name, arguments, width): + firstwidth = len(name) + k = firstwidth + newstr = name + sepstr = ", " + arglist = arguments.split(sepstr) + for argument in arglist: + if k == firstwidth: + addstr = "" + else: + addstr = sepstr + k = k + len(argument) + len(addstr) + if k > width: + k = firstwidth + 1 + len(argument) + newstr = newstr + ",\n" + " "*(firstwidth+2) + argument + else: + newstr = newstr + addstr + argument + return newstr + +_namedict = None +_dictlist = None + +# Traverse all module directories underneath globals +# to see if something is defined +def _makenamedict(module='numpy'): + module = __import__(module, globals(), locals(), []) + thedict = {module.__name__:module.__dict__} + dictlist = [module.__name__] + totraverse = [module.__dict__] + while True: + if len(totraverse) == 0: + break + thisdict = totraverse.pop(0) + for x in thisdict.keys(): + if isinstance(thisdict[x], types.ModuleType): + modname = thisdict[x].__name__ + if modname not in dictlist: + moddict = thisdict[x].__dict__ + dictlist.append(modname) + totraverse.append(moddict) + thedict[modname] = moddict + return thedict, dictlist + + +def _info(obj, output=None): + """Provide information about ndarray obj. + + Parameters + ---------- + obj : ndarray + Must be ndarray, not checked. + output + Where printed output goes. + + Notes + ----- + Copied over from the numarray module prior to its removal. + Adapted somewhat as only numpy is an option now. + + Called by info. + + """ + extra = "" + tic = "" + bp = lambda x: x + cls = getattr(obj, '__class__', type(obj)) + nm = getattr(cls, '__name__', cls) + strides = obj.strides + endian = obj.dtype.byteorder + + if output is None: + output = sys.stdout + + print("class: ", nm, file=output) + print("shape: ", obj.shape, file=output) + print("strides: ", strides, file=output) + print("itemsize: ", obj.itemsize, file=output) + print("aligned: ", bp(obj.flags.aligned), file=output) + print("contiguous: ", bp(obj.flags.contiguous), file=output) + print("fortran: ", obj.flags.fortran, file=output) + print( + "data pointer: %s%s" % (hex(obj.ctypes._as_parameter_.value), extra), + file=output + ) + print("byteorder: ", end=' ', file=output) + if endian in ['|', '=']: + print("%s%s%s" % (tic, sys.byteorder, tic), file=output) + byteswap = False + elif endian == '>': + print("%sbig%s" % (tic, tic), file=output) + byteswap = sys.byteorder != "big" + else: + print("%slittle%s" % (tic, tic), file=output) + byteswap = sys.byteorder != "little" + print("byteswap: ", bp(byteswap), file=output) + print("type: %s" % obj.dtype, file=output) + + +@set_module('numpy') +def info(object=None, maxwidth=76, output=None, toplevel='numpy'): + """ + Get help information for an array, function, class, or module. + + Parameters + ---------- + object : object or str, optional + Input object or name to get information about. If `object` is + an `ndarray` instance, information about the array is printed. + If `object` is a numpy object, its docstring is given. If it is + a string, available modules are searched for matching objects. + If None, information about `info` itself is returned. + maxwidth : int, optional + Printing width. + output : file like object, optional + File like object that the output is written to, default is + ``None``, in which case ``sys.stdout`` will be used. + The object has to be opened in 'w' or 'a' mode. + toplevel : str, optional + Start search at this level. + + Notes + ----- + When used interactively with an object, ``np.info(obj)`` is equivalent + to ``help(obj)`` on the Python prompt or ``obj?`` on the IPython + prompt. + + Examples + -------- + >>> np.info(np.polyval) # doctest: +SKIP + polyval(p, x) + Evaluate the polynomial p at x. + ... + + When using a string for `object` it is possible to get multiple results. + + >>> np.info('fft') # doctest: +SKIP + *** Found in numpy *** + Core FFT routines + ... + *** Found in numpy.fft *** + fft(a, n=None, axis=-1) + ... + *** Repeat reference found in numpy.fft.fftpack *** + *** Total of 3 references found. *** + + When the argument is an array, information about the array is printed. + + >>> a = np.array([[1 + 2j, 3, -4], [-5j, 6, 0]], dtype=np.complex64) + >>> np.info(a) + class: ndarray + shape: (2, 3) + strides: (24, 8) + itemsize: 8 + aligned: True + contiguous: True + fortran: False + data pointer: 0x562b6e0d2860 # may vary + byteorder: little + byteswap: False + type: complex64 + + """ + global _namedict, _dictlist + # Local import to speed up numpy's import time. + import pydoc + import inspect + + if (hasattr(object, '_ppimport_importer') or + hasattr(object, '_ppimport_module')): + object = object._ppimport_module + elif hasattr(object, '_ppimport_attr'): + object = object._ppimport_attr + + if output is None: + output = sys.stdout + + if object is None: + info(info) + elif isinstance(object, ndarray): + _info(object, output=output) + elif isinstance(object, str): + if _namedict is None: + _namedict, _dictlist = _makenamedict(toplevel) + numfound = 0 + objlist = [] + for namestr in _dictlist: + try: + obj = _namedict[namestr][object] + if id(obj) in objlist: + print("\n " + "*** Repeat reference found in %s *** " % namestr, + file=output + ) + else: + objlist.append(id(obj)) + print(" *** Found in %s ***" % namestr, file=output) + info(obj) + print("-"*maxwidth, file=output) + numfound += 1 + except KeyError: + pass + if numfound == 0: + print("Help for %s not found." % object, file=output) + else: + print("\n " + "*** Total of %d references found. ***" % numfound, + file=output + ) + + elif inspect.isfunction(object) or inspect.ismethod(object): + name = object.__name__ + try: + arguments = str(inspect.signature(object)) + except Exception: + arguments = "()" + + if len(name+arguments) > maxwidth: + argstr = _split_line(name, arguments, maxwidth) + else: + argstr = name + arguments + + print(" " + argstr + "\n", file=output) + print(inspect.getdoc(object), file=output) + + elif inspect.isclass(object): + name = object.__name__ + try: + arguments = str(inspect.signature(object)) + except Exception: + arguments = "()" + + if len(name+arguments) > maxwidth: + argstr = _split_line(name, arguments, maxwidth) + else: + argstr = name + arguments + + print(" " + argstr + "\n", file=output) + doc1 = inspect.getdoc(object) + if doc1 is None: + if hasattr(object, '__init__'): + print(inspect.getdoc(object.