diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000030_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000030_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..b18ec9584c2bc2cb1df692cab26f2de822ea285a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000030_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02189:0.0259167,((AS2_ACLBLIBL_00410:5e-09,(AS2_ACLBLIBL_00389:5e-09,AS2_ACLBLIBL_00393:0.0302627)n3:0.0101513)n2:0.0101082,(KBS0714_MOLHKGIG_00627:0.0101356,(SA211_MHAAABBN_00372:0,TT9_LFPAFLNI_00604:0)n5:5e-09)n4:5e-09)n1:0.0259167)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000073_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000073_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..088d95c38b646eab23019bfc51cc22b749d34abc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000073_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00321:0.42353,((KBS0714_MOLHKGIG_00216:0,SA211_MHAAABBN_02209:0,TT9_LFPAFLNI_00216:0)n2:0.154358,(AS2_ACLBLIBL_02206:0.72379,AS2_ACLBLIBL_00167:0.045757)n3:0.00508411)n1:0.844921)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000078_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000078_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..52c0efd925382dea7153fb9891ef379f7ed8e2e6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000078_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02454:0.0315262,((KBS0714_MOLHKGIG_00366:0.00457497,(SA211_MHAAABBN_00082:0.00154096,TT9_LFPAFLNI_00373:0.00154183)n3:0.0031645)n2:0.0199633,(AS2_ACLBLIBL_00193:1.16516,AS2_ACLBLIBL_02595:0.037521)n4:0.004169)n1:0.0483287)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000125_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000125_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..6ff1f08f019c7126d023b9fb9aad64f2249a3366
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000125_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02311:0.00444868,((TT9_LFPAFLNI_00521:5e-09,(AS2_ACLBLIBL_02428:0.00892789,AS2_ACLBLIBL_01219:1.61464)n3:0.179404)n2:0.0301173,(SA211_MHAAABBN_00243:0.00592033,KBS0714_MOLHKGIG_00521:0.0118539)n4:5e-09)n1:0.00296109)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000127_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000127_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..90374d9ba9d81fdb1ffe1bda257cd437425737bc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000127_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02461:0.0259585,((AS2_ACLBLIBL_01252:1.21352,AS2_ACLBLIBL_02602:5e-09)n2:0.00852587,(KBS0714_MOLHKGIG_00359:5e-09,(SA211_MHAAABBN_00075:0.00420383,TT9_LFPAFLNI_00366:5e-09)n4:0.00421588)n3:0.00413123)n1:0.0259585)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000154_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000154_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..b07ea755ef3b6d4bd73a3b3055fb0259cc9c0fe3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000154_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01764:0.459075,((KBS0714_MOLHKGIG_01012:0,SA211_MHAAABBN_00726:0)n2:0.011003,(TT9_LFPAFLNI_00955:0.0190787,(AS2_ACLBLIBL_01877:0.0383644,AS2_ACLBLIBL_01876:0.0385183)n4:0.00427981)n3:0.0151453)n1:0.459075)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000172_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000172_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..ee0fa3ce24ff8871e5b41cd126ddf67988ff2273
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000172_tree.txt
@@ -0,0 +1 @@
+(((TT9_LFPAFLNI_02007:5e-09,(SA211_MHAAABBN_01774:0.0842955,SA211_MHAAABBN_00326:0.00616023)n3:0.00068447)n2:0.358886,KBS0714_MOLHKGIG_00614:0.0274874)n1:0.0739174,(KD337_NAFOICDF_00544:0.256101,KD337_NAFOICDF_00702:0.272871)n4:0.0739174)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000198_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000198_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..a2e3f4cfab584cf65ae43ffdc03bb26706bc874d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000198_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00033:0.0731573,(AS2_ACLBLIBL_00055:0.0423063,(KBS0714_MOLHKGIG_00299:0.00137662,(SA211_MHAAABBN_00007:0.00413042,TT9_LFPAFLNI_00306:0.00551784)n3:0.00136414)n2:0.0270947)n1:0.0731573)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000213_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000213_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..457a753ecbcff45620b207838d112a518e4d811f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000213_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00063:0.140575,(AS2_ACLBLIBL_00080:0.41379,(TT9_LFPAFLNI_00273:0.00769185,(KBS0714_MOLHKGIG_00275:0.00384032,SA211_MHAAABBN_02290:0.00387337)n3:5e-09)n2:0.252276)n1:0.140575)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000243_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000243_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..414acae82a5ea27867a98c43efd516a567ca5c4b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000243_tree.txt
@@ -0,0 +1 @@
+((AS2_ACLBLIBL_01863:0.525036,KD337_NAFOICDF_01752:0.197757)n1:0.366972,(AS2_ACLBLIBL_00149:0.869659,(KD337_NAFOICDF_01765:0.412877,KD337_NAFOICDF_01759:0.200242)n3:0.0222491)n2:0.317597)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000270_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000270_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..5078ad235a16e540ccf4ba8f8df607c02429dc4b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000270_tree.txt
@@ -0,0 +1 @@
+(AS2_ACLBLIBL_00209:0.0102022,(TT9_LFPAFLNI_00190:0.00593087,(SA211_MHAAABBN_02020:1.43964,(KBS0714_MOLHKGIG_00190:6e-09,KBS0714_MOLHKGIG_00035:0.808041)n3:0.0897823)n2:0.617169)n1:0.0102022)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000280_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000280_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..32ca3fe6f519e45ba29104730d3a6ecc7cb1d445
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000280_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00169:0.650968,(AS2_ACLBLIBL_00223:0.0149304,(SA211_MHAAABBN_02174:0.0251951,(KBS0714_MOLHKGIG_00178:0.00601323,TT9_LFPAFLNI_00175:0.0510235)n3:0.0144957)n2:0.0428155)n1:0.650968)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000287_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000287_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..93a25e2bc146d420c4155727b1796f1a926d44e5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000287_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00173:0.0190152,(AS2_ACLBLIBL_00238:0.0290484,(KBS0714_MOLHKGIG_00146:0.00886671,(TT9_LFPAFLNI_00154:0.00873807,SA211_MHAAABBN_02160:5e-09)n3:0.00273496)n2:0.0440574)n1:0.0190152)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000366_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000366_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..c505e15b5aa928a6dbeedf2492b6e5238c8f601e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000366_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00301:0.125032,(AS2_ACLBLIBL_00360:0.109715,(SA211_MHAAABBN_02053:0.00347483,(KBS0714_MOLHKGIG_00040:0.00648055,TT9_LFPAFLNI_00035:0.00983506)n3:0.00629262)n2:0.0960354)n1:0.125032)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000385_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000385_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..fd7be92928bce2753b1fe6cce8ee3d0d1c4721ca
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000385_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02195:0,(KBS0714_MOLHKGIG_00634:0.00404248,(TT9_LFPAFLNI_00597:0.024634,(AS2_ACLBLIBL_00406:0,AS2_ACLBLIBL_00753:1.25722)n3:0.139691)n2:5e-09)n1:5e-09)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000391_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000391_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..43d1dfbaf6a5955285ea6471c69e3b9dedc39670
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000391_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00373:0.0846994,(AS2_ACLBLIBL_00420:0.0477243,((KBS0714_MOLHKGIG_00004:0,SA211_MHAAABBN_02009:0)n3:0.00539401,TT9_LFPAFLNI_00004:6e-09)n2:0.0223467)n1:0.0846994)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000401_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000401_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..ad8e6254c5be7854f9a12a531e8eaa7d6291c6b9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000401_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00383:0.0608184,(AS2_ACLBLIBL_00430:0.0287768,(SA211_MHAAABBN_01999:0.00929069,(KBS0714_MOLHKGIG_02306:0.00928589,TT9_LFPAFLNI_02247:6e-09)n3:0.00308033)n2:0.036198)n1:0.0608184)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000406_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000406_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..998ac0173f2c079d55d637e2dec1910696057c77
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000406_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00393:0.0367796,(AS2_ACLBLIBL_00440:0.0231874,(KBS0714_MOLHKGIG_02296:0.00546354,(SA211_MHAAABBN_01989:0.00538894,TT9_LFPAFLNI_02237:5e-09)n3:0.00259871)n2:0.0130266)n1:0.0367796)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000407_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000407_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..fe60ac758ed9bfbd593e91e9762dcdf4279bcb1f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000407_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00394:0.124766,(AS2_ACLBLIBL_00441:0.0767483,(KBS0714_MOLHKGIG_02295:0.00479375,(SA211_MHAAABBN_01988:0.00198921,TT9_LFPAFLNI_02236:0.00614383)n3:0.0033759)n2:0.097513)n1:0.124766)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000417_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000417_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..bf0a64c2895ce053a797a6c96da20af9647f37e2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000417_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00404:0.104153,(AS2_ACLBLIBL_00451:0.0273051,(SA211_MHAAABBN_01977:5e-09,(KBS0714_MOLHKGIG_02286:0.00553803,TT9_LFPAFLNI_02225:0.00554589)n3:5e-09)n2:0.00692559)n1:0.104153)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000448_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000448_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..edd8856bb98f300ecc7450b8a9a330af17576d15
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000448_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00483:0.228641,(AS2_ACLBLIBL_00554:0.150307,(KBS0714_MOLHKGIG_02190:0.00571122,(SA211_MHAAABBN_01904:0.00246313,TT9_LFPAFLNI_02135:0.00981838)n3:0.00411855)n2:0.129918)n1:0.228641)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000459_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000459_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..6bdf747393474a8b55081c9258e506e4947305f6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000459_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00502:0.0909285,(AS2_ACLBLIBL_00575:0.27041,(KBS0714_MOLHKGIG_02177:0.0130392,(SA211_MHAAABBN_01891:0.00679946,TT9_LFPAFLNI_02122:0.0159158)n3:0.021478)n2:0.155009)n1:0.0909285)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000479_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000479_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..f318ae3720336da46bb6a91311e5aedf4701d8f5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000479_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00540:0.210927,((SA211_MHAAABBN_01858:0.0083631,TT9_LFPAFLNI_02088:0.00361057)n2:0.129259,(AS2_ACLBLIBL_02658:0.305772,AS2_ACLBLIBL_00616:0.0977326)n3:0.0108592)n1:0.167231)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000496_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000496_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..dea7f4067a814b78817814aabf3cebd759b0e2b1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000496_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00567:0.00296408,(AS2_ACLBLIBL_00651:0.00197205,(KBS0714_MOLHKGIG_02129:0.00591124,(SA211_MHAAABBN_01837:6e-09,TT9_LFPAFLNI_02067:0.00394418)n3:0.00198084)n2:0.00196844)n1:0.00296408)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000497_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000497_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..780e3244127772b8571da524feb2d47706d268f5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000497_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00568:0.00843566,(AS2_ACLBLIBL_00652:0.00279141,(KBS0714_MOLHKGIG_02128:0.00291319,(SA211_MHAAABBN_01836:0,TT9_LFPAFLNI_02066:0)n3:5e-09)n2:0.00984367)n1:0.00843566)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000499_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000499_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..99881106fe089e5dc8857412bfcc586e50642889
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000499_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00570:0.0132927,(AS2_ACLBLIBL_00654:0.00659911,(SA211_MHAAABBN_01834:5e-09,(KBS0714_MOLHKGIG_02126:0.00657533,TT9_LFPAFLNI_02064:0.0132028)n3:5e-09)n2:6e-09)n1:0.0132927)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000514_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000514_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..42eea717486e5e8f29c717cda2315e6177774207
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000514_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00590:0.154457,(AS2_ACLBLIBL_00674:0.109146,((KBS0714_MOLHKGIG_02105:0,SA211_MHAAABBN_01812:0)n3:0.00139466,TT9_LFPAFLNI_02045:0.00217604)n2:0.0670327)n1:0.154457)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000515_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000515_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..e102576743780e963c8df806013937bbd7f439e7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000515_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00593:0.0596395,(AS2_ACLBLIBL_00675:0.0696917,((KBS0714_MOLHKGIG_02104:0,SA211_MHAAABBN_01811:0)n3:0.00346965,TT9_LFPAFLNI_02044:5e-09)n2:0.0710451)n1:0.0596395)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000536_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000536_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..73be2e0631c5d78fcc2921c3246e56f0cb32e4df
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000536_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00126:0.156873,(AS2_ACLBLIBL_00769:0.0715487,(KBS0714_MOLHKGIG_02053:0.0108684,(SA211_MHAAABBN_01759:0.0124085,TT9_LFPAFLNI_01987:0.0108014)n3:0.00542294)n2:0.0748798)n1:0.156873)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000551_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000551_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..5c0a87d4c5adea6642a5b0354ee35c9328163e4a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000551_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00759:0.00340125,(AS2_ACLBLIBL_00798:0.0852773,(KBS0714_MOLHKGIG_02021:5e-09,(SA211_MHAAABBN_01730:0.0066719,TT9_LFPAFLNI_01958:0.0136659)n3:0.00685394)n2:5e-09)n1:0.00340125)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000579_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000579_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..df81b31c3415572dddf21c15770a9e5552842318
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000579_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00812:0.00356751,((AS2_ACLBLIBL_00877:0.342412,KBS0714_MOLHKGIG_01981:6e-09)n2:0.00177257,(SA211_MHAAABBN_01675:0.00177863,TT9_LFPAFLNI_01907:5e-09)n3:0.00178198)n1:0.00356751)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000588_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000588_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..408dd7d42bd81a21129eb0fde8397b24b71da832
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000588_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00832:0.167712,(SA211_MHAAABBN_01662:5e-09,(TT9_LFPAFLNI_01894:0.0236553,(AS2_ACLBLIBL_00891:0.0229202,KBS0714_MOLHKGIG_01968:0.0254241)n3:0.0071641)n2:0.00760877)n1:0.167712)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000596_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000596_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..a625b81aadba729cbcb99f2ff835a0cd961ee83a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000596_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00851:0.0046209,((SA211_MHAAABBN_01639:5e-09,TT9_LFPAFLNI_01862:0.00371045)n2:0.0037767,(AS2_ACLBLIBL_00913:0.0780708,KBS0714_MOLHKGIG_01943:0.00863567)n3:0.0025639)n1:0.0046209)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000621_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000621_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..be4b3b8f3652d0d00b7728b8d286d92f59850259
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000621_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00891:0.00514959,(AS2_ACLBLIBL_00951:0.0102183,((KBS0714_MOLHKGIG_01907:0,SA211_MHAAABBN_01603:0)n3:5e-09,TT9_LFPAFLNI_01827:5e-09)n2:0.0102511)n1:0.00514959)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000638_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000638_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..bf43f3d7b3d4fb4543572b982198da3e4d9cdc78
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000638_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00912:0.156789,(AS2_ACLBLIBL_00974:0.0834128,((KBS0714_MOLHKGIG_01884:0,TT9_LFPAFLNI_01804:0)n3:0.0184795,SA211_MHAAABBN_01580:0.0229641)n2:0.172417)n1:0.156789)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000643_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000643_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..ee20f8f35f3c803de26fdd303aa88033f32dc3b5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000643_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00921:0.0241286,((SA211_MHAAABBN_01572:0.00471145,TT9_LFPAFLNI_01796:0.00464167)n2:0.00356658,(AS2_ACLBLIBL_00983:0.00434436,KBS0714_MOLHKGIG_01876:0.00812546)n3:0.00321643)n1:0.0241286)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000654_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000654_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..9d14b8b091b0f162aebd9986e9a4b7cf81305a19
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000654_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00933:0.133215,(AS2_ACLBLIBL_00995:0.081023,(SA211_MHAAABBN_01561:0.00491776,(KBS0714_MOLHKGIG_01865:5e-09,TT9_LFPAFLNI_01785:0.00722093)n3:0.0022837)n2:0.0699369)n1:0.133215)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000656_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000656_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..87d9ca2b373403a9a738d19197ed4224aef35905
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000656_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00936:0.225682,(AS2_ACLBLIBL_00997:0.0778884,(TT9_LFPAFLNI_01783:5e-09,(SA211_MHAAABBN_01559:0.0232622,KBS0714_MOLHKGIG_01863:0.00252254)n3:0.00250686)n2:0.108456)n1:0.225682)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000664_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000664_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..5d4785c910be7e88e243675e963c362ddbbcaf49
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000664_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00951:0.0937729,(AS2_ACLBLIBL_01007:0.0602797,(SA211_MHAAABBN_01553:0.00252671,(KBS0714_MOLHKGIG_01857:0.00253226,TT9_LFPAFLNI_01777:0.00758414)n3:0.00253609)n2:0.0285645)n1:0.0937729)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000714_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000714_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..df91cc66fa08349a61e64fac992d37eb891b0d0c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000714_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01015:0.134621,((SA211_MHAAABBN_01494:0.00200052,TT9_LFPAFLNI_01716:5e-09)n2:5e-09,(KBS0714_MOLHKGIG_01787:0.00602665,AS2_ACLBLIBL_01089:0.00435728)n3:0.00199761)n1:0.134621)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000719_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000719_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..43378799f68be2491f971d8fb6472363178ba438
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000719_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01020:0.365818,(AS2_ACLBLIBL_01097:0.166573,(SA211_MHAAABBN_01488:0.00433275,(KBS0714_MOLHKGIG_01781:5e-09,TT9_LFPAFLNI_01710:0.00351566)n3:0.00991492)n2:0.0874962)n1:0.365818)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000784_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000784_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..74c2c7eb452249173ba0aa3545a29b6500c93d3a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000784_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01101:0.0153161,(AS2_ACLBLIBL_01171:0.0131224,(KBS0714_MOLHKGIG_01707:0,SA211_MHAAABBN_01414:0,TT9_LFPAFLNI_01636:0)n2:0.0137886)n1:0.0153161)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000785_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000785_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..59022f72db861e8d2a3e4d224eeceabaf176b560
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000785_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01102:0.0191937,(AS2_ACLBLIBL_01172:0.00748055,(KBS0714_MOLHKGIG_01706:0,SA211_MHAAABBN_01413:0,TT9_LFPAFLNI_01635:0)n2:5e-09)n1:0.0191937)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000793_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000793_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..6b995f900f2da38b883e7c74e86f97dc338523be
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000793_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01110:0.0751001,(AS2_ACLBLIBL_01180:0.0357574,(KBS0714_MOLHKGIG_01698:0.00354723,(SA211_MHAAABBN_01405:5e-09,TT9_LFPAFLNI_01627:0.0070171)n3:0.00700806)n2:0.070247)n1:0.0751001)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000809_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000809_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..cce352f831ce61f271b759c2b7801a6f64e7086a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000809_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01128:0.0669058,(AS2_ACLBLIBL_01200:0.0540152,((KBS0714_MOLHKGIG_01678:0,SA211_MHAAABBN_01383:0)n3:0.00475759,TT9_LFPAFLNI_01608:0.00526659)n2:0.0340536)n1:0.0669058)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000817_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000817_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..39d3027754ad872e1c355aa7669f4c3e0912cf50
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000817_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01136:0.0585675,(AS2_ACLBLIBL_01208:0.00727363,(KBS0714_MOLHKGIG_01670:0.00265228,(SA211_MHAAABBN_01375:0.00271818,TT9_LFPAFLNI_01600:0.00530175)n3:5e-09)n2:0.00900774)n1:0.0585675)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000838_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000838_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..5babc6017931e237a243480769a3d094c9ce97df
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000838_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01158:0.0977231,(AS2_ACLBLIBL_01247:0.160746,(KBS0714_MOLHKGIG_01646:0.0100722,(SA211_MHAAABBN_01351:0.00996988,TT9_LFPAFLNI_01576:5e-09)n3:5e-09)n2:0.0877798)n1:0.0977231)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000855_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000855_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..bf0667c33038280ceffe67b57fd6f82edeb7ad38
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000855_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01181:0.0627943,(SA211_MHAAABBN_01332:0.115681,(AS2_ACLBLIBL_01271:0.0950423,(KBS0714_MOLHKGIG_01626:5e-09,TT9_LFPAFLNI_01555:0.00622469)n3:0.0533561)n2:0.0708003)n1:0.0627943)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000874_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000874_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..5b4b79bf2f400ed5a5545130e330e89a20116aaa
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000874_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01241:0.0850642,(AS2_ACLBLIBL_01348:0.0855369,(KBS0714_MOLHKGIG_01576:0.00333276,(SA211_MHAAABBN_01286:0.0031847,TT9_LFPAFLNI_01503:5e-09)n3:0.00304149)n2:0.134237)n1:0.0850642)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000900_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000900_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..3e440cd8ee57804020d8b725179ba971e047041d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000900_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01270:0.0902753,(AS2_ACLBLIBL_01379:0.0648349,((KBS0714_MOLHKGIG_01546:0,SA211_MHAAABBN_01256:0)n3:0.0203694,TT9_LFPAFLNI_01473:0.0114445)n2:0.0412066)n1:0.0902753)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000915_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000915_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..43e5d93c370e309302ad5cda01c45a0961f3cc1f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000915_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01286:0.0736094,(AS2_ACLBLIBL_01395:0.0493442,(TT9_LFPAFLNI_01457:0.0051813,(KBS0714_MOLHKGIG_01530:0.00281859,SA211_MHAAABBN_01240:0.00497489)n3:0.00549746)n2:0.0322346)n1:0.0736094)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000948_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000948_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..48735154be155649db13d62d6363c2a69c7780a9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000948_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01333:0.304437,(AS2_ACLBLIBL_01431:0.101723,(TT9_LFPAFLNI_01419:0.0140029,(KBS0714_MOLHKGIG_01469:0.00667108,SA211_MHAAABBN_01201:0.015481)n3:0.0139899)n2:0.129444)n1:0.304437)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000963_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000963_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..ce0ae9a6b2352e04a63fdc3ff8499c88a812770d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000963_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01349:0.0158804,(AS2_ACLBLIBL_01446:0.0155941,(KBS0714_MOLHKGIG_01454:0,SA211_MHAAABBN_01186:0,TT9_LFPAFLNI_01404:0)n2:0.0153831)n1:0.0158804)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000982_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000982_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..85b153d6fe11a57189f4bf6a4332a9c43a07f2e1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000982_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01375:0.0183631,(AS2_ACLBLIBL_01468:0.0209682,(SA211_MHAAABBN_01163:0.00243612,(KBS0714_MOLHKGIG_01431:0.00479112,TT9_LFPAFLNI_01381:5e-09)n3:0.00236465)n2:0.00610442)n1:0.0183631)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000997_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000997_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..b2974bf94cf82664c3222242220e593e711fe036
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000997_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01394:0.0784116,(AS2_ACLBLIBL_01487:0.0312418,(SA211_MHAAABBN_01143:0.00368271,(KBS0714_MOLHKGIG_01412:0.00739766,TT9_LFPAFLNI_01362:0.00807673)n3:0.00309779)n2:0.0271802)n1:0.0784116)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000999_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000999_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..2c45a1c28b28ae4d70e3795e9bc5a923374b52fa
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0000999_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01401:0.122189,(AS2_ACLBLIBL_01490:0.0934161,((KBS0714_MOLHKGIG_01406:0,TT9_LFPAFLNI_01356:0)n3:5e-09,SA211_MHAAABBN_01136:0.0025075)n2:0.0435086)n1:0.122189)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001019_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001019_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..ed1ec174e2113872ba7cff4e722d748398f999e8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001019_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01425:0.0583451,(AS2_ACLBLIBL_01530:5e-09,((KBS0714_MOLHKGIG_01363:0,TT9_LFPAFLNI_01318:0)n3:0.00698559,SA211_MHAAABBN_01083:5e-09)n2:0.00699841)n1:0.0583451)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001025_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001025_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..4ff4b95548118597664b1c4eaddbee0c3de32177
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001025_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01432:0.0672852,(AS2_ACLBLIBL_01536:0.0603789,(SA211_MHAAABBN_01076:0.00178013,(KBS0714_MOLHKGIG_01356:0.0129322,TT9_LFPAFLNI_01311:0.00354836)n3:0.00385426)n2:0.0637872)n1:0.0672852)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001055_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001055_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..4bc64ac8bae7946ca0d199a00ebf8433f273b61f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001055_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01464:0.148268,(AS2_ACLBLIBL_01568:0.0848788,((KBS0714_MOLHKGIG_01323:0,TT9_LFPAFLNI_01279:0)n3:0.00631855,SA211_MHAAABBN_01044:5e-09)n2:0.0572524)n1:0.148268)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001058_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001058_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..684d4780305d24f4ed1da8b9d30ca3a182889634
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001058_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01467:0.110406,(AS2_ACLBLIBL_01571:0.0143038,((KBS0714_MOLHKGIG_01320:0,SA211_MHAAABBN_01041:0)n3:5e-09,TT9_LFPAFLNI_01276:0.0139836)n2:0.0287052)n1:0.110406)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001070_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001070_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..e3f4be46689bcd43602804b0915d87b332361f44
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001070_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01483:0.0145909,(AS2_ACLBLIBL_01587:0.019508,(KBS0714_MOLHKGIG_01305:0,SA211_MHAAABBN_01028:0,TT9_LFPAFLNI_01263:0)n2:0.0120208)n1:0.0145909)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001073_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001073_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..2d6b4ac2269c5549d10536c370d05062555a6296
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001073_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01486:0.199704,(AS2_ACLBLIBL_01590:0.0579063,(KBS0714_MOLHKGIG_01302:0,SA211_MHAAABBN_01025:0,TT9_LFPAFLNI_01260:0)n2:0.100574)n1:0.199704)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001101_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001101_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..d9aa6f292065a5a78007841563841ecd100f0d01
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001101_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01516:0.0774438,(AS2_ACLBLIBL_01621:0.037204,(KBS0714_MOLHKGIG_01266:0.0114792,(SA211_MHAAABBN_00985:0,TT9_LFPAFLNI_01224:0)n3:0.0114013)n2:0.0525468)n1:0.0774438)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001119_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001119_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..922859a4a88299adadb4618282005ca76a6112e1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001119_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01539:0.0734713,(AS2_ACLBLIBL_01642:0.0667525,(KBS0714_MOLHKGIG_01246:0,SA211_MHAAABBN_00965:0,TT9_LFPAFLNI_01204:0)n2:0.0341175)n1:0.0734713)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001124_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001124_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..e2d614cbe5dc33c5e256de100d7ea04e2a311bfc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001124_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01545:0.135584,(AS2_ACLBLIBL_01648:0.0663455,(SA211_MHAAABBN_00959:5e-09,(KBS0714_MOLHKGIG_01240:0.00333605,TT9_LFPAFLNI_01198:5e-09)n3:0.00333664)n2:0.112055)n1:0.135584)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001142_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001142_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..8fc8fd0f14d0619ff466c5345f0b1a3ddeaabfd7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001142_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01564:0.0625331,(AS2_ACLBLIBL_01667:0.0795906,(KBS0714_MOLHKGIG_01221:5e-09,(SA211_MHAAABBN_00940:0.007157,TT9_LFPAFLNI_01179:0.00355093)n3:0.00352934)n2:0.0382133)n1:0.0625331)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001152_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001152_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..c67c307b32df1d7c0b3eb73b15a17342a08bc386
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001152_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01575:0.388866,(AS2_ACLBLIBL_01677:0.113931,(SA211_MHAAABBN_00929:0.00730341,(KBS0714_MOLHKGIG_01210:0.0112172,TT9_LFPAFLNI_01167:5e-09)n3:0.009537)n2:0.0413059)n1:0.388866)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001178_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001178_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..311bb6684242b5a94a21830857893bc21fdfdcf9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001178_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01604:0.227791,(AS2_ACLBLIBL_01705:0.111028,(SA211_MHAAABBN_00902:0.0100559,(KBS0714_MOLHKGIG_01183:0.00774789,TT9_LFPAFLNI_01133:0.00388063)n3:0.00474472)n2:0.0713916)n1:0.227791)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001198_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001198_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..81da34d9acd46f2747c5618f6f303e5de986fde0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001198_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01626:0.0653352,(AS2_ACLBLIBL_01729:0.039658,(SA211_MHAAABBN_00880:0.00507256,(KBS0714_MOLHKGIG_01161:0.00221338,TT9_LFPAFLNI_01111:0.00444176)n3:0.00398276)n2:0.0624154)n1:0.0653352)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001226_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001226_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..0de5ed1108bcb29441f8df0f1cfdb740a37a55e6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001226_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01658:0.101975,(AS2_ACLBLIBL_01764:0.0251968,(KBS0714_MOLHKGIG_01128:0,SA211_MHAAABBN_00847:0,TT9_LFPAFLNI_01078:0)n2:0.0337957)n1:0.101975)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001235_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001235_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..a881f004808c4b76c90d002fb6902a6f811e0108
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001235_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01667:0.0635165,(AS2_ACLBLIBL_01774:0.0499413,(SA211_MHAAABBN_00838:0.00448605,(KBS0714_MOLHKGIG_01119:0.00154107,TT9_LFPAFLNI_01069:6e-09)n3:0.00170832)n2:0.0339209)n1:0.0635165)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001264_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001264_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..68d67270507c14d79074d69dac7726ccc35bc547
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001264_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01702:0.174763,(AS2_ACLBLIBL_01814:0.24357,(KBS0714_MOLHKGIG_01083:6e-09,(SA211_MHAAABBN_00802:0,TT9_LFPAFLNI_01032:0)n3:0.00472356)n2:0.0881071)n1:0.174763)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001287_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001287_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..bf830ad88e2b1695387f59dd676054aff665eff5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001287_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01736:0.114434,(AS2_ACLBLIBL_01846:0.0572663,(SA211_MHAAABBN_00752:0.00497148,(KBS0714_MOLHKGIG_01039:0.00486782,TT9_LFPAFLNI_00981:0.00726988)n3:0.00449386)n2:0.154597)n1:0.114434)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001323_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001323_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..1a0985cdaa6b71bd9bdfbf96c48efc6347fc763c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001323_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01850:2.5e-09,(SA211_MHAAABBN_00700:0.00421235,(AS2_ACLBLIBL_01903:0.0126901,(KBS0714_MOLHKGIG_00986:5e-09,TT9_LFPAFLNI_00929:0.00419988)n3:0.00845743)n2:5e-09)n1:2.5e-09)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001376_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001376_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..44f547e4e6c7d5c8a024c3812db741da7ba16cc9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001376_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01927:0.0787955,(AS2_ACLBLIBL_02029:5e-09,(KBS0714_MOLHKGIG_00913:0,SA211_MHAAABBN_00632:0,TT9_LFPAFLNI_00861:0)n2:0.0722421)n1:0.0787955)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001397_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001397_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..8be7c72e3c881cc830ebfe1ff22e0d83ab3bf50c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001397_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01951:0.0304042,(AS2_ACLBLIBL_02057:0.000520129,(KBS0714_MOLHKGIG_00878:0,SA211_MHAAABBN_00600:0,TT9_LFPAFLNI_00837:0)n2:0.0141161)n1:0.0304042)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001435_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001435_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..db43c79f9839994872288ec152e74f13d21d67a1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001435_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02002:0.0537756,(AS2_ACLBLIBL_02111:0.101474,(SA211_MHAAABBN_00551:0.00528864,(KBS0714_MOLHKGIG_00819:0.00245333,TT9_LFPAFLNI_00788:5e-09)n3:0.00208045)n2:0.236313)n1:0.0537756)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001455_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001455_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..8e3ea49e3fcbd7f742403ab79c995d356ca5275b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001455_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02025:0.475005,(AS2_ACLBLIBL_02132:0.176231,(KBS0714_MOLHKGIG_00799:0.0141233,(SA211_MHAAABBN_00530:0.00693276,TT9_LFPAFLNI_00766:0.010237)n3:0.0130613)n2:0.201528)n1:0.475005)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001461_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001461_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..a88183a7942f0a4017197b9fef76098844d88603
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001461_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02031:0.0647489,(AS2_ACLBLIBL_02138:0.0101915,((KBS0714_MOLHKGIG_00793:0,SA211_MHAAABBN_00524:0)n3:0.00514929,TT9_LFPAFLNI_00760:5e-09)n2:0.0103949)n1:0.0647489)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001477_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001477_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..703ee10be5e66b95ea94cf28c511dd05d47a48ff
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001477_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02049:0.0667082,(TT9_LFPAFLNI_00743:0.00275818,(AS2_ACLBLIBL_02154:0.0134453,(KBS0714_MOLHKGIG_00776:0.00256242,SA211_MHAAABBN_00507:5e-09)n3:0.00751165)n2:0.00469502)n1:0.0667082)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001480_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001480_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..9404314888933c9b95528d094c1c514d7103f9d8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001480_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02053:0.0988243,(AS2_ACLBLIBL_02158:0.0335439,(SA211_MHAAABBN_00503:0.00767533,(KBS0714_MOLHKGIG_00772:0.00753943,TT9_LFPAFLNI_00739:5e-09)n3:0.00744739)n2:0.0876814)n1:0.0988243)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001501_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001501_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..4a91adf1252ba0def0ff1ff974134379c54f238e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001501_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02083:0.00442549,(KBS0714_MOLHKGIG_00744:0.0134319,(TT9_LFPAFLNI_00709:0.00441704,(AS2_ACLBLIBL_02185:0.0463192,SA211_MHAAABBN_00475:6e-09)n3:0.00443383)n2:0.00446181)n1:0.00442549)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001511_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001511_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..ace941f81d9f3791191cffb4db1cd4776f059e50
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001511_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02095:0.161117,(AS2_ACLBLIBL_02219:0.0978702,(TT9_LFPAFLNI_00698:0.00883749,(KBS0714_MOLHKGIG_00734:0.00316794,SA211_MHAAABBN_00465:5e-09)n3:0.0106099)n2:0.106743)n1:0.161117)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001547_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001547_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..6d24ea3771cf9cbe1237bf1c065fe714d210f971
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001547_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02135:0.0563555,(AS2_ACLBLIBL_02266:0.0291637,((KBS0714_MOLHKGIG_00689:0,SA211_MHAAABBN_00426:0)n3:0.00222944,TT9_LFPAFLNI_00659:5e-09)n2:0.0320458)n1:0.0563555)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001551_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001551_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..0a1201f3c930d8ce6356d0df6505c2637d53774a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001551_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02139:0.0924522,(AS2_ACLBLIBL_02278:0.155944,(TT9_LFPAFLNI_00655:0.0143501,(KBS0714_MOLHKGIG_00685:5e-09,SA211_MHAAABBN_00422:0.00348963)n3:0.00322858)n2:0.114694)n1:0.0924522)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001561_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001561_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..ebc13c15d0e34865027ccb9bf43c4dd31181459e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001561_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02150:0.0331509,(AS2_ACLBLIBL_02288:0.158969,(TT9_LFPAFLNI_00644:5e-09,(KBS0714_MOLHKGIG_00674:0.00330098,SA211_MHAAABBN_00411:0.00331037)n3:0.00165156)n2:0.0610629)n1:0.0331509)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001605_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001605_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..f0f2c7652bfe5e54dd8706ce20f2bf6038aa3809
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001605_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02272:0.0769114,(AS2_ACLBLIBL_02389:0.0328124,(TT9_LFPAFLNI_00559:0.00825134,(KBS0714_MOLHKGIG_00556:0.0110012,SA211_MHAAABBN_00281:5e-09)n3:0.00641328)n2:0.0363101)n1:0.0769114)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001626_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001626_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..21aafff4b47d1813cfa6dfbfff4b04bf8e50a076
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001626_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02304:0.214834,(AS2_ACLBLIBL_02422:0.133452,(KBS0714_MOLHKGIG_00530:0.0399068,(SA211_MHAAABBN_00251:0.0232747,TT9_LFPAFLNI_00530:0.0175062)n3:0.00650606)n2:0.0584415)n1:0.214834)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001630_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001630_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..04ff6712d3080f767088fd9dc7711c8e5d29c50e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001630_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02310:0.00589746,(AS2_ACLBLIBL_02427:0.0387717,(SA211_MHAAABBN_00244:0.0148611,(KBS0714_MOLHKGIG_00522:0.0104055,TT9_LFPAFLNI_00522:0.0125755)n3:0.00837414)n2:0.00672034)n1:0.00589746)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001632_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001632_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..a624492e1a9611d278031a9be8e7509543256d20
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001632_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02317:0.0200071,(KBS0714_MOLHKGIG_00516:0.0673189,(TT9_LFPAFLNI_00515:0.0276126,(AS2_ACLBLIBL_02435:0.0584173,SA211_MHAAABBN_00236:0.0424117)n3:0.00575183)n2:0.0163413)n1:0.0200071)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001652_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001652_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..5ac302607621ae9b5654f20b3b7afad78fdf78c4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001652_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02345:0.154448,(AS2_ACLBLIBL_02462:0.116818,(TT9_LFPAFLNI_00485:6e-09,(SA211_MHAAABBN_00204:0.00632559,KBS0714_MOLHKGIG_00485:0.0063203)n3:0.00157969)n2:0.0861797)n1:0.154448)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001667_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001667_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..57d7273d5e46dcfeca4871dbbf32177ab90d4a2b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001667_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02362:0.208476,(AS2_ACLBLIBL_02478:0.191295,(KBS0714_MOLHKGIG_00469:0.0141697,(SA211_MHAAABBN_00187:0,TT9_LFPAFLNI_00469:0)n3:0.0245555)n2:0.106562)n1:0.208476)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001669_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001669_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..77776db84a3d449c0b94e9897432344e6132522f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001669_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02364:0.171715,(AS2_ACLBLIBL_02480:0.179676,((KBS0714_MOLHKGIG_00467:0,TT9_LFPAFLNI_00467:0)n3:0.0149522,SA211_MHAAABBN_00185:5e-09)n2:0.164687)n1:0.171715)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001673_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001673_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..f7b46215dc2abb1c31b27966d8da552120a5a76d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001673_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02369:0.363812,(AS2_ACLBLIBL_02485:0.124688,((KBS0714_MOLHKGIG_00462:0,SA211_MHAAABBN_00180:0)n3:5e-09,TT9_LFPAFLNI_00462:0.0132008)n2:0.0921965)n1:0.363812)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001676_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001676_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..dbbae1219b25f6104ee64582ee393e9e0899603d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001676_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02372:0.0992653,(AS2_ACLBLIBL_02488:0.0727241,(SA211_MHAAABBN_00177:0.00604814,(KBS0714_MOLHKGIG_00459:0.00435615,TT9_LFPAFLNI_00459:5e-09)n3:0.000515945)n2:0.0804881)n1:0.0992653)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001677_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001677_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..41d479283c77dfb4e7abc2694624fa034c68cadf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001677_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02373:0.270413,(AS2_ACLBLIBL_02489:0.11606,(TT9_LFPAFLNI_00458:0.00674939,(KBS0714_MOLHKGIG_00458:0.00998323,SA211_MHAAABBN_00176:0.00471881)n3:0.0108103)n2:0.0938371)n1:0.270413)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001695_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001695_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..9a3d60d0e809cb0c209225373a3aeb66616a7b89
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001695_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02393:0.107739,(AS2_ACLBLIBL_02522:0.0519261,(KBS0714_MOLHKGIG_00435:0,SA211_MHAAABBN_00156:0,TT9_LFPAFLNI_00438:0)n2:0.0462071)n1:0.107739)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001710_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001710_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..c0e22108532820134528f57b6b265ba4245b0eb3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001710_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02409:0.00282125,((KBS0714_MOLHKGIG_00419:0,TT9_LFPAFLNI_00422:0)n2:0.0103105,(AS2_ACLBLIBL_02540:0.0806126,SA211_MHAAABBN_00140:0.0105159)n3:0.00172129)n1:0.00282125)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001736_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001736_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..9dd9682e2d69fb5d53762c889b845b74b1476c48
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001736_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02446:0.00467653,(AS2_ACLBLIBL_02574:0.0612034,(SA211_MHAAABBN_00105:0.00935175,(KBS0714_MOLHKGIG_00381:0.00931974,TT9_LFPAFLNI_00387:5e-09)n3:5e-09)n2:0.00932159)n1:0.00467653)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001757_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001757_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..a328586163d5bf0d25693bb8195e891135333834
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001757_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02474:0.242081,(AS2_ACLBLIBL_02622:0.127403,(KBS0714_MOLHKGIG_00347:0.0294318,(SA211_MHAAABBN_00063:5e-09,TT9_LFPAFLNI_00354:0.00333867)n3:0.044092)n2:0.0839706)n1:0.242081)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001761_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001761_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..48abe8935781a5e9634cede3fa78ad7f89d3eb75
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001761_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02479:0.153362,(AS2_ACLBLIBL_02627:0.0815032,(TT9_LFPAFLNI_00349:0.00886836,(KBS0714_MOLHKGIG_00342:0.0174236,SA211_MHAAABBN_00058:0.00569138)n3:0.00582207)n2:0.110348)n1:0.153362)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001771_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001771_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..be99f4c29c8bf3326844073001404ed865ce1d61
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001771_tree.txt
@@ -0,0 +1 @@
+(AS2_ACLBLIBL_00007:0.0515659,((KBS0714_MOLHKGIG_00328:0,SA211_MHAAABBN_00044:0)n2:0.00530806,TT9_LFPAFLNI_00335:0.0102035)n1:0.0515659)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001813_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001813_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..808bcbca5af645381652cdf87af55e8874febea6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001813_tree.txt
@@ -0,0 +1 @@
+(AS2_ACLBLIBL_00550:0.0272,(SA211_MHAAABBN_01905:5e-09,(KBS0714_MOLHKGIG_02192:0.0176703,TT9_LFPAFLNI_02136:0.0361472)n2:0.0180269)n1:0.0272)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001817_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001817_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..7df618a00be582153146ccb2fdd9607c720104a1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001817_tree.txt
@@ -0,0 +1 @@
+(AS2_ACLBLIBL_00580:0.236952,(KBS0714_MOLHKGIG_02172:5e-09,(TT9_LFPAFLNI_02117:0.0283588,SA211_MHAAABBN_01886:6e-09)n2:0.00349361)n1:0.236952)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001822_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001822_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..2a9c8a17ca129837dc4512dcc62b6b779aff763c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001822_tree.txt
@@ -0,0 +1 @@
+(AS2_ACLBLIBL_00637:0.00751942,(KBS0714_MOLHKGIG_02135:0.00894925,(SA211_MHAAABBN_01843:0,TT9_LFPAFLNI_02073:0)n2:0.0119897)n1:0.00751942)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001845_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001845_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..06814ffcbc2fcd70adad18c98cea0f54982a8d65
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001845_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00786:0.0206122,(AS2_ACLBLIBL_00849:0.0832522,(SA211_MHAAABBN_01702:0,TT9_LFPAFLNI_01930:0)n2:0.057559)n1:0.0206122)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001854_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001854_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..f8c95d7be755d0731f28c8e61aa450a3a18152af
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001854_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00840:0.115401,(AS2_ACLBLIBL_00901:0.0118977,(SA211_MHAAABBN_01647:0.100856,TT9_LFPAFLNI_01878:0.0506441)n2:5e-09)n1:0.115401)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001870_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001870_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..0c6c8116ccd41627432a2f6f85a4cc8509008bdc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001870_tree.txt
@@ -0,0 +1 @@
+(AS2_ACLBLIBL_01032:0.129557,(KBS0714_MOLHKGIG_01836:0.0153505,(SA211_MHAAABBN_01533:0,TT9_LFPAFLNI_01757:0)n2:0.0147091)n1:0.129557)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001883_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001883_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..e33a64170f60deeddba9fe5edeb34f6919064ceb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001883_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01473:0.123193,(KBS0714_MOLHKGIG_01315:5e-09,(AS2_ACLBLIBL_02666:1.3704,AS2_ACLBLIBL_01577:0.00555069)n2:0.000616743)n1:0.185531)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001899_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001899_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..38a93a6414883e486d68d2201a6270bc7f379f3e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001899_tree.txt