__init__), file=output) + else: + print(inspect.getdoc(object), file=output) + + methods = pydoc.allmethods(object) + + public_methods = [meth for meth in methods if meth[0] != '_'] + if public_methods: + print("\n\nMethods:\n", file=output) + for meth in public_methods: + thisobj = getattr(object, meth, None) + if thisobj is not None: + methstr, other = pydoc.splitdoc( + inspect.getdoc(thisobj) or "None" + ) + print(" %s -- %s" % (meth, methstr), file=output) + + elif hasattr(object, '__doc__'): + print(inspect.getdoc(object), file=output) + + +def safe_eval(source): + """ + Protected string evaluation. + + .. deprecated:: 2.0 + Use `ast.literal_eval` instead. + + Evaluate a string containing a Python literal expression without + allowing the execution of arbitrary non-literal code. + + .. warning:: + + This function is identical to :py:meth:`ast.literal_eval` and + has the same security implications. It may not always be safe + to evaluate large input strings. + + Parameters + ---------- + source : str + The string to evaluate. + + Returns + ------- + obj : object + The result of evaluating `source`. + + Raises + ------ + SyntaxError + If the code has invalid Python syntax, or if it contains + non-literal code. + + Examples + -------- + >>> np.safe_eval('1') + 1 + >>> np.safe_eval('[1, 2, 3]') + [1, 2, 3] + >>> np.safe_eval('{"foo": ("bar", 10.0)}') + {'foo': ('bar', 10.0)} + + >>> np.safe_eval('import os') + Traceback (most recent call last): + ... + SyntaxError: invalid syntax + + >>> np.safe_eval('open("/home/user/.ssh/id_dsa").read()') + Traceback (most recent call last): + ... + ValueError: malformed node or string: <_ast.Call object at 0x...> + + """ + + # Deprecated in NumPy 2.0, 2023-07-11 + warnings.warn( + "`safe_eval` is deprecated. Use `ast.literal_eval` instead. " + "Be aware of security implications, such as memory exhaustion " + "based attacks (deprecated in NumPy 2.0)", + DeprecationWarning, + stacklevel=2 + ) + + # Local import to speed up numpy's import time. + import ast + return ast.literal_eval(source) + + +def _median_nancheck(data, result, axis): + """ + Utility function to check median result from data for NaN values at the end + and return NaN in that case. Input result can also be a MaskedArray. + + Parameters + ---------- + data : array + Sorted input data to median function + result : Array or MaskedArray + Result of median function. + axis : int + Axis along which the median was computed. + + Returns + ------- + result : scalar or ndarray + Median or NaN in axes which contained NaN in the input. If the input + was an array, NaN will be inserted in-place. If a scalar, either the + input itself or a scalar NaN. + """ + if data.size == 0: + return result + potential_nans = data.take(-1, axis=axis) + n = np.isnan(potential_nans) + # masked NaN values are ok, although for masked the copyto may fail for + # unmasked ones (this was always broken) when the result is a scalar. + if np.ma.isMaskedArray(n): + n = n.filled(False) + + if not n.any(): + return result + + # Without given output, it is possible that the current result is a + # numpy scalar, which is not writeable. If so, just return nan. + if isinstance(result, np.generic): + return potential_nans + + # Otherwise copy NaNs (if there are any) + np.copyto(result, potential_nans, where=n) + return result + +def _opt_info(): + """ + Returns a string containing the CPU features supported + by the current build. + + The format of the string can be explained as follows: + - Dispatched features supported by the running machine end with `*`. + - Dispatched features not supported by the running machine + end with `?`. + - Remaining features represent the baseline. + + Returns: + str: A formatted string indicating the supported CPU features. + """ + from numpy._core._multiarray_umath import ( + __cpu_features__, __cpu_baseline__, __cpu_dispatch__ + ) + + if len(__cpu_baseline__) == 0 and len(__cpu_dispatch__) == 0: + return '' + + enabled_features = ' '.join(__cpu_baseline__) + for feature in __cpu_dispatch__: + if __cpu_features__[feature]: + enabled_features += f" {feature}*" + else: + enabled_features += f" {feature}?" + + return enabled_features + +def drop_metadata(dtype, /): + """ + Returns the dtype unchanged if it contained no metadata or a copy of the + dtype if it (or any of its structure dtypes) contained metadata. + + This utility is used by `np.save` and `np.savez` to drop metadata before + saving. + + .. note:: + + Due to its limitation this function may move to a more appropriate + home or change in the future and is considered semi-public API only. + + .. warning:: + + This function does not preserve more strange things like record dtypes + and user dtypes may simply return the wrong thing. If you need to be + sure about the latter, check the result with: + ``np.can_cast(new_dtype, dtype, casting="no")``. + + """ + if dtype.fields is not None: + found_metadata = dtype.metadata is not None + + names = [] + formats = [] + offsets = [] + titles = [] + for name, field in dtype.fields.items(): + field_dt = drop_metadata(field[0]) + if field_dt is not field[0]: + found_metadata = True + + names.append(name) + formats.append(field_dt) + offsets.append(field[1]) + titles.append(None if len(field) < 3 else field[2]) + + if not found_metadata: + return dtype + + structure = dict( + names=names, formats=formats, offsets=offsets, titles=titles, + itemsize=dtype.itemsize) + + # NOTE: Could pass (dtype.type, structure) to preserve record dtypes... + return np.dtype(structure, align=dtype.isalignedstruct) + elif dtype.subdtype is not None: + # subarray dtype + subdtype, shape = dtype.subdtype + new_subdtype = drop_metadata(subdtype) + if dtype.metadata is None and new_subdtype is subdtype: + return dtype + + return np.dtype((new_subdtype, shape)) + else: + # Normal unstructured dtype + if dtype.metadata is None: + return dtype + # Note that `dt.str` doesn't round-trip e.g. for user-dtypes. + return np.dtype(dtype.str) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_utils_impl.