@@ -0,0 +1 @@
+(AS2_ACLBLIBL_02296:0.0604663,((KBS0714_MOLHKGIG_00666:0,SA211_MHAAABBN_00403:0)n2:0.00558345,TT9_LFPAFLNI_00636:6e-09)n1:0.0604663)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001910_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001910_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..da00b7776adce6ff833616ae25eb2e8cf1699bde
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001910_tree.txt
@@ -0,0 +1 @@
+(AS2_ACLBLIBL_02394:0.730639,(KBS0714_MOLHKGIG_00369:0.0302071,(SA211_MHAAABBN_00085:0,TT9_LFPAFLNI_00376:0)n2:0.0182424)n1:0.730639)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001928_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001928_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..2972f640765a05bbf2da6204dd9ca75f3b903e40
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001928_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02368:0.223474,(KBS0714_MOLHKGIG_00463:5e-09,(SA211_MHAAABBN_00181:0.00607243,TT9_LFPAFLNI_00463:0.00301063)n2:0.00303531)n1:0.223474)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001930_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001930_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..6a06fba3da694ad065a0ffa1ef0011da1585c58d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001930_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02324:0.322936,(TT9_LFPAFLNI_00509:0.0268565,(KBS0714_MOLHKGIG_00510:0.0192889,SA211_MHAAABBN_00230:0.0248159)n2:0.0173435)n1:0.322936)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001932_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001932_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..1b4f1966ebe650c66dfb0941a798719c2a6fa882
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001932_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_02186:0.0107889,(KBS0714_MOLHKGIG_00639:0.0180496,(SA211_MHAAABBN_00376:0.0071396,TT9_LFPAFLNI_00608:0.00356013)n2:0.00349096)n1:0.0107889)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001951_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001951_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..27a2c1df93651d1c450d372b1f3635c2c75b61bf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001951_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_01396:0.308018,(TT9_LFPAFLNI_01360:0.137591,(SA211_MHAAABBN_01140:0.00227414,KBS0714_MOLHKGIG_01410:0.018195)n2:0.00763499)n1:0.308018)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001963_tree.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001963_tree.txt
new file mode 100644
index 0000000000000000000000000000000000000000..44b0c42bab6b921fd45442ee66a8c62d89070c2a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/Resolved_Gene_Trees/OG0001963_tree.txt
@@ -0,0 +1 @@
+(KD337_NAFOICDF_00903:0.184635,((KBS0714_MOLHKGIG_01893:0,SA211_MHAAABBN_01589:0)n2:6e-09,TT9_LFPAFLNI_01813:0.0448194)n1:0.184635)n0;
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000007.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000007.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1c0902fa04324e6ded3349d8b3dff18faa60a982
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000007.fa
@@ -0,0 +1,100 @@
+>0_1189
+MACRLVGLSRSAYRRPLKGDTVADPDRALRQWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
+>1_149
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
+>1_993
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
+>1_1244
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
+>1_1336
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAVADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETGDSQNVRTE
+>1_2016
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
+>3_972
+MVNHKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIK
+ICSIVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWA
+GTRTGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRH
+SSLGYLTPAEYARQCTHQMETDDSQNVRTE
+>3_1065
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
+>3_1073
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAVADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
+>3_1075
+MSERIACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEG
+WVVNHKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPI
+KICSIVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADW
+AGTRTGLSYIPPGSPWRNGYVESFNSRIRDECLNINRFYSLLHAQVIIGDWKDEYNHHRR
+HSSLGYLTPAEYARQCTHQMETDDSQNVRTE
+>3_1971
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAVADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMEIGDSQNVRTE
+>4_563
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVASRGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
+>4_565
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAVVDWAGTR
+TGLWADPVS
+>4_1201
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
+>4_1290
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTH
+>4_1826
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVAARGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLGHV
+>4_2145
+MACRLVGLSRSAYRRPLKGDTVADPDRALREWLRAWAKDHPRYGYRRAYHDARAEGWVVN
+HKKIQRLWRDEGLRVPQRRRRKRVGSSTVDAPTADAPNVVWAVDFQFDADEHGRPIKICS
+IVDEHTRECIGGLVERSITADRLTAHLEDLVASRGAPAVLRSDNGPEFISEAMADWAGTR
+TGLSYIPPGSPWRNGYVESFNSRIRDECLNINSFYSLLHAQVIIGDWKDEYNHHRRHSSL
+GYLTPAEYARQCTHQMETDDSQNVRTE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000008.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000008.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5553d2efb40870e88c6e302ad0eea6c7713591c1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000008.fa
@@ -0,0 +1,83 @@
+>1_685
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>1_1350
+MEGSLEGSHGDRVRLEDGRGHRGGLHHYPGLNSFTTWDPGASSIPAPTQQSLRTLEWLSR
+RENLVVCGPSGTGKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARI
+LRADLIVIDDIGLLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATAT
+VDRLLHHAHVCQTTGDSVRMTQAMAGKGVMPLN
+>1_1449
+MAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIGLLPVADDAAEGLYRIVDAA
+YEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQTTGDSVRMTQAMAGKGVMP
+LN
+>1_2164
+MLWKVRSKAPTVTASVSKMVVATGEGYTTIRDSTPKTLATATVDRLLHHAHVCQTTGDSV
+RMTQAMAGKGVMPLN
+>1_2166
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTVKSLEVV
+>3_80
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>3_327
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>3_974
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>3_1350
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>3_2226
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>4_581
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>4_971
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPIADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>4_1111
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPIADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>4_1300
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
+>4_2104
+MSIHTPNTAAPALPADLEALLRQLKMPHARGIAAEVLATARAQRWEPAEVLKALLVEETT
+GRARSMLAARRKAAGFPTGKTFTTWDPGASSIPAPTQQSLRTLEWLSRRENLVVCGPSGT
+GKTFFLEALGQQAVEEGKRVAWFTLEDLGAMIRAHRPDDTITKAVARILRADLIVIDDIG
+LLPVADDAAEGLYRIVDAAYEKRSVAISSNLHPAGFDELMPKTLATATVDRLLHHAHVCQ
+TTGDSVRMTQAMAGKGVMPLN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000012.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000012.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cbcaac713ffb109e51bf49d73c68f2a9848c865a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000012.fa
@@ -0,0 +1,42 @@
+>0_702
+MLDIRDRGQAPCRHVTDLLDTRLDVIDRQLAELAQLRTTIADLREDAAAGDPATCSPEDV
+CRYL
+>0_704
+MRIGEVARASGTTSKTLRYYEEVGLLPAADRTPAGYRDYGAEVLDRLDFIRRGSSPMKWC
+SG
+>1_148
+MKGAAQLDFIRRGQAVGLTLAQIGQVLDIRDRGQAPCRHVTDLLDTRLDVIDRQLAELAQ
+LRTTIADLREDAAAGDPATCSPEDVCRYL
+>1_151
+MRIGEVARASGTTSKTLRYYEEVGLLPAADRTPAGYRDYGAEVLGPAVG
+>1_1030
+MRIGEVARASGTTSKTLRYYEEVGLLPAADRTPAGYRDYGAEVLDRLDFIRRGQAVGLTL
+AQIGQVLDIRDRGQAPCRHVTDLLDTRLDVIDRQLAELAQLRTTIADLREDAAAGDPATC
+SPEDVCRYL
+>1_2002
+MRIGEVAAASGVTTKALRFYEERGLLPQADRATNGYRDYPEDTIVRLEFIRRSQVAGLTL
+AEILDILQIRDAGTAPCGHVRDQLAEHLTNLDRHIAELTALRETVAGLHGTAAAGDPAQC
+NAEVICSYL
+>2_2171
+MRIGEVAAASGVTTKALRFYEERGLLPQADRATNGYRDYPEDTIVRLEFIRRSQVAGLTL
+AEILDILQIRDAGTAPCGHVRDQLAEHLTNLDRHIAELTALRETVAGLHGTAAAGDPAQC
+NAEVICSYL
+>3_282
+MRIGELAERAGTTAKTLRFYEEQGLLPPAERTPSGYRDYAPETAARIDFVHRGQAAGLTL
+AQIRQILDIRDDGAAPCEHVRDLLDARLAEIEQQIAQLAALRDTITELRRDAAQPDPDSC
+SADQVCRYL
+>3_322
+MRIGEVARASGTTSKTLRYYEEVGLLPAADRTPAGYRDYGAEVLDRLDFIRRGQAAGLTL
+AQIGQVLDIRDRGQAPCRHVTDLLDTRLDVIDRQLAELAQLRTTIADLREDAAAGDPAMC
+SPEDVCRYL
+>3_329
+MRIGEVARASGTTSKTLRYYEEVGLLPAADRTPAGYRDYGAEVLDRLDFIRRGQAAGLTL
+AQIGQVLDIRDRGQAPCRHVTDLLDTRLDVIDRQLAELAQLRTTIADLREDAAAGDPAMC
+SPEDVCRYL
+>3_758
+MRIGEVARASGTTSKTLRYYEEVGLLPAADRTPAGYRDYGAEVLDRLDFIRRGQAAGLTL
+AQIGQVLDIRDRGQAPCRHVTDLLDTRLDVIDRQLAELAQLRTTIADLREDAAAGDPAMC
+SPEDVCRYL
+>4_979
+MLDIRDRGQAPCRHVTDLLDTRLDVIDRQLAELAQLRTTIADLREDAAAGDPATCSPEDV
+CRYL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000017.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000017.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ad52e876e20980b6182c1b9ae566e17cab30a6c3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000017.fa
@@ -0,0 +1,57 @@
+>0_1211
+MRVHRRTVPVEHRSVVHGLTVTSPERTWADLCAVRPRWDEADLVAAGDHLVRHPWAGGGR
+LPPRTTVERLAEVLEALAPFHGVGRARAALGRVRVGADSAMETHARLALIDAGLGEPLLQ
+HKVAPDDPALAESDLYFADLRVALEYDGEHHLGRQQQARDARRDRRLLSYGVTPMRITAA
+DHAEGYRSVIAQLQQRRRAHDSPSEETARGES
+>1_1505
+MPRVVTPLPPDQPAVLLATDLARLGLPPDRARRSDLERVGQGFHRQRARPGTGWADLGLP
+EPGHGFSPDHLAALLRRRPDAVLSHETAAHLHALPMPTRAWRRRDPATGELEADPPVHLT
+VARGTRRVRRAGLMDHRRPLAPEFVTLVHGLRVTTVDRTWLDLCSLTPPWTFEDLVAAGD
+HAVRHPWTPAGRTDPATTIAALRSALHASGRFHGRPAAREALDSVRVGADSPPETRLRLA
+LVAGGLPEPELQAALEPGDPVSPVADLAYRHVRLALQYDGAGHRTREQQARDARRDRYGQ
+ARGWTTLRVTWADGREDFRGVVAVVRRRLGPSAST
+>1_1604
+MPFAPDLPLVPVFTTRDVLERGLPPSRVRRSDVLRLARGIHRRRDMPLRTWESAGLPPPH
+HGVGLDLLTALLRSRPDAVLSHETAAHLHGLPLPPGGATRRAAVEITLHRGTARARIPGV
+MEHRRPLPAGHVTSVLGLRVTTPERTWLDLCSIGHPWDEASLVSAGDHLVRHPWSPRGRR
+PPITTVTALHEAMRPLGRFVGRPRATAALERVRVGADSPQETRLRLALVEAGLGEPALQH
+VFDPGRRDAPEADLWFEDCRLVLQYDGEVHRSAEQHARDARRDQYYAERGQMTLHVTGRD
+VGEGYARVIEAVLRRRAQVSNGWDA
+>1_1786
+MPRRPAPLPPALAGRVFTRREALDRLSLSSDRLRSLDLRQVTHGAHRAVVDVPGSWAALG
+YPRPVAALPPEEAAVVVALTRGVASHLTAARLHGLVLPWWAEEDMRVHVSRPHRTGRTGR
+AGVACHGRTVPAEDRVEVHGVPVTSLERTWVDLCSLLRPDQVADAVVAGDALVNRPWVDG
+SRLPPRTTASRLSAALERAGRFKGVRVARAALALIRVGADSPPETRLRLALLDAGLPEPR
+LQAQLVSPAGERTDADMVVERSRVALHYDGGHHRTPEQQRRDARRDRLWQEAGHLSITVM
+GADLAEDFRTVVAAVVRHDRAARATSTISAPAPAAGLSNVKSGEWALSNVG
+>2_1123
+MLERVRVGADSAVVSLARLALVDAGLGEPLLQHRLDPWDPDCPETHMFSPELAVALEYDG
+GGHLTPAQQARDARRDRRLPARGVTPLRNTAEDHAEGYRRLIAQLQDRRRGR
+>3_1225
+MPRVVTPLPPDQPAVLLATDLARLGLPPDRARRSDLERVGQGFHRQRAHPGTGWADLGLP
+EPGHGFSPDHLAALLRRRPDAVLSHETAAHLHGLPMPARAWRRRDPATGELDVDPPVHLT
+VARGTRRVRRAGLMDHRRPLAPEFVTHVHGLRVTTVDRTWLDLCSLTPPWTFEDLVAAGD
+HAVRHPWTPAGRTDPATTIAALRSALHASGRFHGRPAAREALDSVRVGADSPPETRLRLA
+LVAGGLPEPGLQAALEPEDPFSPVADVAYRHVRLALQYDGAGHRTREQQARDARRDRYGQ
+ARGWTTLRVTWADGREDFRGVVAVVRRRLGHSAST
+>3_1319
+MSFAPDLPLVPVFTTRDVLERGLPPSRVRRSDVLRLARGIHRRRDMPLRTWESAGLPPPH
+HGVGLDLLTALLRSRPDAVLSHETAAHLHGLPLPPGGATRRAAVEITLHRGTARARIPGV
+MEHRRPLPAGHVTSVLGLRVTTPERTWLDLCSIGHPWDEASLVSAGDHLVRHPWSPRGRR
+PPITTVTALHEAMRPLGRFVGRPRATAALERVRVGADSPQETRLRLALVEAGLGEPTLQH
+VFDPGRRDAPEADLWFEDCRLVLQYDGEVHRSAEQHARDARRDQYYAERGQMTLHVTSRD
+VGEGYARVIEAVLRRRAQVSNGWDA
+>4_1432
+MPRVVTPLPPDQPAVLLATDLARLGLPPDRARRSDLERVGQGFHRQRAHPGTGWADLGLP
+EPGHGFSPDHLAALLRRRPDAVLSHETAAHLHGLPMPARAWRRRDPATGELDVDPPVHLT
+VARGTRRVRRAGLMDHRRPLAPEFVTHVHGLRITTVDRTWLDLCSLTPPWTFEDLVAAGD
+HAVRHPWTPAGRTDPATTIAALRWALHASGRFHGRPAAREALDSVRVGADSPPETRLRLA
+LVAGGLPEPELQAALEPGDPFSPVADLAYRHVRLALQYDGAGHRTREQQARDARRDRYGQ
+ARGWTTLRVTWADGREDFRGVVAVVRRRLSPSAST
+>4_1534
+MSFAPDLPLVPVFTTRDVLERGLPPSRVRRSDVLRLARGIHRRRDMPLRTWESAELPPPH
+HGVGLDLLTALLRSRPDAVLSHETAAHLHGLPLPPGGATRRAAVEITLHRGTARARIPGV
+MEHRRPLPAGHVTSVLGLRVTTPERTWLDLCSIGHPWDEASLVSAGDHLVRHPWSPRGRR
+PPITTVTALHEAMRPLGRFVGRPRATAALERVRVGADSPQETRLRLALVEAGLGEPTLQH
+VFDPGRRDAPEADLWFEDCRLVLQYDGEVHRSAEQHARDARRDQYYAERGQMTLHVTSRD
+VGEGYARVIEAVLRRRAQVSNGWDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000020.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000020.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d422dc33049a23c2f86ff68029a503dd976dbc82
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000020.fa
@@ -0,0 +1,109 @@
+>0_389
+MSTPHHHDHPTDQTAEHPDPNPHAGHANHTDHAAHHPADAATHGQAMPQGHAHSALDEDH
+QVHDHGQHAGHSTAMFKNRFWVSLVLSIPVVFFSHMVGQLLGYHVPEFPGSAWIAPVLGT
+VIYLYGGMPFLKGGLTELRARQPGMMLLIAMAITVAFVASWVTTLGIGDLMLDFWWELAL
+LVVIMLLGHWMEMRALGAASSALDALAALLPEEAEKVVDGDTITVPITELAVGDVVLVRA
+GARVPADGTILEGAAEFDEAMITGESKPVLRQAGDTVVAGTVATDNTVRVKVAAVGTDTT
+LAGIQRMVADAQASSSRAQALADRAAALLFWFALVAAIITAIVWTVMGQPTDAVTRTVTV
+LVIACPHALGLAIPLVIALSTEKAAKSGVLIKDRMALERMRTIDVVLFDKTGTLTEGAHV
+VTAVTAMPGVSEAELLAVAAAAEADSEHPVARAIVTAAGQHPQASTLRKRGTDFSAAMGR
+GVRATVDGSEILVGGPNMLRELNLTVPAEITEHTASWTARGAGVLHVLREGSVIGAVALE
+DKVRPESRAAVAALHARGIKVAMITGDARQVAEAVGADLGIDEVFAEVLPQDKDTKVTEL
+QSRGLSVAMVGDGVNDAPALARAEVGIAIGAGTDVAMESAGVVLASNDPRAVLSMIELSQ
+ASYTKMIQNLVWATGYNVLAVPLAAGVLAPIGFVLSPAVGAILMSASTIVVALNAQLLRR
+INLDPGHLAPLGAPRPEAALQPATS
+>1_608
+MSTPHHHDHPTDQTAEHPDPNPPAGHANHTDHAAHHPADAAAHGQAMPQGHAHSALDEDH
+QVHDHGQHAGHSTAMFKNRFWVSLVLSIPVVFFSHMVGQLLGYHVPEFPGSAWIAPVLGT
+VIYLYGGMPFLKGGLTELRARQPGMMLLIAMAITVAFVASWVTTLGIGDLMLDFWWELAL
+LVVIMLLGHWMEMRALGAASSALDALAALLPEEAEKVVDGDTITVPITELAVGDVVLVRA
+GARVPADGTILEGAAEFDEAMITGESKPVLRQAGDTVVAGTVATDNTVRVKVAAVGTDTT
+LAGIQRMVADAQESSSRAQALADRAAALLFWFALVAAIITAIVWTAIGQPTDAVTRTVTV
+LVIACPHALGLAIPLVIALSTEKAAKSGVLIKDRMALERMRTIDVVLFDKTGTLTEGAHV
+VTAVTAMPGVSEAELLAVAAAAEADSEHPVARAIVTAAGQHPQASTLRKRGTDFSAAMGR
+GVRATVDGSEILVGGPNMLRELNLTMPAEITEHTASWTARGAGVLHVLREGSVIGAVAVE
+DKVRPESRAAVAALHARGIKVAMITGDARQVAEAVGADLGIDEVFAEVLPQDKDTKVTEL
+QSRGLSVAMVGDGVNDAPALARAEVGIAIGAGTDVAMESAGVVLASNDPRAVLSMIELSQ
+ASYTKMIQNLVWATGYNVLAVPLAAGVLAPIGFVLSPAVGAILMSVSTIVVALNAQLLRR
+IDLDPEHLAPLERPRSQAALQPAAVS
+>1_1241
+MTDPTTHHHDHAGVATTESGHRDDSRAENEDHTMEHGDHAGHGHHGGGHAGHGDHVGQFR
+RLFWINLIIAIPVVAFSPMFAMLLGYSVPSWAGWVAAVLGSVMYAWGGTPFLTGAVSELK
+SRQPGMMLLIALGITVAFLASWAATVGLVHPELEFWWELALLIVIMLLGHWIEMRSLAQT
+TSALDSLAALLPDEAERIEGDDVVKVDPAELRVGDVVIVRPGGSVPADGTIVDGRADMDE
+SMITGESHPVARGEGENVTAGTVATDSGLRVEITATGDDTALAGINRLVAEAQGSSSRAQ
+RIADRAAALLFWFALGAALITAVVWTLFGLPDDAVVRTITVLVIACPHALGLAIPLVVSI
+ATERAARGGVLIKDRLALESMRQVDAVLFDKTGTLTKGEPTVTGVEPTGGLNAEQLLALA
+ASAEADSEHPLARSIVTAAKEKGLAVEPASGFTSSPAVGVTATVADHEIRVGGPRLLEET
+GQDEIGVADEWRAEGAIILHVLRDGKVIGGLKLADEVRPESRDAVDALHQLGVEVVMITG
+DAEAVANEVGRELGIDRVFAGVRPEDKSAKVDQLQKEGKKVAMVGDGVNDAPALAQADVG
+IAIGAGTDVAIASAGVILASSDPRSVLSVIQLSRAAYRKMRQNLWWAAGYNLLSVPLAAG
+VLAPVGFVMPMSVGAILMSISTVVVALNAQLLRRIDLAPAASTRSVLEHQK
+>2_693
+MTDPNSQQHHGHETDTPAHGEHHHGSVSAHASADAHGTREGQHTGHQGHAMDHGQHSGHT
+GLDEHGGHDEHAQHGGYGDHSGHGGHGDHVGQFRRLFWINLVIAIPAVALSPMFAMLLGY
+EVPGWAGWVAAALGTVMYVWGGRPFLTGAVSELKSRKPGMMLLIALAITVAFFASWAATL
+GLVHHELEFWWELALLIVIMLLGHWIEMRSLAQTTSALDSLAALLPDEAERVEGENVVKV
+APADLDVGDVVLVRPGGSVPADGTIVDGRAEMDESMITGESRPVSRGEGQTVTAGTVATD
+SGLRVEITATGDDTALAGINRLVAEAQNSSSRAQRIADKAAAWLFWFALGAALVTAVVWT
+LIGMPDEAVVRTITVLVIACPHALGLAIPLVVSIATERAARGGVLVKDRLALESMRQVDA
+VLFDKTGTLTKGEPTVTGVEPTGELDADQVLALAASAEADSEHPLAKAIVTAAKDKGFAL
+QQASGFSSSPAVGVTATVSGQEVRVGGPRLLEETGQHEVGTAEAWRSEGAIILHVLRGGQ
+VVGGLRLADEVRPESRYAVDALHALGVEVVMITGDAEAVANEVGKELGIDRVFAGVRPED
+KSAKVSQLQEEGKRVAMVGDGVNDAPALAQADVGIAIGAGTDVAIASAGVILASSDPRSV
+LSIIQLSRRAYGKMKQNLWWAAGYNLLSVPLAAGILAPVGLVLPMSIGAILMSASTVVVA
+LNAQLLRRIDLTPEASTRSVLERQK
+>2_2144
+MSTPHHHDHPTDQTAEHPDPNPHAGHANHTDHAAHHPADAATHGQAMPQGHAHSALDEDH
+QVHDHGQHAGHSTAMFKNRFWVSLVLSIPVVFFSHMVGQLLGYHVPEFPGSAWIAPVLGT
+VIYLYGGMPFLKGGLTELRARQPGMMLLIAMAITVAFVASWVTTLGIGDLMLDFWWELAL
+LVVIMLLGHWMEMRALGAASSALDALAALLPEEAEKVVDGDTITVPITELAVGDVVLVRA
+GARVPADGTILEGTAEFDEAMITGESKPVLRQAGDTVVAGTVATDNTVRVKVAAVGTDTT
+LAGIQRMVADAQESSSRAQALADRAAALLFWFALVAAIITAIVWTAIGQPTDAVTRTVTV
+LVIACPHALGLAIPLVIALSTEKAAKSGVLIKDRMALERMRTIDVVLFDKTGTLTEGAHV
+VTAVTAMPGVSEAELLAVAAAAEADSEHPVARAIVTAAGQHPQASTLRKRGTDFSAAMGR
+GVRATVDGSEILVGGPNMLRELNLTMPAEITEHTASWTARGAGVLHVLREGSVIGAVAVE
+DKVRPESRAAVAALHARGIKVAMITGDARQVAEAVGADLGIDEVFAEVLPQDKDTKVTEL
+QSRGLSVAMVGDGVNDAPALARAEVGIAIGAGTDVAMESAGVVLASNDPRAVLSMIELSQ
+ASYTKMIQNLVWATGYNVLAVPLAAGVLAPIGFVLSPAVGAILMSASTIVVALNAQLLRR
+INLDPGHLAPLGAPRPEAALQPATS
+>3_969
+MTDPTTHHHDHAGVATTESGHRDDSRAENEDHTMEHGDHAGHGHHGGGHAGHGDHVGQFR
+RLFWINLIIAIPVVAFSPMFAMLLGYSVPSWAGWVAAVLGSVMYAWGGTPFLTGAVSELK
+SRQPGMMLLIALGITVAFLASWAATVGLVHPELEFWWELALLIVIMLLGHWIEMRSLAQT
+TSALDSLAALLPDEAERIEGDDVVKVDPAELRVGDVVIVRPGGSVPADGTIVDGRADMDE
+SMITGESHPVARGEGENVTAGTVATDSGLRVEITATGDDTALAGINRLVAEAQGSSSRAQ
+RIADRAAALLFWFALGAALITAVVWTLFGLPDDAVVRTITVLVIACPHALGLAIPLVVSI
+ATERAARGGVLIKDRLALESMRQVDAVLFDKTGTLTKGEPTVTGVEPTGGLNAEQLLALA
+ASAEADSEHPLARSIVTAAKEKGLAVEPASGFTSSPAVGVTATVADHEIRVGGPRLLEET
+GQDEIGVADEWRAEGAIILHVLRDGKVIGGLKLADEVRPESRDAVDALHQLGVEVVMITG
+DAEAVANEVGRELGIDRVFAGVRPEDKSAKVDQLQKEGKKVAMVGDGVNDAPALAQADVG
+IAIGAGTDVAIASAGVILASSDPRSVLSVIQLSRAAYRKMRQNLWWAAGYNLLSVPLAAG
+VLAPVGFVMPMSVGAILMSISTVVVALNAQLLRRIDLAPAASTRSVLEHQK
+>4_573
+MSTPHHHDHPTDQTAEHPDPNPHAGHANHTDHAAHHPADAATHGQAMPQGHAHSALDEDH
+QVHDHGQHAGHSTAMFKNRFWVSLVLSIPVVFFSHMVGQLLGYHVPEFPGSAWIAPVLGT
+VIYLYGGMPFLKGGLTELRARQPGMMLLIAMAITVAFVASWVTTLGIGDLMLDFWWELAL
+LVVIMLLGHWMEMRALGAASSALDALAALLPEEAEKVVDGDTITVPITELAVGDVVLVRA
+GARVPADGTILEGAAEFDEAMITGESKPVLRQAGDTVVAGTVATDNTVRVKVAAVGTDTT
+LAGIQRMVADAQESSSRAQALADRAAALLFWFALVAAIITAIVWTAIGQPTDAVTRTVTV
+LVIACPHALGLAIPLVIALSTEKAAKSGVLIKDRMALERMRTIDVVLFDKTGTLTEGAHV
+VTAVTAMPGVSEAELLAVAAAAEADSEHPVARAIVTAAGQHPQASTLRKRGTDFSAAMGR
+GVRATVDGSEILVGGPNMLRELNLTMPAEITEHTASWTARGAGVLHVLREGSVIGAVAVE
+DKVRPESRAAVAALHARGIKVAMITGDARQVAEAVGADLGIDEVFAEVLPQDKDTKVTEL
+QSRGLSVAMVGDGVNDAPALARAEVGIAIGAGTDVAMESAGVVLASNDPRAVLSMIELSQ
+ASYTKMIQNLVWATGYNVLAVPLAAGVLAPIGFVLSPAVGAILMSVSTIVVALNAQLLRR
+IDLDPEHLAPLERPRSQAALQPAAVS
+>4_1198
+MTDPTTHHHDHAGVATTESGHRDDSRAENEDHTMEHGDHAGHGHHGGGHAGHGDHVGQFR
+RLFWINLIIAIPVVAFSPMFAMLLGYSVPSWAGWVAAVLGSVMYAWGGTPFLTGAVSELK
+SRQPGMMLLIALGITVAFLASWAATVGLVHPELEFWWELALLIVIMLLGHWIEMRSLAQT
+TSALDSLAALLPDEAERIEGDDVVKVDPAELRVGDVVIVRPGGSVPADGTIVDGRADMDE
+SMITGESHPVARGEGENVTAGTVATDSGLRVEITATGDDTALAGINRLVAEAQGSSSRAQ
+RIADRAAALLFWFALGAALITAVVWTLFGLPDDAVVRTITVLVIACPHALGLAIPLVVSI
+ATERAARGGVLIKDRLALESMRQVDAVLFDKTGTLTKGEPTVIGVEPTGGLNAEQLLALA
+ASAEADSEHPLARSIVTAAKEKGLAVEPASGFTSSPAVGVTATVADHEIRVGGPRLLEET
+GQDEIGVADEWRAEGAIILHVLRDGKVIGGLKLADEVRPESRDAVDALHQLGVEVVMITG
+DAEAVANEVGRELGIDRVFAGVRPEDKSAKVDQLQKEGKKVAMVGDGVNDAPALAQADVG
+IAIGAGTDVAIASAGVILASSDPRSVLSVIQLSRAAYRKMRQNLWWAAGYNLLSVPLAAG
+VLAPVGFVMPMSVGAILMSISTVVVALNAQLLRRIDLAPDASTRSVLEHQK
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000026.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000026.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f951df24536d3e8308274c61becff07a18efa3da
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000026.fa
@@ -0,0 +1,42 @@
+>0_115
+MSEQTTPDGAESPIIVERQGRVGHIRLNRPKALNALNEATMRAVVAAVQELDTDPEIGAI
+LLSGSPKAFAAGADIKEMATKEFSEMYAADWFAGWDGLTRARTPIVACVTGYALGGGCEL
+AMMADVLVAGEGAKFGQPEINLGVIPGMGGSQRLTRAVGKAKAMDMILTGRMIGAEEAER
+IGLVSRVVADEKALEEAQEVAAAIASKSKPAAWMAKETVNAAFETTLAQGIAFERRVFHS
+AFATTDQKEGMDAFANKREAGWQHR
+>1_236
+MSEQTTPDGAESPIIVERQGRVGHIRLNRPKALNALNEATMRAVVAAVQELDTDPEIGAI
+LLSGSPKAFAAGADIKEMATKEFSEMYAADWFAGWDGLTRARTPIVACVTGYALGGGCEL
+AMMADVLVAGEGAKFGQPEINLGVIPGMGGSQRLTRAVGKAKAMDMILTGRMIGAEEAER
+IGLVSRVVADEKALEEALEVAATIASKSKPASWMAKEAVNAAFETTLAQGIAFERRVFHA
+AFATADQKEGMDAFTAKREAGWQHR
+>2_84
+MNEQNRTEAAEAEQPVIVGRDGRVGRIQLNRPKALNALNAATMEAVVAAAVEMDADPEVG
+AILLLGSAKAFAAGADIKEMKDKDAADMYAADWFRRWEDLARLRTPIVACVQGYALGGGC
+ELAMMADVLVAGRSAKFGQPEITLGVLPGMGGSQRLTKSVGKAKAMDMVLTGRMVEAEEA
+ERMGLVSRLVEDEDAVATAEEVAATIAGFSKPVAQMNKEVVLNAFETPLTQGLVFERRVF
+HGVFSSEDQAEGMAAFAEKRSPVWKHR
+>3_84
+MSTGLHIETVDRIGIIRLDRPAELNALTFATVEEIAAQVQRWEVDGETDGVVITGSGQKA
+FAAGADIRELQHKSVQEMTARGMQHAMTALRESSLISVAAVNGLALGGGFELALSCDIRL
+ATPQASFGLPELGLGIIPGAGGTQLLTRYTNASVASYHILTGQPISADRAHQLGLVSELH
+EAEDLMAAAMEVIGTIASKGPLARQLAKRAIHGAAHAGMDSGLEIELLAQAAIFGTQERE
+EGLNAFLERRTPSFIPRPRPRKD
+>3_88
+MTDRIRTSVEQGVCTITLNRPGALNALENTMIATIVAELERAGADPDVRAILLRGEGKAF
+CAGDDLVDMGTEEHPESPDLVERYSRGYPAIVERMLTLEKPIVASVRRYALGAGLEMALA
+ADLIVAEPQAKLGLPFVLRGIAAGTSLLPKRAPVQLVQRMLYLGEMITAEDAHRMGVVGH
+LAEDEDVDELALATARRLAVGATRAIGLMKTALRTSETLSARDALAVQVGATAASVLTED
+FTEGKVAFTQKRDPEFGGR
+>3_2199
+MSEQTTPDGAESPIIVERQGRVGHIRLNRPKALNALNEATMRAVVAAVQELDTDPEIGAI
+LLSGSPKAFAAGADIKEMATKEFSEMYAADWFAGWDGLTRARTPIVACVTGYALGGGCEL
+AMMADVLVAGEGAKFGQPEINLGVIPGMGGSQRLTRAVGKAKAMDMILTGRMIGAEEAER
+IGLVSRVVADEKALEEALEVAATIASKSKPASWMAKEAVNAAFETTLAQGIAFERRVFHS
+AFATADQKEGMDAFTAKREAGWQHR
+>4_236
+MSEQTTPDGAESPIIVERQGRVGHIRLNRPKALNALNEATMRAVVAAVQELDTDLEIGAI
+LLSGSPKAFAAGADIKEMATKEFSEMYAADWFAGWDGLTRARTPIVACVTGYALGGGCEL
+AMMADVLVAGEGAKFGQPEINLGVIPGMGGSQRLTRAVGKAKAMDMILTGRMIGAEEAER
+IGLVSRVVADEKALEEAKEVAAAIASKSKPAAWMAKETVNAAFETTLAQGIAFERRVFHS
+AFATADQKEGMDAFTAKREAGWRHR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000027.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000027.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0101d03f1f53bf291c817ab734c295c01b80468b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000027.fa
@@ -0,0 +1,68 @@
+>0_161
+MSALRRWSALAVLVLPVLLISIDMSVLGIAVPALSADLDPTSGQLLWIIDLYSFLLAGLL
+IFMGSLGDRIGRRRILLIGAPLFGAASLAAAFASSAEMLIAARALLGVGGATLMPSTLGL
+IRTIFPDRAERRTAIAVWAMAFSGGAALGPVVGGILLERFWWGSVFLMNVPVMAVFLLVA
+PFLLPESRDPSPGPFDPLSSVLSIAGIVGLVYALKTAAKSPDWTALAGLVVGATALAWFI
+ARQRRLAHPMIDVALFRNVAFTSAVSVNVISVFAFMGLMFFLPQFLMLVQGMGPAEAGLW
+MLPLAAAAVVGTLLAPLLARVVAVRTVILTGLALVIAGFAVGTRLDGAAPLVAFVLLSCL
+FGVGVGLAETLTNDVILTAAPPERAGAAAAISETGYEFGGAMGTAVLGTVGMAVYAARVQ
+EAAGLPGLGPADAEAAAQTLAAAHRIGEGLPDGGARLVEVANGAFTAGMDLVAGIGIGVA
+AVTLLLAWRGLRSEARVERPVED
+>0_181
+MVILNETIMSVALPRLMAEFTVTAATAQWLTTGFMLTMAVVIPFTGWLLNRMSLRAVFIL
+AMGTFTAGTAIAGLAPTFGLLLTGRVVQAVGTAIMMPLLMTTVLNVVPLSRRGRVMGLIS
+IVISVAPASGPAVGGVILEHLSWRWLFFTVLPIAAIALAAGAAWVRNVTEPRPVRLDVLS
+GVLSAVGFASLIFGLSSIGEAAAGNAAMPPWIPVAVGVLALALFAVRQLRLKDDALLDLR
+TLSRPTFTVALAVMLTSMLALFGTIVLLPIYLQEVLGWTTQQSGLALLPGGMVMALLGYV
+VGHLYDRVGAPPLIVPGAVLGAAGLWGYTFLSEDSSAFMVVGLHVLISTGLSMLFSPLMT
+TALSALPRSLYAHGSALVSTLQQVAGAAGTALFITLLTVGTASSVAGGLGEVASLMDGVH
+LAFLSGALVFTVNVVAVWFVKRPAPNPL
+>0_2167
+MLSGTSTTSRGTGPAPVRAWLVLCAMSMLQFFIAVDVTVVNIALPSIGADLGVAGHSLTW
+VVVGYTITGGGLLMLGGRIGDLLGRRRTLLVGTSVFGAASLLAGLAPSFPVLVAARLLQG
+AGEAVALPAAMATIVLLFPEGPRRSRALSVWAAVASCGLVLGFALSGIITAHLGWRWVFL
+VSVPFILVVIVTALLLVPADRPASGGRVRLDLPGSLLLTACPLLFVYAAVEAGEPATGLW
+VSGVALLCAVLAAAGFVRVESRSPNPLVPLTFFADRARLRANLTTMLLSGALSTSFLLFT
+FYLQDRLGIGPLGAGLTMLPLAVALIVASVLVPRLLGRWGARACVLVGLGAAAGAMGVVA
+LVAVLGSGATWLLPAMLLIAAGMGFGLVGLQYIAVSGTTEEDAGIASGVQRASDQLGGAA
+GVAVYVGLGFAPALHADAGDPFVVAAVLAVVGLVVGAVVISRSPSTAAGQPQAG
+>0_2283
+MTVGAGLLLITLDNSILYTALPTLTADLGASGSSTLWIINAYPLVMAGLLLGAGTLGDRI
+GHRRMFVVGLWIFGAASLAAAFSPSPAFLIGARALLAVGAAAMMPATLALIRLAFDDPRE
+RNIAIAIWGSLSIAGAALGPILGGALLERFWWGSVFLINVPVVVIALVATAVIAPHNDPD
+PSKKWDLVSSLYAMVGLVGTVLVIKELAHIPQNWVLIAGALASAVIGFVLFVRRQGRLEE
+PLIEFSIFRNRAFAGGSLAAFFAMFTIAGAQLATTQRFQLVEGFTPLQAGLLVAAIALGA
+LPSGVLGAAILHIVGLRIIISGSLAIAALGLALAVLASANGSLPLLVVSFIVTGFGLGGT
+FAVASAAIMGNAPPRKAGMAASIEEVSYEMGSLSAVALLGSLLTFVYATVVRLPDGTPAA
+AGESIADALGIADGDLDVIAAATSAYDTAYLVTMIVLAVMLASGAALTNRLLRAYGRGSE
+AMEYAENH
+>1_161
+MTVGAGLLLITLDNSILYTALPTLTADLGASGSSTLWIINAYPLVMAGLLLGAGTLGDRI
+GHRRMFVVGLWIFGAASLAAALSPNPAFLIGARALLAVGAAAMMPATLALIRLAFNDPRE
+RNIAIAIWGSLSIAGAALGPILGGALLERFWWGSVFLINVPVVVIALVATAIIAPHNDPD
+PSKKWDLVSSLYAMVGLVGTVLVIKELAHIPQNWVLIAGALASAVIGFVLFVRRQGRLEE
+PLIEFSIFRNRAFAGGSLAAFFAMFTIAGAQLATTQRFQLVEGFTPLQAGLLVAASALGA
+LPSGVLGAAILHIVGLRIIISGSLAIAALGLALAVLASANGSLPLLVVSFIVTGFGLGGT
+FAVASAAIMGNAPPRKAGMAASIEEVSYEMGSLSAVALLGSLLTFVYATVVRLPDGTPAA
+AGESIADALGIADGDLDVIAAATSAYDTAYLVTMIVLAVMLASGAALTNRLLRAYGRGSE
+AMEYAENH
+>3_344
+MTVGAGLLLITLDNSILYTALPTLTADLGASGSSTLWIINAYPLVMAGLLLGAGTLGDRI
+GHRRMFVVGLWIFGAASLAAAFSPNPAFLIGARALLAVGAAAMMPATLALIRLAFDDPRE
+RNIAIAIWGSLSIAGAALGPILGGALLERFWWGSVFLINVPVVAIALVATAIIAPHNHPD
+PSKKWDLVSSLYAMVGLVGTVLVIKELAHIPQNWVLIAGALASAVIGFVLFVRRQGRLEE
+PLIEFSIFRNRAFAGGSLAAFFAMFTIAGAQLATTQRFQLVEGFTPLQAGLLVAAIALGA
+LPSGVLGAAILHIVGLRIIISGSLAIAALGLALAVLASANGSLPLLVVSFIVTGFGLGGT
+FAVASAAIMGNAPPRKAGMAASIEEVSYEMGSLSAVALLGSLLTFVYATVVRLPDGTPAA
+AGESIADALGIADGDLDVIAAATSAYDTAYLVTMIVLAVMLASGAALTNRLLRAYGRGSE
+AMEYAENH
+>4_1950
+MTVGAGLLLITLDNSILYTALPTLTADLGASGSSTLWIINAYPLVMAGLLLGAGTLGDRI
+GHRRMFVVGLWIFGAASLAAAFSPNPAFLIGARALLAVGAAAMMPATLALIRLAFDDPRE
+RNIAIAIWGSLSIAGAALGPILGGALLERFWWGSVFLINVPVVAIALVATAIIAPHNHPD
+PSKKWDLVSSLYAMVGLVGTVLVIKELAHIPQNWVLIAGALASAVIGFVLFVRRQGRLEE
+PLIEFSIFRNRAFAGGSLAAFFAMFTIAGAQLATTQRFQLVEGFTPLQAGLLVAATALGA
+LPSGVLGAAILHIVGLRIIISGSLAIAALGLALAVLASANGSLPLLVVSFIVTGFGLGGT
+FAVASAAIMGNAPPRKAGMAASIEEVSYEMGSLSAVALLGSLLTFVYATVVRLPDGTPAA
+AGESIADALGIADGDLDVIAAATSAYDTAYLVTMIVLAVMLASGAALTNRLLRAYGRGSE
+AMEYAENH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000028.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000028.fa
new file mode 100644
index 0000000000000000000000000000000000000000..caa185d4056673f119d92069d9c649d15c36a74e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000028.fa
@@ -0,0 +1,70 @@
+>0_241
+MSTSPSGSRVAEPGAATADRGQLHRGLSQRHIMFIALGTAVGTGLFYGSAGGIQAAGPGV
+ILSFLIAGAAVFLVMRALGEMTLREPVSGSFAAYASRYLGPFAGYVTGWTFVFELAVVIV
+ADTAAITAYMAFWFPEVPAWAWVAATILVVGLINFTHVGNFGEAEFWLTLVKVGAIVAMI
+FGGVILLFTGASTADGTQAGLANLVDHGGFLPHGILGVLTALTIVTFSFGGIETLGVAAG
+EAKNPEKVLPKAINTVPIRILLFYVLTMAVIMALVPWNQVDGKASPFVQIFEGLGVPFAP
+HLLNFVVLTAAVSAINACIYASGRLLYAMAHDGQAPRAFTHTNRGGVPWLSVAVMLGVMV
+LGAVLITVDPNAFSLVAGVASFAVVLTWAMIFLSHRAMRRRVAEQGAEPSPFPMPLGGVG
+TYLGLAFVATVVITMATIPDSRQALIIGLVWVAVLTLAWFVTGVRKAAAVHDRTGTLPVA
+SGEEAAASHR
+>1_126
+MSTSPSGSRVAETGAATADRGQLHRGLSQRHIMFIALGTAVGTGLFYGSAGGIQAAGPGV
+ILSFLVAGAAVFLVMRALGEMTLREPVSGSFAAYASRYLGPFAGYVTGWTFVFELAVVIV
+ADTAAITTYMAFWFPGVPAWAWVAATILVVGLINFTHVGNFGEAEFWLTLVKVGAIVAMI
+FGGVILLFTGASTADGTQASLANLVDHGGFLPHGILGVLTALTIVTFSFGGIETLGVAAG
+EAKNPEKVLPKAINTVPIRILLFYVLTMAVIMALVPWNQVDGKASPFVQIFEGLGVPFAP
+HLLNFVVLTAAVSAINACIYASGRLLYAMAHDGQAPRAFTHTNRGGVPWLSVAVMLGVMV
+LGAVLITVDPNAFSLVAGVASFAVVLTWAMIFLSHRAMRRRVAEQGAEPSPFPMPLGGVG
+TYLGLAFVATVVITMATIPDSRQALIIGLVWVAVLTLAWFVTGTRTSAAAHDRTGTLPVV
+RTRQSHED
+>2_176
+MNASPSGAHAVDHPRDDAAHAAQSQLHRGLSQRHIMFIALGTAIGTGLFYGSAGGIQTAG
+PGVILSFLIAGFAVYLVMRALGEMTLREPVSGSFAAYASRYLGPFAGYVTGWTFVFELAV
+VIVADTAAVTKYMAFWFPGVPAWAWVAATILVIGLVNLTHVGNFGEAEFWLTLIKIGAIV
+AMIFGGLILMFTGASFTDGTPAGLHNLVDHGGFLPHGFGGVLIALTIVTFSFGGIETLGV
+AAGEAKDPETALPKAINTVPVRILLFYVLTMVVIMSLVPWSAVDGKTSPFVQIFEGLGVP
+FAPHILNFVVLTAAISAINACIYASGRLLYAMAHDGQAPRAFTRTTANGVPWLTVAVMLG
+VMVLGAILITVNPDAFGLIAGVASFAVVLTWTMIFLSHRAMRARVKEAGAPPSVYPMPFG
+IVGTVLGLAFVATVVITMATIPESRQALLIGLAWVVALTAAWFVTGVRKTAALHDRTGQL
+PVVHRHH
+>2_177
+MQSTPAPEAPAQAQLQRGLNPRHITFIALGTAVGTGLFYGSAAGIQAAGPGVVLAFMLAG
+AAVYLVMRALGEMAVREPISGSFVAYASRYLGPFAGFLTGWTYVFELAVVIVADTTAVTV
+YMAFWYPDVPAWVWVAATMVVLGLINVTHVGSFGEAEFWFSLIKVLAIVGMIFGGVILMF
+SGASFQDGVTPGPHNLVEHGGFLPHGLMGVLTALTIVTFSFGGTETLGIAAGEAEDPASA
+LPRAVNTVPVRILFFYIGSMLVIMSLVPWTTVDGETSPFVQIFETLGVPFAPHLLNFVVL
+TAAVSAINACIFTNARLLHHMAHDGHAPRVFTAVTRGGVPWVTVVAMLGVMAAGAVFMSV
+KEDTFGIVAGVATFAVVFTWALILASHLGMRRALARHGQAPGAFPMPGGRVGAWLGLAFV
+AVVAGTMAFDQGGAVLGALGGPDALQTALAQPFVIGVLWLAVLAAAWAVPAVRRSAHRHD
+RHGTPPPLTWDV
+>2_2128
+MTPERRGPGTSPGGRYGVRVNEPPALPEPTGAAPPAPSPAGGATAAPSHGAADARLRRGL
+SMRHIQFIALGSAIGTGLFYGSATAIQLAGPAVILAYLVAGAAVFMVMRALGELAVRHPV
+PGSFGQYADRYLGPFAGFVTGWTFVFEMVVVAIADVTAFGVYMGFWFPDTPRWIWVTAVI
+LFIAAVNTRHVKVFGELEFWLSIVKVSAILAMVIGGVALLVMGVSLDAATPAGVQNLVDH
+GGFAPHGAAGVLAALSVVVFAFGGVETIGITAGEAQDPGRAIPRAVNAVPARILLFYVMT
+MVVIMSLVPWDRITGEASPFVEIFSTLGVPAAPAILNLVVITAAISAINADTFSAGRMLF
+GMAQQGRAPAVFASVSRGGVPWMAAVVMGLALAVGAVLNAVIPEDVFVVVASIATFATVW
+VWLMILLAHIAMRREVARRGLPASAFPVPLWPAASWAAVAFVLLVVGLLGWFSDTRVAMI
+VGLVWLVLLGAAYRLFLHGHGRSRPDLEEGAASSP
+>3_2091
+MSTSPSGSRVAETGAATADRGQLHRGLSQRHIMFIALGTAVGTGLFYGSAGGIQAAGPGV
+ILSFLVAGAAVFLVMRALGEMTLREPVSGSFAAYASRYLGPFAGYVTGWTFVFELAVVIV
+ADTAAITTYMAFWFPGVPAWAWVAATILVVGLINFTHVGNFGEAEFWLTLVKVGAIVAMI
+FGGVILLFTGASTADGTQASLANLVDHGGFLPHGILGVLTALTIVTFSFGGIETLGVAAG
+EAKNPEKVLPKAINTVPIRILLFYVLTMAVIMALVPWNQVDGKASPFVQIFEGLGVPFAP
+HLLNFVVLTAAVSAINACIYASGRLLYAMAHDGQAPRAFTHTNRGGVPWLSVAVMLGVMV
+LGAVLITVDPNAFSLVAGVASFAVVLTWAMIFLSHRAMRRRVAEQGAEPSPFPMPLGGVG
+TYLGLAFVATVVITMATIPDSRQALIIGLVWVAVLTLAWFVTGTRTSAAAHDRTGTLPVV
+RTRQSHED
+>4_134
+MSTSPFGSRVAETGAATADRGQLHRGLSQRHIMFIALGTAVGTGLFYGSAGGIQAAGPGV
+ILSFLVAGAAVFLVMRALGEMTLREPVSGSFAAYASRYLGPFAGYVTGWTFVFELAVVIV
+ADTAAITTYMAFWFPGVPAWAWVAATILVVGLINFTHVGNFGEAEFWLTLVKVGAIVAMI
+FGGVILLFTGASTADGTQASLANLVDHGGFLPHGILGVLTALTIVTFSFGGIETLGVAAG
+EAKNPEKVLPKAINTVPIRILLFYVLTMAVIMALVPWNQVDGKASPFVQIFEGLGVPFAP
+HLLNFVVLTAAVSAINACIYASGRLLYAMAHDGQAPRAFTHTNRGGVPWLSVAVMLGVMV
+LGAVLITVDPNAFSLVAGVASFAVVLTWAMIFLSHRAMRRRVAEQGAEPSPFPMPLGGVG
+TYLGLAFVATVVITMATIPDSRQALIIGLVWVAVLTLAWFVTGTRTSAAAHDRTGTLPVV
+RTRQSHED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000029.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000029.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b6975385d8635dbc365bc774fb1fb464dfbadc21
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000029.fa
@@ -0,0 +1,21 @@
+>0_277
+MNFALDGRNYEIDLSKEHADELREFLKPYMKKGRAVAPPSPKVEAAQIRKWAAENGYEVS
+SRGRLHRDVVEAYRNARRK
+>1_95
+MNFALDGRNYEIDLSKEHAAELREFLKPYMKKGRAVAPPSPKVEAAQIRKWAAENGYEVS
+SRGRLHRDVVEAYRNAKRK
+>2_600
+MATITTIADDFDNSTPAETTYFSVNGKEYAIDLNEEHRRELEDVLEEVAERLSKYTAVAR
+PLGKSSAPARKSSKSPSSRSGASYDAGAVRSWAEENGYKVADRGRISADVLEAYNASKKG
+>2_653
+MAIISTVADDFDGSTPAEAVRFSVAGRDYEIDLSKEHRAELDAIMAEFQDRLKKFTDVAR
+PAGRAASTGRTPARRSSGSGVDASTVRLWAVENGFDVKDRGRIPVEVMDAYRNRGKKG
+>3_2059
+MNFALDGRNYEIDLSKEHAAELREFLKPYMKKGRAVAPPSPKVEAAQIRKWAAENGYEVS
+SRGRLHRDVVEAYRNAKRK
+>4_90
+MNFALDGRNYEIDLSKEHAAELREFLKPYMKKGRAVAPPSPKVEAAQIRKWAAENGYEVS
+SRGRLHRDVVEAYRNAKRK
+>4_1954
+MAIISTVADDFDGSTPAEAVRFSVAGRDYEIDLSKEHRAELDAIMAEFQDRLKKFTDVAR
+PAGRAASTGRTPARRSSGSGVDASTVRLWAVENGFDVKDRGRIPVEVMDAYRNRGKKG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000032.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000032.fa
new file mode 100644
index 0000000000000000000000000000000000000000..34c281f25f0f30072bd35bb21eb2046269630a9f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000032.fa
@@ -0,0 +1,35 @@
+>0_382
+MPIPQPHREGHHRPPGLPPRPGRRQVLAGLAGVASLPLLAACSAEDPLAAQAGKADGKNY
+IAGDGSVLEIGPAERGEPVQFSSAMFSGEPIIAQDLAGDPAVLNFWYAACAPCRVEAPDL
+QALHEQFAPEGVRFLGINVRDTIATAQAFERKFGITYPSVEDRGGQVLLAMTDYVPPQAV
+PTTIVLDHQGRVSARILGIAERSTLRTLITTVLDEQA
+>0_1045
+MHTPPRPSRRTLLTGLALASLAPALAACSGGDDSLARQAGNADGKNYIAGDGSVLEIAPA
+ERGAPVEFAAELFDGTPVTGASLRGTPALLNFWYAACAPCRVEAPHLVSLHEQFAPQGVR
+FLGVNVRDTVTTAQAFERTFEIPYPSIEDTRGDVLLNMADYVPPQAVPSTLVLDVEGRVA
+ARVLGAVEESTLRALLTTVVDEAAA
+>0_2584
+MNRRRTGAALALPIAALFALAGCSGGDGNLAAEWNEASGKGYVSGDGSSLSIAPDQRTEP
+VEFSGETEDGDIYGSDDTVGSVTVVNFWYAGCAPCRAEAPDLVEAYDEFSPQGVKFVGVN
+TRDQVAQARQFSVRFDIEYPSIMDNAGGRAVQRAFAGQVPLNAVPTTLVLDAEGRVAHRV
+LGQLAGASQLRTLIGETLAEAGGGAAADPASDPAPADEATEQ
+>1_1749
+MQTPRPSRRTVLTGLSLLGLAPVLAACSGDDSLTRQAGNADGKNYIAGDGSVLEIAPAER
+GAPVEFAAELFDGTPVTGASLRGTPALLNFWYAACAPCRVEAPHLVSLHEQFAPQGVRFL
+GVNVRDTVTTAQAFERTFEIPYPSIEDARGEVLLNMTDYVPPQAVPSTLVLDVEGRVAAR
+VLGAVEESTLRALLTTVVDEAAA
+>2_981
+MPFPPRPSRRAALAGLSAAALAPLLAACSGTDDSLAQQAGNAGGKNYIAGDGSVVEYAAD
+QRGAPVEFSAAGFDGETVSGETLRGEPALLNFWYAACAPCRVEAPHLVKLHGEFEPKGVR
+FLGVNVRDTVTTAQAFERTFGIPYSSVDDTSGSVLLAMSDYVPPQAVPSTLVLDRQGRVA
+ARVLGAVEEGTLRALLDTVVAEA
+>3_1457
+MQTPRPSRRTVLTGLSLLGLAPVLAACSGDDSLTRQAGNADGKNYIAGDGSVLEIAPAER
+GAPVEFAAELFDGTPVTGASLRGTPALLNFWYAACAPCRVEAPHLVSLHEQFAPQGVRFL
+GVNVRDTVTTAQAFERTFEIPYPSIEDARGEVLLNMTDYVPPQAVPSTLVLDVEGRVAAR
+VLGAVEESTLRALLTTVVDEAAA
+>4_1671
+MHTPPRPSRRTLLTGLALASLAPALAACSGGDDSLARQAGNADGKNYIAGDGSVLEIAPA
+ERGAPVEFAAELFDGTPVTGASLRGTPALLNFWYAACAPCRVEAPHLVSLHEQFAPQGVR
+FLGVNVRDTVTTAQAFERTFEIPYPSIEDARGDVLLNMTDYVPPQAVPSTLVLDVEGRVA
+ARVLGAVEESTLRALLTTVVDEAAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000046.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000046.fa
new file mode 100644
index 0000000000000000000000000000000000000000..19581ac69e20b4cf5ebaf876ccdd27c3d5248a32
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000046.fa
@@ -0,0 +1,70 @@
+>0_818
+MLFHHHGYVSTDPRVQPAAGIGLDRPAELPDEMDVLIVGSGPAGMIAAAQLAMFPDVHTR
+IIERRSHRLEIGQADGIQARSVETFQAFGFASQIIDEAYDLTSMAFWNPSSEDADTIVRT
+SLAEDDPEGVSEFPHLIVNQARILDWFAAYMKNSPTRAEPDYGWSFESLEDSAEGEYPVL
+VTLRRTVDAQGEPLADPESGETRQVRAKYVVGADGAGSRVRKAIGHSLAGGASNHAWGVM
+DALAVSDFPDIRTKCAIHSSTGSILHIPREGGHLFRMYVDLGEVPADDNHKVRQTPIEEI
+IRRAQQIIRPYTLEVKDVAWHSVYEVGHRLTSGFDNRERVDHPNVFLLGDACHTHSAKAG
+QGMNVSMQDGWNLGWKLGQVLSGVAPAELVPTYSEERKEIAKNLIDFDKEWSTLMAKPTS
+ELGDPNEVADFYTKTAEFPAGFMTEYKPSILTTDATGQSLAAGFPIGKRFKSALVERSCD
+TNVKHLGHLHRADGRWRVYVFADAASPRSADSKVAAWAKAVEEDPRSFRNRHTPADGPQD
+ARFDVKVVYQQKQTEFAHPDVPAVFRPTSGDLRLLDLNNIFATCQPKHGEDIFEARGISR
+DGAVVVVRPDHYVSGVFGLDEVERLNEFFAGVLLDAS
+>1_1944
+MLFHHHGYVSTNPRVQVAAGIGLDRPAELPDEMDVLIVGSGPAGMIAAAQLAMFPDVHTR
+IIERRPHRLEIGQADGIQARSVETFQAFGFASEIIDEAFDLTSMAFWNPAEDDADTIVRT
+SLAEDDPEGVSEFPHLIVNQARILDWFAEYMKNSPTRARPDYGWAFETLEDTNDGEHPVL
+VTLRRTVDAEENALEDPASGPTRQVRAKYVVGADGAGSRVRKAIGHTLTGDAANHAWGVM
+DALADTDFPDIRTKCAIHSSSGSILLIPREGGHLSRMYVDLGEVPADDDHKVRQTPLEEI
+IRRAQQILRPYTLDVKEVAWHSVYEVGHRLTSGFDNRERVAHPNVFLLGDACHTHSAKAG
+QGMNVSMQDGWNLGWKLGQVLSGLAPVELVPTYAEERKEIAKNLIDFDKEWSTLMATPTS
+ELGDPNEVAEFYTKTAEFPAGFMTEYQPSLLTTDATGQALAQGYPIGKRFKSALVERSCD
+TNVKHLGHLHRADGRWRVYVFADAASPRAEDSKVAAWAKAIEEDPRSFRNRHTPSDGPED
+ARFDIKVVYQQKQTEFAHPDVPSIFRPTTGSLGLHDLNNIFATCRPQHGEDIFEARGISR
+DGAVVVVRPDQYVSGVFGLDEVDRLNAFFAGVLLDAN
+>2_756
+MLFHHHGYVSTDPRMKPAAGIGLDRPAELPDEMDVLIVGTGPAGMIAAAQLAMFPDVHTR
+IIERRGKRLEIGQADGIQARSVETFQAFGFASQIIDEAYDLTSMAFWNPSPEDEDAIVRT
+SLAEDDPHGVSEFPHLIVNQARILDWFAEFMKNSPTRATPDYGWEFVSLDDSDQDAERPV
+QVTLRRTVDAKGNPLAEGVAGEERVVRAKYVIGADGAGSRVRKAIGHSLSGDAANHAWGV
+MDVLADSNFPDIRTKCAIHSSSGSILHIPREGGHLFRMYVDLGEVPADDNHKVRQTPIEE
+VIRRAQQIIRPYTLDVKDVAWSSVYEVGHRLTSGFDNRERCTHPNVFLLGDACHTHSAKA
+GQGMNVSMQDGWNLAWKLGQVLSGIAPAELVPTYSEERKEIAKNLIDFDKEWSTLMAKPT
+SELGDPNEVAEFYTKTAEFPAGFMTEYRPSMLTTDAAGQELATGFPIGKRFKSAKVERSC
+DTNVKHLGHLHTADGRWRVYVFADAAAPHDADSKVAAWAEAVEEDPQSFRNRHTPAGAPQ
+DERFDLKVVYQQKQTEFAFPDVPAVFRPTTGPLGLHDLNNIFAVCRPEHAEDIFELRGVS
+RDGAVVVVRPDQYVSGVFGLDEVDRLNAFFAGVLLDAN
+>3_1665
+MLFHHHGYVSTNPRVQVAAGIGLDRPAELPDEMDVLIVGSGPAGMIAAAQLAMFPDVHTR
+IIERRPHRLEIGQADGIQARSVETFQAFGFASEIIDEAFDLTSMAFWNPAEDDADTIVRT
+SLAEDDPEGVSEFPHLIVNQARILDWFAEYMKNSPTRARPDYGWAFETLEDTNDGEHPVL
+VTLRRTVDAQGNALEDPASGPTRQVRAKYVVGADGAGSRVRKAIGHTLTGDAANHAWGVM
+DALADTDFPDIRTKCAIHSSSGSILLIPREGGHLFRMYVDLGEVPADDNHKVRQTPLEEI
+IRRAQQILRPYTLDVKEVAWHSVYEVGHRLTSGFDNRERVAHPNVFLLGDACHTHSAKAG
+QGMNVSMQDGWNLGWKLGQVLSGMAPVELVPTYSEERKEIAKNLIDFDKEWSTLMAKPTS
+ELGDPNEVAEFYTKTAEFPAGFMTEYQPSLLTTDATGQALAQGYPIGKRFKSGLVERSCD
+TNVKHLGHLHRADGRWRVYVFADTASPRAEDSKVAAWAKAIVEDPRSFRNRHTPSDGPED
+ARFDIKVVYQQKQTEFAHPDVPSIFRPTTGPLGLHDLNNIFATCQPKHGEDIFEARGISR
+DGAVVVVRPDQYVSGVFGLDEVDRLNAFFAGVLLDAN
+>4_165
+MFIAGDACHTHSAKAGQGMNVSMQDGWNLAWKLGQVLEGRSDASLLATYSEERQQIAENL
+IEFDKAWEGMMSKRPDELEDPQAVGRFYKDNAEFPNGFATQYPASSVTGEDTHQALAAGV
+PIGKRFESAAVRRVADTSPRQLGHLFEADGRWRLYAFADEDRTAVGELADWLADSPDSPV
+RRFTPESADLNSVFDAKVVYQQPYQEVELADVPALFLPKMGPYQLTDKEVVFAADLADDI
+FEARGIDRGGALIIQRPDMYVAHVLPLSAREEITAFFEQNMVSASV
+>4_166
+MRGAADPRRSLSTLPTTAVSEFPFLIVNQARVIDYFAEYAERGPQGQERTVRAKYVVGCD
+GSRSRVRDCTGIEVVRDPSAHAWSVMDVLLETDFPDNRQKCGIQSDKDGTILLIPREGGF
+LARFYVSLGSIDDAPRPRSGGGIRACSSPATPATPTPPRPARA
+>4_1883
+MLFHHHGYVSTNPRVQVAAGIGLDRPAELPDEMDVLIVGSGPAGMIAAAQLAMFPDVHTR
+IIERRPHRLEIGQADGIQARSVETFQAFGFASEIIDEAFDLTSMAFWNPAEDDADTIVRT
+SLAEDDPEGVSEFPHLIVNQARILDWFAEYMKNSPTRARPDYGWAFETLEDTNDGEHPVL
+VTLRRTVDAQGNALEDPASGPTRQVRAKYVVGADGAGSRVRKAIGHTLTGDAANHAWGVM
+DALADTDFPDIRTKCAIHSSSGSILLIPREGGHLFRMYVDLGEVPADDNHQVRQTPLEEI
+IRRAQQILRPYTLDVKEVAWHSVYEVGHRLTSGFDNRERVAHPNVFLLGDACHTHSAKAG
+QGMNVSMQDGWNLGWKLGQVLSGMAPVELVPTYSEERKEIAKNLIDFDKEWSTLMAKPTS
+ELGDPNEVAEFYTKTAEFPAGFMTEYRPSLLTTDATGQALAQGYPIGKRFKSALVERSCD
+TNVKHLGHLHRADGRWRVYVFADAASPRAEDSKVAAWAKAIEEDPRSFRNRHTPSDGPED
+ARFDIKVVYQQKQTEFAHPDVPSVFRPTTGSLGLHDLNNIFATCRPTHGEDIFEARGISR
+DGAVVVVRPDQYVSGVFGLDEVDRLNAFFAGVLLDAN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000047.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000047.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9cc166f40582b6e3b826ecc16771256dad5eeb01
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000047.fa
@@ -0,0 +1,42 @@
+>0_836
+MTLLEVHDVDKTFHSGGEAVPVLRGASLLVPAGEMHAVTGPSGSGKSTLLRILACLDSPD
+SGRVLLGGEPLPEPWSRGGDRYRNQRCGIVLQDFALMEHATALENVMLPLRYGPDRVPRG
+EQRRRAGEALERVGLGTRTGHRARTLSGGEKQRVAVARALINEPPLVLADEPTGALDQER
+TRDVVDLLRGAVGPERAVVVVTHDPRVAAACDRRWHLVDGGLAPQD
+>0_989
+MSDGSAPPLLELAGVLKSFKGADRPALDGVDLTVRDGDFVAIVGPSGSGKSTLLNVLGLL
+DRPDGGSYRVSGTDTMSMGERERDRLRSRWFGFVFQSSHALGDEPVAVNAALGLRVQRTP
+PEQRDARAGEALALLGLSHRLDTRAKLLSGGERQRLAIARAIATRPRVILADEPTGNLDS
+VNSRIVIDHLRALHAQGATVLLITHDPEIARQADRQVRIEDGRITELAGHRTAASASADM
+AGTGHGWSAPGAARRHRSPRSSAMLDDLVEAVSSLSTRFLRTVLLMAAFAVGIGGLVASV
+GLTQTATDQVGALLTAAALDEVVVTVPQAEGLLDPGDGRLASWADGLAALPHVTAAGHVA
+QVAPADVVITRHDPSDPEPAVAISLVAASSSYAGLAGLTLPSETSRTLLDSPDARLAWAT
+PAAARALELPVTDTGMLSPGYRVWIQGHAVDVAGIVTLSERTPELDASLVVTPAVMTGVA
+QAHPQLVVRTEAGFPYPVSQAAPLVIAPENPGSVTVRTVADLRNLRAGVSDDLGAFVGVL
+SGVLLVLAVISASTAMYLSVQARTAEIALRRAIGSPRGLIARLFLLEGALIGLAGGAVGA
+AVGSGVILAVSQARGWAAVLPPGAVPLALGLGLVAGVVSALYPGWVASRQRPADALRG
+>2_774
+MSLLEVHDVDKSFTTAASEVPVLRGVSLSVPAGQMHAVTGPSGSGKSTLLRILACLDSPD
+AGEVLLEGVPLPPPWSRGGDRHRNRRCGIVLQDFALMEHATALDNVLLPLRYGPGGGSRA
+EQRRRAALALDRVGLADRAHHRARTLSGGEKQRVAVARALINDPPLVLADEPTGALDQAR
+TRDVVKLLRSAVGPQRAVVVVTHDPEVAAACDQRWHLEDGRLHSQG
+>2_851
+MTASAPVLTLDRVQVGYRHPDGGTRVLIESLDLTLAPGEVVGLWGRSGTGKSSLIRHLAG
+LSRPLAGRIAYRSPDGSLNGEVADLSAGDLARYRREHLGYVDQSCELIGELSALDNAAVW
+IHGGRIAGSACDAQETVQGLLERLGLGHRLGAPASRLSGGEAQRVALVRALSKRPHLIVA
+DEPTGHLDGVTAREAIALLREHAEAGAAVLVASHDPLVHAAVDRAVRVGED
+>2_923
+MNTAPLTPPVLAARGLTKAYGSTHALTGVDLEIRPGESVAVMGPSGSGKTTLLHVLSGII
+APDGGRVTLAGADGTVHEVTALTEEQRARLRRERLGFVFQEGLLLPELTAVENVAMPLML
+NGVDRRAAEQTAARWLGSLGLAGMEDRRPGELSGGQRQRVAIARAQAVEPDVVFADEPTG
+ALDSDTSEAVLDSLIASTVARGRTLVVVTHDPSVAAACSRLIRVRDGRIESDQAQAAAGT
+TREQVR
+>3_1646
+MEHATALENVMLPLRYGPDRVPRGEQRRRAGEALERVGLGMRTGHRARTLSGGEKQRVAV
+ARALINEPPLVLADEPTGALDQARTRDVVDLLRGAVGPERAVVVVTHDPRVAAACDRRWH
+LVDGELAPQD
+>4_708
+MSLLTVHDVHRSYRGPAGDVPVLRGVSLQVPGGGVHAIMGPSGSGKSTLLRLLACLDTPD
+AGSIRVAGRSLPAPWSSDGDAYRNRTCGIVLQDHLLIDRATAVDNAALPLLYARPRTSKR
+ERRTMAAELLTRLGLGDRLHHPVGRLSGGERQRVAIARAVIMGPSLLLADEPTGALDEER
+TDEVMGLFRSMSQPERAIVVVTHDPAVAARCDHTWRLRAGRLE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000053.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000053.fa
new file mode 100644
index 0000000000000000000000000000000000000000..037288372d23026faff57046c26ed9b8599b110f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000053.fa
@@ -0,0 +1,33 @@
+>0_2132
+MRAPGVRGAVALGGAAGVVAGSTAMELVGVGGLLALAGRDGGVGLGPVAALAFAALPLAV
+VNVLGSFLLGLLLARSRHAGLDRRPALVAGLGTGFLGSFTTIATAAAVFLLTPLEAGWSA
+IAASSGVGGFLSATAGLLLPPLALLALLAALSTAAAVLGLRLGGAPARGADAEARVDGVA
+SDGTAADGAPA
+>1_722
+MAARGETTADRRGGRGTDRRPGTAGAVALGGAAGVLCGAGVMNAVTALAGAPNFRGTFGA
+AFGAVDVLVQALPLFVVNVLGSFLLGLLWAASRRRGPDWRPRLVAGLGTGFLGAFTTISS
+AVALVLWPVRLGAAVSGAGGVLAAAVAVLLVLALMAALSTAAAMLGLRAGGAPGSRVVGT
+DRSEEDA
+>2_668
+MNAALIVVVALGGGAGAAGRFLLDGLINTGREFRLPVGTLTINITGSLLLGIIVGAATHL
+GAVPVAVLGTGVMGGYTTFSTASFETVRLARSGRITAAAINGLGMLVVSVAAATAGILLG
+GTL
+>2_669
+MTTRTDTPMPDDQLPPDPDVDVSDPATTMRPVHLRWRYVGLVAVGGAGGTALRDVISSVL
+PADGGVSWSIFWINITGALALGVLLEALAHRGPDAGRRRVLRLLLGTGVLGGFTTYSTLA
+ESTAALFLDGHGLAGTGYALLTVLSGAIATACGLVVAGWFRPRTEEA
+>2_2026
+MADARPAAGGAAARRTLPWVALGGAAGALASLGAGALIAQAMGPGDPSISGPLGTASATL
+ASVAAVNVLGSFLLGLLRGASGRPGARWDPRLVAALGTGFLGAFTTFGTVAATLALPVMM
+TAGLAATGDTWWILLAVVVVGLLIAVAVLAALSTAAAALGLHLGGRGAGSGSAGRPDGAA
+A
+>3_461
+MAARGEPTADRRGGRGTDRRPGTAGAVALGGAAGVLCGAGVMNAVTALAGAPNFRGTFGA
+AFGAVDVLVQALPLFVVNVLGSFLLGLLWAASRRRGPDWRPRLVAGLGTGFLGAFTTISS
+AVALVLWPVRLGAAVSGAGGVLTAAASVLLVLALMAALSTAAAVLGLRAGGAPGSRVVGA
+DRSAEDA
+>4_686
+MAARGETTADRRGGRGTDRRPGTAGAVALGGAAGVLCGAGVMNAVTALAGAPNFRGTFGA
+AFGAVDVLVQALPLFVVNVLGSFLLGLLWAASRCRGPDWRPRLVAGLGTGFLGAFTTISS
+AVALVLWPVRLGAAASGAGGVLAAAVAVLLVLALMAALSTAAAVLGLRAGGAPGSRAVGT
+DRSAEDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000056.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000056.fa
new file mode 100644
index 0000000000000000000000000000000000000000..50868a32b2df46075a17182e9d91515b3c36635d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000056.fa
@@ -0,0 +1,36 @@
+>0_15
+MANTTYTLVLLRHGQSDWNEKNLFTGWVDVPLTEKGRAEASRGGELMKAEGIHPDVLHTS
+LLKRAITTANLALETADRQWIPVKRDWRLNERHYGALQGKDKAQVKEEFGEEQFTVWRRS
+FDTPPPALDDSSEFSQIGDERYAELGDDAPRTEALKNVIDRLIPYWEAEIVPDLKASKTV
+LVAAHGNSLRALVKHLDGISDEDIAGLNIPTGIPLVYELDEDLKPITANGRYLDPEAAAA
+GAAAVAAQGSAH
+>1_304
+MANTTYTLVLLRHGQSEWNEKNLFTGWVDVPLTEKGRAEAARGGELLEAEGIRPDVVHTS
+LLKRAITTANLALEAADRQWIPVKRSWRLNERHYGALQGKDKAQVKEEFGEEQFMVWRRS
+FDTPPPALDDDSEFSQVGDERYADLGKDAPRTEALKQVVDRLLPYWEEQVLPDLKAGKTV
+LIAAHGNSLRALVKHLDGISDEDITGLNIPTGIPLVYELDQNFKPITANGRYLDPEAAAA
+GAAAVAAQGSAH
+>2_11
+MADTFKLILLRHGQSDWNEKNLFTGWVDVPLTEKGRAEASRGGELLAAEGLLPDVLHTSL
+LKRAITTANLALEAADRQWIPVKRSWRLNERHYGALQGKDKAQVKEEFGEEQFMTWRRSF
+DVPPPPLDDSSEFSQAGDERYRDIGPDAPRTEALKQVIDRLLPYWTEQIVPDLKAGKTVM
+VAAHGNSLRALVKHLDGISDEEISGLNIPTGIPLFYELDQNLKPVTPHGRYLDPEAAAAG
+AAAVAAQGDKK
+>2_670
+MLTLLRHGESTANEAGTFTGLLDVPLTHRGERQASAAGQLLRSNHITPDVVVTSTLRRAV
+RTAELVCDALGTQLPTEAVWQLNERNYGALTGMTKTDARRMLGDDEYVRLRRSRTGTPPP
+MSLHLWEELRSSSALRGLPDGALRRTEALSDVIKRVRPVLHDRLLPMVRSGRSVLVVAHG
+NSLRALCACIDDLTDPELEQLNLPTGQPVQYHLAPTGALVPRGGAFLDPVAAQHAAALVA
+AEGGT
+>3_28
+MANTTYTLVLLRHGQSEWNEKNLFTGWVDVPLTEKGRAEAARGGELLEAEGIRPDVVHTS
+LLKRAITTANLALEAADRQWIPVKRSWRLNERHYGALQGKDKAQVKEEFGEEQFMVWRRS
+FDTPPPALDDDSEFSQIGDERYADLGKDAPRTEALKQVIDRLLPYWEEQILPDLKAGKTV
+LIAAHGNSLRALVKHLDGISDEDIAGLNIPTGIPLVYELDQNFKPITANGRYLDPEAAAA
+GAAAVAAQGSAH
+>4_311
+MANTTYTLVLLRHGQSEWNEKNLFTGWVDVPLTEKGRAEAARGGELLAAEGIRPDVVHTS
+LLKRAITTANLALEAADRQWIPVKRSWRLNERHYGALQGKDKAQVKEEFGEEQFMVWRRS
+FDTPPPALDDDSEFSQVGDERYADLGKDAPRTEALKQVIDRLLPYWEEQVLPDLKAGKTV
+LIAAHGNSLRALVKHLDGISDEDIAGLNIPTGIPLVYELDQNFKPITANGRYLDPEAAAA
+GAAAVAAQGSAH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000058.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000058.fa
new file mode 100644
index 0000000000000000000000000000000000000000..08936aa4255bab0bbbb19546e197433f71c3fe17
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000058.fa
@@ -0,0 +1,52 @@
+>0_31
+MSPFDLEELDMTATAPDPLDGAFTAAWLTSQTFAPVEYVVPGLIPEGLTLLVAAPKVGKS
+WMVLDLAHAAATGGKALGSISVDRRPVLYLALEDGPRRLQSRLSMLGVDGGGPDLMFLTA
+LSASPVATVAAYLERHAQDRPLVILDTLGKVRGRDGGNDQYGRDYSQMSALKTLVDAVPG
+SSLIVVHHTNKGGREDFLEAVSGTQGLAGAADSILVIRRDRNQADGTINVTSRDAREGEY
+AVTFDGSRWHTVGADLAEAAAAAESKRATAGVGDDMARVIDAVSRHPGGVGVAQIVAMTE
+LPRATVDKYLSRAVAAERIVRVERGTYAPTPLSEVSDCQIGSDPDPLDF
+>0_270
+MATKTAAKRAPGYRCTECGWTTVKWVGRCGECQAWGTVEEVGLTSTTGRTRAATVAEVAP
+RIADVDATLASFRSTGVRELDRVLGGGLVPGAVILLAGEPGIGKSTLLLDVAAQTARGAG
+GGGPRSVLYLTGEESAAQVRSRADRIGAIADTLRLTAETDLGRALGQIERTDPELVIVDS
+VQTLQSTEVDGIAGGVSQVREVAASLIRTAKEKGITTVLVGHVTKDGTIAGPRLLEHLVD
+VVCQFEGDRHSRLRLVRAVKNRFGPTDEVGCFDLREDGIESLDDPSGLFLSGVAEPVEGT
+CVTVTLEGRRPLVAEVQSLLTPSAGGGPRRTVSGVDAARVNMLLAVLQRRARFALAQDDC
+YVATVGGVRLSEPASDLAVAVAVASAKLAAPVPQGMIAVGELGLAGEVRPVPGIGRRVRE
+AARLGFTRALVPRSPEPLGDVPAGFTVAQVGSIGEALATIPTWTGAGAGA
+>1_101
+MATKTAPKRAPGYRCTECGWTTVKWVGRCGECQSWGTVEEIGLTSTTGRTRAATVAEVAP
+RIADVDATLASFRSTGVRELDRVLGGGLVPGAVILLAGEPGIGKSTLLLDVAAQTARGAG
+GGGPRSVLYLTGEESAAQVRSRADRIGAIADTLRLTAETDLGRALGQIERTDPELVIVDS
+VQTLQSTEVDGIAGGVSQVREVAASLIRTAKEKGITTVLVGHVTKDGTIAGPRLLEHLVD
+VVCQFEGDRHSRLRLVRAVKNRFGPTDEVGCFDLREDGIESLDDPSGLFLSGVSEPVEGT
+CVTVTLEGRRPLVAEVQSLLTPSAGGSPRRTVSGVDAARVNMLLAVLQRRARFALAQDDC
+YVATVGGVRLSEPASDLAVAVAVASAKLSAPVPQGMIAVGELGLAGEVRPVPGIGRRVRE
+AARLGFTRALVPRSPEPLGDVPAGFTVAEVGSIGEALATIPTWTGGGPAAHPEAGPGR
+>2_217
+MATKSSTKRAPSYRCTECGWTTVKWVGRCGECQAWGTVEEAGGAATAGRTHASTVAQAAP
+RIRDVDATLASFRTTGVRELDRVLGGGLVPGAVILLAGEPGIGKSTLLLDVAAQTARGAA
+GGGPRDVLYLTGEESAAQVRSRADRIGALADTLRLAAETDLGRALGQIEKTDPALVIVDS
+VQTLQSTEVEGVAGGVTQVREVAASLIRTAKEKGITTILVGHVTKDGSIAGPRLLEHLVD
+VVCQFEGDRHSRLRLVRAVKNRFGPTDEVGCFDLREDGIESLDDPSGLFLSGTQEPVEGT
+CVTVTLEGRRPLVAEVQALLTPSGGGSARRTVSGVDAARVNMLLAVLQRRARFALAQDDC
+YVATVGGVRLSEPASDLAVAVAIASAKLGAPVPQGMIAVGELGLAGEVRPVPGIGRRVRE
+AARLGFTRALVPRSPEPLGDVPAGFSVAQVGTLSEALGTIPSWTGQRSPGARS
+>3_2065
+MATKTAPKRAPGYRCTECGWTTVKWVGRCGECQSWGTVEEIGLTSTTGRTRAATVAEVAP
+RIADVDATLASFRSTGVRELDRVLGGGLVPGAVILLAGEPGIGKSTLLLDVAAQTARGAG
+GGGPRSVLYLTGEESAAQVRSRADRIGAIADTLRLTAETDLGRALGQIERTDPELVIVDS
+VQTLQSTEVDGIAGGVSQVREVAASLIRTAKEKGITTVLVGHVTKDGTIAGPRLLEHLVD
+VVCQFEGDRHSRLRLVRAVKNRFGPTDEVGCFDLREDGIESLDDPSGLFLSGVSEPVEGT
+CVTVTLEGRRPLVAEVQSLLTPSAGGSPRRTVSGVDAARVNMLLAVLQRRARFALAQDDC
+YVATVGGVRLSEPASDLAVAVAVASAKLSAPVPQGMIAVGELGLAGEVRPVPGIGRRVRE
+AARLGFTRALVPRSPEPLGDVPAGFTVAEVGSIGEALATIPTWTGGGPAARPEAGPGR
+>4_96
+MATKTAPKRAPGYRCTECGWTTVKWVGRCGECQSWGTVEEIGLTSTTGRTRAATVAEVAP
+RIADVDATLASFRSTGVRELDRVLGGGLVPGAVILLAGEPGIGKSTLLLDVAAQTARGAG
+GGGPRSVLYLTGEESAAQVRSRADRIGAIADTLRLTAETDLGRALGQIERTDPELVIVDS
+VQTLQSTEVDGIAGGVSQVREVAASLIRTAKEKGITTVLVGHVTKDGTIAGPRLLEHLVD
+VVCQFEGDRHSRLRLVRAVKNRFGPTDEVGCFDLREDGIESLDDPSGLFLSGVSEPVEGT
+CVTVTLEGRRPLVAEVQSLLTPSAGGSPRRTVSGVDAARVNMLLAVLQRRARFALAQDDC
+YVATVGGVRLSEPASDLAVAVAVASAKLSAPVPQGMIAVGELGLAGEVRPVPGIGRRVRE
+AARLGFTRALVPRSPEPLGEVPAGFTVAEVGSIGEALATIPTWTGGGPAARPEVGPGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000062.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000062.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b711fc37e59fa44900d63baad9da6afa7f0ad37a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000062.fa
@@ -0,0 +1,47 @@
+>0_65
+MTQTATPQTDAPAVPAIFEPIEINGVRVRNRLILPPMCQYSCEARDGVPHGWQFQHLGAR
+AAGGFGIVVTEATAVTPEGRISPWDTGLWNDEQRDAWAPIAEFIASEGALPAIQLGHAGA
+KASTVPMHPGAPAGQPILEGPDSWETLSPSGVATNSMEIRTHAMRVDEIRETVQAFADAA
+ERADRAGFGAVQLHAAHGYLIHQFLSPLTNTRTDEYGGDFEGRTRFLKEVVAAVREVWPA
+DKVLGIRISGTDWVEGGWSIEETVRLAQELQGQVHWFDLSSAGIGDTYEGPQGPGYQVPL
+ATAVKEGTEGIVVSAVGSLTGAEEVAAVVDEDRADAVCVGRAALANPNWPTAAALALDVP
+SEQVPMARQYFRAKW
+>1_270
+MTQTATPQTDAPAVPAIFEPIEINGVRVRNRLILPPMCQYSCEARDGVPHGWHFQHLGAR
+AAGGFGIVVAEATAVTPEGRISAWDTGLWNDEQRDAWAPIAEFIASQGALPAIQLGHAGA
+KASTVPMHPGALAGQPILEGPDSWETLSPSGVATNSMEIRTHAMRVDEIRETVQAFADAA
+ERADRAGFGAVQLHAAHGYLIHQFLSPLTNTRTDEYGGDFEGRTRFLKEVVAAVREVWPA
+DKVLGIRISGSDWVEGGWSIEETVRLAQELQGQVHWFDLSSAGIGDTYEGPQGPGYQVPL
+ATAVKEGTEGIVVSAVGSLTGAEEVAAVVDEDRADAVCVGRAALANPNWPTAAALALDVP
+SEQVPMARQYFRAKW
+>2_2291
+MPDLFDPLPLGGLTLPNRVTMAPLTRQRAGEDGVPGDLHVEYYRQRASAGLIVSEGVFPT
+VDSRAFPGQPGLEDEAQQAGWARVADAVHEAGGRIFVQVMHGGRMCHPDLLRGAEPVAPS
+AIAPGVPVRGFSGKTDGPVPRALETEELPGIAAAFASAARRAVDAGADGVEVHGANGYLL
+HEFTAASSNHRTDAYGGSPENRARLTVEVVRAVAAEIGAERTALRLSPEHDVQGVLEQDR
+ADVLATYGAILDGVADLDLAYLSLLHRDVAGDLVAALRARFGGPVLLNSGFSEVTGAAEA
+RRIVEGGLADAAVVGRALIANPDLVRRWREDRETNAPDPSTFYVGGAHGYTDYPSLEG
+>3_190
+MPSLFDPLDVGALRLDNRIVMAPLTRQRAGEDGVPTELPAEHYAQRATAGLLVTEGAFPS
+FRSRAFPGQTGLADDAQTDGWRAVAQAVHEAGGHVFVQVMHGGRMCHPDLLRGAEPEAPS
+AIAPGVPVRGFSGKMEGPVPSALDTEELPRVVAEFADAARRAVEAGLDGVEVHGANGYLL
+HEFLAPSSNTREDAYGGSPENRARLTVEVVRAVAQAIGAERTALRISPEHNVQGTIEEDR
+ADVLATYDALLAGLADLDLAYLSVIHQDVAGDLAAHLRESFSGPLVLNSGFGAVTGLEEA
+RRIVEDGLADAVAVGRELIANPDLARRWREGLPLNEPDPTTFYTGGAHGYTDYPFVDGSP
+SS
+>3_2236
+MTQTATPQTDAPAVPAIFEPIEINGVRVRNRLILPPMCQYSCEARDGVPHGWQFQHLGAR
+AAGGFGIVVAEATAVTPEGRISPWDTGLWNDEQRDAWAPIAEFIASEGALPAIQLGHAGA
+KASTVPMHPGAPAGQPILEGPDSWETLSPSGVATNSMEIRTHAMRVDEIRETVQAFADAA
+ERADRAGFGAVQLHAAHGYLIHQFLSPLTNTRTDEYGGDFEGRTRFLKEVVAAVREVWPA
+DKVLGIRISGSDWVEGGWSIEETVRLAQELQGQVHWFDLSSAGIGDTYEGPQGPGYQVPL
+ATAVKEGTEGIVVSAVGSLTGAEEVAAVVDEDRADAVCVGRAALANPNWPTAAALALDVP
+SEQVPMARQYFRAKW
+>4_269
+MTQTATPQTDAPAVPAIFEPIEINGVRVRNRLILPPMCQYSCEARDGVPHGWQFQHLGAR
+AAGGFGIVVAEATAVTPEGRISPWDTGLWNDEQRDAWAPIAEYIASEGALPAIQLGHAGA
+KASTVPMHPGAPAGQPILEGPDSWETLSPSGVATNSMEIRTHAMRVDEIRETVQAFADAA
+ERADRAGFGAVQLHAAHGYLIHQFLSPLTNTRTDEYGGDFEGRTRFLKEVVAAVREVWPA
+DKVLGIRISGSDWIEGGWSIEETVRLAQELQGHVHWFDLSSAGIGDTYEGPQGPGYQVPL
+ATAVKEGTEGIVVSAVGSLTGAEEVAAVVDEDRADAVCVGRAALANPNWPTAAALALDVP
+SEQVPMARQYFRAKW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000066.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000066.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6f26811f433f09079ba1eeab920c768f0225a344
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000066.fa
@@ -0,0 +1,31 @@
+>0_102
+MHDAGHTDYSAAHIARTADGTAASGAVSAGPGGRRPGPTTPADAGRSRGSRYADRVSEDL
+RILIADDQPLMSGALRVLVSSAPGMTCVGVVANGAEAVEACAAVEPDVVLMDMQMPLMDG
+VEATSRIKEAHPGIRILAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIHAVHRGE
+SVLSPAVASKLLASIERDHPVVGPAQARPGDPDGSDLTDRERDVLRLLARGQSNPEIAAN
+LHVSESTIKSNLTRIMDKLEVRDRVQVIIRAAQLGLVTLSLD
+>1_249
+MSEELRILIADDQPLMSGALRVLVDSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDMQM
+PLMDGMEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQA
+VHRGESVLSPAVATKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNP
+EIAANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQLGLVTLALD
+>2_70
+MPDSPEDEIRVLIADDQPLMSGALRVLVDSAPGMRCVGLVADGVEAVEAVEATRVDVVLM
+DMQMPRMDGVEATRRITASRPGTRVLAVTTFSSEDYLVPALRAGAAGYLLKDAEPATVLG
+AVEAVRRGESVLSPAVAAKLIAAVERDHPVVGPAAAEPGDPDGSDLTEREHQVLTLLARG
+RSNPEIAAELQVSESTVKANVGRVIDKLEVRDRVQVVIRAAQLGLVTLSLD
+>2_509
+MDAITVLIVEDEPLLTQAYTMILEADPGIRVVGTASDGAAGVAEHERLRPDVVLMDLRMP
+VLDGVEATGRIMREHPEAKVLVVTSMTTEDYLSPALANGAAGYLTKDTDAEGLVRAVRAV
+EAGTMALGPSIAREVVDLLLRSGVAPRTDAPASPRDLPEALTPREQDVLELLAEGLTNQE
+MAARLYVSDSTVKSNLARVMHKLGANNRVQALVLGVRAGLVSIPG
+>3_2214
+MSEELRILIADDQPLMSGALRVLVASAPGMTCVGVVANGVEAVEACAAVEPDVVLMDMQM
+PLMDGVEATRRIKEAHPEVRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQA
+VHRGESVLSPAVATKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNP
+EIAANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQLGLVTLALD
+>4_248
+MSEELRILIADDQPLMSGALRVLVDSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDMQM
+PLMDGVEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQA
+VHRGESVLSPAVATKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNP
+EIAANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQLGLVTLALD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000068.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000068.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3bd7312909db5907f3275bbed582932010f99913
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000068.fa
@@ -0,0 +1,54 @@
+>0_120
+MAEFSAAPTAHPAESDTHVSPAQRRKAFVGAIAGHLIEWYDYGVYGFLAVYVAANFFKSE
+NPMVGILAAFAVFALSFFVRPLGGLFFGPLADKIGRRKTLMIVLGLMCGATAVIGMLPTY
+ATIGVFAPILLVLMRLVQGFSAGGEVSTISAFVAEYAVKGRRGFATSFLMVTAASGLLLG
+GVVANGLGAIIGTEAMAEWGWRLPFLLAGVLGVVAVFIRMKLEDSPEFRRLHSEGKTSKT
+PLRETLRYQRQLFLMGALITLLGSTFYLVLTYLTTYMRTILELTPGAIFWLVLLTGAAAA
+AFMPVGGAISDRMGDRRPMLAIGAVLVAGAVVWFFLTAPGTDGGLPLVPSLLALGITTGL
+YCGVPYATMTELMPAHVRSTGIALGYNVPVAVFGGSAPFIASWLINETGDVASPMYFFLL
+TAAIALVGVAMLRPTDLLGHEDVPVTGSIDAVGGKVTRTVAPRPKADAL
+>0_807
+MSHTTVAHGAEHPARTRDRAEERKVLAGTLVGTTIEWYDFFIYAQAAALVFAPLFFAPMG
+EQGAQIASWASLGISFLVRPLGAIVAGHMGDRFGRKLVLSLTLIGMGAATVLIGLLPTYA
+SIGIWAPILLVVFRLLQGFSAGGEWGGAALLSVEHAPRGKRGLFGSAPQIGVPLGMLLAT
+GVLFAVRASMTNEQFLAWGWRIPFLISVILIFIGYIIRKAVEESPVFKEMQQLKKDESAP
+LGELFRNHTKEVVLAALIFAANNAVGYLVIAWFSKYGQKNLGMAPNDTLIAALVGGFGWF
+IFTLFGGWISDKIGRKTAFVAGYALIIAWAFPMFQMMNTASLPMFAAALFILSIGLGPSY
+GPQSAMYAEMFPARVRFSGVSIGYAIGAIIGGAFAPLIADLLLNDGGWVPVAWYMIIISA
+VSLIAVLFVPKGIQDRNLHDEGVVVAETGTREPVA
+>1_1953
+MSHTVASPAAPVPARDRREERKVIAGTVVGTTIEWYDFFIFAQATALVFAALFFQPMGEN
+GSQIAAWVTLGISFLVRPLGAIVAGHLGDRFGRKLVLSLTLIGMGLATTLIGLLPTYAQI
+GVWAPILLVALRLLQGLSAGGEWGGAALLSVEHAPHGKRGLFGSAPQIGVPLGMILATGV
+LFIVRSTMSEEQFLTWGWRIPFLISVILIVVGYLIRKAVEESPVFKEMQQLKVDESAPLG
+ELFRHHTKEVILAAVIFAANNGVGYLLIAWFSKYGGPKGLGMTSSEVLIASLVGGVGWFI
+FTLLGGWVSDKIGRKLTFVFGYGFLIVWAFPLFGLLNTASLPLFSLGLFVLTLGLGPSYG
+PQSAMYAEMFPARVRFSGVSIGYALGTIIGGAFAPLLADQLVKTGWENVAWYIIVISAIS
+LIAVLFVPKGIQDRELHDEQVVATRSNPVVPT
+>2_747
+MSHTVASPAVAAARDPREERKVLAGTLVGTTIEWYDFFIFAQATALVFATLFFQPMGESG
+AQIAAWVTLGISFLVRPLGAIIAGHLGDKFGRKLVLSLTLIGMGAATTLIGLLPTYAQIG
+VWAPILLVLLRLLQGFSAGGEWGGAALLAVEHAPHGKRGLFGSAPQIGVPLGMILATGVL
+FLVRSTMSEEQFLTWGWRIPFLVSVLLIVVGYFIRKAVEESPVFKEMQQLKVDESAPLGE
+LFRHHTKEVILAAVIFAANNGVGYLLIAWFSKYGGPKGLGMTSSEVLIASLVGGVGWFIF
+TLLGGWISDKIGRKTTFVIGYAILIAWAFPMFQLLNTASLLLFSLALFVLTMGLGPSYGP
+QSAMYAEMFPARVRFSGVSIGYAIGTIIGGAFAPLIADELVKSGWPSVAWYIIGISAISL
+IAVLFVPKGIQDRELHDEEVVATRSNPVVPA
+>3_1674
+MSHTVASPAAPAPARDRREERKVIAGTVVGTTIEWYDFFIFAQATALVFAALFFQPMGES
+GSQIAAWATLGISFLIRPLGAIVAGHLGDRFGRKFVLSLTLIGMGLATTLIGLLPTYAQI
+GVWAPILLVALRLLQGLSAGGEWGGAALLSVEHAPHGKRGLFGSAPQIGVPLGMILATGV
+LFIVRSTMSEEQFLTWGWRIPFLISVVLIVVGYLIRKAVEESPVFKEMQQLKVDESAPLG
+ELFRHHTKEVILAAVIFAANNGVGYLLIAWFSKYGGPKGLGMTSSEVLIASLVGGVGWFI
+FTLLGGWVSDKIGRKLTFILGYGFLIIWAFPLFGLLNTASLPLFSLGLFVLTLGLGPSYG
+PQSAMYAEMFPARVRFSGVSIGYALGTIIGGAFAPLLADQLVKTGWENVAWYIIVISAVS
+LIAVLFVPKGIQDRELHDEQVVATRSNPVVPA
+>4_1892
+MSHTVASPAAPVPARDRREERKVIAGTVVGTTIEWYDFFIFAQATALVFAALFFQPMGES
+GSQIAAWVTLGISFLVRPLGAIIAGHLGDRFGRKLVLSLTLIGMGLATTLIGLLPTYAQI
+GVWAPILLVALRLLQGLSAGGEWGGAALLSVEHAPHGKRGLFGSAPQIGVPLGMILATGV
+LFIVRSTMSEEQFLTWGWRIPFLISVALIVVGYLIRKAVEESPVFKEMQQLKVDESAPLG
+ELFRNHTKEVILAAVIFAANNGVGYLLIAWFSKYGGPKGLGMTSSEVLIASLIGGVGWFI
+FTLLGGWISDKIGRKLTFVLGYGFLIVWAFPLFGLLNTASLPLFSLGLFVLTLGLGPSYG
+PQSAMYAEMFPARVRFSGVSIGYALGTIIGGAFAPLLADQLVKTGWENVAWYIIVISAIS
+LIAVLFVPKGIQDRELHDEQVVATRSNPVVPA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000072.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000072.fa
new file mode 100644
index 0000000000000000000000000000000000000000..844fda38c2966f4a66cb85ae758a49fc49259920
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000072.fa
@@ -0,0 +1,31 @@
+>0_153
+MSALAARARAGLAHAVLAVAGARIHASGPDGAEEAEITRERLAALLPRQAVFYANHTSHL
+DFVTLWAVLPPALQRRVRPVAAADYWGSGLRRRVAEGLFHAYLVERGKTRRRGPGAASGS
+GVSPDGGSQLEGMLEILAGGDSLIIFPEGTRGSGEDVARFQRGLHALAAAFPQVPVVPVS
+LVNLGRILPKGEPIPVPHLSTVRFHPPLDPPEPARPPGPGAPASGTAATDAPEPGRGEDE
+AARTAWLERARAVLVQDLSASLRG
+>0_1744
+MATSEPVRRSAAALLRLTCRPEVTGMDQVPAEGPFIMASNHLSFFDSVILQALAPRPVHF
+FAKEEYFTGAGVRGRAQRWFFESVGSVPVRRGEQAASVAALESLVGLLDSGQGVGIYPEG
+TRSRDGRLYRGRTGAAWLALTTGAPVVPVGLVDTQHLQPPDTNGFRPHRFAVRVGAPLDF
+GHPGRRHTLPQRRDATAAIMDAIGALSGQERLDAYNAAPGARG
+>1_1072
+MATSEPVRRSAAALLRLTCRPEVVGMEHVPARGPFVMASNHLSFVDSVILQALAPRPVHF
+FAKEEYFTGTGLRGRVRRRFFESVGSVPVRRGEQAASVAALESLVGLLESGQGVGIYPEG
+TRSRDGRLYRGRTGAAWLALATGARVVPVGLVGTQHLQPPDTNGFRPHRFSVRVGAPLDF
+GHPGRRHTLPQRRDATAAIMDAIGALSGQERVDAYNAAPGARG
+>2_1636
+MATSEQLRRAVAGAIRLSCRPHVRGLEHVPPEGPFIVASNHLSFVDSVILQALCPRPVGF
+FAKAEYFEAPGLRGRAQRRFFEAVGSIPVRRGEQAASVAALEDLVALLDGGHGVGIYPEG
+TRSRDGRLYRGRTGAAWLALTTGAPVVPVGLRGTERLQPPGTNGFRPHRFTVEMGEPLDF
+GHPGRRHSLPQRREATATIMAAIAALSGQERVDEYNAAPAARG
+>3_800
+MATSEPVRRSAAALLRLTCRPEVVGMEHVPARGPFVMASNHLSFVDSVILQALAPRPVHF
+FAKEEYFTGTGLRGRVRRRFFESVGSVPVRRGEQAASVAALESLVGLLESGQGVGIYPEG
+TRSRDGRLYRGRTGAAWLALATGAPVVPVGLVGTQHLQPPDTNGFRPHRFSVRVGAPLDF
+GHPGRRHTLPQRRDATAAIMDAIGALSGQERVDAYNAAPGARG
+>4_1022
+MATSEPVRRSAAALLRLTCRPEVVGMEHVPARGPFVMASNHLSFVDSVILQALAPRPVHF
+FAKEEYFTGTGLRGRVRRRFFESVGSVPVRRGEQAASVAALESLVGLLESGQGVGIYPEG
+TRSRDGRLYRGRTGAAWLALATGAPVVPVGLVGTQHLQPPDTNGFRPHRFSVRVGAPLDF
+GHPGRRHTLPQRRDATAAIMDAIGALSGQERVDAYNAAPGARG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000073.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000073.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c5d49c6fd0f99b7ca04c5316471049557db86a86