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_utils_impl.pyi new file mode 100644 index 0000000000000000000000000000000000000000..b1453874e85e1982b22e8660047feb45a7b0f44b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_utils_impl.pyi @@ -0,0 +1,33 @@ +from typing import ( + Any, + TypeVar, + Protocol, +) + +from numpy._core.numerictypes import ( + issubdtype as issubdtype, +) + +_T_contra = TypeVar("_T_contra", contravariant=True) + +# A file-like object opened in `w` mode +class _SupportsWrite(Protocol[_T_contra]): + def write(self, s: _T_contra, /) -> Any: ... + +__all__: list[str] + +def get_include() -> str: ... + +def info( + object: object = ..., + maxwidth: int = ..., + output: None | _SupportsWrite[str] = ..., + toplevel: str = ..., +) -> None: ... + +def source( + object: object, + output: None | _SupportsWrite[str] = ..., +) -> None: ... + +def show_runtime() -> None: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_version.py b/venv/lib/python3.12/site-packages/numpy/lib/_version.py new file mode 100644 index 0000000000000000000000000000000000000000..bfac5f814501767bd311084af41edddaf1db7b71 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_version.py @@ -0,0 +1,155 @@ +"""Utility to compare (NumPy) version strings. + +The NumpyVersion class allows properly comparing numpy version strings. +The LooseVersion and StrictVersion classes that distutils provides don't +work; they don't recognize anything like alpha/beta/rc/dev versions. + +""" +import re + + +__all__ = ['NumpyVersion'] + + +class NumpyVersion(): + """Parse and compare numpy version strings. + + NumPy has the following versioning scheme (numbers given are examples; they + can be > 9 in principle): + + - Released version: '1.8.0', '1.8.1', etc. + - Alpha: '1.8.0a1', '1.8.0a2', etc. + - Beta: '1.8.0b1', '1.8.0b2', etc. + - Release candidates: '1.8.0rc1', '1.8.0rc2', etc. + - Development versions: '1.8.0.dev-f1234afa' (git commit hash appended) + - Development versions after a1: '1.8.0a1.dev-f1234afa', + '1.8.0b2.dev-f1234afa', + '1.8.1rc1.dev-f1234afa', etc. + - Development versions (no git hash available): '1.8.0.dev-Unknown' + + Comparing needs to be done against a valid version string or other + `NumpyVersion` instance. Note that all development versions of the same + (pre-)release compare equal. + + .. versionadded:: 1.9.0 + + Parameters + ---------- + vstring : str + NumPy version string (``np.__version__``). + + Examples + -------- + >>> from numpy.lib import NumpyVersion + >>> if NumpyVersion(np.__version__) < '1.7.0': + ... print('skip') + >>> # skip + + >>> NumpyVersion('1.7') # raises ValueError, add ".0" + Traceback (most recent call last): + ... + ValueError: Not a valid numpy version string + + """ + + def __init__(self, vstring): + self.vstring = vstring + ver_main = re.match(r'\d+\.\d+\.\d+', vstring) + if not ver_main: + raise ValueError("Not a valid numpy version string") + + self.version = ver_main.group() + self.major, self.minor, self.bugfix = [int(x) for x in + self.version.split('.')] + if len(vstring) == ver_main.end(): + self.pre_release = 'final' + else: + alpha = re.match(r'a\d', vstring[ver_main.end():]) + beta = re.match(r'b\d', vstring[ver_main.end():]) + rc = re.match(r'rc\d', vstring[ver_main.end():]) + pre_rel = [m for m in [alpha, beta, rc] if m is not None] + if pre_rel: + self.pre_release = pre_rel[0].group() + else: + self.pre_release = '' + + self.is_devversion = bool(re.search(r'.dev', vstring)) + + def _compare_version(self, other): + """Compare major.minor.bugfix""" + if self.major == other.major: + if self.minor == other.minor: + if self.bugfix == other.bugfix: + vercmp = 0 + elif self.bugfix > other.bugfix: + vercmp = 1 + else: + vercmp = -1 + elif self.minor > other.minor: + vercmp = 1 + else: + vercmp = -1 + elif self.major > other.major: + vercmp = 1 + else: + vercmp = -1 + + return vercmp + + def _compare_pre_release(self, other): + """Compare alpha/beta/rc/final.""" + if self.pre_release == other.pre_release: + vercmp = 0 + elif self.pre_release == 'final': + vercmp = 1 + elif other.pre_release == 'final': + vercmp = -1 + elif self.pre_release > other.pre_release: + vercmp = 1 + else: + vercmp = -1 + + return vercmp + + def _compare(self, other): + if not isinstance(other, (str, NumpyVersion)): + raise ValueError("Invalid object to compare with NumpyVersion.") + + if isinstance(other, str): + other = NumpyVersion(other) + + vercmp = self._compare_version(other) + if vercmp == 0: + # Same x.y.z version, check for alpha/beta/rc + vercmp = self._compare_pre_release(other) + if vercmp == 0: + # Same version and same pre-release, check if dev version + if self.is_devversion is other.is_devversion: + vercmp = 0 + elif self.is_devversion: + vercmp = -1 + else: + vercmp = 1 + + return vercmp + + def __lt__(self, other): + return self._compare(other) < 0 + + def __le__(self, other): + return self._compare(other) <= 0 + + def __eq__(self, other): + return self._compare(other) == 0 + + def __ne__(self, other): + return self._compare(other) != 0 + + def __gt__(self, other): + return self._compare(other) > 0 + + def __ge__(self, other): + return self._compare(other) >= 0 + + def __repr__(self): + return "NumpyVersion(%s)" % self.vstring diff --git a/venv/lib/python3.12/site-packages/numpy/lib/_version.pyi b/venv/lib/python3.12/site-packages/numpy/lib/_version.pyi new file mode 100644 index 0000000000000000000000000000000000000000..1c82c99b686e2be8e34a1b6bc45dacce15532082 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/_version.pyi @@ -0,0 +1,17 @@ +__all__: list[str] + +class NumpyVersion: + vstring: str + version: str + major: int + minor: int + bugfix: int + pre_release: str + is_devversion: bool + def __init__(self, vstring: str) -> None: ... + def __lt__(self, other: str | NumpyVersion) -> bool: ... + def __le__(self, other: str | NumpyVersion) -> bool: ... + def __eq__(self, other: str | NumpyVersion) -> bool: ... # type: ignore[override] + def __ne__(self, other: str | NumpyVersion) -> bool: ... # type: ignore[override] + def __gt__(self, other: str | NumpyVersion) -> bool: ... + def __ge__(self, other: str | NumpyVersion) -> bool: ... diff --git a/venv/lib/python3.12/site-packages/numpy/lib/array_utils.py b/venv/lib/python3.12/site-packages/numpy/lib/array_utils.py new file mode 100644 index 0000000000000000000000000000000000000000..b4e7976131d268b307d8ac3bb13034d9e425f6e6 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/array_utils.py @@ -0,0 +1,7 @@ +from ._array_utils_impl import ( + __all__, + __doc__, + byte_bounds, + normalize_axis_index, + normalize_axis_tuple, +) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/array_utils.pyi b/venv/lib/python3.12/site-packages/numpy/lib/array_utils.pyi new file mode 100644 index 0000000000000000000000000000000000000000..4b9ebe334a1f211a21aac0cfd1605166ca909d1b --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/array_utils.pyi @@ -0,0 +1,6 @@ +from ._array_utils_impl import ( + __all__ as __all__, + byte_bounds as byte_bounds, + normalize_axis_index as normalize_axis_index, + normalize_axis_tuple as normalize_axis_tuple, +) diff --git a/venv/lib/python3.12/site-packages/numpy/lib/format.py b/venv/lib/python3.12/site-packages/numpy/lib/format.py new file mode 100644 index 0000000000000000000000000000000000000000..a904034598488bb1ebd7d6ea9cf082ae178596d7 --- /dev/null +++ b/venv/lib/python3.12/site-packages/numpy/lib/format.py @@ -0,0 +1,1015 @@ +""" +Binary serialization + +NPY format +========== + +A simple format for saving numpy arrays to disk with the full +information about them. + +The ``.npy`` format is the standard binary file format in NumPy for +persisting a *single* arbitrary NumPy array on disk. The format stores all +of the shape and dtype information necessary to reconstruct the array +correctly even on another machine with a different architecture. +The format is designed to be as simple as possible while achieving +its limited goals. + +The ``.npz`` format is the standard format for persisting *multiple* NumPy +arrays on disk. A ``.npz`` file is a zip file containing multiple ``.npy`` +files, one for each array. + +Capabilities +------------ + +- Can represent all NumPy arrays including nested record arrays and + object arrays. + +- Represents the data in its native binary form. + +- Supports Fortran-contiguous arrays directly. + +- Stores all of the necessary information to reconstruct the array + including shape and dtype on a machine of a different + architecture. Both little-endian and big-endian arrays are + supported, and a file with little-endian numbers will yield + a little-endian array on any machine reading the file. The + types are described in terms of their actual sizes. For example, + if a machine with a 64-bit C "long int" writes out an array with + "long ints", a reading machine with 32-bit C "long ints" will yield + an array with 64-bit integers. + +- Is straightforward to reverse engineer. Datasets often live longer than + the programs that created them. A competent developer should be + able to create a solution in their preferred programming language to + read most ``.npy`` files that they have been given without much + documentation. + +- Allows memory-mapping of the data. See `open_memmap`. + +- Can be read from a filelike stream object instead of an actual file. + +- Stores object arrays, i.e. arrays containing elements that are arbitrary + Python objects. Files with object arrays are not to be mmapable, but + can be read and written to disk. + +Limitations +----------- + +- Arbitrary subclasses of numpy.ndarray are not completely preserved. + Subclasses will be accepted for writing, but only the array data will + be written out. A regular numpy.ndarray object will be created + upon reading the file. + +.. warning:: + + Due to limitations in the interpretation of structured dtypes, dtypes + with fields with empty names will have the names replaced by 'f0', 'f1', + etc. Such arrays will not round-trip through the format entirely + accurately. The data is intact; only the field names will differ. We are + working on a fix for this. This fix will not require a change in the + file format. The arrays with such structures can still be saved and + restored, and the correct dtype may be restored by using the + ``loadedarray.view(correct_dtype)`` method. + +File extensions +--------------- + +We recommend using the ``.npy`` and ``.npz`` extensions for files saved +in this format. This is by no means a requirement; applications may wish +to use these file formats but use an extension specific to the +application. In the absence of an obvious alternative, however, +we suggest using ``.npy`` and ``.npz``. + +Version numbering +----------------- + +The version numbering of these formats is independent of NumPy version +numbering. If the format is upgraded, the code in `numpy.io` will still +be able to read and write Version 1.0 files. + +Format Version 1.0 +------------------ + +The first 6 bytes are a magic string: exactly ``\\x93NUMPY``. + +The next 1 byte is an unsigned byte: the major version number of the file +format, e.g. ``\\x01``. + +The next 1 byte is an unsigned byte: the minor version number of the file +format, e.g. ``\\x00``. Note: the version of the file format is not tied +to the version of the numpy package. + +The next 2 bytes form a little-endian unsigned short int: the length of +the header data HEADER_LEN. + +The next HEADER_LEN bytes form the header data describing the array's +format. It is an ASCII string which contains a Python literal expression +of a dictionary. It is terminated by a newline (``\\n``) and padded with +spaces (``\\x20``) to make the total of +``len(magic string) + 2 + len(length) + HEADER_LEN`` be evenly divisible +by 64 for alignment purposes. + +The dictionary contains three keys: + + "descr" : dtype.descr + An object that can be passed as an argument to the `numpy.dtype` + constructor to create the array's dtype. + "fortran_order" : bool + Whether the array data is Fortran-contiguous or not. Since + Fortran-contiguous arrays are a common form of non-C-contiguity, + we allow them to be written directly to disk for efficiency. + "shape" : tuple of int + The shape of the array. + +For repeatability and readability, the dictionary keys are sorted in +alphabetic order. This is for convenience only. A writer SHOULD implement +this if possible. A reader MUST NOT depend on this. + +Following the header comes the array data. If the dtype contains Python +objects (i.e. ``dtype.hasobject is True``), then the data is a Python +pickle of the array. Otherwise the data is the contiguous (either C- +or Fortran-, depending on ``fortran_order``) bytes of the array. +Consumers can figure out the number of bytes by multiplying the number +of elements given by the shape (noting that ``shape=()`` means there is +1 element) by ``dtype.itemsize``. + +Format Version 2.0 +------------------ + +The version 1.0 format only allowed the array header to have a total size of +65535 bytes. This can be exceeded by structured arrays with a large number of +columns. The version 2.0 format extends the header size to 4 GiB. +`numpy.save` will automatically save in 2.0 format if the data requires it, +else it will always use the more compatible 1.0 format. + +The description of the fourth element of the header therefore has become: +"The next 4 bytes form a little-endian unsigned int: the length of the header +data HEADER_LEN." + +Format