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000073.fa
@@ -0,0 +1,17 @@
+>0_157
+MENSLPAERARLGWSQQRLADELGVSRQTVISLEKGRHDPSLALAFRLAETFGTRIEDLF
+SPDPPA
+>0_2156
+MSIDRLAEAAAIHRRTIIQIEAGRTAPRVTTLYAIAEATGTPLRDLLAPLDEALERGTR
+>1_208
+MENTIPDERARLGWSQQRLADELGVSRQTVISLEKGRYDPSLPLAFRLAAVFGRRIEDLF
+TPDGNAG
+>2_307
+MARLARAFKVHKANSGMTYDQLAEATGLARQTLLNLAAGRTYGDLRTWLILAKVWGVTLD
+DLTAAAWRGHAGG
+>3_2152
+MENTIPDERARLGWSQQRLADELGVSRQTVISLEKGRYDPSLPLAFRLAAVFGRRIEDLF
+TPDGNAG
+>4_208
+MENTIPDERARLGWSQQRLADELGVSRQTVISLEKGRYDPSLPLAFRLAAVFGRRIEDLF
+TPDGNAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000079.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000079.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4aa60cc182855f9dd4a623d70c536f7a435e882d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000079.fa
@@ -0,0 +1,37 @@
+>0_187
+MRLIPLVLLSLLCQQLGASVAGLMFGTTGPAGMVALRLAFSALVLLVLTRPRMRTLAGLS
+RRGWVAVVMLGVTMAGMNLLIYAAFDRIPQGVAVTFEVLGPLALSVLANRRWLSVVWAAL
+AFAGIALLGRDGFSAGMDGAGLDPLGVAFALAAAACWAGFILANRHAGTHLPGVQGLALA
+MVVGSAVAVPVGAADAGPVLLEPWVLAVGLGVALLSSSIPYGIEMQVLRTMPTGLFSLIT
+CLSPVVAALTAWAVRGQRLAVLDLGGMGLVVLACGAAVWAAERAARPSRRAPRTS
+>1_190
+MRLVLLVLLSLLSQQLGASVAGLLFDDVGASAMVALRVVFSAAVLLLVTRPSRAALAGLG
+PRGWAAVVGLGAAMTGMNLAIYEAFARIPQGVAVTFEVLGPLALSVAARPSWRSAAWAAL
+ALAGIGVLGREGFSADGGIGGAGLDPVGVALALAAAACWAGYILLSRRAGTHLPGVQGLA
+LATAAGSLVALPVGVATAGAALLSPVVLGVGLAVALLSTAVPYGIDLQVLRRMPTALFSL
+LTCLSPIAAALTAWAVRGQELTPLDLAGMLLVIAACAAAVWTSRSPGVAGGGRG
+>2_139
+MRLVLLVLLSLLSQQLGASVAGLLFDDVGASAMVALRVVFSAAVLLLVTRPSRAALAGLG
+PRGWAAVVGLGAAMTGMNLAIYEAFARIPQGVAVTFEVLGPLALSVAARPSWRSAAWAAL
+ALAGIGVLGREGFSADGGIGGAGLDPVGVALALAAAACWAAYILLSRRAGTHLPGVQGLA
+LATAAGSLVALPVGVATAGAALLSPVVLGVGLAVALLSTAVPYGIDLQVLRRMPTALFSL
+LTCLSPIAAALTAWAVRGQELTPLDLAGMLLVIAACAAAVWTSRSPGVAGGGRG
+>3_1974
+MAVAVYPLAFYTSIHWAGVAIGSVVSLASAPLASGLLERIVEYRRLSRWWMLAAALGGTG
+AALLCLSQLDQEAASSTATLAGVLLGLVAGATYATYSWAAHRLIHDGISRAASMGAVFGA
+GGALLLPVLVLTGAPLIATPQAFAVAAYMALVPMFLGYVLFGYGLTRVPASTATTITLTE
+PAIAAILAVAVVGERLTPVGWTGLGIIAAVLFILALTPTNTTADRHGRTPTSEAIQPALA
+PSPRRHNERTSPRDDAGRGSDVMWVSQTMRCQGATRPSRWEGVRGRFRKPYRLRPVSPDH
+GRATCGERTEIMRPARGLDARSVLAATMET
+>3_2137
+MRLVLLVLLSLLSQQLGASVAGLLFDDVGASAMVALRVVFSAAVLLLVTRPSRAALAGLG
+PRGWAAVVGLGAAMTGMNLAIYEAFARIPQGVAVTFEVLGPLALSVAARPSWRSAAWAAL
+ALAGIGVLGREGFSADGRIGGAGLDPVGVALALAAAACWAAYILLSQRAGTHLPGVQGLA
+LATAAGSLVALPVGVATAGAALLSPVVLGVGLAVALLSTAVPYGIDLQVLRRMPTALFSL
+LTCLSPIAAALTAWAVRGQQLTPLDLAGMLLVIAACAAAVWTSRSPGVSGGARG
+>4_190
+MRLVLLVLLSLLSQQLGASVAGLLFDDVGASAMVALRVVFSAAVLLLVTRPSRAALAGLG
+PRGWAAVVGLGAAMTGMNLAIYEAFARIPQGVAVTFEVLGPLALSVAARPSWRSAAWAAL
+ALVGIGVLGREGFSADGGIGGAGLDPVGVALALAAAACWAAYILLSRRAGTHLPGVQGLA
+LATAAGSLVALPVGVATAGTALLSPVVLGVGLAVALLSTAVPYGIDLQVLRHMPTALFSL
+LTCLSPIAAALTAWAVRGQELTPLDLAGMLLVIAACAAAVWTGRSPGVAGGGRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000085.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000085.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2eb1e04ae76bc7fec52442c5363a90fc6bdcd08c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000085.fa
@@ -0,0 +1,44 @@
+>0_339
+MQQIHDPASRGFASDNYSGVHPEVLAAIAEANGGHQTAYGEDAYTGRLAEVVRGHFGEDA
+QVWPMFNGTGANVVALQSMLPRWGAVICADTAHIHVDEGGAPEKSAGIKLLTVPTPDGKL
+TPELIDVQAWGWGDEHRAQPLVVAITQSTELGTLYTPEEIRAITEHAHARGMTVFLDGAR
+LANAAAALDLPLRAFTTDVGVDVLSLGGTKNGALGAEAVVALNPAATTGMTYLRKSQMQL
+ASKMRFVSAQLLALFDGDLYLRTARHANAMAQRLQDAVAAGIADGSLPGVALTQRAQVNA
+VFATLPAGVADRLRRSFRFYDWDEANGEVRWVCSFDTAEEDVDAFVAALRAELAPAD
+>0_1578
+MSAGAPAAGLRAFASDNYAGVHPDVWAALADVDAHHAPAYGADPHTERLQEAVREAFDAP
+DAVALPVFNGTGANVVALQSMLPPWGAVVAADTSHIHHDEGGAPERMGRTKLFTVPTPDG
+RLTPELVDREAHGWGFVHRAQPAVVEIAQVTELGTVYTPEQVRALADHAHGHGMGLYMDG
+ARLFNAAAALELPLSAFTTHAGVHVVSLGGTKAGALGAEAVVVLRPEAVTLASLVPERDL
+PADAGPRERARLAVEYVRKSSMQLASKMRYVSAQLTALLKGDLGIRLAGHANAMARELAG
+RVAGIDGVEVTRTPEANAVFAVLDPQAADRARVRHPFYDWDAARHEVRWMTSWDTTAADV
+DSFAAALGEALSPGRRR
+>1_45
+MQRIHDPQERGFASDNYSGVHPEVLAAIAEANGGHQVAYGEDVYTARLQEVVAQHFGEDA
+TVWPMFNGTGANVVGLQAMLPRWGAVICADTAHIHVDEGGAPEKSAGIKLLPVATDDGKL
+TPELIAAEAWGWGDEHRAQPLVVYLTQSTELGTVYTPDEVKAITDYAHEHGMRVYMDGAR
+IANAAASLGLPLRAFTTDVGVDVLSLGGTKNGALLAEAVVVLDPDAADGLVYLRKNQMQL
+ASKMRFVSAQLLALFDGDLYLRSARHANAMAARLRAGIEAGVADGSLAGVEFTQATDANA
+VFAVLPEGVADRLRARFRFYDWDAARREVRWVCGFDTTEEDVDAFTAALRAELVPAA
+>2_1473
+MSAARPAGLRAFASDNYAGVHPDVWAAMADADADHAVSYGEDPTSAALQEKVREVFGERA
+FAVPVFTGTAANVLALQALTPPWGSVVTAASSHLIHDEGGAPERLGRTPLVPVPTPDGRL
+TGELAAAHVRRDGFVHASQPAVVEIAQATELGTVYSAAQVREVADAAHAAGAALYMDGAR
+LSNAAAALDLPLRAFTTDAGVDVVSYGGTKNGGLGAEAVIVLNPEAVVAARMVGPADVPG
+GDAADARDRARAALGYLRKQDMQLASKHRYLAAQLLALLTDDLGIALAAQANRMARVLAD
+AVAGLDDVELARAPEANAVFARLDPDVAAEVRLRHPFYDWDAAAHEVRWMTSWDTTDADV
+ESFVDALAAALRARRPR
+>3_2009
+MQRIHDPQERGFASDNYSGVHPEVLAAIAEANGGHQVAYGEDVYTARLQEVVAQHFGEDA
+TVWPMFNGTGANVVGLQAMLPRWGAVICADTAHIHVDEGGAPEKSAGIKLLPVATDDGKL
+TPELIAAEAWGWGDEHRAQPLVVYLTQSTELGTVYTPEEVKAITDYAHEHGMRVYMDGAR
+IANAAASLGLPLRAFTTDVGVDVLSLGGTKNGALLAEAVVVLDPDAADGLVYLRKNQMQL
+ASKMRFVSAQLLALFDGDLYLRSARHANAMAARLRAGIEAGVADGSLAGVEFTQATDANA
+VFAVLPEGVADRLRTRFRFYDWDAARREVRWVCGFDTTEEDVDAFTAALRAELVPAA
+>4_40
+MQRIHDPQERGFASDNYSGVHPEVLAAIAEANGGHQVAYGEDVYTARLQEVVAQHFGKDA
+TAWPMFNGTGANVVGLQTMLPRWGAVICADTAHIHVDEGGAPEKSAGIKLLPVATDDGKL
+TPELIAAEAWGWGDEHRAQPLVVYLTQSTELGTVYTPDEVKAITDYAHEHGMRVYMDGAR
+IANAAASLGLPLRAFTTDVGVDVLSLGGTKNGALLAEAVVVLDPDAADGLVYLRKNQMQL
+ASKMRFISAQLLALFDGDLYLRSARHANAMAARLRAGIEAGVADGSLAGVEFTQATDANA
+VFAVLPEGVADRLRARFRFYDWDAARREVRWVCGFDTTEEDVDAFTAALRAELVPAV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000086.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000086.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1b28c6e1ccfed62877ac9b2432fa15e2ca8d27e8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000086.fa
@@ -0,0 +1,35 @@
+>0_354
+MERGPVVGLLDNLERGLERAVRSAFSAGGPRAVKPVEIASALRQAMDDESFALSEGHTVA
+PNSYVVHFSPADFDRARSWGSTLASELCDEVIRHADSQGYALPGTVRVAFHPDTDVRAGD
+LRVVTGLDDGSLPAPAPHDDGASPATAHGPGATATAPDRLVEDLLGGRTP
+>0_355
+MGRPVTEPSGPALELDGRMLPLDGDDLILGRSAERADLVIPDSSVSREHLRLLTVGSTVT
+LLDLGSRNGVLVNGRRVDGSVTLRDGDVVTVGQTELLFFSGTGGRA
+>1_22
+MERGPVVGLLDNLERGLERAVRSAFSAGGPRAVKPVEIASALRQAMDDESIALSEGHTVA
+PNSYVVHFSPADFERARSWGSTLASELCDEVIRHADSQGYALPGTVRVAFHPDADVRGGD
+LRVVTRLDDGSLTAPAPHDDGASPATAHGPGATAPAPDRLVEDPPAAAPREPSPAPRVGP
+RPAPRRAAAPAAPAAPSHADQPTVVMGRPVTEPAGPALELDGRMLPLDGDDLILGRSAER
+ADLVIPDSSVSREHLRLLTVGSTVTLLDLGSRNGVLVNGRRVDGSVTLRDGDVVTVGQTE
+LLFFGGTGGRA
+>2_338
+MGLLDNLERGLEKAVRSAFSAGGARAVQPVEIASALRHAMDDESFALSEGHTVAPNDFTV
+HFAPADFDRARTWGSTLAGELCDEVIRHAQSQGYTLPGSVRVAFHEDAQVHAGQVEVDAR
+IDDGSSPVPSPPAATSAPAPAAARTADDRGPRPSRAPRHGATAAPAPRRDPSPAPRPAPT
+PARSESARRAPADEQATVVMPRRTSPAPAVPWLEADGVRHPLTHEDMVLGRSSERADVVV
+PDSSVSRQHARLVRVGRSVTLIDLGSRNGVTVNGRRVDGSTVLREGDRITVGQTDLVFHI
+DPADGRPRA
+>3_1991
+MERGPVVGLLDNLERGLERVVRSAFSAGGPRAVKPVEIASALRQAMDDESLALSEGHTVA
+PNSYVVHFSPADFERARSWGSTLASELCDEVIRHADSQGYALPGTVRVAFHPDADVRAGD
+LRVVTRLDDGSLTAPAPHDDGASPATAHGPGASAAAPDRLVEDLPAAAPREPSPAPRVGP
+RPAPRRAAAPAAPAAPAAPAAPAHADQPTVVMGRPVTGPAGPALELDGRMLPLDGDDLIL
+GRSAERADLVIPDSSVSREHLRLLTVGSTVTLLDLGSRNGVLVNGRRVDGSVTLRDGDVV
+TVGQTELLFFGGTGGRA
+>4_22
+MERGPVVGLLDNLERGLERVVRSAFSAGGPRAVKPVEIASALRQAMDDESFALSEGHTVA
+PNSYVVHFSPADFERARSWGSTLASELCDEVIRHADSQGYALPGTVRVAFHPDADVRAGD
+LRVVTRLDDGSLTAPAPHDDGASPATAHGPGASAAAPDRLVEDLPAAAPRKPSPAPRVGP
+RPAPRRAAAPTAPAAPAHADQPTVVMGRPVAEPAGPALELDGRMLPLDGDDLILGRSAER
+ADLVIPDSSVSREHLRLLTVGSTVTLLDLGSRNGVLVNGRRVDGSVTLRDGDVVTVGQTE
+LLFFGGTGGRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000088.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000088.fa
new file mode 100644
index 0000000000000000000000000000000000000000..768e5e5c9fab53b3222f0c936a8fe81ace2759fc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000088.fa
@@ -0,0 +1,36 @@
+>0_383
+MGEYFAQTVQSGALLLAIPLAAIAGIVSFLSPCILPLVPGYLGYVSGLSDPTRPDNRRRV
+MTGVGLFILGFAAVFTLYGAAFGLIGGWLLRWQDLLIRILGVLVILMGLALMGMFTFLQR
+TTTPSFTPRTGLAGAPLLGLGFGLGWTPCMGPTLSAVLALSTTTGGAWRGALLGFVYCLG
+LGIPFVLVARGLGWVSTALGFVRRHMRAFNIAGGTLLVLVGVLMATGIWTVWIYQLQNLA
+GTFTTPV
+>0_2583
+MDVQQLVADGQLLVASVIALAAGLLSFLSPCVLPLVPGYLAYVSASAGAAPGEKPARGRL
+VLGSLLFVAGFTAVLVALLAAAGTVGVWLLEWEQLITRVMGAVVILMGLVFIGAFGFMQR
+TTKLRIKPRTGLLGAPLLGVVFAIGWTPCLGPTLAAIMTLSVQQGSVARSVVLALAYCIG
+LGLPFVLAAFGFGWMTQTMTFFKRHIRTVNLIGGVLLILIGLLMVTGLWSQMMYALQAVI
+GGYVTPL
+>1_585
+MSLGGFFAEMVQSGALLVAMPLAAIAGLVSFLSPCILPLVPGYLGYVSGLADPRRADNRR
+RVMTGVGLFILGFAAVFTFYGAAFGVIGGWLLQWQDALIRALGVFVVLMGLVLIGWLPFL
+QNTRRMSFQPKTGIVGAPLLGVVFGLGWTPCMGPTLSAVLALSTTTGDPWRGALLGFLYC
+LGLGIPFVLVAMGLDWVTRTLGFVRRHIRAFNIIGGILLVLVGVLMVTGIWTLWIYQLQN
+LAGTFTTPV
+>2_2150
+MGEYFAQTVQSGALLLAIPLAAIAGIVSFLSPCILPLVPGYLGYVSGLSDPTRPDNRRRV
+MTGVGLFILGFAAVFTLYGAAFGLIGGWLLRWQDLLIRILGVLVILMGLALMGMLTFLQR
+TTTPSFTPRTGLAGAPLLGLGFGLGWTPCMGPTLSAVLALSTTTGGAWRGALLGFVYCLG
+LGIPFVLVARGLGWVSTALGFVRRHMRAFNIAGGTLLVLVGVLMATGIWTAWIYQLQNLA
+GTFTTPV
+>3_1720
+MSLGGFFAEMVQSGALLVAMPLAVVAGLVSFLSPCILPLVPGYLGYVSGLADPRRADNRR
+RVMTGVGLFIMGFAAVFTLYGAAFGVIGGWLLQWQDALIRALGVFVILMGLVLIGWLPFL
+QNTRRMSFQPRTGIAGAPLLGVVFGLGWTPCMGPTLSAVLALSTTTGDPWRGALLGFLYC
+LGLGIPFVLVAMGLDWVTRTLGFVRRHIRAFNIIGGVLLVLVGVLMVTGIWTLWIYQLQN
+LAGTFTTPV
+>4_1944
+MSIGNYFAETVNSGALLIAAPLAMIAGIVSFLSPCILPLVPGYLGYVSGLSNPTHPDNRR
+RVLTGVGLFILGFAAVFTLYGAAFGTIGHWLVRWQDPMIRVLGVLVIVMGLVMVGKFSLF
+QRTLKPTLAPRTGLAGAPLLGVVFGLGWTPCMGPTLSAVLALSTTTGDPWRGALLGFLYC
+LGLGIPFLLAAAGINWVTTALSYIRRNIRVFNIIGGCLLVLVGVLMVSGLWMLWMYQLQN
+LAGTFTTPV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000090.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000090.fa
new file mode 100644
index 0000000000000000000000000000000000000000..958699b9ab6e6f7992af8a69a09350d490641304
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000090.fa
@@ -0,0 +1,47 @@
+>0_414
+MKTSRRGGLGRGLGALIQSTAEPVDEAPQEADATAEDATAPTAAPAEKKAATSTARRLSK
+ETSEAKTPAPRAASASKSSGGAAKEAPADKKAGSAGRAPAAAKKATPTKKASSSAGEAKA
+NSAAAPAAARKTPDRAAQRPVDVFFSPDPEDAPAARRGTKARPAMPTVKAPTKREAASSS
+GEEAAAGASTAAEGTVSTDIAVLREIPVGDIHPNPRQPREVFDEEHMAELVTSIREVGIL
+QPIVVREVDGPTPYELIMGERRWRATQKAGLDAIPAIVRQTPDQDLLRDALLENLHRSQL
+NALEEAAAYQQLMEDFACTQEELAERIGRSRPQISNTLRLLKLPPLVQRRVAAGTLSAGH
+ARALLGLTDPSDMERLAQRIQAEGLSVRATEEAVAQLQGGLRPGRTPRRTADDARHERLD
+HYATALTSRLDTSVKITLGARKGRIAIDFTTVEDLNRIMDVIQGEKGGRGAAS
+>0_1906
+MVASVKTQGLLQPLVVAPNPTLEGDYTIIAGHRRLDALKRAGRDDAPVIVRTDLDTEEKQ
+VAAMLQENLHRQDLTAVEEADAFAQLSLFEGWDVKRIARETGVAQTRVRSRIKLTYLSEA
+TLASLHDGQVTLERAQALAEFAGSPEEELLEEHLTATATNWDFYLARAKQTRDRRKALSA
+EQKAHEEAGFEVVPMPESLYTPEREWDRQDFESPTAALEAGAVVAFDPDYDAPVYLVKHA
+EQELEKDAAAAERKAEAAERAARNEALERELATAQETVRLWLVDTVFPKAAAGDERILRV
+AARHLAATACEETHFRRAGLAAIFCPDLGAYAPELRTAVAEVLAGKSAQELAVIIAVATR
+WTSTARVHAWRDATREDSSPAVWLAMRQELGRELAAPEQVAFDAAKAGEL
+>1_2244
+MPTVKAPSKRATSATSSRKEPGDSSVESAATEGTVSADIAVLREIPVGDIHPNPRQPREV
+FDEDHMAELVTSIREVGILQPIVVREVDGPTPHELIMGERRWRATQKAGLDTIPAIVRQT
+PDQDLLRDALLENLHRSQLNPLEEAAAYQQLMEDFACTQEELSQRIGRSRPQISNTLRLL
+KLPPLVQRRVAAGTLSAGHARALLGLTDPSDMERLAQRIQSEGLSVRSTEEAVAQLQGGL
+RPGRTPRRSTDDARHERLDHYATALTSRLDTAVKITLGARKGRIAIDFTTVEDLNRIMDL
+IQGGQDGKGKGKKS
+>2_367
+MSTRRGGLGRGLGALIQNTAEIEQPPTREDSSPSAASSNKTTAAPAKRSTRTARTAESSQ
+NGLPASDGATQQDHSSDRAEKTASSGTGSQKTSRSTGSKGAKTPEPTATRSAQEEVPRPA
+DIFFGGGEGTSDEPPESGRHRPTRSARPSMPTVKAPSKPAPKSETEQAAPVRKDEPEGTV
+SADIAVLRELPVGDIHPNPRQPREVFDEDHMAELVASITEVGVLQPIVVREVEGAATPYE
+LIMGERRWRATQRAGLATIPAIVRQTPDQDLLRDALLENLHRSQLNPLEEAAAYQQLMED
+FSCTQEELSQRIGRSRPQISNTLRLLKLPPLVQRRVAAGALTAGHARALLGLTDPAEMER
+LAQRIVSEGLSVRATEDAVAQLQGAVRPAPKSTRSREESTRHERLDYFATALTSRLDTQV
+KITLGARKGKIAIDFASVEDLNRIMDLIQGGGDSTPVKG
+>3_1948
+MPTVKAPSKRATSATSSRKEPGDSSVESAATEGTVSADIAVLREIPVGDIHPNPRQPREV
+FDEDHMAELVTSIREVGILQPIVVREVDGPTPHELIMGERRWRATQKAGLDTIPAIVRQT
+PDQDLLRDALLENLHRSQLNPLEEAAAYQQLMEDFACTQEELSQRIGRSRPQISNTLRLL
+KLPPLVQRRVAAGTLSAGHARALLGLTDPSDMERLAQRIQSEGLSVRSTEEAVAQLQGGL
+RPGRTPRRSTDDARHERLDHYATALTSRLDTAVKITLGARKGRIAIDFTTVEDLNRIMDL
+IQGGQDGKGKGKKS
+>4_2186
+MPTVKAPSKRATSATSSRKEPGDSSVESAATEGTVSADIAVLREIPVGDIHPNPRQPREV
+FDEDHMAELVTSIREVGILQPIVVREVDGPTPYELIMGERRWRATQKAGLDTIPAIVRQT
+PDQDLLRDALLENLHRSQLNPLEEAAAYQQLMEDFACTQEELSQRIGRSRPQISNTLRLL
+KLPPLVQRRVAAGTLSAGHARALLGLTDPSDMERLAQRIQSEGLSVRSTEEAVAQLQGGL
+RPGRTPRRSTDDARHERLDHYATALTSRLDTAVKITLGARKGRIAIDFTTVEDLNRIMDL
+IQGGQDGKGKGKKS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000092.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000092.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d5e1a30127274ac58ac89f604eba4c062f920d83
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000092.fa
@@ -0,0 +1,61 @@
+>0_446
+MANTPGSGALIVGVSKTAELIGTALDREWLRFRLYELTGRALTVDVQEVQVQGARLLVLY
+PPAAVEPIRVEGRIRWRVDDHCAEVDASTWFTRQMYRRQYDWSAETSNVPAGEARPAAVD
+IARAFLYDSGDERGEELAEAETPQLLRRLNVVAEGGMLTNAGVLAFVGRPEPALDYTHHE
+VAGADSSIRVHRGGRSLLEELADVLQAFEARNTVRHVQSGLTIGQLRDIPRLAAREALVN
+GLAHREWGDPGATRVEHIGRTLRVTSPGGFFGGVDPSNIITHPSVSRNPALTQLLADLRV
+AERQGIGVDRMVREMVRVGHPQPGIEEVAGPYVRTTLVGETLDEPWMAWLSQVQPRPLTR
+DVSAVLILRHLVDRVWIDEMTAAALTQVSRAESRSMLERLHTATVGGGTILEAVSGVPDA
+VPQAWRLGEAAAQLLAALDQETGIQRTVPDRRALAADYARARGRISTTELASLVGGHASN
+MGAPLRALETEGFLEPSNASRRGRGFFYRWVGDEPA
+>1_33
+MLDEVLAQLRSTGSETALIEVKSAAGGCPRSVRETLSAFANARGGVVVLGLDDSTFEPTG
+ADAPALRDALAGMAADDMTPPVRGVISIENAEGGHQVVVMEVPEFAPDQKPCYITAAGRY
+QGSYTRSDEGDRRLTAYEIDRLIEGQGQPQHDREPVHGATADDLRPDLVEALTGRLRTVQ
+PRAFGSLTDQECLRRANVLVDADGVLVPTLAGLLACGEYPQGFFPQLSISVVVLPGTTFG
+DTGPHGERFVDNRTCEGPLVDMIADARDVLVRHMSRASVIDGTGRADRLEYPLEVIRELL
+VNAVMHRDYSAGARGTQVQVELYPDRLVVRSPGGFFGPVDPSSFGEPDVSSSRNSVLARL
+LSDLPGSDGRMIAENRGSGIPTVLKVLEAAGMVPPEFHSTLTRVEVDVAHDSLLTAETHE
+WIQGLGQDGLTQWQIQALALARSGRTVRNQTLQGWGAHQADATRELSDLVRRGLTVKLGD
+RRGARYTLNPDYVPPAAETGAGGLSERQQAILRALADGPMKATEVGDAVGTSYRTAMNAL
+NDLIEAGLVEPTAPPRSRRRRYRLTPQEETA
+>1_544
+MDVIQLDQTQLMALLSRAEGHFLDYKRTDVAPGKLTRSLAAFCNSDGGDIYVGIAETDGT
+QSWQGAADPEEFNGHLQAFEEVSPFGADWNAEFITAQNESGYVLRINALKSRQVRSDSSG
+KVYKRVGAQNVPVDSEEGLQTLRRLKGLESFEEETLNVDMEEVTNSTHIIKFLVNDPSPT
+DPELYLKRQQLIRGGKPTVASALLFAELPQAMLPKRCGIKIYRYTSSVAHRDQLYSDPVT
+VEGYLYGQIYEAVDQTIDIINQAQFLDVDGLRQVRYPRETLHEVITNAVLHRDYSIQDDI
+HVRIFENRVEVQSPGRLPGHITLKNILEERLSRNGHLVRNINRFVDPPNKDVGEGLNTAF
+ESMRKFNLKEPIIEELENSVMVTIRHQSLASPEQQIMEYLAEHSQIRNQEARNLVGIESE
+SKMKKILQGLVGTGEIEHVPGTAKRGYAYRARAEAAAQEGNR
+>1_2213
+MNWSSDDLTATLDALRARRGDTTSVEVKRATGGVPSMPETLCAFANMPDGGTVVCGVDEA
+HGEFRVVGVPDVAVLEAGLVAQAREAVTPSPTLLPQVFRLEGKDVLVAHVVPLRLTDRPA
+TVRGQAYLRQSDGDYVMHAHELRMVEVAKLHADERVDYDVKPVTGMSEEDLVPELVTDYV
+AAVRERDRRLRDRTHQEILRQTNVLTAAGEPTLAGLYALGDYPQGRYPGLTVTAAVQVRG
+GEGQARSRNLTDFTGPVPVLLDEVMAWVRQNLGTEHVYRPDGQLERRPELPLAAVRELLG
+NALVHRDLGPDTLGAGKAIQVRLTDRALFIQSPGGLRGVSLTQLESDEHAQAAVNQRLYQ
+IAKKLTTPDGASVIEGEGGGIHEVFRSARQWGLGRPQLIDTGVQFKALLWRPRPEGARPS
+RREPAVEVARTPPVEEVPDVKADAPSSAVPPSSAPTRHEGRVLGALAAGEAVGIRDLEEA
+TMLTARQIRYALRQPLLDGLVEMTGGQGHKDTRYRLVSARGAGD
+>2_410
+MDLGPLLAAGETLDVEFKRRLGKDDLYQAVVCMANGIGGRILVGVDDDGTVVGTTADHGG
+AVDADLLAGRIQNGIEPPLSVDVEVVPWEGKDVAVITVPQAKSSFVGTRKGLFVKRVVGP
+DGRPACMPMTPMDVLRAGFDGVGLDYARAEARGAEWGHLDPTEFDRFRRLAGQSAGDSGL
+AELTDAELLRTLDLLTPDGGISLGAVLVFGTSEALRRWAPTAEVLFQDSRPHGVEANEDL
+LLPLLNAFEEIETRLALRNSITPVEVGLVRVDVPLLAESVRRESIANALVHRDYAEAGPI
+QVTLTGSTFSVASPGGFPRDVSPANILNRSAPRSPALANVFKRAGLVERRGKGVQDMFAS
+QLRAGRGAPDYSRSTHRSVIVDIPLGDEDRELLIFLARRQNEGQRALTLTELRVVHEIKH
+GGPAGAAEAAERLRLPVADVRAAATALVEAGVLESRGNGRAQRYMLTARFYELAEDRAAY
+LRLRPVDRIQQRRLIADYIREYGSITRGKAAELCQIAPTAARAVLKGMTEEGLLELRGER
+RAAHYVLPDS
+>4_2148
+MRRGDTTNVEVKRAAGGVPQLAETLCAFANMPEGGTIILGVDEARGAFNVTGVADVALLE
+AGVAAQAREGVTPSPQIIPQTLQLDERQVLLIHVVPLRTADKPATVQGVAYLRQSDGDYR
+MHEHELRMLEVAKLHADERVDYELKVATGLGEQDLVSSLVDEYVAAVRRKNRRLRDRTSE
+EILRQTSVLTSSGEPTLAGLYALGDFPQGRFPGLTVTAAVQLPGGEGQPRNRNLEDFVGP
+LPDLLRDLMAWVSDNIDTVRRYRRDGHMEEVAELPLTAVRELLANALVHRDLGPSTLGMG
+KGVQVRLTPRNLFIQNPGGLQGLSLTQLQSDDHAQAAVNQRLYQFAKKLTTSDGASLIEG
+EGGGIREVFRAAERQGLPRPQLIDTGVQFKAILWRAADRNARAGVEDAKGASAVETAVPR
+AVPASASPTRHEHAVLAALVRMPDGATLRALTSVTGLTDRQVRYALRLPLDEGIVVMDGG
+QGNRQTAYRLMSDSRRP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000096.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000096.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3dc5883de6e3b929fbe180be67a7f36b3be639f4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000096.fa
@@ -0,0 +1,66 @@
+>0_548
+MDSPASPGAPHPETTRPADVVARLQAALPGRVDVSPPPSRPPARDRSGHRSPAVPLAVVH
+AASVADVQAVCRLAHETRTPLVTRGAGTGLAGGAVAGAGEVVLDVMGMDRILEVSPADRV
+AVVEPGILNGALNAALAEHGLWWAPDPASKDISTVGGNIAMNAGGLLCAKYGVTREAVLG
+LDVVLADGTLMRLGHRTVKGVTGYDLTALMIGSEGTLGVIVGATLSLRPAVRGTQVTLGG
+FFPDVVAGAAAAEAVTGAGHVPALMELMDEVTLAAVRADAGPERGAALPESGAFLLVQAD
+GAGAEEDGAAMADLMRAHGGDVTVTADHAEGEALMALRRTAFPALERLGTPLVEDVAVPR
+SRMAEMFARIRDIEARTGIPIPTTAHAGDGNLHPILLFGAAAQVGGAAEDATSIPADVWE
+AAGELFRAGLELGGTLTGEHGVGLLKRAFLRDELGDAQHALQAKIKAVFDPHGILNPGKV
+FTP
+>1_2123
+MDFSAPLDPTPAAPPAADAPPADVVARLQAELPGRVDVSAAALEAARADRSGHRSPAAPL
+AVVRARTVEDVQAACRIAHGTRTPLVTRGAGTGLAGGAVAGAGEIVLDMTAMDRILEVSP
+ADRVAVVEPGILNGALNAALAEHGLWWAPDPASKDISTVGGNIAMNAGGLLCAKYGVTRE
+AVLGLDVVLADGTLLRLGHRTVKGVTGYDLVALMIGSEGTLGVIVGATLALRPAVRGVPV
+TLGGFFPDVVAGAAAAEAITGAGHVPALMELMDEATLAAVRAHAGPERGAALPESGAFLL
+VQADGAGAEADGEAMAALMRTHGGDVTVTVDPAEGEALMALRRTAFPALERLGTPLVEDV
+AVPRSRMAEMFARIREIEARTGVAIPTTAHAGDGNLHPILLFGAAAQVGGAAEDAASIPA
+DVWEAAGELFRAGLELGGTLTGEHGVGLLKRAFLRDELGDAQHDLQQRIKAVFDPHGILN
+PGKVFTP
+>2_474
+MTCIISVSPDDVLHRLRAALGDAVVTDPAALEPLRADRSGHRSPGAPLAAVRARTVEDVQ
+AACRIAHATGTPLVTRGAGTGLAGGAVAGPGQVVLDLSGMDRILEVAPEDRVAVVEPGVL
+NGALNRALEPHGLWWAPDPASKEISTVGGNIAMNAGGLLCAKYGVTREAVLGLAVVLADG
+TLMRLGHRTVKGVTGYDLTALMIGSEGTLGVIVEATLALRPLPEGAVHTLGAFFPDVAVG
+ARAAAAITGAGHVPAIMELMDEATLAAVRAHVSADDAARLPETGAFLLVQADGPGADEQA
+AAMAELIRSAGGEVTVTADPAEADRLVSLRRTAFPALEALGTPLVEDVAVPRSRMPEMFA
+RIREIEAETGLRIPTSAHAGDGNLHPVVLFGEPSRVGGEDGAQEAIPAEVWAAAGMLFRA
+GLELGGTLTGEHGVGLLKRAFLKEELGEAQHGLQERIKAVFDPRGILNPGIVFTP
+>3_1848
+MDFSAPLAPAAPLAPAPAADAPPADVVARLQAELPGRVDVSAAALQAARADRSGHRSPAA
+PRAVVRARTVEDVQAACRIAHGTRTPLVTRGAGTGLAGGAVAGAGEIVLDMTAMDRILEV
+SPADRVAVVEPGILNGALNAALAEHGLWWAPDPASKDISTVGGNIAMNAGGLLCAKYGVT
+REAVLGLDVVLADGTLLRLGHRTVKGVTGYDLVALMIGSEGTLGVIVGATLALRPAVRGV
+PVTLGGFFPDVVAGAAAAEAITGAGHVPALMELMDEATLAAVRAHAGPERGAALPESGAF
+LLVQADGAGAEADGEAMAALMRAHGGDVTVTVDPAEGEALMALRRTAFPALERLGTPLVE
+DVAVPRSRMAEMFARIREIEARTGVAIPTTAHAGDGNLHPILLFGAAAQVGGAAEDAASI
+PADVWEAAGELFRAGLELGGTLTGEHGVGLLKRAFLRDELGDAQHDLQQRIKAVFDPHGI
+LNPGKVFTP
+>4_158
+MLRSLEDVLTKPGQVSGRALDRHAAAADASHFLLVPEAVVTPTDAAEVGALMRASAAQGV
+SLTFRSGGTSLSGQAVTDSVLVDVRKNFRDIEVLDEGARVRVRPGATVRQVNARLARHGR
+RLGPDPASEAACTIGGVVANNSSGMNCGITENTYQTLESMTLVLPSGTVIDTAAPDADGI
+LRHHEPHLYRGLAQLADRVRSDSASVATVRRQFSMKNTMGYGLNALLDFDTPAQILAHLA
+IGSEGTLGFVAEAVFRTVVRPTHSATALLVFEELQAANEALPALVDSRAATVELLDATSL
+RVGQRLTGTPPIVRDLRVQDHAALLVEYSATTAEQLEELRQHGEALTGRIGLSQPAGFTT
+DADARAALWHLRKGLYASVAGARPQGTTALLEDIVVPVLALGRTCTALTQLFDRYDYRDS
+VIFGHAKDGNVHFMLTDDFADPARLQRYSDFTEDMVDLVLGEGGSLKAEHGTGRVMAPYV
+RRQYGDELYGVMREIKQLCDPGGVLNPGVLLNDDPQAHLRHIKAEPSVAEEVDRCVSCGY
+CEPVCPSRDLTLTPRQRIVTLRAIRSARLAGDEALAQSLEEDYDYAAVQTCAVDGMCQTA
+CPVEINTGDLVKRLRRQETGAVAQAGWNLAAQHWGTASIVAGRALDLAAKLPAAATITAN
+QLVRRIAGADSVPLYSPELPRGGGRRRRPAPVGEPVAVYFPACVSAMFGPAQPGTGAPGA
+AGVQDSVLALAQRAGVELLVPSDIDALCCGTPWSSKGKHTGQETITGRTIAALRRDSDHG
+RLPIVCDASSCTEGLRHALEVEVPPAGQQPLRILDAVEFTAEHLLPRLPEPRRIPSLTLH
+PTCSSTRMGLNPALARVAEAIAEDVQIPDDWGCCAFAGDRGLLHPELTASATARQAEQVQ
+AIDASAHASCNRTCELGMSRATGYPYSHVLELLNQSTIAGG
+>4_2069
+MDSSAPLDPTRAAPPAADAPPADVVARLQAELPGRVDVSAAALEAARADRSGHRSPAAPL
+AVVRARTVEDVQAACRIAHGTRTPLVTRGAGTGLAGGAVAGAGEIVLDMTAMDRILEVSP
+ADRVAVVEPGILNGALNAALAEHGLWWAPDPASKDISTVGGNIAMNAGGLLCAKYGVTRE
+AVLGLDVVLADGTLLRLGHRTVKGVTGYDLVALMIGSEGTLGVIVGATLALRPAVRGVPV
+TLGGFFPDVVAGAAAAEAITGAGHVPALMELMDEATLAAVRAHAGPERGAALPESGAFLL
+VQADGAGAEADGEAMAALMRTHGGDVTVTVDPAEGEALMALRRTAFPALERLGTPLVEDV
+AVPRSRMAEMFARIREIEARTGVAIPTTAHAGDGNLHPILLFGAAAQVGGAAEDAASIPA
+DVWEAAGELFRAGLELGGTLTGEHGVGLLKRAFLRDELGDAQHDLQQRIKAVFDPHGILN
+PGKVFTP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000098.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000098.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1db993d1628ed81f4ee7b37d3374cd601d9a2d10
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000098.fa
@@ -0,0 +1,25 @@
+>0_566
+MSPSPSGSVPSSSSVSAESRGMGAAAPGQAAVPGETGAAAAVETIRVSAVVLARPDRRVL
+TVRKAGTTMFMFPGGKHLPGEDPLDTAVREVAEETGLRLRPDELTRLGAWDTDAANEPGA
+ALHSEVFALWRPVARHETPAPTDEIVELHWMDPAAPAAPAGHQVAPLLVAVLAAVAKNPP
+F
+>1_2107
+MSPSPSDSARTPTVTAGEVIRVSAVVLARPDRRVLTVRKAGTAMFMFPGGKHLPGEAPVD
+TAVREVAEETGLRLRPDELTRLGAWDTAAANEPGAALHSEVFALWRPVARHEVPEPTDEI
+VALHWMDPAAPAAPGGHGVAPLLHPVLAAVAATPPF
+>2_493
+MTAPAARSDEPAEIRVSAVVIARPDRRVLTVRKAGTAVFMFPGGKHEPGETPLETAVRET
+REETGLRIRPDELVHLGAWDTPAANEPGMALHSEVFALWRPMARHEVPAADDEIAELHWM
+DPAAPAAPAGAGVAPLLLPVLARVAAQPLF
+>2_1863
+MAAPDFVLSLREHVGHAPLWLSGVKAVALRAGDREVLLVRRADDGRWTLPAGILEPGEEP
+ADAAVREVAEETGVRCAPRRLAGVGTTAGAVYPNGDRARYLDVVLVLDETGGHAHVADDE
+NLEVGWFSVDGLSDLPPLHARALSWALEDGPARFVAGGDVLP
+>3_1832
+MSPSPSDSSRTPTVAAGEVIRVSAVVLARPDRRVLTVRKAGTAMFMFPGGKHVPGEAPVD
+TAVREVAEETGLRLRPDELTRLGAWDTAAANEPGAALHSEVFALWRPVARHEVPEPTDEI
+VELHWMDPAAPAAPGGHGVAPLLHPVLAAVAAAPPF
+>4_2053
+MSPSPSDSARTPTVAGGEVIRVSAVVLARPDRRVLTVRKAGTAMFMFPGGKHLPGEAAVD
+TAVREVAEETGLRLRPDELTRLGAWDTAAANEPGAALHSEVFALWRPVARHEVPEPTDEI
+VELHWMDPAAPAAPGGHGVAPLLHPVLAAVAAAPPF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000100.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000100.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2842a730482338f7fe0fda5f1f91c945f5e9c16f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000100.fa
@@ -0,0 +1,25 @@
+>0_622
+MERPAPTAEICPVRPEDTDAVVALWERTLPEYGDPTRPQRAPRPSIRRKLDWGDGLFWLA
+VSDEEVVGTVMAGYDGHRGWIYSLAVHPDHRRGGLGTALVAHAEQELARLGCPKVNLQVL
+ATNADGAEFWAATGYQPDPVLGLGKRLGG
+>0_2339
+MTETAPTVPTPPARPQVRPLRPEDHEAVAALTVASYVDGGHIAPGSRYVKTLRDVAGRAA
+RAEVLVAEVDGQVAGSVVLTPLGSPMAETAAPGEYEFRMLAVHPDHHRRGVARTLMAVIE
+ERARALPGIEAIALTTMPTMTDAHRLYEALGYVRVPERDWYLRDVIPDLDPADETGPFLV
+YRLPLA
+>1_530
+MSALVRPLRPEDHEAVAELTLASYVDGGHIAPDDAYVKTLMDVADRAGRAEVLVAEVDGE
+VAGSVVLTPPGSPLAETSGDGEYEFRMLAVHPRFHRRGVGGALLAEIVARARAEEGVDAV
+VLTTMPSMTGAHRMYERAGFVRVPERDWFLADVVPDLDPADETGPFLVYRLALD
+>2_2222
+MSDVTVRALRPEDHEAVAALTLASYTTGGHFEAESDYLETLADVAGRAAVAEVLVAELDG
+QVAGSLVLTPHGSPMAETSVPGEYEFRMLAVDPAVHRRGVATALLAEVVRRARATPGVEA
+IALSTMTSMTDAHRMYERLGFVRVPDRDWRLSDLEPGLDPAEDAGPFLVYRLPLT
+>3_264
+MSALVRPLRPEDHEAVAELTLASYVDGGHIAPDDAYVKTLMDVADRAGRAEVLVAEVDGE
+VAGSVVLTPPGSPLAETSGDGEYEFRMLAVHPRFHRRGVGGALLAEIVARARAEEGVDAV
+VLTTMPSMTGAHRMYERAGFVRVPERDWFLADVVPDLDPADETGPFLVYRLALD
+>4_533
+MSALVRPLRPEDHEAVAELTLASYVDGGHIAPDDAYVKTLMDVADRAGRAEVLVAEVDGE
+VAGSVVLTPPGSPLAETSGDGEYEFRMLAVHPRFHRRGVGGALLAEIVARARAEEGVDAV
+VLTTMPSMTGAHRMYERAGFVRVPERDWFLADVVPDLDPADETGPFLVYRLALD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000105.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000105.fa
new file mode 100644
index 0000000000000000000000000000000000000000..37ea6cc043aee8fc216660f4a6dbfc5cd926aea0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000105.fa
@@ -0,0 +1,25 @@
+>0_718
+MSEPTTLDTHVLQRSAEHLAECYAGVFSPETVERYVFESYATLSRTAKVRTYLASTASHF
+ADNRLRALAQSEGKIASPVPQVLFVCVHNIGRSQIAAALLTHHAGDKVEVRSAGSLPGSE
+VHPLVVQALAERGIDLSGAYPKPLTDDVVRAADYVITMGCGDACPVYPGKRYLDWEIADP
+AAETPDGVRAIVDAIDTRVKALWDELRSAT
+>0_722
+MTAETTPETTKPSVLFVCVHNAGRSQMAAAYLQRLAGGRIEVRSAGSAPADTVNPAAVEA
+MAEEGIDISANQPKVLSEQAVKDSDVVITMGCGDACPFFPGKRYEDWKLDDPAGRGVEGV
+RPIRDEIKTRIQQLITELLPAESTAN
+>0_723
+MTTPESASRPSVLFVCAKNGGKSQMAAALMEHHAAGAVQVHSAGTKPGKSINALSAEVIA
+EAGADMSAGHPKPIDPDLLARVDRVVVLGDEARVEPVDGMAGTIVTWHTDEPSTRGIEGI
+ERMRLVRDDIDARVRTLLTELTGSPAS
+>1_2011
+MTTKRPSVLFVCVKNGGKSQMAAALMRHHAGDAIEVHSAGTRPGTALNAQSTEAIAEVGA
+DMSSAVPQPVTPELLRSVDHVIVIGDEAVIKPVEGMTAPVTTWYTDEPSQRGIEGMERMR
+LVRDDIDIHVRKLLTDLTQPST
+>2_471
+MTSDRPSVMFVCVHNAGRSQMAAAYAQHLSGGAVEVRSAGSAPADQVNPAVVEAMAEEGI
+DLSAERPKVLTPEAVQASDAVITMGCGDACPLYPGKRYEDWVLEDPAGRGVDAVRPIRDE
+IRGRVAGLLRELGVEPVA
+>4_1940
+MTTKRPSVLFVCVKNGGKSQMAAALMRHHAGDAIEVHSAGTRPGTALNAQSTEAIAEVGA
+DMSSAVPQPVTPELLRRVDQVIVIGDEAVIKPVEGMTAPVTTWHTDEPSQRGIEGMERMR
+LVRDDIDTHVRKLLTDLTGTAN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000108.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000108.fa
new file mode 100644
index 0000000000000000000000000000000000000000..808e85de82374c85f130919d57ca72d10abd6214
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000108.fa
@@ -0,0 +1,57 @@
+>0_768
+MDLPQITPLAVAVGLAVAVVGWLLGRLLGAGVAWLFARRGRSPSSARVFGKLVAAGITVL
+SLGAAVTVVFPSVKPVDLLGGIGVISIAAGIAFQTVLGNMFAGMVILARDRFRVGDQIQV
+GEHAGNVVEMGLSSTAVKTFDGRLVLIPNQMLHSQAVTVQTGFSAVRSSLRVDVETGNDL
+ARTREIAVRAMSELPQVLRDPAPQALLASVGVTTVGMDLRFWSGARQMETKEAMDAVIHA
+VLTAFEKNGVATGDDVRVVDAGPELRRILEGPGAPRGQGGPDYPGGLAGPGEPDRAARPG
+SD
+>0_919
+MLLAALSGPASPPVLGSLARLFAGENVPAGVEGNVQDGAAATTAALGVEWGTLLTVLVAF
+AVGATLVYAALQVTRVVLVRRPAFQHGAARLSLPAAVAAGLLASRIWLGVMAEEQTWYRP
+ASFLLLIAVAAAGAWAAWRLVGVIEAGILGRYQETGVEHRRERRIRTQTILIRRILNAVI
+VVVAIAVVLLGVPEVRSLGAGLLASAGVISVIAGLAVQSTLTNVFAGFQLAFTDAIRVGD
+VVDMEGVFGTVEEITLSNVVLKLWDGRRMVYPSSHFTTQPFENWTRVGTEVSGVVELDVD
+WRVPMPALRERLTQLLDSTDLWDGRESSMQVTDAIGGTVRIRAVVSARNSGDLWDLRCLV
+REDLVTFLRSEHPEAIVVQRVVERHPAHDDAVPASEGSDAGARGGDPTGEPGPDGSGVAA
+REPRPRTAALPRVEGGEPRPDTVTTPLTRVDDHAGLYTGSITAVQRNRELHGPGEDAFAE
+RRAQQAKQAAEAATADEAGRRSGAGSHADGLLDDAVTRRRQDDED
+>1_1861
+MVLPVLPALATPPLLTALDRLLAGETVPSGVEGDIQDGAAATTRAFGVEWGTLLTVLMAF
+AIGAAVVYLALQVARVVLVRRPAFQHGAARLSLPAAVAAGLLASRIWLGVMAEEQAWYRP
+ASFLLLIAVAAAGAWAAWRLVGVIEAGILGRYQETGVEHRRERRIRTQTILIRRILNAVI
+VVVVVAVVLLGVPEVRSLGAGLLASAGVISVIAGLAVQSTLTNVFAGFQLAFTDAIRVGD
+VVDMEGVFGTVEEITLSNVVVKLWDGRRVVYPSSHFTTQPFENWTRVGTEVSGVVELDVD
+WRVPMDALRARLAQLLESTDLWDGREHALQVTDATGGVVRIRAVVSARNSGDLWDLRCLV
+REDLVAFLRHEHPEGIVVQRMVVRHPAHDDAAPASEGSDAGARGGDRTGEPGPDGSGVAA
+REPRPRTAPLPRVDGADPRPHTLTTPLTRVGDHSGLYTGSMTAVQRNRELAGPGEEAFAE
+RRAQQAKQAAEAAAADEAGRRSGAGSHADGPLDDAVTRRRQDDED
+>2_855
+MPVPALLPVLAQTASSDAALSDAVLSAADQVVPGSVEQDVQQGASAASAALGVEWATVAA
+VLGAFLAGGLVVLGVFLVARLALFRRDRLKADAARLTVPVSLFAGFLTARVGLEVMAHGQ
+PWFEAAAFVLLLAVAASAAWAAWRVVDVVESGILARYHQPGVNDRRERKIRTQTMLLRRV
+LNAVIVVVALAVVLLAIPQVRSLGAGLLASAGLISVIAGLAVQSTLTNVIAGFQLAFTDS
+IRVGDVVDMQGVFGTVEEITLSNVVVKLWDGRRMVYPSKHFTSEPFENWTRTGAAVAGVV
+EMDVDWRVPMDPLRARLTELLESTDLWDGRENAMQVIDAVGGMVRIRAVVSAKNSGELWD
+LRCLVREDLVGFLRAEYPEGIYTQRLVERRPSDPAPEAHDDPAPDAHDDAAPAAAPAAPA
+PSDRGSSTRAEPTPQTRPMPTVTGSVPLARAGENASLYTGSIRAVERNQEMDGPGEEAYA
+ERRARAAEREDRAARDAGRGGAHAARS
+>3_1568
+MVLPVLPALATPPLLTALDRLLAGETVPSGVEGDIQDGAAATTRAFGVEWGTLLTVLMAF
+AIGAAVVYLALQVARVVLVRRPAFQQGAARLSLPAAVAAGLLASRIWLGVMAEEQTWYRP
+ASFLMLIAVAAAGAWAAWRLVGVIEKGILGRYQETSVEHRRERRIRTQTILIRRILNAVI
+VVVAVAVVLLGVPEVRSLGAGLLASAGVISVIAGLAVQSTLTNVFAGFQLAFTDAIRVGD
+VVDMEGVFGTVEEITLSNVVVKLWDGRRMVYPSSHFTTQPFENWTRVGTEVSGVVELDVD
+WRVPMDALRARLAQLLESTDLWDGREHALQVTDATGGVVRIRAVVSARNSGDLWDLRCLV
+REDLVAFLRHEHPEGIVVQRMVVRHPAHDDAAPASEGSDAGARGGDRTGEPGPDGSGVAA
+REPRPRTAPLPRVDGADPRPHTLTTPLTRVGDHSGLYTGSMTAVQRNRELAGPGEEAFAE
+RRAQQAKQAAEAAAADEAGRRSGAGSHADGPLDDAVTRRRQDDED
+>4_1782
+MVLPVLPALATPPLLTALDRLLAGETVPSGVEGDIQDGAAATTRAFGVEWGTLLTVLMAF
+AIGAAVVYLALQVARVVLVRRPAFQHGAARLSLPAAVAAGLLASRIWLGVMAEEQAWYRP
+ASFLLLIAVAAAGAWAAWRLVGVIEAGILGRYQETGVEHRRERRIRTQTILIRRILNAVI
+VVVVVAVVLLGVPEVRSLGAGLLASAGVISVIAGLAVQSTLTNVFAGFQLAFTDAIRVGD
+VVDMEGVFGTVEEITLSNVVLKLWDGRRMVYPSSHFTTRPFENWTRVGAEVSGVVELDVD
+WRVPMDALRARLTQLLESTDLWDGREHALQVTDATGGIVRIRAVVSARNSGDLWDLRCLV
+REDLVSFLRHEHPEGIVVQRMVVRHPAHGDASPASEGSDAEARGGDRTGEPGPDGSGVAA
+REPRPRTAPLPRVDGADPRPDTLTTPLTRVGDHSGLYTGSMTAVQRNRELAGPGEEAFAE
+RRAQQAKQAAEAAAADEAGRRSGAGSHTDGLLDDAVTRRRQDDED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000112.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000112.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c7079e60da5553492903c271e71d81ca3b408816
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000112.fa
@@ -0,0 +1,30 @@
+>0_853
+MSALLVGVFALQGDVREHVRVLEGLGARTRPVRRAADLTGLDGIVLPGGESSVMDRLAGL
+MGLKEPLADAIGAGLPAYGTCAGIILLAREIQNPAPGQGSLGVLDVTVRRNAFGAQVDSF
+EADLEVPAVSAEPVHAVFIRAPAVLRAGGEVEVLASVPASRLSAAPPELGLDDAAQVPVA
+VRQGRVLATSFHPEVTGDHSFHREFLRGL
+>1_1924
+MSPQKTVGVLALQGDVREHVHVLESLGARTRPVRRPADLEGLDGIVLPGGESSVMDRLAR
+IMGMRDPLIAALRDGLPAYGTCAGLIMLAREIRNPAPDQGGLGVLDVAVRRNAFGAQVDS
+FEEDLDIPAVAAEPVHAVFIRAPAVLQAGEGVEVLASVPASRLSVPAADPGLDGDARLPV
+AVRQGHLLATAFHPEVTGDWSFHRAFLAGL
+>2_790
+MSPQKTVGVFALQGDVREHVHVLESLGARTRPVRRPADLEGLDGIVLPGGESSVMDRLAR
+IMGLKDPLIAALRDGLPAYGTCAGLIMLAREIRNPAPDQGGLGVLDVAVRRNAFGAQVDS
+FEEDLDVPAVAAEPVHAVFIRAPAVVQAGEGVEVLASVPASRLSLPAADPGLDGDARLPV
+AVRQGHLLATAFHPEVTGDWSFHRAFLAGL
+>2_800
+MRAVQKTVGVFALQGDVREHVHVLEALGARTRPVRRPADLAGLDGIVLPGEESSVMDRLA
+RIMGLRDPLAEAVRAGLPVYGTCAGMILLAAGIENPAPGQGSLGVLDVTVRRNAFGSQAD
+SLEADLQVPAVSADPMHAVLIRAPAVVRVGEGVEVLASVPAARAVAASSSTAETDDGAPA
+ADLPVAVRAGNVSATSFHPEVTGDWSFHRAFLAGL
+>3_1629
+MSPQKTVGVFALQGDVREHVHVLEALGARTRPVRRPADLEGLDGIVLPGGESSVMDRLAR
+IMGLKDPLIAALRDGLPAYGTCAGLIMLAREIRNPAPDQGGLGVLDVAVRRNAFGAQVDS
+FEEDLDIPAVAAEPVHAVFIRAPAVLQAGEGVEVLASVPTSRLSVPAADPGLDGDARLPV
+AVRQGHLLATAFHPEVTGDWSFHRAFLAGLRPPRAPRR
+>4_1851
+MSPQKTVGVFALQGDVREHVHVLEALGARTRPVRRPADLEGLDGIVLPGGESSVMDRLAR
+IMGLKDPLIAALRDGLPAYGTCAGLIMLAREIRNPAPDQGGLGVLDVAVRRNAFGAQVDS
+FEEDLDVPAVAAEPVHAVFIRAPAVLQAGEGVEVLASVPASRLSVPAADPGLDGDARLPV
+AVRQGHLLATAFHPEVTGDWSFHRAFLAGL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000116.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000116.fa
new file mode 100644
index 0000000000000000000000000000000000000000..07b017587e3b17ebd99b019bed3e2a00628b0508
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000116.fa
@@ -0,0 +1,35 @@
+>0_995
+MTTTLASQTDLDPMRTPAAAAAHRIAPGTAAPDGSGGTPALSVRDLVLEYPDGERGVLRA
+LDEVSLDLHAGTFTALVGPSGSGKSSLLAVAAGLVPPTSGTVTVAGRELTGLSRTERTGL
+RGREIGVIFQQPNLIPSLTAAEQLELSVHLDRDATRTDRKAARDRAMALLERVDLADQAG
+KRPHQLSGGQRQRVNIVRALMASPALLLVDEPTSALDRERSAAVVDLLGALTRDEGTATL
+MVTHDHEFLAATDRTLTMVDGRLTD
+>0_1037
+MSTTTPVIQLSSVTKTYQRRDLYTDASVTVIPGRAHAIVGPNGSGKSVMMRLMCGFLLPS
+SGSVTIDPRYLDGRRTFPDKFGVVIDKPGMLPHLTGLENLRRLAEIQKKIGDERIREVMQ
+SFGLDPDARQRVHQYSLGMKQKLNLCQAVMEDPEVLVLDEPFNALDADSADALRGRLASF
+VADGGTLVFTSHDSRDVEQLADSVIRLENGRVTQEDASPRT
+>1_1793
+MTTLTAPQADLDALRTPAAAAAHRVAGERPAAAADATPALSVRDLVLEYPDGERGVLRAL
+DEVSLDLLPGTFTAMVGPSGSGKSSLLAVAAGLVTPTSGSVSVAGREMAGLSRKERTALR
+GQEIGVIFQQPNLIPSLTAAEQLELTVHLDRDATRADRRAAKARAMELLERVDLADQAGK
+RPHQLSGGQRQRVNIVRALMASPTLLLVDEPTSALDRERSAAVVDLLGTLTREEQVATLM
+VTHDHEFLSVTDRTLTMVDGRLSAE
+>2_938
+MTISTHTPDLSAYRSPAAARVTAHDAAPAAPDAAPVLSVRDLVLEYPDGEGRTLRALDGV
+SLDLTPGTFTAMIGPSGSGKSSLLAVAAGLIAPTSGSVTVAGTELTGLSRAARTRLRGDR
+IGVVFQQPNLLPSLTAREQLELVVRLDPKSTRADRTAAAARAQELLERVDLGRRADQRPH
+QLSGGQRQRVNIVRALMGTGSGAPALLLVDEPTSALDRERSAAVVELLGELTRQEGVATL
+MVTHDHEFLGATDRVLTMVDGRLAA
+>3_1500
+MTALTAPQADLDALRTPAAAAAHRVAAERPATAADATPALSVRDLVLEYPDGERGVLRAL
+DEVSLDLLPGTFTAMVGPSGSGKSSLLAVAAGLVTPTSGSVSVAGREMAGLSRKERTALR
+GQEIGMIFQQPNLIPSLTAAEQLELTVHLDRDATRADRKAARARALELLERVDLADQARK
+RPHQLSGGQRQRVNIVRALMASPTLLLVDEPTSALDRERSAAVVDLLGTLTREEQVATLM
+VTHDHEFLSATDRTLTMVDGRLHAE
+>4_1714
+MTTLTAPQADLDALRTPAAAAAHRVAGERPAAAADATPALSVRDLVLEYPDGERGVLRAL
+DEVSLDLLPGTFTAMVGPSGSGKSSLLAVAAGLVTPTSGCVSVAGREMAGLSRKERTALR
+GQEIGMIFQQPNLIPSLTAAEQLELTVHLDRDATRADRRAAKARALELLERVDLADQAGK
+RPHQLSGGQRQRVNIVRALMASPTLLLVDEPTSALDRERSAAVVDLLGTLTREEQVATLM
+VTHDHEFLSATDRTLTMVDGRLSAE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000117.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000117.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d2c2649b6e7bf40e33ba4b9bbbcffcb238f924af
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000117.fa
@@ -0,0 +1,71 @@
+>0_1003
+MSPRRRTGSTAAPETSTLSVVDPAAARDLRVLGVRAEETLEYTPEERRHVRRRSWALLRQ
+LAGPAKGMLWLTVVLVVVSNAARAAVPLVIAWAIDWGLPQVVEAVRTGADAWGVVVLVGG
+AYALTGVTGGVLLGLYQWLTARASQRMLLALRVRVFRHTQRLSLGFHEKYTSGRVISRQT
+SDLEALRELLDQGVSSLVSGVLFMAFTAVSIVLLDPPSALVLLVAFIPVAVAVRWYQKRS
+EEAYRRSRVSSARAIVHFVETMTGIRAVQAFRRQRANEAKYTRLATDYRDDMVHTLTLFG
+VLQPVLVVTGNLTVAALLVFGGLRVLSGDLEVGVLVALVLAGRRVFQPMEMVAMFYSSFQ
+SAGAALEKVSGLLEEEPAVVEAPEPTPLPGAAAAGEGVASGRIEFRDAVFGYGPEKVVLP
+EFDLTVPAGQTVAVVGQTGAGKSTLVKLIARFYDLTSGSLTLDGVELKELASADLRRNVV
+MVTQEAFLFSGTVAENIALGRPGASEAEIQAAARAVGAHEFILDLPEGYDTDVSKRGGRL
+SAGQRQLVSFARAFLADPAVLILDEATSSLDLPSERLVQDGLERLLGNRTALIIAHRLST
+VEIADRVLVVHDGRVVEDGSPAELVAAGGRFAALHRAWEDSLVPDDA
+>0_1306
+MPALFVGRRRLLLLGLAGLGLLQAALSVAVAVLTPRLLTAGAGAWGLAAALLVAALLVGG
+ARILERVAAEDLGQDYVRETRRLLVTSALVPEKSLNLGSTIARTTNDLTAVKNWIALGIS
+PIVVGVPLIVGIVIGLFVLLPTLGLVVVVTLGVFFTGLWALSRVFFRRAVAVRRVRGKMA
+GYVADTVTAAGSIRTAGGVQREVGRVDRISGQLQDAAHRRAVVSGTMRGSAASITTVLGV
+LVAITGSAAGSTGAAITTAVFIAGMLGAPVTELGRVGEYRQNYNAACRVLRPIIENARGH
+ARRERRQKRARTRMRHHGNPRGLSRDAVHLADLRDAEGTIPALVAAPGSRVLLTGGSRER
+LERVTREITGDMPASDAWITVAGRHLYAMTAKDRRELIGVAARDVPLQRGTISRIVRYRH
+RGAGETVAQVLDRVGMAERVARLPEGDATRLKRGGEPLSINERALLKIAGAVAGNPPLLV
+LDHVDDQLDARDRPILRRILADYPGCVILRSASPHELLERYEVYNVDELAPTLVVAPSVL
+HSRIQGERPTTYVIGADRDPFGPPVRHSAVELAGTRAASAPRLGESADDLEGVDE
+>1_1785
+MSAADVSRVRGVGAEEDLDYTRAERRHIRRRSFRLLGELARPVRGTLLVTVVFVLVSNAA
+RAAGPLIIAWAIDAELPRVVEAVRAGESVWPILVPVGGAYVAAALVSGGLLGAYTWLTAR
+ASQAMLLSLRLRVFRHTQRLSLGFHERYTSGRVISRQTSDLEALRELLDQGVSSLVSGLM
+FMSFTAASILLLDPPSFLVLLGAAVPVAIVTRWYQVRSEEAYRRSRVSSARSIVHFVETM
+TGIRAVQAFRRERDNDARYRDLATAYRDDMVATLNLFGILQPVLVATGNLTVAALLVTGG
+LRVLDGDLEVGVLVALLLAGRRVFQPMEMVAMFYSSLQSATAALEKVSGLLEEEPTVVEA
+AEPTPLPGADAPGTGVASGRVEFRDAVFSYGPDRVVLPEFDLVIPAGQTVAVVGQTGAGK
+STLAKLIARFYDVSAGSLTLDGVELRELSQADLRRNVVMVTQEAFLFSGSIAENIALGRP
+DATEAEIQAAARAVGAHDFILGLPEGYATDVAKRGGRLSAGQRQLVSFARAFLADPAVLI
+LDEATSSLDLPSERLVQAGLERLLGNRTALIIAHRLSTVETADRVLVMHDGRIVEDGSPA
+ELVAADGRFAALHRAWEDSLA
+>2_945
+MSRRADTAPVTSTLTVVDPAEAAGLRVLGVGAEESLDYTPAERRHVRRRSWALLRQLARP
+VRGMLWLTAALVVLSNAARAAMPLVIAWSIDDALPRALEAVRAGTDPTGVVVQTGALYAV
+TGLVGGVLLGLYQWLTAKASQRMLLALRVRVFRHTQRLSLGFHETYTSGRVISRQTSDLE
+ALRELLDQGVSSLVSGVLFTAFTAVSILLLDPPSFLVILVAFVPVAIAVRWYQVRSEEAY
+RRSRVSSARSIVHFVETMTGIRAVQAFRRQRAGERAYARLATDYRDDMMHTLNLFGVLQP
+VLVAVGNLTVAALLLFGGLRVLSGDLAVGVLVALLLAGRRVFQPMEMVAMFYSSLQSATA
+ALEKVSGLLEEEPAVVEPAHPVALPGAERPGEGVASGRIEFRDAVFGYGSDAVVLPGFDL
+TVPAGQTVAVVGQTGAGKSTLVKLIARFYDLTSGSLTLDGVELKDLAGADLRRNVVMVTQ
+EAFLFSGTVGENIALGRPDASEAEIQAAARAVGAHEFILDLPEGYATDVSKRGGRLSAGQ
+RQLVSFARAFLADPAVLILDEATSSLDLPSERLVQDGLERLLGNRTALIIAHRLSTVEIA
+DRVLVVHDGRIVEDGSPTELVAAGGRFAALHRAWEDSLVGEG
+>3_1493
+MSAADVSRVRGVGAEEDLDYTRAERRHIRRRSFRLLGELARPVRGTLLVTVVFVLVSNAA
+RAAGPLIIAWAIDAELPRVVEAVRAGESVWPILVPVGGAYVAAALVSGGLLGAYTWLTAR
+ASQAMLLSLRLRVFRHTQRLSLGFHERYTSGRVISRQTSDLEALRELLDQGVSSLVSGLM
+FMSFTAASILLLDPPSFLVLLGAAVPVAIVTRWYQVRSEEAYRRSRVSSARSIVHFVETM
+TGIRAVQAFRRERDNDARYRDLATAYRDDMVATLNLFGILQPVLVATGNLTVAALLVTGG
+LRVLDGDLEVGVLVALLLAGRRVFQPMEMVAMFYSSLQSATAALEKVSGLLEEEPTVVEA
+AEPTPLPGADAPGTGVASGRVEFRDAVFSYGPDRVVLPEFDLVIPAGQTVAVVGQTGAGK
+STLAKLIARFYDVSAGSLTLDGVELRELSQADLRRNVVMVTQEAFLFSGSIAENIALGRP
+DATEAEIQAAARAVGAHDFILGLPEGYATDVAKRGGRLSAGQRQLVSFARAFLADPAVLI
+LDEATSSLDLPSERLVQAGLERLLGNRTALIIAHRLSTVETADRVLVMHDGRIVEDGSPA
+ELVAADGRFAALHRAWEDSLA
+>4_1707
+MSAADVSRVRGVGAEEDLDYTRAERRHIRRRSFRLLGELARPVRGTLLLTVVFVLVSNAA
+RAAGPLIIAWAIDAELPRVVEAVRAGESVWPILVPVGGAYVAAALVSGGLLGAYTWLTAR
+ASQAMLLSLRLRVFRHTQRLSLGFHERYTSGRVISRQTSDLEALRELLDQGLSSLVSGLM
+FMSFTAASILLLDPPSFLVLLGAAVPVAIVTRWYQVRSEEAYRRSRVSSARSIVHFVETM
+TGIRAVQAFRRERDNDARYRDLATAYRDDMVATLNLFGILQPVLVATGNLTVAALLVTGG
+LRVLDGDLEVGVLVALLLAGRRVFQPMEMVAMFYSSLQSATAALEKVSGLLEEEPTVVEA
+AEPTPLPGADAPGTGVASGRVEFRDAVFSYGPDRVVLPEFDLVIPAGQTVAVVGQTGAGK
+STLAKLIARFYDVSAGSLTLDGVELRELSQADLRRNVVMVTQEAFLFSGSIAENIALGRP
+DATEAEIQAAARAVGAHDFILGLPEGYATDVAKRGGRLSAGQRQLVSFARAFLADPAVLI
+LDEATSSLDLPSERLVQAGLERLLGNRTALIIAHRLSTVETADRVLVMHDGRIIEDGSPA
+ELVAADGRFAALHRAWEDSLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000121.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000121.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6480a549ef88bc0dcba00bf63f626e7f956aafa0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000121.fa
@@ -0,0 +1,44 @@
+>0_1077
+MRVRFRGTDARQALLLRGPAGWAEFSPFPEYGPAESSAWLAAAIEAGWQGWPAPVRDVVP
+VNATVPAVEAEAVESVLARYGEGITAVKVKVAEHRPGGGLVPGSHSADLARVRRVRELLP
+DAHVRIDANAGWTPAEAIAMLTDLADVGLEYAEQPVPGIKKLARVRRELRARGVSTPIAA
+DEAVRKAEDPLAVAAAGAADLIVVKVQPLGGVRRAAAVVAAAGLPAVVSSALDTSVGIAG
+GAALATHLPALPHACGLGTAALFDDDVVTPAWTPRQGVLEAPGERAPEPDPALLARVRAD
+ERTHAWWRDRVAAAHAVLAAGGR
+>1_1721
+MSTAPALPPLPGAPGGPALPSVEELLADAVAVAVPMRVRFRGTDLRHALLLRGPAGWGEF
+SPFPEYGPHESAAWLAAAIEAGWQGWPAPVRETIPVNATVPAVDADDVEAVLARYGDGIT
+AVKVKVAEHGPEGGLVPGGREADLARVRRVRALLPHAQVRVDANAGWTPAEAVDVLTELA
+DVGLEYAEQPVPGITDLAEVRAELRARGVPTPIAADEAVRKAEDPLAVAAAGAADLIVVK
+VQPLGGVRRAAAIVAAAGLPAVVSSALDTSVGIAGGAALAACLPSLPHACGLGTAALFEH
+DVVAPAWRPRAGALPAPGERAPAPDPELLDRIRADGTRQAWWADRVRAAHAVLAAQG
+>2_1002
+MTVPAAHDDADPRPGSALPPLPGAPGGPALPDVDELLEHAVAVTLPMTVRFRGTTERRAL
+LLRGPAGWAEFSPFPEYGPAEASRWLAAAVEAGWQGWPAPVRSEVPVNATVPAVDAADVE
+SVLARYGDGITAVKVKVAEHRPGGGLVDPTHAADVARVRRVRELLPEAAVRIDANAGWDE
+DRAFAVLGALQDVGLEYAEQPVPGIAGLAALRSRLRAAGIATPIAADEAVRKETDPLAVA
+QAGAADLIVVKVQPLGGVRRAAAIVAAAGLDAVVSSALDTSVGIAGGAALAAHLPSLPFA
+CGLGTASLFAHDVVSPAWRPADGSLPAPGERAPEPDPALLAAARADAAEHAWWAERLRAA
+HAVLAARGR
+>2_1768
+MSPAPGQAPVSVAAVRRHRHRAPLLHPFVTAARRTEAVEYVVVEVELSDGTVGQGSAAET
+VAVTGEDAASIETAVDGVFGPALTGATGGLDGLLARLPAPARGATSARSAVDVAVHDAVA
+RAAGVPLTALLAPAGTAVKQTLENDMTVSLEDPATMAARAAEAVAAGTRILKIKLGRDVA
+EDRRRLHAVLEAAPQARLRLDANQGWSVEDAIAIISGMEDEGLPVDLVEQPVAAADVAGL
+ARVRAAVTTPIMADEALWSSEDARRLIEAGAADLFNVKLAKTGGLADAVAIADLAAEHGI
+GCMVGSMMEPRISIAAAVQLSLAHPAVTMVDLDAPLWFASDAPAGGYTQEGADLRLLPGE
+GLALERLDPGTDPV
+>3_1438
+MSTAPALPPLPGAPGGPALPSVEELLADAVAVALPMRVRFRGTDLRHALLLRGPAGWAEF
+SPFPEYGPHECAAWLAAAIEAGWQGWPGPVRQTVPVNATVPAVAADDVEAVLARYGDGIT
+AVKVKVAEHGPEGGLVPGGREADLARVRRVRALLPHAQVRVDANAGWTPAEAVDVLTALA
+DVGLEYAEQPVPGITALAEVRAELRARGVPTPIAADEAVRKAEDPLAVAAAGAADLIVVK
+VQPLGGVRRAAAIVAAAGLPAVVSSALDTSVGIAGGAALAACLPSLPHACGLGTAALFEH
+DVVAPAWRPRAGALPAPGERAPAPDPELLDRIRADGTRQAWWADRLRAAHAVLAAQG
+>4_1650
+MSTAPALPPLPGAPGGPALPSIEELLADAVAVALPMRVRFRGTDLRHALLLRGPAGWAEF
+SPFPEYGPHESAAWLAAAIEAGWQGWPAPVRQAVPVNATVPAVDAADVEAVLARYGDGIT
+AVKVKVAEHGPEGELVPGSREADLARVRRVRALLPHAQVRVDANAGWTPTEAVDVLTALA
+DVGLEYAEQPVPGITDLAEVRAELRARGVPTPIAADEAVRKAEDPLAVAAAGAADLIVVK
+VQPLGGVRRAAAIVAAAGLPAVVSSALDTSVGIAGGAALAACLPSLPHACGLGTAALFEH
+DVVAPAWRPRAGALPAPGERASAPDPELLDRVRADGARQAWWADRVRAAHAVLAAQG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000124.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000124.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9f83aecfb8cbb7a84d9fe995323b7b9c5e9d4538
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000124.fa
@@ -0,0 +1,48 @@
+>0_1193
+MTRRLLLFANSFPYGKQEPYLMRECHYLDAFDEVYIFSLSIRKHQRDHRRDLPLERVTVV
+PIPFKSPLFYAAVSPRALVSRAFVTELRQLLRDRRFTVARAVQALSQFSRAEHEASVIGR
+FLRDNITPSPSDETVFYAYRFLYQPYLMSRLAAKFSSSRLIGRAHGIDLFEERQSTDYLP
+GRAINLGALDELHSVSRAGAEYLRARHPEFVEKIKVSYLGTEDHGVRPPRSSSQVLRLVS
+CSEVAPVKRLELLVEALREVSDSIQVEWSHYGEGPDMDRVRAMASTLPGHVSATFHGWTR
+NDEILEAYRSGRHDVFINVSSSEGLPVSIMESSSCGLPTIATDVGGTGEIVSDGVNGRLI
+SANPMPREIAAAVEEFARMAPEAFARRSAAARETWSTHFDSDRNYRQFVAKMLS
+>0_2388
+MTPEAATTTPAPLTLWVVPVADLGGVARHVLDVAAHGLPGLRLVVLCPEGALAERLREQG
+AAVFTGDVGPDAGLAASVRTLRTAVRTLRPAAVHTHLAYADLAAFTAFGPGRARRRAGAP
+ALVSTEHGIAPDDGLYNRAAAARVKNAAHRARLRGTDLVIAVAQSTADVLRRKWGTGAPI
+TVVRNGVDVSAVRAAAAGQRRAPGEGLRILSLSRLAPEKNLDRLIAALPALLERDPGTRL
+TLAGVGPLEGQLRAQAEALGVADAVDLPGFVEPWGAMAEHDVLVQLSAWENLSYTLLDAA
+AAGLPAVATDVGGNGEILPPERLVHETTPAAIADAVMRATVEGPGEVRVGDVETMARATA
+EATLEVLGRRAGKTSG
+>1_486
+MIPEAARTTPAPLTLWVVPVADLGGVARHVLDVARVGLPGLRLAVLCPEGPLAERLREQG
+AAVFTGDVGPDAGLAASVRTLRTAVRTLRPAAVHTHLAYADLAAFAALGPGRARQRAGAP
+ALLSTEHGIAPDDGLYNRAAAARVKNAAHRARLRGTDLVIAVAQSTADVLRRKWGAGAPI
+TVVRNGVDVPAVRAAAAGQRRTPGEGLRILSLSRLAPEKNLDRLIAALPALLERDPGTRL
+TLAGAGPLEGELRAQAEALGVAEAVDLPGFVEPWETMAEHDVLVQLSAWENLSYTLLDAA
+AAGLPAVATDVGGNGEILPPERLVHETTPAAIADAVVRAAADGPGEVRVGDVETMARATA
+EATLEVLGRRVGKVGTR
+>2_2271
+MIPEAATTTPAPLTLWVVPVADLGGVARHVLDVARVGLPGLRLAVLCPEGPLAERLREQG
+AAVFTGDVGPDAGLAASVRTLRTAVRTLRPAAVHTHLAYADLAAFTALGPGRARRRAGAP
+ALLSTEHGIAPDDGLYNRAAAARVKNAAHRARLRGTDLVIAVAQSTADVLRRKWGAGAPL
+TVVRNGVDVSAVRAAAAGQRRAPGEGLRILSLSRLAPEKGLDRLIAALPALRERDPGTRL
+TLAGSGPLEGQLRAQAEDLGVADAVDLPGFVEPWETMAEHDVLVQLSAWENLSYTLLDAA
+AAGLPAVATDVGGNGEILPPERLVHETTPAAIADAVTRAAAEGPGEVRVDDVEGMAEATA
+RAERDVVETQDARRRKTR
+>3_215
+MIPEDATTTPAPLTLWVVPVADLGGVARHVLDVARVGLPGLRLAVLCPEGPLAERLREQG
+AAVFTGDVGPDAGLAASVRTLRTAVRTLCPAAVHTHLAYADLAAFTALGAGRALRRAGAP
+ALLSTEHGIAPDDGLYNRAAAARVKNAAHRARLRGTDLVIAVAQSTADVLRRKWGAGAPL
+TVVRNGVDVPAVRAAAAGRRRAPGEGLRILSLSRLAPEKNLDRLIAALPALLERDPGTRV
+TLAGSGPLEGQLRAQAEDLGVADAVHLPGFVEPWGTMAEHDVLVQLSAWENLSYTLLDAA
+AAGLPAVATDVGGNGEILPPERLVRETTPEAIADAVVRAAAEGPGEVRVGDVETMARATA
+EATLEVLGRRVGKGGHR
+>4_485
+MIPEAARTALAPLTLWVVPVADLGGVARHVLDVARVGLPGLRLAVLCPEGPLAERLREQG
+AAVFTGDVGPDAGLAASVRTLRTAVRTLRPAAVHTHLAYADLAAFAALGPGRARRRTSAP
+ALLSTEHGIAPDDGLYNRAAAARVKNAAHRARLRGTDLVIAVAQSTADVLRRKWGAGAPI
+TVVRNGVDVPAVRAAAAGQRRTPGEGLRILSLSRLAPEKNLDRLIAALPALLERDPGTRL
+TLAGSGPLEGQLRAQAEALGVAEAVDLPGFVEPWETMAEHDVLAQLSAWENLSYTLLDAA
+AAGLPAVATDVGGNGEILPPERLVRETTPAAIADAVVRAAADGPGEVLVGDVETMARATA
+EATLEVLGRRVGKAGTR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000127.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000127.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9c53d5b1c03c1fb602d98859fffa55573f5e1e6e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000127.fa
@@ -0,0 +1,30 @@
+>0_1227
+MIPVLLIEDEERIAAFVTKGMAAEGIAVTTAGTGAEGVGLAMTGAFELVILDLGLPDADG
+FDVLARIRRQDAHLPVIILTARSSAQDTVEGLTSGADDYMPKPFRFAELLARVRLRLRPG
+APAPEPTDTVMRHGDLELDPASHTARVDGRTVALSAREFALAEEFLRSPGQVLSREQLLD
+GAWGEDFESGSNVVDVYVRYLRAKIGAERILTVRGLGYRLAGEDELSG
+>0_2545
+MQSQNPEARLLVVDDEPNIRELLSTSLRYAGFEVTAAANGREALDAAEEFQPDLAVLDVM
+LPDMDGFTVTRRLRAAGRHFPVVFLTARDGTEDKITGLTVGGDDYVTKPFSLDEVVARIR
+AVLRRTASLDDDAAVLRVGDLELDDDAHEVRRGGEVVELSPTEFKLLRYLMMNPNRVLSK
+AQILDHVWEYDFNGDASIVESYISYLRRKIDVGGREKMIHTKRGVGYMLRAADKR
+>1_339
+MQPQNPEARLLVVDDEPNIRELLSTSLRYAGFEVTAAANGREALDAAEEFQPDLAVLDVM
+LPDMDGFTVTRRLRAAGRHFPVVFLTARDGTEDKITGLTVGGDDYVTKPFSLDEVVARIR
+AVLRRTASLDDDAAVLRVDDLELDDDAHEVRRGGEVVELSPTEFKLLRYLMMNPNRVLSK
+AQILDHVWEYDFNGDASIVESYISYLRRKIDVGGREKMIHTKRGVGYMLRTADKR
+>2_2404
+MQSQTPEARLLVVDDEPNIRELLSTSLRFAGFEVRAAGNGREALEAAEEFQPDLAVLDVM
+LPDMDGFTVTRRLRAAGRLFPVVFLTARDGTEDKVTGLTVGGDDYVTKPFSLDEVVARIR
+AVLRRTAPLDDDSAVLRVDDLELDDDAHEVRRGGEVVDLSPTEFKLLRYLMMNPNRVLSK
+AQILDHVWEYDFNGDASIVESYISYLRRKIDVGGRDKMIHTKRGVGYMFRTADKR
+>3_64
+MQPQNPEARLLVVDDEPNIRELLSTSLRYAGFEVTAAANGREALDAAEEFQPDLAVLDVM
+LPDMDGFTVTRRLRSAGRHFPVVFLTARDGTEDKITGLTVGGDDYVTKPFSLDEVVARIR
+AVLRRTASLDDDAAVLRVDDLELDDDAHEVRRGGEVVDLSPTEFKLLRYLMMNPNRVLSK
+AQILDHVWEYDFNGDASIVESYISYLRRKIDVGGREKMIHTKRGVGYMLRTADKR
+>4_346
+MQPQNPEARLLVVDDEPNIRELLSTSLRYAGFEVTAAANGREALDAAEEFQPDLAVLDVM
+LPDMDGFTVTRRLRSAGRHFPVVFLTARDGTEDKITGLTVGGDDYVTKPFSLDEVVARIR
+AVLRRTASLDDDDAAVLRVDDLELDDDAHEVRRGGEVVELSPTEFKLLRYLMMNPNRVLS
+KAQILDHVWEYDFNGDASIVESYISYLRRKIDVGGREKMIHTKRGVGYMLRTADKR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000129.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000129.fa
new file mode 100644
index 0000000000000000000000000000000000000000..dcc6248de7a119db4819eaece69f8f409c1dab93
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000129.fa
@@ -0,0 +1,52 @@
+>0_1248
+MALTIGFVGLPNVGKSTLFNALTRQTVLAANYPFATIEPNVGVVNLPDERLPQLAEIFGS
+ERILPATVSFVDIAGIVKGASEGEGLGNQFLANIREAHAIAQVVRAFDDGDVVHVDGKVD
+PASDMETINTELIIADMQTVEKAIPRVEKEVKGKKKEPADLEALKAALAVLERGETIFAA
+KDKDKLDMDRLRELSLLTAKPFIYVFNSDEGVLGDEAKQQELRDLVAPADAVFLDAKLES
+DLVELSEEEAAEMLEMAGQNESGLDQLARVGFSTLGLQTYLTAGPKETRAWTIPVGATAP
+EAAGVIHTDFQRGFIKAEIVSFEDLIAAGSMADAKAAGKVRMEGKDYVMKDGDVVEFRFN
+V
+>1_1570
+MRDASAAAGPPVDCRTVALTIGFVGLPNVGKSTLFNALTRQTVLAANYPFATIEPNVGVV
+NLPDERLPQLAEIFGSERILPATVSFVDIAGIVKGASEGEGLGNQFLANIREAHAIAQVV
+RAFDDGDVVHVDGKVDPASDMETINTELIIADMQTVEKAIPRVEKEVKGKKKEPADLEAL
+KAALAVLERGETIFAAKDKDKLDMDRLRELSLLTAKPFIYVFNSDEGVLGDEAKQQELRD
+LVAPADAVFLDAKLESDLVELSEEEAAEMLEMAGQDESGLDQLARVGFSTLGLQTYLTAG
+PKETRAWTIPVGATAPEAAGVIHTDFQRGFIKAEIVSFDDLIAAGSMADAKAAGKVRMEG
+KDYVMKDGDVVEFRFNV
+>2_763
+MSHAHHHGGGSSAAVLDSSLTRLGLVGSPNSGKSTLFNALTGLRVKTGNYPGVTVSRAEG
+VMVAEDGTRVVLEDLPGTYSLDPISPDEQVVADLLALDPADADHPQALLLVADATTLRRG
+LTMVAHALAVELPATLVLTFGDELALRGGSVDVTRLSRALGIPVLAATAGDARQREAVRA
+HLATDPAGWAVPPVAPPTDPAGIAAWIDSVLEAARYAVPRPDGRTRRIDDVLLHPVWGTL
+VFLVTMFAFFQVIFTVAAPLQALVEELFGWLGERAAALIPIEWLGRFVAEALIGGVGGVV
+VFLPQILLLFLMISLLESTGYMTRAAFLMDRVMSRFGLEGRSFVALLSSLACAVPGIMAT
+RSLPSARDRLATMMAAPSMTCSARLPVYVLLISLLVPSEVRWGPVGLQGLVMFALYLGGA
+TASMLTAAFWSRVVGRRQAAMPFYMEMPPYRLPKARTVVTSMWASAEGFLRKVTSIILVT
+TALLWVLLNVPVRSEEEMAGAGVAMDDPAAVAQYTIDHSAAAAVGKAVEPAFEPLGFDWR
+IDVGVLASLAAREVFVATLGQMAAAEDPEDPGDALASWTVTDDAGVERPLFTPDVVAALL
+VFFMLALQCMSTLAVMRRETGTWRWPLLAFGYYFTLAWLAAFAVRHVVLALT
+>2_1158
+MALTIGFVGLPNVGKSTLFNALTRQTVLAANYPFATIEPNVGVVNLPDERLPQLAEIFGS
+ERILPATVSFVDIAGIVKGASEGEGLGNQFLANIREAHAIAQVVRAFDDGDVVHVDGKVD
+PASDMETINTELIIADMQTVEKAIPRVEKEVKGKKKEPADLEALKAALAVLERGETIFAA
+KDKDKLDMDRLRELSLLTAKPFIYVFNSDEGVLGDEAKQQELRDLVAPADAVFLDAKLES
+DLVELSEEEAAEMLEMAGQDESGLDQLARVGFSTLGLQTYLTAGPKETRAWTIPVGATAP
+EAAGVIHTDFQRGFIKAEIVSFDDLIAAGSMNDAKAAGKVRMEGKDYVMKDGDVVEFRFN
+V
+>3_1286
+MRDASAAAGPPVDCRTVALTIGFVGLPNVGKSTLFNALTRQTVLAANYPFATIEPNVGVV
+NLPDERLPQLAEIFGSERILPATVSFVDIAGIVKGASEGEGLGNQFLANIREAHAIAQVV
+RAFDDGDVVHVDGKVDPASDMETINTELIIADMQTVEKAIPRVEKEVKGKKKEPADLEAL
+QAALAVLERGETIFAAKDKDKLDMDRLRELSLLTAKPFIYVFNSDEGVLGDEAKQQELRD
+LVAPADAVFLDAKLESDLVELSEEEAAEMLEMAGQDESGLDQLARVGFSTLGLQTYLTAG
+PKETRAWTIPVGATAPEAAGVIHTDFQRGFIKAEIVSFEDLIAAGSMADAKAAGKVRMEG
+KDYVMKDGDVVEFRFNV
+>4_1497
+MGPPVDCRTVALTIGFVGLPNVGKSTLFNALTRQTVLAANYPFATIEPNVGVVNLPDERL
+PRLAEIFGSERILPATVSFVDIAGIVKGASEGEGLGNQFLANIREAHAIAQVVRVFDDGD
+VVHVDGKVDPASDMETINTELIIADMQTVEKAIPRVEKEVKGKKKEPADLEALQAALAVL
+ERGETIFAAKDKDTLDMDRLRELSLLTAKPFIYVFNSDEGVLGDEAKQQELRDLVAPADA
+VFLDAKLESDLVELSEEEAAEMLEMAGQDESGMDQLARVGFSTLGLQTYLTAGPKETRAW
+TIPVGATAPEAAGVIHTDFQRGFIKAEIVSFDDLIAAGSMNDAKAAGKVRMEGKDYVMKD
+GDVVEFRFNV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000134.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000134.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d5272e80ada499c8faf9e5f168161f4666c85666
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000134.fa
@@ -0,0 +1,48 @@
+>0_1315
+MKNVVFLTGDVHYCAAHHYSPDRAAFTDFEPFWEFVAGPINAGSFGPNTLDGTFGPRLDF
+EAHGPVMGSPRSGEHQYFGHVEIPEDGREFRVRLINAVGRTVYSRTLTAA
+>1_1528
+MSLACVPHPGPVKQTTAPLSHSASRRSVLAAASAAVLAPAALAGPAAARPARHTPGGLVA
+SRLTLPSGVATGDVTSNSAVLWARSSGRSRLHATLRAVDEDGKVLRGRFARGLTLRSGWV
+DGATDHTAKILADTLPSDTRFEVTYAFEDEAGRLGESAVARFTTAPGARFGRKTSAAQSF
+VWTADTAGQGYGINPEIGGMRGYAAMHATKPDFFLHSGDTIYADNPIPETLEVAGEPTWR
+NLVTEETSKVAETLNEFRGRHRYNMMDDNLRALYADVPVIAQWDDHETTNNWWPGEVLED
+PRYTQVRDVDTLAARARRAWQEYMPIADSTALRRGSGFEPARIYRRIPRGATLDVFALDM
+RTHKGENTPGLETHETPILGEEQLQWLIRGLRASTATWKVIANDLPLGLVVPDGTGQESL
+SNGDDGAPLGRELEIARLLKAIKDHGVKNVVFLTGDVHYCAAHHYSPDRAAFTDFEPFWE
+FVAGPINAGSFGPNTLDGTFGPRLDFEAHGPVMGSPRSGEHQYFGHVEIPEDGREFRVRL
+INAAGRTVYSRTLTAA
+>2_1210
+MSLACVPHPGSVKQTTAPLSHSASRRSVLAAASAAVLAPAALAGPAAARPARHTPGGLVA
+SRLTLPSGVATGDVTSNSAVLWARSSGRSRLHATLRAVDEDGKVLRGRFARGLTLRSGWV
+DGATDHTAKILADTLPSGTRFEVTYAFEDEAGRLGESAVARFTTAPGARFGRKTSAAQSF
+VWTADTAGQGYGINPEIGGMRGYAAMHATQPDFFLHSGDTIYADNPIPETLEVAGEPTWR
+NLVTEETSKVAETLNEFRGRHRYNMMDDNLRALYADVPVIAQWDDHETTNNWWPGEVLED
+PRYTQVRDVDTLAARARRAWQEYMPIADSTALRRGSGFEPARIYRRIPRGATLDVFALDM
+RTHKGENTPGLETHETPILGEEQLQWLIHGLRASTATWKVIANDLPLGLVVPDGTGQESL
+SNGDDGAPLGRELEIARLLKAIKDHGVKNVVFLTGDVHYCAAHHYSPDRAAFTDFEPFWE
+FVAGPINAGSFGPNTLDGTFGPRLDFEAHGPVMGSPRSGEHQYFGHVEIPEDGREFRVRL
+INANGRTVYARTLTAA
+>3_1248
+MRLACVPHPGPVKQTTAPLSHSASRRSVLAAASAAVLAPAALAGPAAARPARHTPGGLVA
+SRLTLPSGVATGDVTSNSAVLWARSSGRSRLHATLRAVDEDGKVLRGRFARGLTLRSGWV
+DGATDHTAKILADTLPSDTRFEVTYAFEDEAGRLGESAVARFTTAPGARFGRKTSAAQSF
+VWTADTAGQGYGINPEIGGMRGYAAMHATKPDFFLHSGDTIYADNPIPETLEVAGEPTWR
+NLVTEETSKVAETLNEFRGRHRYNMMDDNLRALYADVPVIAQWDDHETTNNW
+>3_1249
+MDTLAARARRAWQEYMPIADSTALRRGSGFEPARIYRRIPRGATLDVFALDMRTHKGENT
+PGLETHETPILGEEQLQWLIRGLRASTATWKVIANDLPLGLVVPDGTGQESLSNGDDGAP
+LGRELEIARLLKAIKDHGVKNVVFLTGDVHYCAAHHYSPDRAAFTDFESFWEFVAGPINA
+GSFGPNTLDGTFGPRLDFEAHGPVMGSPRSGEHQYFGHVEIPEDGREFRVRLINAVGRTV
+YSRTLTAA
+>4_1455
+MSLACVPHPGPVKQTTAPLSHSASRRSVLAAASAAVLAPAALAGPAAARPARHTPGGLVA
+SRLTLPSGVATGDVTSNSAVLWARSSGRSRLHATLRAVDEDGKALRGRFSRGLTLRSGWV
+DGATDHTAKILADTLPSGTRFEVTYAFEDEAGRLGESAVARFTTAPGARFGRKTSAAQSF
+VWTADTAGQGYGINPEIGGMRGYAAMHATQPDFFLHSGDTIYADNPIPETLEVAGEPTWR
+NLVTEETSKVAETLNEFRGRHRYNMMDDNLRALYTDVPVIAQWDDHETTNNWWPGEVLED
+PRYTQVRDVDTLAARARRAWQEYMPIADSTALRRGSGFEPARIYRRIPRGATLDVFALDM
+RTHKGENTPGLETHETPILGEEQLQWLIRGLRASTATWKVIANDLPLGLIVPDGTGQESL
+SNGDDGAPLGRELEIARLLKAIKDHGVKNVVFLTGDVHYCAAHHYSPDRAAFTDFEPFWE
+FVAGPINAGSFGPNTLDGTFGPRLDFEAHGPVMGSPRSGEHQYFGHVEIPEGGREFRVRL
+INAAGRTVYSRTLTAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000135.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000135.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b471cc9f4cd515fe4782cf80ee9e9c46eaab3012
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000135.fa
@@ -0,0 +1,49 @@
+>0_1317
+MSAALYLDHAATAPVRRVALEAMWPALTGVYGNPSSAHEAGRAAAALLEDARARVARAIG
+ARAGQVVFTSGGTEADALAVLGTVRARILAGRPAGHVLTTGIEHSAVRQSCDQLARLHGV
+EVEHLALDRDGLTSADDLAARLRPDTALVSVHLAHNEVGTVQPVAELAAVAREAGVPLHV
+DAVQAAGQIPVDVRALGSDLVALSGHKVGGPKGVGALWVRPGHALEPLVPGGGQERGRRS
+GTQNVAGAAGFAAAFAEAEAERAAAADAWSGLRDRFAARALDGVQELVPDARLTGHPARR
+LPRHASFVLPGVNGESVLEEAARRGVLASAGSACSAHSTEPSPALLALGLSEDEARTALR
+CTFGPDADEAMLAAAADAIVDAVRTVSALR
+>1_1527
+MSTTLDLDHAATAPVRRSALEAMWPALTGVYGNPSSAHEAGRAAAALLEDARARVACAIG
+ARAGQVVFTSGGTEADALAVLGTVRARILAGRPAGHVLTTGIEHSAVRQSCDQLARLHGV
+EVEHLALDRDGLTSADDLAARLRPDTALVSVHLAHNEVGTVQPVAELAAVAREAGVPLHV
+DAVQAAGQIPVDVRALGADLVALSGHKVGGPKGVGALWVRPGHALEPLVPGGGQERGRRS
+GTQNVAGAAGFAAAFEEAEAERAAAADAWSGLRDRFAARVLDGVRELVPDARLTGHPARR
+LPRHASFALPGVNGESVLEEAARRGVLASAGSACSAHDAEPSPALLALGLSEDEARTALR
+CTFGPDADAPLLDAAADAIVDAVRTVSALR
+>2_1211
+MSTILDLDHAATAPVRRSALEAMWPALTGVYGNPSSAHEAGRAAAALLEDARARVARAIG
+ARAGQIVFTSGGTEADALAVLGTVRARILAGRPAGHVLTTGIEHSAVRQSCDQLARLHGV
+EVEHLALDRDGLTSADDLAARLRPDTALVSVHLAHNEVGTVQPVAELAAVAREAGVPLHV
+DAVQAAGQIPVDVRALGADLVALSGHKVGGPKGVGALWVRPGHALEPLVPGGGQERGRRS
+GTQNVAGAAGFAAAFEEAEAERAAAADAWSGLRDRFAARVLDGVRELVPDARLTGHPARR
+LPRHASFVLPGVNGESVLEEAARRGVLASAGSACSAHDAEPSPALLALGLSEDEARTALR
+CTFGPDADAPLLDAAADAIVDAVRTVTALR
+>2_1730
+MALDVAAVRQDFPILRSTLADGRPLVYLDSGATSQRPRQVIEAEVEFLTISNAAVKRGAH
+QLAEAATDRYESARETVAAFVGATDPRELVFTRNATEALNLVAYALGNGDDATPEHLRVR
+AGDEILVTEMEHHANLVPWQELARRTGATLRHIPLGEDFALDLVDLGSLVTERTKVVAFT
+HQSNVTGTVNPVATLGEAARAVGALTVLDACQSVPHMPVDVAALGVDFLAFSGHKMLGPT
+GIGALWGRYELLAELPPFLLGGSMIEVVHLDRSTYAEPPARFEAGTPPISQAVGLAAACD
+YLSALGMDAVAEHEHALTARALEHLAGMDRVRVIGAPAGPERSGAVSFAVEGIHPHDVGQ
+VLDSLGVQVRVGHHCAWPLHRRYGVPGTTRASFSVYSTLDEVDAFADGLAQTLAFFQGFG
+R
+>3_1247
+MSTTLDLDHAATAPVRRSALEAMWPALTGVYGNPSSAHEAGRAAVALLEDARARVARAIG
+ARAGQVVFTSGGTEADALAVLGTVRARILAGRPAGHVLTTGIEHSAVRQSCDQLARLHGV
+EVEHLALDRDGLTSADDLAARLRPDTALVSVHLAHNEVGTVQPVAELAAVAREAGVPLHV
+DAVQAAGQIPVDVRALGADLVALSGHKVGGPKGVGALWVRPGHALEPLVPGGGQERGRRS
+GTQNVAGAAGFAAAFEEAEAERAAAADAWSGLRDRFAARVLDGVRELVPDARLTGHPARR
+LPRHASFVLPGVNGESVLEEAARRGVLASAGSACSAHDAEPSPALLALGLSEDEARTALR
+CTFGPDADAPLLDAAADAIVDAVRTVAALR
+>4_1454
+MSTTLDLDHAATAPVRRSALEAMWPALTGVYGNPSSAHEAGRAAAALLEDARARVARAIG
+ARAGQVVFTSGGTEADALAVLGTVRARILAGRPAGHVLTTGIEHSAVRQSCDQLARLHGV
+EVEHLALDRDGLTSADDLAARLRPDTALVSVHLAHNEVGTVQPVAELAAVAREAGVPLHV
+DAVQAAGQIPVDVRALGADLVALSGHKVGGPKGVGALWVRPGHALEPLVPGGGQERGRRS
+GTQNVAGAAGFAAAFEEAEAERAAAADAWSGLRDRFAARVLDGVRELVPDARLTGHPARR
+LPRHASFVLPGVNGESVLEEAARRGVLASAGSACSAHDAEPSPALLALGLSEDEARTALR
+CTFGPDADAPLLDAAADAIVDAVRTVAALR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000143.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000143.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0c865927089f52cfe1acd850545e96c67459705f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000143.fa
@@ -0,0 +1,81 @@
+>0_1494
+MSSTRRDPLVGGIVDGRYEVLARLARGGMSTVYLALDTRLDREVALKVMHPHLAEDPVLV
+GRFEQEAKTAARLSHPHVVAVLDQGHTEDASGEVLAYLVMEHVPGHTLRTVIREQAPLTP
+REALRHLRPLVDGLAAAHRAGLVHRDAKPENVLVRTDGRITVADFGLSRAATAHTSAGQA
+VVGTPAYLAPEHIAGAPADARSDVYAAGIILFELLTGRQPFTAGTALQVAYRHVHERVPV
+PSSLQPGLPEALDDLVLWCTEPDPADRPADAGEVLDRLDAVAAELGPAELDRPPVLVPDA
+VEGRPGPEHDETTTLDALDRLDPKDPLDDADGDETTSLDAGDHHATRVLPSLPADALPTE
+ALAADDVVRRSPARRRRRP
+>1_1321
+MSSARRDPLVGGIVDGRYRVVERLARGGMSTVYLAVDERLDRQVALKVMHPHLAEDPVLV
+GRFEQEAKTTARLSHPHVVAVLDQGHTEAEDGDVLAYLVMEHVPGRTLRTVIRDRAPLSP
+REALRFLRPLVDGLAAAHGAGLVHRDVKPENVLVRDDGRVTVADFGLSRAATAHTMAGQA
+VVGTPAYLAPEHIAGAPADARSDVYAVGIILFELLTGRQPYTAATALQVAYRHVHERVPV
+PSTLHPGLPEDLDDLVLWCTEPDPADRPAGAGELLHRIEAVAAGLDPDAPDRRPAAQPAE
+GPGADPAPAGPAADGLEDAAPDGNLETRALDAGDHHATRVLPALAESDLDEDMTDVIDTR
+VATHGGDPRPAARPAEPIGPLGLDPAPADRHPGRGSRRRLRRAARRPALDLGQGTGRAAA
+IGAAVTLLLTGVALLLGWTLGSGGLGVGGVAVVPDLDGLAREAAEERLTAAGFTAAVTAR
+HDELRTEGTVVASSPAAGEPAGRGAPVELTVSAGPAPVPVPDLTGVVIRQAHGVARDARF
+TVEVAERRTDPAVPAGAVIEQHPAPGEQATPGTAVRVVLSEGRAVRPVPDMTGQDPETAH
+TTLADEGWDARVHRLPLPLSARGESRVLHQSPAAGTALPEGTAVHVWVG
+>1_1893
+MSLPDARWHVVSPSPFEHEQQGLDILREVLPDESPFQVWTNFEFPDEDGQWHEVDALVLA
+RTKFILVELKYYSGVLRGTGLRWERPGHSPQRSPLALAKKKAERFRSLLERTIESKMPGA
+GRQRIVPYVDYAVFLHHDRFRNEMAPQDSGRLFGLPHNETASNLPSIEHLVLAPATDRFP
+LIGEPREQVLVALMEHLNLADARQPEVGSWLLEERLGEPTPDGQDWLASHRFQERHFARI
+RFQQPREGAPSSDLARVREAARREFDLTRALHHEGLLTASDRVDNELGVGLVFPYDESLA
+PLPLWLESRAATLSQQNRLDLLRQLAETLEYVHSNGIVHRALSPEALWVKTPKQGEPRIL
+VADWQLAGVADRDKVDHAASLTQLSTQFGTTVRSTEELAPTSGALFRAPEDARRVSSLGR
+YKLDVFSVGALAAYLLTGAPAANTVAELHEHLATHQGLDVSVALPSVPEPVRQAILHATD
+PRPTARTATLNDFLAGLTEAQATAPQPASPALDPLEAAPGQALDSRFTLVRRLGKGSTAV
+GLLVDDAQTGSRQVLKVALDDEAATRLDDEAQVLRLLPLHKRLVRLLDGPFDVGGRRALL
+LTSAGTRTLSEVLRERQRLSLDHLERFGSELLEAAQALDAAGLRHRDVKPANIGVVRTPK
+HGEHLVLFDFSLARARSTDVRAGTPPYLDPFLEQGGRTGYDSAAELYAVAVVLYEMASGQ
+KPFYGDPEANPAAVRDDLTVPDGIFDPSLQAPLSALFERALARDAQARFHTVAELAAAWE
+ALFRNDADPVTAQDAETLAARATLETPLSEAGLSARGLSALEAIKVTAGPGGVAVEPHDV
+RTVRDLVLVDPIKLNSLAGSTTETRAEVRARAKQWRAAFKKELMRQATQVPQGTLPTPLD
+AAELLLRHAGAAHAEGVRAQLRLVLGLDGEVPALSTHAVLADARGVTPGLVPQLFGRAQQ
+AWTDVAETRSLLDSLDGALRAAVAERGGVSTPDELTSALEQTLSPATPAEVRDAEPRRIV
+QGLLWLLLDRERAAARGEADVPALVQRRREGRVVAVAEMPVLLDVAETLGAAAEAAVDGA
+GDPESALVPADLVQTRVAAVLDAVDGLPEALRSWRRAAALAAHVSATTCLSAAGEWHHRL
+LAPATAAHHALQGASGTVQLSRERAAERVGARFPALSPLPRDAALDRVLAEAELGLVFDE
+DLGPQGAYRSRQTLAPTTGFATRAETRLVEHQRPLSELGVEGQRLLDSQRNRSYLALGVP
+AQRLARLESALVRRFHAEPLDLTDLFIRLLKDQAAAHPKMTWDHVTAADAEPDGSRPAQG
+LNVLVRNLLPELEQHLSRTIGDPGRAASPVLLTGAAVLARYGHLGVLARWADLAEYRARP
+VWLVVPQVAGNVGPRLDGVSVPKNTPGQYVPLTPEWIDGLAALMAAQPLTEESRT
+>2_1389
+MSSTRRDPLIGDLVDGRYEVLDRVARGGMSTVYRALDHRLDREVALKVMHPHLAEDPALV
+GRFEREAKTAARISHPHVVAVLDQGHTADEAGDVLAYLVMEHVPGRTLRAVIREEAPVAP
+RRAVALLEPVVEGLAAAHRAGLVHRDVKPENVLVRTDGRITVADFGLSRAATGHTSAGQT
+VFGTPAYLAPELISGTGGDARADVYGVGIMLFELLTGTQPFTAATPLQVAYRHVHERVPV
+PSSVRPGLPEALDDIVLWCTEPRPADRPEDAAALLPELRRVAALLPQTAPADEAPAADDA
+PTVALAVSPTVPTVPVPDAADATARLEPRRPDPRRAEPVPTPATATAASPSSDLSSAVPE
+APRPAPVAPRPASARQRRRTARTPEVVLGAGMGRTVAVGAAVTLLLAGMALLLGWILGSG
+GISGPAGVVVPPLWGLEQQEAAARLAEAGLTSAVVSRHDERFSDGVVLDVSPAAGSTVDA
+GGPVRLTVSDGPAPVPAPDLAGLTVTDAHAVAEDGRVGVVVADRVADRAVPAGAVVSQSP
+EAGAEMTPGDEVAVVLSTGPATHPLPDLGGLTVGEARTRLADLGFVPDVRTLPLPGPSGD
+AARVLRQGTPAGTVLPEGASVQLWTL
+>3_1050
+MSSARRDPLVGGIVDGRYRVVERLARGGMSTVYLAVDERLDRQVALKVMHPHLAEDPVLV
+GRFEQEAKTTARLSHPHVVAVLDQGHTEAEDGDVLAYLVMEHVPGRTLRTVIRDRAPLSP
+REALRFLRPLVDGLAAAHRAGLVHRDVKPENVLVRDDGRVTVADFGLSRAATAHTMAGQA
+VVGTPAYLAPEHIAGAPADARSDVYAVGIILFELLTGRQPYTAATALQVAYRHVHERVPV
+PSTLHPGLPEDLDDLVLWCTEPDPADRPAGAGELLHRIDAVAAGLDPDEPDRHPAEGPGA
+EPAVAAPAADGPEDAAPDGNLQTRALDAGDHHATRVLPALAESDLDADMTDVIDTRAATR
+GADRRPAAHPAEPIGPLGLDPAPADRHPGRESPRRLRRAARRPALDLGQGTGRAAAIGAA
+VTLLLTGVALLLGWTLGSGGLGVGGVAVVPDLDGLAREAAEERLTAAGFTAAVTARHNEL
+RTEGTVVASSPAAGEPAGRGTPVELTVSAGPAPVPVPDLTGVVIRRAHGVARDARFTVEV