Version 3.0 +------------------ + +This version replaces the ASCII string (which in practice was latin1) with +a utf8-encoded string, so supports structured types with any unicode field +names. + +Notes +----- +The ``.npy`` format, including motivation for creating it and a comparison of +alternatives, is described in the +:doc:`"npy-format" NEP `, however details have +evolved with time and this document is more current. + +""" +import io +import os +import pickle +import warnings + +import numpy +from numpy.lib._utils_impl import drop_metadata + + +__all__ = [] + + +EXPECTED_KEYS = {'descr', 'fortran_order', 'shape'} +MAGIC_PREFIX = b'\x93NUMPY' +MAGIC_LEN = len(MAGIC_PREFIX) + 2 +ARRAY_ALIGN = 64 # plausible values are powers of 2 between 16 and 4096 +BUFFER_SIZE = 2**18 # size of buffer for reading npz files in bytes +# allow growth within the address space of a 64 bit machine along one axis +GROWTH_AXIS_MAX_DIGITS = 21 # = len(str(8*2**64-1)) hypothetical int1 dtype + +# difference between version 1.0 and 2.0 is a 4 byte (I) header length +# instead of 2 bytes (H) allowing storage of large structured arrays +_header_size_info = { + (1, 0): (' 255: + raise ValueError("major version must be 0 <= major < 256") + if minor < 0 or minor > 255: + raise ValueError("minor version must be 0 <= minor < 256") + return MAGIC_PREFIX + bytes([major, minor]) + +def read_magic(fp): + """ Read the magic string to get the version of the file format. + + Parameters + ---------- + fp : filelike object + + Returns + ------- + major : int + minor : int + """ + magic_str = _read_bytes(fp, MAGIC_LEN, "magic string") + if magic_str[:-2] != MAGIC_PREFIX: + msg = "the magic string is not correct; expected %r, got %r" + raise ValueError(msg % (MAGIC_PREFIX, magic_str[:-2])) + major, minor = magic_str[-2:] + return major, minor + + +def dtype_to_descr(dtype): + """ + Get a serializable descriptor from the dtype. + + The .descr attribute of a dtype object cannot be round-tripped through + the dtype() constructor. Simple types, like dtype('float32'), have + a descr which looks like a record array with one field with '' as + a name. The dtype() constructor interprets this as a request to give + a default name. Instead, we construct descriptor that can be passed to + dtype(). + + Parameters + ---------- + dtype : dtype + The dtype of the array that will be written to disk. + + Returns + ------- + descr : object + An object that can be passed to `numpy.dtype()` in order to + replicate the input dtype. + + """ + # NOTE: that drop_metadata may not return the right dtype e.g. for user + # dtypes. In that case our code below would fail the same, though. + new_dtype = drop_metadata(dtype) + if new_dtype is not dtype: + warnings.warn("metadata on a dtype is not saved to an npy/npz. " + "Use another format (such as pickle) to store it.", + UserWarning, stacklevel=2) + dtype = new_dtype + + if dtype.names is not None: + # This is a record array. The .descr is fine. XXX: parts of the + # record array with an empty name, like padding bytes, still get + # fiddled with. This needs to be fixed in the C implementation of + # dtype(). + return dtype.descr + elif not type(dtype)._legacy: + # this must be a user-defined dtype since numpy does not yet expose any + # non-legacy dtypes in the public API + # + # non-legacy dtypes don't yet have __array_interface__ + # support. Instead, as a hack, we use pickle to save the array, and lie + # that the dtype is object. When the array is loaded, the descriptor is + # unpickled with the array and the object dtype in the header is + # discarded. + # + # a future NEP should define a way to serialize user-defined + # descriptors and ideally work out the possible security implications + warnings.warn("Custom dtypes are saved as python objects using the " + "pickle protocol. Loading this file requires " + "allow_pickle=True to be set.", + UserWarning, stacklevel=2) + return "|O" + else: + return dtype.str + +def descr_to_dtype(descr): + """ + Returns a dtype based off the given description. + + This is essentially the reverse of `~lib.format.dtype_to_descr`. It will + remove the valueless padding fields created by, i.e. simple fields like + dtype('float32'), and then convert the description to its corresponding + dtype. + + Parameters + ---------- + descr : object + The object retrieved by dtype.descr. Can be passed to + `numpy.dtype` in order to replicate the input dtype. + + Returns + ------- + dtype : dtype + The dtype constructed by the description. + + """ + if isinstance(descr, str): + # No padding removal needed + return numpy.dtype(descr) + elif isinstance(descr, tuple): + # subtype, will always have a shape descr[1] + dt = descr_to_dtype(descr[0]) + return numpy.dtype((dt, descr[1])) + + titles = [] + names = [] + formats = [] + offsets = [] + offset = 0 + for field in descr: + if len(field) == 2: + name, descr_str = field + dt = descr_to_dtype(descr_str) + else: + name, descr_str, shape = field + dt = numpy.dtype((descr_to_dtype(descr_str), shape)) + + # Ignore padding bytes, which will be void bytes with '' as name + # Once support for blank names is removed, only "if name == ''" needed) + is_pad = (name == '' and dt.type is numpy.void and dt.names is None) + if not is_pad: + title, name = name if isinstance(name, tuple) else (None, name) + titles.append(title) + names.append(name) + formats.append(dt) + offsets.append(offset) + offset += dt.itemsize + + return numpy.dtype({'names': names, 'formats': formats, 'titles': titles, + 'offsets': offsets, 'itemsize': offset}) + +def header_data_from_array_1_0(array): + """ Get the dictionary of header metadata from a numpy.ndarray. + + Parameters + ---------- + array : numpy.ndarray + + Returns + ------- + d : dict + This has the appropriate entries for writing its string representation + to the header of the file. + """ + d = {'shape': array.shape} + if array.flags.c_contiguous: + d['fortran_order'] = False + elif array.flags.f_contiguous: + d['fortran_order'] = True + else: + # Totally non-contiguous data. We will have to make it C-contiguous + # before writing. Note that we need to test for C_CONTIGUOUS first + # because a 1-D array is both C_CONTIGUOUS and F_CONTIGUOUS. + d['fortran_order'] = False + + d['descr'] = dtype_to_descr(array.dtype) + return d + + +def _wrap_header(header, version): + """ + Takes a stringified header, and attaches the prefix and padding to it + """ + import struct + assert version is not None + fmt, encoding = _header_size_info[version] + header = header.encode(encoding) + hlen = len(header) + 1 + padlen = ARRAY_ALIGN - ((MAGIC_LEN + struct.calcsize(fmt) + hlen) % ARRAY_ALIGN) + try: + header_prefix = magic(*version) + struct.pack(fmt, hlen + padlen) + except struct.error: + msg = "Header length {} too big for version={}".format(hlen, version) + raise ValueError(msg) from None + + # Pad the header with spaces and a final newline such that the magic + # string, the header-length short and the header are aligned on a + # ARRAY_ALIGN byte boundary. This supports memory mapping of dtypes + # aligned up to ARRAY_ALIGN on systems like Linux where mmap() + # offset must be page-aligned (i.e. the beginning of the file). + return header_prefix + header + b' '*padlen + b'\n' + + +def _wrap_header_guess_version(header): + """ + Like `_wrap_header`, but chooses an appropriate version given the contents + """ + try: + return _wrap_header(header, (1, 0)) + except ValueError: + pass + + try: + ret = _wrap_header(header, (2, 0)) + except UnicodeEncodeError: + pass + else: + warnings.warn("Stored array in format 2.0. It can only be" + "read by NumPy >= 1.9", UserWarning, stacklevel=2) + return ret + + header = _wrap_header(header, (3, 0)) + warnings.warn("Stored array in format 3.0. It can only be " + "read by NumPy >= 1.17", UserWarning, stacklevel=2) + return header + + +def _write_array_header(fp, d, version=None): + """ Write the header for an array and returns the version used + + Parameters + ---------- + fp : filelike object + d : dict + This has the appropriate entries for writing its string representation + to the header of the file. + version : tuple or None + None means use oldest that works. Providing an explicit version will + raise a ValueError if the format does not allow saving this data. + Default: None + """ + header = ["{"] + for key, value in sorted(d.items()): + # Need to use repr here, since we eval these when reading + header.append("'%s': %s, " % (key, repr(value))) + header.append("}") + header = "".join(header) + + # Add some spare space so that the array header can be modified in-place + # when changing the array size, e.g. when growing it by appending data at + # the end. + shape = d['shape'] + header += " " * ((GROWTH_AXIS_MAX_DIGITS - len(repr( + shape[-1 if d['fortran_order'] else 0] + ))) if len(shape) > 0 else 0) + + if version is None: + header = _wrap_header_guess_version(header) + else: + header = _wrap_header(header, version) + fp.write(header) + +def write_array_header_1_0(fp, d): + """ Write the header for an array using the 1.0 format. + + Parameters + ---------- + fp : filelike object + d : dict + This has the appropriate entries for writing its string + representation to the header of the file. + """ + _write_array_header(fp, d, (1, 0)) + + +def write_array_header_2_0(fp, d): + """ Write the header for an array using the 2.0 format. + The 2.0 format allows storing very large structured arrays. + + .. versionadded:: 1.9.0 + + Parameters + ---------- + fp : filelike object + d : dict + This has the appropriate entries for writing its string + representation to the header of the file. + """ + _write_array_header(fp, d, (2, 0)) + +def read_array_header_1_0(fp, max_header_size=_MAX_HEADER_SIZE): + """ + Read an array header from a filelike object using the 1.0 file format + version. + + This will leave the file object located just after the header. + + Parameters + ---------- + fp : filelike object + A file object or something with a `.read()` method like a file. + + Returns + ------- + shape : tuple of int + The shape of the array. + fortran_order : bool + The array data will be written out directly if it is either + C-contiguous or Fortran-contiguous. Otherwise, it will be made + contiguous before writing it out. + dtype : dtype + The dtype of the file's data. + max_header_size : int, optional + Maximum allowed size of the header. Large headers may not be safe + to load securely and thus require explicitly passing a larger value. + See :py:func:`ast.literal_eval()` for details. + + Raises + ------ + ValueError + If the data is invalid. + + """ + return _read_array_header( + fp, version=(1, 0), max_header_size=max_header_size) + +def read_array_header_2_0(fp, max_header_size=_MAX_HEADER_SIZE): + """ + Read an array header from a filelike object using the 2.0 file format + version. + + This will leave the file object located just after the header. + + .. versionadded:: 1.9.0 + + Parameters + ---------- + fp : filelike object + A file object or something with a `.read()` method like a file. + max_header_size : int, optional + Maximum allowed size of the header. Large headers may not be safe + to load securely and thus require explicitly passing a larger value. + See :py:func:`ast.literal_eval()` for details. + + Returns + ------- + shape : tuple of int + The shape of the array. + fortran_order : bool + The array data will be written out directly if it is either + C-contiguous or Fortran-contiguous. Otherwise, it will be made + contiguous before writing it out. + dtype : dtype + The dtype of the file's data. + + Raises + ------ + ValueError + If the data is invalid. + + """ + return _read_array_header( + fp, version=(2, 0), max_header_size=max_header_size) + + +def _filter_header(s): + """Clean up 'L' in npz header ints. + + Cleans up the 'L' in strings representing integers. Needed to allow npz + headers produced in Python2 to be read in Python3. + + Parameters + ---------- + s : string + Npy file header. + + Returns + ------- + header : str + Cleaned up header. + + """ + import tokenize + from io import StringIO + + tokens = [] + last_token_was_number = False + for token in tokenize.generate_tokens(StringIO(s).readline): + token_type = token[0] + token_string = token[1] + if (last_token_was_number and + token_type == tokenize.NAME and + token_string == "L"): + continue + else: + tokens.append(token) + last_token_was_number = (token_type == tokenize.NUMBER) + return tokenize.untokenize(tokens) + + +def _read_array_header(fp, version, max_header_size=_MAX_HEADER_SIZE): + """ + see read_array_header_1_0 + """ + # Read an unsigned, little-endian short int which has the length of the + # header. + import ast + import struct + hinfo = _header_size_info.get(version) + if hinfo is None: + raise ValueError("Invalid version {!r}".format(version)) + hlength_type, encoding = hinfo + + hlength_str = _read_bytes(fp, struct.calcsize(hlength_type), "array header length") + header_length = struct.unpack(hlength_type, hlength_str)[0] + header = _read_bytes(fp, header_length, "array header") + header = header.decode(encoding) + if len(header) > max_header_size: + raise ValueError( + f"Header info length ({len(header)}) is large and may not be safe " + "to load securely.