+AERRTDPAVPAGAVIEQHPAPGEQATPGTAVRVVLSEGRAVRPVPDVTGQDPETARTTLA
+DDGWDARVHRLPLPLAGRGESRVLHQSPAAGTALPEGTAVHVWVG
+>4_1275
+MSSARRDPLVGGIVDGRYRVVERLARGGMSTVYLAVDERLDRQVALKVMHPHLAEDPVLV
+GRFEQEAKTTARLSHPHVVAVLDQGHTEAEDGDVLAYLVMEHVPGRTLRTVIRDRAPLSP
+REALRFLRPLVDGLAAAHRAGLVHRDVKPENVLVRDDGRVTVADFGLSRAATAHTMAGQA
+VVGTPAYLAPEHIAGAPADARSDVYAVGIILFELLTGRQPYTAATALQVAYRHVHERVPV
+PSTLHPGLPEDLDDLVLWCTEPDPADRPAGAGELLHRIDAVAAGLDPDEPDRRPAEGPGT
+DPAAAAPAADGLEGAAPDGDLPTRALDAGDHHATRVLPALAESALDDDVTDVIDTRAATH
+GGDPRPAARPAEPVGPLAVDPAPADRHPGRGSRRRLRRAARRPALDLGQGTGRAAAIGAA
+VTLLLTGVALLLGWTLGSGGLGVGGVAVVPDLDGLAREAAEERLTAAGFTAAVTARHDEL
+RTEGTVVDSSPAAGEPAGRGAPVELTVSAGPAPVPVPDLTGVVIRQAHGVARDARFTVEV
+AERRTDPAVPAGAVIEQHPAPGEQATPGTAVRVVLSEGRAVRPVPDMTGQDPETAHTTLA
+DEGWDARVHRLPLPLSARGESRVLHQSPAAGTALPEGTAVHVWVG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000144.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000144.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d730c0aa840cf7b222d32b1609dacc822083cb15
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000144.fa
@@ -0,0 +1,37 @@
+>0_1521
+MTTHTTTAQRSSKHPTTIGIDVGGTGMKGGLVRLGSGPKSGTLRGDRFRIPTPQPAMAEP
+VAATLAAITAELDARDKAPAPTAPLGVCFPSIVKDGVCLSANNIDPSWIGTDLKAAFEEH
+LRRPVRVVNDADAAGLAEARYGAGRGVSGLVLVITLGTGIGGAMVHDGVLVPNFEVGSLE
+LDGVMAETRASAKAREREDLSWAEYAQRLQRFFSHVEHVFSPDLFIVGGGISKRPDDYLP
+LLSLRTPIVPAQLRNNAGIVGAALAAHDSLADAR
+>1_1293
+MTTHTSTAQRSSKYPTTIGIDVGGTGMKGGLVRLGSGPKAGTLRGDRFRIPTPQTAMPEP
+VAATLAAITAELDGREKAPKPSAPLGVCFPSIVKDGVCLSANNIDHSWIGTDLRGTFEEH
+LRRPVTVVNDADAAGLAEARYGAGRGVRGLVHVITLGTGIGGAMIHDGMLVPNFEVGSLE
+LDGVMAESRASAKARERDQLSWAEYAERLQRFFSHVERIFSPDLFIVGGGISKRPDDYLP
+LLRLRTPIVPAQLQNNAGIVGAALAAHGSLADGN
+>2_1385
+MHRSRPAPPSPPAPSAYPRRLLGVDLGGTAAKAGVLELARDGRARILARSRAAHAGADPA
+SAVTRAAADALSRAGVRVPDGAGFACAAWLDPATGRARASPHLPSLVGIRPAALLTPVLE
+AAGAAGHGLVPVALNDADAAALAESRLGAARPAPGDLPGAPTLFVALGTGVGGAVIVDGA
+VLPGARGMHGEAGHICVDPDGPACPCGARGCWELYASASALARTLPGRPIADVLEAAVAG
+PGPERDAVLDAGEWLGRGLAPAVCLLDPVRVVVGGGLMAAGELLLPTARAALRRALPTAA
+ADRPPELVAAALGNDAGWIGAALADGARV
+>2_1417
+MSFPNTGVIPRLPPAPSKHPSVLGVDIGGTGMKGGIVRLGHGPKSGTLRGDRFRLDTPQP
+ASPATMARTLAQIVSELDHREKAPDADSRVGVCFPSIVQHGVCRSANNIDPSWIGVSLQD
+TFEEALQRPVTVVNDADAAGLAEARYGAGAGVPGLVMVITLGTGIGGAMINDGVLVPNFE
+VGSLELDGVMAESRASAKAREREGLDWPEYALRLQRFFSHLERIFSPDLFIVGGGISKRP
+HDYLPLLQLETPIVPAMLQNNAGIVGAALAAHADPADGLLR
+>3_1022
+MTTHTSTAQRSSKYPTTIGIDVGGTGMKGGLVRLGSGPKAGTLRGDRFRIPTPQPAMPEP
+VAATLAAITAELDGREKAPKPSAPLGVCFPSIVKDGVCLSANNIDHSWIGTDLRGRFEEH
+LRRPVTVVNDADAAGLAEARYGAGRGVRGLVHVITLGTGIGGAMIHDGVLVPNFEVGSLE
+LDGVMAESRASAKARERDQLSWAEYAERLQRFFSHVERIFSPDLFIVGGGISKRPDDYLP
+LLRLRTPIVPAQLQNNAGIVGAALAAHGSLADGN
+>4_1247
+MTTHTSTAQRSSKYPTTIGIDVGGTGMKGGLVRLGSGPKAGTLRGDRFRIPTPQPAMPEP
+VAATLAAITAELDGREKAPKPSAPLGVCFPSIVKDGVCLSANNIDHSWIGTDLRGRFEEH
+LRRPVTVVNDADAAGLAEARYGAGRGVRGLVHVITLGTGIGGAMIHDGVLVPNFEVGSLE
+LDGVMAESRASAKARERDQLSWAEYAERLQRFFSHVERIFSPDLFIVGGGISKRPDDYLP
+LLRLRTPIVPAQLQNNAGIVGAALAAHGSLADGN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000145.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000145.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0f47e59c4694c0ce50867e2f3399c60767ddcaee
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000145.fa
@@ -0,0 +1,43 @@
+>0_1527
+MTEHTAPTPLPLSLLDLATVRDGASVAEAVAESVEQAQAAERAGFRRVWYAEHHNMPAIA
+SSATSVLIAHVAAHTESIRLGSGGVMLPNHSPLVIAEQFGTLAELHPGRIDLGLGRAPGT
+DQRTLQALRRDPSAAERFPQDVLELQGYLTGRTRIPGIEAYPGKGTDVPLYILGSSAFGA
+QLAAQLGLGYAFASHFAPQMLEHAARLYREHFEPSEALAEPHFIAAANVIAADTREEADR
+EWEAARRARIRMMLGRGRTLSDDEVEMLLHSPAGQQVLTMLECTAVGTGEETATWLRDFA
+AKVQADELIITTAAQDAGVRRRTLELLGEHVVRA
+>1_1286
+MTEHTAPTPLPLSLLDLALVRDGAPMGEAFAESVEQARVAEAAGFRRVWYAEHHNMPSIA
+SSATAVLIAHVAAHTDSIRLGSGGVMLPNHSPLVIAEQFGTLAELHPGRIDLGLGRAPGT
+DQRTLQALRRDPSAAERFPQDVLELQGYLTGQSLIPGIDAYPGKGTNVPLYILGSSAFGA
+QLAAQLGLGYAFASHFAPQMLEHAARLYREHFEPSEALAEPHFIAAANVIAADTEEVAER
+EWQAAQRARIRMMLGRGRTLTDDEVEMLLHSPAGQQVLGMLECTAVGTGPTTAAWLHDFA
+ARVQADELIITTAAQDAGVRRRTLELLGEHVVRA
+>2_121
+MSIPLSVFDPVLLPAETDPREAIDDARTLAAAADALGYRRLWHGEHHLNPGVLGSNPALT
+LALVGPVTQHIRLGSAASLVGPRTPLVLAEDFGLLAAAFPGRIDLGLGRAAAPGGPPPGT
+RAETPTGDGGPAQDPQREPAGAGASSGQDPAAGPSEVDGVVIPAAPDLSAALGSPLRAAS
+RALLPTPSTPALDYGAQVDLLLGLLDGTAQHDGAALGQVVARPAVDVEPWVLGSGPGVSA
+EVAARRGLRFGANYHVSPAGTVAAVRRYRELFRPSPEVPCPVVSVSAEVLIADTAAEARR
+RASGYAAWVLSIRSGAGAVPYPSPAHPEPSRTPQEEALVADRLQTRFVGTAEQVAERLDA
+LARLTGADELLISASAHRVEHRVETLTRLAEIWRTA
+>2_1423
+MTADVRPVVPPETAPAGVPLSLLDLATVRGDQRIGEALGQSVELAQTAEAQGFTRVWYAE
+HHNMPGIASSATAVLLAHVAAHTERIRVGSGGVMLPNHSPLVVAEQFGTLAELHPGRVDL
+GLGRAPGTDQRTLQALRRSPEAADRFPQDVLELQGYLRGESRMPGIDAYPGRGTDVPLWI
+LGSSAFGANLAAQLGLGYAFASHFAPQMLEHAARLYREHFTPTDALDAPHFIAAANVVVA
+DTDEEAQRLWEATRRSRVRMFLGRGRHLTEDELDMLMDSPAGEQVLGMLRHTAVGTPDVV
+RAWLDDFAARVEADELIVTAAAVDHPARVRTLELLGEHVIRR
+>3_1016
+MTEHTAPTPLPLSLLDLALVRDGAPMGEAFAESVEQARVAEAAGFRRVWYAEHHNMPSIA
+SSATAVLIAHVAAHTDSIRLGSGGVMLPNHSPLVIAEQFGTLAELHPGRIDLGLGRAPGT
+DQRTLQALRRDPSAAERFPQDVLELQGYLTGQSLIPGIDAYPGKGTNVPLYILGSSAFGA
+QLAAQLGLGYAFASHFAPQMLEHAARLYREHFEPSEALAEPHFTAAANVIAADTEEVAER
+EWQAAQRARIRMMLGRGRTLTDDEVEMLLHSPAGQQVLGMLECTAVGTGPTTAAWLHDFA
+ARVQADELIITTAAQDAGVRRRTLELLGEHVVRA
+>4_1241
+MTEHTAPTPLPLSLLDLALVRDGAPMGEAFAESVEQARVAEAAGFRRVWYAEHHNMPSIA
+SSATAVLIAHVAAHTDSIRLGSGGVMLPNHSPLVIAEQFGTLAELHPGRIDLGLGRAPGT
+DQRTLQALRRDPSAAERFPQDVLELQGYLTGQSLIPGIDAYPGKGTNVPLYILGSSAFGA
+QLAAQLGLGYAFASHFAPQMLEHAARLYREHFEPSEALAEPHFIAAANVIAADTEEVAER
+EWQAAQRARIRMMLGRGRTLTDDEVEMLLHSPAGQQVLGMLECTAVGTGPTTAAWLHDFA
+ARVQADELIITTAAQDAGVRRRTLELLGEHVVRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000157.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000157.fa
new file mode 100644
index 0000000000000000000000000000000000000000..116c055c8ab8ffb7ecb46ff1b229d69126ea9b1a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000157.fa
@@ -0,0 +1,33 @@
+>0_2034
+MSGAPATGQATTTAAGGSPSSPAPAPPEWDAVLFDLDDTLLDLRAAQHAAFDATVRRQWA
+GAADVDPARMAEATEAFASDAAGHYERYVAGELTFEQQRLARAADALRALGAPEESATPL
+EALWTADYEDVVRGHWALFPATAEVLAQVRSSGRGVGIVTNNVEAYQRAKADALGLEWVD
+VLIGSDTAGAPKPDPAPFLAGCARLGAEPGRTLMVGDSLTHDVAGARAAGLVPVWMSPAA
+PARGAAEDPVWDPERGCWRLRAIGGLRAWLRR
+>1_167
+MTPPAALLLDLDGTLLDHGRAARIALGQAMQEAGLTDADHSSALLLWGELERIHFQEYLD
+GQTTFEEQRVRRVRAFLAHYGRTRLDRTSALAWFDTYRTAYERAWS
+>1_824
+MSRDASTTPAGGSAGAPAPPAWDAVLFDLDDTLLDLRSAQHAAFDATVRRQWAGAADVDP
+AVLAEATDAFASDAGGHYGRYVAGELTFEEQRLARVADALRALGVPEDAATPLDGLWTTD
+YEEVVRGHWALFPATADVLAEVRGTGRGVGIVTNNVEAYQRGKADALGLEWVEVLIGSDT
+AGAPKPDPAPFLAGCSRLGTDPGRTLMVGDSLRHDVEGARSAGLVPVWMSPDAPAHGGAE
+EPLWDEEHACWRMRAIGGLRTWLAA
+>2_1928
+MIRTPGTPSAPVVDGVLFDLDDTLLDLRGAQLPAFAETVRAQWPDAPPAEAGVFVRAADH
+FAADRSGHYQRYIAGELDFAGQRLARARDALAVLGAPGAVAEPDPALWTDEYEVRVRAHW
+ALFDDVVPTLATLRSSGVALGIVTNNVEAYQRAKADALGLEAITVLVGSDSAGAPKPDPA
+PFLEACRRMGTTPGRTACVGDSLSHDVRGARAAGLVPVWLRRGAGAADGGGEGRWDAAEG
+AWTIGGLGALAAWFPGSGADLASGREVL
+>3_555
+MSRGASTTPADGSAGAPAPPAWDAVLFDLDDTLLDLRSAQHAAFDATVRRQWAGAADVDP
+AVLAEATEAFASDAGGHFGRYVAGELTFEEQRLARVADALRALGVPEDAATPLDGLWTTD
+YEEVVRGHWALFPATADVLAEVRGTGRGVGIVTNNVEAYQRGKADALGLEWVEVLIGSDT
+AGAPKPDPAPFLAGCSRLGTDPGRTLMVGDSLRHDVEGARSAGLVPVWMSPDAPAHGGAE
+EPLWDEEHACWRMRAIGGLQTWLAA
+>4_783
+MSRGASTTPADGSAGAPAPPAWDAVLFDLDDTLLDLRSAQHAAFDATVRRQWAGAADVDP
+AVLAEATEAFASDAGGHFGRYVAGELTFEEQRLARVADALRALGVPEDAATPLDGLWTTD
+YEEVVRGHWALFPATADVLAEVRGTGRGVGIVTNNVEAYQRGKADALGLEWVEVLIGSDT
+AGAPKPDPAPFLAGCSRLGTDPGRTLMVGDSLRHDVEGARSAGLVPVWMSPDAPAHGGAE
+EPLWDEEHACWRMRAIGGLQTWLAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000159.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000159.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b3529e98475e8c2f448b526f9c9c8357d3f6b5bb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000159.fa
@@ -0,0 +1,22 @@
+>0_2133
+MSPALMGASPWEWVLGLAVLAAGGALGALLRLTLQEHLPRRGVLAANTLAAGVLGFSLAL
+ALPSLVYASGLAGDPLGVAGLLVASLTAGFCLALGTWSTVAGQAADAVLAGRWGAAGRIW
+AAHLGLGLLAAAAGWGLGLGARLLVA
+>1_720
+MLSGFCLALGTWSTVAAEAADAALARRWGAAARLWTAHLGLGLVAVVVGWGAGLGLHAVL
+AG
+>1_721
+MSGAGYEVFALFQVALLACLAAGGVLGALARRRLTDRLGPRGLLTANTTAALLLGVTVGL
+AVPELVYASGG
+>2_2027
+MSAGTVLLTVLLAGLAAAVGAGLRHLADHRWGGRGVLLANVTASALAGALFAIGFGPGSA
+DPEGPAGAALALGAAGAFVLALGTWSTVAFQAAQEVLAGRTRRAVRVWLVHLASGTAAAV
+VGVLAVGFLVR
+>3_460
+MSGAGYEVFALFQVALLACLAAGGALGALARGRLTDRLGPRGLLTANTTAALVLGATVGL
+AVPELVYASESWGDGQGLMLVAAVSAVVSGFCLALGTWSTVAAEAADAALARRWGAAARL
+WTAHLGLGLVAVVVGWGAGLGLHAVLAG
+>4_685
+MSGAGYEVFALLQVALLACLAAGGALGALVRRRLTDRLGPRGLLTANTTAALLLGVTVGL
+AVPELVYASGGGGDGQGLVLVAAVSAVVSGFCLALGTWSTVAAEAADAVLARRWGTAARL
+WAAHLGLGLVAVVVGWGAGLGLHAVLAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000163.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000163.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6fd632bd0ff2f8c0f0f726dd8e57273985e17c53
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000163.fa
@@ -0,0 +1,36 @@
+>0_2268
+MTSVPTVPFHDGQSIPQLGYGVWRVEDEVAADVVAQAIRAGYRHIDTAAIYGNEEGVGRA
+VAASGVPREELFITTKVWNSAHGYDEALAALEESLGKLGTDYVDLWLIHWAKPTQGRYVD
+TWKALIEAQRQGKVRSIGVSNFPAEQLEEIIEATGVVPVIHQVETHPYWQQRELRELEER
+HGILHESWSPLGQGGELLEDPEITAIAEAHGATPAQVVIAWHLAKGFVVIPKSVTSERIV
+SNLAAADVELTEDEVARIDALDREDGRIGPDPATIEF
+>1_619
+MTSVPTVPFHDGQQIPQLGFGVWKVEDDVAADVVEQAIRAGYRHIDTAAIYGNEEGVGRG
+IAASGVAREELFLTTKVWNSDQGYEEALAALDVSLDKLGTDYVDLYLIHWAKPAQGKYLE
+TWKALIEAQKQGKVRSIGVSNFPAAQLEEIIEATGVVPVIHQVETHPYWQQRELREVEGR
+HGIVHESWSPLGQGGDLLADPVVTEIAEARGATPAQVVIAWHLAHGFVVIPKSVTPERIV
+SNLEAAGVELTDDDVARIDALDREDGRLGPDPAVIDF
+>2_567
+MSTDSRHTAIPVDETPVPETLTLTGTGVDGVEMPRIGLGTWPLRGAEARDAVEQALRIGY
+RHVDTAQNYGNEDAVGEGIAAAIHAGVLDRDQLFVTTKVNREHHGDARTVRAAVECRLRV
+LGLEHVDLVLVHWPNPDQDRYLETAWSLSELAEDGRIRAWGVSNFTPAHLDRLAGAGLRA
+PVDQIEVGPLRQSPAWQEGVRAHGAAITAYSPLGRADQDLGALEPVAAAAARTGRTPAQV
+VLRWHLQSGRAAVPKSVDPARQAQNLDVFSFALTAEEMAAIDALDTGEGPRRHPDEFGH
+>2_2126
+MTTVPQTPFRDGQSIPQLGYGVWQVEDAVAADVVEQAVRAGYRHIDTAAVYGNEEGVGRA
+VAAAGVPREELFITTKVWNSDQGYDEALAALEASLAKLGTDYVDLWLIHWAKPAQGKYVD
+TWKALIEAQRQGRARSIGVSNFPAEQLEEIISATGVVPVIHQVETHPYWQQRELREVESR
+HGIVHESWSPLGQGGELLSDPVITAIAEAHGATPAQVVIAWHLAEGFVVIPKSVTPERIV
+SNLTAAELELTAEEVDQIRGLDRADGRIGPDPASITF
+>3_365
+MTDVPTVPFHDGQQIPQLGLGVWQVEDDVAADVVEQAIRAGYRHIDTAAIYGNEEGVGRG
+IAASGVAREELFLTTKVWNSDQGYEEALAALDVSLDKLGTDYVDLYLIHWAKPAQGKYLD
+TWKALIEAQKRGKVRSIGVSNFPAAQLEEIIEATGVVPVIHQVETHPYWQQRELREVEGR
+HGIVHESWSPLGQGGDLLADPVVTEIAEVRGATPAQVVIAWHLAQGFVVIPKSVTPERIV
+SNLEAAGVELTDDDVARIDALDREDGRLGPDPAVIDF
+>4_589
+MTDVPTVPFHDGQQIPQLGLGVWQVEDDVAADVVEQAIRAGYRHIDTAAIYGNEEGVGRG
+IAASGVAREELFLTTKVWNSDQGYEEALAALDASLDKLGTDYVDLYLIHWAKPAQGKYLD
+TWKALIEAQKQGKVRSIGVSNFPAAQLEKIIEATGVVPAIHQVETHPYWQQRELREVEGR
+HGIVHESWSPLGQGGDLLADPVVTEIAEARGATPAQVVIAWHLAQGFVVIPKSVTPERIV
+SNLEAAGVELTADDVARIDALDREDGRLGPDPAVIDF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000164.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000164.fa
new file mode 100644
index 0000000000000000000000000000000000000000..35c658d9a6abc95325d42b6f78d3cae675286cef
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000164.fa
@@ -0,0 +1,42 @@
+>0_2293
+MSTPTRNPTPANSSTSGTTSRKAKTIVWVVLAAVVVAGVIAGVVAVGAARNATPDAAATQ
+AGQSAAQGSGPTTAEEAGELVVRPNSRVLSKAPNEQAVLVEFLDFECEGCGAAYPVVEEL
+RAEYADTVTFVTRYFPLPGHRNAMPAAVAVEAAAQQGEYEAMYQRMFETQAQWGEATEDK
+SPVFRGYAEELGLDMAAYDKAVADPATRARVEADVADGIALGVQGTPTFFLDGEMLTLTS
+LEQFRAEVDAAASN
+>1_586
+MTSTDPTPAKAASAPNRQRRAKIIVWVVLAALVLAGVVAFFAARAPSTPEAAPAQAGQAA
+SSGTGQTAASEAAPVVRPDSRVLSQAPNEKAVLVEFLDFECEGCKAAHPVVEELRAEYAD
+TVTFVHRYFPLPGHPNSMTAAVAVEAAAQQGAYEAMYQKMFDTQEQWSHTGQDRSPVFRG
+YAEDLGLDMTAYDKAVADPATRARIEADVADGVALGVQGTPTFFLDGQVLTLNTLEQFRA
+EVDAAASN
+>2_1166
+MSWRTIRTEAGSAVLLVVVTAVALLWANSPLSEAYFGLWDVEIGFDVGGFGLHMNLHHWI
+NDGLMMTFFLVVGLEVRQEFAHGTLRDASRARLALIAGVVGVALPAVFYILIVAAAGGEG
+LGGWGAVVGTDTAFLLGALALVGPKLSGQLRVFLLTLTVVDDFLAVSIIGIVYSDEIRLV
+PLLIAGACLVGLWLLGRSRQWSATPYVLIVIVLWFATVESGVHASLAGMVAGLLIPAYPT
+RRQQVVEARQLFRDFWQSPSAASARAVDRGLAQGISVNERMHEVLRMPTALVIVPIFALA
+NAGVDLRGGVLVDSFQSSVTWGVIVGLVLGKLLGIGLATFVAVKLGAGRLPEGVGMGSVF
+GGAALSGIGFTVSLLVIGLAFGSTSDLGRQATVGVLVAMVLATALGWLIFRVAAKRWGEE
+TADLPMVLTPPVDPEVDHIRGPEDAQLTLVEYIDFECAYCAHATGSWDDLRSRFGDDLRY
+VVRQLPHHPHGPLAARASEAASNQGMFWPWLDFVFTRQDALEREDLIRYAEELGLDVAQF
+TADLDSAAVGARVERDLESADASGAHATPTFFVDGRRLLGSYDARTLTSALEASRRGTRT
+QEVRS
+>3_311
+MSTPTRNPTPSDPSTPGTTSRKAKTIVWVVLAAVVLAGLIVGVVAASGPRDAAPQGSGQT
+ASSGTGQSAPSEATPVMRPDSRVLSKAPNEQAVLVEFLDFECEGCKAAYPVVEELRAEYA
+DTVTFVHRYFPLPGHPNSMTAAVAVEAAGQQGQYEAMYQQMFDTQEQWSHTTEDRSPVFR
+GYAEDLGLDMAAYDAAVADPATRDRIEADVADGTALGVQGTPTFFLDGQMLTLNTLEQFR
+AEVDAAATTD
+>3_1721
+MTSPDPTASTPSSPTPSRQRRAKIVVWVLLGLVVAAALIGYLVARGTATAQQQDPNQSTA
+QSTGQSTGSAGQLVRENSRVLSQAPNEKAVLVEFLDFECEACAAAYPFVEDLRAEYADTV
+TFVHRYFPLPGHPNSVTAAIAVEAAAQQGAYESMYQKMFETQTEWSHTTEDRSPVFRAYA
+EELGLDMAAYDAAVADPATRDRVELDVADGTALGVAGTPTFYLDGEPLTVNSLEEFTAAV
+EAATQD
+>4_1948
+MSTPTRNPTPSDPSTPGTTSRKAKTIVWVVLAAVVLAGLIVGVVAASGPRDAAPQGSGQT
+ASSGTGQSAPSEATPVMRPDSRVLSKAPNEQAVLVEFLDFECEGCKAAYPVVEELRAEYA
+DTVTFVHRYFPLPGHPNSMTAAVAVEAAGQQGQYEAMYQQMFDTQEQWSHTTEDRSPVFR
+GYAEDLGLDMAAYDAAVADPATRDRIEADVADGTALGVQGTPTFFLDGQMLTLNTLEQFR
+AEVDAAATTD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000171.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000171.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f00ac872697fe56fdb5cc3c64cbb6e06b6b6b63c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000171.fa
@@ -0,0 +1,65 @@
+>0_2513
+MTDEQTTTTAAPRRNGGDLAVETLHALGARTVFGIPGQHALGLFDALSRSPLEFVSNRVE
+NNAAFAADGYARATGEVGVLFLSTGPGALTSLAGLQEAYATGVPLVVVASQIPLSGLGAR
+RKGMLHQLDDQKASARNVTKAQFTVHHASGIPSAIQDAWAEAVTVPQGPVWVEIPQDVLL
+GEVLVPPVQDALAVPYDHPPRAELVDESVRWLRDAQRVAIVAGGGVRRSGRAAMESLREV
+AELLQAPVVCSPGGNTAFPWQHPLSLGGWVEDRLVTDLLEDAEVLLVVGSSLGEVTSNYF
+TLEPRGRLIQVDAEPRVLETNHPTLGVRADAGQALEALAAALRESGSVAEDAPVWHGRTP
+AEVVAETMGRVAARLDAQDLGVERRLLADIRAAVPSAMQTYWDMTIAAYWAWNCWDAREG
+EFHSAQGAGGLGYGFPAAFGGAVGLAHQGRTGIDGRVLAVAGDGSAMYSIAELAAARQHD
+AAVTWLIIDDGGYGILREYMEGAFGKATATELDRPDFQALAASFGVPAETVGVEDVRGAL
+ERAFQADGPNVVVVQTRLAMWAPSHLGEAPEV
+>1_365
+MTDEQTTTAAPRRNGGDLAVETLHALGARTVFGIPGQHALGLFDALSRSPLEFVSNRVEN
+NAAFAADGYARATGEVGVLFLSTGPGALTSLAGLQEAYATGVPMLVVASQIPLSGLGARR
+KGMLHQLDDQKASARNVTKAQFTVHHASGIPSAIQDAWAEAITVPQGPVWVEIPQDVLLG
+EVMVPPVEDALAVPYDHPPRAELVAESARWLRGAGRVAIVAGGGVRRSGRAAMESLREVA
+ELLQAPVVCSPGGNTAFPWEHPLSLGGWVEDRLVTDLLEDAEVLLVVGSSLGEVTSNYFT
+LEPRGRLIQVDAEPRVLETNHPTLGVRADAGQALEALAAALRESGSVAQDAAVWHGRTPA
+EVVADVNARITARLDAQDLGVERRLLADIRAAVPSTMQTYWDMTIAAYWAWNCWDAQDGE
+FHSAQGAGGLGYGFPAAFGGAVGLAHQGRTGIDGRVLAVAGDGSAMYSLAELAAARQHGA
+AVTWLIIDDGGYGILREYMEGAFGKATATELDRPDFQALAASFGVPAETVGVEDVRGALE
+RAFQADGPNVVVVQTRLAMWAPSHLGEAPEV
+>2_1719
+MSARHDAAVPQEAADMAAAAGGAGGGTARRNGGDLAVETLHALGARTVFGIPGQHALGLF
+DALSRSSLRFVSSRVENNAAFAADGYARATGEVGVLFLSTGPGALTSLAGLQEAYATGVP
+MLVIASQIPLSGLGARRKGMLHQLDDQKASAKNVTKAQFTVHHASGIPSAIQDAWAEAVT
+VPQGPVWVEIPQDVLLGEVMVPPVQDALAVPYDHPPRAELVAESVRWLRGAERVAIVAGG
+GVRRSGRAAMASLREVAELLQAPVVCSPGGNTAFPWGHPLSLGGWVEDRHVTELLEDAEV
+LLVVGSSLGEVTSNYFTLEPRGRLIQVDAEPRVLETNHPTLGVRADAGQALAALADALRA
+DETARPAERPWHGRTPADVVAEVNAKVTARLDAQDLGRERRLLADIRAAVPSTMQTFWDM
+TIAAYWGWNCWDAQDGEFHSAQGAGGLGYGFPAAFGASVGLASAGRDARVLAVAGDGSAM
+YSIAELAAARQHDADVTWLIIDDGGYGILREYMEGAFGKATATELARPDFAALATSFGVP
+AETVGVEDVRGALERAFQEDGPNVVVVQTRLAMWAPSHLEAPVPADEAGPGLAETTRPEG
+RAA
+>2_2388
+MRALEDRRPRNSRSETLSGRGVTKAQFTVHHASGIPSAIQDAWAEAVTVPQGPVWVEIPQ
+DVLLGEVMVPPVQDARAVPYDHPPRAELVAEVVRWLRGAGRVAIVAGGGVRRSGRAAMES
+LREVAELLQAPVVCSPGGNTAFPWEHPLSLGGWVEDRLVTDLLEDAEVLLVVGSSLGEVT
+SNYFTLEPRGRLIQVDAEPRVLETNHPTLGVRADAGQALQALAAALRESGSVARDAAVWH
+GRTPAEVVADVNARITARLDAQDLGVERRLLADIRAAVPSTMQTYWDMTIAAYWAWNCWD
+AQDGEFHSAQGAGGLGYGFPAAFGGAVGLAHQGRTGIDGRVLAVAGDGSAMYSLAELAAA
+RQHDVDVTWLIIDDGGYGILREYMEGAFGKATATELDRPDFQALAASFGVPAETVGVEDV
+RGALERAFQADGPNVVVVQTRLAMWAPSHLGEAPEV
+>3_98
+MSDEQTTTAAPRRNGGDLAVETLHALGARTVFGIPGQHALGLFDALSRSPLEFVSNRVEN
+NAAFAADGYARATGEVGVLFLSTGPGALTSLAGLQEAYATGVPMLVVASQIPLSGLGARR
+KGMLHQLDDQKASARNVTKAQFTVHHASGIPSAIQDAWAEAITVPQGPVWVEIPQDVLLG
+EVMVPPVEDALAVPYDHPPRAELVAESARWLRGAGRVAIVAGGGVRRSGRAAMESLREVA
+ELLQAPVVCSPGGNTAFPWEHLLSLGGWVEDRLVTDLLEDAEVLLVVGSSLGEVTSNYFT
+LEPRGRLIQVDAEPRVLETNHPTLGVRADAGQALEALAAALRESGSVAQDAAVWHGRTPA
+EVVADVNARITARLDAQDLGVERRLLADIRAAVPSTMQTYWDMTIAAYWAWNCWDAQDGE
+FHSAQGAGGLGYGFPAAFGGAVGLAHQGRTGIDGRVLAVAGDGSAMYSLAELAAARQHGA
+AVTWLIIDDGGYGILREYMEGAFGKATATELDRPDFQALAASFGVPAETVGVEDVRGALE
+RAFQADGPNVVVVQTRLAMWAPSHLGEAPEV
+>4_371
+MTDEQTTTAAPRRNGGDLAVETLHALGARTVFGIPGQHALGLFDALSRSPLEFVSNRVEN
+NAAFAADGYARATGEVGVLFLSTGPGALTALAGLQEAYATGVPMLVIASQIPLSGLGARR
+KGMLHQLDDQKASARNVTKAQFTVHHASGIPSAIQDAWAEAVTVPQGPVWVEIPQDVLLG
+EVMVPPVEDALAVPYDHPPRAELVAESVRWLRGAGRVAIVAGGGVRRSGRAAMESLREVA
+ELLQAPVVCSPGGNTAFPWGHPLSLGGWVEDRLVTDLLEDAEVLLVVGSSLGEVTSNYFT
+LEPRGRLIQVDAEPRVLETNHPTLGVRADAGQALEALAAALRESGSVAQDAAVWHGRTPA
+EVVADVNARITARLDAQDLGVERRLLADIRAAVPSTMQTYWDMTIAAYWAWNCWDAQDGE
+FHSAQGAGGLGYGFPAAFGGAVGLAHQGRTGIEGRVLAVAGDGSAMYSLAELAAARQHGA
+AVTWLIIDDGGYGILREYMEGAFGKATATELDRPDFQALAASFGVPAETVGVEDVRGALE
+RAFQADGPNVVVVQTRLAMWAPSHLGEAPEV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000172.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000172.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5113c8c8f5b4cebbe9748bae0f5971f2160f3e03
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000172.fa
@@ -0,0 +1,41 @@
+>1_589
+MGSHHHAPTGHRGRLAIAFGITTAVLLAEVVGAVLTGSLALLVDAAHMLTDAGGLLMALL
+AATLMARPPTTRRTWGFLRAEVLAALAQAAVLLAVGTYAFIEGLQRLFAPPEVASGPLLA
+FGILGLVGNLASLAVLGSGRGANLNMRAAFLEVLNDALGSVAVIASALVIAATGWTRADA
+VAGMLIAVLIVPRTLKILGETTRILLESTPRGLDLAEVRTHLQALPHVVSVHDLHASQIA
+TGVPVLSAHIVVEDSCFHDGHAPQILDQLQHCVAEHFDVGVDHSTFQLEPAAHAHHEHPT
+HH
+>2_527
+MSTPHEHHHDHAHGPSPEEAAADPALRRRLWIALALAGTVVLAQAVGAALTGSLALLTDT
+AHAVTDASGLAVALVAAILMARPATPRRTWGLRRLEVVAALGQAALLLLVGAYSAVEAVR
+RLVEPPAVDGTGMLLFGVLGLAANLAAAAVLASSRGANLSMRAAFLEVVNDALGSLGVIA
+AAAVVAVTGWTRADAVAGLLIVVLIVPRAVSLLRQTLRVLLEFTPEGLDLDEVRTHLLEV
+EHVLEVHDLHASTVATGLPVLTAHVVVEDGCFTDGHAAQILEQLRECTREHFPLAVPHST
+FQLETAAIAADDAHHTAHP
+>2_685
+MGAGHNHGPAASETGHPGDFRKKLWIAFSITATIVVAQAMGSVITGSLALLTDTAHAITD
+ASGLLVALIAATLMLKPANSKRTWGFRRIEVIAALGQSALLLAVGTYAAIEGIRRLFEPP
+EVPASELLIFGIIGLVANIIAITILASSRGSNFNMRAAFLEVLNDALGSLGVIIAAIVIA
+TTGFMQADAIAGLLIAALIVPRAFKLMRETTGVLMEFTPKGLDLDKVRSHILELDHVKDV
+HDLHASTVATGLPILTAHVVVEDECFTDGRAAQTLHEIKDCVAGHFEVSIHHSTFQIETE
+HIAEHEPEISKHD
+>3_310
+MVFSITATIMVAEVIGALASGSLALLADAGHMFTDSAGLLIALTATTLALRPATDKRTWG
+YKRAEIIAAAAQAAVLLAVGGFVAVEGVRRLIEPPEVESTAMLWFGVIGLAGNLIGLAIL
+ASSRGENLNMKAAFLEVLNDALGSVAVIVSAIVIATTGWNRADAVVSLLIAALIVPRALI
+LLRDTIDVLMETTPKGLDLEAVRIRLSELPHVLEVHDLHASRIDSDTPVLSAHVTVHNGC
+LTAAHLGTVLTDLQRCVAQDFQVPIEHSTFQIEPATHPHTETLHP
+>3_1724
+MGAHHHASPAHRWRLAVAFAITTAVLLAEVAGALITGSLALLVDAAHMLTDAGGLLMALL
+ASTLMARPPTARRTWGFLRAEVLAALAQAAILLAVGLYAFIEGLQRLFAPPEVASGPLLL
+FGILGLAGNLASLAVLGSGRGANLNMRAAFLEVLNDALGSVAVIASALVIATTGWAQADA
+VAGMLIAVLIVPRTLKILAEAAHILLESTPRDLDLAEVRDHLEAVPHVVSVHDLHASQIA
+TGVPVLSAHVVVEDHCFHDGHAPQILDQLQHCVAEHFDVAIDHSTFQLEPAAHAHHEHPT
+HH
+>4_1947
+MSGHDHSHALPAAGRRGRLAVVFSITATIMVAEVIGALASGSLALLADAGHMFTDSAGLL
+IALTAATLALRPATDKRTWGYKRAEIIAAAAQAAVLLAVGGFVAVEGVRRLIEPPEVEST
+AMLWFGVIGLAGNLIGLAILASSRGENLNMKAAFLEVLNDALGSVAVIVSAIVIATTGWN
+RADAVVSLLIAALIVPRALILLRDTIDVLMETTPKGLDLEAVRIRLSELPHVLEVHDLHA
+SRIDSDTPVLSAHVTVHNGCLTAAHLGTVLTDLQRCVAQDFQVPIEHSTFQIEPATHPHT
+ETLHP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000175.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000175.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5a2068e52ca8cce027a5767b5299ddd3b28f7195
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000175.fa
@@ -0,0 +1,65 @@
+>0_1
+MSNSKQAAQSTPVPDVRLQTVTGRIPVTGVQPVVQDGRFPAKAVVGEDIPVRATVFGEGH
+DAVRATVRLLDPSGAEVQRVHMRPGRPGLDEFLATLRPSETGVHHFVVEGWHDPVGTWLH
+AATVKLAAGVDVELMLAEGAALFRAAAEDAERSAQDRAAFEETARVLADEGLVPAQRLAG
+AESAELAAVLGARPLREHVTSSELLPLDVQRELAGRGGWYEFFPRSEGARFDEAAGTWSS
+GTFTTAARRLPAVARMGFQVVYLPPIHPIGTAHRKGPNNTLTAGPQDPGSPWAIGAAEGG
+HDAVHPDLGTIADFEDFVAAAADEGLEVALDLALQCSPDHPWVAEHPEWFTTRVDGTIAY
+AENPPKKYQDIYPLNFDNDPEGLAQAVLEVVQGWVGRGVHIFRVDNPHTKPLWFWEWLIA
+RVRAEEPRVVFLAEAFTRPAMMHALGTVGFQQSYGYFTWRNTAAELAEYLEEISHETPAF
+YRPNFFVNTPDILTEYLQHGGPGAFRIRAVVAALANPLWGVYAGYELFEHVARPGAEESI
+DNEKYEYRPRDWEGAEAAGASLAPYLTRLNEIRAAHPALRDLQNLTLHRSTHQDLLVFSK
+TRTARPEGEHRDAEAVTDAGAHEDTVITVVTVNPHHVAEATLDLDLSALRLRPEDLDESG
+SFEVEDLLTGQRWRWGRTPYVRLDPHVEPAHVLRVVRHG
+>1_316
+MKPDTQSATAADVRLQTVTGRIPVTDVQPVVLDGRFPAKAVVGEDIPVRATVFREGHDSV
+RATVRLLDPAGAEVQRVQMRPGRPGLDEVVATLRPAEPGLHQFVVEGWDDPVGTWKHAAT
+VKIAAGIDVELMLAEGAALFRRAAEDAERSAEDRAVFEEVVRGLEDESLIPAQRLASAES
+AEVSAVLHARPVREHLTSSELYPLDVQRELAGRGAWYEFFPRSEGARFDEASGTWSSGTF
+ATAADRLPAVARMGFQVVYLPPIHPIGTTHRKGPNNTLTAGPQDPGSPWAIGGPEGGHDA
+AHPDLGTVEDFEAFVAAAADEGLEVALDLALQCSPDHPWVTAHPEWFTTRVDGTIAYAEN
+PPKKYQDIYPLNFDNDPDGLAQAVLDVVRGWVARGVHIFRVDNPHTKPLWFWEWLIAKVR
+AEEPRVVFLAEAFTRPAMMHALGKVGFQQSYGYFTWRNTAEELAEYLQEISHETPAFYRP
+NLFVNTPDILTEYLQHGGPGAFRIRAVVAATASPLWGVYAGFELFEHVARPGAEEYIDNE
+KYEYRPRDWEGAEAAGASLAPYLTRLNEIRAAHPALGDLQNLTLHASTHPDLLVFSKTRS
+ARPEGAHRDAEAVTDAGPAEDTLIVVVTTNPHDVAEATLDLDLEALRLRPEDRDASGAVE
+VEDLLTGQRWRWGRTPYVRLDPHVEPAHVLRIVRNG
+>2_2
+MSTSKPRPAAHPAPPAPALPDVRRTTLTGRIPVSNVQPTVEEGRFPAKAIVGEDVPVRAN
+VYREGHDAVRATVRLLGPDGAEVQRVHMRPGRPGLDEAVATLRPSEPGVHHFVVEGWDDP
+VGTWRHNASVKLAAGVDVELMLDEGAALFRAAAQDPERGAADRAVFEEAVRGLEDASLAP
+VQRFAVTQSAEVSAVLDARPVRRWVTSSELYPLDVQRPLAGRGAWYEFFPRSEGARYDEA
+AGLWHSGTFRTAAERLPAVAAMGFQVVYLPPIHPIGVAHRKGPNNTLTAGPQDPGSPWAI
+GGEAGGHDAIHPGLGTFEDFDAFQERVRELGMELALDLALQCSPDHPWVTEHPEWFTHRV
+DGSIAYAENPPKKYQDIYPLNFDDDADGLARAVLDVVLGWVRRGVHIFRVDNPHTKPLWF
+WEWLIREVRAVEPEVVFLAEAFTRPAMMHGLGRVGFQQSYGYFTWRNTREELEEYLEEIT
+AETAGFYRPNFFVNTPDILTDYLQHGGPGAFKARAVIAATSNPLYGVYAGFELFEHVARP
+GAEEYIDNEKYEFRPRDWAGEEAAGRSLAPYLTRLNRIRAEHPALQDLQNLTLHSATDPE
+LLVFSKTRSALPEGDHRDAAAVTDAGSAEDTVVVVVACDPHRVAEATLRLDAEALRVRPE
+DRDEEGRFEVEELLTGARWRWDEQPYVRLDPAVEPAHVLRVVRRG
+>3_41
+MKPDTQSATAADVRLQTVTGRIPVTDVQPVVLDGRFPAKAVVGEDIPVRATVFREGHDSV
+RATVRLLDPAGAEVQRVQMRPGRPGLDEVVATLRPAEPGLHQFVVEGWDDPVGTWKHAAT
+VKIAAGIDVELMLAEGAALFRRAAEDAERSAEDRAVFEEVVRGLEDESLIPAQRLASSES
+AEVSAVLHARPVREHLTSSELYPLDVQRELAGRGAWYEFFPRSEGARFDEASGTWSSGTF
+GTAADRLPAVARMGFQVVYLPPIHPIGTTHRKGPNNTLTAGPQDPGSPWAIGGPEGGHDA
+VHPDLGTVEDFEAFVAAAADEGLEVALDLALQCSPDHPWVTAHPEWFTTRVDGTIAYAEN
+PPKKYQDIYPLNFDNDPDGLAQAVLDVVRGWVARGVHIFRVDNPHTKPLWFWEWLIAKVR
+AEEPRVVFLAEAFTRPAMMHALGKVGFQQSYGYFTWRNTAEELAEYLQEISHETPAFYRP
+NLFVNTPDILTEYLQHGGPGAFRIRAVVAATASPLWGVYAGFELFEHVARPGAEEYIDNE
+KYEYRPRDWEGAEAAGASLAPYLTRLNEIRAAHPALGDLQNLTLHASTHPDLLVFSKTRS
+ARPEGAHRDAEAVTDAGPAEDTLIVVVTTNPHDVVEATLDLDLEALRLRPEDRDASGAVE
+VEDLLTGQRWRWGRTPYVRLDPNVEPAHVLRVVRNG
+>4_323
+MKPDTQSATAADVRLQTVTGRIPVTDVQPVVLDGRFPAKAVVGEDIPVRATVFREGHDSV
+RATVRLFDPAGAEVQRVQMRPGRPGLDEVVATLRPAEPGLHQFVVEGWDDPVGTWKHAAT
+VKIAAGVDVELMLAEGAALFRRAAEDAERSAEDRAVFEEVVRGLEDESLIPAQRLASAES
+AEVSAVLHARPVREHLTSSELYPLDVQRELAGRGAWYEFFPRSEGARFDEASGTWSSGTF
+ATAAGRLPAVARMGFQVAYLPPIHPIGTTHRKGPNNTLTAGPQDPGSPWAIGGPEGGHDA
+VHPDLGTVEDFEAFVAAAADEGLEVALDLALQCSPDHPWVTAHPEWFTTRVDGTIAYAEN
+PPKKYQDIYPLNFDNDPGGLAQAVLDVVRGWVARGVHIFRVDNPHTKPLWFWEWLIAKVR
+AEEPRVVFLAEAFTRPAMMHALGKVGFQQSYGYYTWRNTAEELAEYLQEISHETPAFYRP
+NLFVNTPDILTEYLQHGGPGAFRIRAVVAATASPLWGVYAGFELFEHVARPGAEEYIDNE
+KYEYRPRDWEGAEAAGASLAPYLTRLNEIRAAHPALGDLQNLTLHASTHPDLLVFSKTRS
+ARPEGAHRDAEAVTDAGPAEDTLIVVVTTNPHDVVEATLDLDLEALRLRPEDRDASGAVE
+VEDLLTGQRWQWGRTPYVRLDPHVEPAHVLRIVRNG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000177.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000177.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8344c3dcb4c47e15dbc50149f168faecce158fe5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000177.fa
@@ -0,0 +1,33 @@
+>0_7
+MDGADVDGTADAVTEPALLHAEALECGYAGVPVTGRLDLVVRPGERVGVVGANAAGKSTV
+LRTLVGDQEPVAGRVRLEGLPVLPESAAHRRALSVLTDEDAYFPTLTVAEHLTLVALGHG
+VPEPDRVVDRELDFFALREAADAPPSRLSSGQRRRLLLAAALLRPFRLLALDEPEQRLDA
+GMRERLTARLAALEPASALVLVTHDPDVLAGAATRCLIVDGRVREAAVAEGAAWIRERT
+>0_2530
+MQNTTLLPAPTAVDSRTETIVEIHDLRVDYGDFTAVDGIDLEIRRGEFFGLLGTNGAGKT
+TTIEIMEGHRAPTAGSVRVLGQDPSDRTLRRRVGIMLQESGFAPDLTVRETLALIGRLTR
+RDDDVDRVLDLVDLRRRRDTRTGQLSGGEKRRLDFATAIFGSPELIFLDEPTTGLDIEAR
+DALWHVVDRLRDEGATILLTTHYLEEAQERADRIALMHSGRIHRQGTVAELTSAFPSTIS
+FRLSGELTVPFEDATIAPGGAVTIPTTNLQEDLYRLLVWSRSRDVELEGLNVGAEGLESL
+FRALNA
+>1_356
+MQNTTLLPAPTAVDSRTETIVEIHDLRVDYGDFTAVDGIDLEIRRGEFFGLLGTNGAGKT
+TTIEVMEGHRAPTAGSVRVLGQDPSDRTLRRRVGIMLQESGFAPDLTVRETLALIGRLTR
+RDDDVDRVLDLVDLRRRRDTRTGQLSGGEKRRLDFATAIFGSPELIFLDEPTTGLDIEAR
+DALWHVVDRLRDEGATILLTTHYLEEAQERADRIALMHSGRIHRQGTVAELTSAFPSTIS
+FRLSGEPTVPFEDATIAPGGAVTIPTTNLQEDLYRLLVWSRSRDVELEGLNVGAEGLESL
+FRALNA
+>2_1156
+MSNAPALATRGLTRRFGPVRAVDGVDLTVPAGEVLALLGPNGAGKTTLLDMALGFSPPSD
+GTVRILGSDPVAAVRQGRVGAVLQTGGLLEDLSVRETVAMVAGCHRRHIGVSAALERAGL
+TGLAGRRVKKCSGGERQRLRFALALLTDPELLILDEPTAGMDVRARHDFWDTMHAEADRG
+RTIVFATHFLPEAEDFADRIVLMREGRIHADGTPAELATGGSVTLTGRWAGGGGDPDAPA
+RLAAALGLPRDAVQLEPQHLSPGRLRVRVPAGGRVTGDDVARHLLNERLVEDLAITHASL
+DDVFLSLTDAGQSAPSEPQESLA
+>4_362
+MQNTTLLPAPTAVDSRTETIVEIHDLRVDYGDFTAVDGIDLEIRRGEFFGLLGTNGAGKT
+TTIEVMEGHRAPTAGSVRVLGQDPSDRTLRRRVGIMLQESGFAPDLTVRETLALIGRLTR
+RDDDVDRVLDLVDLRRRRDTRTGQLSGGEKRRLDFATAIFGSPELIFLDEPTTGLDIEAR
+DALWHVVDRLRDEGATILLTTHYLEEAQERADRIALMHSGRIHRQGTVAELTSAFPSTIS
+FRLSGEPTVPFEDATIAPGGAVTIPTTNLQEDLYRLLVWSRSRDVELEGLNVGAEGLESL
+FRALNA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000182.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000182.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e3a5261f25c55adbb0a7b550a3031d593355e72a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000182.fa
@@ -0,0 +1,25 @@
+>0_12
+MSRILIVEDEESFSDPLSYLLEKEGFEVAVAADGNEALGVFERDGADLILLDLMLPGMSG
+TEVCRQVRQRSNVPVIMLTAKDSEIDKVVGLELGADDYVTKPYSSRELVARVRAVLRRQG
+EPEELVSATLGAGPVRMDVERHVVSVDGEQVSLPLKEFELLEMLLRNAGRVLTRGQLIDR
+VWGSDYVGDTKTLDVHVKRLRSKIEPDPSSPRHLVTVRGLGYKFEA
+>1_307
+MSRILIVEDEESFSDPLSYLLEKEGFEVTVAADGNEALSVFERDSADLILLDLMLPGMSG
+TEVCRQVRQRSNVPVIMLTAKDSEIDKVVGLELGADDYVTKPYSSRELVARVRAVLRRQG
+EQEEPMSATISAGPVRMDVERHVVSVDGEQVSLPLKEFELLEMLLRNAGRVLTRGQLIDR
+VWGSDYVGDTKTLDVHVKRLRSKIEPDPSSPRYLVTVRGLGYKFEA
+>2_8
+MSRILIVEDEESFSDPLSYLLNKEGFEVAVAADGNDALEEFERGGADLILLDLMLPGMSG
+TEVCRQIRQRSHVPIIMLTAKDSEIDKVVGLELGADDYITKPYSSRELVARVRAVLRRGG
+EPEELVTSTVSAGPVRMDVERHVVAVDGEPVNLPLKEFELLEMLLRNAGRVLTRGQLIDR
+VWGSDYVGDTKTLDVHVKRLRAKIEPDPSSPRHLVTVRGLGYKFES
+>3_31
+MSRILIVEDEESFSDPLSYLLEKEGFEVTVAADGNEALSVFERDSADLILLDLMLPGMSG
+TEVCRQVRQRSNVPVIMLTAKDSEIDKVVGLELGADDYVTKPYSSRELVARVRAVLRRQG
+EQEEPMSATISAGPVRMDVERHVVSVDGEQVSLPLKEFELLEMLLRNAGRVLTRGQLIDR
+VWGSDYVGDTKTLDVHVKRLRSKIEPDPSSPRYLVTVRGLGYKFEA
+>4_314
+MSRILIVEDEESFSDPLSYLLEKEGFEVTVAADGNEALSVFERDSADLILLDLMLPGMSG
+TEVCRQVRQRSNVPVIMLTAKDSEIDKVVGLELGADDYVTKPYSSRELVARVRAVLRRQG
+EQEEPMSATISAGPVRMDVERHVVSVDGEQVSLPLKEFELLEMLLRNAGRVLTRGQLIDR
+VWGSDYVGDTKTLDVHVKRLRSKIEPDPSSPRYLVTVRGLGYKFEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000188.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000188.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f3291ca2cb393850d7371894f6409dfd7c615873
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000188.fa
@@ -0,0 +1,40 @@
+>0_19
+MTALPDAVPAVFADLAGQGSAVEQLRRAAAEDRPTHAWMFTGPPGSGRSTAARAFAAALQ
+CEAPDPAARGCGRCHACRTVLAGTHPDVTVLATEAVTYRIEDVRSLVEAAQSTPATGRWR
+IFLMEDADRMTERATNVLLKAVEEPPARTVWMLCTPSPADVLPTVRSRCRLVTLSIPAVE
+DVADLLHRRDGLDRETALTTARISQSHVGMARRLARDPEALERRERILSLPLEATSVSDA
+MALAATLADVSKAEAESSAEARDAEELETLRRSLGLEPGEPVPPKLRQHVKRLEEDQTRR
+RRRSVRDSLDRAMIDVMGLFRDVLRVQLGAEGELINEHRRAEVEAYARGAAGDSAEVLAR
+IDAVATARERIAANVPEQLALEAMMLALLPRRVRTPRRR
+>1_300
+MTASAPVPPVFADLAGQEAAVAQLRRAAAEDRPTHAWMFTGPPGSGRSTAARAFAAALQC
+EVADPAARGCGECHACRTVLGGTHPDVTVLATEAVSYRIEDVRALVEAGQSTPATGRWRI
+FLMEDADRMTERATNVLLKAIEEPPARTIWMLCTPSPADVLPTVRSRCRLITLSIPAVEQ
+VAELLHRRDGLDRETALTTARISQSHVGMARRLARDPEALERRERILSLPLQATAVSDAM
+ALAATLAEVSKAEAESAAEARDAEELEALRRSLGLEPGEPVPPKLRHHVKRLEEDQTRRR
+RRAVRDSLDRAMIDVMGLFRDVLRVQLGADGELINEHRRDEIEAYARGTAGDSAEVLARI
+DAVTTTRERIAANVPEQLALEAMMLALLPRRVRTPRRR
+>2_15
+MTGAPDVYSDLAGQDAAVAQLRRAATEDRPTHAWLFTGPPGSGRSTAARAFAAALQCEQP
+DPANRGCGACHACRTVLGGTHPDVTVLATEAVSYRIEDVRALVEAAQSTPATGRWRIFLM
+EDADRMTERATNVLLKAIEEPPPRTIWMLCSPSPADVLPTIRSRCRLVTLRIPAPEDVAA
+LLHRRDGLDEATALMTARISQSHVGMARRLARDPEALARREDVLSLPLQATAVSDAMAMA
+ARLAEVSHAEAESSAAARDAEELAALRRQLGVAEGEAVPPKLRQQVKRLEEDQSRRRTRV
+TRDALDRAMIDVIGLFRDVLRVQLGAGGDLVNEHRRAEIERYAAGAAGSSAEVVARIDAV
+HLARERLGQNVPEQLALEAMMLALLPARVRTPRGRR
+>3_24
+MTAPAPAVFADLAGQEAAVAQLRRAAAEDRPTHAWMFTGPPGSGRSTAARAFAAALQCEV
+ADPAARGCGECHACRTVLGGTHPDVTVLATEAVSYRIEDVRALVEAGQSTPATGRWRIFL
+MEDADRMTERATNVLLKAIEEPPARTIWMLCAPSPADVLPTVRSRCRLITLSIPAVEQVA
+ELLHRRDGLDRETALTTARISQSHVGMARRLARDPEALERRERILSLPLQATAVSDAMAL
+AATLAEVSKAEAESAAEARDAEELEALRRSLGLEPGEPVPPKLRHHVKRLEEDQTRRRRR
+AVRDSLDRAMIDVMGLFRDVLRVQLGADGELINEHRRDEIEAYARGAAGDSAEVLARIDA
+VTTARERIAANVPEQLALEAMMLALLPRRVRTPRRR
+>4_307
+MTAPAPAVFADLAGQEAAVAQLRRAAAEDRPTHAWMFTGPPGSGRSTAARAFAAALQCEV
+ADPAARGCGECHACRTVLGGTHPDVTVLATEAVSYRIEDVRALVEAGQSTPATGRWRIFL
+MEDADRMTERATNVLLKAIEEPPARTIWMLCAPSPADVLPTVRSRCRLITLSIPAVEQVA
+ELLHRRDGLDRETALTTARISQSHVGMARRLARDPEALERRERILSLPLQATAVSDAMAL
+AATLAEVSKAEAESAAEARDAEELEALRRSLGLEPGEPVPPKLRHHVKRLEEDQTRRRRR
+AVRDSLDRAMIDVMGLFRDVLRVQLGADGELINEHRRDEIEAYARGAAGDSAEVLARIDA
+VTTARERIAANVPEQLALEAMMLALLPRRVRTPRRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000199.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000199.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b3edf425bd82361b51f87424a8281d2b16fbbf16
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000199.fa
@@ -0,0 +1,20 @@
+>0_49
+MKLNAYTDVCLRVLMTLAGDEGERLTSQQIADRIQVPYNHVIKAVAELRRRGAIDVARGR
+LGGATIAEAGLELRVGALVRDLAGWDEVIDCTGRESGVACPLAGDCRLRGALHRAREAFL
+AELDAVRVRDLVAAGPAAGPVLLGLPEIPLPADPRPRRRTCPAGA
+>1_287
+MKLSAYTDVCLRVLMTLAAAEGERLTSQQIADRIQVPYNHVIKAVAELRRRGTIQVARGR
+LGGARITEAGLDQRVGELVRDLSPRAEVLDCAGHETGVPCPFAADCRLREALARAREAFM
+AELDLLTVRDLVRPGRAGATGPVSLGLPAMGSHAATV
+>2_27
+MKLTAFTDVCLRVLMTLGRDAGAKMTSQEIADRIGVPYNHVVKAVGELRRRGLVDVARGR
+AGGAVITEAGLDQRVGELVRALSGRPEVVDCEGLESGTPCPLLEACSLRGALARAREAFF
+AELDRQRVRDLVSLPAEFLGLRRLPGA
+>3_4
+MKLSAYTDVCLRVLMTLAAAEGERLTSQQIADEIHVPYNHVIKAVAELRRRGTIEVLRGR
+HGGAMIAAAGLDQRVGELVRTLSSRDEVIDCAGRDSGVACPYAGDCRLRGALHRAREAFL
+AELDTLRIRDLVSAGPVGGPVLLGLPEIPVTH
+>4_294
+MKLSAYTDVCLRVLMTLAAAEGERLTSQQIADRIQVPYNHVIKAVAELRRRGTIEVLRGR
+HGGAMIAAAGLDQRVGELVRSLSSRDEVIDCTGRDSGVACPYAGDCRLRGALHRAREAFL
+AELDTVQIRDLVSAGPVGGPVLLGLPEIPVAH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000200.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000200.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b6479afc5fa511e6fea4bc09f065afa0772076e6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000200.fa
@@ -0,0 +1,60 @@
+>0_51
+MADNATTSFADRALQDAPTDYAQLREWVAQVAELTQPDAVQWVDGSEEEYARLADELVAA
+GTLTRLAEDKFPNSFAAFSDPADVARVEDRTFICSEKEEDAGFTNNWMDPEKMHGILDDV
+FAGSMRGRTMYVIPFVMGHLDAEDPKYGVELTDSAYVVLSMRIMARIGQDVLDKMSREQA
+FYVPAVHSVGAPLEPGQEDVPWPCNSTKWIVHFPEERSIWSFGSGYGGNALLGKKCYALR
+IASVMARDEAWLAEHMLILKLTSPEGRSYHITGAFPSACGKTNLALIDPTIEGWKAETLG
+DDITWIRAGKDGEFRVINPETGYFGVAPGTGWSTNPNAMRAIAKGNSIFTNVALTDDGGV
+WWEGMTDEVPEHLTDWRGNDWTPASETPAAHPNSRFCTPIEQTDMLADEYRDPKGVKLDA
+ILFGGRRKTTVPLVTESFDWEDGILKAATLSSETTAAAAGAVGVVRRDPMAMLPFLGYDA
+GDYLAHWVEESGKADPEKLPRIYLVNWFRRNRDGGFAWPGFGENSRVLKWVVERLEGRAD
+AVETPIGHVPSPEALDLTGIDVSAEDLEDALKVDAEEWAKENELIEEWLGRFGESLPAMV
+RERFEAQKERFARA
+>1_285
+MADNATTSFADRALADAPTDYAQLREWVAQIAELTQPDSVQWVDGSEEERDRLADELVAA
+GTLTRLAEDKFPNSFAAFSDPADVARVEDRTFICSEKEEDAGFTNNWMDPAKMHGILDDA
+FTGAMRGRTMYVIPFVMGHLDAEDPKYGVEITDSAYVVLSMRIMARIGQDVLDKMSREQA
+FYVPAVHSVGAPLEPGEQDVPWPCNETKWIVHFPEERSIWSFGSGYGGNALLGKKCYALR
+IASVMARDEAWLAEHMLILKLTNPEGRSYHITGAFPSACGKTNLALIDPTIEGWKAETLG
+DDITWIRAGKDGEFRVINPETGYFGVAPGTGWSTNPNAMRAISKGNSIFTNVALTDDGGV
+WWEGMTDEVPEHLTDWRGNDWTPEFGTPAAHPNSRFCTPIEQTDMLADEYRDPRGVKLDA
+ILFGGRRKTTVPLVTEAFDWEDGILKGATLSSETTAAAAGAVGVVRRDPMAMLPFLGYDA
+GDYLAHWVRESGKADPEKLPRIYLVNWFRRNRDGGFAWPGFGENSRVLKWVVERLEGKAE
+AEETPIGLVPAAGSLDLSGIEVSAEDLEDALKVDAAEWAEENELIEQWLGRFGESLPAVV
+RERFEAQKARFAQA
+>2_29
+MADNATTSFTELATKDAPTDYAQLREWVAGIAELTQPDAVHWVDGSQEEYDRLAAELVAA
+GTLTKLNEKKLPNSYAAFSDPADVARVEDRTFICSEKEEDAGFTNNWMDPKEMHGILDDA
+FAGSMRGRTMYVIPFVMGHLDAEDPKYGVEITDSAYVVLSMRIMARIGQDVLDKMSREQA
+FYVPAVHSVGAPLEPGEQDVPWPCNETKWIVHFPEERSIWSFGSGYGGNALLGKKCYALR
+IASVMARDEAWLAEHMLILKLTNPEGRSYHITGAFPSACGKTNLALIDPTIEGWKAETLG
+DDITWIRAGKDGEFRVINPETGYFGVAPGTGWSTNPNAMRAISKGNSIFTNVALTDDGGV
+WWEGMTDEVPEHLTDWRGNDWTPESGTPAAHPNSRFCTPIEQTDMLADEYRDPRGVKLDA
+ILFGGRRKTTVPLVTEAFDWEDGILKGATLSSETTAAAAGAVGVVRRDPMAMLPFLGYDA
+GDYLAHWVKESGKADPEKLPRIYLVNWFRRNRDGGFAWPGFGENSRVLKWVVERLEGKAG
+AEETPIGLVPAAGSLDLSGIEVSAEDLEDALKVDAAEWAEENELIEEWLGRFGESLPQAI
+RDRFEAQKARFAQA
+>3_2
+MADNATTSFADRALADAPTDYAQLREWVAQIAELTQPDSVQWVDGSEEERDRLADELVAA
+GTLTRLAEDKFPHSFAAFSDPADVARVEDRTFICSEKEEDAGFTNNWMDPAKMHGILDDA
+FTGAMRGRTMYVIPFVMGHLDAEDPKYGVEITDSAYVVLSMRIMARIGQDVLDKMSREQA
+FYVPAVHSVGAPLEPGEQDVPWPCNETKWIVHFPEERSIWSFGSGYGGNALLGKKCYALR
+IASVMARDEAWLAEHMLILKLTNPEGRSYHITGAFPSACGKTNLALIDPTIEGWKAETLG
+DDITWIRAGKDGEFRVINPETGYFGVAPGTGWSTNPNAMRAISKGNSIFTNVALTDDGGV
+WWEGMTDEVPEHLTDWRGNDWTPESGTPAAHPNSRFCTPIEQTDMLADEYRDPRGVKLDA
+ILFGGRRKTTVPLVTEAFDWEDGILKGATLSSETTAAAAGAVGVVRRDPMAMLPFLGYDA
+GDYLAHWVRESGKADPEKLPRIYLVNWFRRNRDGGFAWPGFGENSRVLKWVVERLEGKAE
+AEETPIGLVPAAGSLDLSGLEVSAEDLEDALKVDAAEWAEENELIEEWLGRFGESLPQAI
+RDRFEAQKQRFAQA
+>4_292
+MADNATTSFADRALADAPTDYAQLREWVAQIAELTQPDSVQWVDGSEEERDRLADELVAA
+GTLTRLAEDKFPNSFAAFSDPADVARVEDRTFICSEKEEDAGFTNNWMDPAKMHGILDDA
+FTGAMRGRTMYVIPFVMGHLDAEDPKYGVEITDSAYVVLSMRIMARIGQDVLDKMSREQA
+FYVPAVHSVGAPLEPGEQDVPWPCNETKWIVHFPEERSIWSFGSGYGGNALLGKKCYALR
+IASVMARDEAWLAEHMLILKLTNPEGRSYHITGAFPSACGKTNLALIDPTIEGWKAETLG
+DDITWIRAGKDGEFRVINPETGYFGVAPGTGWSTNPNAMRAISKGNSIFTNVALTDDGGV
+WWEGMTDEVPEHLTDWRGNDWTPESGTPAAHPNSRFCTPIEQTDMLADEYRDPRGVKLDA
+ILFGGRRKTTVPLVTEAFDWEDGILKGATLSSETTAAAAGAVGVVRRDPMAMLPFLGYDA
+GDYLAHWVRESGKADPEKLPRIYLVNWFRRNRDGGFAWPGFGENSRVLKWVVERLEGKAE
+AEETPIGLVPAAGSLDLSGLEVSAEDLEDALKVDAAEWAEENELIEEWLGRFGESLPQAI
+RDRFEAQKQRFAQA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000204.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000204.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a834aa4f0e053551381a63f9fef9771ba24c8b21
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000204.fa
@@ -0,0 +1,20 @@
+>0_55
+MGLALDAARAAGEAGDVPIGAVLVAGDGTVLAAVGNEREQHHDPTAHAEVLALRRGARAL
+AEAGEADGWRLSDCTLVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVLDVVRDP
+RFNHAVQVRAGVRAEESAALLRGFFAVQRG
+>1_281
+MGLALRAARAAGAAGDVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALRRGAELR
+AAAGAGDGWRLTDCTLVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVLDVVRDP
+RFNHQVQVRAGVRSEESAALLRGFFAAQRD
+>2_34
+MGLALDAARTAGEAGDVPIGAVLVDGDGRVLAAVGNEREQHHDPTAHAEVLALRRGAAAL
+AARGDADGWRLAECTLVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVLDVVRDP
+RFNHTVQVRAGVRGDECAALLVDFFAARRPGG
+>3_2255
+MGLALRAARAAGAAGDVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALRRGAELR
+AAAGAGDGWRLTDCTLVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVLDVVRDP
+RFNHRVQVRAGVRSEESAALLRGFFAAQRD
+>4_288
+MGLALRAARVAGAAGDVPIGAALVAGDGTVLAVVGNEREQHHDPTAHAEVLALRRGAELR
+AAAGAGDGWRLTDCTLVVTLEPCPMCAGALLLARIPRVVFGAWDPKAGACGSVLDVIRDP
+RFNHQVQVRAGVRAEESAALLRGFFAAQRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000205.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000205.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4da5baa4a643d821dfc47eee3c6b73c2aa52624f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000205.fa
@@ -0,0 +1,40 @@
+>0_56
+MATSGRRGRLTRRAVLGLGAGALALGGGAAVANLAGVPPAPVGPDVNALFGMRSSTGHRY
+ADLPGRAGRVDVYRPQGPGPFPVVVWNAGSGWRDDRGYHDGQTVARGLVPHGYAVAAFSV
+RSSKQGRFPAQVEDATAAVRWVRAHAVELDLDASRLTVAGTSSGGWNALMAGLTGGRDLD
+RAHVPPPGREVPPGGHAIPEEDRVQAILDFFAPTDFLAMNAQMPPGACADYNRQRRLEHC
+HLDDHSTKSAMLGVPVLASYGLTRLASPIAHVRPDSPPMMIVHGLKDPTVPWRQSLELYE
+AAEAAGVRAAFYSVADAGHDLGMMGGGWGSAEVLRSGVPLSAVHATISWAAVAAFLDTVL
+PG
+>1_280
+MTSTARSPRVSRRAALGLGVGALAVGGVAVVTDLAGAPAGPLGANATALYGMRSSTGHTY
+ATLPGRAGRIDVYRPPGQGPFPVLVWNAGSGWRSDRGYSDGVDVARGLVPHGYAVAAFSV
+RSSKQGTFPAQVEDATAAVRWVRRNAPGLQLDAGRVAVAGSSSGGWNALMAGLTGGQDLD
+REQVPLPGREVPDGGHAIPEEDRVQAIVDFFGPTDFLTMNRQMLPGACADYNRANRLKHC
+HLDDRSTKSDMLGVPVLASGGLTRLASPIAHVRPDSPPLLVVHGRKDVTVPWGQSLELYR
+AAETAGLRTAFYSVAEGSHDLGMMTAKTRSAEVLRNGVPASAVHATISWSAVASFLDAVL
+PR
+>2_35
+MGGDTSTARAPRVRRRTLLGLGLGALAVGGTATALGHGSPVDSPALRQTMGALFGTTVIS
+GIVYADLPGAAGRMDLYLPEGEGPFPVLAWNAGSGWRSDRGFQGGDAVARGLVPAGHAVA
+AFSVRSAREDAFPAQVLDATAAVRHLRENAGELRVDPGRIAVGGNSSGGWNALMAGLTGG
+RDLDRSAVPAPGDEVPEGGHAIPEEDRVQAIVDCFAPVDFLQMNVQMPRGACEEYDRRNH
+TRHCHLDDASTKSRMLGAPVMARPELARLANPAVHVTPAAPPTLIVHGRADREVPYVQSR
+GLYQAYVGAGVPVAMYSVEGAGHDLQMMARRVGRTDVVRSGLPRQAVHGSISWSAVAAFL
+DVAMPRPRR
+>3_2253
+MTSTARSPRVSRRAALGLGVGALAVGGVAVVTDLAGAPAGPLGANATALYGMRSSTGHTY
+AALPGRAGRIDVYRPPGQGPFPVLVWNAGSGWRSDRGYSDGVDVARGLVPHGYAVAAFSV
+RSSKQGTFPAQVEDATAAVRWVRRNAPGLQLDAGRVAVAGSSSGGWNALMAGLTGGQDLD
+REQVPLPGREVPDGGHAIPEEDRVHAIVDFFGPTDFLRMNRQMLPGACADYNRANRLEHC
+HLDDHSTKADMLGVPVLASGGLTRLASPIAHVRPDSPPLLVVHGRKDVTVPWGQSLELYR
+AAEAAGLRTAFYSVAEGGHDLGMMTAKTRSAEVLRTGVPASAVHASISWSAVASFLDAVL
+PR
+>4_286
+MTSTARSPRVSRRAALGLGVGALAVGGVAVVTDLAGAPAGPLGANATALYGMRSSTGHTY
+AALPGRAGRIDVYRPPGQGPFPVLVWNAGSGWRSDRGYSDGVDVARGLVPHGYAVAAFSV
+RSSKQGTFPAQVEDATAAVRWVRRNAPGLQLDAGRVAVAGSSSGGWNALMAGLTGGQDLD
+REQVPLPGREVPDGGHAIPEEDRVHAIVDFFGPTDFLRMNRQMLPGACADYNRANRLEHC
+HLDDHSTKADMLGVPVLASGGLTRLASPIAHVRPDSPPLLVVHGRKDVTVPWGQSLELYR
+AAEAAGLRTAFYSVAEGGHDLGMMTAKTRSAEVLRTGVPASAVHASISWSAVASFLDAVL
+PR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000206.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000206.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9a4f4f37884a8e2db2cfb32b5c2e47903fb74903
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000206.fa
@@ -0,0 +1,20 @@
+>0_57
+MSVRVLAIGKKHEAWVSEGIDRYERRLKKPYDLSWRLLPHSARQEEAARTEESDRILGAV
+GADEHLILLDERGTAFDSPGLARHLQSRFDVGAPVTVVIGGAYGVDARVHARADRVWSLS
+PLVFPHQLVRLILAEQVYRAQEISAGRPYHHA
+>1_279
+MSVRVLAIGKKHEAWVVDGIDRYERRLKKPYDLSWRLLPHSARQEEAARTEESDRILGAV
+GADEHLILLDERGTAFDSPGLARHLQSRFDVGAPVTMVIGGAYGVDARVHARADRVWSLS
+PLVFPHQLVRLILAEQVYRAQEISAGRPYHHA
+>2_36
+MMVLMAVRVVAIGKRHESWVSEGITRYEKRLKKPWDLTWQLLPHSSRQEDAARAEESERI
+LAKVGPDEQLILLDERGRGFDSPGLSAHLQGQFDLGRTVTLVIGGAYGVDASVHARADRV
+WSLSGLVFPHQLVRLILAEQVYRAQEIAGGRPYHHA
+>3_2252
+MSVRVLAIGKKHEAWVVDGIDRYERRLKKPYDLSWRLLPHSARQEEAARTEESDRILGAV
+GADEHLILLDERGAAFDSPGLARHLQSRFDVGAPVTMVIGGAYGVDARVHARADRVWSLS
+PLVFPHQLVRLILAEQVYRAQEISAGRPYHHA
+>4_285
+MSVRVLAIGKKHEAWVVDGIDRYERRLKKPYDLSWRLLPHSARQEEAARTEESDRILGAV
+GADEHLILLDERGAAFDSPGLARHLQSRFDVGAPVTMVIGGAYGVDARVHARADRVWSLS
+PLVFPHQLVRLILAEQVYRAQEISAGRPYHHA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000214.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000214.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6c4fcafdc33a43b4690ce147b01b5f0c7b1a2cbd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000214.fa
@@ -0,0 +1,45 @@
+>0_78
+MPDTSPGPAPSSSSSGAPAHPSHFGFEVTHRLEAGGVDGAPLGRTGVISTPHGQIQTPAF
+IPVATQATVKAVLPESMAELGAQALLANAYHLYLQPGDDLLDEAGGLGAFMNWPGPTFTD
+SGGFQVMSLGSGFKKVIDMKGPSAPDGQGADDAVAPGKERLANVDDDGVWFKSHLTGDRH
+RFTPEVSVGIQHRLGADVMFAFDELTTLHNSRGYQEEALERTRRWAQRCLDEHARLTGVR
+AARPYQALFGVIQGAQYEDLRRKACRDLAAMRADFPSAGELDGVTSGFDGYGVGGALEKE
+NLGTIVGWCAQELPEDKPRHLLGISEPDDLFTAVENGADTFDCVSPTRVARTGAFYTRDG
+RFNLPGAKYRRDFGPLDPACDCYTCAHYSRAYIRHLFKAKEMVAHTLISIHNERFTVSLV
+DRIRAALQDGTYAELKEETLGRYYAPKG
+>1_261
+MPDTPQPPAVPAHPDHFGFEVTHRLETPGHDGAPLGRTGVITTPHGRIQTPAFIPVATQA
+TVKAVLPESMKDLGAQALLANAYHLYLQPGDDLLDEAGGLGAFMNWPGPTFTDSGGFQVM
+SLGSGFKKVIDMKGPGAPEGQGADDAVAPGKERLANVDDDGVWFKSHLTGDRHRFTPEVS
+VGIQHNLGADIMFAFDELTTLHNSRGYQEEALERTRRWAQRCLDEHARLTGVRAARPYQA
+LFGVIQGAQYEDLRRKACRDLAGMRAEFPAAGELDGVTSGFDGYGVGGALEKENLGTIVG
+WCAQELPEDKPRHLLGISEPDDLFTAVENGADTFDCVSPTRVARTGAFYTRDGRYNLPGA
+KYRRDFGPLDPECDCYTCAHYSRAYLRHLFKAKEMVAHTLLSIHNERFTVSLVDRIRAAM
+QDGTLAELKAETLGRYYAPKG
+>2_55
+MPETSAPGTAGPTSSSAVTSDPAHPDHLGFEVRERLDAPGADGIALGRTGVLRTPHGEIQ
+TPAFIPVATQATVKAVLPESMAELGAQALLANAYHLYLQPGDDLLDEAGGLGAFMNWPGP
+TFTDSGGFQVMSLGSGFKKVIDMKGPAAPEGQGADDAVAPGKERLANVDDDGVWFKSHLT
+GDRHRFTPERSLQIQHNLGADVMFAFDELTTLHNSRGYQEEALERTRRWAQRCLDEHARL
+TAERAGRPYQGLFGVIQGAQYEDLRRKACRDLSGMTAEFAAAGERPATAHGFDGYGIGGA
+IEKENLGTIVGWCAQELPEDRPRHLLGISEPDDLFRAVENGADTFDCVSPTRVARTGAFY
+TRDGRYNLPGATYKRDFGPLDPECDCYTCAHYSRAYLRHLFKAKEMVAHTLISIHNERFT
+VSLVDRIRASIQAGTFAELKAETLGRYYAPKG
+>3_2227
+MPDTPQPPAVPAHPDHFGFEVTHRLETGGADGAPLGRTGVITTPHGRIQTPAFIPVATQA
+SVKAVLPESMAELGAQALLANAYHLYLQPGDDLLDEAGGLGAFMNWPGPTFTDSGGFQVM
+SLGSGFKKVIDMKGPGAPEGQGADDAVAPGKERLANVDDDGVWFKSHLTGDRHRFTPEVS
+VGIQHNLGADIMFAFDELTTLHNSRGYQEEALERTRRWAQRCLDEHARLTGVRAARPYQA
+LFGVIQGAQYEDLRRKACRDLAGMRAEFPAAGELDGVTSGFDGYGVGGALEKENLGTIVG
+WCAQELPEDKPRHLLGISEPDDLFTAVENGADTFDCVSPTRVARTGAFYTRDGRYNLPGA
+KYRRDFGPLDPECDCYTCAHYSRAYLRHLFKAKEMVAHTLLSIHNERFTVSLVDRIRAAM
+QDGTLAELKAETLGRYYAPKG
+>4_259
+MPDTPQPPAVPAHPDHFGFEVTHRLETGGADGAPLGRTGVITTPHGRIQTPAFIPVATQA
+SVKAVLPESMAELGAQALLANAYHLYLQPGDDLLDEAGGLGAFMNWPGPTFTDSGGFQVM
+SLGSGFKKVIDMKGPGAPEGQGADDAVAPGKERLANVDDDGVWFKSHLTGDRHRFTPEVS
+VGIQHNLGADIMFAFDELTTLHNSRGYQEEALERTRRWAQRCLDEHARLTGVRAARPYQA
+LFGVIQGAQYEDLRRKACRDLAGMRAEFPAAGELDGVTSGFDGYGVGGALEKENLGTIVG
+WCAQELPEDKPRHLLGISEPDDLFTAVENGADTFDCVSPTRVARTGAFYTRDGRYNLPGA
+KYRRDFGPLDPECDCYTCAHYSRAYLRHLFKAKEMVAHTLLSIHNERFTVSLVDRIRAAM
+QDGTLAELKAETLGRYYAPKG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000218.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000218.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1b52edee044abac40c84483dd36b20a55ae71b39
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000218.fa
@@ -0,0 +1,25 @@
+>0_87
+MARMSTPAEDTLTALIHLLDREGYDAVTADQLAREAGMSRASFFRNLGGKEEVVFADHAT
+LLAHLEELLRGTGLGVREALDEAVLQVFRHHTRDPERAQARARLLRGSQALRTRELLTSH
+RYEELFSAWLADALPDTPARGGVAVGLAAAVVAVHNRALRAWLHSPDDDAEAGLRADLAE
+VVARLTAEPSAAERTLEAVRRLLG
+>1_258
+MARMTTPAEDTLTALIHLLDREGYDAVTADQLARQAGMSRASFFRHLGGKEEVVFADHAA
+LLARLDDFLRGTSLGVREALEEAVLQVFRHHTADPDRARARSRLLRGSQSLRTRELLTSH
+RYTELFSGWLATALPDTPARGGVAVGLAAAVVAVHNRALRAWLHAPADDAEAGLRADLAE
+VIARLTAEPAEAERTLAAVRRLLG
+>2_58
+MNPMTAVPEDTLTALIHLLDRQGYDDVTVDQLAREAGMSRASFFRHVGGKEEVVFADHEQ
+LLPRLEDLLHSTSLPLPTALREAGLQVFRHHVQHPERARARARLLRGSRALRTRELLASH
+RYEQLFSRWLAERLPDTPTRGSVAVGLAAAVVAVHNAALRGWLHAEAPDPTAAEAALGAQ
+LDEVILRLTREPGEAEVRLAAVRALLD
+>3_2222
+MARMTTPAEDTLTALIHLLDREGYDAVTADQLARQAGMSRASFFRHLGGKEEVVFADHAA
+LLARLDDFLRGTSLGVREALEEAVLQVFRHHTADPDRARARSRLLRGSQSLRTRELLTSH
+RYTELFSGWLATALPDTPARGGVAVGLAAAVVAVHNRALRAWLHAPADDAEAGLRADLAE
+VIARLTAEPAEAERTLAAVRRLLG
+>4_256
+MARMTTPAEDTLTALIHLLDREGYDAVTADQLARQAGMSRASFFRHLGGKEEVVFADHAA
+LLARLDDFLRGTSLGVREALEEAVLQVFRHHTADPDRARARSRLLRGSQSLRTRELLTSH
+RYTELFSGWLATALPDTPARGGVAVGLAAAVVAVHNRALRAWLHAPADDAEAGLRADLAE
+VIARLTAEPAEAERTLAAVRRLLG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000221.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000221.fa
new file mode 100644
index 0000000000000000000000000000000000000000..57f14038c0247a8308c434bde33e1c889a559582
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000221.fa
@@ -0,0 +1,22 @@
+>0_90
+MLEFLTGTGLATSAGLNAYIPMLALGLLDRFTGLVDLPAGWTWLSADASLWILGVLLLLE
+VVADKFPGVDAVNDAVQTVVRPAAGGIVFASGVGTETTAVHDPGTLFGGSGWVSVLIGAG
+IALAVHLAKAGTRVGANTVTVGAAAPVLSAAEDVSAAGLVAAALFLPVLVAVLVVAVVVG
+LWLLARRFRARRTRGRAAAAAGGSEWTA
+>1_255
+MLEFLTGTGLATSAGLNAYIPLLALGLLDRFTGLVDLPAGWTWLSADASLWILGALLALE
+LVADKIPGVDAVNDVVQTVVGADTVTVGAAAPVLSAAEDVSAAGLVAAALFLPVLVAVLV
+VAVVVGLWLLARRFRARRTRGRAAAVPGGPEWTA
+>2_61
+MLALGLLDRFTPLVDLPPAWAWLSSDVALWVVGILLVLEVVADKIPAVDAVNDVVQTVVR
+PAAGGITFASGVGAQTVTVQRPDTLLDSQVWVPTLIGAAMALLVHLTKAGTRAAANTVTM
+GTAAPLLSTAEDASAVVLTAAALFLPVLVLVVLLAVLVGLWAVPRRFRAGRRGGRRATMA
+S
+>3_2219
+MLEFLTGTGLATSAGLNAYIPLLALGLLDRFTGLVDLPAGWTWLSADASLWILGALLALE
+LVADKIPGVDAVNDVVQTVVGADTVTVGAAAPVLSAAEDVSAAGLVAAALFLPVLVAVLV
+VAVVVGLWLLARRFRARRTRGRAAAVPGGPEWTA
+>4_253
+MLEFLTGTGLATSAGLNAYIPLLALGLLDRFTGLVDLPAGWTWLAADASLWILGVLLALE
+LVADKIPGVDAVNDVVQTVVGADTVTVGAAAPVLSAAEDVSAAGLVAAALFLPVLVAVLV
+VAVVVGLWLLARRFRDRRTRGRAAAVPGGPEWTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000223.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000223.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8ac8044680f519e4b339919f362c3cc45361df9f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000223.fa
@@ -0,0 +1,35 @@
+>0_96
+MRQNSPVPGSLPARYVDDPAAAFPALRQRALAPGGRPYGLLAAAVVGALTLVDPHRMGAA
+ERRGLARTEAAASGAFVAAEAASSLRLAGLPGRVGPAAGGLAAGAATAALALSTVPLNDR
+IDGALVRFLERAGASAPRAVLAGTAALSVLAGNESVRRERRNALEEAAWPAWDDLSEEEQ
+SEPTAPLPVEVRVLLETLLDPALAEGRELPGAAALRAQLPHVRTVASMAEAIRDEDEVPD
+WTPLVVETDGPVDRAVPHDHVWPVRGRFAVGEDGHEVELRLQVIDGELGALVITLPADED
+ADPDAWDAFQELEAFPGVEDLTFQVDGERRD
+>1_253
+MKLPSPAPSAPGEVHHSASSVPVDGVEAVFPALRQRALAPGGRLYGLAAAAAVGGLTLLD
+PHARRGRERRALAELEAAVSGTVLAAETANALHTAAIADGEVAPSPAARALRGLGGLAVG
+GAVAAVALRTAGLNDRIDGAVVRGLQRVGVPAPRVALAAAASLAMLLANEDARRTRRDAV
+ELAVTGPAGLDEDPVDEVEPEATAELPVEVRVLLETLLDPALAEGRDLPGAEALRSQLPH
+ARTVASVAEAIREAGEVPDWVPLVVQTDDDVRRAVPNDCVWPVRGRFASGSAGGHELELR
+LQVIDGEIGALTVTLPADAEADSDAWDAFQEIESFPGVEDLAFHVDGDRRA
+>2_66
+METPRTPETRTDPPADRLAEPQHPAHADAPVVHDTAVPESERIERTVSTRTGETRPPVVR
+TVVTESERIERPVVEVRDARVPGRLLWWIGGGTLAAGSLAALVRVLRERLATPEPTPLER
+LADAGRGAGLPLALSLAGTAAGVGVSLRARRRRRTEEVLAAPAVPFLLGEAVSAEAGEDD
+VDGLPPVNEASDAYPAGALETEALPLEVVVLLDTLLDPSLDEGRELPGAAALRAQLPHVR
+TAASVAEEIREDGKVPDWTPLVVEEETGVARAIPNDMVWPVRGRFTTEDGHELELRLQVI
+DGELGALVITLPEDVEDGVAAWDAFQELEAFPGVEELTFTVDGDRRP
+>3_2217
+MKLPSPAPSAPGEVHHSASSVPVDGVEAVFPALRQRALAPGGRLYGLAAAAAVGGLTLLD
+PHARRGRERRALAELEAAVSGTVLAAETANALHTAAIADGEVAPSPAARALRGLGGLAVG
+GAVAAVTLRATGLNDRIDGALVRGLQRVGVPAPRVALAAAASLAMLLANEDARRTRRDAV
+ELAVTGPAGLDEDPVDEVEPEATAELPVEVRVLLETLLDPALAEGRDLPGAEALRSQLPH
+ARTVASVAEAIREAGEVPDWVPLVVQTDDDVRRAVPNDCVWPVRGRFASGSAGGHELELR
+LQVIDGEIGALTVTLPADAEADSDAWDAFQEIESFPGVEDLAFHVDGDRRA
+>4_251
+MKLPSPAPSVPGEVHHSASSVPVDDAEAVFPALRQRALAPGGRLYGLAAAAAVGGLTLLD
+PHARRGRERRALAELEAAVSGTFLAAETAGALHTAAIAEGEVAPSPAARALRGLGGLAVG
+GAVAAVALRATGLNDRIDGAVVRGLQRVGVPAPRVALAAAASLAMLLANEDARRTRRDAV
+ELAVTGPAGLDEDAVDEVEPEATAELPVEVCVLLETLLDPALAEGRDLPGAEALRSQLPH
+ARTVTSVAEAIREAGEVPDWVPLVVETDDDIRRAVPNDCVWPVRGRFASGSAGGHELELR
+LQVIDGEIGALTVTLPADAEADSDAWDAFQEIESFPGVEDLTFHVDGDRRV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000225.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000225.fa
new file mode 100644
index 0000000000000000000000000000000000000000..36184db8ce87b3aa0ca5604006951eb49e83f57b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000225.fa
@@ -0,0 +1,30 @@
+>0_103
+MTHVAARARVPKKGLLVFLVVAAVLLLLGALTVVRGIAADAARVNIVSVVDGNTVVVNQG
+GTQRTLVLAGVTSAGRNPEGLKVGPELCMGEQSYAWLRDRLPQGAVASVDTSREGAPEGM
+ESALVHIGGKTVNVDMAEAGMTAPTGIGVDDDMAEEIAAANRVAVGRGVGLYDVEEPCTY
+QNRLYEAQFALDQIPKDAEDSIRRIDERSVEYAAGLDQVRLVQQEIQALDPENGTFEDLA
+YGPARESLLAEADPVVEEGLQVLRDLNARRNEIAARG
+>1_248
+MTHVAARARVPLKGLLVFLAVAAVLLLLGIVTVLRGVAADAARVDIVTVLDGNTVVVNQG
+GTERTVVLAGVTSAGRNPEGLKVGPNLCMGEESYAWLRDRLPQGATASMTTSDEGAPEGM
+ESAVISIGGGTVNVAMAEAGMAAPTDVAVGKRLAEEIAQANQEAVGRGVGLYDIEEPCTY
+QNRLYEAQFALEQIPEDAEASLTKIDERAVEYAAGLDQVRLVQQEVRALDPENGTFADLA
+YGPAKESLLAEADPVVEHGMQVLKDLNTRRNEIAARG
+>2_71
+MTHVAAQARVPKKGLIVFLVVAGVLLALGAASAVRGLVVARDTVEVVRVVDGNHVVVNAD
+GEERTLTLAGVRSAIRNPEGLRVGPEYCMGEEAYAWLRDRLPQGATVRVDRSDEGAPEGE
+QSAVFTVAGKEVNVDMAKAGMAAPTGLGVSGDLEEQIAQANQQAQTAGGRNNGVGLYNRD
+ETCTLGYQLYAAQTELEKVPTAPAANTVVEIDKKSVEYANALDAVRLVQQRIEGLDASSG
+DFTGLAYAPAKDRLLARANPVVDEGMQVLRDLNAQRNALAGG
+>3_2213
+MTHVAARARVPLKGLLVFLAVAAVLLLLGIVTVLRGVAADAARVDIVTVLDGNTVVVNQG
+GTERTVVLAGVTSAGRNPEGLKVGPNLCMGEESYAWLRDRLPQGATASMTTSDEGAPEGM
+ESAVISIGGGTVNVAMAEAGMGAPTEVAVSERLAEEIAQANQEAVGRGVGLYDIEEPCTY
+QNRLYEAQFALEQIPEDAEASLTKIDERAVEYAAGLDQVRLVQQEIRALDPENGTFADLA
+YGPAKESLLAEADPVVEHGMQVLKDLNTRRNEIAARG
+>4_247
+MTHVAARARVPLKGLLVFLAVAAVLLLLGIVTVLRGVAADAARVDIVTVLDGNTVVVNQG
+GTERTVVLAGVTSAGRNPEGLKVGPNLCMGEESYSWLRDRLPQGATASMTTSDEGAPEGM
+ESAVISIGGGTVNVAMAEAGMAAPTEVAVGKRLAEEIAQANQEAVGRGVGLYDIEEPCTY
+QNRLYEAQFALEQIPEDAEASLTKIDERAVEYAAGLDQVRLVQQEIRALDPENGTFADLA
+YGPAKESLLAEADPVVEHGMQVLKDLNTRRNEIAARG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000227.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000227.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4a65704a75ca143a84578d2688c08a1add467dfe
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000227.fa
@@ -0,0 +1,90 @@
+>0_105
+MTSPQTTESTTALPHERVEPKDTASAPFVARHIGPRPADVEHMLQTLGYDSLEALVDTAV
+PAGIRQPKPLELPAPLTESAVLEQLREIAGRNVMKTQMIGQGFSDTVTPGVILRKVLENP
+AWYTAYTPYQPEISQGRLEALLNYQTMVQDLTGLDIANASLLDEASAAAEAVLLMHRANR
+RRTDGVTLLDADLFPQTLSVVRLRAEAVGIDVRVADLSAGIPEDVRAEVEEKGLCGVVLQ
+QPGDSGRIHDHAAVIAQAKEAGALVTVAADILSLALITPPGEQGADIAVGSTQRFGVPLF
+FGGPHAAYMAVKEGLQRSMPGRLVGVSHDDAGKPAYRLALQTREQHIRREKATSNICTAQ
+ALLAIVASMYAVYHGPQGIARIARHAHAQAVRLAEALRAGGVEVAEEHFFDTLTVRVPGR
+AEQVLQAAEENGVNLRLVDADTLRIAADETTVDADLVAVLTAFGLDAGALPASAHEGAVA
+TPAVPEALRRSSAFMTHPVFNTHHSETQMLRYLRRLSGYDLALDRTMIPLGSCTMKLNAT
+AEMEAISWPEFCSIHPFAPDHQTEGWRFLIADLEAKLAEITGYAGVSVAPNAGSQGEFAG
+LWAIRQYHLARGEGERDICLIPASAHGTNAASAVLAGLKVVVVATADDGTIDAADLDAKI
+AANEGRIAAIMITYPSTHGVYDADVKEVCATVHAAGGQVYIDGANLNALVGLAQPGGFGG
+DVSHLNLHKTFCIPHGGGGPGVGPVAVGEHLVPYLPSREALMTAAPHGSAGVLPISWAYI
+HLMGAEGLRSATEHALLGANYISRRLAPLYPTLYTGNDGLVAHECILDLRELTARTGVTA
+EDVCKRLIDYGFHAPTLAFPVAGTLMVEPTESEDLQEIERFIEAMEAIHAEITAVTPETV
+ADSVLRRAPHTLNVLMADEWDRPYSRAQAGTPVPSLRLDKYLPPVGRIDGAYGDRNLVCS
+CPPPEAFEDAVADTADED
+>1_246
+MTSPQTTESTTALPHERVEPKDTASAPFVARHIGPRPADVEHMLQTLGYDSLEALVDTAV
+PAGIRQPKPLELPAPLTESAVLEQLREIAGRNVMKTQMIGQGFSDTVTPGVILRKVLENP
+AWYTAYTPYQPEISQGRLEALLNYQTMVQDLTGLDIANASLLDEASAAAEAVLLMHRANR
+RRTDGVTLLDADLFPQTLSVVRLRAEAVGIDVRVADLSAGIPEDVRAEVEEKGLCGVVLQ
+QPGDSGRIHDHAAVIAQAKEAGALVTVAADILSLALITPPGEQGADIAVGSTQRFGVPLF
+FGGPHAAYMAVKEGLQRSMPGRLVGVSHDDAGKPAYRLALQTREQHIRREKATSNICTAQ
+ALLAIVASMYAVYHGPQGIARIARHAHAQAVRLAEALRAGGVEVAEEHFFDTITVRVPGR
+AEQVLQAAEENGVNLRLVDADTLRIAADETTVDADLVAVLTAFGLDAGSLPASAHEGAVA
+TPAVPESLRRSSAFMMHPVFNTHHSETKMLRYLRRLSGYDLALDRTMIPLGSCTMKLNAT
+AEMEAISWPEFCSIHPFAPDHQTEGWRFLIADLEAKLAEITGYAGVSVAPNAGSQGEFAG
+LWAIRQYHLARGEGERDICLIPASAHGTNAASAVLAGLKVVVVATADDGTIDAADLDAKI
+AANEGRIAAIMITYPSTHGVYDADVKEVCATVHAAGGQVYIDGANLNALVGLAQPGEFGG
+DVSHLNLHKTFCIPHGGGGPGVGPVAVGEHLVPYLPSREALMTAAPHGSAGVLPISWAYI
+HLMGAEGLRSATAHALLGANYISRRLAPLYPTLYTGNDGLVAHECILDLRELTARTGVTA
+EDVCKRLIDYGFHAPTLAFPVAGTLMVEPTESEDLEEIERFIEAMEAIHAEITAVTPETV
+ADSVLRRAPHTLNVLMADEWDRPYSRAQAGTPVPSLRLDKYLPPVGRIDGAYGDRNLVCS
+CPPPEAFEGAVADTADED
+>2_73
+MTSPLTPTEPRDTASAPFVARHIGPRGEDVRHMLQTLGLGSVDELVDTAVPSVIRQSAPL
+DLPAPLTEAAALEQLREIAGRNVVKTQMIGQGFYDTVTPGVILRKVLENPAWYTAYTPYQ
+PEISQGRLEALLNYQQMVEDLTALPIANASLLDEASAAAEAVLLMHRANRKKADGITLLD
+ADLFPQTLTVAQMRAEAVGLEVRVADLSAGIPEDVRAEVEEKGLCGVVLQQPGDSGRLHD
+HSAVIAQAKEAGALITVAADILSLALITPPGEQGADIAIGSTQRFGVPLFFGGPHAAYLA
+VREGLQRSMPGRLVGVSHDDAGKPAYRLALQTREQHIRREKATSNICTAQALLAITASMY
+AVYHGPAGITAIARHAHAQAHRLAIALAGAGVEVAHAEYFDTLTLNVPGRAEEVVRAAEE
+AGVNLRLVDADIVRVACDETTVDEDLAAVLTAFGADPASLPAAPHEGAVQTPAVPEAQRR
+TSAFMTHPVFNTHRSETQMLRYITRLANRDLALDRTMIPLGSCTMKLNATTEMEAISWPE
+FCAIHPFAPDHQTEGWRFLISDLEERLAEITGYAGVSVAPNAGSQGEFAGLWAIRQYHLA
+HGDGERDVCLIPASAHGTNAASAVLAGLRVVVVATADDGTIDSADLDAKIAAHEGRVAAI
+MITYPSTHGVFDGDVTEVCDKVHAAGGQVYIDGANLNALVGLARPGAFGGDVSHLNLHKT
+FCIPHGGGGPGVGPVAVGEHLVPFLPSAERLVTAAPHGSAGVLPISWAYIAMMGGEGLKD
+ATEQALLNANYISRRLADHYPTLYTGEGGLVAHECILDLRELTAQTGVTAEDVCKRLIDY
+GFHAPTLAFPVAGTLMVEPTESEDLAELDRFIDAMISIHAEITATTPETVEQSVLRRAPH
+TLGATTGEDWDRPYTRAQALYPLPSLVDDKYLPPVGRIDGAYGDRNLVCSCPPPEAFEEA
+AASPESTEPVSAADTASTSH
+>3_2211
+MTSPQTTESTTALPHERVEPKDTASAPFVARHIGPRPADVEHMLQTLGYDSLEALVDTAV
+PAGIRQPKPLELPAPLTESAVLEQLREIAGRNVMKTQMIGQGFSDTVTPGVILRKVLENP
+AWYTAYTPYQPEISQGRLEALLNYQTMVQDLTGLDIANASLLDEASAAAEAVLLMHRANR
+RRTDGVTLLDADLFPQTLSVVRLRAEAVGIDVRVADLSAGIPEDVRAEVEEKGLCGVVLQ
+QPGDSGRIHDHAAVIAQAKEAGALVTVAADILSLALITPPGEQGADIAVGSTQRFGVPLF
+FGGPHAAYMAVKEGLQRSMPGRLVGVSHDDAGKPAYRLALQTREQHIRREKATSNICTAQ
+ALLAIVASMYAVYHGPQGIARIARHAHAQAVRLAEALRAGGVEVAEEHFFDTITVRVPGR
+AEQVLQAAEENGVNLRLVDADTLRIAADETTVDADLVAVLTAFGLDAGSLPASAHEGAVA
+TPAVPESLRRSSAFMTHPVFNTHHSETKMLRYLRRLSGYDLALDRTMIPLGSCTMKLNAT
+AEMEAISWPEFCSIHPFAPDHQTEGWRFLIADLEAKLAEITGYAGVSVAPNAGSQGEFAG
+LWAIRQYHLARGEGERDICLIPASAHGTNAASAVLAGLKVVVVATADDGTIDAADLDAKI
+AANEGRIAAIMITYPSTHGVYDADVKEVCATVHAAGGQVYIDGANLNALVGLAQPGEFGG
+DVSHLNLHKTFCIPHGGGGPGVGPVAVGEHLVPYLPSREALMTAAPHGSAGVLPISWAYI
+HLMGAEGLRSATAHALLGANYISRRLAPLYPTLYTGNDGLVAHECILDLRELTARTGVTA
+EDVCKRLIDYGFHAPTLAFPVAGTLMVEPTESEDLEEIERFIEAMEAIHAEITAVTPETV
+ADSVLRRAPHTLNVLMADEWDRPYSRAQAGTPVPSLRLDKYLPPVGRIDGAYGDRNLVCS
+CPPPEAFEDAVADTADED
+>4_245
+MTSPQTTESTTALPHERVEPKDTASAPFVARHIGPRPADVEHMLQTLGYDSLEALVDTAV
+PAGIRQPKPLELPAPLTESAVLEQLREIAGRNVMKTQMIGQGFSDTVTPGVILRKVLENP
+AWYTAYTPYQPEISQGRLEALLNYQTMVQDLTGLDIANASLLDEASAAAEAVLLMHRANR
+RRTDGVTLLDADLFPQTLSVVRLRAEAVGIDVRVADLSAGIPQDVRAEVEEKGLCGVVLQ
+QPGDSGRIHDHAAVIAQAKEAGALVTVAADILSLALITPPGEQGADIAVGSTQRFGVPLF
+FGGPHAAYMAVKEGLQRSMPGRLVGVSHDDAGKPAYRLALQTREQHIRREKATSNICTAQ
+ALLAIVASMYAVYHGPQGIARIARHAHAQAVRLAEALRAGGVEVAEEHFFDTITVRVPGR
+AEQVLKAAEENGVNLRLVDADTLRIAADETTVDADLVAVLTAFGLDAGSLPASAHEGAVA
+TPAVPEALRRSSAFMTHPVFNTHHSETKMLRYLRRLSGYDLALDRTMIPLGSCTMKLNAT
+AEMEAISWPEFCSIHPFAPDHQTEGWRFLIEDLEAKLAEITGYAGVSVAPNAGSQGEFAG
+LWAIRQYHLARGEGERDICLIPASAHGTNAASAVLAGLKVVVVATADDGTIDAADLDAKI
+AANEGRIAAIMITYPSTHGVYDADVKEVCATVHAAGGQVYIDGANLNALVGLAQPGEFGG
+DVSHLNLHKTFCIPHGGGGPGVGPVAVGEHLVPYLPSREALMTAAPHGSAGVLPISWAYI
+HLMGAEGLRSATAHALLGANYISRRLAPLYPTLYTGNDGLVAHECILDLRELTARTGVTA
+EDVCKRLIDYGFHAPTLAFPVAGTLMVEPTESEDLEEIERFIEAMEAIHAEITAVTPETV
+ADSVLRRAPHTLNVLMADEWDRPYSRAQAGTPVPSLRLDKYLPPVGRIDGAYGDRNLVCS
+CPPPEAFEGAVADTADED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000229.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000229.fa
new file mode 100644
index 0000000000000000000000000000000000000000..158f66d8455024745dd7b0d21a3b7993f18f0120
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000229.fa
@@ -0,0 +1,24 @@
+>0_112
+MKNAPLPQDPIREAARNWERHGWGDVARPMAAVTSIMRAQQILLGRTQAALKPFGLTFAR
+YELLALLNFSREKRMRMSKASALLQVHPTSVTNAVDRLESAGLVERTPHESDRRALVLAL
+TDEGRRVAVAATETLNEEVFGRTGFDEADVDALIDVFGRFRAGAGDFEADGADTTTERPS
+A
+>1_240
+MKKPPLAQDPIREAARNWERHGWGDVARPMAAITSIMRAQQILLGRAQAALKPYGLTFAR
+YELLALLNFSRENRMRMSKASALLQVHPTSVTNAVDRLEAAGLVERTPHESDRRALVLAL
+TDEGRRVAVAATETLNAEVFGRSGFGPADVDTLIDVLGRFRAEAGDFQVDGPDAGAPATA
+EHTSS
+>2_80
+MSTRDPLPQDPIREAARNWEHHGWGEVAAPMAAVTAIMRTQAILLARTQAVLKPFGLTFA
+RYELLALLNFSRERRQLMSKAGALLQVHPTSVTNAVDRLEAAGLVERQPHETDRRALLLA
+LTDEGRRVADAATEALNAEVFGATGFTDDDVAALNEILGRFRAGSGDFEA
+>3_2203
+MKKPPLAQDPIREAARNWERHGWGDVARPMAAITSIMRAQQILLGRAQAALKPYGLTFAR
+YELLALLNFSREKRMRMSKASALLQVHPTSVTNAVDRLEAAGLVERTPHESDRRALVLAL
+TDEGRRVAVAATETLNAEVFGRSGFDPADVDTLIDVLGRFRAEAGDFEADGPDAGAPATA
+EHTSS
+>4_240
+MKKPPLAQDPIREAARNWERHGWGDVARPMAAITSIMRAQQILLGRAQAALKPYGLTFAR
+YELLALLNFSREKRMRMSKASALLQVHPTSVTNAVDRLEAAGLVERTPHESDRRALVLAL
+TDEGRRVAVAATETLNAEVFGRSGFDPADVDTLIDVLGRFRAEAGDFEADGPDAGAPATA
+EHTSS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000231.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000231.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0f895f8102aa8b9371dfca27c17c8c0e6c2015d6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000231.fa
@@ -0,0 +1,43 @@
+>0_114
+MSEKTATTTTAPVIPHFVHGERVDGSSGRHSDVYHPATGQVEGRVPLASVEEIDAALASS
+EKGFAAWSALNPQRRGRILLKWVDLINENVDELATLLSQEHGKTVPDAKGDIQRGVEVVE
+FAAGAPHLLKGEFSSNAGSGIDVHSIRQPLGIAVGITPFNFPAMIPLWKAGIALAAGNAF
+VLKPSERDPSVPVRLAELALEAGMPAGALNVVHGDKTAVDALIEDPRVKAVGFVGSTPIA
+QSIYAHAGRMGKRAQCFGGAKNHAVIMPDADLEMAADALVGAAFGSAGERCMAISVAVPV
+GEETADRLVALLSERIRRLKVGPSLDESSDFGPVVSKDAKERIEGYIAAGAAAARRPGRG
+RPRRRRRGPRGRLLRGRHPLRPRHRGHEHLPRGDLRPGALRGPRRGLRGGAHPRQRARVR
+QRRGHLHPRRRRRPRLRHPRGDRHGGRQRADPRPDRLLHLRRLEGLRLRRPEPARHRRPE
+VLHQDQDHHHALALGRARGRQLRDARRLLTAVHPLPQEDPMTTVLFLGLGHMGGPMAANL