\n" + "To allow loading, adjust `max_header_size` or fully trust " + "the `.npy` file using `allow_pickle=True`.\n" + "For safety against large resource use or crashes, sandboxing " + "may be necessary.") + + # The header is a pretty-printed string representation of a literal + # Python dictionary with trailing newlines padded to a ARRAY_ALIGN byte + # boundary. The keys are strings. + # "shape" : tuple of int + # "fortran_order" : bool + # "descr" : dtype.descr + # Versions (2, 0) and (1, 0) could have been created by a Python 2 + # implementation before header filtering was implemented. + # + # For performance reasons, we try without _filter_header first though + try: + d = ast.literal_eval(header) + except SyntaxError as e: + if version <= (2, 0): + header = _filter_header(header) + try: + d = ast.literal_eval(header) + except SyntaxError as e2: + msg = "Cannot parse header: {!r}" + raise ValueError(msg.format(header)) from e2 + else: + warnings.warn( + "Reading `.npy` or `.npz` file required additional " + "header parsing as it was created on Python 2. Save the " + "file again to speed up loading and avoid this warning.", + UserWarning, stacklevel=4) + else: + msg = "Cannot parse header: {!r}" + raise ValueError(msg.format(header)) from e + if not isinstance(d, dict): + msg = "Header is not a dictionary: {!r}" + raise ValueError(msg.format(d)) + + if EXPECTED_KEYS != d.keys(): + keys = sorted(d.keys()) + msg = "Header does not contain the correct keys: {!r}" + raise ValueError(msg.format(keys)) + + # Sanity-check the values. + if (not isinstance(d['shape'], tuple) or + not all(isinstance(x, int) for x in d['shape'])): + msg = "shape is not valid: {!r}" + raise ValueError(msg.format(d['shape'])) + if not isinstance(d['fortran_order'], bool): + msg = "fortran_order is not a valid bool: {!r}" + raise ValueError(msg.format(d['fortran_order'])) + try: + dtype = descr_to_dtype(d['descr']) + except TypeError as e: + msg = "descr is not a valid dtype descriptor: {!r}" + raise ValueError(msg.format(d['descr'])) from e + + return d['shape'], d['fortran_order'], dtype + +def write_array(fp, array, version=None, allow_pickle=True, pickle_kwargs=None): + """ + Write an array to an NPY file, including a header. + + If the array is neither C-contiguous nor Fortran-contiguous AND the + file_like object is not a real file object, this function will have to + copy data in memory. + + Parameters + ---------- + fp : file_like object + An open, writable file object, or similar object with a + ``.write()`` method. + array : ndarray + The array to write to disk. + version : (int, int) or None, optional + The version number of the format. None means use the oldest + supported version that is able to store the data. Default: None + allow_pickle : bool, optional + Whether to allow writing pickled data. Default: True + pickle_kwargs : dict, optional + Additional keyword arguments to pass to pickle.dump, excluding + 'protocol'. These are only useful when pickling objects in object + arrays on Python 3 to Python 2 compatible format. + + Raises + ------ + ValueError + If the array cannot be persisted. This includes the case of + allow_pickle=False and array being an object array. + Various other errors + If the array contains Python objects as part of its dtype, the + process of pickling them may raise various errors if the objects + are not picklable. + + """ + _check_version(version) + _write_array_header(fp, header_data_from_array_1_0(array), version) + + if array.itemsize == 0: + buffersize = 0 + else: + # Set buffer size to 16 MiB to hide the Python loop overhead. + buffersize = max(16 * 1024 ** 2 // array.itemsize, 1) + + dtype_class = type(array.dtype) + + if array.dtype.hasobject or not dtype_class._legacy: + # We contain Python objects so we cannot write out the data + # directly. Instead, we will pickle it out + if not allow_pickle: + if array.dtype.hasobject: + raise ValueError("Object arrays cannot be saved when " + "allow_pickle=False") + if not dtype_class._legacy: + raise ValueError("User-defined dtypes cannot be saved " + "when allow_pickle=False") + if pickle_kwargs is None: + pickle_kwargs = {} + pickle.dump(array, fp, protocol=4, **pickle_kwargs) + elif array.flags.f_contiguous and not array.flags.c_contiguous: + if isfileobj(fp): + array.T.tofile(fp) + else: + for chunk in numpy.nditer( + array, flags=['external_loop', 'buffered', 'zerosize_ok'], + buffersize=buffersize, order='F'): + fp.write(chunk.tobytes('C')) + else: + if isfileobj(fp): + array.tofile(fp) + else: + for chunk in numpy.nditer( + array, flags=['external_loop', 'buffered', 'zerosize_ok'], + buffersize=buffersize, order='C'): + fp.write(chunk.tobytes('C')) + + +def read_array(fp, allow_pickle=False, pickle_kwargs=None, *, + max_header_size=_MAX_HEADER_SIZE): + """ + Read an array from an NPY file. + + Parameters + ---------- + fp : file_like object + If this is not a real file object, then this may take extra memory + and time. + allow_pickle : bool, optional + Whether to allow writing pickled data. Default: False + + .. versionchanged:: 1.16.3 + Made default False in response to CVE-2019-6446. + + pickle_kwargs : dict + Additional keyword arguments to pass to pickle.load. These are only + useful when loading object arrays saved on Python 2 when using + Python 3. + max_header_size : int, optional + Maximum allowed size of the header. Large headers may not be safe + to load securely and thus require explicitly passing a larger value. + See :py:func:`ast.literal_eval()` for details. + This option is ignored when `allow_pickle` is passed. In that case + the file is by definition trusted and the limit is unnecessary. + + Returns + ------- + array : ndarray + The array from the data on disk. + + Raises + ------ + ValueError + If the data is invalid, or allow_pickle=False and the file contains + an object array. + + """ + if allow_pickle: + # Effectively ignore max_header_size, since `allow_pickle` indicates + # that the input is fully trusted. + max_header_size = 2**64 + + version = read_magic(fp) + _check_version(version) + shape, fortran_order, dtype = _read_array_header( + fp, version, max_header_size=max_header_size) + if