+AAAGHRVLGFDLVPEALEKARMAGIETVTDTAAAAAEADVVLTMLPNGRLVLDVYRGREG
+APGLLDAARPGTVFLDCSTIDVAEAREAAQAAEAAGMRAADAPVSGGQVGAEAGTLAFMV
+GAADEVYAEVLPLLEVMGGRIVHCGGSGLGQAAKICNNMVLGVTQIAVAEAFVLGERLGL
+EHQALYDVMSKASGQCWALTTNCPVPGPVPGSPANRDFQPGFAGALMAKDLGLALAALDE
+QGVAADLGRLAQAKYAEYAAGEGAARDFSGIIEDIRASHTDRSEA
+>1_237
+MTTVLFLGLGHMGGPMAANLAAAGHRVLGFDLVPEALEKARAAGVETVTDTAAAAAEADV
+VLTMLPHGRLVLDVYRGEDGDGGLLAAARPGTVFLDCSTIDVAEAREAAAAAEAAGMRAA
+DAPVSGGQVGAEAGTLAFMVGASDEVYAEVLPLLEVMGARIVHCGAAGLGQAAKICNNMV
+LGVTQIAVAEAFVLGERLGLQHQALYDVMSKASGQCWSLTTNCPVPGPVPGSPVNRDFQP
+GFAGALMAKDLGLALAALDEQGVAADLGRLAQAKYAEYAAGEGAARDFSGIIEDIRASHT
+DRSEA
+>2_83
+MSQSQTPSASLPGTVAFIGLGNMGGPMAANLVAAGVTVRGFDLVPAAVEAARATGVEIAD
+DAASAVPGADVVITMLPNGALVRGVYEGTADAPGLLGAADPDTLFLDCSTISTSEAQEVA
+ALAEAAGHRAADAPVSGGVVGAQAGTLAFMVGGSVEVFEEIRPLLEVMGSRIVHCGGNGL
+GQAAKVCNNMLLAISQIGVAEAFVLGERLGLEHQVLFDVMSEATGRCWSLTANCPVPGPV
+PTSPANRDFEGGFAGALMAKDLGLALKALDEQHVGAEMGRLAQRTYAAYADGEGARKDFS
+GIIETVREAGKDTAA
+>3_2200
+MTTVLFLGLGHMGGPMAANLAAAGHRVLGFDLVPEALEKARAAGVETVTDTAAAAAEADV
+VLTMLPHGRLVLDVYRGEDGDGGLLAAARPGTVFLDCSTIDVAEAREAAAAAEAAGMRAA
+DAPVSGGQVGAEAGTLAFMVGASDEVYAEVLPLLEVMGARIVHCGAAGLGQAAKICNNMV
+LGVTQIAVAEAFVLGERLGLQHQALYDVMSKASGQCWSLTTNCPVPGPVPGSPANRDFQP
+GFAGALMAKDLGLALAALDEQGVAADLGRLAQAKYAEYAAGEGAARDFSGIIEDIRASHT
+DRSEA
+>4_237
+MTTVLFLGLGHMGGPMAANLAAAGHRVLGFDLVPEALEKARAAGVETVTDTAAAAAEADV
+VLTMLPHGRLVLDVYRGEDGDGGLLAAARPGTVFLDCSTIDVAEAREAAAAAEAAGMRAA
+DAPVSGGQVGAEAGTLAFMVGASDEVYTEVLPLLEVMGARIVHCGGAGLGQAAKICNNMV
+LGVTQIAVAEAFVLGERLGLQHQALYDVMSKASGQCWSLTTNCPVPGPVPGSPANRDFQP
+GFAGALMAKDLGLALAALDEQGVAADLGRLAQAKYAEYAAGEGAARDFSGIIEDIRASHT
+DRSEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000238.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000238.fa
new file mode 100644
index 0000000000000000000000000000000000000000..31012847c2512746bc8e7d26203632808e77f65d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000238.fa
@@ -0,0 +1,40 @@
+>0_127
+MAIHPVDATLQAAKIDPEERTERLQGVKLDGAGWKYALGRAFKEFGKDGGTDLAAKLTYF
+MVLSLAPSLLAVFSILSLVLASNRGAIDDLMAQMTGLVPGEYQPLVTDLVTTMSESASGG
+GGIVALVVGILTALWSASAYVKAFNRSVNTVYGYEEGRGFVKLTLSNLLTTLIMIVGIVV
+VLISLALNRSLVDGFLAPIAGPLGMTGAVNFLSDTFLPIWAWVKWPVVVVILLLLIATLY
+YTTPNVRKPSFNLFGPGNVFALVGMVLAAVGLSVYFTQFAGYSAYGAIGTIMALLFALWI
+FNIVLLLGVEIDAEVERAKQLVAGLPAEEAVRLPPKDASALEKRVEKQTALQERGYELRA
+THEDR
+>1_226
+MAIHPVDATLEAAKIDPDQRAERLKGVKLDGAGWKYALTRALKEFGNDGGTDLAAKLTYY
+LVLSLAPSLLAVFSILSLVLASNRGAIDDLLGELTGLVPSDYQPLVTNLVTTMSDSAGSG
+GGIIALIIGIATALWSASAYVKAFNRSANTVYGYEEGRGLVKLTLTNLLTTLILIVGIVV
+VLLSLALNRSLVDGFLQPIAGPLGMTGVVNFLSDTFLPVWAWAKWPVVVVILLVLIATLY
+YTTPNVQKPRFHLFGPGNIVALVGMVLAAVALSVYFTQFAGYSAYGAIGTVMALLFALWI
+FNIVLLLGLEVDAEVERARQLEAGLPAEARVQLPPKDVAGVEKRAEKQTAVEERGYELRA
+VHEGR
+>2_92
+MAIHPVDATLEAARIDPEERTRRLKGVKLDGAGWKYAFTRALKEFGNDGGTDLAAKLTYF
+MVLSLAPALLAVFSILTLVLSSNRSAVDDVVRQLTELVPADYQGVVGDVVDNLLGQAGGG
+VLALIIGILTALWSASAYVKAFSRASNQVYNYSEGRGFVKLTLTNLVTTVVMLVGIVLVL
+ISLALNRSLVDGFLAPIAGPLGMTDAVNFLSDTFLPIWAWLKWPVVVALLLVLIATLYYF
+APNVKKPSFHMFGPGNIFALVGMALAAVALYFYFTTLAGYSAYGAIGGVMALLFALWIFN
+IVLLLGLEIDTEVERAKQLTAGMPAEDAVKLPPKDVSALEKKVEKQEELEEKGYELRALH
+DDGSDSDSDEGKGVSRAPRHAAGSHGA
+>3_2190
+MAIHPVDATLEAAKIDPDQRAERLKGVKLDGAGWKYALTRALKEFGNDGGTDLAAKLTYY
+LVLSLAPSLLAVFSILSLVLASNRGAIDDLLGQLTGLVPSDYQALVTNLVTTMSDSAASG
+GGIIALVIGIATALWSASAYVKAFNRSANTVYGYEEGRGLVKLTLTNLLTTLILIVGIVV
+VLISLALNRSLVDGFLQPIAGPLGMTGVVNFLSDTFLPVWAWVKWPVVVLILLLLIATLY
+YTTPNVQKPRFHLFGPGNIVALVGMVLAAVALSVYFTQFAGYSAYGAIGTIMALLFALWI
+FNIVLLLGLEVDAEVERARQLEAGLPAEARVQLPPKDVAGVEKRAEKQTAVEERGYELRA
+VHEGR
+>4_227
+MAIHPVDATLEAAKIDPDQRAERLKGVKLDGAGWKYALTRALKEFGNDGGTDLAAKLTYY
+LVLSLAPSLLAVFSILSLVLASNRGAIDDLLGQLTGLVPSDYQALVTNLVTTMSDSAASG
+GGIIALVIGIATALWSASAYVKAFNRSANTVYGYEEGRGLVKLTLTNLLTTLILIVGIVV
+VLISLALNRSLVDGFLQPIAGPLGMTGVVNFLSDTFLPVWAWVKWPVVVLILLVLIATLY
+YTTPNVQKPRFHLFGPGNIVALVGMVLAAVALSVYFTQFAGYSAYGAIGTIMALLFALWI
+FNIVLLLGLEVDAEVERARQLEAGLPAEARVQLPPKDVAGVEKRVEKQTTLEERGYELRA
+VHEGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000240.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000240.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f72db3ac1738341b69cdccc02ef649dbe42f4888
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000240.fa
@@ -0,0 +1,35 @@
+>0_129
+MSTATDLGPHRSTFGPDAAGRVPSSGTGLASTGGRVAMLLVVLAALVAAFLGAGVVAGFT
+PVAEASGGWLGPDATWVAPASPAFSIWSVIYAGLLAYAVWQFLPSAQSARHDRLRPWILV
+SVLLNAAWIWTVQLGLLGLSVVVIVLLLASLCRILMLLESARAHSWGERILLDGVQGLHL
+GWVSIATVANVAAWLASTGWTGDPFQPTTWAKIMIVVAVLVGAFTAVYDGGRPAPAFALA
+WGLVWIGVGRADGSGLLSGSLAVLAWGGAAIVLLCWVAALLLSRRSATGEARDLVLDALD
+GGDDPVDGRR
+>1_224
+MSTATDLGPSRSPFGPDAAARVPSSGTGLSSTGGRVAMLVVVILAVVAAFLGSGVVGGLT
+PVAEAAGGWLGPDATWVSPATPAFGIWSVIYAGLLAYAVWQFLASAQSARHDRLRPWILV
+SVLLNAAWIWTVQAGLLGLSVVVIALLLACLAWILVLLESVRAHSWGERILLDGVQGLHL
+GWVSIAAVANLAAWLASTGVVGDPGQSSLWAKVMLVVAVLIGAFTAVYNGGRPAPAFALA
+WGLMWIGVGRADGTGLLSGSLALLAWGGAAIVLLCWLAALLLSRRSATGEARDLVLDALD
+GGGDPIDGRR
+>2_94
+MSTAIDAGPQGTVPIDAAQAPSSGRGLASPGGRWAMLAVVVLGLVGAFLGAGVLPGMTPT
+SDAAGGWLGADSTWIAPATPAFRIWSVIYLGLLAYGVWQLAGSAQSARHDALRTWIMASI
+VLNVAWLWVVQVGWLGLSVVVIFLLLAVLCRILVLLETGRPRGWAARILLDGVQGLHLGW
+VSIAAVTNVAAWLASLGWFGAPLEPTRWAQIMIVVAVLVGAFTAVYSGGRFAPAAALAWG
+LLWVGVGRSDGSGLLSGAVALTAWGAAAIVMLCWLVSLWLSSRSATGEARDLVLDALDGG
+GDPVDGVR
+>3_2188
+MSTATDLGPSRSPFGPDAAARVPSSGTGLSSTGGRVAMLVVVILAVVAAFLGSGVVGGLT
+PVAEAAGGWLGPDATWVSPATPAFGIWSVIYAGLLAYAVWQFLASAQSARHDRLRPWILV
+SVLLNAAWIWTVQAGLLGLSVVVIALLLACLAWILVLLESVRAHSWGERILLDGVQGLHL
+GWVSIAAVANLAAWLASTGVVGDPGQSSLWAKVMLVVAVLIGAFTAVYNGGRPAPAFALA
+WGLVWIGVGRADGTGLLSGSLALLAWGGAAIVLLCWLAALLLSRRSATGEARDLVLDALD
+GGGDPIDGRR
+>4_225
+MSTATDLGPSRSPFGPDAAARVPSSGTGLSSTGGRVAMLVVVILAIVAAFLGSGVVGGLT
+PVAEAAGGWLGPDATWVSPATPAFGIWSVIYAGLFAYAVWQFLPSGQSARHDRLRPWILV
+SVLLNAAWIWTVQAGLLGLSVVVIALLLACLAWILVLLESVRAHSWGERILLDGVQGLHL
+GWVSIAAVANLAAWLASTGVVGDPGQSSLWAKVMLVVAVLIGAFTAVYNGGRPAPAFALA
+WGLVWIGVGRADGTGLLSGSLALLAWGGAAIVLLCWLAALLLSRRSATGEARDLVLDALD
+GGGDPIDGRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000252.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000252.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3fc8bcebed261068894dfa8e38cbf5152f5295ea
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000252.fa
@@ -0,0 +1,10 @@
+>0_156
+MDRSNEIPPELQGLDWGEDDAPRRRRPLITLVAWLCIIGLVLGVAAGLFSIL
+>1_207
+MDRELRTPPELEGVDWHDDAPRRPRPIVTLVAWIAILGLVLSVGAGIFSAF
+>2_109
+MADLPPELEFAEFDDDPRPSAPSPWVRVLAVVVLLGLVGSLAAGLFGGI
+>3_2151
+MDRELRTPPELEGVDWHDDAPRRPRPIVTLVAWIAILGLVLSVGAGIFSAF
+>4_207
+MDRELRTPPELEGVDWHDGAPRRPRPIVTLVAWIAILGLVLSVGAGIFSAF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000259.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000259.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5ea6637020d0a2f8280f254fc29ac6d3ca121330
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000259.fa
@@ -0,0 +1,30 @@
+>0_172
+MPRQNPTGRARRGLPLAALGAAAALVLTGCGASGEDASAAWDRARTQLEETDSVRMVTEL
+RSDAPQAGNRTPESVDLSGPVDGSSMRYVSTYEDGDLITRDESRVVDGTAYSRFTVERRG
+ASGEDRPAYVERWTAAPHTGDPRATGMGAMVSSLLGSLPESGGLEDVAVDADGIRRSGQD
+AVRYVLDEPLSVADDGVAMTAFTVSEEDGRLLTVETESAGTKAVVTVSEMGDVEPLQAPP
+SDEVLPQQQGQGAPGAVPPGGAPQDGTAPGGTPAEPVPPTDG
+>1_201
+MRQRQTQTRRTRRGLSLAALGAAALLLTGCASGDDAPGAWDRARTQLEEADSVRMVTELR
+SEAPSNGRAVPDAVDISGPVDGSSMRYVSVYKDDGLITRDESRIVDGTAYSRFTVERVGA
+SGEDHPAYAERWTATPYEGDPSATGMGAMVSSLLGSLPESGGLDDVEADADGIRRSGQDA
+IRYVLDEPVSGPQEGVELTAFTVSKEDGRLLTVETESAGTKAVVTLSEMGGVDPVQAPPA
+DEVLKQDG
+>2_118
+MRPTTPRTPAPHGGARRRALSLAALGAAAALSLSACGASGEDASAAWDAARTQLQDASSV
+RLTTEARNDSGAAPGTPDGVEIAGDVHSSDLSYTGVFRTDGYITRDESRTVGGQRYERFT
+LEQPGGVSGEGRPAFAEKWKKAEPLPGDASMRSILDGVLTAVPQAGALQGADVRATDIRR
+QGRDATRYVLDTPVKGGTTDSSLTAFTVADDDGTLLTVETTGPGTRGTVTFSDWNAVEPV
+TAPATEDMAQDTATAK
+>3_2145
+MRQRQTQTRRTRRGLSLAAVGAAALLLTGCASGDDAPGAWDRARTQLEEADSVRMVTELR
+SEAPSNGRAVPDSVDISGPVDGSSMRYVSVYQDDGLITRDESRIVDGTAYSRFTVERAGA
+SGEDRPAYVERWTATPYESDPRATGMGAMVSSLLGSLPESGGLDDVEADADGIRRSGQDA
+IRYVLDEPVSGPQEGVELTAFTVSKEDGRLLTVETESAGTKAVVTLSEMGGVDPVQAPPA
+DEVLKQDG
+>4_201
+MRQRQTQTRRTRRGLSLAAVGAAALLLTGCASGDDAPGAWDRARTQLEEADSVRMVTELR
+SEAPSNGRAVPDSVDISGPVDGSSMRYVSVYQDDGLITRDESRIVDGTAYSRFTVERAGA
+SGEDRPAYVERWTATPYESDPRATGMGAMVSSLLGSLPESGGLDDVEADADGIRRSGQDA
+IRYVLDEPVSGPQEGVALTAFTVSKEDGRLLTVETESAGTKAVVTLSEMGEVDPVQAPPA
+DEVLKQDG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000262.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000262.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6fa98ff1e7e5ccbd55a5ce73ff5d211edb24b24d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000262.fa
@@ -0,0 +1,70 @@
+>0_180
+MTPSPLDAATRARSSAPASPGDAPTAPDAPVRRPNDGVPAEALATLPGPLPQAVVDAADP
+DVHPGRAEDLAHGGRGDGRPVAEEDRLAFWAAAGRRLTWDREFTRVSTGTPADPAAERGP
+ALRWYEDGRLNVAVNCVDRHVAAGRGEKVALYFEGEPGDREAVTYADLQRRVAQAAHALE
+DLGIGPGDRVVVYLPVLVETIVIALACARIGAVHSLVFGGFSADALRFRVEDTGAKLLVT
+TDGQHRRGQVVPVKENADAAVAGDNAIEHVLVIARCGLTGAGEIPWTEGRDLWWHDVVET
+KPTEHAPASFDAEHPLFVMYTSGTTGRPKGLVHTSAGYLAAASWTHDFLFSHPDPARRHE
+DVHWCTADLAWVTAHTYEIYGPLSNGVTQVIYEGVPNAPHPGRHFEVIDRYRVTSYYTAP
+TLIRSLMGWHPDGIPAEHSLESIRLIGTVGEAVNPEAWTWARTQIGRAALARTGEPVPMV
+DTWWQSETGSTVLSPRPTDHTFKPGCGSRPLPGVEVAVVDDDGAPVPAQTQGKIVVTRTS
+PSMARTVWGDPARYFHSYWEDCAEQGWFLAGDGAKTDEDGDVWILGRIDDVINISGHRLS
+TIEIESALVAHPHVVEAGVCPVPDARTGHAAVAFVVPGREWAPGPEGDEAAAALAAERAE
+ELRRHVGTVIGPVAKPAEVVFVPDVPKTRSGKIMRRLLTQLHTGTALGDTTNLQNEVCVG
+QIAQVLADRPGR
+>1_194
+MTAGDDGGRGAVVGVPTLVGPADQEEPPPMTPTEDPARPDPAEEGASGAVRGPNDGVPAA
+ALATLPGPLPQALVDAADPDVHPGRPADRLHGGRGDGRPVAEADRLAFWEAAGRRLSWER
+PFTRTRSLTAPDPAAERGPEIRWYEDGTLNVAVNCVDRHVAAGRGEKVALYFEGEPGDRR
+AVTYAQLQREVAQAANALEELGIEAGDRVVVYLPVLVETIVITLACARIGAVHSLVFGGF
+SAEALRFRVEDTGAKLLVTTDGQFRRGAAVPVKANADEAVSGDNAIEHILVLDRTGHRDI
+PWTEGRDLWWHDVVDRQPDTHTPRAFDAEHPLFIMYTSGTTGQPKGLVHTSGGYLAAASW
+THDFLFSHPNPARRDDDVHWCTADLAWVTAHTYEIYGPLSNGVTQVIYEGVPNAPHPGRH
+FEVIERYRVTSYYTAPTLIRSLKGWHPDGIPAHADGGPDLSSIRLIGTVGESVNPEAWTW
+ARTQIGRDTPDLPMVDTWWQSETGATVLSPRPTDTAFKPGCGSRPLPGVDVAVVDDDGAP
+TPEGLQGRIVVTRTSPAMARTVWRNPARYFHSYWEDYADQGEAGWFLAGDGAKRDEDGDV
+WILGRVDDVINISGHRLSTIEIESALVAHPEVIEAGVCPVPHETTGHAAVAFVVAHESWL
+AGDDGPGASAADRAEELRRHVGRVIGPVAKPAEVVFVPDVPKTRSGKIMRRLLTQLHQGT
+ALGDTTSLQNEPCVGQIAEVLRAGRRAQDAGTGAVRSASSAST
+>2_134
+MTAGDDGGRGAVIVVPTLVGPADQEEPPPMTPTEDPARPDPAEEGASGAVRGPNDGVPAA
+ALATLPGPLPQALVDAADPDVHPGRPADRLHGGRGDGRPVAEADRLAFWEAAGRRLSWER
+PFTRTRSLTAPDPAAERGPEIRWYEDGTLNVAVNCVDRHVAAGRGEKVALYFEGEPGDRR
+AVTYAQLQREVAQAANALEELGIEAGDRVVVYLPVLVETIVITLACARIGAVHSLVFGGF
+SAEALRFRVEDTGAKLLVTTDGQFRRGAAVPVKANADEAVSGDNAIEHVLVLDRTGHRDI
+PWTEGRDLWWHDVVDRQPDTHTPRAFDAEHPLFIMYTSGTTGQPKGLVHTSGGYLAAASW
+THDFLFSHPDPARRDGDVHWCTADLAWVTAHTYEIYGPLSNGVTQVIYEGVPNAPHPGRH
+FEVIERYRVTSYYTAPTLIRSLKGWHPDGIPAHADGGPDLSSIRLIGTVGESVNPEAWTW
+ARTQIGRDTPDLPMVDTWWQSETGATVLSPRPTDTAFKPGCGSRPLPGVDVAVVDDDGAP
+TPEGLQGRIVVTRTSPSMARTVWRNPARYFHSYWEDYADQGEAGWFLAGDGAKRDEDGDV
+WILGRVDDVINISGHRLSTIEIESALVAHPHVVEAGVCPVPDPKTGHAAVAFVVAHESWL
+AGDDGPGASAADRAEELRRHVGRVIGPVAKPAEVVFVPDVPKTRSGKIMRRLLTQLHQGT
+TIGDTTSLQNEWCIPQIAEVVAARR
+>3_2140
+MTPTEDPARPDPAEEGASGAVRGPNDGVPAAALATLPGPLPQALVDAADPDVHPGRPADR
+LHGGRGDGRPVAEADRLAFWEAAGRRLSWERPFTRTRSLTAPDPAAERGPEIRWYEDGTL
+NVAVNCVDRHVAAGRGEKVALYFEGEPGDRRAVTYAQLQREVAQAANALEELGIEAGDRV
+VVYLPVLVETIVITLACARIGAVHSLVFGGFSAEALRFRVEDTGAKLLVTTDGQFRRGTA
+VPVKANADEAVSGDNAIEHVLVLDRTGHRDIPWTEGRDLWWHDVVDRQPDTHTPRAFDAE
+HPLFIMYTSGTTGQPKGLVHTSGGYLAAASWTHDFLFSHPDPARRDDDVHWCTADLAWVT
+AHTYEIYGPLSNGVTQVIYEGVPNAPHPGRHFEVIERYRVTSYYTAPTLIRSLKGWHPDG
+IPAHADGGPDLSSIRLIGTVGESVNPEAWTWARTQIGRDTPDLPMVDTWWQSETGATVLS
+PRPTDTAFKPGCGSRPLPGVDVAVVDDDGTPTPEGLQGRIVVTRTSPSMARTVWQNPARY
+FHSYWEDYADQSEAGWFLAGDGAKRDEDGDVWILGRVDDVINISGHRLSTIEIESALVAH
+PEVIEAGVCPVPHETTGHAAVAFVVAHESWLAGDDGPGASAADRAEELRRHVGRVIGPVA
+KPAEVVFVPDVPKTRSGKIMRRLLTQLHQGTALGDTTSLQNEPCVGQIAEVLRAGRRAQD
+AGPGAVRSASSAST
+>4_196
+MTAGDDGGRGAVVGVPTLVGPADQEEPPPMTPTEDPARPDPAEEGASGAVRGPNDGVPAA
+ALATLPGPLPQALVDAADPDVHPGRPADRLHGGRGDGRPVAESDRLAFWEAAGRRLSWER
+PFTRTRSLTAPDPAAERGPEIRWYEDGTLNVAVNCVDRHVAAGRGEKVALYFEGEPGDRR
+AVTYAQLQREVAQAANALEELGIEAGDRVVVYLPVLVETIVITLACARIGAVHSLVFGGF
+SAEALRFRVEDTGAKLLVTTDGQFRRGVAVPVKANADEAVSGDNAIEHVLVLDRTGHRDI
+PWTEGRDLWWHDVVDRQPDTHTPRAFDAEHPLFIMYTSGTTGQPKGLVHTSGGYLAAASW
+THDFLFSHPDPARRDDDVHWCTADLAWVTAHTYEIYGPLSNGVTQVIYEGVPNAPHPGRH
+FEVIERYRVTSYYTAPTLIRSLKGWHPDKIPAHADGGPDLSSIRLIGTVGESVNPEAWTW
+ARTQIGRDTPDLPMVDTWWQSETGATVLSPRPTDTAFKPGCGSRPLPGVDVAVVDDDGAP
+TPEGLQGRIVVTRTSPSMARTVWRNPARYFHSYWEDYADQGEAGWFLAGDGAKRDEDGDV
+WILGRVDDVINISGHRLSTIEIESALVAHPEVIEAGVCPVPHETTGHAAVAFVVAHESWL
+AGDDGPGASAADRAEELRRHVGRVIGPVAKPAEVVFVPDVPKTRSGKIMRRLLTQLHQGT
+ALGDTTSLQNEPCVGQIAEVLRAGRRAQDADTGAVRNASSAST
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000263.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000263.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3f97821b5dd8dc09c24d06ec53f50f7af0cc8c81
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000263.fa
@@ -0,0 +1,30 @@
+>0_188
+MTVLDRPGGRTAVGLIVPALLLLLWWALTAAGVFSGVQLPPPAWVAEAAVDLAARGTLWH
+HIAISVQRVLVGFLIGGALGLLVGSVLGLSRWADALLAPTIGALRAVPSLAWVPLLILWM
+QIGEESKVTLIAIGAFFPVFTTVYAALRHVDPHLVEAGRAYGYHGVRLLGTVQLPAVVPA
+MFSGLRLALAQAWLFLVAAELIASSMGLGFLLTDSQNNGRTDRLILAIILLAVLGKISDW
+LLGFVERWAVRRWA
+>1_196
+MSAALTTPAATTGPEARERSGHDDGDTGARRRQRPRVLDRPGARAVVGLAAPAVLLVLWW
+AVTAAGLLSAVQLPSPGAVLSAGVNLLERGDLWLHVGISTQRVLLGFLLGAALGLAVGSA
+LGLSRWADALFAPLIGALRAVPSLAWVPLLILWMQIGEESKVTLIAIGAFFPVFTTVYAA
+LRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVFSGLRLALAQAWLFLVAAELIASSM
+GLGFLLTDSQNNGRTDRLILAIILLAVLGKLTDWLLGLLERRALRRWA
+>2_130
+MSTALTTPAATTGPEARERSGHDDGGTGARRRQRSRVLDRPGARAVVGLAAPAVLLVLWW
+AVTAAGLLSAVQLPSPGAVLSAGVNLLERGDLWLHVGISTQRVLLGFLLGAALGLAVGSA
+LGLSRWADALFAPLIGALRAVPSLAWVPLLILWMQIGEESKVTLIAIGAFFPVFTTVYAA
+LRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVFSGLRLALAQAWLFLVAAELIASSM
+GLGFLLTDSQNNGRTDRLILAIILLAVLGKLTDWLLGLLERRALRRWA
+>3_2142
+MLDRPGTRAAVGLAAPAVLLVLWWAVTAAGLLSAVQLPSPGAVLSAGVNLLERGDLWLHV
+GISTQRVLLGFLLGAALGLAVGSALGLSRWADALFAPLIGALRAVPSLAWVPLLILWMQI
+GEESKVTLIAIGAFFPVFTTVYAALRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVF
+SGLRLALAQAWLFLVAAELIASSMGLGFLLTDSQNNGRTDRLILAIILLAVLGKLTDWLL
+GLLERRALRRWA
+>4_198
+MLDRPGTRAAVGLAAPAVLLVLWWAVTAAGLLSAVQLPSPGAVLSAGVNLLERGDLWLHV
+GISTQRVLLGFLLGAALGLAVGSALGLSRWADALFAPLIGALRAVPSLAWVPLLILWMQI
+GEESKVTLIAIGAFFPVFTTVYAALRHVDPHLVEAGRAFGYHGLSLLRTVQLPAVVPAVF
+SGLRLALAQAWLFLVAAELIASSMGLGFLLTDSQNNGRTDRLILAIILLAVLGKLTDWLL
+GLLERRALRRWA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000267.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000267.fa
new file mode 100644
index 0000000000000000000000000000000000000000..75be1e07e29db5cb90369d19e104fae312df089a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000267.fa
@@ -0,0 +1,49 @@
+>0_196
+MADHEFGFRTQALHAGAVPDAVHGSRAVPIHQTSSFVFESAEDAANLFALQKYGNIYSRI
+GNPTVAAFEERVATLEGGIGAVATASGMAAEFVTFAALAGAGDHIVASSKLYGGTITQLD
+VSLRRFGVETTFVDSVEAADFEAALQPNTKAVYTEIVANPSGDVVDLPGLADVAHRHGVP
+LVVDATLTPPYLIRPIEHGADIVIHSATKFLGGQGTTLGGVVVESGRFPWDNGKFPSMTE
+PVPSYGGVSWWGNFGEYGFLTKLRSEQLRDFGPSLAPQSAFQLLLGVETLAPRMDAHLAN
+ARAVATWLDEDPRVSWVRYAGLPDHPHHARAQQLLPRGVGSVFSFGVAPAATDTDDGASG
+PEAGRATASRFISALQLASHLANIGDAKTLVLHPATTTHQQLTAEQLVAAGIPADLIRIS
+VGIEDLEDILWDLDQALTEATGRTRDGAVVPAEQEA
+>1_186
+MITQPALHATGRRRVTLCDVPTLPPARLARDNGADCPEASIERTPVADHEFGFRTQALHA
+GAVPDAVHGSRAVPIHQTSSFVFESAEDAANLFALQKYGNIYSRIGNPTVAAFEERVATL
+EGGIGAVATASGMAAEFVTFAALAAAGDHIVASSKLYGGTITQLDVSLRRFGVETTFVDS
+AEAADFEAALQPNTKTVYTEIVANPSGDVVDLPGLADVAHRHGVPLVVDATLTPPYLIRP
+IEHGADIVIHSATKFLGGQGTTLGGVVVESGRFPWDNGKFPSMTEPVPSYGGVSWWGNFG
+EYGFLTKLRSEQLRDFGPSLAPQSAFQLLLGVETLAPRMDAHLANAQAVAQWLDEDPRVS
+WVRYAGLPDHPHHARAQQLLPRGVGSVFSIGVAPAATDTDDGASGPEAGRATASRFISAL
+QLASHLANIGDAKTLVLHPATTTHQQLTAEQLVAAGIPEDLIRISVGIEDTEDILWDLDQ
+ALTEATGRTRDDDGAPAAPKEA
+>2_143
+MITQPALHGTGLRRVTLCDVPTLPPAHLARDNGTDCPEASIERTPVADHEFGFRTQALHA
+GAVPDAVHGSRAVPIHQTSSFVFESAEDAANLFALQKYGNIYSRIGNPTVAAFEERVATL
+EGGIGAVATASGMAAEFVTFAALAGAGDHIVASSKLYGGTITQLDVSLRRFGVETTFVDS
+AEAADFEAALQPNTKAVYTEIVANPSGDVVDLPGLADVAHRHGVPLVVDATLTPPYLIRP
+IEHGADIVIHSATKFLGGQGTTLGGVVVESGRFPWDNGKFPSMTEPVPSYGGVSWWGNFG
+EYGFLTKLRSEQLRDFGPSLAPQSAFQLLLGVETLAPRMDAHLANARAVATWLDEDPRVS
+WVRYAGLPDHPHHARAQQLLPRGVGSVFSFGVAPAATDTDDGASGPEAGRATASRFISAL
+QLASHLANIGDAKTLVLHPATTTHQQLTAEQLVAAGIPADLIRISVGIEDLEDILWDLDQ
+ALTEATGRTRDGAVVPAEQEA
+>3_2133
+MITQPALHGTGRRRVTLCDVPTLPPAHLARDNGRDCPEASIERTPVADHEFGFRTQALHA
+GAVPDTVHGSRAVPIHQTSSFVFESAEDAANLFALQKYGNIYSRIGNPTVAAFEERVATL
+EGGIGAVATASGMAAEFVTFAALAAAGDHIVASSKLYGGTITQLDVSLRRFGVETTFVDS
+AEAADFEAALQPNTKTVYTEIVANPSGDVVDLPGLADVAHRHGVPLVVDATLTPPYLIRP
+IEHGADIVIHSATKFLGGQGTTLGGVVVESGRFPWDNGKFPSMTEPVPSYGGVSWWGNFG
+EYGFLTKLRSEQLRDFGPSLAPQSAFQLLLGVETLAPRMDAHLANAQAVAQWLDEDPRVS
+WVRYAGLPDHPHHARAQQLLPRGVGSVFSFGVAPAATDTDDGASGPEAGRATASRFISAL
+QLASHLANIGDAKTLVLHPATTTHQQLTAEQLVAAGIPEDLIRISVGIEDTEDILWDLDQ
+ALTEATGRTRDDDGAPAAPKEA
+>4_186
+MITQPALHGTGRPRVTLCDAPTLPPAHLARDNGTDCPEASIERTPVADHEFGFRTQALHA
+GAVPDAVHGSRAVPIHQTSSFVFESAEDAANLFALQKYGNIYSRIGNPTVAAFEERVATL
+EGGIGAVATASGMAAEFVTFAALAGAGDHIVASSKLYGGTITQLDVSLRRFGVETTFVDS
+AEAADFEAALQPNTKAVYTEIVANPSGDVVDLPGLADVAHRHGVPLVVDATLTPPYLIRP
+IEHGADIVIHSATKFLGGQGTTLGGVVVESGRFPWDNGKFPSMTEPVPSYGGVSWWGNFG
+EYGFLTKLRSEQLRDFGPSLAPQSAFQLLLGVETLAPRMDAHLANAQAVAQWLDEDPRVS
+WVRYAGLPDHPHHARAQQLLPRGVGSVFSFGVAPAATDTDDGASGPEAGRATASRFISAL
+QLASHLANIGDAKTLVLHPATTTHQQLTAEQLVAAGIPADLIRISVGIEDLEDILWDLDQ
+ALTEATGRARDGAVVPAEQEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000268.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000268.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2c6144725280aa4e7fd87fc0a69c57d5d8ead004
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000268.fa
@@ -0,0 +1,20 @@
+>0_197
+MSATHPERTWTGPSAPERLAILRRTRSIAIVGASDKPARASYFVATYLLSSTTYDVYFVN
+PVLAAAGQEILGHRVYASLDDLPVTPDLVEVFRKASDAPEMVADAARVGARTVWLQLGIW
+NEDAARQAEAAGLEIVMDRCVKIEHARFHGGLNLAGFVTGVISSRRQELDR
+>1_185
+MSTTHPERTWTGPGAPERLAILRRTRSIAIVGASDKPARASYFVATYLLSSTTYDVYFVN
+PVLAAAGKEILGHRVYASLDGLPVTPDLVEVFRKSSDAPEVVADAARVGARTVWLQLGIW
+NEDAARQAEAAGLEVVMDRCVKIEHARFHGGLNLAGFVTGVISSRRQELDR
+>2_144
+MSTTHPERTWTGPGAPERLAILRRTRSIAIVGASDKPARASYFVATYLLSSTTYDVYFVN
+PVLAAAGKEILGHRVYASLDDLPVTPDLVEVFRKSSDAPEVVADAARVGARTVWLQLGIW
+NEDAARQAEAAGLEIVMDRCVKIEHARFHGGLNLAGFVTGVISSRRQELDR
+>3_2132
+MSTTHPERTWTGPGAPERLAILRRTRSIAIVGASDKPARASYFVATYLLSSTTYDVYFVN
+PVLAAAGKEILGHRVYASLDDLPVTPDLVEVFRKSSDAPEVVADAARVGARTVWLQLGIW
+NEDAARQAEAAGLEVVMDRCVKIEHARFHGGLNLAGFVTGVISSRRQELDR
+>4_185
+MSTTHPERTWTGPGAPERLAILRRTRSIAIVGASDKPARASYFVATYLLSSTTYDVYFVN
+PVLAAAGKEILGHRVYASLDDLPVTPDLVEVFRKSSDAPEVVADAARVGARTVWLQLGIW
+NEDAARQAEAAGLEVVMDRCVKIEHARFHGGLNLAGFVTGVISSRRQELDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000274.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000274.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9377a87fef9cb8bbe124477693e49a2f1a97c801
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000274.fa
@@ -0,0 +1,55 @@
+>0_207
+MAVGFTQHDPSRTIRAPRGTELSAKSWQTEAPLRMLMNNLDPEVAERPEDLVVYGGTGRA
+ARSWEAYDAIVATLKDLEEDETLLVQSGKPVGVFRTNKWAPRVLIANSNLVGDWATWPEF
+RKLEAEGLMMYGQMTAGSWIYIATQGILQGTYETFAAIGRKRYDGSLKGTLTLTGGCGGM
+GGAQPLAVTLNGGACLIVDVSEGRLRRRMGKRYLDEVVTDIDKAVERVMQAKRDGEAVSV
+GLVGNAAEVFPELLERQKRGEIEIDIVTDQTSAHDPLSYLPIEIDEADWQAEAEGDPETF
+TKKAQESMARQVEAMVGFQDIGAEVFDYGNSIRDEARKAGYSRAFEFPGFVPAYIRPLFC
+EGLGPFRWAALSGDPEDIRVTDEALKELFPENEHLHRWLDGAAEFVEFEGLPARICWLGY
+GERHKAGLLFNQLVAEGKVKAPIVIGRDHLDSGSVASPYRETESMLDGSDAIADWPLLNA
+LTATSSGATWVSIHHGGGVGIGRSIHAGQVGLADGTELAAAKLEALLTNDPGMGVIRHVD
+AGYSRAAEIAAERGVRVPMEATIRD
+>1_176
+MAVGFTQHDPSRTIRAPRGTELSAKSWQTEAPLRMLMNNLDPEVAERPEDLVVYGGTGRA
+ARSWEAYDAIVATLKDLEEDETLLVQSGKPVGVFRTNKWAPRVLIANSNLVGDWATWPEF
+RELEAEGLMMYGQMTAGSWIYIATQGILQGTYETFAAIGRKRYDGSLQGTLTLTGGCGGM
+GGAQPLAVTLNGGVCLIVDVSEDRLRRRMGKRYLDEVETDIDKAVERVMQAKNDGEAVSV
+GLVGNAAEVFPELLERQKAGTVEIDIVTDQTSAHDPLSYLPIEIDEKDWHAEAEADPDTF
+TKKAQESMARQVEAMVGFQDIGAEVFDYGNSIRDEARKAGYSRAFEFPGFVPAYIRPLFC
+EGLGPFRWAALSGDPEDIRVTDEALKELFPENEHLHRWLDGAAEFVEFEGLPARICWLGY
+GERHKAGLLFNQLVAEGKVKAPIVIGRDHLDSGSVASPYRETESMLDGSDAIADWPLLNA
+LTATSSGATWVSIHHGGGVGIGRSIHAGQVGVADGTELAAAKLEALLTNDPGMGVIRHVD
+AGYSRAAEVAKERGVRVPMEATIRD
+>2_152
+MAAGFTQHDPSRTIRAPRGTELNAKSWQTEAPLRMLMNNLDPEVAERPEDLVVYGGTGRA
+ARSWEAFDAIVETLKDLEEDETLLVQSGKPVGVFRTNVWAPRVLIANSNLVGDWADWKTF
+RELEAEGLMMYGQMTAGSWIYIATQGILQGTYETFAAIGRKKYDGTLKGTLTLTGGCGGM
+GGAQPLAVTLNGGVCLIVDVSEERLRRRMGKRYLHEVETDIDAAIARVMQAKRDGEAVSV
+GLVGNAAEVFPELLKRQKAGEVEIDIVTDQTSAHDPLSYLPIEIEEKDWHAEAEADPDTF
+TKKAQESMARQVEAMVGFQDIGAEVFDYGNSIRDEARKAGYSRAFEFPGFVPAYIRPLFC
+EGLGPFRWAALSGDPEDIRVTDEALKELFPENEHLHRWLDGAAEFVEFEGLPARICWLGY
+GERHKAGLLFNQLVAEGKVKAPIVIGRDHLDSGSVASPYRETESMLDGSDAIADWPLLNA
+LTATSSGATWVSIHHGGGVGIGRSIHAGQVGLADGTELAAAKLTALLTNDPGMGVIRHVD
+AGYSRAVEVAAERGVRIPMEPTVRD
+>3_2123
+MAEGFTQHDPSRTIRAPRGTELSAKSWQTEAPLRMLMNNLDPEVAERPEDLVVYGGTGRA
+ARSWEAYDAIVATLKDLEEDETLLVQSGKPVGVFRTNKWAPRVLIANSNLVGDWATWPEF
+RKLEAEGLMMYGQMTAGSWIYIATQGILQGTYETFAAIGRKRYDGSLQGTLTLTGGCGGM
+GGAQPLAVTLNGGVCLIVDVSEDRLRRRMGKRYLDEVETDIDKAVERVMQAKRDGEAVSV
+GLVGNAAEVFPELLERQKAGTVEIDIVTDQTSAHDPLSYLPIEIDEKDWHAEAEADPDTF
+TKKAQESMARQVEAMVGFQDIGAEVFDYGNSIRDEARKAGYSRAFEFPGFVPAYIRPLFC
+EGLGPFRWAALSGDPEDIRVTDEALKELFPENEHLHRWLDGAAEFVEFEGLPARICWLGY
+GERHKAGLLFNQLVAEGKVKAPIVIGRDHLDSGSVASPYRETESMLDGSDAIADWPLLNA
+LTATSSGATWVSIHHGGGVGIGRSIHAGQVGVADGTELAAAKLEALLTNDPGMGVIRHVD
+AGYSRAVEVAAERGVRVPMEATIRD
+>4_173
+MAVGFTQHDPSRTIRAPRGTELSAKSWQTEAPLRMLMNNLDPEVAERPEDLVVYGGTGRA
+ARSWEAYDAIVATLKDLEEDETLLVQSGKPVGVVKTNVWAPRVLIANSNLVGDWADWKTF
+RELEAEGLMMYGQMTAGSWIYIATQGILQGTYETFAAIGRKRYDGSLKGTLTLTGGCGGM
+GGAQPLAVTLNGGVCLIVDVSEDRLRRRMGKRYLDEVETDIERAVERVMQAKRDGEAVSV
+GLVGNAAEVFPELLERQKAGTVEIDIVTDQTSAHDPLSYLPIEIDEKDWHAEAEADPDTF
+TKKAQESMARQVEAMVGFQDIGAEVFDYGNSIRDEARKAGYSRAFEFPGFVPAYIRPLFC
+EGLGPFRWAALSGDPEDIRVTDAALKELFPENEHLHRWLDGAAEFVEFEGLPARICWLGY
+GERHKAGLLFNQLVAEGKVKAPIVIGRDHLDSGSVASPYRETESMLDGSDAIADWPLLNA
+LTATSSGATWVSIHHGGGVGIGRSIHAGQVGVADGTELAAAKLEALLTNDPGMGVIRHVD
+AGYSRAAEVAKERGVRVPMEATIRD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000275.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000275.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5ca18790e4b75fcbf5cb4ed171676054b3a742b8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000275.fa
@@ -0,0 +1,25 @@
+>0_208
+MTTTPTASTRTVDRALDLLAAVTEQPRLSLTEAARATELPASTALRLLRSLEGSGFVARD
+DDGAYRPGVRLIQLGARAFSRDSLVQLARGPMDHVVAATGESVYLSVTTPPASAVYLAIV
+EGTHSVRHTNWVGRTVPLAGTAVGDALRGSVAAGDYTLRTRSVEKDVTSLSAPISVAGTV
+VGALSTLVPAYRCTDELADRCGAALVAATDELAHLLGAADTPRERPADSPGKPKASS
+>1_175
+MTTTPTASTRTVDRALDLLAAVTEQPRLSLTEAARATELPASTALRLLRSLEGSGFVARD
+DDGAYRPGVRLIQLGARAFSRDSLVQLARGPMDHVVAATGESVYLSVATPPDSAVYLAIV
+EGTHSVRHTNWVGRTVPLAGTAVGDALRGSVAAGDYTLRTRSVEKDVTSLSAPISVAGTV
+VGALSTLVPAYRCTDELADRCGAALVAATHELAHLLGAADTPRERPADSPGKPKARS
+>2_153
+MPTTPPASTRTVDRALALLAAVVAQPRLSLAEAARATDLPASTALRLLRSLETAGFVDRQ
+EEGEYRPGARLIQLGARAFSREPLVRLARAPMDGVAEATGESVYLSLRNGAQEAVYIAIV
+EGTHSVRHASWVGRTVPLEGTAVGEVYRGEVPPGGYAHGGHSVEQDVTALSSPVVVGGRV
+VAALSALVPDYRCTAEHADRCGRALAGATTRLASALGEEAPPEDAD
+>3_2122
+MTTTPTASTRTVDRALDLLAAVTEQPRLSLTEAARATELPASTALRLLRSLEGSGFVARD
+DDGAYRPGVRLIQLGARAFSRDSLVQLARGPMDHVVAATGESVYLSVTTPPDSAVYLAIV
+EGTHSVRHTNWVGRTVPLAGTAVGDALRGSVAAGDYTLRTRSVEKDVTSLSAPISVAGTV
+VGALSTLVPAYRCTDELADRCGAALVAATGELAHLLGAADTPRERPADSPGKPKASS
+>4_172
+MTTTPTASTRTVDRALDLLAAVTEQPRLSLTEAARATELPASTALRLLRSLEGSGFVARD
+DDGAYRPGVRLIQLGARAFSRDSLVQLARGPMDHVVAATGESVYLSVTTPPDSAVYLAIV
+EGTHSVRHTNWVGRTVPLAGTAVGDALRGSVAAGDYTLRTRSVEKDVTSLSAPISVAGTV
+VGALSTLVPAYRCTDELADRCGAALVAATHELAHLLGAADTPRERPADSPGKPKASS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000276.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000276.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c8a92cb4150016902f8fedda814fac5622671bc4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000276.fa
@@ -0,0 +1,20 @@
+>0_209
+MTINADGSHAVQPHSANAHTAPASPARHAVVEEEVLEPLRPVDGWGFTNRVILVSVLVVI
+IGDVVRVLTGGLGDPNGSVALGETGRGWVVLVQSFMFGLVGGALAGAAGYLIVLLMGGAA
+RSVVPYVVGGVVGGFLGAVGVFAVFSNTALYGSGLHLYWMLPVAGLLGGLWAGVVSSRR
+>1_174
+MTINADGSHAVQPHTANAHTTPARPVRHAVVEEEVLEPLRPVDGWGFTNRVILVSVLVVI
+IGNVVRVLTGGLGDPNGSVALGETGHGWVVLVQSFMFGLVGGALAGAAGYLVVLLMGGAA
+RSVVRYVVGGVVGGFLGAVGLFAVFSNTVVYGSGVHLFWMLPVAGLLGGLWAGLVSSRR
+>2_154
+MNTQAHGAHAVQTVGGTAAPQAPARRAVVAPEAVEPARPVDGWGFVNRILVVATVLIVAF
+ELWRAATGLLSDGPRVLGEDGVGWVAVLEAFMFALVGGAIAGAAGYGIVLLMGGAARSAA
+RYAIGGLIGGFLAAVGVIFVFSNTAALSVGGHLFWMLPLAGLIGGVWAGITSAKS
+>3_2121
+MTINADGSHAVQPHAANAHTAPARPVRHAVVEEEVLEPLGPVEGWGFTNRVILVSVLVVI
+IGNVVRVLTGDLGDPNGSVALGETGHGWVVLVQSFMFGLVGGALAGAAGYLVVLLMGGAA
+RSVVRYVVGGVVGGFLGAVGLFAVFSNTVLYGAGLHLFWMLPVAGLLGGLWAGVVSSRR
+>4_171
+MTINADGSHAVQPHAANAHTAPARPVRHAVVEEEVLEPLGPVEGWGFTNRVILVSVLVVI
+IGNVVRVLTGDLGDPNGSVALGETGHGWVVLVQSFMFGLVGGALAGAAGYLVVLLMGGAA
+RSVVRYVVGGVVGGFLGAVGLFAVFSNTVLYGAGLHLFWMLPVAGLLGGLWAGVVSSRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000278.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000278.fa
new file mode 100644
index 0000000000000000000000000000000000000000..088491b8b6600687be00b78035f567870f599c77
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000278.fa
@@ -0,0 +1,70 @@
+>0_211
+MTTQQPDIPGTPGPRTPDLEERTAPTSSDDAAMPAPDQRGPASVSPTGQDTGADPATAAQ
+GCPYLTTAHGVRLQDSDHSLKAGRRGPTLLQDHHLREKLSHFDHERIPERVVHARGAGAH
+GMFRGYGTAAKISRAGLFAKDKETEVFVRFSTVAGSRGSMDLARDTRGFATKFYTDEGTW
+DLVGNNMPVFFVQDAIKFPDVVHSVKPHPDREIPQAQSAHDTFWDFVSLHTEAQHHTIWN
+MSDRGIPRSFRMMEGFGVHTYRLIAADGSTVLVKFHWKPKLGVHSVTWEEALITNGADPD
+YHRRDLADAIEAGAFPEWELGVQVFEDTEEQMFEGIDLLDPTKLVPEELVPVQPLGRMTL
+NANPSNYFAETEQVAFNPANLVPGIDVTNDPLLQGRLFSYLDTQLTRLGGPNWTQLPINR
+PHAPVNDMLRDGFHQSAVHRGVAPYRPNSLDGGLPYETPADDHALIEHPEPLPASVKERA
+HAASFDDHFSQARLFFLSLSEVEREHVAQAYTFELGKCYEQTIRERQLAHLAAIDTRLAQ
+QVADGLGIPVPAPTETPADVQPSPVLSQIGGVWPLDGRQVGVVVGESVDEKELDALVQGI
+HGAGMVPLVIAPKGGPVAGEIVAQRTYLTAASIELDAVVVASPAAPAADAAPGLDEKAGA
+AASEAVDPRVVKVLQEMWRHSKAILALEPAEGVLAAAQVSGKGVESAADGASAVSRLTEL
+LPAHRVWERFGTTGRFAD
+>1_172
+MTTQQPDIPGTPGPITPDLEEHTALTHPDQPVAVPAPDQRGPAQVSPTGQDTGADPATAA
+QGCPYLTTAHGVRLQDSDHSLKAGRRGPTLLQDHHLREKLSHFDHERIPERVVHARGAGA
+HGVFRGYGTAAKISRAGLFAKDKETEVFVRFSTVAGSRGSMDLARDTRGFATKFYTDEGT
+WDLVGNNIPVFFVQDAIKFPDVVHSVKPHPDREIPQAQSAHDTFWDFVSLHTEAQHHTLW
+NMSDRGIPRSYRMMEGFGVHTYRLIAADGSTVLVKFHWKPMLGVHSVTWEEALLTNGMDP
+DFHRRDLADAIEAGAFPEWELGVQVFEDNEEQMFEGIDLLDPTKLVPEELAPVQPLGRMT
+LNANPSNYFAETEQVAFNPANLVPGIDVTNDPLLQGRLFSYLDTQLTRLGGPNWNQLPIN
+RPHAPVNDMLRDGFHQSAVHRGVAPYRPNSLDGGLPYETPADDHAFIEHPEPLPASVKER
+AHAASFDDHFSQARLFFLSLSEVEREHVAQAYTFELGKCYEQTIRERQLAHLAAIDTRLA
+QQVADGLGIPVPAPTETPADVQPSPVLSQIGGAWPLDGRQVGVVVGESVDEKELDALVQG
+IHGAGMVPLVIAPKGGPVAGEIVAQRTYLTAASIELDAVVVASPAAPAADAAPGLDQKAG
+AADPEAVDPRVIKVLQEMWRHSKAILALEPAEAVLAAAQVSGKGVESAADGASAVSRLTE
+LLPAHRVWDRFPTTGRLAD
+>2_156
+MAEQPKIPGTPGPITPDLEEHTALTDPDQPVAVPAPDQRGPAQVSPTGQDTGADPATAAQ
+GCPYLTTAHGVRLQDSDHSLKAGRRGPTLLQDHHLREKLSHFDHERIPERVVHARGAGAH
+GVFRGYGTAAKISRAGLFAKDKETEVFVRFSTVAGSRGSMDLARDTRGFATKFYTDEGTW
+DLVGNNMPVFFVQDAIKFPDVVHSVKPHPDREIPQAQSAHDTFWDFVSLHTEAQHHTIWN
+MSDRGIPRSFRMMEGFGVHTYRLIAADGSTVLVKFHWKPKLGVHSVTWEEALITNGADPD
+YHRRDLADAIEAGAFPEWELGVQVFEDNEEQMFEGIDLLDPTKLVPEELVPVQTLGLMTL
+NANPSNYFAETEQVAFNPANLVPGIDVTNDPLLQGRLFSYLDTQLTRLGGPNWTQLPINR
+PHAPVNDMLRDGFHQSAVHRGVAPYRPNSLDGGLPYETPADDHALIEHPEPLPASVKERA
+HAASFDDHFSQARLFFLSLSEVEREHVAQAYTFELGKCYEETIRVRQLQNLGAIDPRLAQ
+QVADGLGMPVPAPADAPADVQPSAALSQVGGTWPLDGRQVGLVVGPQVDEKELGDAVQGI
+HGAGMVPLVIAPKGGPVAGEVVAQRAYLTAASIELDAVVVLGATPPAGDAQHGLDAKAAA
+DAPDAVDPRVAKLVQEAWRHAKAIVAVGEGTSVLDELGLTGTPGVLTVDAGADAVAQLKE
+LMPAHRVWERFPTTGRLAD
+>3_2119
+MTTQQPDIPGTPGPITPDLEEHTALTHPDQPVAVPAPDQRGPAQVSPTGQDTGADPATAA
+QGCPYLTTAHGVRLQDSDHSLKAGRRGPTLLQDHHLREKLSHFDHERIPERVVHARGAGA
+HGVFRGYGTAAKISRAGLFAKDKETEVFVRFSTVAGSRGSMDLARDTRGFATKFYTDEGT
+WDLVGNNIPVFFVQDAIKFPDVVHSVKPHPDREIPQAQSAHDTFWDFVSLHTEAQHHTLW
+NMSDRGIPRSYRMMEGFGVHTYRLIAADGSTVLVKFHWKPMLGVHSVTWEEALLTNGMDP
+DFHRRDLADAIEAGAFPEWELGVQVFEDNEEQMFEGIDLLDPTKLVPEELAPVQPLGRMT
+LNANPSNYFAETEQVAFNPANLVPGIDVTNDPLLQGRLFSYLDTQLTRLGGPNWNQLPIN
+RPHAPVNDMLRDGFHQSAVHRGVAPYRPNSLDGGLPYETPADDHAFIEHPEPLPASVKER
+AHAASFDDHFSQARLFFLSLSEVEREHVAQAYTFELGKCYEQTIRERQLAHLAAIDTRLA
+QQVADGLGIPVPAPTETPADVQPSPVLSQIGGAWPLDGRQVGVVVGESVDEKELDALVQG
+IHGAGMVPLVIAPKGGPVAGEIVAQRTYLTAASIELDAVVVASPAAPAADAAPSLDQKAG
+AADSEAVDPRVVKVLQEMWRHSKAILALEPAEAVLAAAQVSGKGVESAADGASAVSRLTD
+LLPAHRVWERFPTTGRLAD
+>4_169
+MTTQQPDIPGTPGPITPDLEEHTALTHPDQPVAVPAPDQRGPAQVSPTGQDTGADPATAA
+QGCPYLTTAHGVRLQDSDHSLKAGRRGPTLLQDHHLREKLSHFDHERIPERVVHARGAGA
+HGVFRGYGTAAKISRAGLFAKDKETEVFVRFSTVAGSRGSMDLARDTRGFATKFYTDEGT
+WDLVGNNIPVFFVQDAIKFPDVVHSVKPHPDREIPQAQSAHDTFWDFVSLHTEAQHHTLW
+NMSDRGIPRSYRMMEGFGVHTYRLIAADGSTVLVKFHWKPMLGVHSVTWEEALLTNGMDP
+DFHRRDLADAIEAGAFPEWELGVQVFEDNEEQMFEGIDLLDPTKLVPEELAPVQPLGRMT
+LNANPSNYFAETEQVAFNPANLVPGIDVTNDPLLQGRLFSYLDTQLTRLGGPNWNQLPIN
+RPHAPVNDMLRDGFHQSAVHRGVAPYRPNSLDGGLPYETPADDHAFIEHPEPLPASVKER
+AHAASFDDHFSQARLFFLSLSEVEREHVAQAYTFELGKCYEQTIRERQLAHLAAIDTRLA
+QQVADGLGIPVPAPTETPADVQPSPVLSQIGGAWPLDGRQVGVVVGESVDEKELDALVQG
+IHGAGMVPLVIAPKGGPVAGEIVAQRTYLTAASIELDAVVVASPAAPAADAAPGLDQKAG
+AADSEAVDPRVVKVLQEMWRHSKAILALEPAEAVLAAAQVSGKGVESAADGASAVAALKQ
+LLPAHRVWDRFPTTGRLAD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000283.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000283.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8572903926abf838dc5187653033233b0a89017a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000283.fa
@@ -0,0 +1,39 @@
+>0_223
+MREARESASAEGTPRAQPRQALETLGPGIRDGAATTAWENTAAVRNDTVSVMDCTRDVLD
+QRTLDAVATHIPDGSNIEIVQLFAAQDETHEFLTCAYNGYFEYSPGMPLAQVQYQHNLDS
+TRLDWCEDEPATVADEYTFDPETGKGLLALLRPGMIGGQDGAPLMPQRTAWACSEDGTEL
+VSVTMGSMEGYGDANGGLTQVENSPVAGSTTLVTEARDHLADTVLKDASRFHEVIKLSSP
+FFLNASMDEESLAKAREIPTGRVPDELLNNQSTIDRPEGAPGPVAPGQPPRPFQGAAREA
+AESQRAAEASASAAEASASRAASGSGTPSPSSTPASRTPSPSGTGG
+>1_142
+MTHPAPARRRAPLAVGVAALALALAGCGSAGQSGEPASSTAAAPSGSAASAAAGSATESP
+TDPASAAASRVREALASESAEGTPRAEPRQAFETVGPGIKDGAATEAWKNTAAVRNDTVS
+VMDCTRDVLDQRTLDAVATHIPDSSNIEIVQLFASQDETHEFLTCVYNGYFEYSPGMPLA
+QVHYQHNLDGSRLEWCQEEPAAVADEYTFDPKTGKGLLALLRPGMVGGQDGAPLLPQRTA
+WACSEDGSEMVSVTMGSMEGFGDANGGLTQVKNSPVAQSTTLVTETRDHLADTVLKDAGD
+FQEVIKLSSPFFLNAQMDEETLAQAREIPTGRVPDELLNNQSTIDRPEGAPGPVAPGQPP
+RPFQGAAREAAESQRAAEASASASASPSPTKSASASASPSPSTSGD
+>2_162
+MTHPTSAPHRAAAALGAAALALTLAGCSDSGQPSPASSTSTATAAAGSSASATGDPQSPA
+SAAASEIRAARASEKADGSERPQPREALETQGPGITSGAASAGWKSVAARYNDTVSVMDC
+TQDVLDQTTLDAVATHIPVANDIGIVQLFASRDQTHEFLTCQYQGSSSRSEGAPLVMVHY
+QHNLDGRRLEWCRPEAPVMADEYSYDESTRKGLLALLRPGMVGGADGAPLLPQRTAWACN
+EDGTQLVSVTFGAMKGYGSVNEGLTQVTNSPIANSTTLATQARDHLADTVLKDPSDFQAD
+IETSSPFFLNAQTDQETLDKAKGLPTGIIPQDQLSDQSTIDRPEGAPEPVAPGQPPRPFV
+GAARDAAESAAAESAASSSGSDSASPSDDGDGNPVVSESGTPSPSNTTD
+>3_2107
+MTHPAPARRRAPLAVGVAALALALAGCGSAGQSGEPASSTAAAPSGSAASAAAGSATESP
+TDPASAAASRVREALASESAEGTPRAEPRQAFETVGPGIKDGAATEAWKNTAAVRNDTVS
+VMDCTRDVLDQRTLDAVATHIPDSSNIEIVQLFASQDETHEFLTCVYNGYFEYSPGMPLA
+QVHYQHNLDGSRLEWCQEEPAAVADEYTFDPKTGKGLLALLRPGMVGGQDGAPLLPQRTA
+WACSEDGSEMVSVTMGSMEGFGDANGGLTQVKNSPVAQSTTLVTETRDHLADTVLKDAGD
+FQEVIKLSSPFFLNAQMDEETLAQAREIPTGRVPDELLNNQSTIDRPEGAPGPVAPGQPP
+RPFQGAAREAAESQRAAEASASASASPSPTKSASASPSPSTSGD
+>4_150
+MTHPAPARRRAPLAVGVAALALALAGCGSAGQSGEPASSTAAAPSGSAASAAAGSATESP
+TDPASAAASRVREALASESAEGTPRAEPRQAFETVGPGIKDGAATEAWKNTAAVRNDTVS
+VMDCTRDVLDQRTLDAVATHIPDSSNIEIVQLFASQDETHEFLTCVYNGYFEYSPGMPLA
+QVHYQHNLDGSRLEWCQEEPAAVADEYTFDPKTGKGLLALLRPGMVGGQDGAPLLPQRTA
+WACSEDGSEMVSVTMGSMEGFGDANGGLTQVKNSPVAQSTTLVTETRDHLADTVLKDAGD
+FQEVIKLSSPFFLNAQMDEETLAQAREIPTGRVPDELLNNQSTIDRPEGAPGPVAPGQPP
+RPFQGAAREAAESQRAAEASASASASPSPTKSTSASPSPSTSGD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000284.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000284.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e38141a9395d713d0c6f7b507bfd39c3735e53dc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000284.fa
@@ -0,0 +1,55 @@
+>0_224
+MTTTTVTSGRHHAAPALHHTDEPVDTAAHTPLPHDVSTQALPVVAPAGAAPVVTVHGPVT
+DRQAEILTEDALAFLGRLHRVAEDRRRRLLEEREFTRQRITEGWDPHFLRATKRVREDDS
+WRVAPLAPGLKDRRVEITGPVDRKMTVNALNSGATGWLADFEDSSTPSWERMLDGQVNLY
+DAIRGRIDFTSPEGKEYRLRGAELTDRPTIIVRPRGWHLTDDHLRVDGEPMAGGLVDFGL
+YFFHNAAELVRRGHGPYFYLPKLESHLEARLWNCVFVAAQDALGIPQGTIRATVLIETIT
+AAFQMEEILYQLRNHAAGLNAGRWDYIFSLIKNYRDRGPAYVLPDRAEVTMTQPMMRSYT
+EQLVRACHRRGASAIGGMSAVIPDRRDQAANEVAFAKVREDKTREARDGFDGSWVAHPDL
+VPVAREVFDEVLGEAPNQIRTRRREDVEPDEAGLLDVAATTGSVTEAGVRRNIEVAMRYV
+ESWLRGQGAAAIHGLMEDAATAEISRSQIWQWAHNRTAVALEDGGTRTASREWMEQLVRE
+EHARILAGPLPEGHRFEDARRVFCESALPPEYPAFLTLGAYRRHFSAERA
+>1_141
+MSPQTTTPTLHEIHADDVREHTPLPHDVSTQAIPVVIPEGAAPVVTVHGPVDGRQAEILT
+DEALAFLGRLHRLAEDRRRRLLEEREYTRRRITDGWNPHYLRSTRRVREDDSWRVAPLAP
+GLQDRRVEITGPVDRKMTINALNSGASGWLADFEDSSTPSWDRMLDGQVNLFDAIRDQID
+FTSPEGKEYRLRERELTDRPTIIVRPRGWHLLEDHIRVDGEPMAGALVDFGLYFFHNADE
+LIRRGHGPYFYLPKLESHLEARLWNCVFVAAQDELGIPQGTIRATVLIETITAAFQMEEI
+LYQLRNHAAGLNAGRWDYIFSIIKNFRDRGAEFVLPDRSEVTMTQPMMRAYTEQLVRACH
+RRGASAIGGMSAVIPDRRNEEANAAALEKVRADKAREAGDGFDGSWVAHPDLVPVAREEF
+DAVLGEAPNQIRTRRREDVEPDEAALLDVAATTGSVTEAGVRMNIEVGIRYIESWLRGNG
+AAAIHGLMEDAATAEISRSQIWQWAHNGTGVQLTEGGVRTANRGWMEQLIREEHARILAG
+PLPEGHRFEDAVRVFCESALPPEYPAFLTLGAYRRHFASQDDAAAKA
+>2_801
+MMTLQTTHSDTTVNGVRVLGEPVPGQDRVLTSAALEFLAALHRGVEGRRRELMDERAARR
+RRIAEGETLDFLPATRKVREDDSWHVAPLAPGLRDRRVEITGPVDRKMTINAMNSGAKCW
+LADFEDSSTPSWENVIAGQVNLQDAIRRTISLTTPEGKEYTLGGVQLVDRPTIIVRPRGL
+HLMEDRILVDGQPVSGALADFALYFFHNAKELLRRGRGPYFYLPKTESHLEARWWNCVFV
+RAQDLLEIPQGTIRATVLIETITAAFEMEEILYQLRNHAAGLNAGRWDYIFSVIKTFRER
+GEDFVLPDRSEVTMTQPMMRAYTELLVRTCHRRGASAIGGMAAQIPNRKDPEANAAALEK
+VRSDKTREAGDGFDGSWVAHPDLVPVAMEVFDAVLKDLPNQIRTRRREDVVPDAAALVDI
+KSTTGSITEQGLRMNIEVGIRYVESWLRGNGAAAIHNLMEDAATAEISRSQIWQWIRTGS
+TARLTDGGERTVTREWVEQVTEEEFGRIERTEGDRFDDAREIFTSVALAEDFPDFLTLPA
+YERFLSAEARRRAGHGA
+>3_2106
+MSPQTTTPTLHEIHADDVREHTPLPHDVSTQAIPVVIPEGAAPVVTVHGPVDGRQAEILT
+DEALAFLGRLHRLAEDRRRRLLEEREYTRRRITDGWNPHYLRSTRRVREDDSWRVAPLAP
+GLQDRRVEITGPVDRKMTINALNSGASGWLADFEDSSTPSWDRMLDGQVNLFDAIRDRID
+FTSPEGKEYRLRERELTDRPTIIVRPRGWHLLEDHIRVDGEPMAGALVDFGLYFFHNADE
+LIRRGHGPYFYLPKLESHLEARLWNCVFVAAQDELGIPQGTIRATVLIETITAAFQMEEI
+LYQLRNHAAGLNAGRWDYIFSIIKNFRDRGAEFVLPDRSEVTMTQPMMRAYTEQLVRACH
+RRGASAIGGMSAVIPDRRNEEANAAALEKVRADKAREAGDGFDGSWVAHPDLVPVAREEF
+DAVLGEAPNQIRTRRREDVVPDEAALLDVAATTGSVTEAGVRMNIEVGIRYIESWLRGNG
+AAAIHGLMEDAATAEISRSQIWQWAHNGTGVQLTEGGVRTANRGWMEQLIREEHARILAG
+PLPEGHRFEDAVRVFCESALPPEYPAFLTLGAYRRHFAGQDDAAAKA
+>4_149
+MSPQTTTPTLHEIHADDVREHTPLPHDVSTQAIPVVIPEGAAPVVTVHGPVDGRQAEILT
+DEALAFLGRLHRLAEDRRRRLLEEREYTRRRITDGWNPHYLRSTRRVREDDSWRVAPLAP
+GLQDRRVEITGPVDRKMTINALNSGASGWLADFEDSSTPSWDRMLDGQVNLFDAIRDQID
+FTSPEGKEYRLRERELTDRPTIIVRPRGWHLLEDHIRVDGEPMAGALVDFGLYFFHNADE
+LIRRGHGPYFYLPKLESHLEARLWNCVFVAAQDELGIPQGTIRATVLIETITAAFQMEEI
+LYQLRNHAAGLNAGRWDYIFSIIKNFRDRGAEFVLPDRSEVTMTQPMMRAYTEQLVRACH
+RRGASAIGGMSAVIPDRRNEEANAAALEKVRADKAREAGDGFDGSWVAHPDLVPVAREEF
+DAVLGEAPNQIRTRRREDVVPDEAALLDVAATTGSVTEAGVRMNIEVGIRYIESWLRGNG
+AAAIHGLMEDAATAEISRSQIWQWAHNGTGVQLTEGGVRTANRGWMEQLIREEHARILAG
+PLPEGHRFEDAVRVFCESALPPEYPAFLTLGAYRRHFAGQDDAAAKA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000285.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000285.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c7ac85f70c4b48b64491128228b6f761af6a7589
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000285.fa
@@ -0,0 +1,45 @@
+>0_225
+MTTQPHHSTPASAEQLQHDWDHNPRWAGIERTYSPDDVVRLRGRIQEEHTLARRGAEKLW
+TQLKDENARGDFTNALGALTGNQAVQQVKAGLRAIYLSGWQVAADANLSGHTYPDQSLYP
+ANSVPQVVRRINNALLRADQIEHAEGVSSVEDWLVPIVADAEAGFGGPLNAYELMKSMIT
+AGASGVHWEDQLASEKKCGHLGGKVLIPTGQHIRTLNAARLAADVADVPSVIIARTDAEA
+ATLITSDVDERDAEFITGERTAEGFYKVRNGVEPCIARAKAYAPHADLIWMETGTPDLEL
+ARKFAEAVKAEFPDQMLAYNCSPSFNWKKNLDDDTIAKFQRELGAMGYTFQFITLAGFHA
+LNHSMFDLAKGYHERQMSAYVELQEREFADEARGYTATKHQREVGTGYFDAVSTAINPDS
+STVALAGSTESGQFH
+>1_140
+MTTQPHHSTPASAEQLQHDWDNNPRWAGVERSFTAEDVVRLRGRIQEEHTLARRGAEKLW
+TQLKDENARGEFTNALGALTGNQAVQQVKAGLRAIYLSGWQVAADANLSGHTYPDQSLYP
+ANSVPQVVRRINNALLRADQIEHAEGVSSVEDWLVPIVADAEAGFGGPLNAYELMKSMIT
+AGASGVHWEDQLASEKKCGHLGGKVLIPTGQHIRTLNAARLAADVADVPSVIIARTDAEA
+ATLITSDVDERDAEFITGERTAEGFYKVRNGVEPCIARAKAYAPHADLIWMETGTPDLEL
+ARKFAEAVKAEFPDQMLAYNCSPSFNWKKNLDDDTIAKFQRELGAMGYTFQFITLAGFHA
+LNHSMFDLAKGYNERQMSAYVELQEREFADEARGYTATKHQREVGTGYFDAVSTAINPDS
+STVALAGSTESGQFH
+>2_802
+MTEQTVQQIAQEIQKDWDTNDRWTHIERTHTAEDVAKLRGRVQEEHTLARRGSEKLWEQL
+TSEHAKGEFTNALGALTGNQAVQQVKAGLRAIYLSGWQVAADANLSGHTYPDQSLYPANS
+VPAVVRRINNALLRADQIEWSEGIKTVEDYLVPIVADAEAGFGGPLNAYELMKGMIASGA
+SGVHWEDQLASEKKCGHLGGKVLIPTGQHVRTLNAARLAADVAGVPSVIIARTDAEAATL
+ITSDVDERDAEFITGERTAEGFYKVKNGVEPCIARAKAYAPYSDLIWMETGTPDLELARK
+FAEAVKSEFPDQMLSYNCSPSFNWKKNLDDATIAKFQRELGAMGYTFQFITLAGFHALNH
+SMFDLAKGYNERQMSAYVELQEREFADEARGYTATKHQREVGTGYFDAISTAVNPESSTV
+ALKESTEAGQFH
+>3_2105
+MTTQPHHSTPASAEQLQHDWDNNPRWAGVERSFTAEDVVRLRGRIQEEHTLARRGAEKLW
+TQLKDENARGEFTNALGALTGNQAVQQVKAGLRAIYLSGWQVAADANLSGHTYPDQSLYP
+ANSVPQVVRRINNALLRADQIEHAEGVSSVEDWLVPIVADAEAGFGGPLNAYELMKSMIT
+AGASGVHWEDQLASEKKCGHLGGKVLIPTGQHIRTLNAARLAADVADVPSVIIARTDAEA
+ATLITSDVDERDAEFITGERTAEGFYKVRNGVEPCIARAKAYAPHADLIWMETGTPDLEL
+ARKFAEAVKAEFPDQMLAYNCSPSFNWKKNLDDDTIAKFQRELGAMGYTFQFITLAGFHA
+LNHSMFDLAKGYNERQMSAYVELQEREFADEARGYTATKHQREVGTGYFDAVSTAINPDS
+STVALAGSTESGQFH
+>4_148
+MTTQPHHSTPASAEQLQHDWDNNPRWAGVERSFTAEDVVRLRGRIQEEHTLARRGAEKLW
+TQLKDENARGEFTNALGALTGNQAVQQVKAGLRAIYLSGWQVAADANLSGHTYPDQSLYP
+ANSVPQVVRRINNALLRADQIEHAEGVSSVEDWLVPIVADAEAGFGGPLNAYELMKSMIT
+AGASGVHWEDQLASEKKCGHLGGKVLIPTGQHIRTLNAARLAADVADVPSVIIARTDAEA
+ATLITSDVDERDAEFITGERTAEGFYKVRNGVEPCIARAKAYAPHADLIWMETGTPDLEL
+ARKFAEAVKAEFPDQMLAYNCSPSFNWKKNLDDDTIAKFQRELGAMGYTFQFITLAGFHA
+LNHSMFDLAKGYNERQMSAYVELQEREFADEARGYTATKHQREVGTGYFDAVSTAINPDS
+STVALAGSTESGQFH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000287.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000287.fa
new file mode 100644
index 0000000000000000000000000000000000000000..963ded79dafe5dc8f10d594c65aad24f9168ac92
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000287.fa
@@ -0,0 +1,35 @@
+>0_228
+MPIASPDKYAEMIDAAKNGAFAYPAINVTSSQTLNAAIRGFAEAGSDGIIQVSTGGAAYF
+SGASVKDMVTGSLAMAAFAREVAKNYSVNIALHTDHCPKDKLDAFVMPLLDASEAEVKAG
+RDPIFNSHMWDGSAETLEENLRIGKELLARTHANKQILEVEIGVVGGEEDGVAHEINDKL
+YTTVEDGIATIEALGLGEQGRYLTALTFGNVHGVYKPGNVKLRPQILEDIQKAVGEKFGK
+ERPFDLVFHGGSGSAAQEIADSVSYGVVKMNVDTDTQYAFSRPVAGHMFENYAGVLKVDG
+EVGDKKMYDPRVWGAKAEEAMAARVVQACQELNSAGTSIG
+>1_138
+MPIASPEKYAEMIDAAKNGAFAYPAINVTSSQTLNAAIRGFAEAGSDGIIQVSTGGAAYF
+SGSSVKDMVAGSLAFAAFAREVAKKHSVNIALHTDHCPQDKLEDFVLPLLDASEAEVKAG
+RDPIFNSHMWDGSAETLEENLRIGRELLARTHANKQILEVEIGVVGGEEDGVAHEINEKL
+YTTVADGIATVEALGLGENGRYLTALTFGNVHGVYKPGNVKLRPEILQEIQQAVGEKFGR
+ERPFDLVFHGGSGSAAQEIADSVEYGVVKMNVDTDTQYAFTRPVAGHMFENYDGVLKVDG
+EVGDKKQYDPRVWGAKAEEAMAARVVQACTELNSAGKSIG
+>2_163
+MPIASPDKYAEMIDAAKNGAFAYPAINVTSSQTLNAAVRGFAEAGSDGIIQVSTGGAAYF
+SGSSVKDMVAGSLAMAAFAREVAKKYSVNIALHTDHCPKDKLDGFVKPLLDASEAEVKAG
+RDPLFNSHMWDGSAETLEENLRIAQELLARTHANKQILEVEIGVVGGEEDGVANEINDKL
+YTTVEDGIATIEALGLGENGRYLTALTFGNVHGVYKPGGVKLRPQILQDIQQAVGEKFGR
+QRPFDLVFHGGSGSAAQEIADSVSYGVVKMNVDTDTQYAFSRPVAGHMFENYDGVLKVDG
+EVGNKKMYDPRVWGAKAEDGMAARVVQACQELNAAGKSIG
+>3_2103
+MPIASPEKYAEMIDAAKNGAFAYPAINVTSSQTLNAAIRGFAEAGSDGIIQVSTGGAAYF
+SGSSVKDMVAGSLAFAAFAREVAKKYSVNIALHTDHCPQDKLEGFVLPLLDASEAEVKAG
+RDPIFNSHMWDGSAETLEENLRIGRELLARTHANKQILEVEIGVVGGEEDGVAHEINEKL
+YTTVADGIATVEALGLGEHGRYLTALTFGNVHGVYKPGNVKLRPEILQEIQQAVGEKFGK
+ERPFDLVFHGGSGSAAQEIADSVEYGVVKMNVDTDTQYAFTRPVAGHMFENYDGVLKVDG
+EVGDKKQYDPRVWGAKAEEAMAARVVQACTELNSAGKSIG
+>4_146
+MPIASPEKYAEMIDAAKNGAFAFPAINVTSSQTLNAAIRGFAEAGSDGIVQVSTGGAAYF
+SGSSVKDMVAGSLAFAAFAREVAKKYSVNIALHTDHCPQDKLEGFVLPLLDASEAEVKAG
+RDPIFNSHMWDGSAETLEENLRIGRELLARTHANKQILEVEIGVVGGEEDGVAHEINEKL
+YTTVQDGIATVEALGLGEHGRYLTALTFGNVHGVYKPGNVKLRPEILQEIQQAVGEKFGK
+ERPFDLVFHGGSGSAAQEIADSVEYGVVKMNVDTDTQYAFTRPVAGHMFENYDGVLKVDG
+EVGDKKQYDPRVWGAKAEEAMAARVVQACTELNSAGKSIG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000289.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000289.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6c0650b1e2241d386f44e2d65c9229d19eec86a5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000289.fa
@@ -0,0 +1,23 @@
+>0_231
+MGPGTSENSPETREKREEREGREEREVGVGPWEGPWPEDPRYDPELLRDGDRRNVVDGYR
+YWTLEAIVADLDARRHPFHVAIENWQHDLNIGTVVRTANAFNAAGVHVIGRRRWNRRGAM
+VTDRYLHVRHHATVEEFTAWAAAEGLPVLGVDLFPESVPLESFELPRECVLVFGQEGPGL
+SEEVRAASAAVLSIAQYGSTRSINAGVAAGIAMHAWVRQHGGVPTSSS
+>1_135
+MAIENWQHDLNIGTVVRTANAFNAAGVHIIGRRRWNRRGAMVTDRYLHVRHHETVAAFTE
+WAAGEGLPVLGVDLFPESVPVETFDFPRACVLVFGQEGPGLSAEVRAASSAVLSIAQYGS
+TRSINAGVAAGIAMHAWIRQHAAVP
+>2_165
+MGSGEGVDAREVGREVGAPPWEGPWPEDPRYDPALLRDGDRRNVADRYRYWTVEAIVADL
+DRTRHPFHVAIENWQHDLNIGTVVRTANAFNAAGVHIIGRRRWNRRGAMVTDRYLHVHHH
+ETVEAFTAWAAGEGLPVLGVDLFPESVPVETFDFPRACVLVFGQEGPGLSEEVRAASEAV
+LSIAQYGSTRSINAGVAAGIAMHAWIRQHGGPAPV
+>3_2100
+MLDHYRYWSLEAIVADLDARRHPFHVAIENWQHDLNIGTVVRTANAFNAAGVHIIGRRRW
+NRRGAMVTDRYLHVRHHETVAAFTEWAAGEGLPVLGVDLFPESVPVETFDFPRACVLVFG
+QEGPGLSAEVRAASSAVLSIAQYGSTRSINAGVAAGIAMHAWIRQHAAVP
+>4_143
+MPREVGVGPWLGPWPEDPRYDPELLAHGDRRNVLDRYRYWRLEAIVADLDARRHPFHVAI
+ENWQHDLNIGTVVRTANAFNAAGVHIIGRRRWNRRGAMVTDRYLHVRHHETVAAFTEWAA
+GEGLPVLGVDLFPESVPVETFDFPRACVLVFGQEGPGLSAEVRAASSAVLSIAQYGSTRS
+INAGVAAGIAMHAWIRQHAAVP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000292.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000292.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9477911d109d5927d8936e46bf9a531d238a5382
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000292.fa
@@ -0,0 +1,25 @@
+>0_234
+MGGMTDAQTPTVPTPEQDRERLKELIQELAVVHGRVTLSSGKEADYYVDLRRVTLHHEAA
+PLIGRVMLRLLEENGVQFETMGGLTMGADPVATAMMHQAGAQGRALDAFVVRKAQKSYGM
+GRQVEGPGVDGRDVVVLEDTSTTGGSALTAVEGVRRAGGRVQAVAVIVDRATGAAERVAE
+EADVPYLYAFGKDELGLD
+>1_132
+MGGMTDAQTPTVPTPEQDRERLKQLIQDLAVVHGRVTLSSGKEADYYVDLRRVTLHHEAA
+PLIGRVMLRLLEENGIGCDAVGGLTMGADPVATAMMHQAGAAGRALDAFVVRKAQKSYGM
+GRQVEGPGVDGRRVVVLEDTSTTGGSALTAVEGVRNAGGDVQAVAVIVDRATGAAERVAE
+EAGVPYLYAFGKDELGLD
+>2_168
+MTAEHTSVAPTPEQDRERLRELIKELAVVHGRVTLSSGAEADYYVDLRRVTLHHEAAPLI
+GRVMLRLLEENGIEFETMGGLTMGADPVATAMMHQAGAQGRALDAFVVRKAQKSYGMGRQ
+VEGPGVEGRRVVVLEDTSTTGGSALTAVEGVRKAGGDVQAVAVIVDRATGAAERVAEEAG
+VPYLYAFGKDELDLD
+>3_2097
+MGGMTDAQTPTVPTPEQDRERLKQLIQELAVVHGRVTLSSGKEADYYVDLRRVTLHHEAA
+PLIGRVMLRLLEENGIEFDAVGGLTMGADPVATAMMHQAGTVGRALDAFVVRKAQKSYGM
+GRQVEGPGVDGRRVVVLEDTSTTGGSALTAVEGVRNAGGDVQAVAVIVDRATGAAERVAE
+EAGVPYLYAFGKDELGLD
+>4_140
+MGGMTDAQTPTVPTPEQDRERLKQLIQDLAVVHGRVTLSSGKEADYYVDLRRVTLHHEAA
+PLIGRVMLRLLEENGIGCDAVGGLTMGADPVATAMMHQAGAAGRALDAFVVRKAQKSYGM
+GRQVEGPGVDGRRVVVLEDTSTTGGSALTAVEGVRNAGGDVQAVAVIVDRATGAAERVAE
+EAGVPYLYAFGKDELGLD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000301.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000301.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9b3f2df1611cf8a24484d3e3827188fa7591d26d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000301.fa
@@ -0,0 +1,35 @@
+>0_246
+MSAQTQPAAPREDAPLGVLVGVDGSEQSVSAARWAQREAGLRGEPLTLVTAYSIPAYWGY
+GADAGGTVLDDSRLREGVQVLLDEVAAKLDADGVRPELRVEVGDAAGVLVDLSKAASLLV
+SGGRGRGGFIGRLLGSVASALPGHAHCPVAIIPAGVEASRAADGAAVVAGVDGSEQGRAA
+ALVAAEEARIRQAPLKLVCALPPVGGNAAWLGVTLDEAAREQELRERLDAGAAWIASEFP
+GLEVVTELVDGTPVDVMREQTATARLTVVGTRGLGGFTGALVGSTSRGVTDHAKGPVMVV
+PFRKDARLGTRTKFGPVADQD
+>1_121
+MSAQTQPAATRREDAPLGVLVGVDGSDQSVSAARWAQREAGLRGEPLTLVTAYSIPAYWG
+YGADASGAVLDDSRLREGVQALLEEVAGKLDADGVRPELRVEIGDAAGVLVELSAEASLL
+VSGARGRGGFMGRLLGSVAAALPGHAHCPVAIIPAGVEASRAGDRTAVVVGVDGSEQGRA
+AALEAAEEARLRQAPLKLVCAVPPLGANAAWLAVSLDEEARERELRERLEAGAAWISSEF
+PGLEVLTELVDGTPVDVLVDQTATARLTVVGTRGLGGFAGAIVGSTSRGVADHAKGPVLV
+VPFREDVRLGRRASFGPVQDQSGS
+>2_180
+MSAETTPSTLPAEAPLGVLVGVDGSDQSISAARWAQREAGLRNLPLTLATAYTVPAFWGY
+AADGAGLLTDDGRLHAGVEALLREVAGKLDPAGVAPELRVEVGDAAGVLIDLSAQAELLV
+SGSRGRGGFIGRLLGSVSSALPGHAHCPVAIIPAGVEASRADSGAPVVVGVDGSEQGRAA
+ALVAAEEAQARKAPLHLISALPPISPNAAWLAVSLDEEAREQELRERLEDGARWLASEFP
+GLEVTSELASGVPVDVMVEQTATARLTVLGTRGLGGFSGALMGSTSAGVANHAKGPVMVV
+PFREDVRLGRRAEFGAVVDQDDPRV
+>3_2086
+MSAQTQPAATRREDAPLGVLVGVDGSDQSVSAARWAQREAGLRGEPLTLVTAYSIPAYWG
+YGADAGGAVLDDSRLREGVQALLEEVAGKLDADGVRPELRVEIGDAAGVLVELSAEASLL
+VSGARGRGGFMGRLLGSVAAALPGHAHCPVAIIPAGVEASRAGDRTAVVVGVDGSEQGRA
+AALEAAEEARLRQAPLKLVCAVPPLGANAAWLAVSLDEEARERELRERLDAGAAWISSEF
+PGLEVLTELVDGTPVDVLVDQSATACLTVVGTRGLGGFAGAIVGSTSRGVADHAKGPVLV
+VPFREDVRLSRRASFGPVQDQPES
+>4_129
+MSAQTQPAATRREDAPLGVLVGVDGSDQSVSAARWAQREAGLRGEPLTLVTAYSIPAYWG
+YGADAGGAVLDDSRLREGVQALLEEVAGKLDADGVRPELRVEIGDAAGVLVELSAEASLL
+VSGARGRGGFMGRLLGSVAAALPGHAHCPVAIIPAGVEASRAGDRTAVVVGVDGSEQGRA
+AALEAAEEARLRQAPLKLVCAVPPLGANAAWLAVSLDEEARERELRERLDAGAAWISSEF
+PGLEVLTELVDGTPVDVLVDQSATACLTVVGTRGLGGFAGAIVGSTSRGVADHAKGPVLV
+VPFREDVRLGRRASFGPVQDQPES
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000307.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000307.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fe006d9a1289f6aea69bc55a92de033e900545c9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000307.fa
@@ -0,0 +1,30 @@
+>0_257
+MAKNSMIGRYTSGKVKDFALKSALDENGEPTEGFEKVVSKVLGIQRPLVLKHIQNVAAKN
+PELTAEQIAERLGQQYLNTVTGAGAAVGGTAIVPGVGTVAALGLSAAATVGFMEATALYA
+QSLAELHGITMEDPQRAETLVMALMLGDDAKELLREAAAKAGRPFDPNASLNALAGSAAG
+TGGGAGISAFVMDRLKRTFMKKMLVRQGAGFLGRAVPFGVGAVIGGVGNRAMGKAVMENA
+QELFGPLPTVIPGEIREGAARQAQEDDGEGGVFAAIRRALPGGDDKKDAAKA
+>1_111
+MAKNSTIGRYASGKVKDFGLKSALDENGEPTEGFEKALSTVLAVQRPLVLKNIQRMAAKH
+PGESPERLAERLGQQYLTTVTGAGAAVGGTAIVPGIGTVAALGLSGAAVAGFMEATALYA
+QSLAELHGITTQDPQRAQALVMGLMLGDDAKELLREAAAKAGRPYDPQSSLNALAGTASG
+TGISAFVVDRLKRTFMRKMLLRQGAGFVGRAVPFGVGAVIGGVGNRAMGKAVMENAAELF
+GPLPMVIPGEIREGVAQGRAGGESAGAKDDGGVLGAIRRALPGGKDEKDDRQKKGKPAA
+>2_190
+MAKNSIIGRYASGKAKDFAMKSAFDENGNPTEGFEKLVFTTLDIQRPLVLKNIQRLHESH
+PGETPEQLAERLADQYVTASTGAGAAVGGTAIVPGIGTVAALGLSAAATVAFLEATALYA
+QSLAELHGLTTKDPARSKALVMAVMLGDDTKELLKDISRKSGVKNTGTPDSAAGLAAMMN
+GGAAGQAAGGAGLGAVAIEQLKKQFVKKVLVRQGAGFLGRAVPFGVGAVIGGVGNRAMAK
+AVVKNSRDLFGPLPAQIPGEIVAASAKGQDVGQSAEDGKGGLVSGLIKALPLGKKDEKKA
+>3_2075
+MAKNSTIGRYASGKVKDFGLKSALDENGEPTEGFEKALSTVLAVQRPLVLKNIQRMAAKH
+PGESPERLAERLGQQYLTTVTGAGAAVGGTAIVPGIGTVAALGLSGAAVAGFMEATALYA
+QSLAELHGITTQDPQRAQALVMGLMLGDDAKELLREAAAKAGRPYDPQSSLNALAGTASG
+TGISAFVVDRLKRTFMRKMLLRQGAGFVGRAVPFGVGAVIGGVGNRAMGKAVMENAAELF
+GPLPMVIPGEIREGAAQGRAAGESEGTKDYGGVFGAIRRALPGGKDEKDKPAA
+>4_116
+MAKNSTIGRYASGKVKDFGLKSALDENGEPTEGFEKALSTVLAVQRPLVLKNIQRMAAKH
+PGESPERLAERLGQQYLTTVTGAGAAVGGTAIVPGIGTVAALGLSGAAVAGFMEATALYA
+QSLAELHGITTQDPQRAQALVMGLMLGDDAKELLREAAAKAGRPYDPQSSLNALAGTASG
+TGISAFVVDRLKRTFMRKMRLRQGAGFVGRAVPFGVGAVIGGVGNRAMGKAVMENAAELF
+GPLPMVIPGEIREGAAQGRADGTKDDGGVFGAIRRALPGGKDEKDDRQKKGKPAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000309.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000309.fa
new file mode 100644
index 0000000000000000000000000000000000000000..18f38cd9173605f64f05365cd861e2418652783e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000309.fa
@@ -0,0 +1,25 @@
+>0_262
+MARHRQTTGRGASSSASGLVRPHRPRLSEPDELAHFAGGEDPQEVAAAASRLAHALVAGG
+RAEEDPEVVERLVGLVRELGVETLAELWADAPPVSLAGALWRLYALQEATARDGERWAAW
+YRAGHAAHAARAVAGAVEPPGPDELRRLTDTILTGAYRSEIDVAFERAGAYGRVVALGQV
+EHAEAAEAADPALAAGLTRRAARLVSTSEALEEAARAFRNGSLD
+>1_109
+MARHRLPAGRGASSSASGVLRPHRPRLSEPQELTHFAGGEDPQEVAAAASRLAHALVAGG
+RAEEDPAIVERLVGLVRELGVETLAELWADAPPVSLAGALWRLYALQEATTRDGERWAAW
+YRAGHAAYASRVVAGAVEPPGPAELRRLTDTILTGAYRSEIDVAFERAAAYARVVALGQV
+EHAEGSEAAAPDRAAALTRRAARLVSTADALEAAGRAFRDGSLD
+>2_204
+MAHHRAPAGRGASSTASGLVRPHRPRLTDPGLIADLADGEDPQEIAAAASRLAHALVAGG
+RAEEDPDVVARLVGLVREVGVETLAGLWADAPAVSLAGALWRLYALQEATARDGERWAAW
+YRAGHAAHAARAVAGAVEPPGPEELRRLTDTILTGAYRSELDVALERAGAYARVVALGQA
+EHAAAAEHADPAHAARLTLRAARMISTAEALEAAARSWRDGSLD
+>3_2073
+MARHRLPAGRGASSSASGVLRPHRPRLSEPQELTHFAGGEDPQEVAAAASRLAHALVAGG
+RAEEDPAIVERLVGLVRELGVETLAELWADAPPVSLAGALWRLYALQEATTRDGERWAAW
+YRAGHAAYASRVVAGAVEPPGPAELRRLTDTILTGAYRSEIDVAFERAAAYARVVALGQV
+EHAEGSEAAAPDRAAALTRRAARLVSTADALEAAGRAFRDGSLD
+>4_104
+MARHRLPAGRGASSSASGVLRPHRPRLSEPQELTHFAGGEDPQEVAAAASRLAHALVAGG
+RAEEDPAIVERLVGLVRELGVETLAELWADAPPVSLAGALWRLYALQEATTRDGERWAAW
+YRAGHAAYASRVVAGAVEPPGPAELRRLTDTILTGAYRSEIDVAFERAAAYARVVALGQV
+EHAEGSEAAAPDRAAALTRRAARLVSTADALEAAGRAFRDGSLD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000310.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000310.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d36ab5c6443778de9717e8cd947132a9832e5e3f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000310.fa
@@ -0,0 +1,25 @@
+>0_263
+MSPRMPWPVTRDTPALRHIVDLAEALRRSVHLVAQVAGARGPEADRTARELEDLDAASTA
+SLMSFLTALRSAYVTPLPRQDLYRLAGGVHAATQRVVSAGVLIQRADLEHLPAHALDVLE
+TVGRQAELLGRSTTELRDLDALEATWMQLLRASRRTERIMVQWLADLGMDLLQRDFNRQR
+EVAWALQSALEALGRVNTDLGMVLVRES
+>1_108
+MSPRMPWLVTRDTPALRHMADLAEALHRSVHLVAQVAGTRGPEADRAARELEELDSSSSA
+TLMAFLTALRSAYVTPLPRQDLYRLASGVHATTRRVVSAGVLIQRADLEELPTHALDVLE
+TVGRQAELLARGAAEMRDLDALEATWMQLLRASRRTERIMVEWLADLGMDLLQRDYNRQR
+EVAWALHAALEALSRVNMDLGMVLVRES
+>2_205
+MTPRPAWLVTRDSPALGHLTDLCDTLGRAVRAVAQAVAADGSERDRVERDLSALDAAATA
+ALMAFLTALRSAYVTPVPRPDLYRLADGVKTAAHRVVGAGVLVHRADLDALPRNAVELLE
+TLGRQAELLAHGTRQLRDLDALEDTWMQLERGIRRMERLMVDWLAALGTDLLQRDYNRQR
+EIASALRDAVLALDRVNTDLGVVLVRES
+>3_2072
+MSPRMPWLVTRDTPALRHMADLAEALHRSVHLVAQVAGTRGPEADRAARELEELDSSSSA
+TLMAFLTALRSAYVTPLPRQDLYRLASGVHATTRRVVSAGVLIQRADLEELPTHALDVLE
+TVGRQAELLARGAAEMRDLDALEATWMQLLRASRRTERIMVEWLADLGMDLLQRDYNRQR
+EVAWALHAALEALSRVNMDLGMVLVRES
+>4_103
+MSPRMPWLVTRDTPALRHMADLAEALHRSVHLVAQVAGTRGPEADRAARELEELDSSSSA
+TLMAFLTALRSAYVTPLPRQDLYRLASGVHATTRRVVSAGVLIQRADLEELPTHALDVLE
+TVGRQAELLARGAAEMRDLDALEATWMQLLRASRRTERIMVEWLADLGMDLLQRDYNRQR
+EVAWALHAALEALSRVNMDLGMVLVRES
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000311.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000311.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6c8dd84a06c310699f5b8d7f4cbcb87636af6232
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000311.fa
@@ -0,0 +1,35 @@
+>0_264
+MTPGLAVVALLLCALAAMMGFRDAPNAVALPVRFRALTPRLALVMTALINAVGALLGIGL
+ITLSVHYFTSPAVRGDVGPLAVGVTAVVAVLWGLLLWWRRLPGSTTHAVLSALAGAHLAV
+QLSLHDDLAGSILESVRVEVVLSLLLSPVIAWGLARLLTGPVVQVATTGTTVNVQRRARI
+ALAVSAGAMAMGHGLQAGQRVGVLWAAVLVGSGAALSPDALTAEFVVGSVLFALAIALGT
+LGGAWRIAWTLTERLVRLDPLRASVAAVVPAGLLFVGSLVLHLPLSSTHTATAAIVGAGQ
+TQTYASVRWPTVLRVGGWWLLTPVVCAALGLLGTLALLPLA
+>1_107
+MTAGLAVVLVLLCAVGALMGFRDAPNAAALPVRYRALTPRGALLLTGAVNTVGALLGIGL
+ITLSVHYFTSPAVRSEIGPLAVGVSCAVTLVWGLLLWWRRLPGSSTHALISALAGSHLAV
+RLSLHIDVAHTIFDLVRAEVLLSLLLSPLIAWALARLLTAPAMRLATRGTTVNVQHRARV
+ALGISASAMAMGHGLQAGQRMGVLWAAVLVGSGSVLAPDALTAEFVGGAFLFALAVGLGT
+LGGAWRIAWTLTERLVRLDPLRASVAAVIPAGLLFVGSLVFHLPLSSTHTATAAIVGAGQ
+TQTYASVRWPTVLRVVGWWLLTPVACALLGLLGTLALLPLA
+>2_206
+MTAPLLVPVLVLLLAVGGLMGFRDAPNAVALAVRFRALTPRVALILSALLNAVGVLLGAL
+MLTLGLPLMVAGGTARPEVLALVGVAAAVTLGWGVLAWRFRAPTSTTHALLASLAAAHVA
+SVSALGSGLDPAFENGARWEVAASLLLSPVLAWGLARLTARPVLRLATTGTTVNVQHRAR
+IALAVSTGLIALGHGVQAALRLLPLAVLVATAAVGTGLPPGTELSAAFVAAAAVGIGTLG
+GAWGIAWTLTERLVILDPLRAAVAAVVPAVLLFAGTMLLHLPLSSTHTGVAGIVGAGQTQ
+SYASVRWGAVARVAVWWVATPLVCGSLAFAAGAVLLPLLG
+>3_2071
+MTAGLAVVLVLLCAVGALMGFRDAPNAAALPVRYRALTPRGALLLTGAVNTVGALLGIGL
+ITLSVHYFTSPAVRSEIGPLAVGVSCAVTLVWGLLLWWRRLPGSSTHALISALAGSHLAV
+RLRLHIDVAHTIFDLVRAEVLLSLLLSPLIAWALARLLTAPAMRLATRGTTVNVQHRARV
+ALGISASAMAMGHGLQAGQRMGVLWAAVLVGSGSVLAPDALTAEFVGGAFLFALAVGLGT
+LGGAWRIAWTLTERLVRLDPLRASVAAVIPAGLLFVGSLVFHLPLSSTHTATAAIVGAGQ
+TQTYASVRWPTVLRVVGWWLLTPVACALLGLLGTLALLPLA
+>4_102
+MTAGLAVVLVLLCAVGALMGFRDAPNAAALPVRYRALTPRGALLLTGAVNTVGALLGIGL
+ITLSVHYFTSPAVRSEIGPLAVGVSCAVTLVWGLLLWWRRLPGSSTHALISALAGSHLAV
+RLSLHIDVAHTIFDLVRAEVLLSLLLSPLIAWALARLLTAPATRLATRGTTVNVQHRARV
+ALGISASAMAMGHGLQAGQRMGVLWAAVLVGSGSVLAPDALTAEFVGGAFLFALAVGLGT
+LGGAWRIAWTLTERLVRLDPLRASVAAVIPAGLLFVGSLVFHLPLSSTHTATAAIVGAGQ
+TQTYASVRWPTVLRVVGWWLLTPVACALLGLLGTLALLPLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000320.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000320.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8beb10a96c9ef2b7479d9336b14a5fb89a27735e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000320.fa
@@ -0,0 +1,12 @@
+>0_274
+MGIGDLNNLANQHSDKINEAVDGAQEQHGDKLGEHADTVNKGVDGAQEKFLSGEKNEGEQ
+QA
+>1_97
+MGIGDLNNLANQHSDKIDEAVDNAQEQHGDKLGEHGDTVNKGVDGAQEKFLSGDEGEQQA
+>2_221
+MVGFDDVKNLANENSDKINEQVDAAQAQHSDKLGQHADLADKGIDGAQDKFLNGQSAENE
+GEQQA
+>3_2061
+MGIGDLNNLANQHSDKIDEAVDNAQEQHGDKLGEHADTVNKGVDGAQEKFLSGDEGEQQA
+>4_92
+MGIGDLNNLANQHSDKIDEAVDNAQEQHGDKLGEHGDTVDKGVDGAQEKFLSGDEGEQQA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000325.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000325.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c9c21f083bd6bbca5c4682619a5deeff4b4595b1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000325.fa
@@ -0,0 +1,61 @@
+>0_281
+MIDHRQSLTAVNHSDDPAEGPHEPHLPAVAGTAPAGAPSLERAAADAARHRAVLQALTGL
+LLGMFVSMIANTVVSTSMPVIISDIGGNQNDYTWVITAALLATAVSTPVWGKLADLMDRK
+MLFQVALVIFVGASAAAGFTNDPTFLIVCRVVQGLGGGGLAALSQVIMADIISPRERGRY
+MGLFGAVMAVATVGGPLAGGVITDLWGWRWNFFVAVPFALVALVMVQRTLHLPAREPRKV
+SIDYLGIVLLGVATSLLLIWVTTAGQQFPWASWTTAWMVGGAVLAAALFVVVELKVTEPL
+IPLTLFRNRTFTLATIASIATGLAMFGAGVYLAQYMQLARGATPTQAGLMTIPMIAGLLI
+TSTVIGRVITRTGVWKRWLIVGAVLLTAGMALLATLHYDTPFVLVSLHMLLLGAGVGMTM
+QNLVLVVQNTTDPRQMGVASSGVTFFRSLGGSVGVAAMGAVVANVVPSRFEARGADLAAA
+LQSLGADGPVWAQRLQSGTLPRVAEMPEPLRVVVEDVYATGISQAFLVGVPLAVVAVVAI
+VFLPNIPLGRMTTSERLDASRADLATVTAPAAMQKVPATGEIPVVAPAAGGAGGTDDACT
+AEDADGTEGVPAAQGPTTAPAEPTAERAERPAVQPAAESVPARVVAPAAAAPSTAAASGR
+SGGARPGARAAAAVALLTAIAVLMRQARRG
+>1_91
+MTPTSPAPEAVAPAGAPSLERAAADAARHRSVLQALTGLLLGMFVSMIANTVVSTSMPVI
+IHDIGGDQTAYTWVITSALLATAIATPIWGKLADLVNRKVLFQVALAIFVAASAAAGFTH
+DPTFLIVCRTVQGLGGGGLVALSQVIMADIISPRERGRYMGLFGAVMAVATVGGPLAGGV
+ITDLWGWRWNFFVAVPFAVVALVMVQRTLHLPHRERQKVSIDYLGIVFLTAATALLLIWV
+TSAGRDFDWASTTSAWMLGGAAVATVLFVVTELRVAEPLIPLTLFRDRTFTLATIASIAT
+GLAMFGSSVYLAQYMQLARGATPTQAGLMTIPMILGLLVSSTVIGGLITRTGVWKRWLVI
+GAVLLIAGTALLGTLHYDTSFWLVSLYMFLLGAGVGMTMQNLVLVVQNTTDPRQMGVASS
+GVTFFRTLGGSIGVAVMGAVVSNVVPDRIEERRADLAAALRSLGPDAAEWSESLQSSTLP
+RVAEMPDSLRVIFEDVYAQGIALAFLVAVPLAIVALIAILFLPNLPLGRMTTSERLHATR
+ADLATHATAEAMQTLPATGPIPVVTAAQGQHPAEDPEESRSVSAERPATAVADRPVVPAA
+LAVAGTALLAAVVTALVRARRG
+>2_227
+MSTTTAPPATAGPAAVGNSPAVPSLERAADDAARHRTVLRALTGLLLGMFVSMIANTVVS
+TSMPVIISDIGGDQTAYTWVITAALLATAIATPIWGKLADLVDRKVLFQVALVLFVAASA
+AAGFTTDPTFLIVCRVIQGLGGGGLAALSQVIMADIISPRERGRYAGLFGAVMAVATVGG
+PLAGGIITDLWGWRWNFFVSLPFALVALVMVQRTLHLPARESRKVSIDYLGIVLLSTATA
+LLLIWVTNAGHQFDWASATTAWMLGGAALAAVLFVVVELTVAEPLIPLTLFRDRTFTLGT
+IASIATGLAMFGASVYLSQYMQLARGATPTQAGLMTIPMIVGLLVSSTVIGGVITRTGVW
+KRWLVIGAVLLIAGAAMLGTLHYDTSFWLVSLYMFLLGAGVGMTMQNLVLVVQNTTDPRQ
+MGVASSGVTFFRSLGGTIGVAVMGAVVANVVPDQVEQRRTDIGAALASLGPAGAEWAQRL
+QSGSLPRVAEMPDALRVIFEDVYATGISQAFLVGVPLAVVALAAILFLPNIPLGHMTTTE
+RIDAERADLATVSVPQAMQTLPATGSTPVVAQAQVQEAAPASTTTTPAPAARALRVPAGL
+RERRIAPAGTGRSTAWRATASALAAGAAAAAFVPLLRRSRRG
+>3_2055
+MTPTSPAPEAVAPAGAPSLERAAADAARHRSVLQALTGLLLGMFVSMIANTVVSTSMPVI
+IHDIGGDQTAYTWVITSALLATAIATPIWGKLADLVNRKVLFQVALAIFVAASAAAGFTH
+DPTFLIVCRTVQGLGGGGLVALSQVIMADIISPRERGRYMGLFGAVMAVATVGGPLAGGV
+ITDLWGWRWNFFVAVPFAVVALVMVQRTLHLPHRERQKVSIDYLGIVFLTAATALLLIWV
+TSAGRDFDWASTTTAWMLGGAAVATVLFVVTELRVAEPLIPLTLFRDRTFTLATIASIAT
+GLAMFGSSVYLAQYMQLARGATPTQAGLMTIPMILGLLVSSTVIGGLITRTGVWKRWLVI
+GAVLLIAGTALLGTLHYDTSFWLVSLYMFLLGAGVGMTMQNLVLVVQNTTDPRQMGVASS
+GVTFFRTLGGSIGVAVMGAVVSNVVPDRIEERRADLAAALRSLGPDAAEWSESLQSSTLP
+RVAEMPDGLRSIFEDVYATGISHAFLVGVPLAIVALIAILFLPNIPLGRMTTSERLHATR
+ADLATHATAEAMQTLPATGPIPVVTAAQGQHPAEDPEESRSVSAERPATAVADRPVVPAA
+LAVAGTALLAAVVTALVRARRG
+>4_86
+MTPTSPAPEAVAPAGAPSLERAAADAARHRSVLQALTGLLLGMFVSMIANTVVSTSMPVI
+IHDIGGDQTAYTWVITSALLATAIATPIWGKLADLVNRKVLFQVALAIFVAASAAAGFTH
+DPTFLIVCRTVQGLGGGGLVALSQVIMADIISPRERGRYMGLFGAVMAVATVGGPLAGGV
+ITDLWGWRWNFFVAVPFAVVALVMVQRTLHLPHRERQKVSIDYLGIVFLTAATALLLIWV
+TSAGRDFDWASTTTAWMLGGAAVATVLFVVTELRVAEPLIPLTLFRDRTFTLATIASIAT
+GLAMFGSSVYLAQYMQLARGATPTQAGLMTIPMILGLLVSSTVIGGLITRTGVWKRWLVI
+GAVLLIAGTALLGTLHYDTSFWLVSLYMFLLGAGVGMTMQNLVLVVQNTTDPRQMGVASS
+GVTFFRTLGGSIGVAVMGAVVSNVVPDRIEERRADLAAALRSLGPDAAEWSESLQSSTLP
+RVAEMPDGLRSIFEDVYATGISHAFLVGVPLAIVALIAILFLPNIPLGRMTTSERLHATR
+ADLATHATAEAMQTLPATGPIPVVTAAQGQHPAEDPEESRAVAAERPATASPVAGRPVAP
+AALAVAGTALLAAVVTALVRARRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000329.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000329.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f99e41647016720552bbb5122814478af37e8c79
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000329.fa
@@ -0,0 +1,25 @@
+>0_285
+MTPERLAAAFDGPSPALAATLLGCRLTVVAPDGAVTVRLTETEAYGDAGADPGAHSFRGR
+TERNAALFGPPRRTYVYLNYGIHRCLNLVGHPEGEAGGVLLRAAEVLAGGDLAVARRGRD
+TGLKLLSGPGNLGQGLGITLEMGHAPVEIVAAPPEVADDGGTPARLAAPARFLLAPPASR
+DPAEPPIEVVTGPRVGVSGEGGSVRFPWRFNVAGHRSVSAFRRGRNVPD
+>1_87
+MTPERLAAAFDGPSPALAATLLGCRLTVVAPDGAVTVRLTETEAYGNAGADPGAHSFRGR
+TERNAALFGPPRRTYVYLNYGIHRCLNLVGHPEGEAGGVLLRAAEVLAGGDLAVARRGRD
+TGPKLLSGPGNLGQGLGITLEMGHAPVEIVAAPPEVADDGGTSARLAAPAAPARFLLAPP
+APRDPAEPPIEVVTGPRVGVSGEGGSVRFPWRFSVAGHRSVSAFRRGRNVPD
+>2_231
+MTPERLAAAFDGPTPALAATLLGCRLTVVAPDGAVTVRLTETEAYGNAGADPGAHSFRGR
+TERNAALFGPPRRTYVYLNYGIHRCLNLVGHPEGEAGGVLLRAAEVLAGGDLAVARRGRD
+TGLKLLSGPGNLGQGLGITLQMGHVPVEIVAAPPEVADDGGTPARLAAPARFLLAPPASR
+DPAEPPIEVVTGPRVGVSGEGGSVRFPWRFSVAGHRSVSAFRRGRNVPD
+>3_2051
+MTPERLAAAFDGPSPALAATLLGCRLTVVAPDGAVTVRLTETEAYGNAGADPGAHSFRGR
+TERNAALFGPPRRTYVYLNYGIHRCLNLVGHPEGEAGGVLLRAAEVLAGGDLAVARRGRD
+TGPKLLSGPGNLGQGLGITLEMGHAPVEIVAAPPEVADDGGTPARLAAPAAPARFLLAPP
+APRDPAAPPIEVVTGPRVGVSGEGGSVRFPWRFSVAGHRSVSAFRRGRNVPD
+>4_82
+MTPERLAAAFDGPSPALAATLLGCRLTVVAPDGAVTVRLTETEAYGNAGADPGAHSFRGR
+TERNAALFGPPRRTYVYLNYGIHRCLNLVGHPEGEAGGVLLRAAEVLAGGDLAVARRGRD
+TGPKLLSGPGNLGQGLGITLEMGHAPVEIVAAPPEVADDGGTSARLAAPAAPARFLLAPP
+APRDPAEPPIEVVTGPRVGVSGEGGSVRFPWRFSVAGHRSVSAFRRGRNVPD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000333.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000333.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ce28b40de0c7667be9870cf79e1f1fd80b65dda9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000333.fa
@@ -0,0 +1,30 @@
+>0_289
+MTTNTPKNAHGSSAEGRDAKDQAKDKAQQAAGEAQGQAKAVANDAKDKVQDLAATAKHEA
+GQVKDEAADQVQSLVGSAQEEVGAQVQTQQERLAGQVRSYTDDLHRVVSGEQPQTDLVRQ
+GVASVADRAEALTQRLETASPQDLLQDVRGFAARRPGTFLALALGAGLVAGRLTRGIRDA
+AQPDAAAPTAPRRRDTRPEAVHADVTPHHLDSQAPAYSSDSLSQADGRVASGAGPRRAAG
+VGDTPYGVEAPEQHGLTAERPFDRSQPGGRA
+>1_83
+MTTNTPKNAHGSSAEGRDAKDQAKDKAQQAAGEAQGQAKAVAQDAKDKAQDLAATAKHEA
+GQVKDEAADQVQSLVGSAQEQVGAQVQTQQERFAGQVRSYTDDLHRVVSGEQPQTDLVRQ
+GVASVADRAEALTQRLETASPQDLLQDVRGFAARRPGTFLALALGAGLVAGRLTRGIRDA
+VQPDSAASTSPRRHTTRPDAVHADVTPHHLDSQAPAYSSDSLSQADGRVADGAGPRRAAG
+VGDTPYGTQAPVQQGLTAERPFDQTRPGGDA
+>2_235
+MAKNHSARAADPQQSETRQKAEAAAGAAQDQAAGVAQDAKAHAQDLAQSAQQEAVAVKDE
+AVQHAKSLAGSLQDQAAQQASTQQGRLAEQSRGITDDLHRLLSGEQPQGDAVRQAVAAVA
+DRAETLTQRLETAQPMDLVDDVRRFAARRPGTFLAIALGAGVLAGRMTRGVRDASQDGPA
+SLSSAPRTPQHRRELEPQGVQADVTPHHLDSQIPAHTGDDAPRPVSDTAAGLPYGTEPLP
+TIDPLTGEPVAEDPYDQTRDGGRA
+>3_2047
+MTTNTPKNAHGSSAEGRDAKDQAKGKAQQAAGEAQGQAKAVAHDAKDKAQDLAATAKHEA
+GQVKDEAADQVQSLVGSAQEQVGAQVQTQQERLAGQVRSYTDDLHRVVSGEQPQTDLVRQ
+GVASVADRAEALTQRLETASPQDLLQDVRGFAARRPGTFLALALGAGLVAGRLTRGIRDA
+AQPDSTASTSPRRHETRPDAVHADVTPHHLDSQAPAYSSDSLSQADGRVADGAGPRRAAG
+VGDVPYGTQAPVQQGLTAERPFDQTRPGGDA
+>4_78
+MTTNTPKNAHGSSAEGRDAKDQAKGKAQQAAGEAQGQAKAVAHDAKDKAQDLAATAKHEA
+GQVKDEAADQVQSLVGSAQEQVGAQVQTQQERLAGQVRSYTDDLHRVVSGEQPQTDLVRQ
+GVASVADRAEALTQRLETASPQDLLQDVRGFAARRPGTFLALALGAGLVAGRLTRGIRDA
+AQPDSTASTAPRRHETRPDAVHADVTPHHLDSQAPAYSSDSLSQADGRVADGAGPRRAAG
+VGDVPYGTQAPVQQGLTAERPFDQTRPGGDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000340.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000340.fa
new file mode 100644
index 0000000000000000000000000000000000000000..73189ff5cfc8134caccdec1db09a531010d2e498
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000340.fa
@@ -0,0 +1,25 @@
+>0_300
+MSGVDWRHPAEDPAPTPALGARPAEPVAAVLALGANLREPAQTLDAAVAALSALPHVTDV
+QASPRAVTAPVGGPPGQPDYLNQVLTLRTTLSAWELLAVAHRLEQEHHRRREVRWGARTL
+DVDVIAYGDLVSDHPDLTLPHPRAAERGFVLLPWLWLDPDAVLAGRPVAELAALAADAPG
+VRRAEPERHRLLAGRDDVVPVRPRAVRAPGRDAIDGSGP
+>1_74
+MSTVDWSHLAEGPAPVPALGARPDAPVAAVLALGANLREPAQTLDAAVAALSALPHITDV
+RASPRAVTAPVGGPPGQPDYLNQVVTLRTDLAPWELLAVAHRLEQDHHRRREVRWGARTL
+DVDVIAYGDVRSDHPDLTLPHPRAAERAFVLLPWLWLDADATLAGTPVADLAAVAADAPG
+VRRQEPERHRLLAGTDDVVPLRPACPDALGREDT
+>2_242
+MSRPEAAHPAEGPAPTPELAARPSSPVTAVLALGANLGDPSETLDASVAVLTVTPGIEAV
+AASPRALTAPVGGPPGQPDYLNQVVRIRTALSPWELLGVAHRLEQDHHRRRTVRWGARTL
+DVDLIVYGDLTSDHPDLVLPHPRAAERGFVLLPWAWLDPEAELAGESVAELGARAADAPH
+VRREPARTAHLDGPRPDVLRPDSTPGLPSAPLPDGAAIARPWSDPT
+>3_2038
+MSTVDWSHPAEGPAPIPELGARPDAPVAAVLALGANLREPAQTLDAAVAALSALPHITDV
+RASPRAVTTPVGGPPGQPDYLNQVVTLRTDLAPWELLAVAHRLEQDHHRRREVRWGARTL
+DVDVIAYGDVRSDHPDLTLPHPRAAERAFVLLPWLWLDADATLAGTPVADLAAVAADAPG
+VRRQEPERHRLLAGTDDVAPLRPARPDALGREAT
+>4_68
+MSTVDWSHPAEGPAPIPELGARPDAPVAAVLALGANLREPAQTLDAAVAALSALPHITDV
+RASPRAVTTPVGGPPGQPDYLNQVVTLRTDLAPWELLAVAHRLEQDHHRRREVRWGARTL
+DVDVIAYGDVRSDHPDLTLPHPRAAERAFVLLPWLWLDADATLAGTPVADLAAVAADAPG
+VRRQEPERHRLLAGTDDVAPLRPARPDALGREAT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000341.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000341.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7232c009eb604878734e4ec8502023a0f5e1b76e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000341.fa
@@ -0,0 +1,20 @@
+>0_301
+MSARDRIRLTGLSAVGHHGVFDHERRDGQPFVTDVVLHLNAGPAAAGDDLARTANYAEVA
+DTVVRLVTGEPVDLIETLAERIARAVLAEQPVVEAVEVTVHKPQAPIPHDFADAAVTVHR
+TRRDAS
+>1_73
+MSARDRIRLAGLSAVGHHGVFDHERRDGQPFVTDVVLHLDAGPAAAGDDLARTANYAEVA
+DTVVRLVTGEPVDLIETLADRIARAVLAEQPVVTAVEVTVHKPQAPIPHDFADAAVTVHR
+TREDLA
+>2_243
+MSDVIRLTGLTATGRHGVFEHERRDGQPFTTDVALTLDAGPAAARDDLARTANYAEVAET
+VVRLVTGEPFDLIETLAVRIAEAVLAEQPVVTAVEVTVHKPQAPIPHDFTDVSVTVARRR
+GA
+>3_2037
+MSARDRIRLAGLSAVGHHGVFDHERRDGQPFVTDVVLHLDAGPAAADDDLARTANYAEVA
+DTVVRLVTGEPVDLIETLADRIARAVLAEQPVVAAVEVTVHKPQAPIPHDFADAAVTVHR
+TREDLA
+>4_67
+MSARDRIRLAGLSAVGHHGVFDHERRDGQPFVTDVVLHLDAGPAAAGDDLARTANYAEVA
+DTVVRLVTGEPVDLIETLADRIARTVLAEQPVVAAVEVTVHKPQAPIPHDFADAAVTVHR
+TREDLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000349.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000349.fa
new file mode 100644
index 0000000000000000000000000000000000000000..731c3360166408f1969da20d1f2216aee94f0df8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000349.fa
@@ -0,0 +1,30 @@
+>0_314
+MEKKLVCLDVDGTIVDHDGHLHEPVREAVKAVVAAGHHVVIATGRSRGATLPVAQSLGIE
+AGYMVCSNGGVTLRLDPALEDGYEVTDCRTFDPRSVLSQLRSRLPGAKYAVEVPDGSFLS
+TERFQDMSFGVAAEGTTFEELKNTTAVRLVVFSTDSSAEEFGRAVEGIGLSGVTYSVGWT
+AWLDVAAAGVTKASGLEALRTVLHVAPEHTVAVGDGRNDLEMLAWAGRGVAMGQAVREVK
+EAADEVTASVDDHGLADVLWSLVPEADRPEGVRVQEPAAA
+>1_62
+MTKKLVCLDVDGTIVDHDGHLHEPVRAAVRAVLDAGHHVVIATGRSRGATLPVARSLGIG
+AGFMVCSNGGVTLRLDPELEEGYEVTDLRTFDPRSVLTQLRHRLPSAKYALELPDGTFRS
+TERFQDMSFGVAAEGVTFEELMDTTAVRLVVFSTDSSAEEFGRAVEGIGLSGVTYSVGWT
+AWLDVAAAGVTKASGLEALRTVLKVAPEDTVAVGDGRNDIEMLRWAGRGVAMGQAVEEVV
+AAADEVTGHVDEHGLATVLRSLLEEPAAA
+>2_254
+MTKKLVCLDVDGTIVDHDGRLHEPVREAVRAVIEAGHHVVIATGRSRGATLPVAESLGID
+SGYVICSNGGATLRLDRALEDGYEVTDLRTFDPQSVLAQLRDRLPSAKYALELPDGSFLS
+TERFQDMSFGVAAEGVGFEELMATTAVRLVVFSTDSSAEEFGRAVEGIGLSGVTYSVGWT
+AWLDVAAAGVTKASALEALRTVLHVDVADTVAVGDGRNDVEMLRWAGRGVAMGQAPDEVK
+EAADEVTGGVDEHGLATVLRTLL
+>3_2026
+MTKKLVCLDVDGTIVDHDGHLHEPVRAAVRAVLDAGHHVVIATGRSRGATLPVARSLGID
+AGFMVCSNGGVTLRLDPELEEGYEVTDLRTFDPRSVLTQLRHRLPSAKYALELPDGTFRS
+TERFQDMSFGVAAEGVTFEELMDTTAVRLVVFSTDSSAEEFGRAVEGLGLSGVTYSVGWT
+AWLDVAAAGVTKASGLEALRTVLKVAPEDTVAVGDGRNDIEMLRWAGRGVAMGQAVEEVV
+AAADEVTGHVDEHGLATVLRSLLEEPTAA
+>4_56
+MTKKLVCLDVDGTIVDHDGHLHEPVRAAVRAVLDAGHHVVIATGRSRAATLPVARSLGIG
+AGFMVCSNGGVTLRLDPELEEGYEITDLRTFDPRSVLTQLRHRLPSAKYALELPDGTFRS
+TERFQDMSFGVAAEGVTFEELMDTTAVRLVVFSTDSSAEEFGRAVEGIGLSGVTYSVGWT
+AWLDVAAAGVTKASGLEALRTVLKMAPEDTVAVGDGRNDIEMLRWAGRGVAMGQAVEEVV
+AAADEVTGHVDEHGLATVLRSLLEEPAAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000353.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000353.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9fe5612f38fddfef2afc141bfc02e8587696da76
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000353.fa
@@ -0,0 +1,49 @@
+>0_320
+MQLRDALAAGELSAREVTQAALDAAERHAGLGAFTLLDPEGALARADELDDDGARASLHG
+LPLAYKDLTDVRGLPTRHGSALLAGAPAAEEDAPLVRRLVGAGTVTLGKTTVPEFGLDSY
+SENLVSAPARNPLDPARTPGGSSGGSAAAVAAGILPFAPGSDGGGSIRIPAAACGLVGFK
+PGRGELPVDEPADTVRNLTVSGPLAHTVEDAALLYDELLTPEGLPGRVLADLRRTVETAR
+AGGAVEGRRIGVTTASPFAPDVPITLARPAVTALTKAAAALSAGGHAVQDLHPAYGEEYH
+RDFRTVWTSGLLRAPLPEDAEERVGAIAAHFLRTARSAGRQEIDDAVRRLEAWARGVRGQ
+FAAVDVVMTPVLAAAPPPVGHFLAMEPEDNYAAQCAFTPYTSMVNVLGLPAASVPVLRDE
+RGLSWSVQLIGRPGTSGALLALAAHLELLLAG
+>1_56
+MTLPTPVRLGRMQTSDAAPAADDDRTPSAPGPARLLDRSAVRLREDLAAGELSAREVTEA
+ALAAAQTHADLGAFALLDAEGARARAAELDAAHPRVAPRAVPGPRTSPAPDDDGAPASLH
+GLPLAYKDLIDVRGMPTRFGSALLADAPPAAQDDPLALRLRAAGTVTLGKTTVPEFGLDS
+YSENLVTAPARNPLDPTRTAGGSSGGAAAAVAAGILPFAPGSDGGGSIRIPAAACGLVGL
+KPGRGELPMDEHADTVRNLTVSGPLAHTVEDAALLYDVLLSPEGLPGRVLPDLRRTVETA
+RAGGAVDARRIGVTTASPFASDLEISLARPAVTALTKAAAALDAGGHAVEDLSPYYGEDY
+HRDFRTVWTAGLLRAPLPEDAEAHVGAVAAHFLRTARAAGRAELDDAAHRLEEWARGVRA
+QFAAVDVVMTPVLATAPPPVGHFLAMEPEANYEAQCAFTPYTSMVNVLGLPAVAVPVLRD
+ERGLNWSVQLIGRPGTSAPLLALAAHLELLLAG
+>2_262
+MAVSEPLSPSDQPTSPTPAPDAPARLLGRTALALRDALAAGELSAAEVTEASLAAAHAHA
+GLGAFVLLDEDGARVRAAALDARPDDAAGASLRGLPLAFKDLTDVAGLPTRMGSAVLAQA
+PAAAEDDPLTTRLRAAGTVLLGKTTVPEFGLDAYSENPVDPPARNPLDPSRTPGGSSGGS
+AAAVAAGILPFAPGSDGGGSVRIPAAACGLVGLKPGRGTVPTDPGEDAVTNLTVSGPLAH
+TVEDAALLFDVMTSPEGLEGRTGPDLRRFLDARAAGEPVAPVRIGVSTASPFSPDLEITL
+ARPALSALARSGAALAAGGHAVDEFVPHYGERYHRDFRTAWTSGLLKAPLPDGAEALVGP
+VAASFLASARAAGPEQIATAIGRLEAWAADVRGQFAAVDVVMTPVLAFAPPAIGHFLALD
+PEENYAEQCRFTPYTSMVNVLGLPAVAVPVLRDEAGLSWSVQLVGRPGAEGRLLELAGHL
+RLLLAG
+>3_2020
+MTRATPVRLGRMQTSDAAPAADDDDRTPSAPGPARLLDRSAVRLREDLAAGELSAREVTE
+AALAAAQAHADLGAFALLDAEGARTRAAELDAAHPRVAPRAVPGPHTSPAPDDDGAPASL
+HGLPLAYKDLIDVRGMPTRFGSALLADAPPAAQDDPLALRLRGAGTVTLGKTTVPEFGLD
+SYSENLVTAPARNPLDPTRTAGGSSGGAAAAVAAGILPFAPGSDGGGSIRIPAAACGLVG
+LKPGRGELPMDEHADTVRNLTVSGPLAHTVEDAALLYDVMLTPEGLPGRVLSDLRRTVET
+ARAGDAVDVRRIGVTTASPFASDLEISLARPAVTALTKAAAALDAGGHAVEDLSPYYGED
+YHRDFRTVWTAGLLRAPLPEDAEAHVGAVAAHFLRTARAAGRAELDDAAHRLEEWAHGVR
+AQFAAVDVVMTPVLATAPPPVGHFLAMEPEANYEAQCAFTPYTSMVNVLGLPAVAVPVLR
+DERGLNWSVQLIGRPGTSAPLLALAAHLELLLAG
+>4_51
+MTLPTPVRLGRMQTSDAAPAADDDRTPSAPGPARLLDRSAVRLREDLAAGELSAREVTEA
+ALAAAQTHADLGAFALLDAEGARTRAAELDAAHPRVAPRAAPGPHTSPAPDDDGAPASLH
+GLPLAYKDLIDVRGMPTRFGSALLADAPPAAQDDPLALRLRAAGTVTLGKTTVPEFGLDS
+YSENLVTAPARNPLDPARTAGGSSGGAAAAVAAGILPFAPGSDGGGSIRIPAAACGLVGL
+KPGRGELPMDEHADTVRNLTVSGPLAHTVEDAALLYDVLLSPEGLPGRVLPDLRRTVETA
+RAGGAVDARRIGVTTASPFASDLEISLARPAVTALTKAAAALDAGGHAVEDLSPYYGEDY
+HRDFRTVWTAGLLRAPLPEDAEAHVGAVAAHFLRTARAAGRAELDDAAHRLEEWARGVRA
+QFAAVDVVMTPVLATAPPPVGHFLAMEPEANYEAQCAFTPYTSMVNVLGLPAVAVPVLRD
+ERGLNWSVQLIGRPGTSAPLLALAAHLELLLAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000354.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000354.fa
new file mode 100644
index 0000000000000000000000000000000000000000..88bd42a823e3d869224abfdeaf3d0bbead6df4b9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000354.fa
@@ -0,0 +1,65 @@
+>0_322
+MVSFSHTDAGTSEEAWAAAGVGALPVLESPAWDADTLLLVAVAHPDDETLGATGLIRSAL
+RGGARVHVLVATAGEASHPDSPTHAPEDLVRLRRAEMEHALDALAADLPGPGEDRRSALT
+WESLGLPDSGVAGREDAVRAAVVAALAAHPGPAVLASHDPGDGHADHEAVGRAVGELAGE
+RDLPLCAFPIWFWHWADPAELPARRYRRLALTDDDRAARRAALDAHASQVRPLSDAPGDE
+AVLGPQVLAHHDRPFEAHRLSGPDDADAHRAAAVFDRLYREHEDPWRYLSSPYEARKRAL
+TLAVLPRPRYGTVVEAGASIGVLTGEVAARADRVVGLEASPTAVERAAARLADTPHAEVR
+RAVLPGHWPDDVAGADLVIASEIGYFLQPEELDALVDDADAALAPGGELLLCHWRHPIEG
+WPLDGDAVHARVAADPRWRLRTELVEDDFRLSLHVRAAAATHAVVIVPAKDEQERLPAAL
+AALGAALDRWEEHHAQGSAAVVVAADRCDDATVAAAVAARHADPRVHVLELGEPGPGEAG
+VGRARAEAARRARALFPDVPAQRLWLASTDADSRVPADWLLAQTTAAGPDGALVLGTVDV
+REGALRRAWVRDYRHEEGHPHVHGANLGLPWSLYEAAGGFPPVAEHEDVRLVEAVRALAE
+ARVRATDTTRVLTSSRLTGRTPGGFAGHLQEVGGEAVPRRGAQARP
+>1_54
+MVSFSHTDDGTSEAAWAEGGVGELPELRLPVWDAQTLLLVAVAHPDDETLAATGLIRSAL
+RDGARVHVLVATAGEASHPHSPTHTPEDLVRLRRDEMEHALDALAAGLPASAGPGSPARD
+RLTWASLALPDSGVAEHEDAVRDAVAAALDAHPGPAVLASHDPGDGHADHEAVGRAVGAV
+AGECDLPLYAFPIWFWHWADPADLPARRYRRLPLTDDDRAARRAALDAHASQVRPLSAAP
+GDEAILGPAVLAHHERPFEAHRVSGPDDADAHRAAAVFDRLYRAQEDPWRYLSSSYEARK
+RALTLAALPRPRYGTVVEAGASIGVLTADVAARADRVVGLEASSTAVERAAARLAGAPHA
+EVRRAVLPADWPADVAGADLVIASEIGYFLQPEELDALIDDADAALAPGGELLLCHWRHP
+IEGWPLDGDAVHARVAADPRWRLRTELVEDDFRLSLHVRAAAATHAVVVVPAKDEQERLP
+AALAALAAALDRWEEHHAQGTAAVVVAADRCDDATVAAALEARAADPRIHVLELGEPTAG
+QAGVGRARLEGARRARALFPDVPAERLWLASTDADSRVPADWLLAQTVAAGHDEVLVLGT
+VDVHQGPLRQAWLRGYRHEEGHPHVHGANLGLPWSLYEAVGGFPPVAEHEDVGLAEAVRA
+LAGERDGGDGRRVRVIATDTTRVLTSSRLEGRTPGGFSGYLKAVGRPG
+>2_263
+MVSFDHRDDGTAEAVWMAAGVGELPALPARAWTRADTLLVAVAHPDDETLGAAGLIRAAL
+RGGAAVHVAVATAGEASHPDSPTHTPADLVRLRRAEMDHALAALADGLGPDAGALTWESL
+ALPDGGLTDRPDEVRAALERVLAGRTPAEEGGGAVVLVSHDPDDGHGDHDAVGAAAAALA
+ADHDLELYAFPLWLWHWGAPEDLAPRRYRRLELAAGDDAARLAALDAHASQTRPLSAAPG
+DEAILPERMIAHFTRGFETYRRTAPDDADASRASAVFDRLYREHEDPWRYLTSPYEARKR
+ALTLAVLPRPRYGTVVEAGASIGVLTAALAERAERVVGLEASQVAVERAAAHLAEIPHAE
+VRRAVLPADWPADVGPAEEGAGAPADLVVASEIGYFLQPEELDALVDAADASLGAGGELL
+LCHWRQPITGWPLDGDAVHDRVAADPRWRLLSEHVEADLRLSVHARAAAATHAVAVVPAM
+DEAEHLPAGLDALSAALDLWEAQHTQGSAAVVTVVPADDAPTLEAAHAARARDPRIRVLE
+LAPGAGGVGRARAAAARHARGLFPDVPAEALWLASTDADTRVPADWLVGQPALAARRRAD
+GQVLVLGTVDLPAHADDDLAHRWRADYEHREDHPHVHGANLGLPWGLYERAGGFAEVAEH
+EDVRLAEAVRALGEDRVLATDRVRVHTSSRLEGRTPGGFAGFLRGLLEEGAAEG
+>3_2018
+MVSFSHTDDGTSEAAWAEGGVGELPELRLPVWDAQTLLLVAVAHPDDETLAATGLIRSAL
+RGGARVHVLVATAGEASHPHSPTHTPADLVRLRRDEMEHALDALAAGLPASAGPGSPARD
+RLTWASLALPDSGVAEHEDAVRDAVAAALDAHPGPAVLASHDPGDGHADHEAVGRAVGAV
+AGECDLPLYAFPIWFWHWADPADLPARRYRRLPLTDDDRAARRAALDAHASQVRPLSAAP
+GDEAILGPAVLAHHERPFEAHRVSGPDDADAHRAAAVFDRLYRAQEDPWRYLSSSYEARK
+RALTLAALPRPRYGTVVEAGASIGVLTAAVAARAGRVVGLEASPTAVERAAARLAGAPHA
+EVRRAVLPADWPADVAGADLVIASEIGYFLQPEELDALIDDADAALAPGGELLLCHWRHP
+IEGWPLDGDAVHARVAADPRWRLRTELVEDDFRLSLHVRAAAATHAVVVVPAKDEQERLP
+AALAALTAALDRWEEHHAQGTAAVVVAADRCDDATVAAALEARAADPRIHVLELGEPTAG
+QAGVGRARLEGARRARALFPDVPAERLWLASTDADSRVPADWLLAQTVAAGRDEALVLGT
+VDVRQGPLRQAWLRGYRHEEGHAHVHGANLGLPWSLYEAVGGFPPVAEHEDVGLAEAVRA
+LAGERDGGEGRRVRVIATDTTRVLTSSRLEGRTPGGFSGYLKAVGRPG
+>4_49
+MVSFSHTDDGTSEAAWAEGGVGELPELRLPVWDAQTLLLVAVAHPDDETLAATGLIRSAL
+RGGARVHVLVATAGEASHPHSPTHTPEDLVRLRRDEMEHALDALAAGLPASAGPGSPARD
+RLTWASLALPDSGVAEHEDAVRDAVAAALDAHPGPAVLASHDPGDGHADHEAVGRAVGAV
+AGECDLPLYAFPIWFWHWADPADLPARRYRRLRLTDDDRAARRAALDAHASQVRPLSAAP
+GDEAILGPAVLAHHERPFEAHRVSGPDDADAHRAAAVFDRLYRAQEDPWRYLSSSYEARK
+RALTLAALPRPRYGTVVEAGASIGVLTADVAARADRVVGLEASPTAVERAAARLAGAPHA
+EVRRAVLPADWPADVAGADLVIASEIGYFLQPEELDALIDDADAALAPGGELLLCHWRHP
+IEGWPLDGDAVHARVAADPRWRLRTELVEDDFRLSLHVRAAAATHAVVVVPAKDEQERLP
+AALAALTAALDRWEEHHAQGTAAVVVAADRCDDATVAAALEARAADPRIHVLELGEPTAG
+QAGVGRARLEGARRARALFPDVPAERLWLASTDADSRVPADWLLAQTVAAGRDEALVLGT
+VDVRQGPLRQAWLRGYRHEEGHAHVHGANLGLPWSLYEAVGGFPPVAEHEDVGLAEAVRA
+LAGERDGGDGRRVRVIATDTTRVLTSSRLEGRTPGGFSGYLKAVGRPG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000356.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000356.fa
new file mode 100644
index 0000000000000000000000000000000000000000..99ffdb24808556c1f1cda2d8d2bded88b341151d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000356.fa
@@ -0,0 +1,20 @@
+>0_324
+MVSTDMDTTTQTPDERTLLRAAGLRVTRPRVAVLTALGECPHADAATVLAAVRRELPAVS
+HQAVYDSLHTLTDVGLVRSIQPAGSTARYEIRRNDNHHHLVCRDCGTVVDVPCHTGQAPC
+LEARTDHGFLIDEAEVYYWGLCPSCRADPGAAAS
+>1_52
+METTTRDEDERTLLRGVGLRVTRPRLAVLTALADHPHADASTVLAAVRRALPGTSHQAVY
+DCLHALTEAGLVRSLQPAGSPARYEICTGDNHHHLVCRGCGTVVDVPCRTGSAPCLDAPE
+GHGFAVDEAEVYYWGLCAGCRE
+>2_265
+MSTVTVEQPEESALLRSVGLRVTRPRVAVLQGLRRHPHADAGSLLSAVREDLPQVSHQAV
+YDCLHVLTDAGLVRSLQPAGSPARYELAAHDNHHHLVCRGCGDLVDVPCQTGVAPCLHAP
+EDHGFLIEEAEVYYWGLCPDCRSGGYTTTSDGTPAPAPPAP
+>3_2016
+METTTRDEDERTLLRGVGLRVTRPRLAVLTALADHPHADASTVLTAVRRALPGTSHQAVY
+DCLHALTEAGLVRSLQPAGSPARYEICTGDNHHHLVCRGCGTVVDVPCRTGSAPCLDAPE
+GHGFAVDEAEVYYWGLCAGCRE
+>4_47
+METTTRDEDERTLLRGVGLRVTRPRLAVLTALADHPHADASTVLAAVRRALPGTSHQAVY
+DCLHALTEAGLVRSLQPAGSPARYEICTGDNHHHLVCRGCGTVVDVPCRTGSAPCLDAPE
+GHGFAVDEAEVYYWGLCAGCRE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000357.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000357.fa
new file mode 100644
index 0000000000000000000000000000000000000000..058cfe8edab654ab7544f61c341764343b1c18a2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000357.fa
@@ -0,0 +1,55 @@
+>0_327
+MTEHTAAPPASERPGTPALPQDLIDVDALLTAYRTGRPDVSDPAQKVVFGTSGHRGSALK
+TSFNDDHIAAITQAVVEYRAEHGITGAVLVGKDTHALSGPAQDTAVEVLLGNDVEVLVDS
+RGGYTPTPAVSHAILHLNAGRDLTPAGFSADGDNAGLVDGLVITPSHNPPADGGFKYNPP
+HGGPADTEATTWIADRANALLAAGLEGVRRVAAADVDGHAKLGGFDFLDRYVTDLPDVID
+VEAIREAGVRIGADPMGGASVAYWGEIARRHGLDLTVVNPDADPRFGFMTLDWDGKIRMD
+CSSPHAMASLIERMTPDADGQAPYDVATGNDADADRHGIVTPDGGLMNPNHYLAVAIDYL
+YRHRERWPADAGVGKTLVSSSMIDRVAGDLGRELVEVPVGFKWFVPGLLTGTGVFGGEES
+AGASFVKLDGGPWSTDKDGLLLCLLAAEIIAVTGQSPSERYRDLVALHGSPAYARIDAPA
+TAEQKARLKTLSPDDVTVTELAGETILATLTNAPGNDAPIGGLKVVTQNAWFAARPSGTE
+DVYKIYAESFRGPEHLKQVQEEAQRLVDAVIG
+>1_51
+MTENTAALPAAERPGTPALPQDLIDVDALLEAYHTGHPDVTDPAQKVVFGTSGHRGSAFT
+TSFNDDHIAAITQAVVEYRAHHGITGPVLVGRDTHALSGPAQDTAVEVLLGNDVEVLVDS
+RGGYTPTPAVSHAILHLNAGRELSPSGFAVDGDNAGLVDGLVITPSHNPPADGGFKYNPP
+HGGPADTEATTWIADRANELLAAGLAGVHRVASADVAGHAKLGGFDFLDRYVSDLPQVID
+VEAIREAGVRIGADPMGGASVAYWGEIADRHGLDLTVVNPEVDPRFGFMTLDWDGKIRMD
+CSSPNAMASLIERMTPDADGHAPFDVATGNDADADRHGIVTPDGGLMNPNHYLAVAIDYL
+YRHRQQWPQSAGVGKTLVSSSMIDRVAGDLGRELVEVPVGFKWFVPGLLTGTGVFGGEES
+AGASFVQFDGSPWSTDKDGLLLCLLAAEIIAVTGQSPSERYRDLVALHGDPAYARIDAPA
+TAEQKAKLKTLSPDDVPVTELAGETILATLTNAPGNDAPIGGLKVVTQHAWFAARPSGTE
+DVYKIYAESFRGPEHLKQVQAEAQKLVDAVIG
+>2_267
+MSTPAAGRAGTPALPEDLIDVEALLAAYRDLHPDPADPAQKVVFGTSGHRGSALKSSFND
+DHIAAITQAVVEYRAEHGITGAILVGKDTHALSGPAQDTAVQVLLANDVEVLVDSRGGFT
+PTPAVSHAILHLNAGRDLTAAGFSADGDNAGLVDGLVITPSHNPPADGGFKYNPPHGGPA
+DTDATSWIAARANDLLAARLDGVTRLAPEDVEGHAKLGSFDFLDRYVTDLPQVIDLDAIR
+EAGVRIGADPMGGASVAYWGEIGRRHGLDLTVVNPDVDPQFGFMTLDWDGKIRMDCSSPN
+AMASLIERMTPDADGHAPFDVATGNDADSDRHGIVTPDGGLMNPNHFLAVSIDYLYRNRS
+QWPQNAGVGKTLVSSSMIDRVATDLGRELVEVPVGFKWFVPGLLSGTGVFGGEESAGASF
+VKFDGGAWSTDKDGLLLCLLAAEIQAVTGQSPSERYRDLVALHGDPAYARIDAPATAEQK
+AALKALSPDDVTATELAGETILAALTNAPGNDAPIGGLKVVTKNAWFAARPSGTEDVYKI
+YAESFLGEEHLKQVQQEAQAIVDAVIS
+>3_2015
+MTENTAALPAAERPGTPALPQDLIDVDALLEAYRTGHPDVTDPAQKVVFGTSGHRGSAFT
+TSFNDDHIAAITQAVVEYRAHHGITGPVLVGKDTHALSGPAQDTAVEVLLGNDVEVLVDS
+RGGYTPTPAVSHAILHLNAGRELSPSGFAVDGDNAGLVDGLVITPSHNPPADGGFKYNPP
+HGGPADTEATTWIADRANELLAAGLAGVHRVASADVAGHAKLGGFDFLDRYVSDLPQVID
+VEAIREAGVRIGADPMGGASVAYWGEIADRHGLDLTVVNPEVDPRFGFMTLDWDGKIRMD
+CSSPNAMASLIERMTPDADGQAPFDVATGNDADADRHGIVTPDGGLMNPNHYLAVAIDYL
+YRHREQWPQSAGVGKTLVSSSMIDRVAGDLGRELVEVPVGFKWFVPGLLTGTGVFGGEES
+AGASFVQFDGSPWSTDKDGLLLCLLAAEIIAVTGQSPSERYRDLVALHGDPAYARIDAPA
+TAEQKAKLKTLSPDDVPVTELAGETILATLTNAPGNDAPIGGLKVVTQHAWFAARPSGTE
+DVYKIYAESFRGPEHLTQVQAEAQRLVDAVIG
+>4_46
+MTENTAALPAAERPGTPALPQDLIDVDALLEAYHTGHPDVTDPAQKVVFGTSGHRGSAFT
+TSFNDDHIAAITQAVVEYRAHHGITGPVLVGKDTHALSGPAQDTAVEVLLGNDVEVLVDS
+RGGYTPTPAVSHAILHLNAGRELSPSGFAVDGDNAGLVDGLVITPSHNPPADGGFKYNPP
+HGGPADTEATTWIADRANELLAAGLAGVHRVASADVAGHAKLGGFDFLDRYVSDLPQVID
+VEAIREAGVRIGADPMGGASVAYWGEIADRHGLDLTVVNPEVDPRFGFMTLDWDGKIRMD
+CSSPNAMASLIERMTPDADGQAPFDVATGNDADADRHGIVTPDGGLMNPNHYLAVAIDYL
+YRHREQWPQSAGVGKTLVSSSMIDRVAGDLGRELVEVPVGFKWFVPGLLTGTGVFGGEES
+AGASFVQFDGSPWSTDKDGLLLCLLAAEIIAVTGQSPSERYRDLVALHGDPAYARIDAPA
+TAEQKAKLKTLSPDDVPVTELAGETILATLTNAPGNDAPIGGLKVVTQHAWFAARPSGTE
+DVYKIYAESFRGPEHLTQVQAEAQKLVDAVIG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000359.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000359.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7da7c0375e93d8a78d7eb288fefa7e8f8eb7887d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000359.fa
@@ -0,0 +1,40 @@
+>0_333
+MPRVSSRPHTGRDRLVWVDVARGVALVSMFVAHVAPSGGPAGVLNLSEHLTAALFAALVG
+VSARLEVQGLGVGRALVRAMVRAAALLGAAWLTSLFDAAVVDVLTHLAVITVLMALLAAL
+PLAVHLVLALLAGGGGILLTASGTLAVADALAPAARALGLDPAELVPAVAGFLTAGPYRL
+TAFLGWALLGAVLVRTVHGTTTALPRSGRLVGLGWGVGGVVLAGLVILLSRVQTGAAPVP
+YTGTAAEILVDTGLVLGVLGLCAAVVPSRPSPATDLLAVPGSMTLSVYVAHQAYLGWVLT
+AGPGPWVDGRGADDTWFNLAVLLAGGILLPLLWRGLVRVRPFRAGPLEGVVRLVTDPIGR
+RSRGEH
+>1_43
+MPAPSSHAPAATHTARGRLVWVDVARGLALVAMMVAHTAPAGGPGGVLHLSEHLTAPLFA
+ALVGVGARLEAEWLGRGRAVPRALVRAAALCGAAWLTGHFGAAVVNVLAHLAVLTVIMAL
+LAALPLAAHLVLAVLAGGGGLLLAATPTADVVDRLVPLAQALGLSRATLTPYVSAFLTDG
+PYRLPLFLTWALLGAVLVRTVHGTTTAAPARSARLTGLAWAAGGIALAGVVLALSRTQTG
+AAPVPYTATPAEALLDTGLVLTVLGACAALAPRRAGLLAVPGAMTLSVYVAHLWYLGWVR
+RLGPGPWRSATGTDDTWFNLAVLVAGALLLPLLWRAVVRIGPFRAGPLEGVVRLLTAPFD
+RAR
+>2_281
+MTLAAGHRLTWVDVARGLALVSMFVAHTAPTGGPGGVLNLSEHLTAALFAALVGVSAHLE
+QRRHGFWRAFLRAVVRAAALCGAAWLTSHFGAAVVDVLTHLAVLTVLMSVLALLPGLVQL
+LLVPAAAWAGVRVGALTADDVAARLEPARALVPAQVRPGPAVVAEQAAAFFTVGPYFLLF
+FTAWALLGAVVVRSVQGGGLRAALRLGGHPGPGLGGRAAGGVWAGVGLLVGGAGVALARQ
+RTEDSPVPYEATWDYALLAAGLVLIVLGACAAVVPSHVPWLTAVLAVPGSMTLSVYVAHQ
+AYLGWVLRAGPGPWLSELGTDDTWFNVGALCAAGLLLPLLWRALVRAEPWRRGPLEGPVA
+LVTHGLARR
+>3_2007
+MPAPSSHAPAATHTARGRLVWVDVARGLALVAMMVAHTAPAGGPGGVLHLSEHLTAPLFA
+ALVGVGARLEAEWLGRGRAVPRALVRAAALCGAAWLTGLFGAAVVNVLAHLAVLTVLMAL
+LAALPLAAHLVLAVLAGGGGLLLAATSTADVVDRLVPLAQALGLSRATLTPWVSAFLTDG
+PYRLPLFLAWALLGAVLVATVHGTTTAAPARRARLTGLAWAAGGIALAGVVLALSRTQTG
+AAPVPYTATPAEALLDTGLVLAVLGACAALAPRRAGLLAVPGAMTLSVYVAHLWYLGWVR
+RLGPGPWRSATGADDTWFNLAVLVVGALLLPLLWRAVVRVGPFRAGPLEGVVRLLTAPFD
+RAR
+>4_38
+MPAPSSHAPAATHTARGRLVWVDVARGLALVAMMVAHTAPAGGPGGVLHLSEHLTAPLFA
+ALVGVGARLEVEWLGRGRAVPRALVRAAALFGAAWLTGLFGAAVVNVLAHLAVLTVLMAL
+LAALPLAAHLVLAVLAGGGGLLLAATPTADVVDRLLPAAQALGLSRATLTPWVSAFLTDG
+PYRLPLFLAWALLGAVLVATVHGTTTAAPARRARLTGLAWAAGGIALAGVVLALSRTQTG
+AAPVPYTATPAEALLDTGLVLIVLGACAALAPRRAGLLAVPGAMTLSVYVAHLWYLGWVR
+RLGPGPWRSATGADDTWFTLAVLVAGALLLPLLWRAVVRIGPFRAGPLEGVVRLLTAPFD
+RAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000361.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000361.fa
new file mode 100644
index 0000000000000000000000000000000000000000..dfd4e1d2c86b2286f3a33c2512ee88a289e0f958
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000361.fa
@@ -0,0 +1,25 @@
+>0_338
+MGTLTGRTVLISGATSASGLAAARALLAAGADVVATGRSPERLAPLAALGADTAALDLSD
+EAAVRGLVEDLHARGVRVDGLLHLVGGWRGGGGLAGQSEEDYRALESSLTALRHVSRALD
+DDLRASSAGRLAIVSSTAVARPLAGGAAYAAVKAASEAWTRAVAQGWDKAARDAGTELRG
+AAVVLRVKSLAGLEDRLAEQFVRLWSADAAQLNDSILAVQEKETA
+>1_46
+MAALTDRAVLIAGATSASGRAAARTLLDAGAHVVATGRDAAKLAPLAGLGAETATLDLTD
+ETAVRGLVEDLHARGTRIDGLLHLVGGWRGGGGLAGQTEADYRALEASFTALRHVSRALD
+DDLRASSAGRLAIVSSTAVTRPLAGGANYAAVKAASEAWTRAVAQGWAKATRDAETPLRS
+AAVVFRVKSLAGLEERLAEEYARLWKAEAGALNDAVLTLQEKGT
+>2_1194
+MSAPAAPDLTGALVLVTGASSGIGSALARGLAAAGADLVLVARRAGRLAALADELRAAHR
+TEVTVLPRDLAAPDAGPALRAELSSRGPRVTGLVNNAGFGSGLPFGREDPARLEAMPAEE
+ERGRERVLCVSPSSTGTEFFDVAGTPGAGGGFARRAAPDDVAAAVLRVLARRGGPAEVVP
+HDRAVTVAARLLPRTVLRGMGAMHRRGAARR
+>3_2010
+MAALTDRAVLIAGATSASGRAATRTLLDAGAHVVPTGRDAAKLAPLAALGAETAALDLTD
+EAAVRGLVEDLHARGTRIDGLLHLVGGWRGGGGLTGQTEDDYRALEASFTALRHVSRALD
+DDLRASSAGRLAIVSSTAVTRPLAGGANYAAVKAASEAWTRAVAQGWAKAARDAEAPLRS
+AAVVFRVKSLAGLEERLAEEYARLWKAEAGALNDAVLTLQEKGTD
+>4_41
+MAALTDRAVLIAGATSASGRAAARTLLDAGAHVVATGRDAAKLAPLAELGAETAALDLTD
+ETAVRGLVEDLHARGTRIDGLLHLVGGWRGGGGLAGQTEEDYRALEASFTALRHVSRALD
+DDLRASSAGRLAIVSSTAVTRPLAGGANYAAVKAASEAWTRAVAQGWAKAARDAEAPLRS
+AAVVFRVRSLAGLEERLAEEYARLWKAEAGALNDAVLTLQEKGTD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000362.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000362.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b8afab6877ec7e91354e931482e48531e9ab4e61
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000362.fa
@@ -0,0 +1,30 @@
+>0_340
+MPALPLPPRRPRLIATDLDGTIIGYRHTRSGYLSPRTVAALQEAHETGVEVVFVTGRPLR
+WLGALSEQLGQVGPVICSNGAVVVDTATDEVLLHHSMDRDAVWDAVGRLRALDRSATFGA
+ETLDGFFWESAFSEWGELEEGFRTAQRLEGVLPAHVDVVKLMARSSTMDPDVFLAAAREE
+LGALLNATHSAPGVSLVEMAAPGVHKAATLAEFAARRGVDARDVVAFGDMPNDTEMLAWA
+GLGLAVASGHESLLAVADAVVGECDDDGVAQAIELLLELPAE
+>1_41
+MPALSLPSRRPRMIATDLDGTIIGYRHTRSGRLSPRTIVALRDARDAGVEVVFVTGRPLR
+WLGPLSAQLGPVGPVICSNGAVVVDTATDDVLIAHPMRVEAVWTATDRLRALDRTVSFGA
+ETLEGFFWEHAFSERAEFRAEVHAAATLEAALPGRLGVVKLMARSDTLAPDAFLAAARAE
+LDELVSATHSAPGIALVEMSAPGVHKAATLAEFAASRGVAPADVVAFGDMPNDLEMLQWA
+GLGLAVASGHPSLLAAADGVVGACDDDGVAATVERLLELPTD
+>2_283
+MSALPASARRPRLIATDLDGTVIGYAHTRTGRISPRTVAALRRAHAEGIVVVFVTGRPLR
+WLGPLRAQLGEVGPVICSNGAVVADTATDEVLLHHALDRAAIDHVVRRIRALDPAATFGA
+EALEGFFWEDAFASDELGQTRAASLEAALPGDATVVKLMAKSGGIEPDVFLAAVRELGDG
+LVTATHSAPGMSLVEMSAPGVHKAATLAAFARGTGVEAADVVAFGDMPNDAEMLAWAGLG
+LAVASAHASLRAVADGVVGACDDDGVAAAIEALLALPEA
+>3_2005
+MPALPLPSRRPRMIATDLDGTIIGYRHTRSGRLSPRTIAALRDAHDAGVEVVFVTGRPLR
+WLGPLSAQLGPVGPVICSNGAVLVDTATDDVLIAHPMPVEAVWTATDRLRALDRTVSFGA
+ETLEGFFWEHAFSERAEFRAEVHAAATLEAALPGRLGVVKLLARSDTLAPDAFLAAARAE
+LDELVSATHSAPGIALVEMSAPGVHKAATLAEFAASRGVAPVDVVAFGDMPNDLEMLQWA
+GLGLAVASGHPSLLAAADGVVGACDDDGVAATVERLLELPTD
+>4_36
+MPALPLPSRRPRMIATDLDGTIIGYRHTRSGRLSPRTIAALRDAHDAGVEVVFVTGRPLR
+WLGPLSAQLGPVGPVICSNGAVLVDTATDDVLIAHPMPVEAVWTATDRLRALDRTVSFGA
+ETLEGFFWEHAFSERAEFRAEVHAAATLEAALPGRLGVVKLLARSDTLAPDAFLAAARAE
+LDELVSATHSAPGIALVEMSAPGVHKAATLAEFAASRGVAPVDVVAFGDMPNDLEMLQWA
+GLGLAVASGHPSLLAAADGVVGACDDDGVAATVERLLELPTD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000367.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000367.fa
new file mode 100644
index 0000000000000000000000000000000000000000..75df689c8790dc8a1f5311f04fdd0b5522a4dec0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000367.fa
@@ -0,0 +1,29 @@
+>0_346
+MMASKTPHQNTTFDLPSKDASHDGDQVGHGYLALPESGSGPAVIVIQEWWGLVDHIKDVC
+DRLAAEGFVALAPDLYGGWIAHDGDEAGEMMQKLPAEEGARQLAGAVDWLLAREEVTSTT
+VGAIGFCMGGGFVLALAAQQGEKVSAAVPFYGVGQGVPGDFAGVKAAIQGHYGEQDSMFS
+VEDAKKQEQQIRDESGAEVEYFYYDAPHAFHNDDDPQGNYRPEAAALAWGRAVAFLKEKV
+R
+>1_35
+MMASKTPHQNVTFDLPTKDAGQDGDRTGHGYLALPASGKGPGVIVIQEWWGLVDHIKDVC
+DRLADLGFVALAPDLYGGWIAHDGDEAGEMMQNLPAEEGARQLAGAVDWLLARDEVTSQT
+VGAIGFCMGGGFVLALAAQQGDKVSAAVPFYGVGQGVPGDFSGVTAAVQGHYAEQDDSFP
+VEDARRQEQQIREESGADVEYFYYDAPHAFHNDENPQGNYRPEAAALAWDRAVSFLKEKV
+R
+>2_288
+MMASKTPHQNVSFPLPTKDAAHGDQTGHGYLALPAAGKGPAVIVIQEWWGLVDHIKDVCD
+RLAEEGFVALAPDLFGGWIAHDGDEAGEMMQNLPAEEGARQLAGAVDWLLARDEVTSSRV
+EAIGFCMGGGFVLALAAQQGDKVSAAVPFYGVGQGVPGSFEGVTAAIQGHYAEQDDFFPV
+EDAKKQERQIREESGAEVEYFYYDAPHAFHNDENPQGNYRPEAAQLAWDRAVSFLKEKVR
+>3_1999
+MMASKTPHQNVTFDLPTKDAGQDGDRTGHGYLALPASGKGPGVIVIQEWWGLVDHIKDVC
+DRLADLGFVALAPDLYGGWIAHDGDEAGEMMQNLPAEEGARQLAGAVDWLLARDEVTSQT
+VGAIGFCMGGGFVLALAAQQGDKVSAAVPFYGVGQGVTGDFSGVTAAVQGHYAEQDDSFP
+VEDARRQEQQIREESGADVEYFYYDAPHAFHNDENPQGNYRPEAAALAWDRAVSFLKEKV
+R
+>4_30
+MMASKTPHQNVTFDLPTKDAGQDGDRTGHGYLALPASGKGPGVIVIQEWWGLVDHIKDVC
+DRLADLGFVALAPDLYGGWIAHDGDEAGEMMQNLPAEEGARQLAGAVDWLLARDEVTSQT
+VGAIGFCMGGGFVLALAAQQGDKVSAAVPFYGVGQGVPGDFSGVTAAVQGHYAEQDDSFP
+VEDAREQAQQIREESGADVEYFYYDAPHAFHNDENPQGNYRPEAAALAWDRAVSFLKEKV
+R
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000368.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000368.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7191efeb3be26971946abc9986cf486603662902
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000368.fa
@@ -0,0 +1,24 @@
+>0_347
+MAQVTTGTWNLDPAHSDVDFVVRHAGISKVRGTFAAVEGVLVVAEDFNASSVEVTVDVAS
+INTKNEGRDQHLRSGDFFDVEQFPTMTFRSTEVRGAAEEFTLVGELTLHGVTRTVELEAE
+LGGQDVDPFGTTRVGFEATGEISRKDFGLTWNAATEAGGVLVSDKVKLEIGAAFVLPEAD
+AQA
+>1_30
+MHAITPGTWNLDPAHSDVDFVVRHAGISKVRGTFHAVEGQLVIAEEFTQSSVEVTVDVAS
+ISTKNEGRDAHLRSADFFDVEQFPTMTFRSTEVRGEPEEFTLVGELTLHGVTRTVELEAE
+FGGQDKDPFGATRVGFEATGEISRKDFGLTWNAATEAGGVLVSDKVKLEIGAAFVLSEAD
+AQA
+>2_289
+MAQITPGTWNLDAAHSDVDFVIRHAGISKVRGTFHTVDGQLVVAEDFNQSSVQVTVDMAS
+INTKNEGRDQHLRSADFFDVEQFPQMTFRSTEVRGEAEDFTVVGELTIHGVTKTVELEAE
+FGGQDKDAFGATRVGFEAKGEISRKDFGLTWNAATEAGGVMVSDKVKIEIGAAFVLPEA
+>3_1998
+MHAITPGTWNLDAAHSDVDFVVRHAGISKVRGTFHAVEGQLVIAEEFTQSSVEVTVDVAS
+ISTKNEGRDAHLRSADFFDVEQFPTMTFRSTEVRGEPEEFTLVGELTLHGVTRTVELEAE
+FGGQDKDPFGATRVGFEATGEISRKDFGLTWNAATEAGGVLVSDKVKLEIGAAFVLSEAD
+AQA
+>4_29
+MHAITPGTWNLDAAHSDVDFVVRHAGISKVRGTFHAVEGQLVIAEEFTQSSVEVTVDVAS
+ISTKNEGRDAHLRSADFFDVEQFPTMTFRSTEVRGEPEEFTLVGELTLHGVTRTVELEAE
+FGGQDKDPFGATRVGFEATGEISRKDFGLTWNAATEAGGLLVSDKVKLEIGAAFVLPEAD
+AQA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000371.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000371.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d10a69567bce51b8c636c55242c195bf44fb3d5c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000371.fa
@@ -0,0 +1,25 @@
+>0_356
+MSELAVAVLRMGLLLALWVLIISIVMAQGRDLVVGRRNKTRLQQAQRDAGLVTAVPAAGV
+AGAGSSAVDRPAPASTPAPAASAPTTPAPRLSRTLRVVEGPKAGQTIALEGRPLLMGRAQ
+DADLVLVDDYASGRHARLFPQGTRWFLEDLGSTNGTYVNGAPVTRALPVGPGTAIRIGKT
+VMELEA
+>1_21
+MSELAVAVLRMGLLLALWVLIISIVMAQGRDLVVGRRNKTRLQQAQRDAGLVTAVPAAGA
+AGAGSSAVDRPAPASTPSPAASAPTTPAPRLSRTLRVVEGPKAGQTIALEGRPLLMGRAQ
+DADLVLVDDYASGRHARLFPQGTRWFLEDLGSTNGTYVNGAPVTRAVPVGPGTAIRIGKT
+VMELEA
+>2_339
+MNELAVAVLRLGLLLALWILIISIVLSQGRDLVVGRRNKLRLEQARRDAGLVTAVPAAGA
+HAASADRPAPAATPAAERPAPVPPAPAPRLARTLRITEGPLAGQTVDLGGRPLLIGRAQD
+ADLVLVDDYASGRHARLFPQGTRWFLEDLGSTNGTFVDGDPVTRTLPVGTSSTIRIGKTV
+MGLED
+>3_1990
+MSELAVAVLRMGLLLALWVLIISIVMAQGRDLVVGRRNKTRLQQAQRDAGLVTAVPAAGA
+AGAGSSAVDRPAPASTPSPAASAPTTPAPRLSRTLRVVEGPKAGQTIALEGRPLLMGRAQ
+DADLVLVDDYASGRHARLFPQGTRWFLEDLGSTNGTYVNGAPVTRALPVGPGTAIRIGKT
+VMELEA
+>4_21
+MSELAVAVLRMGLLLALWVLIISIVMAQGRDLVVGRRNKTRLQQAQRDAGLVTAVPAAGV
+AGAGSSAADRPAPASTPSPAASAPTTPAPRLSRTLRVVEGPKAGQTIALEGRPLLMGRAQ
+DADLVLVDDYASGRHARLFPQGTRWFLEDLGSTNGTYVNGAPVTRALPVGPGTAIRIGKT
+VMELEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000374.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000374.fa
new file mode 100644
index 0000000000000000000000000000000000000000..57a1b7e2fa230d638cf962c6eb1af28583cabf91
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000374.fa
@@ -0,0 +1,50 @@
+>0_359
+MNEAIRRTWTVMAAMMLVLALAASVIQVLAADQLKTHALNSRQMFLEFGAPRGPILVDGE
+PIAESVPSDDAYHYQRVYHDPELYAPLTGFYSLTYGTDGLEAAMNEQLSGTPTSQFVDRA
+MEIITGATPEGDQVELTIDPELQRVAYDALPDGVRASAVVTDPTTGEILAMVSKPGFDSN
+ALSSHSATEAQSAMAAIDQIPGASAYRNRAAEQLVSPGSTFKLIDAVAMLESGDYTPDGT
+VDIPAAWPLPGTTTELPNYDGSPCNTVGRQTLTWALAQSCNTPFAMAAVKLGQDRIREVA
+ERFGFNDSFDYPLPVTASVFPSDLDDAALAQSSIGQRDVQATALQMAMVAAGIANDGVVM
+EPQLIKAVRRPDLTTVEEFSPRERGRATTPEVAGQVSDMMVSAVEDGILGSVQSDTVRIA
+AKSGTAEVGDTGNVHSWITGFDASENPRAAVTIVVEDEPPGIGHQTIVSGIKAITEAVVT
+E
+>1_18
+MNEAIRRTWTVMAAMILVLALAASVIQVLAADQLKTHALNSRQMFLEFGAPRGPILVDGE
+PIAESVPSDDAYHYQRVYHEPELYAPLTGFYSLTYGTDGLEAAMNEQLSGTPTSQFVDRA
+MEIITGATPEGDQVELTIDPELQRLAYDALPDGVRASAVVTDPTTGEILAMVSKPSFDSN
+ALSSHSPAEAQAAMAAIDQIPGASAYRNRAAEQLVSPGSTFKLIDAVAMLESGDYTPDGT
+VDIPAAWTLPGTTTELPNYDGSPCNTVGRQTLTWALAQSCNTPFAMAAVELGQDRIREVA
+ERFGFNDSFDYPLPVTGSVFPSDLDDAALAQSSIGQRDVQATALQMAMVAAGIANDGVVM
+EPQLIKAVRRSDLTTVQEFSPRERGRATTPEVAGQVSDMMVSAVEDGILGSVQSDTVRIA
+AKSGTAEVGDTGNVHSWITGFDASENPRAAVTIVVEDEPPGVGHQTIVSGMKAIMEAVVT
+E
+>2_342
+MNEAIRRTWTVMVAMFLVLAVAASVIQVVAADSLKENKLNNRQLFLEFGAPRGPILVDGT
+PVAQSVPSGDAYNYQRVYRDSLLYAPLTGHYSLAYGTAGMEKAMNGELAGTSSSQFLDRA
+LEIVTGSTPEGDQVELTLDSELQKLAYESIPDGVKGSVVATDPKTGRVLAMASKPSYDAN
+TISSHTRSEATAAMSAYEGVPGLTVGQNRPTQQRVAPGSTFKLIDLVAMLESGDYAPDQV
+LDVPAAWTLPGTRTQMSNFDGGRCNGVGRATLTWIVANSCNTPFAQAAVALGQDEIRSVA
+ERFGFNQDGSMPLPVTASVFPEDLDDAALAQSAIGQRDVQATALQMNMVAAGIANDGMVM
+EPNLVQAVRRPDLTTVSEFSPREHGRAMDPDVAHQVRDMMVATVEDGTASAAKSSTLQIA
+AKTGTAEKDGTANVNTWVTGFAPAQDPKVAVTIVYEDQNSSSAHTQAVESMQRIMEAVVA
+E
+>3_1987
+MNEAIRRTWTVMAAMILVLALAASVIQVLAADQLKTHALNSRQMFLEFGAPRGPILVDGE
+PIAESVPSDDAYHYQRVYHEPELYAPLTGFYSLTYGTDGLEAAMNEQLSGTPTSQFVDRA
+MEIITGATPEGDQVELTIDPELQRLAYDALPDGVRASAVVTDPTTGEILAMVSKPSFDSN
+ALSSHSPAEAQAAMAAIDQIPGASAYRNRAAEQLVSPGSTFKLIDAVAMLESGDYTPDGT
+VDIPAAWTLPGTTTELPNYDGSPCNTVGRQTLTWALAQSCNTPFAMAAVELGQDRIREVA
+ERFGFNDSFDYPLPVTGSVFPSDLDDAALAQSSIGQRDVQATALQMAMVAAGIANDGVVM
+EPQLIKAVRRSDLTTVQEFSPRERGRATTPEVAGQVSDMMVSAVEDGILGSVQSDTVRIA
+AKSGTAEVGDTGNVHSWITGFDASENPRAAVTIVVEDEPPGVGHQTVVSGMKAIMEAVVT
+E
+>4_18
+MNEAIRRTWTVMAAMLLVLALAASVIQVLAADQLKTHALNSRQMFLEFGAPRGPILVDGE
+PIAESVPSGDAYHYQRVYHETELYAPLTGFYSLTYGTDGLEAAMNEQLSGTPTSQFVDRA
+MEIITGATPEGDQVELTIDPELQRLAYDALPDGVRASAVVTDPTTGEILAMVSKPGFDSN
+ALSSHSPAEAQSAMAAIDQIPGASAYRNRAAEQLVSPGSTFKLIDAVAMLESGDYTPDGT
+VDIPAAWTLPGTTTELPNYDGSPCNTVGRQTLTWALAQSCNTPFAMAAVELGQDRIREAA
+ERFGFNDSFEYPLPVTASVFPSDLDDAALAQSSIGQRDVQATALQMAMVAAGIANDGVVM
+EPQLIEAVRRSDLTTVQEFSPRERGRATTPEVAGQVSDMMVSAVEDGILGSVQSDTVRIA
+AKSGTAEVGDTGNVHSWITGFDASENPRAAVTIVVEDEPPGVGHQTVVSGMKAIMEAVVT
+E
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000375.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000375.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8b3eca04c8affde15c1c18111a6fd2c3b906de50
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000375.fa
@@ -0,0 +1,64 @@
+>0_360
+MRPTSGITLGGRYQLTDRIAIGGMGEVWKARDKVLGRITAVKILKEEYTGDPNFLRRFRA
+EAQHTALLNHPGVANVYDYGEEKGSAYLVMELVPGQPLSAILEKEKVLSPERTLRIIAQT
+AAALSAAHAQGLVHRDVKPGNLMITPTGRVKVTDFGIARLADQVPLTATGQVMGTAQYLA
+PEQATGQQATGSSDLYSLGIIGYEALAGHRPFTGESQIAIALAQVNDAPPPLPSTVPAPV
+RALIMCMLSKDPKERPTDATAASEAADALRRKDTRAAVEAVPGLAAFLAAEGVADPSGAE
+TAPLDYDGMRTAHPRPEGTRADGTPATAALPVTAAQPRTDDGARGSAATAAGAAGAAGLA
+GAAAAGARPANEEIAAVRDPQTRPSDVVQEAPPAGQGSAPVKRRRANRWPVFALLGLVLF
+ALLGALLWPWITGDRTPGGSTPSGTSQASSVSVDPEAYKGRPAAEVRAELERLGLVVREE
+DRDARNPRGTVEEVNPVGSLQRGETVTLAVSTGEGVVPDGLVGQPVDSAIQLLRDRGFTV
+DRVDDPSADGAEGEVVRVVPGEGQRHRYDTHVQLIVAGGAGGDEPAPTPEPSEPAEPTAE
+PSDEPTTEPTSEPTEEPTTEPTAPSEEPTEEPTEEPTTEPTSDPTGEPTGEPTADPTDDA
+GGSASPTAEESPTA
+>1_17
+MRPTSGITLGGRYQLTDRIAIGGMGEVWKARDKVLGRITAVKILKEEYTGDPNFLRRFRA
+EAQHTALLNHPGVANVYDYGEEKGSAYLVMELVPGQPLSSILEKEKVLSPERTLRIIAQT
+AAALSAAHAQGLVHRDVKPGNLMITPTGRVKVTDFGIARLADQVPLTATGQVMGTAQYLA
+PEQATGQQATGSSDLYSLGIIGYEALAGHRPFTGESQIAIALAQVNDTPPPLPDTVPAPV
+RALIMCMLSKDPKERPSDATALSEAADALRRKDTRGAVEAVPGLAVFLEEQGVADPSGAE
+TAPLDYDGLRTTHPRTEGIRTDGSPATAALPVTAAQPRTDDAARGPGAAGAAAVGAAGAA
+ASASTRDHEIAAVRDQQTRPGDVVDPGPPAGGGSAPARRRRANPWPLWALLGLVVFALLG
+ALLWPLLTGGRGDGGSAPATSQEESSVNVDPEAYKGRPVSEVRAELEGLGLAVREEDRDA
+QSPQGTVEEINPVGALQRGETVTLAVSTGEGVIPEGLVGQPVDSAIQTLRDRGFTVDRVD
+DPSADGADGEVVRVVPGEGERHRYDTHVQLIVATGGSDAAPTREASQPASEPVPSASEEP
+SSEPSPSASDEPSPSPTAESPTATADPEPTQEPTEEPTTPTGDPTTESSGESTAPTGEPT
+TDPSADARGAEASSADATPSA
+>2_343
+MRPTSGITLGGRYALTDRIAIGGMGEVWKARDKVLGRITAVKILKEEYTGDPNFLRRFRA
+EAQHTALLNHPGVANVYDYGEEKGSAYLVMELVPGQPLSAILEKDRTLSTDRTLSIIRQT
+AAALSAAHAQGLVHRDVKPGNLMITPTGRVKVTDFGIARLADQVPLTATGQVMGTAQYLA
+PEQATGQQATGSSDIYSLGIIGYEALAGHRPFTGESQIAIALAQVNDTPPALPDTISAPV
+RALIMCMLSKNPKDRPANATALSEAAEALRRKDVAGAVAAVPTLAAFLADQGVHSTGGPG
+DAETTALDAAPRTAPQPTVPLGTTTEPAAPATAALPVAAARPDVAATRSPRAAEPARSVP
+AAAPADPAPRTAKPRRRNRWPLFALLALVAFAVLGALLYPLLSGESGAGAGASSSTGTDA
+QVEVDAAAYRGRPADEVRAELEGRGLAVEEEQRDANDPQGTVVEVTPTGTLRRGDTVTLA
+VSTGQGTIPQDLVGQPADTVVGILRDRGFSVDRVDDPNADGATGQVVRVVPGEGQTHRFD
+TPVQVIVAGGTGSSPVTQSVVTAPTAAPASESPAEPAPASSSSGDPAPSSAQPTPSEAST
+EPSPESPAPTSESAAPSTEPSAGTPSTPDASGPSSQGSDAGSPSTDPAG
+>3_1986
+MRPTSGITLGGRYQLTDRIAIGGMGEVWKARDKVLGRNTAVKILKEEYTGDPNFLRRFRA
+EAQHTALLNHPGVANVYDYGEEEGSAYLVMELVPGQPLSSILEKEKVLSPERTLGIIAQT
+AAALSAAHAQGLVHRDVKPGNLMITPTGRVKVTDFGIARLADQVPLTATGQVMGTAQYLA
+PEQATGQQATGSSDLYSLGIIGYEALAGHRPFTGESQIAIALAQVNDTPPPLPDTVPAPV
+RALIMCMLSKDPKERPSDATALSEAADALRRKDTCGAVEAVPGLAVFLEEQGVADPSGAE
+TAPLDYDGMRTTHPRAEGTRADGSPATAALPVTAAQPRTDDAARGPGAAGAAAVGAAGAA
+GAAGAVASTRDHEIAAVRDQQTRPGDVVDPAPPAGGGSAPARRRRANRWPLWALLGLVVF
+ALLGALLWPLLTGGRGIGGSAPATSQDESSVRVDPEAYRGRPVSEVRTELEGLGLAVREE
+DRDAQSPQGTVEEINPVGALRRGETVTLAVSTGEGVIPEGLVGQPVESAIQTLRDRGFTV
+DRVDDPSADGADGEVVRVVPGEGERHRYDTHVQLIVATGGSDAAPTREASQPASEPEPSA
+SEEPSTEPSPSASDEPSPSPTAESPTATADPEPTPEPSEEPTTPTGDPTTESSGESTAPT
+GESTTDPSADARGAEASSADATPSA
+>4_17
+MRPTSGITLGGRYQLTDRIAIGGMGEVWKARDKVLGRITAVKILKEEYTGDPNFLRRFRA
+EAQHTALLNHPGVANVYDYGEEEGSAYLVMELVPGQPLSSILEKEKVLSPERTLGIIAQT
+AAALSAAHAQGLVHRDVKPGNLMITPTGRVKVTDFGIARLADQVPLTATGQVMGTAQYLA
+PEQATGQQATGSSDLYSLGIIGYEALAGHRPFTGESQIAIALAQVNDTPPPLPDTVPAPV
+RALIMCMLSKDPKERPSDATALSEAAEALRRKDTCGAVEAVPCLAVFLEEQGVADPSGAE
+TAPLDYDGMRTTHPRAEGIRTDGSPATAALPVTAAQPRTADDARGPGAAGAAAVGAAGAA
+GAAASTRDHEIAAVRDQQTRPGDVVDPGPPAGGGSAPARRRRANRWPLWALLGLVVFALL
+GALLWPLLTGGRGVGGSAPATSQEESSVHVDPEAYRGRPVSEVRTELEGLGLAVREEDRD
+AQSPQGTVEEINPVGALRRGETVTLAVSTGEGVIPEGLVGQPVESAIQTLRDRGFTVDRV
+DDPSADGADGEVVRVVPGEGERHRYDTHVQLIVATGGSDAAPTREASQPASEPEPSASEE
+PSTGPSPSASDEPSPSPTAESPTATADPEPTPEPSEEPTTPTADPTTESSGESTAPTGEP
+TTDPSADARGAGASSADATPSA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000377.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000377.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d9aaeef3ec7c8e310b1d6e1fac6131afbe382924
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000377.fa
@@ -0,0 +1,25 @@
+>0_363
+MSGTVPSPEVSVLVVDNYDSFVYTLVGYLEELGARTTVIRNDEVDAARALELAAEHTAVL
+ISPGPGAPADAGVSLDLIRAAADGGRPLYGVCLGHQAIAEAFGATVTHAESLMHGKTSLV
+RHGDHPMFAGLPERFTATRYHSLAAVRSTVDEAVLQITAETEDGVVMGLAHRSAPLWGVQ
+FHPESVLTEGGYRMLGNWLESVGLTGAADRGGRLSPLVRGD
+>1_15
+MQSPEVSVLVVDNYDSFVYTLVGYLEQLGARTTVIRNDEVTPARALELAAEHTAVLISPG
+PGAPADAGVSLDLIRSAADGGRPLFGVCLGHQAIAEAFGATVTHAESLMHGKTSLVRHGE
+HPMFEGVPSPFTATRYHSLATVRPTVDEAVLEITAETEDGVVMGLAHRTAPLWGVQFHPE
+SVLTEGGYRMLGNWLESVGLSGAAERGGRLSPLVRQD
+>2_345
+MSTPPESAPTAVSVLVVDNYDSFVYTLVGYLQELGARTTVIRNDEVSPARALELAAQHDA
+VLISPGPGTPSEAGVSLDLIRSAADGGRPLYGVCLGQQAIAEAFGATVTHAESLMHGKTS
+VLTHTDHPMFAGVPARFTATRYHSLAAVRHTVDESVLEITAQTDDGVVMGLAHRTAPLWG
+VQFHPESVLTEGGYRMLGNWLESVGLVGAAERGGRLSPLVRAAD
+>3_1984
+MQSPQVSVLVVDNYDSFVYTLVGYLEQLGARTTVIRNDEVTPARALELAAEHTAVLISPG
+PGAPADAGVSLDLIRSAADGGRPLFGVCLGHQAIAEAFGATVTHAESLMHGKTSLVRHGE
+HPMFEGVPSPFTATRYHSLAAVRPTVDEAVLEITAETEDGVVMGLAHRTAPLWGVQFHPE
+SVLTEGGYRMLGNWLESVGLSGAAERGGRLSPLVRQD
+>4_15
+MQSPEVSVLVVDNYDSFVYTLVGYLEQLGARTTVIRNDEVTPARALELAAEHTAVLISPG
+PGAPADAGVSLDLIRSAADGGRPLFGVCLGHQAIAEAFGATVTHAESLMHGKTSLVRHGE
+HPMFEGVPSPFTATRYHSLAAVRPTVDEAVLEITAETEDGVVMGLAHRTAPLWGVQFHPE
+SVLTEGGYRMLGNWLGSVGLSGAAERGGRLSPLVRQD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000384.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000384.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e871c54f39a3461f46760a1aae19b1b9821985fd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000384.fa
@@ -0,0 +1,26 @@
+>0_372
+MARCTVERLMRAAGLRGISRAKGPRTTVPGRGPDERQDLVQRDFTAAAPNQLWVADITYC
+RTFSGWVYAAFIIDVFSRRVLGWQLSKSLRTDLALDTLEMAFWTRQRAGQDVAGLRHHSD
+KGVQYVAVRYTQRLAQAGAVASVGSTGDSYDNALAEAFNSLFKAELIRNKGPFKSIEDLE
+IAVAEYIDWFNHRRVHGEIRLVPPVEFEDVYHHENPVPAPAGTALTSL
+>2_316
+MHTCCRLLGVSRQGYYRYQKRPTSATELRRRWLTGLIREIHIASRGTYGYRRIHAELTMG
+MNIPCSSRLVWVLMTRAGIGGLPGPARIKRLKGVATADDLVNRKFHRLELNELWVTDITE
+HPTREGKVYCAAVLDACSRKIIGWAIDSKQDSTLVVNALDMAIRARQPDPGGIVHADHGV
+QFTSWVFTQKIRSAGLLPSFGTVGDGLDNAMMESFWSSMQIELLNRKKWKTRIELANAIF
+EYIEVFYNRHRRHSSLEYATPNDYDLARTPQALATTGS
+>2_639
+MLETPTALIVDYIDEHKHEFGVEPICATLSAAGTQIAPSTYYAAKTRPPSVRSLRDVQVL
+VEIRRVHEANYGVYGARKVHAQLRREGLQVARCTVERLMRAAGLRGISRAKGPRTTVPGR
+GPDERQDLVQRDFTAAAPNQLWVADITYCRTFSGWVYAAFIIDVFSRRVLGWQLSKSLRT
+DLALDALEMAFWTRQRAGQDVAGLRHHSDKGLQYVAVRYTQRLAQAGAVASVGSTGDSYD
+NALAEAFNSLFKAELIRNKGPFKSIEDLEIAVAEYIDWFNHRRVHGEIRLVPPVEFEDV
+>2_1185
+MQIGAWAQGGEIELANAIFEYLEVLYNRRRRHSCLECATPYDYDPAGTPRALTTTGS
+>2_1792
+MLETPTALIVDYIDEHKHEFGVEPICATLSAAGTQIAPSTYYAAKTRPPSVRSLRDVQVL
+VEIRRVHEANYGLYGARKVHAQLRREGLQVARCTVERLMRAAGLGGISRAKGPRTTVPGR
+GPDERQDLVQRDFTAAAPNQLWVADITYCRTFSGWVYAAFIIDVFSRRVLGWQLSKSLRT
+DLALDALEMAFWTRQRAGQDVAGLRHHSDKGVQYVAVRTPSGWPRPAQSPRSARRGILTI
+SVLAEAFNSLFKAELIRNKGPFTSIEDLAIAVAEYVDWFNHRRVHGEIRLVPPVEFEDVY
+HHENPAPAPAGTALTSL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000387.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000387.fa
new file mode 100644
index 0000000000000000000000000000000000000000..27e62339a48c42288a1e6639c250c032c1c7c4d6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000387.fa
@@ -0,0 +1,10 @@
+>0_398
+MGRLARVALVAGAAAAAYGARLWQQNREGKDIWATATDDLPEDAEGVEPAPED
+>1_7
+MGRLARVALVVSAAAAAYGARLWRENSARKDVWATATDDLPEDADGVEPAPED
+>2_351
+MRLARIATLVAGAAAAYGVRSWRQQREDKAVWASATDSLEPRKAPAEDGRGEDEETPQG
+>3_1963
+MGRLARVALVVSAAAAAYGARLWRENSAGKDVWATATDDLPEDADGVEPAPED
+>4_7
+MGRLARVALVVSAAAAAYGARLWRENSAGKDVWATATDDLPEDADGVEPAPED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000389.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000389.fa
new file mode 100644
index 0000000000000000000000000000000000000000..499aed06fdb2e3b5a9c4ebc10c20bfbf9e63f552
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000389.fa
@@ -0,0 +1,82 @@
+>0_400
+MSDETTPQTPDESAEVPETPETGQDVAVEQYVLPEGAADKVEPVDLESEMKRSYLDYAMA
+VIVGRALPDVRDGLKPVHRRVLYAMYDGGYRPDRSFNKSARVVGDVMGNYHPHGDTAIYD
+ALVRLIQDWVQRYPLALGQGNFGSPGNDGAAAQRYTETKMAPLAMEMVRDIDEDTVDMQD
+NYDGKQQEPAVLPARYPNLLVNGSSGIAVGMATNIPPHNMREVAAGVQWYLEHPEATREE
+LLEALLTRVHGPDFPTGAQILGRKGIEEVYRTGRGPITMRAVVNVEEIQGRTCLVVTELP
+YMTNPDNLAAKIAEMVRDGKINGIADMRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHT
+ELQSNFSANMLALVDGVPRTLSLDGFVHHWVKHQIDVIVRRTVFRKRKAEERAHILRGLL
+KALDMLDEVIATIRRSASADVAREALKELLDIDDVQAQAILQMQLRQLAALESQKIQDEY
+DELMARIAEYDRILESPQRQREVISEELGEIVAKHGDDRRTEIMAGYDGDMSMEDLIPEE
+EMVVSITRGGYVKRTRIDQYRSQGRGGKGVRGATLRGDDIVEHFLTVSTHHWLLFFTNFG
+RVYRIKTYELLEAGRDAKGQHVANLLAFQPDERIAQIQPLTGYDRAPYLVLATRNGLVKK
+TPLLDYDTNRTAGLIAIKLREGDELVSARVVSPDDDLILISHKGQSLRFTATDEALRPMG
+RATSGVTGMKFRDDDALLTMDVVEEDGYVFTVTDGGFAKRTHVDEYRLQNRGGLGIKVAK
+LVDDRGELAGGLVVREDQEVLVVMASGKVVRSAVAGVPAKGRDTMGVIFAKPDKRDRIVA
+VTLNNEHEMEAQADAEAAEDPVSEGSAAAAGVLPEGEPEALVGAEATAGAAADADVRLDA
+DIDPTDPAAAPEGLFEEDADGEGADGGEQ
+>1_5
+MSDETTPQTPDEPVEGAPTPQPPQTGLDIEVEHYVLPEGAADKVEPVDLESEMKRSYLDY
+AMAVIVGRALPDVRDGLKPVHRRVLYAMYDGGYRPDRAFNKSARVVGDVMGNYHPHGDTA
+IYDALVRLIQDWVQRYPLALGQGNFGSPGNDGAAAQRYTETKMAPLAMEMVRDIDEDTVD
+MQDNYDGKQQEPVVLPARYPNLLVNGSSGIAVGMATNIPPHNMREVAAGVQWYLEHPEAT
+REELLEALLARVHGPDFPTGAQILGRKGIEEVYRTGRGPITMRAVVNVEEIQGRTCLVVT
+ELPYMTNPDNLAAKIAEMVRDGKINGIADMRDETSGRTGQRLVIVLKRDAVAKVVLNNLY
+KHTELQSNFSANMLALVDGVPRTLSLDGFVHHWVKHQIDVIVRRTAFRKRKAEERAHILR
+GLLKALDMLDEVIATIRRSASAEVAREALKELLDIDDVQAQAILQMQLRQLAALESQKIQ
+DEYDDLMAKIAEYNRILESPQRQREVISEELAEIVAKHGDDRRTEIMAGFDGDMSIEDLI
+PEEEMVVSITRGGYVKRTRIDQYRSQARGGKGVRGATLRGDDVVEHFLTVSTHHWLLFFT
+NFGRVYRIKTYELLEAGRDAKGQHVANLLAFQPDERIAQIQPLVDYGRAPYLVLATRGGL
+VKKTPLLDYDTNRTAGLIAIKLREGDELVSARVVSPDDDLILISHKGQSLRFTATDEALR
+PMGRATSGVTGMKFRDDDSLLTMDVVEEDGYVFTVTDGGFAKRTHVDEYRPQNRGGLGIK
+VAKLVDDRGELAGGLVVREDQEVLVVMASGKVVRSAVAGVPAKGRDTMGVIFAKPDKRDR
+IVAVTLNNEQEMEAKADAEAEAGPDVPLDADIDPTDPVAAPEDALTQDAGEGADGGEQ
+>2_353
+MSDETTPGTAPGTPQDGHDADQTPQIGQDVAVEHYVLPEGAADKVEPVDLESEMKRSYLD
+YAMAVIVGRALPDVRDGLKPVHRRVLYAMYDGGYRPDRSFNKSARVVGEVMGNYHPHGDT
+AIYDALVRLIQDWVQRYPLALGQGNFGSPGNDGAAAQRYTETKMAPLAMEMVRDIDEDTV
+DMQENYDGKQLEPTVLPARFPNLLVNGSSGIAVGMATNIPPHNMREVAAGVQWYLEHPEA
+TREELLAALMQRIKGPDFPTGAQILGRKGIEEVYRTGRGPITMRAVVNVEEIQGRTCLVV
+TELPYMTNPDNLAAKIAEMVRDGKIAGIADMRDETSGRTGQRLVIVLKRDAVAKVVLNNL
+YKHTELQSNFSANMLALVDGVPRTLSLDGFVHHWVKHQIEVIVRRTAFRKKKAEARAHIL
+QGLLKALDMLDEVIATIRRSASAEVAREALKTLLDIDDEQAQAILQMQLRQLAALESQKI
+QDEYDELMARIAEYTAILESPQRQREVVSDELGELVAKHGDERRTEIVAGFDGDMSIEDL
+IPEEEMVVTITRGGYVKRTRIDQYRSQARGGKGVRGAALRGDDVVEHFLTVSTHHWLLFF
+TNLGRVYRIKTYELQEAGRDAKGQHVANLLAFQPDERIAQIQPLAGYDGDAPYLVLATRN
+GLVKKTPLEDYDTNRQAGLIAIKLREGDELVSARVVSAQDDLLLISRQGQSVRFTATDEA
+LRPMGRATSGVTGMKFRGDDALLAMDVIRAGDEDSYVFTVTDGGFAKRTHVDEYRTQGRG
+GLGIKVARLVDDRGELAGGLVVGEDQEVLVVMASGKVVRSAVAGVPAKGRDTMGVVFAKP
+DKRDRIVAVTLNNEDEIEATADERAAAEGAAPEAAGAADGAGVPLDAVNDQTDPAAAAEA
+EAAGEDADGGEQ
+>3_1961
+MSDETTPQTPDEPVEGAPTPQTGLDIEVEHYVLPEGAADKVEPVDLESEMKRSYLDYAMA
+VIVGRALPDVRDGLKPVHRRVLYAMYDGGYRPDRAFNKSARVVGDVMGNYHPHGDTAIYD
+ALVRLIQDWVQRYPLALGQGNFGSPGNDGAAAQRYTETKMAPLAMEMVRDIDEDTVDMQD
+NYDGKQQEPVVLPARYPNLLVNGSSGIAVGMATNIPPHNMREVAAGVQWYLEHPEATREE
+LLEALLARVHGPDFPTGAQILGRKGIEEVYRTGRGPITMRAVVNVEEIQGRTCLVVTELP
+YMTNPDNLAAKIAEMVRDGKINGIADMRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHT
+ELQSNFSANMLALVDGVPRTLSLDGFVHHWVKHQIDVIVRRTAFRKRKAEERAHILRGLL
+KALDMLDEVIATIRRSASADVAREALKELLDIDDVQAQAILQMQLRQLAALESQKIQDEY
+DDLMAKIAEYNRILESPQRQREVISEELAEIVAKHGDDRRTEIMAGFDGDMSIEDLIPEE
+EMVVSITRGGYVKRTRIDQYRSQARGGKGVRGATLRGDDVVEHFLTVSTHHWLLFFTNFG
+RVYRIKTYELLEAGRDAKGQHVANLLAFQPDERIAQIQPLVDYGRAPYLVLATRGGLVKK
+TPLLDYDTNRTAGLIAIKLREGDELVSARVVSPDDDLILISRKGQSLRFTATDEALRPMG
+RATSGVTGMKFRDDDSLLTMDVVEEDGYVFTVTDGGFAKRTHVDEYRLQNRGGLGIKVAK
+LVDDRGELAGGLVVREDQEVLVVMASGKVVRSAVAGVPAKGRDTMGVIFAKPDKRDRIVA
+VTLNNEQEMEAKADAEAEAGPDVPLDADIDPTDPVAAPEDALTQDAGEGADGGEQ
+>4_5
+MSDETTPQTPDEPVEGAPTPQTGLDIEVEHYVLPEGAADKVEPVDLESEMKRSYLDYAMA
+VIVGRALPDVRDGLKPVHRRVLYAMYDGGYRPDRAFNKSARVVGDVMGNYHPHGDTAIYD
+ALVRLIQDWVQRYPLALGQGNFGSPGNDGAAAQRYTETKMAPLAMEMVRDIDEDTVDMQD
+NYDGKQQEPVVLPARYPNLLVNGSSGIAVGMATNIPPHNMREVAAGVQWYLEHPEATREE
+LLEALLARVHGPDFPTGAQILGRKGIEEVYRTGRGPITMRAVVNVEEIQGRTCLVVTELP
+YMTNPDNLAAKIAEMVRDGKINGIADMRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHT
+ELQSNFSANMLALVDGVPRTLSLDGFVHHWVKHQIDVIVRRTAFRKRKAEERAHILRGLL
+KALDMLDEVIATIRRSASADVAREALKELLDIDDVQAQAILQMQLRQLAALESQKIQDEY
+DDLMAKIAEYNRILESPQRQREVISEELAEIVAKHGDDRRTEIMAGFDGDMSIEDLIPEE
+EMVVSITRGGYVKRTRIDQYRSQARGGKGVRGATLRGDDVVEHFLTVSTHHWLLFFTNFG
+RVYRIKTYELLEAGRDAKGQHVANLLAFQPDERIAQIQPLVDYGRAPYLVLATRGGLVKK
+TPLLDYDTNRTAGLIAIKLREGDELVSARVVSPDDDLILISHKGQSLRFTATDEALRPMG
+RATSGVTGMKFRDDDSLLTMDVVEEDGYVFTVTDGGFAKRTHVDEYRLQNRGGLGIKVAK
+LVDDRGELAGGLVVREDQEVLVVMASGKVVRSAVAGVPAKGRDTMGVIFAKPDKRDRIVA
+VTLNNEQEMEAKADAEAEAGPDVPLDADIDPTDPVAAPEDALTQDAGEGADGGEQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000397.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000397.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4e25b12e9c243a83174346b61c45470ba4ea4909
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000397.fa
@@ -0,0 +1,20 @@
+>0_408
+MAVTPSPFTVLEPSREWGPVRALPSALLAGLLTVYRAVVSPLYGQVCRFFPSCSAYGLEA
+VHVHGAVKGSWLAARRIGRCHPWNDGGVDPVPPGHRRWPPGRQPRILTLNHPPIPPDLPQ
+ED
+>1_2249
+MTVTPSPFVVLEPSREWGPLRALPSALLAGLLTVYRAVVSPLYGPVCRFFPSCSAYGLEA
+VHVHGAVKGSWLAARRIGRCHPWNDGGVDPVPPGHRRWPPGRQPRILTLNHPPIPPDLPQ
+ED
+>2_362
+MPASSPYTVLEPSHEWGPLRALPSTLLAWLLTAYRAVVSPLYGPVCRFFPSCSAYGLEAV
+HVHGAVRGSWLTARRLLRCHPWNDGGVDPVPPGRRRWPPGREPRIFALNHPPIPPDPSQE
+D
+>3_1953
+MTVTPSPFVVLEPSREWGPLRALPSALLAGLLTVYRAVVSPLYGPVCRFFPSCSAYGLEA
+VHVHGAVKGSWLAARRIGRCHPWNDGGVDPVPPGHRRWPPGRQPRILTLNHPPIPPDLPQ
+ED
+>4_2191
+MTVTPSPFVVLEPSREWGPLRALPSALLAGLLTVYRAVVSPLYGPVCRFFPSCSAYGLEA
+VHVHGAVKGSWLAARRIGRCHPWNDGGVDPVPPGHRRWPPGRQPRILALNHPPIPPDLPQ
+ED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000402.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000402.fa
new file mode 100644
index 0000000000000000000000000000000000000000..43f31b4d678737252066aa420fae734abc449766
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000402.fa
@@ -0,0 +1,15 @@
+>0_415
+MSTINVTDTDFDQKVLQSELPVLVDFWAEWCGPCRMLGPVLDEMAVEHEGKAVIAKLNVD
+ENPATAARFGVTSIPLVLGFQGGEKVAESVGAKPKAALEKEFSALLG
+>1_2243
+MSTITVTDADFDQKVLQSELPVLVDFWAEWCGPCRMLGPVLEDMAVEHEGKAVIAKLNVD
+ENPAIAARYGVTSIPLVVGFQNGEKVAESVGAKPKAALEKEFSALLG
+>2_368
+MSTINVTDADFQAKVLDSELPVLVDFWAEWCGPCRMLGPVLDELAAEHEGEVLVAKLNVD
+ENPASAARYGVTSIPLVLGFQGGEKVAESVGAKPKAQLEKEFAALLG
+>3_1947
+MSTITVTDADFDQKVLQSELPVLVDFWAEWCGPCRMLGPVLEDMAVEHEGKAVIAKLNVD
+ENPAIAARYGVTSIPLVVGFQNGEKVAESVGAKPKAALEKEFSALLG
+>4_2185
+MSTITVTDADFDQKVLQSELPVLVDFWAEWCGPCRMLGPVLEDMAVEHEGKAVIAKLNVD
+ENPAIAARYGVTSIPLVVGFQNGEKVAESVGAKPKAALEKEFSALLG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000404.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000404.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6eaefd71ebbcad26766ef33434828f35d260ed10
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000404.fa
@@ -0,0 +1,60 @@
+>0_418
+MASPDPSAHRGAPLPSALGAWHRRPQPPARPEPAPAPGPRPAASGLPTVEEVSAGGVVVR
+EHDGGLEVAIIARYNRGGRLEWCLPKGHPEGVEDHRQAAVREVEEETGIAGDILEPLGAI
+DYWFTVSRHRVHKTVHHFLLRATGGELTTENDPDHEAVDVAWVRLEDVARRLSFANERRI
+VDLARQVVDRHFPRAPPGAPAPDPPPRTRGSSDHDWVTLEQQPLPAPRAGTPPAPAVADE
+EPTTADPAPATDPEAPAREDRPDETPEGERRAGRSTAIMASGTLISRVLGLVRAMLVTVA
+IGLSTDMADIFEIANSLPNVIYLLLVGGVFNVVLVPQLIKHARDADRGADYTSRLMTLGT
+LVMLGGTLVVMAVAAPLMTALTRGWSPEKLEMATVFALWCLPQVFFYGMYALVGQVLNAN
+GRFGAYMWAPVLNNVVAIAAIGLYLAMFGAYRAGEDVAGWTSTQTLVLAGGHTLGVILQA
+VILFLPLRGLGLGMRPRFGWKGIGLRETGRIAGYTLVTMMVTNVVLLLCQRYVTSATEAR
+DRGELRIPGTEAWSTEMAQAAIPGVAAYNMAMLIAVLPHSVFVLSLATVLFNRLARAMTR
+QDMPAVRRTTAQGLRAFTVPLMFSLAGIVVLAGPLGRVFGSTAETSMVAGIAVGAVLLAL
+ALSIPFRSGSFYLLRVFYAAEDAKVPMVVQVSSSLLMLLLSWAGAMLLPLWSMALWVAIA
+SSVSYVYQFALTHVLTVRRFGDYGFASVLRAHGQTGLAALAAAAAGAVVVWLLGGYTGGF
+AWETIVTALITCAVAAAVMAPVYVVTLKLLRFPELDDALRPVVSRVPALGRLLRVG
+>1_2240
+MDPADETPEGERRAGRSTAIMASGTLLSRVLGLVRATLVTVAIGLSADMADIFEIANSLP
+NVIYLLLVGGVFNVVLVPQLIKHARDADRGADYTSRLMTLGTLVMLAGTVVVMLAAAPLM
+TALTRGWSPEKLEMATVFALWCLPQVFFYGMYALVGQVLNANGRFGAYMWAPVLNNVVAI
+GAIVLYLGMFGAYRAGDDLAGWTSAQTVVLAGGHTLGVVLQAVILFLPLRGLGLGLRPRF
+GWKGIGLRDTGRIAGYTLITMVATNVVLLLCQRYVTSATEARDRGELRIPGTETWSAEMA
+QAAIPGVAAYNMAMLMAVLPHSVFVLSLATVLFNRLARAMGRQDMSAVRRTTAQGLRAFT
+VPLMFCLAGVVVLAGPLGRVFGSTAETAMVAGVAVGSVLLALALSIPFRSGSFYLLRVFY
+AAEDAKVPMVVQVSGSLLMLLLSWAGAMLLPLWSMALWVAVASSVSYVYQFVLTHVLTVR
+RFGDYGLASVLRAHVQTGLAALAAAAAGAVVVWLLGGYTGGFAWNSIGTALLTCAVAAVA
+MGPVYLMVLRAMRFPELDDALRPLVARVPALGRLLRVG
+>2_371
+MSSRTAPRRALPADDAPRPKEVEDVVLPASDPEAPAQAQEEVPEGERRAGRSTAIMAAGT
+MISRVLGFVRAALLTIAIGTTVGTVADIFEVANSLPNVIYLLLVGGVFNVVLVPQLIKHA
+KDADRGADYTSRLMTLAVLVMLAATVLVTAAAAPLMAALTRGWSPEMLQLGTVFALWCLP
+QMFFYGMYALVGQILNANGRFGAYMWAPVLNNVVAIAAIGLYLVMFGRYSGGDLLGRWTP
+EQTLVLAGGHTLGVILQALILFLPLRGLGLGLRPRFGWRGMGLRHTGRIAGYTLFTMAAS
+NIVLLLSHRYINGASAAREDPSVRVPGTEGWDPAMADALIPGLTAYNQAMLISVLPHSVF
+VLSLATVLFNKLARSMAAGDHAAVRETTARGLRTFAAPIMFSLAGVVVLAGPLGRLFGST
+AESAQVTGMAVGAVILLMSLSMPFRSGSFYLLRVFYAAESARIPMVVQVTTSLLTLAVTA
+AGAYLLPLWAITYWAALASVVSHAFQFFFAHVLAVRRFGDYGFTHVLAAYATTGAAGVVA
+GAAGAVVAWLLGAYSGGWAWGSILSALVTCAVVGLVMAPVYVVALRVLRFPELASAAAPL
+ARRVPALGRLLGAR
+>3_1944
+MDPADETPEGERRAGRSTAIMASGTLLSRVLGLVRATLVTVAIGLSADMADIFEIANSLP
+NVIYLLLVGGVFNVVLVPQLIKHARDADRGADYTSRLMTLGTLVMLAGTVVVMLAAAPLM
+TALTRGWSPEKLEMATVFALWCLPQVFFYGMYALVGQVLNANGRFGAYMWAPVLNNVVAI
+GAIVLYLGMFGAYRAGDDLAGWTSAQTVVLAGGHTLGVVLQAVILFLPLRGLGLGLRPRF
+GWKGIGLRDTGRIAGYTLITMVATNVVLLLCQRYVTSATEARDRGELRIPGTETWSAEMA
+QAAIPGVAAYNMAMLMAVLPHSVFVLSLATVLFNRLARAMGRQDMSAVRRTTAQGLRAFT
+VPLMFCLAGVVVLAGPLGRVFGSTAETAMVAGVAVGSVLLALALSIPFRSGSFYLLRVFY
+AAEDAKVPMVVQVSGSLLMLLLSWAGAMLLPLWSMALWVAVASSVSYVYQFVLTHVLTVR
+RFGDYGLASVLRAHVQTGLAALAAAAAGVVVVWLLGGYTGGFAWNSIGTALLTCAVAAVA
+MGPVYLMVLRAMRFPELDDALRPLVARVPALGRLLRVG
+>4_2182
+MDPADETPEGERRAGRSTAIMASGTLLSRVLGLVRATLVTVAIGLSADMADIFEIANSLP
+NVIYLLLVGGVFNVVLVPQLIKHARDADRGADYTSRLMTLGTLVMLAGTVVVMLAAAPLM
+TALTRGWSPEKLEMATVFALWCLPQVFFYGMYALVGQVLNANGRFGAYMWAPVLNNVVAI
+GAIVLYLGMFGAYRAGDDLAGWTTAQTVVLAGGHTLGVVLQAVILFLPLRGLGLGLRPRF
+GWKGIGLRDTGRIAGYTLVTMVATNVVLLLCQRYVTSATEARDRGELRIPGTETWSAEMA
+QAAIPGVAAYNMAMLMAVLPHSVFVLSLATVLFNRLARAMGRQDMSAVRRTTAQGLRAFT
+VPLMFCLAGVVVLAGPLGRVFGSTAETAMVAGIAVGSVLLALALSIPFRSGSFYLLRVFY
+AAEDAKVPMVVQVSGSLLMLLLSWAGAMLLPLWSMALWVAFASSVSYVYQFVLTHVLTVR
+RFGDYGLASVLRAHVQTGLAALAAAAAGAVVVWLLGGYTGGFAWNSIGTALLTCAAAAVA
+MGPVYLVVLRAMRFPELDDALRPLVARVPALGRLLRVG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000407.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000407.fa
new file mode 100644
index 0000000000000000000000000000000000000000..11d8d18daba6d412f31d377381ed3e1b0c1baef2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000407.fa
@@ -0,0 +1,51 @@
+>0_423
+MRPAPAHAATPSEPPTHAVDGPSWAGPDGRAEAGGSAVSAPPSRGPAAVPAPVPAPGDRG
+GRFQLPGGLAANRFTLGGRGGTGSWASPAALAGVLVALAAVVTVLQKAPCLLHGWGAPNV
+YYAGCYSDWAALYGGRGFAADPWAPFQAGSTFEYPVLMSLVGSVGAQLTQWLPFGAEHGT
+LVFWLVNLLFVVGLWAAVAVLTVRMAGRRWSDGLMVAVAPGVILAGTINWDLWAVALLAL
+GMYAWARERPLAAGVLIGLGAAMKIYPLLILGPLLILAVRSRRWRPFLLAAGGAVAAWAA
+VNVPLMVANFEAWSVFFTFSGERGPGLSSVWHAWDVTAAQAGWAFVPEDSLTLLAYGAFA
+VCCLGIFVLGVRVRHTPRLAQLTFLVVAAFVLTNKVYSPQFVIWLIPLVALALPRWRDFW
+AWQTVEALHFFAVWMYLAKGASGSMPQHSMDDSVYVAAILAHMLAVLWLCGRVVWEMLHP
+EDDLVRRDHTDLPGGDPLAGAYRSAQA
+>1_2234
+MRPAPAHAATPSEPPTHAADGAPSDAVTAPGAPAGRSADSAPSGTLPAPGERGGRFQLAG
+GLAANGPGRGTGSWAGPVALTGLLVALAAVVTVLQKSPCLLHGWGAPDVYYAGCYSDWAA
+LYGGRGFAADPWAPFRAGSTFEYPVLMSVVGSVAAWITQALPFSPEQGTVVFWLVNLGFV
+VVLWAVVAVLTVRMAGRRWTDGLMVAVAPGIVLAGTINWDLWAVALLACGMYAWSRGRSL
+TAGVLFGLGAAMKLYPLLILGPLLILAVRSRRWRPFLLAAGGTVAAWAAVNVPLMAVNFQ
+AWSVFFTFSGERGPGLSSVWHAWDVTAAQAGWAFVPEDSLTLLAYGTFAVCCLGIFVLGV
+RVRHTPRLAQLTFLVVAAFVLTNKVYSPQFVVWLIPLLALALPRWRDFWVWQTVEALHFF
+AVWMYLAKGVAETPPQHSMDDSVYVAAILAHILAVLWLCGRVVWEMLHPAEDLVKRDHGG
+HPDADPLAGAYAGPARGRSGRPAAVQA
+>2_377
+MSSSPAPGAAPDDPPAPAPQARPDVPVGAHRAPRHALTTPPPGSAEGAPSAGSGAVESDE
+ATPEGEVDPRVVPAPGDRGGRFAIPGGLAANGRGRGTGAWAGPVALTALLVALGAIATVL
+QKSPCLLHGWGAPNVYYAGCYSDWAALYGGRGFAADPWAPFQAGSTFEYPVLMSLVASVG
+AQLTQWLPFPASVGTVVFWCVNLLFVVGLWAATAVLTVRTAGRRWTDGLMVAVAPGIILA
+GTVNWDLWAVALMAWGMWVWLRGRPGWAGVLFGLGAATKLYPLLILGPLLILAVRSRRFG
+PFLKATGGAVAAWLAVNLPLMLTHFESWKVFFTFSAERGPGLSSVWHAWDVVAAQAGWAA
+VPDERLGMYAYGAFAVCCLGIFVLGVVAKRPPRLAQLTFLVVAAFVLTNKVYSPQFVIWL
+IPLMALALPRWKDFWVWQTVEALHFFAVWMYLAKGASGSMPQHSMDDSVYVAAILAHMLA
+VLWLCARVVLEILDPDDDLVRGPGGDPARDPEDPSAGPADPGMTGVRPVREAVAAGVGAA
+SAQA
+>3_1938
+MRPAPAHAATPSEPPTHAADGAPCDAVADPGAPAGRSADSAPSGALPAPGERGGRFQLAG
+GLAANGPGRGTGSWAGPVALTGLLVALAAVVTVLQKSPCLLHGWGAPDVYYAGCYSDWAA
+LYGGRGFAADPWAPFRAGSTFEYPVLMSVVGSVAAWITQALPFSPEQGTVVFWLVNLGFV
+VVLWAVVAVLTVRMAGRRWTDGLMVAVAPGIVLAGTINWDLWAVALLACGMYAWSRGRSL
+TAGVLFGLGAAMKLYPLLILGPLLILAVRSRRWRPFLLAAGGTVAAWAAVNVPLMAVNFQ
+AWSVFFTFSGERGPGLSSVWHAWDVTAAQAGWAFVPEDSLTLLAYGTFAVCCLGIFVLGV
+RVRHTPRLAQLTFLVVAAFVLTNKVYSPQFVVWLIPLLALALPRWRDFWVWQTVEALHFF
+AVWMYLAKGVAETPPQHSMDDSVYVAAILAHMLAVLWLCGRVVWEMLHPAEDLVKRDHGG
+HPDADPLAGAYAGPARGRSGRPAAVQA
+>4_2176
+MRPAPAHAATPSEPPTHAADGAPCDAVADPGAPAGRSADSAPSGTLPAPGERGGRFQLAG
+GLAANGPGRGTGSWAGPAALTGLLVALAAVVTVLQKSPCLLHGWGAPDVYYAGCYSDWAA
+LYGGRGFAADPWAPFRAGSTFEYPVLMSVVGSVAAWITQALPFSPEQGTVVFWLVNLGFV
+VVLWAVVAVLTVRMAGRRWTDGLMVAVAPGIVLAGTINWDLWAVALLACGMYAWSRGRSL
+TAGMLFGLGAAMKLYPLLILGPLLILAVRSRRWRPFLLAAGGTVAAWAAVNVPLMAVNFQ
+AWSVFFTFSGERGPGLSSVWHAWDVTAAQAGWAFVPEDSLTLLAYGTFAVCCLGIFVLGV
+RVRHTPRLAQLTFLVVAAFVLTNKVYSPQFVVWLIPLLALALPRWRDFWVWQTVEALHFF
+AVWMYLAKGVAETPPQHSMDDSVYVAAILAHMLAVLWLCGRVVWEMLHPAEDLVKRDHGG
+HPDTDPLAGAYAGPARGRSGRPAAVQA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000413.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000413.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f9758302bfde55bdb6c0c84377afc67d4918e2de
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000413.fa
@@ -0,0 +1,25 @@
+>0_429
+MAGETVITVVGNLTADPELRFTPNGAAVANFTVASTPRTFDRQTNEWKDGEALFLRCSVW
+REAAENVAESLTKGMRVIVQGRLKARSYDDRDGNRRTSWELDVDEVGPALKFATAKVTRA
+QRSGGGGGGGFGGGQQGGGFGGAPAGGGFGGNNDGGFGGAPQGGGWGGQQQGGGQAAPQD
+PWSGGGGGGGWDTPSSNEPPF
+>1_2230
+MAGETVITVVGNLTADPELRFTPNGAAVANFTVASTPRTFDRQTNEWKDGEALFLRCSVW
+REAAENVAESLTKGMRVIVQGRLRARSYDDRDGNRRTSWELDVDEVGPALRFATAKVTRA
+QRGGGGGGGFGGGQQGGGFGGAPAGGGFGGNSDGGFGGAQQGGGWGGQQQGGGQAAPQDP
+WSGGGGGGWDTPSSNEPPF
+>2_382
+MAGETVITVVGNLTADPELRFTPNGAAVANFTVASTPRTFDRQTNEWKDEEALFVRCSVW
+REAAENVAESLTKGMRVIVQGRLKANSYQDREGNKRTSWELQVDEVGPALKFATAKVTRS
+QRGGGGGGGFGGGQQGGGFGGSPQGGGGFGGGQQQSGGWGQPSGGGQSAPAQDPWSGSGG
+GGWDTPSNGEPPF
+>3_1933
+MAGETVITVVGNLTADPELRFTPNGAAVANFTVASTPRTFDRQTNEWKDGEALFLRCSVW
+REAAENVAESLTKGMRVIVQGRLRARSYDDRDGNRRTSWELDVDEVGPALRFATAKVTRA
+QRGGGGGGGFGGGQQGGGFGGAPAGGGFGGNNDGGFGGAQQGGGWGGQQQGGGQAAPQDP
+WSGGGGGGWDTPSSNEPPF
+>4_2171
+MAGETVITVVGNLTADPELRFTPNGAAVANFTVASTPRTFDRQTNEWKDGEALFLRCSVW
+REAAENVAESLTKGMRVIVQGRLRARSYDDRDGNRRTSWELDVDEVGPALRFATAKVTRA
+QRGGGGGGGFGGGQQGGGVGGAPAGGGFGGNNDGGFGGAQQGGGWGGQQQGGGQAAPQDP
+WSGGGGGGWDTPSSNEPPF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000419.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000419.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c4024b87c6c5352486afe4d0ea9b3381286248bd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000419.fa