len(shape) == 0: + count = 1 + else: + count = numpy.multiply.reduce(shape, dtype=numpy.int64) + + # Now read the actual data. + if dtype.hasobject: + # The array contained Python objects. We need to unpickle the data. + if not allow_pickle: + raise ValueError("Object arrays cannot be loaded when " + "allow_pickle=False") + if pickle_kwargs is None: + pickle_kwargs = {} + try: + array = pickle.load(fp, **pickle_kwargs) + except UnicodeError as err: + # Friendlier error message + raise UnicodeError("Unpickling a python object failed: %r\n" + "You may need to pass the encoding= option " + "to numpy.load" % (err,)) from err + else: + if isfileobj(fp): + # We can use the fast fromfile() function. + array = numpy.fromfile(fp, dtype=dtype, count=count) + else: + # This is not a real file. We have to read it the + # memory-intensive way. + # crc32 module fails on reads greater than 2 ** 32 bytes, + # breaking large reads from gzip streams. Chunk reads to + # BUFFER_SIZE bytes to avoid issue and reduce memory overhead + # of the read. In non-chunked case count < max_read_count, so + # only one read is performed. + + # Use np.ndarray instead of np.empty since the latter does + # not correctly instantiate zero-width string dtypes; see + # https://github.com/numpy/numpy/pull/6430 + array = numpy.ndarray(count, dtype=dtype) + + if dtype.itemsize > 0: + # If dtype.itemsize == 0 then there's nothing more to read + max_read_count = BUFFER_SIZE // min(BUFFER_SIZE, dtype.itemsize) + + for i in range(0, count, max_read_count): + read_count = min(max_read_count, count - i) + read_size = int(read_count * dtype.itemsize) + data = _read_bytes(fp, read_size, "array data") + array[i:i+read_count] = numpy.frombuffer(data, dtype=dtype, + count=read_count) + + if fortran_order: + array.shape = shape[::-1] + array = array.transpose() + else: + array.shape = shape + + return array + + +def open_memmap(filename, mode='r+', dtype=None, shape=None, + fortran_order=False, version=None, *, + max_header_size=_MAX_HEADER_SIZE): + """ + Open a .npy file as a memory-mapped array. + + This may be used to read an existing file or create a new one. + + Parameters + ---------- + filename : str or path-like + The name of the file on disk. This may *not* be a file-like + object. + mode : str, optional + The mode in which to open the file; the default is 'r+'. In + addition to the standard file modes, 'c' is also accepted to mean + "copy on write." See `memmap` for the available mode strings. + dtype : data-type, optional + The data type of the array if we are creating a new file in "write" + mode, if not, `dtype` is ignored. The default value is None, which + results in a data-type of `float64`. + shape : tuple of int + The shape of the array if we are creating a new file in "write" + mode, in which case this parameter is required. Otherwise, this + parameter is ignored and is thus optional. + fortran_order : bool, optional + Whether the array should be Fortran-contiguous (True) or + C-contiguous (False, the default) if we are creating a new file in + "write" mode. + version : tuple of int (major, minor) or None + If the mode is a "write" mode, then this is the version of the file + format used to create the file. None means use the oldest + supported version that is able to store the data. Default: None + max_header_size : int, optional + Maximum allowed size of the header. Large headers may not be safe + to load securely and thus require explicitly passing a larger value. + See :py:func:`ast.literal_eval()` for details. + + Returns + ------- + marray : memmap + The memory-mapped array. + + Raises + ------ + ValueError + If the data or the mode is invalid. + OSError + If the file is not found or cannot be opened correctly. + + See Also + -------- + numpy.memmap + + """ + if isfileobj(filename): + raise ValueError("Filename must be a string or a path-like object." + " Memmap cannot use existing file handles.") + + if 'w' in mode: + # We are creating the file, not reading it. + # Check if we ought to create the file. + _check_version(version) + # Ensure that the given dtype is an authentic dtype object rather + # than just something that can be interpreted as a dtype object. + dtype = numpy.dtype(dtype) + if dtype.hasobject: + msg = "Array can't be memory-mapped: Python objects in dtype." + raise ValueError(msg) + d = dict( + descr=dtype_to_descr(dtype), + fortran_order=fortran_order, + shape=shape, + ) + # If we got here, then it should be safe to create the file. + with open(os.fspath(filename), mode+'b') as fp: + _write_array_header(fp, d, version) + offset = fp.tell() + else: + # Read the header of the file first. + with open(os.fspath(filename), 'rb') as fp: + version = read_magic(fp) + _check_version(version) + + shape, fortran_order, dtype = _read_array_header( + fp, version, max_header_size=max_header_size) + if dtype.hasobject: + msg = "Array can't be memory-mapped: Python objects in dtype." + raise ValueError(msg) + offset = fp.tell() + + if fortran_order: + order = 'F' + else: + order = 'C' + + # We need to change a write-only mode to a read-write mode since we've + # already written data to the file. + if mode == 'w+': + mode = 'r+' + + marray = numpy.memmap(filename, dtype=dtype, shape=shape, order=order, + mode=mode, offset=offset) + + return marray + + +def _read_bytes(fp, size, error_template="ran out of data"): + """ + Read from file-like object until size bytes are read. + Raises ValueError if not EOF is encountered before size bytes are read. + Non-blocking objects only supported if they derive from io objects. + + Required as e.g. ZipExtFile in python 2.6 can return less data than + requested. + """ + data = bytes() + while True: + # io files (default in python3) return None or raise on + # would-block, python2 file will truncate, probably nothing can be + # done about that. note that regular files can't be non-blocking + try: + r = fp.read(size - len(data)) + data += r + if len(r) == 0 or len(data) == size: + break + except BlockingIOError: + pass + if len(data) != size: + msg = "EOF: reading %s, expected %d bytes got %d" + raise ValueError(msg % (error_template, size, len(data))) + else: + return data + + +def isfileobj(f): + if not isinstance(f, (io.FileIO, io.BufferedReader, io.BufferedWriter)): + return False + try: + # BufferedReader/Writer may raise OSError when + # fetching `fileno()` (e.g. when wrapping BytesIO). + f.fileno() + return True + except OSError: + return False