@@ -0,0 +1,45 @@
+>0_436
+MTEDYGDSGSYDGGRSSERFLPPQDLEAERSVLGGMMLSKDAIADVVELLRGHDFYRPSH
+EMIYEAIIDLYGRGEPADAVTVADLLNKRQELSRVGGPAVLHELIQTVPTAANASFYAEI
+VAEKAVLRRLVTAGTKITQLGYQGDGEVEEIVNEAQSEIYKVAENRQSEDYVRLSEIMEH
+AVDEIEAAGNQGEGLTGVPTDFYDFDELTQGLHGGQMIVIAARPAVGKSTLAIDFARAAA
+IHHNMATVFFSLEMGKNEIAMRLLSAEATIALQDLRKGTIRDDQWSKIAATVGRLNEAPF
+FIDDSPNMTMMEIRAKCRRLKQKNNLKMVVLDYLQLMSSGKKVESRQQEVAEFSRALKLL
+AKELDVPVIALSQLNRGSEQRTDKRPQVSDLRESGSIEQDADMVILLHREDVYDKESPRA
+GEADLIVAKHRNGPTKTIVVGFQGHYSRFSNLASDAGGGPGGF
+>1_2221
+MTENYGDSGSYDGGRSSERFLPPQDLEAERSVLGGMMLSKDAIADVVELLRGHDFYRPSH
+EMIYEAIIDLYGRGEPADAVTVADLLNKRQELSRVGGPAVLHELIQSVPTAANASFYAEI
+VAEKAVLRRLVTAGTKITQLGYQGDGEVEEIVNEAQSEIYKVAENRQSEDYVRLAEIMEH
+AVDEIEAAGNQGEGLTGVPTDFYDFDELTQGLHGGQMIVIAARPAVGKSTLALDFARAAA
+IHHNMATVFFSLEMGKNEIAMRLLSAEATIALQDLRKGTIRDDQWSKIAATVGRLNEAPF
+FIDDSPNMTMMEIRAKCRRLKQKNNLKMVVLDYLQLMSSGKKVESRQQEVAEFSRALKLL
+AKELDVPVIALSQLNRGSEQRTDKRPQVSDLRESGSIEQDADMVILLHREDVYDKESPRA
+GEADLIVAKHRNGPTKTIVVGFQGHYSRFSNLAQDGGGGGGF
+>2_389
+MTEDYGDSGSYGGDRTPERFLPPQDLEAERSVLGGMMLSKDAIADVVELLRGHDFYRPSH
+EMIYEAIIDLYGRGEPADAVTVADLLNKRQELTKVGGPAVLHELIQTVPTAANASFYAEI
+VAEKAVLRRLVSAGTKITQLGYQGDGEVEEIVNEAQSEIYKVAENRQSEDYVRLAEIMEH
+AVDEIEAAGNQGEGLTGVPTDFYDFDELTQGLHGGQMIVIAARPAVGKSTLALDFARAAA
+IHHNMATVFFSLEMGKNEIAMRLLSAEATIALQDLRKGTIRDDQWSKIAATVGRLNEAPF
+FIDDSPNMTMMEIRAKCRRLKQKNNLKMVVLDYLQLMSSGKKVESRQQEVAEFSRALKLL
+AKELDVPVIALSQLNRGSEQRTDKRPQVSDLRESGSIEQDADMVILLHREDVYDKESPRA
+GEADLIVAKHRNGPTKTIVVGFQGHYSRFSNLAQDGGGSGGF
+>3_1923
+MTENYGDSGSYDGGRSSERFLPPQDLEAERSVLGGMMLSKDAIADVVELLRGHDFYRPSH
+EMIYEAIIDLYGRGEPADAVTVADLLNKRQELSRVGGPAVLHELIQSVPTAANASFYAEI
+VAEKAVLRRLVTAGTKITQLGYQGDGEVEEIVNEAQSEIYKVAENRQSEDYVRLAEIMEH
+AVDEIEAAGNQGEGLTGVPTDFYDFDELTQGLHGGQMIVIAARPAVGKSTLALDFARAAA
+IHHNMATVFFSLEMGKNEIAMRLLSAEATIALQDLRKGTIRDDQWSKIAATVGRLNEAPF
+FIDDSPNMTMMEIRAKCRRLKQKNNLKMVVLDYLQLMSSGKKVESRQQEVAEFSRALKLL
+AKELDVPVIALSQLNRGSEQRTDKRPQVSDLRESGSIEQDADMVILLHREDVYDKESPRA
+GEADLIVAKHRNGPTKTIVVGFQGHYSRFSNLAQDGGGSGGF
+>4_2161
+MTENYGDSGSYDGGRSSERFLPPQDLEAERSVLGGMMLSKDAIADVVELLRGHDFYRPSH
+EMIYEAIIDLYGRGEPADAVTVADLLNKRQELSRVGGPAVLHELIQSVPTAANASFYAEI
+VAEKAVLRRLVTAGTKITQLGYQGDGEVEEIVNEAQSEIYKVAENRQSEDYVRLAEIMEH
+AVDEIEAAGNQGEGLTGVPTDFYDFDELTQGLHGGQMIVIAARPAVGKSTLALDFARAAA
+IHHNMATVFFSLEMGKNEIAMRLLSAEATIALQDLRKGTIRDDQWSKIAATVGRLNEAPF
+FIDDSPNMTMMEIRAKCRRLKQKNNLKMVVLDYLQLMSSGKKVESRQQEVAEFSRALKLL
+AKELDVPVIALSQLNRGSEQRTDKRPQVSDLRESGSIEQDADMVILLHREDVYDKESPRA
+GEADLIVAKHRNGPTKTIVVGFQGHYSRFSNLASDAGGAGGF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000421.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000421.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c17971d9c77440e5af171244bd476e9893097dba
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000421.fa
@@ -0,0 +1,55 @@
+>0_444
+MGGGSTGVGAAFDAATRGLDVGIVEARDWASGTSSRSSRLMHGGLRYLEMLDVKLVYEAL
+RERDLLLTQTAPHLVRPLRFVFPFFHKVIDRGFIGAGVTMYDAMQSLGRRRAMSAHRHLS
+RRSMAATFPSLDDEKIVGAVEYADAQFDDARLAMMLVRSAVDHGAVAANYTAVTGYLRGD
+DGRVQGVRVREETSGEEFDVHARAVILAGGVWTQEQQELAEADGGLEVLASKGAHITVPR
+DRIRADAATGVITKTEKSVLFLIPWDEYWVIGTTDTPWAEDVAHPAATADDIDYILEHAN
+AVLKEDLTRDDVIATYAGLRPLLQPVTGSDGGSTKISREHTVTEVAPGLTAVAGGKWTTY
+RAMAEDVVDFVVRETHPTRPSLTERIPVLGGLGYSEIEAEADRIAADYGLDEARVDRLLF
+RYGTVLRHVLDLIDADPSLSVPLAEAPRYLRAEIVHAARAEGVVHLDDVIERRTRLSTEV
+RDRGVAAAEEIASLVAPELGWDEERIAGEIRAYKSLVAARLRGETAHDDVTAAAALAAAD
+AASTH
+>1_2207
+MPTLRTVPLSAATREDHLARLRATSPEAPLDILVVGGGSTGVGAAFDAATRGLDVGIVEA
+RDWASGTSSRSSRLMHGGLRYLEMLDVKLVYEALRERDLLLTQTAPHLVRPLRFVFPFFH
+KVIDRGFIGAGVTMYDAMQSLGRRRAMGAHRHLSRRSMAATFPSLDDEKIVGAVEYADAQ
+FDDARLAMMLVRSAVDHGAVAANYTAVTGYLRGDDGRVQGVRVREETSGEEFDVHARAVI
+LAGGVWTQEQQELAGADGGLEVLASKGAHITVPRDRIRADAATGVITKTEKSVLFLIPWD
+EYWVIGTTDTPWAEDVAHPATTADDIDYILEHANAVLKEDLTRDDVVATYAGLRPLLQPV
+TGSDGGSTKISREHTVTEVAPGLTAVAGGKWTTYRAMAEDVVDFVVRETHPTRPSLTERI
+PVLGGLGYSEIEAEADRIAADYGLDEARVDRLLFRYGTVLRHVLDLIDADPSLSVPLAEA
+PRYLRAEIVYAARAEGVVHLDDVIERRTRLSTEVRDRGVAAAEEIASLVAPELGWDEERI
+AGEIRAYKNLVAARLRGETAHDDVTAAAALAAADADAAPTP
+>2_476
+MPTLRTVELSPATRADHLARLRAADADHPLDVLVVGGGSAGVGAAFDAATRGLDVGIVDA
+GDWAGGTSSRSSRLMHGGLRYLEMLDVKLVYEALRERDLLLTRTAPHVVRPLRFVFPLEH
+ARDRGWIGAGVGVYDAMQSVGRRRAVGGHRHLGRKALAETFPGLDPEAAVGAVEYADAQF
+DDARLALLLVRSAVDLGAAALNHAPVVGYLKDGAGAVVGARVRESLTGEELQVHARAVIL
+AGGVWTQEQQELAGVDGGLEVLASKGVHVTVPRERIAAEPGVGVITRTEKSVLFVIPSDE
+HWIIGTTDTPWRQDVDHPAATAADVDYVLEHANAVLSEDLTRADVVAVYAGLRPLLQPAA
+GADDASTKVSREHTVTELAPGLTAVAGGKWTTYRAMAEDTVDFAVRDLFPTRPSLTAHTP
+VLGGLGYAEIAARAAEIAAERGFDAARVDRLLRRYGTLLPHVLALVDADPALGEPLPGGE
+AYLRAEVVYAARAEGAVHLDDVLERRLRLSTEVPDRGADAASEAAALVADVLGWDAARRD
+AEVAAYRALVAARRRAEGLDDDAAAAAELAAAGERAGVVPVTSRETVTPEEKGGAR
+>3_1911
+MPTLRTVSLSAATREDHLARLRATSPEAPLDILIVGGGSTGVGAAFDAATRGLDVGIVEA
+RDWASGTSSRSSRLMHGGLRYLEMLDVKLVYEALRERDLLLTQTAPHLVRPLRFVFPFFH
+KVIDRGFIGAGVTMYDAMQSLGRRRAMGAHRHLSRRSMAATFPSLDDEKIVGAVEYADAQ
+FDDARLAMMLVRSAVDHGAVAANYTAVTGYLRGDDGRVQGVRVREETSGEEFDVHARAVI
+LAGGVWTQEQQELAGADGGLEVLASKGAHITVPRDRIRADAATGVITKTEKSVLFLIPWD
+EYWVIGTTDTPWAEDVAHPATTADDIDYILEHANAVLKEDLTRDDVIATYAGLRPLLQPV
+TGSDGGSTKISREHTVTEVAPGLTAVAGGKWTTYRAMAEDVVDFVVRETHPTRPSLTEHI
+PVLGGLGYSEIEAEADRIAADYGLDEARVDRLLFRYGTVLRHVLDLIDGDPSLSVPLAEA
+PRYLRAEIVYAARAEGVVHLDDVIERRTRLSTEVRDRGVAAAEEIASLVAPELGWDEERI
+AGEIRAYKNLVAARLRGETAHDDVTAAAALAAADAAPVHGKEPVHGHDLPA
+>4_2140
+MPTLRTVSLSAATREDHLARLRATSPEAPLDILIVGGGSTGVGAAFDAATRGLDVGIVEA
+RDWASGTSSRSSRLMHGGLRYLEMLDVKLVYEALRERDLLLTQTAPHLVRPLRFVFPFFH
+KVIDRGFIGAGVTMYDAMQSLGRRRAMGAHRHLSRRSMAATFPSLDDEKIVGAVEYADAQ
+FDDARLAMMLVRSAVDHGAVAANYTAVTGYLRGDDGRVQGVRVREETSGEEFDVHARAVI
+LAGGVWTQEQQELAEADGGLEVLASKGAHITVPRDRIRADAATGVITKTEKSVLFLIPWD
+EYWVIGTTDTPWAEDVAHPATTADDIDYILEHANAVLKEDLTRDDVVATYAGLRPLLQPV
+TGSDGGSTKISREHTVTEVAPGLTAVAGGKWTTYRAMAEDVVDFVVRETHPTRPSLTEHI
+PVLGGLGYSEIEAEADRIAADYGLDEARVDRLLFRYGTVLRHVLDLIDADPSLSVPLAEA
+PRYLRAEIVYAARAEGVVHLDDVIERRTRLSTEVRDRGVAAAEEIASLVAPELGWDEERI
+ADEIRAYKNLVAARLRGETAHDDVTAAAALAAADAAPTP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000422.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000422.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cd1db46f61d4e8d29d734eafcdfab29e7f4dc664
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000422.fa
@@ -0,0 +1,25 @@
+>0_452
+MATPLLDLAARRGVVFPLRTERLTLTSFAADDAPAVFDFCRLEEVWTWTSGRAGSAGELR
+ESYLAAGDRLTVRAGEAIIGVGKLAVQDAWSQGGPREEARDAQAEIGWTIHPTHADQGYA
+TELAGALLKLAFTGLGVHRVEAEAFADNAPTLRVMEKVGLRHEGTFREESLHLTRGWVDG
+VTYAMLASEFLARV
+>1_146
+MATPLLELAASRGVCFPLRARRLTLTPFRGLDAPAVWSFCRLEQVWSWTSGRPESENALR
+ESYLGAGDRLTVRAGDVIVGVGKVAVQDAWSQDGPQEEARDAQAELGWTIDPRQAGQGYG
+TELARALLGFAFDDLGVRRVEAHAFADNAPSLRIMEKVGMRHEGTFKEESLHLTRGWVDG
+ATYAMLASEFHSPLTQE
+>2_403
+MATPLLDLAARRGVAFPLRTERLTLTPFTAVDAPAVWDFCRLEEVRTWTSGRAGSAAELR
+EEYLATGDRLTVRDGAGDVVGVGKLAVQDAWSQGGPHPDARDAQAELGWTVAPEHAGRGY
+ATEIGRALLDLAFRGLGVRRVEAGAFADNAPSLRVMAKIGLRHEGTFLGESLHLTRGWID
+GVTFALLASEYEGGAAASRA
+>3_2111
+MATPLLELAASRGVCFPLRTRRLTLTPFRGLDAPAVWSFCRLEQVWSWTSGRPESENALR
+ESYLGAGDRLTVRAGDVIVGVGKVAVRDAWSQGGPREEGRDAQAEIGWTIDPRQAGQGYG
+TELARALLGFAFDDLGVRRVEAHAFADNAPSLRIMEKVGMRHEGTFKEESLHLTRGWVDG
+ATYAMLASEFHSPLTQE
+>4_159
+MAPPLLELAASRGVCFPLRARRLTLTPFRGLDAPAVWGFCRLEQVWSWTSGRPESEGALR
+ESYLAAGDRLTVRVGDVIVGVGKAAVQDAWSQGGPREEARDAQAEIGWTIDPRQAGQGYG
+TELARALLGFAFNDLGVRRVEAHAFADNAPSLRIMEKVGMRHEGTFKEESLHLTRGWVDG
+ATYAMLASEFHSPLTQE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000423.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000423.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c0b86e39bdd84cc8a66d7f8f98727dfeab08f11d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000423.fa
@@ -0,0 +1,30 @@
+>0_456
+MHLIILARMTPLSDPLWGSRATAAGRLAHDVAWRIVRGEIAAGEMLTEVRLSTEAGISRT
+PAREALLQLESWGLVRLLPKKGAAVQALTPQSVADLTALRGLLESTALATVAARPDAVGP
+LVATLTANLEQQRAALDAGDLAAFSALDVRFHRDVIATCGNAAFDEVVRTFAPRLARLIH
+AATGGSVDAARRLLDGHAEICAQLAAGCAADAQRALQAHLDAAGTGVVVPGLPTVSQPEA
+GEPR
+>1_2196
+MHPITLARMTPLSDPLWGSRATAAGRLAHDVAWRIVRGEIAAGEMLTEVQLSTEAGISRT
+PAREALLQLERWGLVRLLPKKGAAVQALTPQSVADLTALRGLLESTALATVAARPDAVGP
+LVATLTANLEQQRAALDAGDLAAFSALDVRFHRDVIATCGNAAFDEVVRTFAPRLARLIH
+AATGGSVDAARRLLDGHAEICAQLAAGRAADAQRALQAHLDAAGSGVVPGLPPVGPSEAG
+EPR
+>2_412
+MHLIILARMTPLSDPLWGSRATAAGRLAHDVAWRIVRGEIAAGEMLTEVQLSTDAGISRT
+PAREALLQLERWGLVRLLPKKGAAVQALTPQSVADLTALRGLLESTALATVAARPDAVGP
+LVATLTANLEQQRAALDAGDLAAFSALDVRFHRDVIAMCGNAAFDEIMGTFAPRLARLIH
+AATGGSVDAARRLLDGHVQICAQLAAGRAADAQRALQAHLDAAGAGVVVPGLLPVGSSEA
+GEPR
+>3_1907
+MHPITLARMTPLSDPLWGSRATAAGRLAHDVAWRIVRGEIAAGEMLTEVQLSTEAGISRT
+PAREALLQLERWGLVRLLPKKGAAVQALTPQSVADLTALRGLLESTALATVAARPDAVGP
+LVATLTANLEQQRAALDAGDLAAFSALDVRFHRDVIATCGNAAFDEVVRTFAPRLARLIH
+AATGGSVDAARRLLDGHAEICAQLAAGRAADAQRALQAHLDAAGSGVVPGLPPVGPSEAG
+EPR
+>4_2128
+MHPITLARMTPLSDPLWGSRATAAGRLAHDVAWRIVRGEIAAGEMLTEVQLSTEAGISRT
+PAREALLQLERWGLVRLLPKKGAAVQALTPQSVADLTALRGLLESTALATVAARPDAVGP
+LVATLTANLEQQRAALDAGDLAAFSALDVRFHRDVIATCGNAAFDEVVRTFAPRLARLIH
+AATGGSVDAARRLLDGHAEICAQLAAGRAADAQRALQAHLDAAGSGVVPGLPPVGPSEAG
+EPR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000424.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000424.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5bb35f4d8447d6c537744120c36381905ad864ad
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000424.fa
@@ -0,0 +1,17 @@
+>0_457
+MIEGLLILLLCQLAGTLVADTLHLPIPGAVLGMLLLLGLLAWRRPAEDAPVMTTSHHLLQ
+HLPLLFVPAGVGVVAVLGLIGEHRALMLVGFVVPWLLGLVVTAGVAAPLARRLTNKKENA
+Q
+>1_2195
+MIEGLLILLLCQLAGTLVADTLHLPIPGAVLGMLLLLGLLAWRRPAEDAPVMTASHHLLQ
+HLPLLFVPAGVGVVAVLGLIEEHRALMLVGFVVPWLLGLVVTAGVAAPLARRLTDKEDAQ
+>2_413
+MIEGLLILLLCQLAGTLVADTLHLPIPGAVLGMLLLLGLLAWRRPAEDAPVITASHQLLQ
+HLPLLFVPAGVGVVAVLGLIQEHRALMLVGFVVPWLLGLVVTAGVAAPLARRLTNKKEDA
+Q
+>3_1906
+MIEGLLILLLCQLAGTLVADTLHLPIPGAVLGMLLLLGLLAWRRPAEDAPVMTASHHLLQ
+HLPLLFVPAGVGVVAVLGLIEEHRALMLVGFVVPWLLGLVVTAGVAAPLARRLTDKEDAQ
+>4_2127
+MIEGLLILLLCQLAGTLVADTLHLPIPGAVLGMLLLLGLLAWRRPAEDAPVMTASHHLLQ
+HLPLLFVPAGVGVVAVLGLIEEHRALMLVGFVVPWLLGLVVTAGVAAPLARRLTDKEDAQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000430.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000430.fa
new file mode 100644
index 0000000000000000000000000000000000000000..68b1b21e86d2eaaf6944c9317107ab81d2db1b6f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000430.fa
@@ -0,0 +1,28 @@
+>0_484
+MSRGGCLSGGLQSKCGEFRLQFPDRHSPRTACRPHRASAPHLRTAPHVRTFLATLDPDDA
+EPFLEMSPRLVPETWERFRDHALPGIRAVDEDAVERPSARYVLDPVPEEAGPRVEAPALI
+LTGRSWGSGPPRRRGRRGTEAPVREARSAHPLATRPAGFPSATCRGALAPWPT
+>1_2183
+MTEHTSEHTPENPHVVRRGSGVPLIEVHGNSVDHRLLLPLDDALAEAGEVERIYVDLPGF
+GRTSALQDDGGLPELAAWLVDWIRAEVGERPFAVLGNSLGGLLARHVAAEFGAQVLGLGL
+LAPVVDPDEDRRTRTDLVVRERDDAFMSTLDPDDAAPFLEMSPRLTRDTWERFREHALPG
+VRAVDEEALKRLSARYVLDAVPEEAAPPFEGPALILTGREDHLVGYRDQAALLEHYPRAT
+YAALDAAGHNVHLDQPEVAEALVRAWAVQVGRAASD
+>2_2037
+MSQPAPHLVRRGSGAPLVLVHGMGVDHRLLLPLDAALEAAGGWERVYVDLPGFGGTPALP
+APGGLPELADWLDGVVGEIAGEDRFALLGNSLGGLLVREVLARRPGQVAGLAMIAPVVDP
+DPERRDVPERVVLEQDEALLAELDGDDAAPFVEMAVIQTRPVWEGFREHVLPGVLAVDED
+AVDRLEDRYALDGPLPEERFGEFDRPTLIVTGRQDDKVGWRDQLALAEHFPRLTLAMLDR
+TGHNAHLDQEAAVGAMVRNWAEDAAREL
+>3_1896
+MTEHTSEHTPENPHVVRRGSGVPLIAVHGNSVDHRLLLPLDDALAEAGEVERIYVDLPGF
+GRTSALQDDGGLPELAAWLVDWIRAEVGERPFAVLGNSLGGLLARHVAAESGAQVLGLGL
+LAPVVDPDEDRRTRTDLVVRERDDAFMSTLDPDDAAPFLEMSPRLTRDTWERFREHALPG
+VRAVDEEALKRLSARYVLDAVPEEAAPPFEGPALILTGREDHLVGYRDQAALLEHYPRAT
+YAALDAAGHNVHLDQPEVAEALVRAWAVQVGRAASD
+>4_2116
+MTEHTSEHTPENPHVVRRGSGVPLIAVHGNSVDHRLLLPLDDALAEAGEVERIYVDLPGF
+GRTSALQDDGGLPELAAWLVDWIRAEVGERPFAVLGNSLGGLLARHVAAEFGAQVLGLGL
+LAPVVDPDEDRRTRTDLVVRERDDAFMSTLDPDDAAPFLEMSPRLTRDTWERFREHALPG
+VRAVDEEALKRLSARYVLDAVPEEAAPPFEGPALILTGREDHLVGYRDQAALLEHYPRAT
+YAALDAAGHNVHLDQPEVAEALVRAWAVQVGRAASD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000434.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000434.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7ae0bc7db75f56a5e57f870b31612cd23c0217fb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000434.fa
@@ -0,0 +1,25 @@
+>0_497
+MSHDLHLTHGPIRLRPLTPDDAPRLRAIVDEASWAGMSTPLPETDAAMAEHLRELMGRPG
+LQAFAVERDGEFVGRTALYDPVPTVRVDVGHTVYARPVWGTEVNPACKLLLLGHAFEELG
+VARVGLRCDHRNTRSHRAILRLGATFEGTLRAFRRAADGTVADADHFSVTAPEWPAVRAG
+LETRLGA
+>1_2159
+MKHEIVLTRGDLTLRPLTPDDGPALRELVDAAMWAGNSAPLPVDGAAMSAHLAELSEREG
+TFAFAVEQGGELVGRTSLYDLVPGLRVEVGHTVYARRVWGTSVNPGCKLLLFGHAFEEWA
+LERVALRCDHRNARSHAAIARLGATFEGTLRRFRPAADGTIADVDYFSVVREEWPAVRGG
+LEARLAA
+>2_445
+MPAAQLPADLLLEHGAVRLRPLTLDDAPRLRALVDAGSWAGMSSPLPTSDEAMAAHLAQL
+MAREDLTAFAVERDGEFVGRTAYYEHVPGVRVDVGHTIYAREVWGTEVNPACKLLLLRHA
+FEALGVERVGLRCDHRNTRSHRAILRLGATFEGTLRAFRPAADGTVADVDYFSVLAAEWP
+AVRAGLEARLAGSAPAD
+>3_1883
+MKHEIVLTRGDLTLRPLSPTDGPALRELVDAAMWAGNSAPLPVDGAAMSAHLAELIEREG
+AFAFAVEQGGELVGRTSLYDLVPGLRVEVGHTVYARRVWGTSVNPGCKLLLFGHAFEEWA
+LERVALRCDHRNARSHAAIARLGATFEGTLRRFRPAADGTIADVDYFSVVREEWPAVRAG
+LEARLTA
+>4_2099
+MKHEIVLTRGDLTLRPLSPTDGPALRELVDAVMWAGNSTPLPVDGAAMSAHLAELIEREG
+TFAFAVEQGGELVGRTSLYDLVPGLRVEVGHTVYARRVWGTSVNPGCKLLLFGHAFEEWA
+LERVALRCDHRNARSHAAIARLGATFEGTLRRFRPAADGTIADVDYFSVVREEWPAVRAG
+LEARLAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000435.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000435.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b13e28cd8b3a2d2884056bcf1d19c18699ff5983
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000435.fa
@@ -0,0 +1,35 @@
+>0_500
+MKAWQFSGTGKPLELNEVPEPTPGPGEVVVDVKAAGICHSDVSAIDDAGWMPLFPELPHT
+MGHENAGVISAVGEGMDHWKVGDRVGLAPMNSKGEAIGYHTWEGGFGPKLRATDDNLVKL
+PDEVPFDLGAMATDAGLTAYHAVVAKGGVKKGMKVGIIGLGGLGYIGAKVAALMGAEVYG
+AEVNPKTRELKDEIGLTAVAESILEFKDVGLELVVDYAGFGTTTAEGITALKKDGVFVQV
+GMGKLEAPLNTYELITKTISVLGSNSGTKEDLAGIYELMQRGELNPPINRITQADIPDAI
+ETLRAGGVIGRYIAMYDDAK
+>0_793
+MHQAYAVYEGDTAIHEIEVETPEATGRSVLLKVLRSGVCHTDTHLREGGYDLGSRGTMSL
+TDRGVPYPLVMGHEVVGEVTAVGDEVQDVRVGQRMLVYPWIGCGECRMCREGRDNACAAG
+KNLGVARHGGYAETLWVPDAKYLVDIGDLDPSWTATLACSGITAYSAVDQVLPLDEEESV
+VVIGAGGLGLTAIALLSARGHRTVVAVDRSEKNLELARQMGASATVVSDDDVAAALKEAL
+GGGAAAVIDFVNNGATATLGFDSLAKAGQMVQVGLFGGEVTLPNALLSLKMIRISGSFVG
+TLQQMKDLVQIARTTDLPKIPIIERQLSAEQVAASLDDLTAGTVSGRVVLTA
+>0_926
+MTTMKAVRFTAYKTFPELKEIERPTPGPGEVLLKVAGAGACHSDVAVYDEFEAGMNPLVD
+PEYTLGHETSGWVEELGEGVTGFEVGSAQLVYGPVGCGHCPACSRGQDTYCQNVAEMDYA
+GIGLGRDGGMAEYVTVPARNLVPLGDADPVPASALADAGLTPYHAIKLALPRLNRAGTYA
+LVVGLGGLGLMAVQILKDLTGATVIATDMKPEAMAEAEKYGAVTVPSGEDQVARIREITG
+GRGVDAAFDFVGIAATARAALDSAAVQSRVTIVGIGNGSTIDWSFLSTPYEAELVTTYWG
+TVEELHELAGLYRDGKVEPLYTTYAMDGALQAYRDLQDGKISGRAVVVPHGQA
+>0_2335
+MKALYESGPHAGFEFTERPEPECGAHDVKIRVFTTGICGTDLHIEAYDAAAQAMIQAPMI
+PGHEFYGEVVEVGDLVEHVEVGHRVSGEGHVVCGMCRNCRAGRRQMCINTVSVGVQRDGA
+FAEYVVIPEANVWVHKGEHVTPELGAIFDPLGNAVHTALSFPLVGEDVLITGAGPIGLMA
+IPIARHAGARYIAITDVSAERLELARSMGADAAIDVSATRIREAQRELGLAEGFDVGLEM
+SGRASALQEMVANMNHGGKIALLGLPAEEIAIDWQTVVTHMLTIKGIYGREMFETWYAMA
+AMLQTNATLRERVESVVTDVIAAADWKRGFDAARAGATGKIVLDWRNL
+>2_867
+MVTMRAVRFEAYQQFPALKDVEKPVPGPGEALLKVAGAGACHSDVAVYSEFQPGMNPLID
+PEYTLGHETSGWVEELGDGVVGLEKGEAMLVYGPTGCGRCRACSRGQDTYCENVAAMAAA
+AVGLGRDGGMAEYVSVPARNLVPLGDADPIPASALADAGLTPYHAVKLALPTLGRPGACA
+LVVGLGGLGLMAVQIIKALTGATVIATDMKEDAMAQAEAYGAVTVPGGEGQVERIRELTG
+GRGVDAAFDFVGVAATARLALDCAAVQSRVTIVGLGNGSTIDWSFLSTPYEAELVSTYWG
+TLEELHEVARLYRDGRIEPLHTTYSLDDALQAYRDLQDGKVAGRAVVVPHGGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000438.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000438.fa
new file mode 100644
index 0000000000000000000000000000000000000000..18e76d68f00f38ae7ebefeb11463329412319874
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000438.fa
@@ -0,0 +1,40 @@
+>0_519
+MTQTLPATERTGATAPDDLSLAIPGTTVRGRTARVLPEDRPDTTSWAPQTADAGTDAAAP
+AASETPEAPTADAATRPAANAKPGLLGVVGSPAVRPPGAAHLTDEQVAELGRELDAIRDD
+VLSRRGASDAAYIRRVIRLQRWLEIGGRAALLNARHPAAFVAGTTMLTVAKIVENMEIGH
+NVLHGQWDWMRDPDIHSTTWEWDFVTPSRAWQNTHNDLHHRWTNVIGKDRDVGYNVLRMD
+ESEPWRPRHLLNPVINAGLAPIFEWGIALYDLELDRVHAGEKSRKELMTDLRSVGVKASR
+QFAKDYVATPAVAEFLTGSGKAALVAGLLANGLRNIWAHSVIFCGHFPEGAETFSEEMVD
+GETRGDWYVRQMIGSANISGSKLMHFMTGNLSHQVEHHLFPDLPSNRYAEVAPKVREICA
+RYGLPYTTGPLLKQVGSAWKKVFRLALP
+>1_2147
+MTQTPTAPDRTGATAPDDLALAIPGTTVRGRAARVLPQDRPDTTSWAPRTAESRAAATTP
+GLPGVVGSPAVRPPGAAHLTDAQVAELGRELDAIRDDVLARRGTSDAAYIRRVIRWQRRL
+ELGGRALLLNARHPAAFVAGTAMLTVAKIVENMEIGHNVLHGQWDWMRDPDIHSTTWEWD
+FVTPSRAWQNTHNDLHHRWTNVVGKDRDVGYNVLRMDESEPWRPRHLLNPVINAGLAPIF
+EWGIALYDLELDRVQSGEKSREELMTDLRSVGVKAARQFAKDYVATPAVAEVLTGSGKAA
+LVGTLLANGLRNIWAHAVIFCGHFPEGAETFSEEMVDGETRGDWYVRQMIGSANISGSKL
+MHFMTGNLSHQVEHHLFPDLPSSRYAEVAPRVREICARYGLPYTTGPLLRQVGSAWKKVF
+RLALP
+>2_451
+MIRSATAGKIIENMEIGHNVLHGQWDWMRDPDIHSTTWEWDFVTPSSAWQHTHNDAHHRW
+TNVTGLDEDLGYNVLRMDEAEPWEPRHLLNPVINAILAPFFEWGIAIYDLELAKVRAGEK
+PVADLRRDLASVAVKAVRQLAKDSLATPIAAELVSRSGSAWRKVFRLALP
+>3_1871
+MTQTPTTPSRTGATAPDDLALAIPGTTVRGRAARVLPQDRPDTTSWAPHTAESRAATSRS
+TAAATTPGLPGVVGSPAVRPPGAAHLTDAQVAELGRELDAIRDDVLARRGTSDAAYIRRV
+IRWQRRLELGGRALLLNARHPAAFVAGTAMLTVAKIVENMEIGHNVLHGQWDWMRDPDIH
+STTWEWDFVTPSRAWQNTHNDLHHRWTNVVGKDRDVGYNVLRMDESEPWQPRHLLNPVIN
+AGLAPIFEWGIALYDLELDRVQSGEKSREELMTDLRSVGVKAARQFAKDYVATPAVAEVL
+TGSGKATLAGTLLANGLRNIWAHSVIFCGHFPEGAETFSEEMVDGETRGDWYVRQMIGSA
+NISGSKLMHFMTGNLSHQVEHHLFPDLPSSRYAEVAPQVREICARYGLPYTTGPLLRQVG
+SAWKKVFRLALP
+>4_2092
+MTQTPTTPSRTGATAPDDLALAIPGTTVRGRAARVLPQDRPDTTSWAPHTAESRAATSRS
+TAAATTPGLPGVVGSPAVRPPGAAHLTDAQVAELGRELDAIRDDVLARRGTSDAAYIRRV
+IRWQRRLELGGRALLLNARHPAAFVAGTAMLTVAKIVENMEIGHNVLHGQWDWMRDPDIH
+STTWEWDFVTPSRAWQNTHNDLHHRWTNVVGKDRDVGYNVLRMDESEPWQPRHLLNPVIN
+AGLAPIFEWGIALYDLELDRVQSGEKSREELMTDLRSVGVKAARQFAKDYVATPAVAEVL
+TGSGKATLAGTLLANGLRNIWAHSVIFCGHFPEGAETFSEEMVDGETRGDWYVRQMIGSA
+NISGSKLMHFMTGNLSHQVEHHLFPDLPSSRYAEVAPQVREICARYGLPYTTGPLLRQVG
+SAWKKVFRLALP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000459.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000459.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cdb2bba27e3c36efda8b664e19c280248f06f202
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000459.fa
@@ -0,0 +1,36 @@
+>0_557
+MSGRGSATLEHAVARVRAARRRDARRVGTALAVLTAAVLALVLLRLTWGAYMVAVPDLVR
+ILTGTTIPGASFIVTEEKLPRAAAAVLAGAALGAAGALYRRGLGNPLASPDVLGVTSGAA
+AGAVLWQAAATGTGGTTDAARAAAALAGGLIAALAVLLAARGTGGERFVVAGIAVAAGAQ
+AVVAGTMVTLAEHDLQAAALWVSGSLTGVTWGRIGLLAAAVALALPLAAWLHGRLEPADT
+GEDLAHALGARPRRTRPAALLLGAVLAAAATAAVGPLAFVALLATPLARGLAGGRPSLAA
+AALAGAVLVLAADLLAAEAVALLADGTRLPTGVLTGAAGAPLMMTLLIRAGRRGERTA
+>1_2116
+MSLQCTAPDDVVARLRRADRRRLGGACAGLAVAVLVLALLRVVWGTYQVTVPDLVRILGG
+ETIPGASFIVLEEKLPRAVAAVLTGAALGAAGALYRRTLRNPLASPDILGVTQGAAAAVV
+LGMLATAGQTGGGSDLMRAATALIGGLAAVVAVFATARSVGGERFVVAGIAVAAAGQAVV
+AGAMLSLAQHDLQSATVWIAGSLNGVTWGRIALLAGVLVVALPLAGVLHARLAPADVGPD
+LAHALGARPRPTSAAALGLGAVLAAVATAVVGPLAFVALLATPVARGLTRGLPSLPAAAL
+TGAALVLLADLVAGEAVPLLTGAALPTGVLTGAAGAPLMLWLLLCQGRTPGGVRSA
+>2_485
+MSARRETTTPGRRDAAPGGDAPETVRALRRADARRVAGVVLGLAVLTAGLMLLRVTWGTY
+QVTVPDLVRILGGERIAGASFIVWEEKLPRAVAATLTGAALGAAGALYRRTLRNPLASPD
+VLGTTAGAAAGVVLTLTASAGQAGGSSDLARAGAALLGALAAGAAVLLAARSVGGQRFVV
+AGVGVAAAGQAIVSGAMLSLSEHDLASATRWIAGSLNGVTWGRIGLLAAVLALALPAAGW
+LHRRLAPADVGDDLAHALGARPRTTAALALTVGAVLAAAATATVGPLSFVALLATPLALG
+LTRGRPSLPAAALTGAGIVLLADVLGTEALGLIADGAALPTGVLTGAAGAPLMLALLLRA
+GRSSEGTR
+>3_1841
+MNLQHTAPDDVVARLRRSDRRRLGRACAGLAVAVLVLALLRVVWGTYQVTVPDLVRILGG
+ETIPGASFIVLEEKLPRAVAAVLTGAALGAAGALYRRTLRNPLASPDILGVTQGAAAAVV
+LGMLATAGQTGGGSDLMRAATALIGGLVAVAAVFATARSVGGERFVVAGIAVAAAGQAVV
+AGAMLSLAQHDLQSATVWIAGSLNGVTWGRIALLAGVLAAALPLAGALHTQLAPADVGPD
+LAHALGARARPTSAAALGLGAVLAAVATAVVGPLAFVALLATPVARGLTRGLPSLPAAAL
+TGAALVLLADLVAGEAVPLLTGAALPTGVLTGAAGAPLMLWLLLRQGRTPGGVRPA
+>4_2062
+MSVQRTASDDVVARLRRSDRRRLGGACTGLAVAVLVLALLRVVWGTYQVTVPDLVRILAG
+ETIPGASFIVLEEKLPRAVAAVLTGAALGAAGALYRRTLRNPLASPDILGVTQGAAATVV
+LGMLATAGQTGGGSDLMRAATALIGGLVAVAAVFATARSVGGERFVVAGIAVAAAGQAVV
+AGAMLSLAQHDLQSATVWIAGSLNGVTWGRIALLAGVLAAALPLAGALHTQLAPADVGPD
+LAHALGARARPTSAAALGLGAVLAAVATAVVGPLAFVALLATPVARGLTRGLPSLPAAAL
+TGAALVLLADLVAGEAVPLLTGAALPTGVLTGAAGAPLMLWLLLRQGRTPGGVRPA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000460.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000460.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3af74cb055f90f4f02333e6997ec3c91a6e8da19
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000460.fa
@@ -0,0 +1,35 @@
+>0_558
+MPRALLLIAPAVLAVLAALASLALGARPVPVDAAVGALTEAALHGPAAVTGMDGAAVLSR
+VPRTLAAILVGAGLAVAGAALQGATRNPLGDPGLLGLTAGAVLAFALGIALGVAGSLPAV
+MALAILGTLAAAALVTAVAAGAARVSGVPGPPSPLSLVLAGAATTAGATAVTSALVVLHP
+AVRDRLRLWTVGSVARADLGDALWLAPVVLAAVAAVVVLGPGMDALALGTDLAHGLGARP
+ERVRALLLAAAVVLTAAAVALAGTVGFLGLVIPHAVRRLRPPDARTLVLACALWGAVLVL
+VADTLGRLVIAPAEVHLGVTTAVLGVPVLLALLRRRGVAA
+>1_2115
+MPSTALASPARVRAGVLMGALPAALLLAALVAGVALGARTVPATTALDTLGAILTGHPVP
+EGIEAAAVASRVPRVVTGALVGAALAVAGAALQGATRNPLGDPGLLGLSAGAGLAVAAGM
+ALGVAGSTFGVLALAAVGTLVAAALGYAVAAAATRSGRTPGAPSPMALVLAGAALTAGAT
+AGTTALLVLSPTVQDRLRFWAVGTVARADLGEALALAPVIAVGLLAAVAVAPGLDALALG
+DDLAHGLGGRPERVRAVLLGAVVLLTAAAVALAGPVGFVGLLVPHALRRLRPPSTRALMV
+GCALWGAVLVILADLAGRLVVAPGEIHLGVTTVLLGVPVLLALLRRPGVAA
+>2_486
+MPSSPTRGALLFGLLPLALLLTAGLAALALGARPVPLTTTATTLQAMLAGEGVPAGVDAA
+AVASRVPRTLTAALVGAALAVAGAALQGATRNPLGDPGLLGLSAGASLATAIGLALGVSG
+STFWVLALAAAGTLAAALLVYAVAAAASRGAGAGGAPTPIGLVLAGAAVTAGAGAVTTAL
+LVLSPVVRDRFRFWAVGTVARADLGEAALLTPVIGLGIVLALAAARGLDALALGDDLAHG
+LGARPGRTRALLLAAVVLLTAAAVALAGPVGFVGLVVPHALRRLRPGGTRTLLIGSALWG
+AVLLVAADLLGRLVIAPAEIHLGVTTVLLGVPVLLVLLRRTGLGS
+>3_1840
+MPSTALASPARVRAGVLMGALPAALLLAALVAGVALGARTVPATTALDTLGAVLTGHPVP
+EGIEAAAVASRVPRVVTGALVGAALAVAGAALQGATRNPLGDPGLLGLSAGAGLAVAAGM
+ALGVAGSTFGVLALAAVGTLVAAALGYAVAAAATRRGRTTPGAPSPMALVLAGAAITAGA
+TAGTTALLVLSPTVQDRLRFWAVGTVARADLGEALALAPVIAVGLLAAVAVAPGLDALAL
+GDDLAHGLGGRPERVRAVLLGAVVLLTAAAVALAGPVGFVGLLVPHALRRLRPPSTRALM
+AGCALWGAVLVILADLAGRLVVAPGEIHLGVTTVLLGVPVLLALLRRPGVAA
+>4_2061
+MPSTALASPARVRAGVLMGALPAALLLAALVAGVALGARTVPATTALDTLGAVLTGHPVP
+EGIEAAAVASRVPRVVTGALVGAALAVAGAALQGATRNPLGDPGLLGLSAGAGLAVAAGM
+ALGVAGSTFGVLALAAVGTLVAAALGYAVAAAATRRGRTPGAPSPMALVLAGAAITAGAT
+AGTTALLVLSPTVQDRLRFWAVGTVARADLGEALALAPVIAVGLLAAVAVAPGLDALALG
+DDLAHGLGGRPERVRAVLLGAVVLLTAAAVALAGPVGFVGLLVPHALRRLRPPSTRALMV
+GCALWGAVLVILADLAGRLVVAPGEIHLGVTTVLLGVPVLLALLRRPGVAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000477.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000477.fa
new file mode 100644
index 0000000000000000000000000000000000000000..066816115527669cedc79e3d4c2a5cacc7c1a7ff
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000477.fa
@@ -0,0 +1,43 @@
+>0_595
+MSPLPASPLHRIPVRRIVRGAALAAGTGLVGVPMAVAAGLTGVDMVKRRGRRRRPAHNPG
+VFDAPVKDCHLRIFTSGEDLYEEMLAAIDSAERIVKFETYIWKADPTGQRFIEAFNRAAA
+RGVEVYVSYDGFGNLVVPRAFYRQLDPRIRVFRLPAFARPFWRGPVRNTGFNHSKIMVVD
+DEIGFVGGFNIGDDYATFWRDTHVCERGPAVWALDQSISIKWNAHHREGEQMSWRPPESW
+DPRVTVSANQPPLLVYPIRLTYLEAIQRAQHRILINTPYFIPDQQVLQALLHAARRGVDV
+QVMVPRDSNHIVADWASRGFYAGMLEAGITILLYEASMIHAKTATVDGIWSTVGTANIDR
+LSLGFNYESNVVVVDRDFAARMEEIFAIDAEQSERVESPRWQDRHGVARMVERLLVPLRP
+LL
+>1_2088
+MRRPSLPSLSRLPVRRLLRGAAVAAGVGLVGLPLTVAAGLTGVDMVKRGGRVRRPAPNPG
+VFDAHVEGSELRIFTSGEDLYKEMIAAIDGAQRIIKFETFIWKGDPTGQRFMDAFNRAAA
+RGVEVYVSYDGFGNLVVPPRFYRQLDPRIHVFRLPAFARPIWRGVVRHSGFNHSKIMVVD
+DEVGFAGGFNIGDDYARLWRDTHVRERGPAVWALGQSISIKWNAHHRAGEQMSWRPPDTW
+DPRVTVAANQPPLLVYPIRLSYLDAIQRAQHRILINTPYFIPDQQVLEALLHAARRGVDV
+QVMVPEDSNHIVADWASRGFFGKMLEAGITILLYRASMIHAKTATVDGIWSTVGSANVDR
+LSLGFNYESNVVVVDRDFAARMEEIFALDAQRAVRIDTPRWEDRHGLARVVEALLVPLRP
+LL
+>2_520
+MGYALRRAAVAGTTAFVGVPLATAVAVSAYDAFKHRGRKLRPAERPGTFQAQVGPDALTI
+YTAGDDVYDAMIQAIDDARETVKFETFIWKDDATGQRFVDALNRAAARGVQVWASYDGFG
+NLLIPPSFYRQFDPRVRVFRLPAFARPLWRGVVRYSGFNHSKILTVDGRVGFVGGYNVGD
+LYAAHWRDTHLRVEGPAVWGLEHSLSVLWNEGYTDMAEMPWTRPEEWEERTVVAANLPTQ
+LVYPIRNTYLNAIARAQDHIYISTPYFVPDRQVLDALKEAARRGVDVQVLVPKDSNHVVA
+DWVSRGFYSEMLDAGITILLYAAGMIHAKTATIDGRWATVGTANIDRLSLSFNYETNVSV
+VDRDFAARMEDVFRADAARSERIQSPRWKDRHGLARVVEKLLVPLRPLM
+>3_1812
+MAAGVGLVGLPLTVAAGLTGVDMVKRGGRVRRPAPNPGVFDAHVEGSELRIFTSGEDLYK
+EMIAAIDGAQRIIKFETFIWKGDPTGQRFMDAFNRAAARGVEVYVSYDGFGNLVVPPRFY
+RQLDPRIHVFRLPAFARPIWRGVVRHSGFNHSKIMVVDDEVGFAGGFNIGDDYARLWRDT
+HVRERGPAVWALGQSISIKWNAHHRAGEQMSWRPPDTWDPRVTVAANQPPLLVYPIRLSY
+LDAIQRAQHRILINTPYFIPDQQVLEALLHAARRGVDVQVMVPEDSNHIVADWASRGFFG
+KMLEAGITILLYRASMIHAKTATVDGIWSTVGSANVDRLSLGFNYESNVVVVDRDFAARM
+EEIFALDAQRAVRIDTPRWEDRHGLARVVEALLVPLRPLL
+>4_2032
+MHRPPLPSLSRLPVRRLLRGAAVAAGVGLVGLPLTVAAGLTGVDMVKRRGRVRRPAPNPG
+VFDAHVKGSELRIFTSGEDLYEEMIAAIDGAQRIIKFETFIWKGDPTGQRFMDAFNRAAA
+RGVEVYVSYDGFGNLVVPPRFYRQLDPRIHVFRLPAFARPIWRGVVRHSGFNHSKIMVVD
+DEVGFAGGFNIGDDYARLWRDTHVRERGPAVWALGQSISIKWNAHHRAGEQMSWRPPDTW
+DPRVTVAANQPPLLVYPIRLSYLDAIQRAQHRILINTPYFIPDQQVLEALLHAARRGVDV
+QVMVPEDSNHIVADWASRGFFGKMLEAGITILLYRASMIHAKTATVDGIWSTVGSANVDR
+LSLGFNYESNVVVVDRDFAARMEEIFALDAQRAVRIDTPRWEDRHGLARVVEALLVPLRP
+LL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000479.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000479.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d6648f4bceb179e5e69d4f165a39df732194d212
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000479.fa
@@ -0,0 +1,30 @@
+>0_598
+MAWLAVVLAVAVGLLLGLMGGGGSILMVPLLTYVAGLDPKEAIAGSLFVVGVTSLVSVGL
+HARAGNVRWRTGLVFGLAGMVGAALGGVVGGFLPGTVLLIAFAVMMLVTAWAMIRPKRPT
+AAPAEGGHAPGRALGRIVLDGVVVGFVTGIVGAGGGFLVVPALVLLAGLPMSAAVGTSLL
+VIALKSFAGLGGYLTSVTLDWPFLLAVTGVAVLGALIGAALVNRVPDKALEKGFGWFVLA
+MGVVMLVTELVGLLA
+>0_2599
+MSGTLILTLVLAVGVGLALGTLGGGGSILTVPLLTYIAGMPPKEAIAASLLIVGVTSLSS
+LVVHARHRRVRWRTGLIFGAAGMVGAFAGGLIGGQLPGAVLMVAFAIMMIATAIAMVTRK
+PRRDTDQPTADAGTERAHSLPMLRTMLEGIVVGLITGIVGAGGGFLVVPALVLLGGLSMP
+VAVGTSLLVIAMKSFAGLAGYLTTVTLDWPLVAAVTAMAVLGALLGARLSGRIPADALQK
+VFGVFVLLTGTLVLVIELPPAWAIAAGGLGLITVVLVLVCRLTALNCPFGLARPTPG
+>2_523
+MVPLALLVVLAAVVGLLLGLMGGGGSILTVPLLTLTAGMDPQEAIAGSLVMVGASSLVAA
+LVHATRGAVAWRTGLTFGAASMVGALAGGFVGRDLPGPVLMVGFAVIMLISAVKMIRPRR
+KGAGHDDAAPVPLGRVLLQGVGVGLITGVVGAGGGFLIVPALVLLARLPMPVAVGTSLLV
+IAMNSAMGLVSQLGATALDWAVLGPMAAAAAAAGVVGVVLAHRVPAAALKRGFGWFVLAM
+GVLILAQQALELLP
+>3_1808
+MWIVLALALVVGLLLGLMGGGGSILMVPLLTYVAGLEPKQAIAGSLFVVGVTSLVSVLLH
+SRHGTVRWRTGLIFGAASMVGALLGGVVGGFLPGTLLLIAFAVMMLFTAWAMIRPKKTQP
+AAAPSVEASADVEPRRHPLGKILLEGVVVGFVTGIIGAGGGFLVVPALVLLGGLPMSAAV
+GTSLLVIAMKSFAGLGGYLTSVTLPWDLLLWVTGVAVVGGLIGVPLVKRVPEKALKKGFG
+WFVLAMGLVILVRELIGLLV
+>4_2028
+MWIVLALALVVGLLLGLMGGGGSILMVPLLTYVAGLEPKQAIAGSLFVVGVTSLVSVLLH
+SRHGTVRWRTGLIFGAASMVGALLGGVVGGFLPGTLLLIAFAVMMLFTAWAMIRPKKTQP
+AAAPSVEASADVEPRRHPLGKILLEGVVVGFVTGIVGAGGGFLVVPALVLLGGLPMSAAV
+GTSLLVIAMKSFAGLGGYLTSVTLPWDLLLWVTGVAVVGALIGVPLMKRVPEKALKKGFG
+WFVLAMGLVILVRELIGLLV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000485.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000485.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9f651e19f402b5d31e50055a1f54cafb0f6d855e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000485.fa
@@ -0,0 +1,40 @@
+>0_611
+MNLRTLLREALTAARTSPVPSALVLLVVAAMCFAAVATVGRQAATEAAVAAELSGPAARV
+LTVTDSGGTGFLTGATVTTLAGLDAAEAALARDMPVDTVNAAIGAGGTRVAVTHVVGTLD
+RGVELTRGRLPGPGEVVVPEAKLAELGLAQPSGALESGDGRQWAVVGAFEARTPFEDLDG
+YALAVPATPASLVVQQVRVLALDTAGTRAMQDSALAVIDPDPRSSQVQPARALAAGNETI
+TGELAGLGRSLLLLILGAGAFFVAIVVLADVLIRRRDLGRRRTLGIGRADLVLLVAVRTA
+APAMRGAAVGAGAGHGLVLAQGSALGSAFVVGAAVLAVLTAVVASLLPAAFAAFRDPVRV
+MRTA
+>1_2082
+MNLRTLLREALTAARTAPVPSALVLLVVAAMCFAAVATVGRQAATEAAVAAELSGPAARV
+LTVTDSGGTGFLTGATVATLAGLDSAEAALARDMPVDTVNAAIGAGGTRVAVTHVVGTVD
+RGVELTRGRLPGPGEVVVPEAKLAELGLAQPSGALESGDGRQWAVVGAFEALTPFEDLAD
+YAIAVPAAPASLVVQQVRVLAPDTAGTRAMQDSALAVIDPDPRSSQVQTARALAAGNATI
+TGELAGLGRSLLLLILGAGAFFVAIVVLADVLIRRRDLGRRRTLGIGRADLVLLVAVRTA
+APAVLGAVVGAGTGYAVVVGQGGALGLDFVAGVAVLAALTAVVASLLPAAFAAFRDPVRV
+MRTA
+>2_536
+MNLRTLLREAVTAARTSPVPSALVLLVVAAMCFAAVATVGRQAATEAAVAAELSGPGARV
+LTVTDTGGTGFLTGATAATLAGLDTAEAALARDSPMDAVNTWIGRGGARVAVTNVVGTLD
+RGIELTRGRLPAPGEVVVPEAKLAELGLAQPSGAIEATDGRQWAVVGAFQAQDPFQDLDG
+YALTVPAAPDALVMQQVRVLAADTAGTRAMQEAALAVIDPDPRASSIQTARALSAGNQVI
+TGELAGLGRSLLLLILGAGAFFVSIVVLADVLIRRRDLGRRRTLGIGRGDLILLVAVRTA
+VPALLGAVLGSGAGYAVVAGQGGTLGVDFVAAVAVLAALTALLASLAPAAFAAFRDPVRV
+MRTA
+>3_1800
+MNLRTLLREAVTAARTSPVPSALVLLVVAAMCFAAVATVGRQAATEAAVAAELSGPGARV
+LTVTDTGGTGFLTGATAATLAGLDTAEAALARDSPMDAVNTGIGRGGARVAVTNVVGTLD
+RGIVLTRGRLPAPGEVVVPEAKLAELGLAQPSGAIEATDGGQWAVVGAFQAQDPFQDLDG
+YALTVPAAPDALVMQQVRVLAADTAGTRAMQEAALAVIDPDPRASSIQTARALSAGNQVI
+TGELAGLGRSLLLLILGAGAFFVSIVVLADVLIRRRDLGRRRTLGIGRGDLILLVAVRTA
+VPALLGAVLGSGAGYAVVAGQGGTLGVDFVAAVAVLAALTALLASLAPAAFAAFRDPVRV
+MRTA
+>4_2020
+MNLRTLLREAVTAARTSPVPSALVLLVVAAMCFAAVATVGRQAATEAAVAAELSGPGARV
+LTVTDTGGTGFLTGATAATLAGLDTAEAALARDSPMDAVNTGIGRGGARVAVTNVVGTLD
+RGIVLTRGRLPAPGEVVVPEAKLAELGLAQPSGAIEATDGRQWAVVGAFQAQDPFQDLDG
+YALTVPAAPDALVMQQVRVLAADTAGTRAMQEAALAVIDPDPRASSIQTARALSAGNQVI
+TGELAGLGRSLLLLILGAGAFFVSIVVLADVLIRRRDLGRRRTLGIGRGDLILLVAVRTA
+VPALLGAVLGSGAGYAVVAGQGGTLGVDFVAAVAVLAALTALLASLAPAAFAAFRDPVRV
+MRTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000492.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000492.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2325c9867adb9ce05176cf65e093b2b771b286c5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000492.fa
@@ -0,0 +1,55 @@
+>0_629
+MSQTTEAGGRLSAGHVIVKTLESHGVRRIYSVPGESYLDVLDGLHDSQIENVVCRHEGGA
+TYMAEADGKMNEVPGIAMVTRGPGAANAHVGLHTAWQDSTALVLFVGLIPFEHREKEAFQ
+EFDPHAWFGTGAKRVMVLDHADRASEIVAEAMFAATSGRPGPVVVGLPEDVIREQIDATL
+HPVIPVATGGMTVEDWKSLHSALKESKKPLFITGGNDWTDEGAQQLTQWLEGHKIPAAAE
+WRTEGTVPFSSPSYVGPIGYGRPKPTYDLLEETDLIVFIGTVPGDVVTNGFKIRQNWDKK
+NFLVTIDPSLRGRSGPVSHQIVAKPDVFVRDLVRMDLDVKPEWEEWTSRMRGEQETFAAL
+PPAEPSEGQAKMATLMANLMPKLPKDSMISLGAGEHTNWAHRYFPTEGYRAMISARNGSM
+GYSVPGAVAASLNFPDRTVVTIAGDGEFLMNGQELATAAQYGATPLVIVMDNQEYGTIRT
+HQEREYPERVSGTQLKNPDFAGMAEAFGGLGIRVEKDADVPAAVDAALKAVQEEGRFALI
+HLIVEQRVKAY
+>1_2072
+MSQTSQATGRLSAGHVIVKTLESHGVKRVYSVPGESYLDVLDGLHDSGIENVVCRHEGGA
+TYMAEADGKMNVVPGVAMVTRGPGAANAHVGLHTAWQDSTALVLFVGLIPFEHRDREAFQ
+EFDPHAWFGTGAKRVMVLDHPERASEIVAEAMFAASSGRPGPVVVGLPEDVIREEIDAHL
+HPQIPVASGGMTVGDWKSLHAALKESRKPLFITGGNDWTDEGAQTLTTWLEEHKIPAAAE
+WRTEGTVPFSSPSYVGPIGYGRPKPTYDMLEETDLIVFVGTVPGDVVTNGFTIRQNWDKK
+NFLVTIDPSLRGRSGPVSHQIVAKPDGFIRDLVRMELEVKPEWEEWTSRMRGEQEKFAAL
+PPAEPSEGQAKMATLMANLVPKLPKDSMISLGAGEHTNWAHRYFPTEGYRSMISARNGSM
+GYSVPGAVAASLNFPDRTVVTIAGDGEFLMNGQELATAAQYGATPLVIVMDNQEYGTIRT
+HQERQYPGRVSGTQLKNPDFAAMAQAFGGFGVRVERDADVPAAVDAALKAVQEEGRFALI
+HLIVEQRVKAY
+>2_546
+MSQNSEAPGRLSAGHLIVKTLESHGVRRVYSVPGESYLDVLDGLHDSAQIENVVCRHEGG
+ATYMAEADGKMNEVPGIAMVTRGPGAANAHVGLHTAWQDSTAMVLFVGLIPFEHRDREAF
+QEFDPHAWFDSGAKRVMVLDHPERASEIVAEAMFAAASGRPGPVVVGLPEDIIRVEVDAH
+LHPQIPVAPGGMTVEDWKSLHAALKESQKPLFITGGNDWTDAGAEALTSWLEDHKIPAAA
+EWRCEGTVPFSSPSYVGPIGYGRPDFTQHLLEETDLIVFVGTVPGDVVTDGFTIRQNWDK
+KNFLVTIDPSLRGRSGPVSHQIVAKPDVFVRDLVRMDLAVKPEWEAWTSRLRGQQEEFAA
+LPAAEPGDGQAKMATLMATLMPKLPKDSMISLGAGEHTNWAHRYFPTEGYRAMISARNGS
+MGYSVPGAVAASLNFPDRTVVTIAGDGEFLMNGQELATAAQYGATPLVIVMDNQEYGTIR
+THQEREYPERVSGTQLKNPDFAAMAEAFGGFGVRVEQDADVPAAVDAALKAVQEEGRFAL
+IHLIVEQRVKAY
+>3_1791
+MSQTSQATGRLSAGHVIVKTLESHGVKRVYSVPGESYLDVLDGLYDSGIENVVCRHEGGA
+TYMAEADGKMNVVPGVAMVTRGPGAANAHVGLHTAWQDSTALVLFVGLIPFEHRDREAFQ
+EFDPHAWFGTGAKRVMVLDHPERASEIVAEAMFAASSGRPGPVVVGLPEDVIRQEIDAHL
+HPQIPVAPGGMTVEDWKSLHAALKESRKPLFITGGNDWTDEGAQTLTTWLEEHKIPAAAE
+WRTEGTVPFSSPSYVGPIGYGRPKPTYDMLEETDLIVFVGTVPGDVVTNGFTIRQNWDKK
+NFLVTIDPSLRGRSGPVSHQIVAKPDVFIRDLVRMELEVKPEWEEWTSRMRGEQEKFAAL
+PPAEPSEGQAKMATLMANLVPKLPKDSMISLGAGEHTNWAHRYFPTEGYRAMISARNGSM
+GYSVPGAVAASLNFPDRTVVTIAGDGEFLMNGQELATAAQYGAKPLVIVMDNQEYGTIRT
+HQEREYPERVSGTQLKNPDFAAMAQAFGGFGVRVERDADVPAAVDAALKAVQEEGRFALI
+HLIVEQRVKAY
+>4_2011
+MSQTSQATGRLSAGHVIVKTLESHGVKRVYSVPGESYLDVLDGLHDSGIENVVCRHEGGA
+TYMAEADGKMNVVPGVAMVTRGPGAANAHVGLHTAWQDSTALVLFVGLIPFEHRDREAFQ
+EFDPHAWFGTGAKRVMVLDHPERASEIVAEAMFAASSGRPGPVVVGLPEDVIREEIDAHL
+HPQIPVAPGGMTVEDWKSLHAALKESRKPLFITGGNDWTDEGAQTLTTWLEEHKIPAAAE
+WRTEGTVPFSSPSYVGPIGYGRPKPTYDMLEETDLIVFVGTVPGDAVTNGFTIRQNWDKK
+NFLVTIDPSLRGRSGPVSHQIVAKPDGFIRDLVRMELEVKPEWEEWTSRMRGEQEKFAAL
+PPAEPSEGQAKMATLMANLVPKLPKDSMISLGAGEHTNWAHRYFPTEGYRSMISARNGSM
+GYSVPGAVAASLNFPDRTVVTIAGDGEFLMNGQELATAAQYGATPLVIVMDNQEYGTIRT
+HQERQYPGRVSGTQLKNPDFAAMAQAFGGFGVRVERDADVPAAVDAALKAVQEEGRFALI
+HLIVEQRVKAY
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000495.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000495.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6670b4b8b360aeca579b0816094c14f8d36a9d71
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000495.fa
@@ -0,0 +1,48 @@
+>0_632
+MSSTLATGAYRRAVDRAHESLDSVRLSLAPSSPTAPTGADQGLRTALQGLRREVRESWLR
+SLGALTPAGSALDAEAAATAPAVPGQTDPATLADDDLAAARREQRLAVALPVVRRMLIHP
+AAEAGMLAAIGNARGHLLWVEGDRTAVRHAETMGFVAGADWSEASMGTSAPGIVLATGAP
+TQVSRGEHLSPRVHPWSCSAVPLTDPATGRLVGVLDLTGGEDAVSHLALPLLQATVDAVH
+AAWRDLPAPSRGRPRGTVPTPGPSAPPSASPGPSPAAAPHRHDAAAGLLRVTGHLPPTLD
+GVELTGRHAEILTLLAWHGPGLTGAELEVALYPEETAGPRSAPSDAPARAISLRAEVHRL
+RRALQDAGAPVELLSRPYRLVGEVHADLLCAREALRAGDLDRALHAAAGPVLPRSVSPGV
+ASIRAELGEALREAVAQDADVEQLWAYLGRPEARDDVELWGVALRLLPADSPRRALAVAT
+LERIERDLA
+>1_2069
+MSSTLATGAYRRAVDRAHESLDSVRLSLAPSSSTAPTGADQGLRAALQGLRREVRESWLR
+SLGALTPAGSALDAGASAAAPAVPGQTDPATLADDDLAAARREQRLAVALPVVRRMLIQP
+AAEAGMLAAIGNARGHLLWVEGDRTAVRHAETMGFVAGADWSEASMGTSAPGIVLATGAP
+TQVSRGEHLSPRVHPWSCSAVPLTDPATGRLVGVLDLTGGEDAVSHLALPLLLSTVDAVH
+AAWRDLPAPSRGRPRGTVPTPGPSAPPSASPGPSPAGAPHRHDEAAGLLRVTGHLPPTLD
+GVELTGRHAEILTLLAWHGPGLTGAELEVALYPEETAGPRSAPGDAPARAISLRAEVHRL
+RRALRDVGAPVELLSRPYRLVGEVHADLLCAREALRAGDLDRALHAAVGPVLPRSASPGV
+ASIRAELGEALREAVAQDADVDQLWAYLGRPEARDDVELWGAALRLLPTDSPRRALAVAT
+LERIERDLA
+>2_549
+MSSTLATGAYRRAVDRAHESLAAVRLSLAPSSPTAPTGADQGLRAALQGLRREVRESWLR
+SLGVLTPAGSALDAGASATAPAVPGQTDPATLSDDDLAAARREQRLAVALPVVRRMLIQP
+AAEAGMLAAIGNARGHLLWVEGDRTAVRHAEALGFVAGADWSEASMGTSAPGIVLATGAP
+TQVSRGEHLSPRVHPWSCSAVPLTDPATGRLVGVLDLTGGEDAVSHLALPLLQTTVDAVH
+AAWRDLPAPSRGRSRGTVPTPGPSAPPSVSPGPSPAAAPHRHDAAAGLLRVTGHLPPTLD
+GVELTGRHAEILTLLAWHGPGLTGAELEVALYPEETVGPRSAPGDAPARAISLRAEVHRL
+RRALRDVGARVELLSRPYRLVGAVHADLLCAREALRAGDLDRALHAAAGPVLPRSASPGV
+ASIRAELGEALREAVAQDADVEQLWAYLGRPEARDDVELWGAALRLLPADSPRRALAVAT
+LERIERDLT
+>3_1788
+MSSTLATGAYRRAVDRAHESLAAVRLSLAPSSPTAPAGADQGLRAALQGLRREVRESWLR
+SLGALTPAVPGQTDPATLSDDDLAAARRDQRLAVALPVVRRMLIHPAAEAGMLAAIGNAR
+GHLLWVEGDRTAVRHAETMGFVAGADWSEASMGTSAPGIVLATGAPTQVSRGEHLSPRVH
+PWSCSAVPLTDPATGRLVGVLDLTGGEDAVSHLALPLLQATVDAVHAAWRDLPAPSRGRP
+RGTAPTPGPSAPPSASPGPSPAAAPHRHDAAAGLLRVTGHLPPTLDGVELTGRHAEILTL
+LAWHGPGLTGAELEVALYPEETAGPRPAPGDSPARAISLRAEVHRLRRALRDVGAPVALL
+SRPYRLVGEVHADLLCAREALRAGDLDRALHAAAGPVLPRSTSPGVASIRAELGEALREA
+VAQDADVDQLWAYLGRPEARDDVELWGAALRLLPTDSPRRALAVATLERIERDLA
+>4_2008
+MSSTLATSAYRRAVDRAHESLAAVRLSLAPSSPTAPAGADQGLRAALQGLRREVRESWLR
+SLGALTPAVPGQTDPATLSDDDLAAARRDQRLAVALPVVRRMLIHPAAEAGMLAAIGNAR
+GHLLWVEGDRTAVRHAETMGFVAGADWSEASMGTSAPGIVLATGAPTQVSRGEHLSPRVH
+PWSCSAVPLTDPATGRLVGVLDLTGGEDAVSHLALPLLQATVDAVHAAWRDLPAPSRGRP
+RGTAPTPGPSAPPSASPGPSPAAAPHRHDAAAGLLRVTGHLPPTLDGVELTGRHAEILTL
+LAWHGPGLTGAELEVALYPEETAGPRPAPGDSPARAISLRAEVHRLRRALRDVGAPVALL
+SRPYRLVGEVHADLLCAREALRAGDLDRALHAAAGPVLPRSASPGVASIRAELGEALREA
+VAQDADVEQLWAYLGRPEARDDVELWGAALRLLPADSPRRALAVATLERIERDLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000499.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000499.fa
new file mode 100644
index 0000000000000000000000000000000000000000..48c332abe01a9f2be0df0c9cd7c6e320ab488d70
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000499.fa
@@ -0,0 +1,20 @@
+>0_636
+MTETPQSSSGQSRDEILARLEEIYANDPAVREHGVTLGEVAEGRVVLHRDVTADMVNSHG
+ICHGGFLFHLADSALAYCVATFGAAPVTRRAEITYVAPARLGAHLVATARQSVEFGRDRM
+IEVGIEADGQLVAWFTGHSTSPRVHA
+>1_2065
+MTETPQSSSGQSRDEILARLEEIYANDPAVREHGVTLGEVAEGRVVLHRDVTADMVNSHE
+ICHGGFLFHLADSALAYCVATFGAAPVTRRAEITYVAPARLGAHLVATARQSVEFGRDRM
+IEVGIEADGQLAAWFTGHSTSPRVHA
+>2_553
+MTDTPQSSSGQSRDEILARLEEIYANDPAVREHDVTLGEVAEGRVVLHRDVTAGMVNSHE
+ICHGGFLFHLADSALAYCVATFGAAPVTRRAEITYVAPAKLGAHLVATARQSVEFGRDRM
+IEVGIEADGQLVAWFTGHSTSPRVHA
+>3_1784
+MTETPQSSSGQSRDEILARLEEIYANDPAVREHGVTLGEVAEGRVVLHRDVTADMVNSHE
+ICHGGFLFHLADSALAYCVATFGAAPVTRRAEITYVAPARLGAHLVATARQSVEFGRDRM
+IEVGIEADGQLVAWFTGHSTSPRVHA
+>4_2004
+MTETPQSSSGQSRDEILARLEEIYANDPAVREHGVTLGEVAEGRVVLHRDVTADMVNSHE
+ICHGGFLFHLADSALAYCVATFGAAPVTRRAEITYVAPARLGAHLVATARQSVEFGRDRM
+IEVGIEADGQLVAWFTGHSTSPRARA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000501.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000501.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2819a78284a1eee3ddb557cb4f427b4206d47c12
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000501.fa
@@ -0,0 +1,20 @@
+>0_638
+MGAWGRNVFQNDTALDLVDEVLDGSFDLDEFRKDFRREEDEGYLDASQGAALLALGALVR
+IARNEDHADLDVLLEHAEAEEVDLTDFIDQFSDEDIQTLRELIGVVIREPSCSELYELWE
+ESGELEQWLEYSRQCLP
+>1_2062
+MGAWGRNVFQNDTALDIVDEVLDGTFDLDEFRRNFRRDEDEGYLTASQGAALLTLGALVR
+IARNEDHADLEALLEHAEADEVDLTAFIGQFSDEDIETLRELIGVVIREPSCSELYQLWE
+ESGELEQWLEYSRECLP
+>2_557
+MGAWGRNVFQNDTALDIVDEVLDGTFDLDEFRRNFRRDEDEGYLTASQGAALLALGALVR
+IARNEDHADLEALLEHAETDEVDLTAFIDQFSDEDIETLRELIGVVIREPSCSELYQLWE
+ESGELEQWLEYSRECLP
+>3_1781
+MGAWGRNVFQNDTALDIVDEVLDGTFDLDEFRKNFRRDEDEGHLTASQGAALLTLGALVR
+IARNEDHADLEALLEHAETDEVDLTAFIDQFSDEDVETLRELIGVVIREPSCSELYQLWE
+ESGELEQWLEYSRECLP
+>4_2001
+MGAWGRNVFQNDTALDIVDEVLDGTFDLDEFRKNFRRDEDEGHLTASQGAALLTLGALVR
+IARNEDHADLEALLEHAETDEVDLTAFIDQFSDEDVETLRELIGVVIREPSCSELYQLWE
+ESGELEQWLEYSRECLP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000504.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000504.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ddee20ed3ee08bf012abad8b49c3c8b59916742f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000504.fa
@@ -0,0 +1,30 @@
+>0_643
+MAAIPPDPHADRTPAVDDLPLDAASPDGRAAAPVGLEPEGMAANVLEREIEHLMERFPCV
+GDEETVRAVVMDSYAQLAATSRHPDMLPNTTVQHASARLRAMAINQGSIESRHPRVLFVC
+HGNAGRSQMAAALLENRTGGAVKSRSAGTSPAGEVISTAFDAMSEIGIPLHHSYTKGVDE
+DVLKAAEVVVLFDGAEPLDIPEGTEVQEWSVPSIRGMSLEQVRGVRDALDLQVRGLIADL
+GEEGSDAPPPGEGAPVA
+>1_2058
+MAPIPPDPHADHAPAVDDMPLDTTAAPDIPAAVDPVPHGMAAHVLEREVGPLRARFPGVA
+DEATVRQLLFDSYAELAETSRHPEMLPTISVQHAASRLRARAINQGSIESRHPRVLFVCH
+GNAGRSQMAAALLENRTHGEVRARSAGTEPAGEVISTAFEAMNEIGIPLHHTYTKGLDPD
+VLRAAEIVVLFDGADPFEIPEGAQVQKWSVPSIRGMSLEQVRGVRDALDLEVRGLIADLG
+EAATPLPEEGTRVGRPLDLYPPGV
+>2_561
+MAPHPSDPAADLPAADVPLDPTGALPVVAPAPEGMASHVLDREAEHLHARYPEVGDVAMA
+RALLEDSYARLARTTRHPEMLPVTAANYAAARLRARAIAQGSVESRHPRVLFVCHGNAGR
+SQMAAALLENRSGGTVASRSAGTSPAGSVLPMALDVMNEIGLPLHHAFPKGVDRDILQAA
+QLVVLFDGAEEDLLDVPAGVEVQHWSVPSIRGLALEQVRGVRDALDLQVRGLIAELTALE
+GEEQGGAADPAA
+>3_1777
+MTPIPPDPHADHAPAVDDMPLDTTAAPDIPAAVDPVPHGMAAHVLEREVGPLMARFPGVA
+DEATVRQLLFDSYAELAETSRHPEMLPTISVQHAASRLRARAINQGSIESRHPRVLFVCH
+GNAGRSQMAAALLENRTHGEVRARSAGTEPAGEVISTAFEAMNEIGIPLHHTYTKGLDPD
+VLRAAEIVVLFDGADPFEIPEGAQVQKWSVPSIRGMSLEQVRGVRDALDLEVRGLIADLG
+EAATPLPEEGTRVGRPLDPYPPGV
+>4_1997
+MTPIPPDPHADHAPAVDDMPLDTTAAPDTPAAVDPVPHGMAAHVLEREVGPLMARFPGVA
+DEATVRQLLFDSYAELAATSRHPEMLPTTAVQHAASRLRARAINQGSIESRHPRVLFVCH
+GNAGRSQMAAALLENRTHGEVRARSAGTEPAGEVISTAFEAMNEIGIPLHHTYTKGLDPD
+VLRAAEIVVLFDGADPFEIPEGAQVQNWSVPSIRGMSLEQVRGVRDALDLQVRGLIADLG
+EAAADAPLPDADTRAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000505.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000505.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ad51215f8760fa6f91ae0bb078f1357785cb0ca4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000505.fa
@@ -0,0 +1,40 @@
+>0_644
+MSVPTLLPELGTAAAEAAVPPFARAVLWAHGDAAWRGDDGWTVLVDGPDRLRRLSALWQA
+AVAGREDPAAPVRGWVSAPFSDDSVEPAVLRVPARLRRSTASGIRETPQHVDAAALADAV
+AADGGGRLLPDGEVPLPADTSESAWDDAGYAAGVRELLARMAASDGALAKVVISRTLTVP
+ADDADLWRAIRALRREYPQTWVFAVGGLLGATPEILATRHAGLVGSRVLAGSLPRGEDEA
+EDAALRARLATDPRLGEEHRWAARSVLDALAPVVDLADPDPAPTVLTLPNVHHLATSVRG
+RLRDGRGTVLDVVAALHPTAAVGGTPTPEAVRVISEVEPVDRGRYAGPVGWLDQDGDGEI
+ALALRCGQQVPGGVRLQAGGGMVPGAVPEEEVTEIRAKLLPMRRALGIDLD
+>1_2057
+MSVRSLLPDLGTSATGTPEAAVPPFARAVLWAHGDDAWRGEGGWTVLLDGPDRLRRLSAL
+WQAAVAGRPDPTAPLRGWISSTFADDSPEPAVLRIPADLRRATPSGVRDVAQHVDADALA
+AAVAADRGARLLADGEVPLPADVADLAWDDAGYAAGVRELLTRMADSGGELAKVVISRTM
+TVPADDADLWRAIGELRREYPQTWVFAVGGLLGATPEVLATRHAGLVGSRVLAGSMPRGA
+DEEEDAALRERLASDPRLAEEHRWAARSVLDALAPVVDLADDDPAPTVLTLPNVHHLATS
+VRGRLRDGRGTVLDVVAALHPTAAVGGTPTPDAVRVIAEVEPVDRGRYAGPVGWLDQDGD
+GEIALALRCGQQVPGGVRLQAGGGMVPGAVPEEEVTEIRAKFLPMRRALGVAED
+>2_562
+MPPVPSVAVAALAARALSPSGSAAGRVPAFARAVVWAREDTVRVGVGGHTVLLDGPDRLR
+RLSALWRAAVAARPEPASPALAWVSSAFDDASPVPSVLRVPARVLQAGPDGVVEVPVAMP
+REALAAAVAACPGARLTEAGEVPLPADDPALAWDDAGYAAGVEEVVARMEASAGALSKVV
+VSRTETVPAGEDRLWAAVDALRAEYPQTWTFAVGGLVGATPEMLATRRDGVVASRVLAGS
+LPRGVDEGDDARLRARLAADPRLLREHHWAARSVLDALAPVVELEDAHPAPFVLTLPNVH
+HLATDVRGRLRPGEGAVLDVVAALHPTAAVGGTPTAEALEVIRAVEPVDRGRYAGPVGWL
+DQDGDGEIALALRCGQQVPGGVRLQAGGGIVPGAAAEEEVVEVGVKLLPMRRALGVA
+>3_1776
+MGAMSVRSLLPDLGAPATGAPEAAVPPFARAVLWAHGDDAWRGEGGWTVLLDGTDRLRRL
+SALWQTAVAGRPDPTAPLRGWISSTFADDSPEPAVLRIPADLRRATPSGVRDVAQHVDAD
+ALAAAVAADRGARLLADGAVPLPAGVADRAWDDAGYAAGVRELLTRMADSGGELAKVVIS
+RTMTVPADDADLWRAIGELRREYPQTWVFAVGGLLGATPEVLATRHAGLVGSRVLAGSMP
+RGADEEEDAALRERLASDPRLAEEHRWAARSVLDALAPVVDLADDDPAPTVLTLPNVHHL
+ATSVRGRLRDGRGTVLDVVAALHPTAAVGGTPTPDAVRVIAEVEPVDRGRYAGPVGWLDQ
+DGDGEIALALRCGQQVPGGVRLQAGGGMVPGAVPEEEVTEIRAKFLPMRRALGVAED
+>4_1996
+MGAMSVRSLLPDLGTPATGTPEAAVPPFARTVLWAHGDDAWRGEGGWTVLLDGTGRLRRL
+SALWQAAVAGRPDPTAPLRGWISSTFADDSPEPAVLRIPADLRRATPSGVRDVAQHMDAD
+ALAAAVAADRGARLLADGAVPLPADVADRAWDDAGYAAGVRELLTRMADSDGELAKVVIS
+RTMTVPADDADLWRAIGALRREYPQTWVFAVGGLLGATPEVLATRHAGLVGSRVLAGSMP
+RGADEEEDAALRDRLASDPRLAEEHRWAARSVLDALAPVVDLADDDPAPTVLTLPNVHHL
+ATSVRGRLRDGRGTVLDVVAALHPTAAVGGTPTPDAVRVIAEVEPVDRGRYAGPVGWLDQ
+DGDGEIALALRCGQQVPGGVRLQAGGGMVPGAVPEEEVTEIRAKFLPMRRALGVAED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000509.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000509.fa
new file mode 100644
index 0000000000000000000000000000000000000000..79670413f456b4ee033d892c86338b6a61d84f96
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000509.fa
@@ -0,0 +1,20 @@
+>0_649
+MRETGASPRTFVRETGASVVVRSYTGPMTTAPSALPLLVLNGPNLNLLGTREPEIYGSDT
+LDDVRSRTEARAAGHGLAVDFRQSNHEGELVDWIQEARTSHAGILINPAAYSHTSVAIRD
+ALSAVGRPIVEVHISNIHRREPFRHHSHVSAVADAVIAGAGVLGYELGIDWLAAAVRR
+>1_2052
+MTGAPILPLLVLNGPNLNLLGTREPEVYGTATLDDVRALTEARAAEHGLTVDFRQSNHEG
+ELIDWIQEARTSHAGVLINPAAYSHTSIAIRDALAAVDRPIAEVHISNIHRREAFRHHSH
+VSAVADVVIAGAGVQGYTLAVDWLAAAVRR
+>2_566
+MTDSMPAATAARLPLLVLNGPNLNMLGTREPEKYGFETLEDVRALTAARAAEHGLEVDFR
+QSNHEGELVDWIQEARTGFSGILINPAAYSHTSVAIRDALAAVPVPIVEVHITNIHAREE
+FRHHSVVSAVATTVIAGAGTQGYALGVEVLAARLAR
+>3_1770
+MTGAPILPLLVLNGPNLNLLGTREPEVYGTATLDDVRALTEARAAEHGLTVDFRQSNHEG
+ELVDWIQEARTSHGGVLINPAAYSHTSVAIRDALAAVDRPIAEVHISNVHRREAFRHHSH
+VSAVADVVIAGAGVQGYALAVDWLAAAVRR
+>4_1991
+MTATPALPLLVLNGPNLNLLGTREPEVYGTATLDDVRALTEARAAEHGLTVDFRQSNHEG
+ELIDWIQEARTSHAGVLINPAAYSHTSIAIRDALAAVDRPIAEVHISNVHRREAFRHHSH
+VSAVADVVIAGAGVQGYALAVDWLATTVRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000516.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000516.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9226f0aec011c8928cb5268621390179348ced7d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000516.fa
@@ -0,0 +1,15 @@
+>0_658
+MVYLLTLLAVIGCMALLDWRHRLFLWARPGAATAVLAVGMAYFLAWDVWGIAEGVFLHRD
+SPYMTGIMLAPQLPLEEGFFLLFLSQITMVLFTGAVRILEHRAGGTTAAGGTR
+>1_2042
+MIYLLALLGVIGCMLLVDRRFELFLWHRPLPALLVLAAGVAYFFAWDLWGIAEGVFLHRQ
+SPYMTGVMLAPQLPLEEGFFLLFLSQITMVLFTGALRLLRGRRGDARAATPADPTDGGSR
+>2_574
+MYLAALLLLCGCYLAIDARWRLALFSATPGRALAVLAAGLAFFLAWDLTGIAADVFWHGA
+DDVSVGLFLAPELPVEELVFLWFLCHQTLVYVEGLPRLTAWARARRAGRGEGATAS
+>3_1760
+MIYLLALLGVIGCMLLVDRRFELFLWHRPLPALLVLAAGVAYFFAWDLWGIAEGVFLHRQ
+SPYMTGVMLAPQLPLEEGFFLLFLSQITMVLFTGALRLLRGRRGDARAATPADPTDGGSR
+>4_1983
+MIYLLALLGVIGCMLLVDRRFELFLWHRPLPALLVLAAGVAYFFAWDLWGIAEGVFLHRQ
+SPYMTGVMLAPQLPLEEGFFLLFLSQITMVLFTGALRLLRGRGRDARAATPADPTDGGSR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000517.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000517.fa
new file mode 100644
index 0000000000000000000000000000000000000000..26f9a6bbe268c84b62cb882ed62b76604aa81440
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000517.fa
@@ -0,0 +1,16 @@
+>0_659
+MTFLDLILVFVGLAAAVLAAVALTGRVRARHAAAIAVAIAALAVLTAVFDNVMIAAGLFD
+YGHDLLSGIYVGLAPIEDFAYPVGSALLLPAVWLLMTGRRRRGGERSPDGGAEPTGDGSS
+TADAGR
+>1_2041
+MTFLDLVLVFVGFALAVLVGAALVGRVRGEHLRAVAATLVALWALTAVFDNVMIAAGLFD
+YGHELLVGAYVGQAPVEDFAYPLGSALLLPALWLLLTSRGRAGRRGRRPGRRPHPGDR
+>2_575
+MTYLTISLPFLAVAAAVLLASALTGRLDRRRRLGLVLAVALLVVLTAVFDSVIIGLGIVD
+YTQANINGARIGLAPVEDFLYPLAGVALLGGLWTLVRGGTR
+>3_1759
+MTFLDLVLVFVGFALAVLVGAALVGRVRGEHLRAVAATLVALWALTAVFDNVMIAAGLFD
+YGHELLVGAYVGQAPVEDFAYPLGSALLLPALWLLLTSRGRAGRRGRRPGRRPHPGDR
+>4_1982
+MTFLDLVLVFVGFALAVLVGAALVGRVRGEHLRAVTATLVALWALTAVFDNVMIAAGLFD
+YGHELLVGAYVGQAPVEDFAYPLGSALLLPALWLLLTSRGRAGRRGRRPGRRPHPGDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000519.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000519.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f634cb30321755183cf23714a66040f98da3a3ba
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000519.fa
@@ -0,0 +1,43 @@
+>0_665
+MSHSAPQCRSTRTAASDGAESTSGETTAASSVSEEERVDPTRTTEVSAVTPRILLSHEDG
+LTLLDAESGEVVKEQDVPGFTRLSDAGNGKDVLVTTGNGWEVFSTGIQAKAHGDHVHNDE
+SAPGMTGVTFPGEDPGHVVTHNGRTTLFADGTGAIRTFDATHLDKATPDLMPVMTEAETE
+DPHHGVALELYDGTLFTTQGTEDSRDTLQVIDSTTGEVTAETDDCPGSHGEAAAQPTEAG
+DVVVTGCENGPVVYRDGEFHKVEVETEYQRSGNLFGLHDSPIVLGDHKVEEEPTEAVERP
+TAIALIDTRTDELTTVDLGSSYWFRSLGRAEDGSAVVLTYDGEVNVIDEETGEVTAEYAV
+IEPWKEKDEWQEPGPILKVAGNTAYVTDAEAQKLVVVDLETGETVLEKDLDFAPVEMAVV
+TGQPESVKPEEAADAESGHDEHTDHDH
+>1_2034
+MSPSAPQRRAARAATFAATLAAAAIALTACGADAAPFSPASAPASASDGAESPAGEATAA
+SSVSEEDRVDPTQTTEVSAVTPRILLSHEDGLTLLDAESGEVVKEQDVTGFTRLSNAGNG
+KDVLVTTGNGWEVFSTGIQAKAHGDHVHHYESAPGMTGVTFPGEHPGHVVTHNGRTTLFA
+DGTGAIRTFDSTHLDKATPDLMPVMTEAETEDPHHGVALELSDGALFTTQGTEDSRDALQ
+VIDPKTGEVTAETDDCPGSHGEAAAQPTEAGDVVVMGCENGPVVYRDGEFHKVDVETEYQ
+RSGNLFGLHDSPIVLGDHKVEEEPKEAVERPTEIALIDTRTDELTTVDLGSSYWFRSLGR
+AEDGSAVVLTYDGEANVIDEETGEVTAEYPVIEPWKEKDEWQEPGPILKVAGNTAYVTDA
+EAQKLVAVDLETGETVLEKDLEFAPVEMAVVTGQPESVKPDEAADAASGHDEHTDHDH
+>2_581
+MTPRILLSHEDGLTLLDAESGEVVKEQDVAGFTRLSNAGNGKDVLVTTGNGWEVFSTGIQ
+AKAHGDHFHNYESAPGMTGVTFPGEHPGHVVTHNGRTTLFADGTGAIRTFDSAHLDKATP
+DLMPVMTEAETEDPHHGVALELSDGTLFTTQGTEDSRNTLQVIDPTAGEVKAETDDCPGS
+HGEAAAQPTEAGDVVVMGCENGPVVYRDGEFHKVDVETEYQRSGNLFGLHDSPIVLGDYK
+VEEEPKEAVERPTEIALIDTRTDELTTVDLGSSYWFRSLGRAEDGSAVVLTYDGEVNVID
+EETGEVTAEYPVIEPWKEKDEWQEPGPILKVAGNTAHVTDAEAQKLVAVDLETGETVLEK
+DLEFAPVEMAVVTGQRESVKPEEAADAESGHDEHTDHDH
+>3_1753
+MSHSAPQRRSARTAALSATLAAAAIALTACGADAAPSGPTSAPAPAADGAESPSGEARAA
+SSVSEGDRVDPTRTTEVSAVTPRILLSHEGGLTLLDAESGEVVREQDVPGFTRLSNAGNG
+KDVLVTTGNGWEVFSTGIQAKAHGDHVHHYESAPGMTGVTFPGEHPGHVVTHNGRTTLFG
+DGTGAIRTFDSAHLDKATPDLMPVMTEAETEDPHHGVALELSDGTLFTTQGTEDSRNTLQ
+VIDPKTSEVTAETDDCPGSHGEAAAQPTEAGDVVVMGCENGPVVYRDGEFHKVDVETEYQ
+RSGNLFGLHDSPIVLGDHKVEEEPEEAVERPTAIALIDTRTDELTTVDLGSSYWFRSLGR
+AEDGSAVVLTYDGEVTVIDEETGEVTAEYPVIEPWKEKDEWQEPGPILKVAGNTAYVTDA
+EAQKLVAVDLETGETVLEKDLEFAPVEMAVVTGEPESVKPEEGADAESGHDEHADHDHGH
+ESDEHTDHDH
+>4_1974
+MTGVTFPGEHPGHVVTHNGKTTLFADGTGAIRTFDSAHLDKATPDLMPVMTEAETEDPHH
+GVALELSDGALFTTQGTEDSRNTLQVIDPKTGEVTAETDDCPGSHGEAAAQPTEAGDVVV
+MGCENGPVVYRDGEFHKVDVETEYQRSGKLFGLHDSPIVLGDHKVEEEPKEAVERPTEIA
+LIDTRTDELTTVDLGSSYWFRSLGRAEDGSAVVLTYDGEVNVIDEETGEVTAEYPVIEPW
+KEKDEWQEPGPILKVAGNTAYVTDAEAHKLVAVDLETGETVLEKDLEFAPVEMAVVTGQP
+ESVKPEEGAHGDEDHDDDGHEGHDHGAEPSEGHEGHDH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000521.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000521.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ef328deab9531f2eb1da54f85fae3b5153960d83
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000521.fa
@@ -0,0 +1,45 @@
+>0_678
+MPRHATQQVHAGYEPAAPHRPVVPPIHQTTAFRFPDHATAASMFRLETPGFTYSRTGNPT
+VAVFENRLAALEGGIGAIATATGQAAVALSLLALLQGGKHLVASSQLYGGTVDLLTDTFA
+DFGIEVTFADPADPPAWAAAVRPDTRAFFLEAITNPLATLPDLPALADLAHAAGVPVVVD
+STLATPALYRPLEHGADVVVHSATKFLGGHGAVLGGAIVDGGTFDYGAAPDRWPQLARPK
+ARYGGQTLVERHGRGAYLTLTRSKFLHDLGPTLAPASAAQFIQGLETLDLRVARHTATAL
+AVAEHLAGHPAVARVHHPGVAGHPSARLAARDFPDGVGSVFSFDLACGPEAVAPFLDALE
+LFQLVVNVGDARSLVSHPATMTHCRLTRQQREDAGIAETTVRLSIGLECPDDLITDLDRA
+LAVVSAAGPAVLATTPAVPETTAVTQEVR
+>1_2026
+MPRHATQQVHAGYEPAAPHRPVVPPIHQTTAFRFPDHATAASMFRLETPGFTYSRTGNPT
+VAVFENRLAALEGGIGAIATATGQAAVALSLLALLQGGKHLVASSQLYGGTVDLLTDTFA
+DFGIEVTFADPADPPAWAAAVRPDTRAFFLEAITNPLATLPDLPALADLAHAAGVPVVVD
+STLATPALYRPLEHGADVVVHSATKFLGGHGAVLGGAIVDGGTFDYGAAPDRWPQLARPK
+ARYGGQTLVERHGRGAYLTLARSKFLHDLGPTLAAASAAQFIQGLETLDLRVARHTATAL
+AVAEHLAGHPAVARVHHPGVAGHPSAALAARDFPDGVGSVFSFDLACGPEAVAPFLDALE
+LFQLVVNVGDARSLVSHPATMTHCRLTRQQREDAGIAETTVRLSIGLECPDDLIADLDRA
+LAVVTAAGPAVPATTPAVPETAAVTQEVR
+>2_589
+MPRHATQQVHAGYEPAAPHRPVVPPIHQTTAFRFPDHATAASMFRLETPGFTYSRTGNPT
+VAVFENRLAALEGGIGAIATATGQAAVALSLLALLQGGKHLVASSQLYGGTVDLLTDTFA
+DFGIEVTFADPADPPAWAAAVRPDTRAFFLEAITNPLATLPDLPALAGLAHAAGVPVVVD
+STLATPALYRPLEHGADVVVHSATKFLGGHGAVLGGAIVDGGTFDYGAAPDRWPQLARPK
+ARYGGQTLVERHGRGAYLTLARSKFLHDLGPTLAPASAAQFIQGLETLDLRVARHTATAL
+AVAEHLAGHPAVARVHHPGVAGHPSAALAARDFPDGVGSVFSFDLACGPETVAPFLDALE
+LFQLVVNVGDARSLVSHPATMTHCRLTRQQREAAGIAETTVRLSIGLECPDDLIADLDRA
+LAVVSAAGPAVPAATPAVPETAAVTQEVR
+>3_1742
+MPRHATQQVHAGYEPAAPHRPVVPPIHQTTAFRFPDHATAASMFRLETPGFTYSRTGNPT
+VAVFENRLAALEGGIGAIATATGQAAVALSLLALLQGGKHLVASSQLYGGTVDLLTDTFA
+DFGIEVTFADPADPPAWAAAVRPDTRAFFLEAITNPLATLPDLPALADLAHAAGVPVVVD
+STLATPALYRPLEHGADVVVHSATKFLGGHGAVLGGAIVDGGTFDYGAAPDRWPQLARPK
+ARYGGQTLVERHGRGAYLTLARSKFLHDLGPTLAAASAAQFIQGLETLDLRVARHTATAL
+AVAEHLAGHPAVARVHHPGVAGHPSAALAARDFPDGVGSVFSFDLACGPEAVAPFLDALE
+LFQLVVNVGDARSLVSHPATMTHCRLTRQQREDAGIAETTVRLSIGLECPDDLIADLDRA
+LAVVTAAGPAVPATTPAVPETAAVTQEVR
+>4_1966
+MPRHATQQVHAGYEPAAPHRPVVPPIHQTTAFRFPDHATAASMFRLETPGFTYSRTGNPT
+VAVFENRLAALEGGIGAIATATGQAAVALSLLALLQGGKHLVASSQLYGGTVDLLTDTFA
+DFGIEVTFADPADPPAWAAAVRPDTRAFFLEAITNPLATLPDLPALADLAHAAGVPVVVD
+STLATPALYRPLEHGADVVVHSATKFLGGHGAVLGGAIVDGGTFDYGAAPDRWPQLARPK
+ARYGGQTLVERHGRGAYLTLARSKFLHDLGPTLAPASAAQFIQGLETLDLRVARHTATAL
+AVAQHLAGHPAVARVHHPGVAGHPSAALAARDFPDGVGSVFSFDLACGPEAVAPFLDALE
+LFQLVVNVGDARSLVSHPATMTHCRLTREQREAAGIAETTVRLSIGLECPDDLIADLDRA
+LAVVTAAGPAVPAATPAVPETAAVTQEVR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000526.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000526.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0eea21f8e84d8e5c1ba2be16ffb726572166a868
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000526.fa
@@ -0,0 +1,20 @@
+>0_683
+MTATVNDKHTVLPPTDLEEMLDVGRFLDGLTQPAALVGPDGQKVPLPPEAFNVLRDVVEA
+MRVGKAITVAPVDQLLTTQEAANFLGISRPTLVRLLEEGALPYERTTGGRHRRIRLQDVV
+SYQRRKRGERRAALSDLVGEASSAGLYGQNAESYREALRQARADLRGERG
+>1_2021
+MTATVNDKHTVLPPTDLEEMLDVGRFLDGLTQPAALVGPDGQKVPLPPEAFNVLRDVVEA
+MRVGKAITVAPVDQLLTTQEAANFLGISRPTLVRLLEEGALPYERTTGGRHRRIRLQDVV
+SYQQRKRGERRASLSDLVGEASSAGLYDQKAESYREALRQARADLRGERG
+>2_594
+MTATVNDKHTVLPPTDLEEMLDVGRFLDGLTQPAALVGPDGQKVPLPPEAFNVLRDVVEA
+MRVGKAITVAPVDQLLTTQEAANFLGISRPTLVRLLEEGALPYERTTGGRHRRIRLQDVV
+SYQQRKRGERRAALSDLVAEASSAELYDQKAESYREALRQARADLRGERG
+>3_1737
+MTATVNDKHTVLPPTDLEEMLDVGRFLDGLTQPAALVGPDGQKVPLPPEAFNVLRDVVEA
+MRVGKAITVAPVDQLLTTQEAANFLGISRPTLVRLLEEGALPYERTTGGRHRRIRLQDVV
+SYQQRKRGERRASLSDLVGEASSAGLYDQKAESYREALRQARADLRGERG
+>4_1961
+MTATVNDKHTVLPPTDLEEMLDVGRFLDGLTQPAALVGPDGQKVPLPPEAFNVLRDVVEA
+MRVGKAITVAPVDQLLTTQEAANFLGISRPTLVRLLEEGALPYERTTGGRHRRIRLQDVV
+SYQRRKRGERRASLSDLVGEASSAGLYDQKAESYREALRQARADLRGERG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000531.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000531.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ad677a0321b318f4e2da22234533284c41b3ebe4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000531.fa
@@ -0,0 +1,50 @@
+>0_698
+MTPASTASARVAAPPNSREPSPEQLQSVRLTLRSPGRLKTEVLAGLVVALALIPEAIAFA
+LIAGVDPQVGLFAAATMAMTIAFVGGRPAMVSAATAATALVVAPLVASHGLDHLIAAVIL
+AGGLQVVLGLLGVAKLMRFVPRSVMVGFVNALAILIFTSQLPDLMGVPWLVYPLTALGLA
+IILLLPRVTTAVPAPLVAIVVVTVIVLLAGADVPTVGDKGRLPDSLPALLVPDVPFTLET
+LQLLFPYALGMAVVGLLESLMTAKLVDDITDTRSSKTRESWGQGVANVVSGLFGGMGGCA
+MVGQTMINVKASGARTRISTFMAGVFVLILSVTLGDVVALVPMAALVAVMIFVSLATFDW
+HSIRPSTLAFMPKSETAVMLVTVAATVLTHNLAIGVGLGVLAAMVMFAQRVSHLATVTRT
+LEGQGRDAVARYRVQGELFFASSNDLYTQFDYAGDPARVVIDFSQAHLWDASTIAALDAV
+EEKYRRHGATVEITGLNVASRAMRARMSGRLGGGH
+>1_2080
+MPAPAATTTTTPPATPRERQSVLRTLRTPRWLGTEVLAAVVVALALIPEAIAFSIIAGVD
+PRVGLFASFTMAVTTAIVGGRPAMISAATGAVALVVAPLSHAYGVGHLLAAIILGGVIQI
+LLGVFGVARLMRFVPRSVMVGFVNALAILVFTSQLPELIGVPWLVYPLTALALAIVVLLP
+RLTTAVPATLVAVVVVTALVMAAGLAVPRVGDRGALPDALPVLGLPDVPLTWETLRLILP
+FSVGIAFVGLLESLLTAKLVDDITDTRSDKTRESWGQGVANVVSGLFGGMGGCAVVGQTM
+MNVKANGARTRISTFLAGVFLLVLVVAFGGFVAQIPMAALVGVMMFVAAATFDWHSVRPA
+TLRAMPRSETAVMVVTVAATVLTHNLAIGVGVGVLAALVLFAQRVSRLVTVVREVHDDGD
+AVTYRVHGALFFASSNDLYSQFEYALDPPRVVIDMSAAHVWDASTVAALDSVLTKYARHG
+IHAEVTGLNEASAAMHARLTGRLGA
+>2_537
+MPASPAAPPPALTPLQRQSVLRTLRTPRWLGTEVLAAVVVALALIPEAIAFSIIAGVDPR
+VGLFASFTMAVTTAVVGGRPAMISAATGAVALVVAPLSHAHGLDHLIAAIILGGLIQVAL
+GLLGVARLIRFIPRSVMVGFVNALAILVFTSQLPELIGVPWLVYPLTALALGIVLLLPRL
+TTAVPSTLVAIVVVTALVMAAGWSVPRVGDRGELPDALPGLFVPDVPLTWETLRLILPFS
+VGMAVVGLLESLLTAKLVDDVTDTRSDKTRESWGQGVANIVSGLFGGMGGCAVVGQTMMN
+VKANGARTRISTFLAGVLLLVLVVALGDLVGQIPMAALVGVMVFVAGAAFDWHSVRPATL
+RAMPRSETAVMLLTVLATVVTHNLAIGVGVGVLTAMVLFAQRVSRLARVERVVTDDNGGT
+AVYRVHGELFFASSNDLYSQFEYALDPPRVVIDLSAAHVWDASTVAALDAVVTKYAQHGI
+AAEVTGLNEASAAMHARLTGRTGA
+>3_1799
+MPALPAAPPPALTPLQRQSVLRTLRSPRLLGTEVLAAVVVALALIPEAIAFSIIAGVDPR
+VGLFASFTMAVTTAIVGGRPAMISAATGAVALVVAPLSHAYGVGHLLAAIILGGVIQILL
+GVFGVARLMRFVPRSVMVGFVNALAILVFTSQLPELIGVPWLVYPLTALALAIVVLLPRL
+TTAVPATLVAVVVVTALVMAAGLAVPRVGDRGALPDALPVLGLPDVPLTWETLRLILPFS
+VGIAFVGLLESLLTAKLVDDITDTRSDKTRESWGQGVANVVSGLFGGMGGCAVVGQTMMN
+VKANGARTRISTFLAGVFLLVLVVAFGGFVAQIPMAALVGVMMFVAAATFDWHSVRPATL
+RAMPRSETAVMVVTVAATVLTHNLAIGVGVGVLAALVLFAQRVSRLVTVVREVHDDGDAV
+TYRVHGALFFASSNDLYSQFEYALDPPRVVIDMSAAHVWDASTVAALDSVLTKYARHGIH
+AEVTGLNEASAAMHARLTGRLGA
+>4_2019
+MPALPAAPPPALTPPATPRERQSVLRTLRTPRWLGTEVLAAVVVALALIPEAIAFSIIAG
+VDPRVGLFASFTMAVTTAIVGGRPAMISAATGAVALVVAPLSHAYGVGHLLAAIILGGVI
+QILLGVLGVARLMRFVPRSVMVGFVNALAILVFTSQLPELIGVPWLVYPLTALALVIVVL
+LPRLTTAVPATLVAVVVVTSLVMAAGLTVPRVGDRGALPDALPALGLPDVPLTWETLWLI
+LPFSIGMAFVGLLESLLTAKLVDDITDTRSDKTRESWGQGVANVVSGLFGGMGGCAVVGQ
+TMMNVKANGARTRISTFLAGVFLLVLVVAFGGFVAQIPMAALVGVMMFVAAATFDWHSVR
+PATLRAMPRSETAVMVVTVAATVLTHNLAIGVGVGVLAALVLFAQRVSRLVTVVREVHDD
+GDAVTYRVHGALFFASSNDLYSQFEYALDPPRVVIDMSAAHVWDASTVAALDSVLTKYAR
+HGIHAEVTGLNEASAAMHARLTGRLGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000534.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000534.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f5068819e74fc593068b5511f2da0ee7069eea74
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000534.fa
@@ -0,0 +1,29 @@
+>0_745
+MEQTTGVRLRGARVEADGPEGVVALLQDVDLDLTAPRVAVVGENGSGKSTLARAVAGLVD
+VVAGEVTVHGVDAVRDVKALRRVVGMVFANPAAQAVMPTVREDVELTVKSLRDDDGRRLS
+KDDVAARVAAALAEHRLTELAERPCLALSSGQAQRLAMCSVMAGRPRLVIADEPTSLLDG
+RHRRIIADRLLAADGFQLLLVTHDLELARACDDAVWVHEGRVRAVGPAGEVVDAYAAFLD
+EAVAAESAEAAAGDPAAVNPAGASAEARP
+>1_1996
+MSPDRSVTLTGVRVEADGPEGAVVLLDGVDLTLAAPRVAVIGENGSGKSTLARAIAGLAD
+VVAGEVTVHGVDAVRDVKALRRTVGFVFANPAAQMVMPTVREDVELTVKSLRDDAGRRLT
+KDDVAARVAAALQEHRLTALADRACLSLSSGQAQRLAMCSVMTAGPSLVIADEPTSLLDG
+RHRRIVADRLLAADPSAPDGFQLLLVTHDLELARACDEAVWIHSGRVERTGPAEEVVEAY
+ERFLDHAVAAELR
+>2_709
+MTGRTPPTRAPHDDDAAVRLAGVQVAAPGGPVLLDGVDLHLTAPRVAVVGENGSGKSTLA
+RAVAGLAEVTAGEVAVHGVDAVRDVKALRRTVGMVFANPAAQMVMPTVREDVELTVKALT
+DDAGRRLSRAEVAARVDAALAEHRLTDLAERPCLSLSSGQAQRLAMCSVLVGAPRLVIAD
+EPTSLLDGRHRRIVADRLLGGAERGEFQLLLVTHDLDLARACDAAVWVHSGRVERHGPAA
+ETVAAYEAFLDDAVARELA
+>3_1713
+MSPDRSVTLTGVRVEADGPEGVVVLLDGVDLTLTAPRVAVIGENGSGKSTLARAIAGLAD
+VVAGEVTVHGVDAVRDVKALRRTVGFVFANPAAQMVMPTVREDVELTVKSLRDDAGRRLT
+KDDVAARVAAALQEHRLTALADRACLSLSSGQAQRLAMCSVMTTGPSLVIADEPTSLLDG
+RHRRIVADRLLAADPSAPDGFQLLLVTHDLELARACDEAVWVHGGRVERTGPAEDVVEAY
+EHFLDHAVAAELR
+>4_1931
+MLLDGVDLTLTAPRVAVIGENGSGKSTLARAIAGLADVVAGEVSVHGVDAVRDVKALRRT
+VGFVFANPAAQMVMPTVREDVELTVKSLRDDAGRRLAKDDVAARVAAALEEHRLTALADR
+ACLSLSSGQAQRLAMCSVMTAGPSLVIADEPTSLLDGRHRRIVADRLLAADPSAPDGFQL
+LLVTHDLELARACDEAVWIHGGHVERTGPAEDVVEAYERFLDHAVAAELR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000537.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000537.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b0507a90d9b3cea984dce7431def569b17de0dcd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000537.fa
@@ -0,0 +1,25 @@
+>0_752
+MTTVFYDDQGRPEPPETAGEAETLLGFLEFLRATFAWRTGGLDEAALRRRLDGHPSEMTL
+GGMLKHLAFVEFWWFEAVALGAPTSEPWVSVDWAADEDWDWHSAAEDSAADLRALWEGQV
+ERSRQAVQELLAADGDPLGRVLESYDGRRRVTLRWILTHMIEEYARHNGHADLLREQIDG
+QTGE
+>1_1991
+MTTVFYDDQGRPEPPFAAGEAATLLGFLDFLRATIEWKTADLDTAALHRRLPGHPSAMTL
+GGLLKHLAFVEFWWFEAVALGEPTSAPWVGADFDADPDWDWHSAAQDSAADLRALWQGQV
+ERSRQIVVDLLAADGDDGAAALARAHRIREGRDPVSLRWILTHMIEEYGRHAGHADLLRE
+GIDGQTGE
+>2_722
+MTTVFYDEQGRPEPPHAADEAATLLAFLDFQRATFAWRTSGLDDAALRRRLDGHPSEMTL
+GGMLKHLAFVEFFWFEVTAHGKPTSEPWVSVDWDADADWDWHSAAEDAAEELRDLWRESV
+ERSRAVVVRLLADGPAALDTTHPAWGGRADVSLRWILTHMIEEYARHNGHADLLREQIDG
+QTGE
+>3_1708
+MTTVFYDDQGRPEPPFAAGEAATLLGFLDFLRATIEWKTADLDTAALHRRLPGHPSAMTL
+GGLLKHLAFVEFWWFEAVALGEPTSTPWVGADFDADPDWDWHSAAQDSAADLRALWQGQV
+ERSRQIVVDLLAADGDDGAAALARAHRIREGRDPVSLRWILTHMIEEYGRHAGHADLLRE
+GIDGQAGE
+>4_1926
+MTTVFYDDQGRPEPPFAAGEAATLLGFLDFLRATIEWKTADLDTAALRRRLPGHPSAMTL
+GGLLKHLAFVEFWWFEAVALGEPTSAPWVGADFDADPDWDWHSAAQDSAADLRALWQGQV
+ERSRQIVVDLLAADGDDGAAALARAHRIREGRDPVSLRWILTHMIEEYGRHAGHADLLRE
+GIDGQTGE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000538.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000538.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ed60386b11f6c31e77121c93d7490de12ca2f956
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000538.fa
@@ -0,0 +1,50 @@
+>0_760
+MTGTHETALPASTTDGRAASAPLRRIGFDRAKYIDLQSQHIQERRREIGGKLYLEMGGKL
+FDDLHASRVLPGFTPDNKIAMLERIKDETEILVCFNAKDLERNKVRADLGITYEDDVLRL
+VDVFRERGFLVEHVVVTQLEDANHRALAFLEKLERLGLKVARHRVIPGYPHATARIVSEE
+GFGRNEWSQTTRDLVVVTAPGPGSGKLATCLSQVYHDHQRDIPSSYAKFETFPIWDLPLE
+HPVNVAYEAATADLDDINLIDPFHLAAHGEQVTSYNRDVEVFPLLAALLEKLTGTSPYRS
+PTEMGVNMAGAAIVDDEACREAARQEIIRRWYKAAVEEAANGESDEVSERIALIMSRLGL
+TSEDRPVVGASLLVAERTGEPGAAVQLADGTLVTGKTSALLGCSAAMLLNALKVLAGLSD
+EVHLLTPESIEPIQTLKTVHLGSTNPRLHTDEVLIALSVSAATDPNAKAAVEQLASLAGC
+DVHTTTILGSVDEGIFRSLGMLVTSEPKFQKKGLYRKR
+>1_1979
+MTGTHETARPASTTTEAAASGPLHRVGFDRAKYIELQSQHIQERRRQIGGKLYLEMGGKL
+FDDLHASRVLPGFTPDNKIAMLDRIKDETEILVCFNAKDLERNKVRADLGITYEDDVLRL
+VDVFRERGFLVEHVVVTQLEDANHRALAFLEKLERLGLKVARHRVIPGYPHAMSTIVSEQ
+GFGANEWSETTRDLVVVTAPGPGSGKLATCLSQVYNDRQRGIPAGYAKFETFPIWNLPLE
+HPVNAAYEAATVDLDDINLIDPFHLAEYGERVTSYNRDVEVFPLLSALLEKVTGTTPYKS
+PTDMGVNMAGAAIVDDEVCQEAAKQEIIRRYYKAQVNEALEGADDTESERVALVMSKLGL
+SSEDRPVVGAAQLVAERTGEPGAAVQLADGTLVTGKTSELLGCSAAVLLNALKVLAGIED
+DVHLLSPASIEPIQTLKTVHLGSKNPRLHTDEVLIALSVSAATDANARAAVEQLASLEGC
+DVHTTTILGSVDEGIFRSLGMLVTSEPKFQKKGLYRKR
+>2_728
+MTGTADMAPQKISRPLGFDREQYIALQSQHIQERRRQLGGKLYLEMGGKLFDDLHASRVL
+PGFTPDNKIAMLDRIKDETEILVCFNAKDLERNKVRADLGITYEEDVLRLVDVFRERGFL
+VEHVVVTQLEDSNHLALAFIEKLGRLGLKVARHRVIPGYPHAMATIVSEQGFGANEWSET
+TRDLVVVTAPGPGSGKLATCLSQVYNDRQRGIPAGYAKFETFPIWNLPLEHPVNAAYEAA
+TVDLDDINLIDPFHLAEYGEKVTSYNRDVEVFPLLSALLEKVTGTTPYKSPTDMGVNMAG
+AAIVDDAVCRAAAEQEIIRRYYKAQVNEALEGADDTESERAALVMSKLGLSSEDRPVVGA
+AQLVAERTGEPGAALELADGTIVTGKTSELLGCSAAMVLNALKVLAGIDDDAHLLSPASI
+EPIQTLKTQHLGSKNPRLHTDEVLIALSVSAATDENAKAAVEQLASLEGCDVHTTTILGS
+VDEGIFRSLGMLVTSEPVFQKKGLYRKR
+>3_1694
+MTGTHETARPASTTTEAAASGPLHRVGFDRAKYIELQSQHIQERRRQIGGKLYLEMGGKL
+FDDLHASRVLPGFTPDNKIAMLDRIKDETEILVCFNAKDLGRNKVRADLGITYEDDVLRL
+VDVFRERGFLVEHVVVTQLEDANHRALAFLEKLERLGLKVARHRVIPGYPHAMSTIVSEQ
+GFGANEWSETTRDLVVVTAPGPGSGKLATCLSQVYNDRQRGIPAGYAKFETFPIWNLPLE
+HPVNAAYEAATVDLDDINLIDPFHLAEYGERVTSYNRDVEVFPLLSALLEKVTGTTPYKS
+PTDMGVNMAGAAIVDDEVCQEAAKQEIIRRYYKAQVNEALEGADDTESERVALVMSKLGL
+SSEDRPVVGAAQLVAERTGEPGAAVQLADGTLVTGKTSELLGCSAAVLLNALKVLAGIED
+DVHLLSPASIEPIQTLKTVHLGSKNPRLHTDEVLIALSVSAATDENAKAAVEQLASLEGC
+DVHTTTILGSVDEGIFRSLGMLVTSEPKFQKKGLYRKR
+>4_1912
+MTGTHETARPASTTTEAAASGPLHRVGFDRAKYIELQSQHIQERRRQIGGKLYLEMGGKL
+FDDLHASRVLPGFTPDNKIAMLDRIKDETEILVCFNAKDLGRNKVRADLGITYEDDVLRL
+VDVFRERGFLVEHVVVTQLEDANHRALAFLEKLERLGLKVARHRVIPGYPHAMSTIVSEQ
+GFGANEWSETTRDLVVVTAPGPGSGKLATCLSQVYNDRQRGIPAGYAKFETFPIWNLPLE
+HPVNAAYEAATVDLDDINLIDPFHLAEYGERVTSYNRDVEVFPLLSALLEKVTGTTPYKS
+PTDMGVNMAGAAIVDDEVCQEAAKQEIIRRYYKAQVNEALEGADDTESERVALVMSKLGL
+SSEDRPVVGAAQLVAERTGEPGAAVQLADGTLVTGKTSELLGCSAAVLLNALKVLAGIED
+DVHLLSPASIEPIQTLKTVHLGSKNPRLHTDEVLIALSVSAATDENAKAAVEQLASLEGC
+DVHTTTILGSVDEGIFRSLGMLVTSEPKFQKKGLYRKR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000542.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000542.fa
new file mode 100644
index 0000000000000000000000000000000000000000..850c1c077babe559d410c55c3cb80a5746ce1c16
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000542.fa
@@ -0,0 +1,49 @@
+>0_765
+MTTQPAGPSPASTDHRRSLADSGAALGPLDGRYRAAVAPLVEHLSEAALNRNRIHVEVEW
+FIHLAEHAVLPGLTPLTDEQKAGLRAIVTDFDADSVAELAATEKVTVHDVKAVEYFIADR
+LEGLGLGRLKPLVHFACTSEDINNLAYAVGVRDAVEQVWLPAARAAVATVSAMAAEAAET
+PMLSRTHGQPATPTTLGKEMAVFVHRLTRQTRRIAAQEYLGKINGATGTYAAHLAAAPDA
+DWPALSRSFVEHLGLTWNPLTTQIESHDWQAELYADVARFNRILHGFCVDVWSYISIGYF
+TQIPVAGATGSSTMPHKVNPIRFENAEANLELSCALLDSLGATLVESRWQRDLTDSTSQR
+NIGVALGHSVLALTNVTKGMGQLQVAEPVLAEDLDTNWEVLGEAIQTVMRAEAIAGVPGM
+DNPYERLKELTRGHRVDGERMREFVRGLGLSDGAQARLLELTPAGYTGVAADLAREFGPA
+QG
+>1_1973
+MGAMTSQPAPASTAHRRPLAEAGIALGPLDGRYRAAVEPLVEHLSEAALNRNRIHVEVEW
+FIHLAEHRVLPGLEPLTAEQQAGLRAIVTDFDAESVAELAATEKVTVHDVKAVEYFIADR
+LEGLGLGRLKPLVHFACTSEDINNLAYAVGVRDAVEQVWLPAARAAVATVSAMAAEAAET
+PMLSRTHGQPATPTTLGKEMAVFVHRLTRQTRRIAGQEYLGKINGATGTYAAHLAAAPDA
+DWPALSRSFVEHLGLTWNPLTTQIESHDWQAELYADVARFNRILHGFCVDVWSYISIGYF
+AQIPVAGATGSSTMPHKVNPIRFENAEANLELSCALLDSLGATLVESRWQRDLTDSTSQR
+NIGVALGHSVLALTNVTKGMGQLQVADPVLAEDLDTNWEVLGEAVQTVMRAEAIAGVEGM
+DNPYERLKELTRGHRVDGARMREFVQGLGLSEGAQARLLELTPAGYTGVASELAKEFGPA
+QD
+>2_731
+MGAMTSQPAPASTAHRRSLAEAGIALGPLDGRYRAAVEPLVEHLSEAALNRNRIHVEVEW
+FIHLAEHRVLPGLEPLTAEQQAGLRAIVTDFDAESVSELAATEKVTVHDVKAVEYFIADR
+LEGLGLGRLKPLVHFACTSEDINNLAYAVGVRDAVEQVWLPAARAAVATVSAMAAEAAET
+PMLSRTHGQPATPTTLGKEMAVFVHRLTRQTRRIAGQEYLGKINGATGTYAAHLAAAPDA
+DWPALSRSFVEHLGLTWNPLTTQIESHDWQAELYADVARFNRILHGFCVDVWSYISIGYF
+AQIPVAGATGSSTMPHKVNPIRFENAEANLELSCALLDSLGATLVESRWQRDLTDSTSQR
+NIGVALGHSVLALTNVTKGMGQLQVAEPVLAEDLDTNWEVLGEAVQTVMRAEAIAGVEGM
+DNPYERLKELTRGHRVDGARMREFVQGLGLSEGAQARLLELTPAGYTGVASELAKEFGPA
+SAQG
+>3_1691
+MTSQPAPASTAHRRPLAEAGIALGPLDGRYRAAVEPLVEHLSEAALNRNRIHVEVEWFIH
+LAEHRVLPGLEPLTAEQQAGLRAIVTDFDAESVAELAATEKVTVHDVKAVEYFIADRLEG
+LGLGRLKPLVHFACTSEDINNLAYAVGVRDAVEQVWLPAARAAVATVSAMAAEAAETPML
+SRTHGQPATPTTLGKEMAVFVHRLTRQTRRIAGQEYLGKINGATGTYAAHLAAAPDADWP
+ALSRSFVEHLGLTWNPLTTQIESHDWQAELYADVARFNRILHGFCVDVWSYISIGYFAQI
+PVAGATGSSTMPHKVNPIRFENAEANLELSCALLDSLGATLVESRWQRDLTDSTSQRNIG
+VALGHSVLALTNVTKGMGQLQVADPVLAEDLDTNWEVLGEAVQTVMRAEAIAGVEGMDNP
+YERLKELTRGHRVDGARMREFVQGLGLSEGAQARLLELTPAGYTGVASELAKEFGPAQD
+>4_1909
+MGAMTSQPAPASTAHRRSLAEAGIALGPLDGRYRAAVEPLVEHLSEAALNRNRIHVEVEW
+FIHLAEHRVLPGLEPLTAEQQAGLRAIVTDFDAESVAELAATEKVTVHDVKAVEYFIADR
+LEGLGLGRLKPLVHFACTSEDINNLAYAVGVRDAVEQVWLPAARAAVATVSAMAAEAAET
+PMLSRTHGQPATPTTLGKEMAVFVHRLTRQTRRIAGQEYLGKINGATGTYAAHLAAAPDA
+DWPALSRSFVEHLGLTWNPLTTQIESHDWQAELYADVARFNRILHGFCVDVWSYISIGYF
+AQIPVAGATGSSTMPHKVNPIRFENAEANLELSCALLDSLGATLVESRWQRDLTDSTSQR
+NIGVALGHSVLALTNVTKGMGQLQVAAPVLAEDLDTNWEVLGEAVQTVMRAEAIAGVEGM
+DNPYERLKELTRGHRVDGARMREFVQGLGLSEAAQARLLELTPAGYTGVAAELAKEFGPA
+QG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000550.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000550.fa
new file mode 100644
index 0000000000000000000000000000000000000000..330d587f8997f4c2ea84ff92d67c8a8b5339d95e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000550.fa
@@ -0,0 +1,35 @@
+>0_779
+MRCGLDETEREPTVFSTNAAQEAGVPPGRLRRSDLEPWGRGLWRVRDAVPDVMDHLRALQ
+DLHPEGVFTHVTAARVLGLWLTGPLARDPAIHLGAPRHHGTGSRREGVRSHRLYGDVPVR
+IVDGVRVTATGWTFVDLAAAAATVETLVALGDSAVRSAPTERRRRDLPPGVTSLEELRGA
+VAERPRVKGIRLARDAVDLVRPGADSPQESRLRVGLVLDGVPEPQVNPRIVLSTGQWLRV
+DLAWPAARLVVEYDGDQHRTEQRQWREDRSRDAGLRADGWEVLRVTADVFRPAEWELFVR
+RVRARLGRDAAGRAAAG
+>1_1961
+MRCGLDGLLRDPTVFSTPAAREAGVSAARLRRGDVVSLGWGLWGRRGIEPDPMDHVRALQ
+DLHPEGVFSHVTAARVLGLWLTGPLAADRSVHVATPRGHGTASSRAGVRSHRLRADAPVR
+IVDGVRVTAPGWIFVDLAAQAGPLEHLVALGDSMVRTAPTEARRRRLPPGVTDVAELRAA
+VEERGRVRGIRAAREALELVRPGADSPQESRLRVRLVLDGVPEPAVNPCIRLATGQRLRV
+DLVWADAKVAVEYDGDQHRTDRRQWREDRERDAALRAEGWEVIRVTADVFRPGHWELFVR
+QLRGLVAARTPPGRVPPSWI
+>2_740
+MPRSPAPLPPMRCGLDGLLRAPTVFSTPAAREAGVSAARLRRGDVVSLGWGLWGRRGVEP
+DPLDHVRALQDLHPEGVFNHVTAARVLGLWLTGPLAADRSVHIATPRGHGTASSRAGIRS
+HRLRADAPVRIVDGVRVTAPGWTFVDLAAQAGPLEHLVALGDSMVRTAPTEARRRRLPPG
+VTDVAELRAAVEERGRVRGIRAAREALELVRPGVDSPPESRLRVRLVLDGVPEPAVNPCI
+RLATGQRLRVDLVWAEAKVAVEYDGDQHRTDRRQWREDRERDAALRAEGWEVIRVTADVF
+RPGHWELFVRQLRGLVAARTKPGRVPPSWI
+>3_1681
+MRCGLDGLLRAPTVFSTPAARETGVSAARLRRGDVVSLGWGLWGLRGVEPDPMDHLRALQ
+DLHPEGVFSHVTAARVLGLWLTGPLAADRSVHVATPRGHGTASSRAGVRSHRLRADAPVR
+IVDGVRVTAPGWIFVDLAAQAGPLDHLVALGDSMVRTAPTEARRRRLPPGVTDVAELRAA
+VEERGRVRGIRAAREALELVRPGADSPQESRLRARLVLDGVPEPAVNPCIRLATGQRLRV
+DLVWAEAKVAVEYDGDQHRTDRRQWREDRERDAALRAEGWEVIRVTADVFRPGHWELFVR
+QLRGLVAARTPPGRVPPSWI
+>4_1899
+MRCGLDGLLRAPTVFSTPAAREAGVSAARLRRGDVVSLGWGLWGRRGVEPDPMDHVRALQ
+DLHPEGVFSHVTAARVLGLWLTGPLAADRSVHIATPRGHGTASSRAGIRSHRLRADAPVR
+IVDGVRVTAPGWTFVDLAAHAGPLEHLVALGDSMVRTAPTEARRRRLPPGVTDMAELRAA
+VEERGRVRGIRAAREALELVRPGADSPQESRLRVRLVLDGVPEPAVNPCIRLATGQRLRV
+DLVWADAKVAVEYDGDQHRTDRRQWREDRERDAALRAEGWEVIRVTADVFRPGHWELFVR
+QLRGLVAARTPPGRVPPSWI
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000555.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000555.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d30afe7a6ad96db35cde7c0d5f150aa93cea885d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000555.fa
@@ -0,0 +1,30 @@
+>0_810
+MTVADGVAEVRLNAPKKMNSLDEAALADLHEAYRRAAAGVESGEVRAVLLHGEGRGFCAG
+RDISAVDPAEDDATAYLRDKVTPVLRAMSEIGVPTFAAVQGACLGVGLGLAIATDVVYVA
+EDAKIGSPFANLGATLDSGGHWLFTERLGAHRTLDLIYTAELISGEEAVRAGLFSRSVPA
+DELLEFTRAKAAKAAQGATLAFRASKELVRQIRDERVGLWESLDAENIAQGDLCNTADYA
+EGFKAFQEKRRPEFTGRG
+>1_1952
+MIEITVENGVAEIVLDAPQRMNALDEAALAELQAAYERAAAGVESGEVRAVLLRGEGRGF
+CAGRDISAVVPAEDDATAYLRDRVTPVLRAMSEIPVPTFAAVQGACLGVGLGLAIATDVV
+YVAKDAKIGSPFANLGATLDSGGHWLFTERLGAHRTLDLIYTAELLSGAEAVQAGLFSRA
+LPADELLEFTRAKVAQVASGATLAFRASKELVAQVRDRRVGLWESLDAENIAQGELCGTA
+DYAEGFQAFQEKRKPEFTGRG
+>2_748
+MIELAIADRVAVITLNAPQKMNSLDEQALADLADAYAQASAGAESGEVRAILLRGEGRGF
+CAGRDISNVVPADDDATAYLRDKVTPVLKAISEAPVPTFAAVQGACLGVGLGLAIASDVV
+YVAENAKIGSPFANLGATLDSGGHWLFTERLGAHRTLDLIYTAELISGAEAVQAGLFSRA
+VPAEELDGFTREKVAKVADGATLAFRASKELVRQIRDRRVGLWESLDAENVAQGELCDTA
+DYAEGFTAFQEKRKPEFTGRP
+>3_1673
+MIEITVENGVAEIVLDAPQRMNALDEAALAELQAAYERAAAGVESGEVRAVLLRGEGRGF
+CAGRDISAVVPAEDDATAYLRDRVTPVLRAMSEIPVPTFAAVQGACLGVGLGLAIATDVV
+YVAEDAKIGSPFANLGATLDSGGHWLFTERLGAHRTLDLIYTAELLSGAEAVQAGLFSRA
+LPADELLEFTRAKVAQVASGATLAFRASKELVAQVRDHRVGLWESLDAENIAQGELCGTA
+DYAEGFQAFQEKRKPEFTGRG
+>4_1891
+MIEITVENGVAEIVLDAPQRMNALDEAALAELQAAYERAAAGVESGEVRAVLLRGEGRGF
+CAGRDISAVVPAEDDATAYLRDRVTPVLRAMSEIPVPTFAAVQGACLGVGLGLAIATDVV
+YVAEDAKIGSPFANLGATLDSGGHWLFTERLGAHRTLDLIYTAELLSGAEAVQAGLFSRA
+LPADELLEFTRAKVAQVASGATLAFRASKELVAQVRDHRVGLWESLDAENIAQGELCGTA
+DYAEGFQAFQEKRKPEFTGRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000563.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000563.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0a62cf726b883d3a3c6babf9813f6fc49946c9ca
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000563.fa
@@ -0,0 +1,30 @@
+>0_819
+MAEDDGGPAPAREGAPSQTLSRALALLEAVVEAAEPPTIAELADGLGVHRSVAYRVLRTF
+EAHGLLRRDPLGRVHSAPGLAVLARRVEQDLRTAAMPHLSAVSADLGMTAFLVVGDGSTC
+LTLATVEPPRGNLVTQRPGTRHPLGIGAPGMAVALALPEQEWEQRRGDAAPERPELGEAR
+ERGWAVSRDEVITGVSSVAVPLSVPGQLPAALAVVYATRPEDPERLGGRLKEAAQAVAAS
+LGAA
+>1_1943
+MAEHDGGPVREGAPSQTLSRALTLLEAVVEAPEPPTIADLADGLGVHRSVAYRMLRTFET
+HGLLRRDGLGRVHAAPGLAVLARRVEQDLRAAAMPHLTAVSTDLGMTAFLVVWDGAHCLT
+LATAEPPSGNLVTQRPGTRHPLGVGAPGMAIAVALTGQEWARLPGEAAPERPELDDVRER
+GWAVSSDEVITGVSSVAVPLRVPGQLPAALAVVYATRPEDPARLGDRLGEAARAVAVAFG
+AA
+>2_757
+MDPHDDSVPAVSAPPPSAPGVRPGAPSQTLSRALTMLELVADRPTPPSIAELADDLGVHR
+SVAYRMLRTFEVHGLLRRDAAGLVHGAPGLVTLAGGVEQDLRAAAVTELSRVSDALAMTA
+FLVVWDGRDCLTLATVEPPRGNLVTQRPGTRHPLGVGAPGIAIASVLPAEGQDRPAVREA
+RARGWAASRDEVITGVGSVAAPVPAAAGMPAALAVVFTSPAVDEEAVGAELAAAARRLGA
+VLGEG
+>3_1664
+MAEHDGGPVREGAPSQTLSRALTLLETVVEAPEPPTIADLADGLGVHRSVAYRMLRTFEA
+HGLLRRDGLGRVHAAPGLAVLARRVEQDLRAAAMPHLTAVSTDLGMTAFLVVWDGAHCLT
+LATAEPPSGNLVTQRPGTRHPLGVGAPGMAIAVALTGQEWARLPGEAPPERPELDDVRER
+GWAVSSDEVITGVSSVAVPLRVPGQLPAALAVVYATRPEDPARLGDRLGEAARAVAVAFG
+AA
+>4_1882
+MAEHDGGPVREGAPSQTLSRALTLLETVVEAPEPPTIADLADGLGVHRSVAYRVLRTFET
+HGLLRRDGLGRVHAAPGLAVLARRVEQDLRAAAMPHLTAVSTDLGMTAFLVVWDGAHCLT
+LATAEPPSGNLVTQRPGTRHPLGIGAPGMAIAVALTGQEWARLPGEAPPERPELDDVRER
+GWAVSSDEVITGVSSVAVPLRVPGQLPAALAVVYATRPEDPARLGDRLGEAARAVAVAFG
+AA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000569.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000569.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f99574c7801caf77d52d7a51a828ff5978c10693
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000569.fa
@@ -0,0 +1,40 @@
+>0_844
+MSNYAGRTRTSVGTYVGQEGPVKTDNPIPTPKAEAPDVLRCASMELVVTDLEKSRQFYVD
+VLDLVVTEEDEDTVYLRSMEEFIHHNLILRKGEIAAVAAFSYRVRTPEDLDKAVAFYTEL
+GCRVERNKDGFVKGVGDSVRVEDPLGFPYEFFYEVDHVERLAWRYDLYSPGALVRLDHFN
+QVTPDVPRAARYMQDLGFRVTEDIQDENGTVYAAWMRRKPTVHDTAMTGGDGPRMHHVAF
+ATHEKHNILAICDKLGSLRMSDAIERGPGRHGVSNAFYLYLRDPDGHRVEIYTQDYYTGD
+PDNPVVTWDVHDNQRRDWWGTPVVPSWYTDASLVLDLDGNVKEVVARTDDSEMAVTIGAD
+GFSYTRAEEGEDSMPEYKKGEYKLGNQL
+>1_1933
+MTNLESRQKTSSGFFVTKEVPIDPENPLPTPTSEAPDILRSASMELVVTDLAQSREFYVD
+VLGLVVTEEDEETVYLRSMEEFIHHNLVLRQGETAAVAAFSYRVRTPEDLDKAVAFYEEL
+GCRVERRKDGFVKGVGDSVRVEDPLGFPYEFFHDVEHVERLAWRYDLYTPGALVRLDHFN
+QVTPDVPRAARYMQDLGFRVTEDIQDENGTVYAAWMRRKPTVHDTAMTGGDGPRMHHVCF
+ATHEKHNILAICDKLGALRMSDHIERGPGRHGVSNAFYLYLRDPDGHRVEVYTQDYYTGD
+PDNPVVTWDVHDNQRRDWWGTPVVPSWYTDASRVLDLDGNLQPLVSRTDDSEMAVTIGAD
+GFSYTREGQGEESLPEWKQGEYKLGNQL
+>2_783
+MSNLESRKKTSSGFFVTEEAPITPANPLPTPKAEAPDILRCASMELVVTDLAASRHFYVD
+VLGLVVTEEDEETVYLRSMEEFIHHNLILRKGETAAVAAFSYRVRTPEDLDKAVAFYTEL
+GCRVERNKDGFVKGVGDSVRVEDPLGFPYEFFFETEHVERLAWRYDLYTPGALVRLDHFN
+QVTPDVPRAAKFMQDLGFRVTEDIQDEQGTVYAAWMRRKPTVHDTAMTGGDGPRMHHVCF
+ATHEKHNILAICDKLGALRMSDHIERGPGRHGVSNAFYLYLRDPDGHRVEVYTQDYYTGD
+PDNPVVTWDVHDNQRRDWWGTPVVPSWYTDASRVLDLDGNLQPLVARTDDSEMAVTIGAD
+GFSYTREDEGEESMPEYKQGEYKLGNQL
+>3_1638
+MTNLESRQKTSSGFFVTKEAPIDPENPLPTPTSEAPDILRCASMELVVTDLAASREFYVD
+VLGLVVTEEDEETVYLRSMEEFIHHNLVLRQGETAAVAAFSYRVRTPEDLDKAVAFYEEL
+GCRVERRKDGFVKGVGDSVRVEDPLGFPYEFFHDVEHVERLAWRYDLYTPGALVRLDHFN
+QVTPDVPRAARYMQDLGFRVTEDIQDENGTVYAAWMRRKPTVHDTAMTGGDGPRMHHVCF
+ATHEKHNILAICDKLGALRMSDHIERGPGRHGVSNAFYLYLRDPDGHRVEVYTQDYYTGD
+PDNPVVTWDVHDNQRRDWWGTPVVPSWYTDASRVLDLDGNLQPLVSRTDDSEMAVTIGAD
+GFSYTREGQGEESMPEWKQGEYKLGNQL
+>4_1860
+MTNLESRQKTSSGFFVTKEVPIDPENPLPTPTSEAPDILRCASMELVVTDLAASREFYVD
+VLGLVVTEEDEETVYLRSMEEFIHHNLVLRQGETAAVAAFSYRVRTPEDLDKAVAFYEEL
+GCRVERRKDGFVKGVGDSVRVEDPLGFPYEFFHDVEHVERLAWRYDLYTPGALVRLDHFN
+QVTPDVPRAARYMQDLGFRVTEDIQDENGTVYAAWMRRKPTVHDTAMTGGDGPRMHHVCF
+ATHEKHNILAICDKLGALRMSDHIERGPGRHGVSNAFYLYLRDPDGHRVEVYTQDYYTGD
+PDNPVVTWDVHDNQRRDWWGTPIVPSWYTDASRVLDLDGNLQPLVSRTDDSEMAVTIGAD
+GFSYTREGQGEESMPEWKQGEYKLGNQL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000570.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000570.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d185c0485f2ca6d8a317fd5df61ad0eaf9be8c71
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000570.fa
@@ -0,0 +1,50 @@
+>0_845
+MTEINDRKPEGLPDLIRHYIDGQSVDSVDGDTFDVLDPVTNQPYIKAASGKTADVDKAVA
+AAKAAFESGVWSQALPRERSRVLHKIADIMETRGDQLAAMECFDTGLPIKQAKGQAARAA
+ENFRFFADLIVAQHDDTFKVPGRQINYVNRKPIGVAGLITPWNTPFMLESWKLAPAIATG
+NSVVLKPAEFTPLSASLWPGIFEEAGLPKGVFNMVHGFGEEGFAGDPLVKHPDVPLISFT
+GESRTGQIIFGNAAPHLKGLSMELGGKSPAVVFADADLDAAIDATIFGVFSLNGERCTAG
+SRILVAREVYDEFVERYAAQASRVKVGMPNDETTEVGAIVHPEHFEKVMSYVEIGKSEAH
+LVAGGGRPEGFPEGNFVQPTVFADVAPDARIFQEEIFGPVVAITPFDSDEEALELANNTK
+YGLAAYIWTNDLKRAHNFAQNVEAGMVWLNSNNVRDLRTPFGGVKASGLGHEGGYRSIDF
+YTDQQAVHINLGEVHNPVFGKQEQAAAKIDG
+>1_1932
+MTEKTSIEARKPAGLPDVLRHYIDGEFVDSIDGDTFEVLDPVTNEPYLTAASGKAADIDR
+AVAAAKRAFESGEWSQALPRQRSRVLHAIADIMETRGNQLAEMECFDTGLPIKQARGQAA
+RAAENFRFFADLIVAQHDDTFKVPGRQINYVNRKPIGVAGLITPWNTPFMLESWKLAPAI
+ATGNSVVLKPAEFTPLSASLWGGIFEEAGLPKGVFNMVHGFGEEGYAGDPLVKHPDVPLI
+SFTGESRTGQIIFANAAPHLKGLSMELGGKSPAVVFEDADLDAAIDATIFGVFSLNGERC
+TAGSRILVQRSVYDEFVERYAAQASRVKVGLPDDETTEVGAIVHPEHFEKVMSYVEIGKT
+EARLVAGGGRPEGFPEGNFVQPTVFADVAPDARIFQEEIFGPVVAITPFDTEEEALQLAN
+NTKYGLAAYIWTNDLKRAHNVAQNVEAGMVWLNSNNVRDLRTPFGGVKASGLGHEGGYRS
+IDFYTDQQAVHINLGEVHNPVFGKQEQAAAKIDG
+>2_784
+MTEKTSIAARTPEGMPDVIRHYIDGEFVDSIDGDTFDVLDPVTNEPYIKAASGKSADVDA
+AVAAAKRAFESGEWSQALPRQRSRVLHRIADIMETRGDQLAEMECFDTGLPIKQAKGQAA
+RAAENFRFFADLIVAQHDDTFKVPGRQINYVNRKPIGVAGLITPWNTPFMLESWKLAPAI
+ATGNSVVLKPAEFTPLSASLWGGIFEEAGLPTGVFNMVHGFGEEGYAGDPLVKHPDVPLI
+SFTGESRTGQIIFANAAPHLKGLSMELGGKSPAVVFEDADLDAAIDATIFGVFSLNGERC
+TAGSRILVQRSVYDEFVERYAAQASRVKVGLPDDETTEVGAIVHPEHFEKVMSYVEIGKA
+EARLVAGGGRPEGFPEGNFVQPTVFADVAPDARIFQEEIFGPVVAITPFDTEEEALQLAN
+NTKYGLAAYIWTNDLKRAHNFAQDVEAGMVWLNSNNVRDLRTPFGGVKASGLGHEGGYRS
+IDFYTDQQAVHINLGEVHNPVFGKQESKETGDA
+>3_1637
+MTEKTSIEARKPEGLPDVLRHYIDGEFVDSIDGDTFEVLDPVTNEPYLTAASGKAADIDR
+AVAAAKRAFESGEWSQALPRQRSRVLHRIADIMETRGDQLAEMECFDTGLPIKQARGQAA
+RAAENFRFFADLIVAQHDDTFKVPGRQINYVNRKPIGVAGLITPWNTPFMLESWKLAPAI
+ATGNSVVLKPAEFTPLSASLWGGIFEEAGLPQGVFNMVHGFGEEGYAGDPLVKHPDVPLI
+SFTGESRTGQIIFANAAPHLKGLSMELGGKSPAVVFEDADLDAAIDATIFGVFSLNGERC
+TAGSRILVQRSVYDEFVERYAAQASRVKVGLPDDETTEVGAIVHPEHFEKVMSYVEIGKT
+EARLVAGGGRPEGFPEGNFVQPTVFADVAPDARIFQEEIFGPVVAITPFDTEEEALQLAN
+NTKYGLAAYIWTNDLKRAHNVAQNVEAGMVWLNSNNVRDLRTPFGGVKASGLGHEGGYRS
+IDFYTDQQAVHINLGEVHNPVFGKQEQAAAKIDG
+>4_1859
+MTEKTSIEARKPQGLPDVLRHYIDGEFVDSIDGDTFEVLDPVTNEPYLTAASGKAADIDR
+AVAAAKRAFESGEWSQALPRQRSRVLHRIADIMETRGDQLAEMECFDTGLPIKQARGQAA
+RAAENFRFFADLIVAQHDDTFKVPGRQINYVNRKPIGVAGLITPWNTPFMLESWKLAPAI
+ATGNSVVLKPAEFTPLSASLWGGIFEEAGLPKGVFNMVHGFGEEGYAGDPLVKHPDVPLI
+SFTGESRTGQIIFANAAPHLKGLSMELGGKSPAVVFEDADLDAAIDATIFGVFSLNGERC
+TAGSRILVQRSVYDEFVERYAAQASRVKVGLPDDETTEVGAIVHPEHFEKVMSYVEIGKT
+EARLVAGGGRPEGFPEGNFVQPTVFADVAPDARIFQEEIFGPVVAITPFDTEEEALELAN
+NTKYGLAAYIWTNDLKRAHNVAQNVEAGMVWLNSNNVRDLRTPFGGVKASGLGHEGGYRS
+IDFYTDQQAVHINLGEVHNPVFGKQEQAAAKIDG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000571.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000571.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2b45f7126736f89c744a990f2f4d4ca9afa3a064
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000571.fa
@@ -0,0 +1,25 @@
+>0_846
+MSRTDIGTVGLAGTPVSKADRAYQAILEGIRDQRHEPGDRLVLSQIAAELGMSVVPVREA
+IRRLQSENLVAYERNVGATVVGIDPVEYRHTMETLALVEGFSTAQCAPHVTAEDLSAARE
+VNATMRAMTASEKAWDPVAFTELNRRFHSILFEHHQNEHVHDLVHRGWTRLAALRSSTFA
+YVPGRAVASVDEHEHLLRLIEDGARFEEIEAAARAHRLNTLHAYLAHQGELS
+>1_1931
+MRRTDIGTVGLAGAPVSKADRAYQAILEGIRDQRHEPGDRLVLSQIAAELGMSVVPVREA
+IRRLQSEKLVAYERNVGATVVGIDPVEYRHTMETLALVEGFSTAQCAPHVTGEDLAAARE
+VNATMRAMTESETAWDPMAFTELNRRFHSILFEHHQNEHVHDLVHRGWNRLAALRSSTFA
+YVPGRAVASVDEHEHLLRLIEDGARFEEIEAAARAHRLNTLHAYLEHSAEPSA
+>2_785
+MRRTDIGTLGLAGTPVSKADRAYQAILEGIRDQRHEPGDRLVLSQIAAELGMSVVPVREA
+IRRLQSENLVAYERNVGATVVGIDPVEYRHTMETLALVEGFSTAQCAPHVTAEDLAAARD
+VNAAMRAMTASEKAWDPVAFTELNRRFHSILFEHHQNEHVHDLVHRGWNRLAALRSSTFA
+YVPGRAVASVDEHEHLLRLIEDGARFEEIEAAARAHRLNTLHAYLEHSAEPSA
+>3_1636
+MRRTDIGTVGLAGAPVSKADRAYQAILEGIRDQRHEPGDRLVLSQIAAELGMSVVPVREA
+IRRLQSEKLVAYERNVGATVVGIDPVEYRHTMETLALVEGFSTAQCAPHVTAEDLAAARE
+VNATMRAMTESETAWDPVTFTELNRRFHSILFEHHQNEHVHDLVHRGWNRLAALRSSTFA
+YVPGRAVASVDEHEHLLRLIEDGARFEEIEAAARAHRLNTLRAYLEHSAEPSA
+>4_1858
+MRRTDIGTVGLAGAPVSKADRAYQAILEGIRDQRHEPGDRLVLSQIAAELGMSVVPVREA
+IRRLQSEKLVAYERNVGATVVGIDPVEYRHTMETLALVEGFSTAQCAPHVTAEDLAAARE
+VNATMRAMTESERAWDPVAFTELNRRFHSILFEHHQNEHVHDLVHRGWNRLAALRSSTFA
+YVPGRAVASVDEHEHLLRLIEDGARFEEIEAAARAHRLNTLHAYLEHGAEPSA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000572.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000572.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e6242f7d05a2e3bddb76f371012f4654317c5b3d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000572.fa
@@ -0,0 +1,46 @@
+>0_847
+MDENGHWVASAPQPDRSLLTPELRAKIDAVAVATLTAQLQKRGIQNATIDGPRPIHQGRR
+VLGYAKTLRYVPKREDLFKEFGGGFNAQKRAIDSVQPDDVVVMEARGEHGTGTLGDVLAL
+RAQVNGANAVITDGGIRDSAAVAEVGLQVYAGATHPAVLGRRHIPWEVGGTIACGGTTVQ
+PGDVIVGDDDGVVVIPPSLLQEVVDDAYEQELQDAWAYEQVKAGHPVDGMFPPNAEWKAT
+FDEYRKTLPDAPAPEGDA
+>1_1930
+MTQSTPEPTPTVTEHDFTVRENRPGKVLAVHLNYPSRIAQRGRPPQAPGYFLKAGTSLAR
+SGDTIERPAGTELLAYEGEIALIIGRTARRVSPEEGWSHVSGITAANDWGLYDLRHADKG
+SNVKNKSGDGYTPLGPAVISAAGLDPAALRVRTWVNGEIVQDDTTEGLVFPFGRLVADLS
+QLMTLEEGDVILTGTPAGSSVAQPGDVVEVEVDAPSAPGAPTTGRLVTTVVDSEHALAPF
+GAQPQVDDVQREEAWGSREAAGLAPQAEAASSSAVDENGHWVASAPQPDRSLLTPELRAK
+IDAIAVATLTAQLQKRGVQNATIDGPRPVHRGRRVLGYAKTLRYVPKREDLAKEFGGGFN
+AQKRAIDSVQPDDVVVMEARGEHGTGTLGDVLALRAQVNGANAVITDGGIRDSAAVAEVG
+LQVYAGATHPAVLGRRHIPWEVGGTIACGGTTVQPGDIIVGDDDGVVVIPPSLLQEVVDD
+AYEQELQDAWAYEQVKAGYPVDGMFPPNAEWKAKFAEYRKTLPDAPAPEGDA
+>2_786
+MTQNTSPATPSVTEHDFTVRQNRPGKVLALHLNYPSRIAQRGRSPQFPGYFIKAGTSIAR
+SGDAVERPAGTELLAYEGEIALIIGRTARRVRPEEGWSYVSGITAANDWGLYDLRHADKG
+SNVKNKSGDGYTPLGPAVIAAANLDPAALRVRTWVNGALVQDDTTEGLVFPFGQLVADLS
+QLMTLEEGDVILTGTPAGSSVAQPGDVVEVEVDAPTAPGAPSTGRLITHVTDSDIPMADY
+GHGPRVDDLQREEAWGSREAAGLAPVEDAPAQDDAAPASTAVDENGHWVASAPQPDRSLL
+TPELRAKIDAIAVATLTAQLQKRGIQNATIDGPRPIHQGRRVLGYAKTLRYIPKREDLFK
+EFGGGFNAQKRAIDSVQPDDVVVMEARGEHGTGTLGDVLALRAQVNGANAVITDGGIRDS
+AAVAEVGLQVYAGATHPAVLGRRHIPWEVGGTIACGGTTVQPGDIIVGDDDGVVVVPPSL
+LQEVVDDAYEQELQDAWAYEQVKAGHPVDGMFPPNAEWKAKFDEYRKTLPDAPAPEGDA
+>3_1635
+MTQSTPDPTPTVTEHDFTVRENRPGKVLAVHLNYPSRIAQRGRSPQAPGYFLKAGTSLAG
+SGDTIERPAGTELLAYEGEIALIIGRTARRVSPEEGWSHVSGITAANDWGLYDLRHADKG
+SNVKNKSGDGYTPLGPAVISAAGLDPAALRVRTWVNGEIVQDDTTEGLVFPFGQLVADLS
+QLMTLEEGDVILTGTPAGSSVAQPGDVVEVEVDAPSAPGAPTTGRLVTTVVDSEHSLAPF
+GAQPQVDDVQREEAWGSREAAGLAPQAAAPSSSAVDENGHWVASAPQPDRSLLTPELRAK
+IDAIAVATLTAQLQKRGVQNATIDGPRPIHRGRRVLGYAKTLRYIPKREDLAKEFGGGFN
+AQKRAIDSVQPDDVVVMEARGEHGTGTLGDVLALRAQVNGANAVITDGGIRDSAAVAEVG
+LQVYAGATHPAVLGRRHIPWEVGGTIACGGTTVQPGDIIVGDDDGVVVIPPSLLQEVVDD
+AYEQELQDAWAYEQVKAGYPVDGMFPPNAEWKAKFAEYRKTLPDAPAPEGDA
+>4_1857
+MTQSTPDPTPTVTEHDFTARENRPGKVLAVHLNYPSRIAQRGRSPQAPGYFLKAGTSLAR
+TGDTIERPAGTELLAYEGEIALIIGRTARRVSPKEGWSHVSGITAANDWGLYDLRHADKG
+SNVKNKSGDGYTPLGPAVISAAGLDPAALRVRTWVNGEIVQDDTTEGLVFPFGQLVADLS
+QLMTLEEGDVILTGTPAGSSVAQPGDVVEVEVDAPSAPGAPTTGRLVTTVVESEHALAPF
+GAQPQVDDVQREEAWGSREAAGLAPQAAAPSSSAVDENGHWVASAPQPDRSLLTPELRAK
+IDAIAVATLTAQLQKRGVQNATIDGPRPIHQGRRVLGYAKTLRYIPKREDLAKEFGGGFN
+AQKRAIDSVQPDDVVVMEARGEHGTGTLGDVLALRAQVNGANAVITDGGIRDSAAVAEVG
+LQVYAGATHPAVLGRRHIPWEVGGTIACGGTTVQPGDIIVGDDDGVVVIPPSLLREVVDD
+AYEQELQDAWAYEQVKAGYPVDGMFPPNAEWKAKFAEYRKTLPDAPAPEGDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000575.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000575.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9b594827aa0d209794b450ab659cedb9a854fd36
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000575.fa
@@ -0,0 +1,30 @@
+>0_850
+MPVRNRRAAALPAKLSRSWLLVNAARPEDFAPALASEADSVIFDLEAAVPEDKKDAARQH
+VVDALSGGMTAWVRIAATSTDHWQRDLEALAGVDGVRGVVLAETEEPEQVTFTAMRLRAG
+TPVIALLESALGIENATAVAKAPGTFRLAFGVNDFRKDVGVGEDPLAMAYARSRMVIASR
+VGGLPGAIDGPPGNTDGEDAVVDSSAVTASMGMTGRLVLNRDQVDWVNRAMSPSEDELAW
+ARDLLEKHAQGAAVGDGSYLPRVLRAQKIADLADSYGLWNA
+>1_1927
+MPVRNRRAAALPAKLSRSWLLVNAATPDAFAPALASEADSVIFDLEAAVPEEQKDAARRH
+VVDALSGGMTAWVRISATSTDHWQRDLEALAGLDGVRGVVLAETKEPEQVTFTAMRLRAG
+TPVIALLESALGIENATAVAKAPGTFRLAFGVNDFRKDVGVGEDPLAMAYARSRMVIASR
+VGGLPGAIDGPPGNTDGEDAVIESSAVTASMGMTGRLVLNRDQVDWVNRAMSPSEDELAW
+ARDLLEKHAQGAAVGDGSYLPRVLRAQKIADLADSYGLWNA
+>2_788
+MPVRNRRAAALPAKLSRSWLLVNAARPEDFAPGLASEADSVIFDLEAAVPEEHKDAARQN
+VIEALSGGMTAWVRISATTSEHWARDLEALEGLSGVRGVVLAETEEPEQVTFTAMRLRAG
+TPVIALLESALGIENATAVAKAPGTFRLAFGVNDFRKDVGVGEDPLAMAYARSRMVIASR
+VGRLPGAVDGPPGAGDDEAAVAASSEVTHSMGMTGRLCLNRGQVEWVNRALSPSEDELTW
+AHDLLDKHAAGAAVGDGSYLPRLRRAEKIADLADSYGLWNA
+>3_1632
+MPVRNRRAAALPAKLSRSWLLVNAATPDAFAPALASEADSVIFDLEAAVPEEQKDAARQH
+VVDALSGGMTAWVRISATSTDHWQRDLEALTGLDGVRGVVLAETEEPEQVTFTAMRLRAG
+TPVIALLESALGIENATAVAKAPGTFRLAFGVNDFRKDVGVGEDPLAMAYARSRMVIASR
+VGGLPGAIDGPPGNTDGEDAVIESSVVTASMGMTGRLVLNRDQVDWVNRAMSPSEDELAW
+ARDLLEKHAQGAAVGDGSYLPRVLRAQKIADLADSYGLWNA
+>4_1854
+MPVRNRRAAALPAKLSRSWLLVNAATPDAFAPALASEADSVIFDLEAAVPEEQKDAARQH
+VVDALSGGMTAWVRISATSTDHWQRDLEALAGLDGVRGVVLAETEEPEQVTFTAMRLRAG
+TPVIALLESALGIENATAVAKAPGTFRLAFGVNDFRKDVGVGEDPLAMAYARSRMVIASR
+VGRLPGAIDGPPGNTDGEDAVIESSAVTASMGMTGRLVLNRDQVDWVNRAMSPSEDELAW
+ARDLLEKHAQGAAVGDGSYLPRVLRAQKIADLADSYGLWNA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000577.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000577.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4f4adb5e439891c735cfa8250afdec41b4e74352
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000577.fa
@@ -0,0 +1,40 @@
+>0_854
+MLIGVPTEVKNNEFRVALTQGGVLELVRRGHEVLVQAGAGVGSGISDQVYLDAGAQLVQD
+PDELWERAELVLKVKEPQPEEYGRLRRGQVLFTYLHLAASPECTRAILDSGTTAIAYETV
+TRGRALPLLAPMSQVAGRLAPAAGAYHLLQPQGGSGVLMGGVPGTRRARVAVIGGGVAGE
+AAAVIAAGMGADVTVLDISLERLAQLDAVHQGRIRTLASSHLNIAETVADADLVVGSVLI
+PGAAAPKLVTAEMVEQMRPGSVLVDIAIDQGGCFENSRPTTHQDPTYLVGDKIYYCVSNM
+PGAVPQTSTAALTNATLPYIQRIADLGWREALAADEGFASGLNAHEGALTLPSVAEAMAG
+PLGLDPRKDARTTADVLASA
+>1_1923
+MLVAVPTEVKNNEFRVALTQGGVQELVRAGHQVLVQSGAGAGSGASDQDYRDAGAELVDD
+VDELWERAELVLKVKEPQPEEYGRLRRGQVLFTYLHLAASPACTRAILDAGTTAIAYETV
+TRGRSLPLLAPMSQVAGRLAPAAGAYHLLQPQGGSGVLMGGVPGTRRARVAVIGGGVAGE
+AAAVIAAGMGADVTVLDISLERLAQLDAVHQGRIRTLASSHLNIGETVADADLVIGSVLI
+PGAAAPKLVTAEMVESMRPGSVLVDIAIDQGGCFENSRATTHQDPTYLVGDKIYYCVSNM
+PGAVPQTSTSALTNATLPYIKRIADLGWRAALAADEGFAGGLNAHDGVLTLPSVATAVAD
+ELGLDPRKDVRVTSEVLAEA
+>2_791
+MLVAVPTEVKNNEFRVALTQGGVQELVRAGHQVLVQSGAGVGSGASDQDYRDAGAELVDD
+VDELWERAELVLKVKEPQPEEYGRLRRGQVLFTYLHLAASPACTRAILDAGTTAIAYETV
+TRGRALPLLAPMSQVAGRLAPAAGAYHLLQPQGGSGVLMGGVPGTRRARVAVIGGGVAGE
+AAAVIAAGMGADVTVLDISLERLAQLDAVHQGRMRTLASSHLNIGETVADADLVIGSVLI
+PGAAAPKLVTAEMVESMRPGSVLVDIAIDQGGCFENSRATTHQDPTYLVGDKIYYCVSNM
+PGAVPQTSTAALTNATLPYIKRIADLGWRAALAADEGFAGGLNAHDGVLTLSSVATAVAD
+ELGLDPQKDVRVTSEVLAEA
+>3_1628
+MLVAVPTEVKNNEFRVALTQGGVQELVRAGHQVLVQSGAGVGSGASDQDYRDAGAELVDD
+VDELWERAELVLKVKEPQPEEYGRLRRGQVLFTYLHLAASPACTRAILDAGTTAIAYETV
+TRGRSLPLLAPMSQVAGRLAPAAGAYHLLQPQGGSGVLMGGVPGTRRARVAVIGGGVAGE
+AAAVIAAGMGADVTVLDISLERLAQLDAVHQGRIRTLASSHLNIGETVADADLVIGSVLI
+PGAAAPKLVTAEMVESMRPGSVLVDIAIDQGGCFENSRATTHQDPTYLVGDKIYYCVSNM
+PGAVPQTSTSALTNATLPYIKRIADLGWRAALAADEGFAGGLNAHDGALTLPSVATAVAD
+ELGLDPQKDVRVTSEVLAEA
+>4_1850
+MLVAVPTEVKNNEFRVALTQGGVQELVRAGHQVLVQSGAGAGSGASDQDYRDAGAELVDD
+VDELWERAELVLKVKEPQPEEYGRLRRGQVLFTYLHLAASPACTRAILDAGTTAIAYETV
+TRGRSLPLLAPMSQVAGRLAPAAGAYHLLQPQGGSGVLMGGVPGTRRARVAVIGGGVAGE
+AAAVIAAGMGADVTVLDISLERLAQLDAVHQGRIRTLASSHLNIGETVADADLVIGSVLI
+PGAAAPKLVTAEMVESMRPGSVLVDIAIDQGGCFENSRATTHQDPTYLVGDKIYYCVSNM
+PGAVPQTSTSALTNATLPYIKRIADLGWRAALAADEGFAGGLNAHDGVLTLPSVATAVAD
+ELGLDPRKDVRVTSEVLAEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000590.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000590.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f903b89c681528842adfda5330ca6f72575349d7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000590.fa
@@ -0,0 +1,40 @@
+>0_874
+MPLRASSVPRGIDMQLYRRIHWGDLATFHLLGTRQYRSDQANLDLVKVVDADARDPRRTI
+TGAAQEAWLREGFETSVARWDLITQQVPFVQYDRISGPLLWGDMDSWDGYVASRDRVVSA
+WTAAGVRNPVVLTGDIHEAFASDIKRDFNDLSSESVGVELITTSITSGGDGSDAAAEALA
+WNPHIKFNNDLRGYLRVDLSAHMLEARFRVVDYVSELGSSVRTRAVFGVGDGEHRLHRIA
+>1_1903
+MTSHTDPSHPAAHPVSRRTLLGGAGLVVASAALLSTPAGTAHAATGPTPFTLGVASGDPW
+PDGVVLWTRLAVDPLALDGLGGMPDQSFRVEYQVATDEGFRKVVRSGAVTTDRAQGYAVH
+VTLTGLRPGTEYFYRFRALGHLSRVGRTVTAPARGSNPSRLTMTVASCANWEHGYFTAYG
+HMAAERPDLMVHLGDYYYEIMPYGYPVSSGVPRAHRNGESRTLAQYRARMAQYKTDPHLQ
+DAHAAAPWLVIFDDHELENNWADETPEIWDPSFLARRAAAFQAYYENMPLRASSVPRGID
+MQLYRRIHWGDLATFHLLDTRQYRSDQANLDLVKVVDADARDSRRTITGAAQEAWLREGF
+ETSVARWDLITQQVPFVQYDRTSGPLLWGDMDTWDGYVASRDRVVSAWTAAGVRNPVVLT
+GDIHEAFASDIKQDFNDLSSESVGVELITTSITSGGDGSDAAAEALAWNPHIKFNNDLRG
+YLRVDLSAQLLEARFRVVDYVSELGSSVRTRAVFGVGDGEHRLHRIA
+>2_422
+MSSPSPTLSRRRLLGLSGASAAVLALGVNAPDAAHAEPLPQRDGLFGLGVASGYPRPDGA
+VLWTRLAPEPLAENGHGGMPLRSVPVKWEVARTADFRRIVARGTALAQPELAHSVHPRVE
+GLAPGTEHFYRFVVGPQTSPVGRFVTLPAAGAATDDYTVGLISCQAWYHGHFAAHRHLAQ
+EEDLDLTVFLGDYIYEYGITAANLWRQGAEVTPAHAVEIETLEQYRLRYALTKSDPHLQA
+LHARAAAVAIWDDHEVQNNYVGAASSTGIPEELFAHRIAVAYRAFYENLPVDIDALPEGP
+ESDIVAGLDVGALARISLLDTRQFRDAPPADAADRERENRTMLGAAQERWVTERLRTSQS
+QWNVLAGGVVLAPISDDRTDQWDGYPAARRRLLTEMKRAGNAVMLTGDIHKHVAAELRGE
+SAGLPAGPAGVELVTTSAASDGDGAKTDKYTPDWVRHDYVRHYDGRRGYLHLRFTPAQLT
+SSFWVVPWVESDDTAPKELSARFTTPAGSSRLIEA
+>2_815
+MAAAALISTPAGTAHAAAGPNPFTLGVASGDPWPDGFVIWTRLATMPLNRDGFGGMPDAS
+FTVEWQVSRHADFRSTVRTGTTTTSRAQGYAVHVTLTGLRAGTEFFYRFRCNGHLSRTGG
+AVTAPALGSMPGHLTATEAERLIRAAGFAPVRLGGIDESIRMEVTGELHPFGGLDGTLPT
+TANVEQLRG
+>4_1830
+MSSHTDPAHPTAHPVSRRTLLGGAGLVVASAALLSTPAGTAHAATGPTPFTLGVASGDPW
+PDGVVLWTRLAVDPLALDGLGGMPDQSFRVEYQVATDEGFRKVVRSGAVTTDRTQGYAVH
+VTLTGLRPGTEYFYRFRALGHLSRVGRTVTAPARGSNPSSLTMTVASCANWEHGYFTAYG
+HMAAERPDLMVHLGDYYYEIMPYGYPVSSGVPRAHRNGESRTLAQYRARMAQYKTDPHLQ
+DAHAAAPWLVIFDDHEVENNWADETPEIWDPNFLARRAAAFQAYYENMPLRASSVPRGID
+MQLYRRIHWGNLATFHLLDTRQYRSDQANLDLVKVVDADARDSRRTITGAAQEAWLREGF
+ETSVARWDLITQQVPFVQYDRSSGPVLWGDMDSWDGYVASRDRVVSAWTTAGVRNPVVLT
+GDIHEAFASDIKQDFNDLSSESVGVELITTSITSGGDGSDAAAEALAWNPHIKFNNDLRG
+YLRVDLSAQLLEARFRVVDYVSELGSSVRTRAVFGVGDGEHRLHRIA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000604.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000604.fa
new file mode 100644
index 0000000000000000000000000000000000000000..10cc42ba08e005f38afdbdcf4c8f80e5e1575d20
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000604.fa
@@ -0,0 +1,45 @@
+>0_906
+MSAAQPVGAAPTPSAAGPVSDWDIRRPHRMWPRMLVIVLTLAGLVLLVQFFQGIASIAAP
+VFLGLNLVIVAYPLQAWLIRRGVHPVLGAAASVVVVVAVLGAFVGMIVWSGLELVAELPK
+YSGQFQQIVLDVSNWLNARGVTPDMVSQQLASIDVSAVTSAAVSALTKIATNLYAVLGLL
+VTVVMGMFFLAMDSMDVERRVRLLSTARLELGEALIDFAHGVRRYWVVTTVFGLIVAALD
+VIALVLIGVPLALVWGVLSFLTNYIPNVGFIIGLIPPAILGLAAGGWTSFLWVVVSYSVL
+NFVLQSVIQPKVAGDAIGVIPTVSFLSLLFWAWVLGPLGAILALPCTLLAKAVLIDADPN
+SRWVNSLIASDLKGMERRQHSLLERLRVGRRGEGRAGKADAEAVAGADVAAAGVEAALDV
+DDAAAGARRPEAAPTGSTLTEPARTEPGPAAPADAADGPGLTGGAAPAPGR
+>1_1873
+MSAAQPAGVTPPPASSSPASDWDIRRPHRMWPRMLVIVLTLAGLVLVVQFFQGIASIAAP
+VFLGLNLVIVAYPLQAWLIRRGLHPVLGAATTVLLVVAVMAVFGGMMVWSGLELVAELPK
+YADRFQQIVLDVSHWLNERGVTPDMVSQQLASIDMSAVTGTAVSAITKIATNVYAVFGLL
+VTVIMGMFFLAMDSMDVERRVRLLSTARHEFGHALVEFAQGVRRYWVVTTVFGLIVAVLD
+VIALMLIGVPLALVWGVLSFLTNYIPNIGFIIGLLPPAVLGLAAGGWSDFLWVVVSYSVL
+NFVLQSVIQPKVAGDAIGVIPTVSFLSLLFWAWVLGPLGAILALPCTLLAKAVLIDADPN
+ARWINALIASDLKGMERRQSSLLERLRPAAWRSDAHGKDEDRAPTDGGDDDGPATDEVTG
+GAGAAPGR
+>2_841
+MSASAPPAVTGTSTPATEWDNRRPHRMWPRMLVIVLTLAGLVVLVQFFQGIASIAAPVFL
+GLNLVIVAYPLQAWLIRRGLHPVLGAATTVVVVCAVIAAFLGMIAWSGMELLTELPKYAG
+QFQQIMHDASQWLSDHGVTPDMVNQQLASVDMSAVTGAAVSALTTIASNLYAVLGLLITV
+IMGMFFLAMDSMAVERRVRLLSTARHELGQALIDFADGVRRYWIVTTVFGLIVAVLDMVA
+LVIIGVPLALVWGVLSFLTNYIPNVGFIIGLVPPAILGLAAGGWPAFLWVVVSYSVLNFV
+LQSIIQPKVAGDAVGVIPTVSFLSLLFWAWVLGPLGAILALPCTLLVKAVLIDADPNSRW
+VNSLIASDLKGMERRQSSMLERLRLPRELIRHGGSTASHATAADVQGDDDVAPERTAEDA
+APAQDRRRVRAAAQEARLEGPPPSTLRAPRVDLPGEPEPATADGSAPPEAGAAPGR
+>3_1580
+MSAAQPAGVTPPSASSSPASDWDIRRPHRMWPRMLVIVLTLAGLVLVVQFFQGIASIAAP
+VFLGLNLVIVAYPLQAWLIRRGLHPVLGAATTVLLVVAVMAVFGGMMVWSGLELVAELPK
+YADRFQQIVLDVSHWLNERGVTPDMVSQQLASIDMSAVTGTAVSAITKIATNVYAVFGLL
+VTVIMGMFFLAMDSMDVERRVRLLSTARHEFGHALVEFAQGVRRYWVVTTVFGLIVAVLD
+VIALMLIGVPLALVWGVLSFLTNYIPNIGFIIGLLPPAILGLAAGGWSDFLWVVVSYSVL
+NFVLQSVIQPKVAGDAIGVIPTVSFLSLLFWAWVLGPLGAILALPCTLLAKAVLIDADPN
+ARWINALIASDLKGMERRQSSLLERLRPAAWRSDAHGGDEDRASADGGDDDGPATDEVTG
+EAGAAPGR
+>4_1793
+MSAAQPAGVTPPPASSSPASDWDIRRPHRMWPRMLVIVLTLAGLVLVVQFFQGIASIAAP
+VFLGLNLVIVAYPLQAWLIRRGLHPVLGAATTVLLVVAVMAVFGGMMVWSGLELVAELPK
+YADRFQQIVLDVSHWLNERGVTPDMVSQQLASIDMSTVTGTAVSAITKIATNVYAVFGLL
+VTVIMGMFFLAMDSMDVERRVRLLSTARHEFGHALVEFAQGVRRYWVVTTVFGLIVAVLD
+VIALMLIGVPLALVWGVLSFLTNYIPNIGFIIGLLPPAVLGLAAGGWSDFLWVVVSYSVL
+NFVLQSVIQPKVAGDAIGVIPTVSFLSLLFWAWVLGPLGAILALPCTLLAKAVLIDADPN
+ARWINALIASDLKGMERRQSSLLERLRPAAWRSDAHGGDEDRASADGGDDEGPAADEVTG
+EAGAAPGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000610.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000610.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f3c1d153a8e11addde435b9d01de0e213380732e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000610.fa
@@ -0,0 +1,20 @@
+>0_915
+MTLTLDDRTRVWDTDLSHHNLRSGLSAFPTGVVAVAGLAEDRREVMVSSSFGVGISWEPA
+LVAFSAQNTSRTWPRLRQAASLGISLLAADQTHLCRQLASREGDRFAGLDVHVSPNEALL
+IEGAALWLETRLHAEVPAGDHTVVMLEVTGFADHTDEVAPAALHRNLFHGLRAL
+>1_1866
+MTLTHEPHTAAWDTDLSLGNLRSGLSAFPTGVVALAGLADDVPEVMVSSSFGVGISWEPA
+LVSFSAQNSSRTWPRLRRAGAIGVSLLAADQTPLCRQLASREGDRFAGLDVHRSPHDALL
+IGGSSLWLETRVHAEVPAGDHTVVLLEVTAFADHTDAAPPAALHRNLFHGLRAL
+>2_847
+MTLIHAPHTAAWDTDLSLGNLRSGLSAFPTGVVALAGLADDVPEVMVSSSFGVGISWEPA
+LVSFSAQNSSRTWPRLRRAGAIGVSLLAADQTPLCRQLAAREGDRFAGLDVHRSPHDALL
+IGGSSLWLETRVHAEVPAGDHTVVLLEVTAFADHTDDAPPAALHRNLFHGLRAL
+>3_1573
+MTLTHEPHTATWDTDLSLGNLRSGLSAFPTGVVALAGLADGVPEVMVSSSFGVGISWEPA
+LVSFSAQNSSRTWPRLRRAGAIGVSLLAADQTPLCRQLASREGDRFAGLDVHRSPHDALL
+IGGSSLWLETRVHAEVPAGDHTVVLLEVTAFADHTDAAPPAALHRNLFHGLRAL
+>4_1786
+MTLTHEPHTAAWDTDLSLGNLRSGLSAFPTGVVALAGLADDVPEVMVSSSFGVGISWEPA
+LVSFSAQNSSRTWPRLRRAGAIGVSLLAADQTPLCRQLASREGDRFAGLDVHRSPHDALL
+IGGSSLWLETRVHAEVPAGDHTVVLLEVTALADHTDAAPPAALHRNLFHGLRAL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000623.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000623.fa
new file mode 100644
index 0000000000000000000000000000000000000000..eef32cbe7ede7361808209ec4145110e240be133
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000623.fa
@@ -0,0 +1,23 @@
+>0_933
+MAAAPAASDASTPASAGSGAGTGEASEAPAEQGSAEAGESAEAGALPAWVWAVGVAGLLV
+LVVALILMGRRARALGHLDDGR
+>1_1845
+MHHQTTPVRRAARAATGLTLLPALVVAGAAPAAAHDELIRTAPAVGETATTAPSEVSLTF
+SGELIDGEGIQNLLQVRDADGNQWQSAAGTVDGSTFSAPLCEGLPNGDYEVAYRVVYSDG
+HSEERSFDFAVDDPAAPAAGTAPQGCGTAVAGASTAASPEAAAGQGDAASAEATAQADAS
+DAAQPADTDALPAWVWVAGIAGLAVLVVAFLLMGRRARALGHLDDGR
+>2_874
+MNPTPMHPSTPRRAARAAAALTLLPGLAVAAAAPALAHDELLKAVPADGAALAEAPDAVS
+LTFSGDLISGQGIQSIVRVTDAAGNQWQKGDVQVSGPTLTAPLCPDLAQGEYTAAYRVVY
+SDGHSEEQSLDFSVTDPSAPAAGTAPSGCGVAAAGTASSTAAPASSAEQTGAEQSGAAST
+PAAASSTPAESGASAGVPATVWMLGAAGVAVIAVGLAVMGRKARALGRD
+>3_1552
+MHHQTTPVRRAARAAAGLALLPALVVAGAAPAAAHDELIRTAPAVDETVTTAPSEVSLTF
+SGELIDGEGIQNLLQVRDADGNQWQSAAGTVDGPTFSAPLCEGLPNGDYEVAYRVVYSDG
+HSEERSFDFAVDDPAAPAAGTAPQGCGSAVAGASIAASPEATASQGDAASAAATAQADAS
+HAAQPADSDALPAWVWVAGIAGLAVLVVAFLLMGRRARALGHLDDGR
+>4_1766
+MHHQTTPVRRAARAAAGLTLLPALVVAGAAPAAAHDELIRTAPAVGETATTAPSEVSLTF
+SGELIDGEGIQNLLQVRDADGNQWQSAAGTVDGPTFSAPLCEGLPNGDYEVAYRVVYSDG
+HSEERSFDFAVDDPAAPAAGTAPQGCGTAVAGASTAASPEATAGQGDAASAEATAQADAS
+DAAQPADSDALPAWVWVAGIAGLAVLVVAFLLMGRRARALGHLDDGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000624.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000624.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f1fc3a378290eb23e8d574aff0ecc452faa30dca
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000624.fa
@@ -0,0 +1,25 @@
+>0_934
+MTTPRSARCLSAAAVMAAAALGLTACAGGADDAASSSSSAPTAATSSAPAEGQGAPLTVS
+DPWTKATEDGMTGSFGLLENSSDEDLHVVGVSAEVGAKAGLHVMVADEDGQMVMQQSPDG
+FTVPAGGSFELAPGGAHVMLMGLTEPIEPGEEVAYELELEDGSTVEVVSVARPYTGANES
+YDGGEAEESDEHADH
+>1_1844
+MTTTSPRAPRRLGAAAVLAVAALGLTACAGDDAGSAPSASDASSVAPATDAAPASDASPA
+ASTADGQAAGLTITDPWTKATEEGMTGSFGMLENSSDQDLHIVGVRSELGETVELHEMVS
+GEDGQMVMQESPDGFTVPAGGSLELAPGGNHVMFMGLTDPIEPGEDVTYDLELEDGSTLE
+VTSVVRPFTGANESYHGGQSHESEDHADH
+>2_875
+MTMKHPSQTVSRRLSLAALAAAGSLALAACGGASAPASSSSSAAASSATATTPEAAGSAA
+SSSATAADSSAAPLTMTDAWTKATDGAMTGSFGTLENTSDAPVHVVAVTSDRTDRVELHE
+MAADGKGQMTMQQSPDGFTVPAGGTFELVPGGDHVMFMGLTQPVKAGAEVSYTLKTEDGR
+TLEVTSVARPFTGADESYHGGEASSSMSGMGMNSSMPAGSGHADH
+>3_1551
+MTTTSPRAPRRLGAAAVLAVAALGLTACAGDDAGSAPSASDASSVAPATGASSAASTADG
+QAAGLTITDPWTKATEEGMTGSFGMLENSSDQDLHIVGVRSELGETVELHEMVSGEDGQM
+VMQQSPDGFTVPAGGSFELAPGGNHVMFMGLTDPIEPGEDVTYDLELEDGSTLEVTSVVR
+PFTGANESYHGGESHESEDHADH
+>4_1765
+MTTTSPRAPRRLGAAAVLAVAALGLTACAGDDAGSAPSASDASSVAPATDASPAASTADG
+QAAGLTITDPWTKATEEGMTGSFGMLENSSDQDLHIVGVRSELGETVELHEMVSGEDGQM
+VMQQSPDGFTVPAGGSFELAPGGNHVMFMGLTDPIEPGEDVTYDLELEDGSTLEVTSVVR
+PFTGANESYHGGDSHESEGHADH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000631.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000631.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a6dcbf25c48b89cb4c907314fdadeecb2a66df9b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000631.fa
@@ -0,0 +1,25 @@
+>0_946
+MLLSDQDIRAELASGRVGLDPLDEAMVQPASVDVRLDRFFRLFDNHRYAHIDPRQEQDEL
+TRLVEVDPDEAFILHPGEFVLGSTYEQVTLPDDLAARLEGKSSLGRLGLLTHSTAGFIDP
+GFTGHVTLELSNVATLPITLWPGMKIGQLCFFRLSSPAASPYGTGANQNRYQGQRGPTAS
+RAHLDFHLTRIDR
+>1_1832
+MLLSDRDIRAELDSGRVGLDPLDPAMVQPASVDVRLDRFFRLFDNHRYAHIDPRQKQDEL
+TRLVEVDPDEAFILHPGEFVLGSTYEQVTLPDDLAARLEGKSSLGRLGLLTHSTAGFIDP
+GFSGHVTLELSNVATLPITLWPGMKIGQLCFFRLSSSAQSPYGTGANQNRYQGQRGPTAS
+RAHRDFHLTRIER
+>2_885
+MASVLLSDRDIRAELSSGRIGLDPLELSMVQPASVDVRLDRFFRLFDNHRYAHIDPAQPQ
+EELTRLVEVEPDQPFVLHPGEFVLGATYEQITLPDDVAARLEGKSSLGRLGLLTHSTAGF
+VDPGFTGHVTLELSNVATLPITLWPGMKIGQLCFFRMSSPAESPYGSGGNLNRYQGQRGP
+TASRSHQDFHLTRIPR
+>3_1539
+MLLSDRDIRAELDSGRVGLDPLDPAMVQPASVDVRLDRFFRLFDNHRYAHIDPRQEQDEL
+TRLVEVDPDEAFILHPGEFVLGSTYEQVTLPDDLAARLEGKSSLGRLGLLTHSTAGFIDP
+GFSGHVTLELSNVATLPITLWPGMKIGQLCFFRLSSAAQSPYGTGANQNRYQGQRGPTAS
+RAHRDFHLTRIE
+>4_1753
+MLLSDRDIRAELDSGRVGLDPLDPAMVQPASVDVRLDRFFRLFDNHRYAHIDPRQEQDEL
+TRLVEVDPDEAFILHPGEFVLGSTYEQVTLPDDLAARLEGKSSLGRLGLLTHSTAGFIDP
+GFSGHVTLELSNVATLPITLWPGMKIGQLCFFRLSSSAQSPYGTGANQNRYQGQRGPTAS
+RAHRDFHLTRIER
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000632.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000632.fa
new file mode 100644
index 0000000000000000000000000000000000000000..679b8741e35a5bee403051406e32895ae55cf36d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000632.fa
@@ -0,0 +1,45 @@
+>0_947
+MPGMDPAASAVPDAALPRLATAAPRRQVVAWALWDWGSAAFNAVMVTFVFGTYLASDAFG
+PDERGTAWLSTALAVAGVVIALTAPVMGRRADGAGRRRLWLGVMTAAVIACTTACFLVTP
+QESSLLLGVTMIALGTVFFEFAEVQVNAILVQISTPATIGRISGIGWGAGYLGGILLLLI
+VFVGFVSGDAHWFGITGDEALNIRVVALVAAAWFLVFAIPVLVAVPDPAPAPTPGGGPRR
+ESLAASYRALGSTLARMWRQDRNTLWFLVSSAVFRDGVGAVFVYGAILGTTVYGLAASDV
+ILFAIVANVVAAAGAFAGGRLDDAIGPRRVILGSLAAMVLVAAGLALASGTLAFWIGGLA
+LCLFVGPVQSASRAFLGRLTTERTAGEVFGLYATTGRAVGFITPMLVTLALAAVPDNRVV
+IPVIVLVLIVGGVLFARVTDPVTRSAEPAP
+>1_1831
+MTDVALPPVASAAPRRQVAAWALWDWGSAAFNAVMVTFVFGTYLASDAFGPDERGTAWLS
+TAMAVAGVVIAVTAPVLGRRADGAGRRRLWLALTTGAVIACTAACFWVTPEESSLLLGVT
+LIALGTVFFEFAEVQVNAILVHISTPATIGRISGIGWGAGYLGGILLLLIVFVGFVSGDA
+HWFGVTEDAALNIRVVALVAAAWFLVFAIPVLVAVPDPAPAPAADGGPRRESVLGSYREL
+GATLARMWREDRNTLWFLVASAVFRDGVGAVFVYGAILGTTVYGLAASDVILFAIAANVV
+AALGAFVGGRLDDAVGPRRVILGSLAAMVLVAGALFFASGTLAFWVGGLALCLFVGPVQS
+ASRAFLGRLTTPRTAGEVFGLYATTGRAVGFITPALVTLALALHPDNRVVIPVIAVVLVA
+GGLLFARVTEPITRSAESVR
+>2_886
+MPRMSSPAPHAAPQPCPAPHGGAGPAPARVPRGRVVAWAAWDWGSAAFNAVMVTFVFGTY
+LASDAFGPDDRGTQWLSAANALAGVVIALTAPALGRLADGTGRRRLWIALTTGAVIACTA
+ACFLVTPEESMLGLGVTLIALGTVFFEIASVHINAILLQISTPATIGRVSGFGWGAGYLG
+GIVLLLIVFVGFVSGDDHWFGVGEERALNIRVVALVAAAWFLVFALPVLAASPEPPAARG
+ADGSPRRESLVESYRGLGRTLARMWRQDRLTLRFLAASAVFRDGVGAVFVYGAILGTTLY
+GLAAQDVVLFAIVANVVAALGAFAGGRLDDALGPRRVILGSLAAMVVVAAALVLAEGTAA
+FWAGGLALCLFVGPVQSASRAFLGRLTVPETAGEAYGLYATTGRAIGFITPALVSAALAV
+WGDSRVIIPVIALVLLAGGALLLGVREPEGPTVAGARPGTGPRAAR
+>3_1538
+MTDVALPPVASAAPRRQVAAWALWDWGSAAFNAVMVTFVFGTYLASDAFGPDERGTAWLS
+TAMAVAGVVIAVTAPVLGRRADGAGRRRRGLGLTTGAVIACTAACFWVTPEESSLLLGVT
+LIALGAVFFEFAEVQVNAILVHISTPATIGRISGIGWGAGYLGGILLLLIVFVGFVSGDA
+HWFGVTEDEGLNIRVVALVAAAWFLVFAIPVLVAVPDPAPAPSPGGGPRRESLAASYRAL
+GSTLARMWREDRNTLWFLLSSAVFRDGVGAVFVYGAILGTTVYGLAASDVILFAIAANVV
+AALGAFVGGRLDDAVGPRRVILGSLAAMVLVAGALFFASGTLAFWVGGLALCLFVGPVQS
+ASRAFLGRLTTPRTAGEVFGLYATTGRAVGFITPALVTLALALHPDNRVVIPVIAVVLVA
+GGLLFARVTEPITRSAESVR
+>4_1752
+MTDVALPPVASAAPRRQVAAWALWDWGSAAFNAVMVTFVFGTYLASDAFGPDERGTAWLS
+TAMAVAGVVIAVTAPVLGRRADGAGRRRRGLALTTGAVIACTAACFWVTPEESSLLLGVT
+LIALGTVFFEFAEVQVNAILVHISTPATIGRISGIGWGAGYLGGILLLLIVFVGFVSGDA
+HWFGVTEDAALNIRVVALVAAAWFLVFAIPVLVAVPDPAPAPAADGGPRRESVLGSYREL
+GATLARMWREDRNTLWFLVASAVFRDGVGAVFVYGAILGTTVYGLATSDVILFAIAANVV
+AALGAFVGGRLDDAVGPRRVILGSLAAMVLVAGALFFASGTLAFWVGGLALCLFVGPVQS
+ASRAFLGRLTTPRTAGEVFGLYATTGRAVGFITPALVTLALALHPDNRVVIPVIAVVLVA
+GGLLFARVTEPITRSAESVR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000639.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000639.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5dd5f1ca3b908a718bc14e1b417e7c92eb670617
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000639.fa
@@ -0,0 +1,15 @@
+>0_954
+MNTLAQKALSTGITLVGGIIGSRVVAGGWKLVTGHDAPDDAADETLPIVEALSFAFISAG
+VAAILKVAGQRGAGAALRKVTESTAHRVDNEV
+>1_1824
+MNTLAQKALSAGITLVGGIVGSRVVAGGWRLVTGHSAPNDAADETLPLIEALSFAFISAG
+VAALLKVAGQRGAGAAIRKVSESTAHRVDHEV
+>2_893
+MDKVIQKVLATGITVVGGIVASRLVAGGWKLVTGHDAPSDATDETVPLVEALAFTFASAG
+IASVLKVAGQRAAAEGVRKVAQKTSSDVDNEV
+>3_1531
+MNTLVQKALSAGITLVGGIVGSRVVAGGWRLVTGHSAPDDAADETLPLVEALSFAFISAG
+VAALLKVAGQRGAGAAIRKVSESTAHRVDHEV
+>4_1745
+MNTLAQKALSAGITLVGGIVGSRVVAGGWRLVTGHSAPNDAADETLPLIEALSFAFISAG
+VAALLKVAGQRGAGAAIRKVSESTAHRVDHEV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000641.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000641.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0bbfbfe638434955c6f619b8ba6286efc20c869f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000641.fa
@@ -0,0 +1,99 @@
+>0_956
+MAKLLYRLGLGAARRPLTVILAWVLALALAVGGFLAFGGTLSTNVTIPGTPTAQVTDRLQ
+DEFPEASRGMGQVVFTTEDGQPFTDAQRDAVAALLDEVAGQDAVDAVVDPFEVQAQQDDA
+RTALADGRQEIADGEQALVDGREQVDAGRAEIEEGRAQADAGEQELADAAAQLEDGQVQL
+DAARADIEARGLDALPAEALAPLREAEQQIADGQAELDAGRAEIEEQAARLAAGQAEIDA
+NREQLEAGQAELDARWGELDAAQAQLDAQREELEAGRAQLEQALAAALEQAEAAGIPAEQ
+VTAQFAEQQAQLEAGQAQLDAAQEQADAGREQLVAAQAEADAGAEQLAEAQAQADAGAEQ
+LAAGREQLEAAEAELESGREQLAAGRQQALDAAAAELDAQQARIDEGRAQHEQGVADLEA
+GRAELAAGAERLDQAEADLATGRTELEDGRVAAERGERSLALVGGYRSVSEDGSTAVGIV
+SFSQPSLDVTAEEKEAVTGALTGADIDGVAVHPSQELNATVPSILGPGEVVGLIVAAIVL
+VVMLGTLVGAGLPLVNALVGVGVGAAGALAFSSVVEMISVTPVLGVMLGLAVGIDYALFI
+VNRHRQELKRGTALHEAIALANGTSGNAVVFAGITVIIALVALNVTGIGFLGLMGTVGAV
+CVAVAVLVAVTLTPALLSLAGTRILSRKERARLADEGPASAAEGSAAVRRAGRRSTMSTP
+AAIASALAAIALLVLVALPFGSMRLGLPDGGSEPEGSDSQVAYELTAEKFGEGYNGPLVV
+TVDLPAGLDEDAAEDARLAVGEQLAGLEHAHAVVPAGFNEDRTVTMFQVLPEEGPNAVST
+EELVRELRATEPAGEASNLGVAGMTSGFIDVSEKLSDALPLYLGVVVGLSLLIMVLVFRS
+ILVPLIATGGFVLSVFAAMGGVVAIYQWGWLGSVFGVHNPGPVLSFLPTIMIGVLFGLAM
+DYQLFIASGMREAYAHGLPARQAVLTGLRSGRAVVIAAAIIMISVFGGFIFAHDAMIRPI
+GFGLAFGVLLDAFVVRLLLMPALMHLLGEKAWWLPRWLDRIMPDVDVEGAQLERGHAPAA
+EAASAPAPEAGRTPAVDGGAHRA
+>1_1822
+MATLLYRLGLGAARRPLLVILAWVLALALAVGGFLAFGGTLSSTVTIPGTPTAQVTDRLK
+EEFPEASRGRGQVVFTTEDGSPLTDAQREQITALLDDVAEQPAVEGVVNPFEAQAQQDDA
+RTRLDEGRTELADGEQRLADGRQEIEDGRAELERRTAEADAAEQRLAEAAAQLEEGQAKL
+DAARADLEERGLDALPAEALAPLREAEQQVAEGQEQLDAGRAELEEQAERLEAGQAKLDA
+QRQELEAAQAELDARWAELEAGQAELDARAEQLAAGRAELEQARDAALAEAEAAGIPAEQ
+VTEQFADQEAQLAAAEAQLAAGQDQADAARAQLEAAQAEADAGAEQLAAAQAEADDGAAR
+LAAGRQQLQESEAELEAGREQVAAGRQQALDAAEAELDAQQQKIDEGRAEYERGVAELED
+GRAQLAAGAERLDQAEADLADGRAELEDGRVEAERGERTLALAEDFRTVSEDGSTAVGIV
+TFTTPTLDVTAEDKEAVTGALTGADIDGVAVHPSQELNATAPSLLGPGEVVGLVVAAIVL
+VVMLGTLVGAGLPLVNALVGVGVGAAGALAFSSAVEMISVTPVLGVMLGLAVGIDYALFI
+VNRHRQELRRGTGLHESIALANGTSGNAVVFAGITVIVALVGLNVTGIPFLGLMGTVGAV
+CVAVAVLVAVTLTPALLSLAGMRILSKKERARLADEGPASVAEGSAAVRRAGRRSTMSTP
+AAIASALAAVALLVLVALPVGSMRLGLPDGGSEPEGSDSQVAYELTAEKFGEGYNGPLVV
+TVDLPAGLDEDAAEDARLAVGEQLAGLEHAHAVVPAGFNEDRTVTMFQVLPEEGPNAVST
+EELVRDLRATEPAGEASNLGVAGMTSGFIDVSEKLSDALPLYLGVVVGLSLLIMVLVFRS
+ILVPLIATGGFVLSMFAAMGGVVAIYQWGWLGSVFGVHNPGPVLSFLPTIMIGVLFGLAM
+DYQLFIASGMREAYAHGLPARQAVLTGLRSGRAVVIAAAIIMISVFGGFIFAHDAMIRPM
+GFGLAFGVLLDAFVVRLLLMPALMHLLGEKAWWLPRWLDRIMPDVDVEGAQLERAHAPAQ
+PSVPAPDGGAHRA
+>2_895
+MATLLHRLGLASARRPWAAILAWLIALALAVGAFLAFSGTLTTAVTIPGTPTAQVTDRLK
+EQFPDAAKGTGQVVFATEDGSAFTEAQRRAVSDALRGVEGQDAVDSVVDPFDVARQQDEA
+RTALEDGRRQIAEGEQKIAENEKALEDGRAQLAEAKDKAEAGQKELDAAAAQLDAGQEKL
+DAARADLEARGLDALPAEATAPLTEAQQKLDAGQAEYDAGVAALEEQRPALEAAEAEIAK
+QEAALEQAQARFEAGRAQAIAQAEAAGATPEQAAAAVDARLAPEREKLDAGAAQLEEARA
+RTEAGRAEFDAGEEKLAAAAAELEQGRAQLAAGREKALTAARAELDAQQQKIDAGRAEHE
+QGVRELEAGRAEIAQNEAKLADGPAQLEQARKDLAAGREKADRGQRMLTLTDGYRVVSED
+GSAALGTVAFDRPSLDVTTEQKTAVIDALADADIPGVRAIPTQALNATMPSLIGPGEVVG
+LAVAALVLVLMLGTLVGAGLPLVNALIGVGVGAAGALAFSGVVEMMSVTPVLGIMLGLAV
+GIDYALFIVNRHRLELKRGTPLHASIALANGTSGNAVVFAGITVVIALVALNVTGIPFLG
+LMGTVGAVCVAVAVLVAVTLTPALLSLAGMRILSRKERARRAAEAAPVADDAAAPSGSHA
+AAPVSRSAARAVRDARRRRRMSTPAAVATVLASAAALIVVAIPFGSMRLGLPDGASEPVG
+SDSQVSYELIADEFGEGYNGPLVVTVDLPSGLDETTAEDAQVQVGEQLKGLEHVAAVVPA
+GFNQDRTTAMFQVLPEEGPNAISTGDLVHTLRDTEPAGEASNLGVAGVTSGFIDVSEKLS
+AALPLYLGVVVGLSLLIMILVFRSILVPLIATGGFVLSVFAAMGGVVAIYQWGWLGGLFN
+VHAPGPVLSFLPTIMIGVLFGLAMDYQLFIASGMREAYAHGQPARDAVMTGLRAGRAVVT
+AAAIIMISVLGGFVFSHDAMIRPIGFGLAFGVLLDAFVVRLLLMPALMHLLGDAAWWLPK
+WLDRILPDVDVEGAGLERHGAAGEAADAAPVGADRA
+>3_1529
+MATLLYRLGLGAARRPLLVILAWVLALALAVGGFLAFGGTLSSTVTIPGTPTAQVTDRLK
+EEFPEASRGRGQVVFTTEDGSPLTDAQREQITALLDDVAEQPAVEGVVNPFEAQAQQDDA
+RTRLDEGRTELADGEQRLADGRQEIEDGRAELERRTAEADAAEQRLAEAAAQLEEGQAKL
+DAARADLEERGLDALPAEALAPLREAEQQVAEGQEQLDAGRAELEEQAERLEAGQAKLDA
+QRQELEAAQAELDARWAELEAGQAELDARAEQLAAGRAELEQARDAALAEAEAAGIPAEQ
+VTEQFADQEAQLAAAEAQLAAGQDQADAARAQLEAAQAEADAGAEQLAAAQAEADDGAAR
+LAAGRQQLQESEAELEAGREQVAAGRQQALDAAEAELDAQQQKIDEGRAEYERGVAELED
+GRAQLAAGAERLDQAEADLADGRAELEDGRVEAERGERTLALAEDFRTVSEDGSTAVGIV
+TFTTPTLDVTAEDKEAVTGALTGADIDGVAVHPSQELNATVSSLLGPGEVVGLVVAAIVL
+VVMLGTLVGAGLPLVNALVGVGVGAAGALAFSSAVEMISVTPVLGVMLGLAVGIDYALFI
+VNRHRHELRRGTSLHESIALATGTSGNAVVFAGITVIVALVGLNVTGIPFLGLMGTVGAV
+CVAVAVLVAVTLTPALLSLAGMRILSKKERARLADEGPASVAEGSAAVRRAGRRSTMSTP
+AAIASALAAVALLVLVALPVGSMRLGLPDGGSEPEGSDSQVAYELTAEKFGEGYNGPLVV
+TVDLPAGLDEDAAEDARLAVGEQLAGLEHAHAVVPAGFNEDRTVTMFQVLPEEGPNAVST
+EELVRELRATEPAGEASNLGVAGMTSGFIDVSEKLSDALPLYLGVVVGLSLLIMVLVFRS
+ILVPLIATGGFVLSMFAAMGGVVAIYQWGWLGSVFGVHNPGPVLSFLPTIMIGVLFGLAM
+DYQLFIASGMREAYAHGLPARQAVLTGLRSGRAVVIAAAIIMISVFGGFIFAHDAMIRPM
+GFGLAFGVLLDAFVVRLLLMPALMHLLGEKAWWLPRWLDRIMPDVDVEGAQLERGHAPAA
+EAASAPAPEAGRTPAVDGGAHRA
+>4_1743
+MATLLYRLGLGAARRPLLVILAWVLALALAVGGFLAFGGTLSSTVTIPGTPTAQVTDRLK
+EEFPEASRGRGQVVFTTEDGSPLTDAQREQITALLDDVAEQPAVEGVVDPFEAQAQRDDA
+RTRLDEGRAELADGEQRLADGRQEIEDGRAELERRTAEADAGEQRLAEAAAQLDEGQAAL
+DAARADLEERGLEALPADALAPLREAEQKVADGQEQLDAGRAELEEQAERLEAGQAEIDA
+QRQELEAGQAELGDRWTELEAGQAELDAQAEQLAAGRAELEQARDAALAEAEAAGIPAEQ
+VAAQFADQEAQLAAGEAQLAAGQDQADAARAQLEAAQAEADAGAEQLAAAQAEADDGAAR
+LAAGRQQLQESEAELEAGREQVAAGRQQALDAAEAELDAQQQKIDEGRAEYERGVAELED
+GRAQLAAGAERLDQAEADLADGRAELDDGRVEAERGERTLALAEDFRTVSEDGSTAVGIV
+TFTTPTLDVTAEDKEAVTGALTGADIDGVAVHPSQELNATAPSLLGPGEVVGLVVAAIVL
+VVMLGTLVGAGLPLVNALVGVGVGAAGALAFSSAVEMISVTPVLGVMLGLAVGIDYALFI
+VNRHRQELRRGTGLHESIALANGTSGNAVVFAGITVIVALVGLNVTGIPFLGLMGTVGAV
+CVAVAVLVAVTLTPALLSLAGMRILSKKERARLADEGPASVAEGSAAVRRAGRRSTMSTP
+AAIASALAAVALLVLVALPVGSMRLGLPDGGSEPEGSDSQVAYELTAEKFGEGYNGPLVV
+TVDLPAGLDEDAAEDARLAVGEQLAGLEHAHAVVPAGFNEDRTVTMFQVLPEEGPNAVST
+EELVRDLRATEPAGEASNLGVAGMTSGFIDVSEKLSDALPLYLGVVVGLSLLIMVLVFRS
+ILVPLIATGGFVLSMFAAMGGVVAIYQWGWLGSVFGVHNPGPVLSFLPTIMIGVLFGLAM
+DYQLFIASGMREAYAHGLPARQAVLTGLRSGRAVVIAAAIIMISVFGGFIFAHDAMIRPM
+GFGLAFGVLLDAFVVRLLLMPALMHLLGEKAWWLPRWLDRIMPDVDVEGAQLERAHAPAQ
+PSVPAPDGGAHRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000647.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000647.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8a98c36448fde118f0a5f9258e4a7879fdcd6a07
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000647.fa
@@ -0,0 +1,35 @@
+>0_967
+MARRDGLGRQARSALDGIVHALKPEGMDPHLPARHLLDYVLDGPDGPRAVVAAGDPATAT
+HLTWLVSGMGIRPHTAMWGTAREAAQLAAAQRAAGAPRPAVLAWLGYAAPTPWRILLDGP
+GRRGGERLADDVAAWWDFARTGAGETEDRAGEPDDDRPSLRARGTALHGAVEAHSYGSLV
+AAHALRLLAERGLQPDDVEVLDDTDGGADADAGAQDTARPAERPVEALVVSGAVGLPAAF
+AARAGRLGLPPGRVFRAQAPGDVLARVGRALGRRRDWTDAVLLPVTPRPGLEGGAVHGHR
+TARWSPAAGTDAPRGYRDPGTVTLAATARVTAGLPLPPEPA
+>1_1813
+MQERLRADMARRDGLGRQARSALDGIVHALKPEGMDPHLPARHLLDYVLEGPDGPRAVVA
+AGDPATATHLTWLVSGMGIRPQTALWGTAREAAHLAAAQRAAGAPRPVVIGWLGYPAPTP
+WRVVLDGPGRRGGAMLAADVRAWWEFLRHGPGEDDDVAPALRARGTAVHGAVEAHSYGSL
+VAAHALRLLADRGLQPDDAEAPWPAERPVEALVVSGTVGLPAALAARSAHLGLRSGRTFR
+ALAPGDLLARVGRAVGRRRDWTDAAVLPVAPRPGLAGAAVRGHRTARWSPTAPEDAPRGY
+RDAGSVTLAATARVTAGLPLSPVPDGADPAGPVAPA
+>2_905
+MDLPEQARAAAARLDADRARARDGRLSARQLAALDGAEHALRRDSMDAAIPERVLVDWDL
+DAPDGPVAAVAVGELERPTHLTWQVSGMGIAASTAAWGSAREAGQLLLAQRAAGAPRPCV
+VAWLGYPAPPWWRTLDDGLARRGGARLAEAVRETRPGPSHGAGTAVHTAIEAHSYGTLVA
+THALEGLAAGDPPLTVDALALSGALGLPRRLAGRLEALGLAAGRVFEARAPGDRLAWLGR
+TLAGRAPWPEAVALPVAADPAAGLAGVRGHNTARWRPEDGDDGAPRGYRDPGSVTLAALA
+RVTAGLPVAGGGPRSGQRRA
+>3_1520
+MQERLRADMARRDGLGRQARSALDGIVHALKPEGMDPHLPARHLLDYVLEGPDGPRAVVA
+AGDPATATHLTWLVSGMGIRPQTAMWGTAREAAHLAAAQRAAGAPRPVVIGWLGYPAPTP
+WRVVLDGPGRRGGAMLAADVWAWWEFLRHGPGEDDDATLALRARGTAVHGAVEAHSYGSL
+VAAHALRLLADRGLQPDDAEAPWPAERPVEALVVSGAVGLPAALATRAAHLGLRSGRTFR
+ALAPGDLLARVGRAVGRRRDWTDAAALPVAPRPGLAGAAVRGHHTARWSPTASEDAPRGY
+RDAGSVTLAATARVTAGLPLSPAPDGADPAGPVAPV
+>4_1734
+MAARSRVRERLRADMARRDGLGRRARSALDGIVHALKPEGMDPHLPARHLLDYVLDGPDG
+PRAVVAAGDPATATHLTWLVSGMGIRPQTAMWGTAREAAHLAAAQRAAGAPRPVVIAWLG
+YPAPTPWRVVLDGPGRRGGAMLAADVRAWWEFMRHGPGEDDAAAPALRARGTAVHGAMEA
+HSYGSLVAAHALRLLADRGLQPDDAEAPWPAERPVEALVVSGAVGLPAALAARAAHLGLR
+SGRVFRALAPGDLLARVGRAVGRRRDWTDAAVLPVAPRPGLAGAGVRGHHTARWSPTAPG
+DAPRGYRDAGSVTLAATARVTAGLPLPPVPDGADPAGPVAPA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000649.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000649.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c09cca7fe6deb2fc68218320f638ae4741679298
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000649.fa
@@ -0,0 +1,47 @@
+>0_969
+MSTPASPSARRARAALGLAAVALVALSACARTEPAPEPAPSTASATALPPMDMAPFTVDV
+PSLDLDRVPGASIAVLEGTDPDHRGAWLQVPEAPAWTEAMAGSVRGQIDAYRRDTDRGAD
+PRLEVQPRLAVVGEDIAAARLLSTETRGTDSVSSSHVVWYSAREDRVLETRDLFTDEGWD
+AFRTEVRQRMKNDPDVVRERLASAVDSPELVENRRIWDAVVLLPDGSVMLEADQASMAPA
+AAGVLTVRIPRDTAAPWLSDLGDAATDAARTPADLRLPDRSTPSPSTSAPEPAESSWTPE
+ATGAPVPPRVPVPDPTTTAPSVDPGGDRDPSTSSAPPSSRPGTTAPSPVAGPQHPGPHHP
+GPHHLRADRPGARPLDDDGAPAPGADQPDAHADADPVDSHADADAHDAHPDPDRDGDHGP
+ADRPGAGARAGADDAAAERHERLRPRDPGRAGLSRPTPGCPGRPRTGACPARRRPAPPPH
+GLT
+>1_1811
+MHPVLPSPRRGRAALGLAAVALVALSACARTEPQPEPAPATTAASALPSMDMAPFTVEVP
+SHDLERVPEASVAVLEGEDPDHHGAWLQVSGAPAWTDAMAGAVRDQIDQYRRDTDPSADP
+RLEIQPQLAVVAEDIAAARLLATERRGTDSVSTSHVIWYSAREDRVLETADLFTPDGWDA
+FRAEVRQRMANDPDVIGSRLDSAVDAPEQVENRRVWDAVVFLPDGSLMLEADQASMAPAA
+AGVLTVRIPRDTATAWLSDLGHVAADAASAPADLRLPDRSTPTPEEQQPEPAPEPEPETS
+SWTEEATGAPVPPPSAPADTAAPTPSVTTPVPSSTAPSSSAPAPTRSATPSSPSSPPTSS
+SPSGTGSGSPTPSTPDPTPTSATPTPTSPTPTSPSPSGPSTSASGPSTSAPATDPAPDPT
+ESAPEPTATTASASASPTSGDRSSSTP
+>2_908
+MHRLSPASTVRLRAGAGLLALGMLGLTACGSGDDAASSSPAPSSAAATQELPSMDMAPFT
+LDVPSLDLDKVPGASLAVIQGQDPEYHAAWLQVPGAPAWTQAMDESVRGLVAQYQRDTDR
+TASPVLDVQPRLAVAGRDVAAARLLSTERRGDRSVSAVHVVWYAAREDRVLSTEDLFTAD
+GWAAFRREVGARMAGDPAVVQDRLRSAVDAPAQVENVRVWDALTFLPDGSALLEVDQAAM
+SPADAGVLTARIPADTVRPWLSALGVSAQDAARSPEALVLPERPSAAPASEGGDAAVPAP
+GQPSSDGATTSAPGQGSVPPAPGLPGAPAPGTPGTASQGGGSPGTAPQDTGSQHTGSQGT
+GSQGTGASAPGASPSATRGDAGPAPTSSSAAPAPTGTGAPAPAPLPMPAPTTSSATPSGP
+APAPTGGTPAPSPTTVAPTEPSPSADPTTSEPAPSSDPAPAPTDTASPAPTASSPSTPAD
+VTGTATASGPLPATGGSTDPVTPTPAA
+>3_1518
+MHPVLPSPRRGRAALGLAAVALVTLSACARTEPQPEPAPATTAASALPSMDMAPFTVEVP
+SHDLERVPEASVAVLEGEDPDHHGAWLQVPGAPAWTEAMAEAVRAQIDQYRRDTDPSADP
+RLEIQPQLAVVAEDIAAARLLATERRGTDSVSTSHVIWYSAREDRVLETADLFTPDGWDA
+FRAEVRQRMANDPDVIGSRLDSAVDAPEQVENRRVWDAVVFLPDGSLMLEADQASMAPAA
+AGVLTVRIPRDTATAWLSDLGHVAADAASAPADLRLPDRSTPTPEEQQPEPAPEPEPETS
+SWTEEATGAPVPPPSAPADTAAPTPSVTTPVPSSTAPSSSAPAPTRSATPSSPSSPPTSS
+SPSGTGSGSPTPSTPDPTPTSATPTPTSPTPTSPSPSGPSTSASGPSTSAPATDPAPDPT
+ESAPEPTATTASASASPTSGDRSSSTP
+>4_1732
+MHPVLPSPRRGRAALGLAAVALVTLSACARTEPQPEPAPATTAASALPSMDMAPFTVEVP
+SHDLERVPEASVAVLEGEDPDHHGAWLQVPGAPAWTEAMAEAVRAQIDQYRRDTDPSADP
+RLEIQPQLAVVAEDIAAARLLATERRGTDSVSTSHVIWYSAREDRVLETADLFTPDGWDA
+FRAEVRQRMANDPDVIGSRLDSAVDAPEQVENRRVWDAVVFLPDGSLMLEADQASMAPAA
+AGVLTVRIPRDTAAPWLSDLGHVAADAASAPADLRLPDRSTPTLEEQQPEPETSSRTQEA
+TDAPVPPPSAPADTAAPTPSATTPVPSSTVPSSTAPSSSVPTSTGSATPSSPTSPASSSS
+PSGTGSGSPTPSTPDPSPTSATPTPTSPSPSGPSTSAPATAPAPDPTESAPEPTATTASA
+PAPPTSGDRSSGTP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000653.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000653.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ec7a9c701958c0b2c1d088276c15647ab7d3225e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000653.fa
@@ -0,0 +1,30 @@
+>0_973
+MFVLAIVVLALLIDWGTIGENVLNFPAVAPLFPNIILVGLGNTLFYTATSFVVGLLGGIA
+LALMRMSAFAPYRWLATAYVEFFRGVPALLVFLAFGYGVPFAFGVSWPIPVVVMTALGMV
+AAAYIAETLRAGLQAFPPGQMEAARSLGMPAWQAMITIVIPQAFRIVLPPLTNEVILLTK
+DSSLVYVLGLAAHEYELTKFGRDGISALDAGMTPILVAGLFYLVITVPLSLLARRFEARS
+TKKGH
+>1_1807
+MSTQAPVSPAPAMKPGRARRRRRLSLIIQAAVFVLALVVLAVLIDWGALAENVLNFPAVA
+PMFPNVILVGLGNTLFYTVTSFVVGLLGGIVLALMRLSSFGPYRWLATAYVEFFRGVPAL
+LVFLAFGYGVPFAFGVSWPIPVVVMVALGMVSAAYIAETLRAGLQAVPRGQMEAARSLGM
+PTWRAMVTIVIPQAFRIVLPPLTNEVILLTKDSSLVYVLGLAAHEYELTKFGRDGISALD
+AGMTPILVAGLFYLVITVPLSLLARRFETRSTKKGH
+>2_912
+MSTQASPAPRTAAAPSRAGRRRTLSVAVQAAVFVLAIVVVALLADWQAIAENVLNFSAAG
+PMFPNVILVGLGNTIFYTVTAFVVGLLGGMLLALMRMSSFAPYRWLATAYVEFFRGIPAL
+LVFLAFGYGVPFAFGVSWPIPVVVMIALGMVSAAYIAETLRAGLQAVPKGQMEAARSLGM
+PHWRAMLTIVIPQAFRVVLPPLTNEVILLTKDSSLVYVLGLAAHEYELTKFGRDGIAALD
+AGMTPILVAGLCYLVITIPLSLLARRFEARSSRKAH
+>3_1514
+MSTQAPVSPAPAMKPGRARRRRRLSLIIQAAVFVLALVVLAVLIDWGALAENVLNFPAVA
+PMFPNVILVGLGNTLFYTVTSFVVGLLGGIVLALMRLSSFGPYRWLATAYVEFFRGVPAL
+LVFLAFGYGVPFAFGVSWPIPVVVMVALGMVSAAYIAETLRAGLQAVPRGQMEAARSLGM
+PTWRAMVTIVIPQAFRIVLPPLTNEVILLTKDSSLVYVLGLAAHEYELTKFGRDGISALD
+AGMTPILVAGLFYLVITVPLSLLARRFEARSTKKGH
+>4_1728
+MSTQAPVSPAPAMKPGRARRRRRLSLIIQAAVFVLALVVLAVLIDWGTLTENVLNFPAVA
+PMFPNVILVGLGNTLFYTVTSFVVGLLGGIVLALMRLSSFGPYRWLATAYVEFFRGVPAL
+LVFLAFGYGVPFAFGVSWPIPVVVMVALGMVSAAYIAETLRAGLQAVPRGQMEAARSLGM
+PTWRAMVTIVIPQAFRIVLPPLTNEVILLTKDSSLVYVLGLAAHEYELTKFGRDGISALD
+AGMTPILVAGLFYLVITVPLSLLARRFETRSTKKGH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000669.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000669.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6570225b8834b99371548408cc527eee58eaa86c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000669.fa
@@ -0,0 +1,40 @@
+>0_996
+MFLALRDLRFATGRFALMGSVVALISLLLVMLSGLTAGLGGQNTAALDRLEEQGVQRLVF
+GGAAGQEATASFTQSKFTAEQRDAWAATDGVASVEPLGVSQGRAVGLAHGVETDEAGRAD
+VADVPTTGVASTAFLGLVPGGADAPAALAPGEVVLSSDVADSLGAQAGDAVAVSGFVFTV
+AEVVPNEFYSHSPVTWLALEDWRAISHTADDAVLGTAGLVRFAAGADPDAVAAAGDAAAG
+TVSETVRGSYAALPSYRSENGSLMTMQGFLYGISALVVIAFLSIWTVQRTRDIAVLKALG
+GTDGWVLKDALTQAAFVLLGGVLVGTALAAGIGVLAARGVPFELSWATTLVPAAGILVLG
+MLAAVAAVFRVTRIDPLVALGGN
+>1_1792
+MFLALRDLRFATGRFALMGSVVALISLLLVMLSGLTAGLGGQNTAAIDRLGEQGVQRLVF
+GGAAGQEPTASFTQSEFTVAQRDAWAATDGVASVEPLGVSQGRAIGLEHPVDTDPQGRAD
+VSGEPTTGVATTAFIGLTPGGSDAPAGVELGQIVLSQDVADSLHAQAGDAVAVSGFVYTV
+ADVVPTEYYSHSPVTWLALEDWNAISHTADDAVLGTAGLVRFDAGADVDAVAAAGDDAAG
+TVAETVKGSYAALPSYRSENGSLMTMQGFLYGISALVVIAFLSIWTVQRTRDIAVLKALG
+GSNGWVLKDSLAQAAFVLVGGVAVGTGLAAVIGAFAGRAVPFELSWATTAVPAAGVLVLG
+MLAAVIAVYRVTRIDPLVALGGN
+>2_939
+MFLALRDLRFATGRFSLMGAVVALITVLLVMLSGLTAGLGHQNTAALDDLGARGTDRIVF
+GGTAGQDPTASFTSSEVTAAQLDSWCAADGVARVEPVGVAQGRLTGVAGHVDTDAAGRPA
+ETPEVAGVGSASFVGLDPAAPQAPAGLEDGELVLSQALAEALEVEEGGQVESSGRVYTVA
+SVAADSWYSHTPVAWTTLTDWRALSHTEDADVAGTAGLVTLVDGADADAVASAADDAAHT
+VATDVKGAYAALPAYSSEHGSLTMMQGFLYGISALVVVAFLSIWTIQRTREIAVLKALGA
+STGWVLRDSLLQGGIVLAVGVGLGTALAAGAGWFAAQAVPFVLSPATTVLPALGVLALGL
+AGSALAVARVTRIDPLIALGGN
+>3_1499
+MFLALRDLRFATGRFALMGSVVALISLLLVMLSGLTAGLGGQNTAAIDRLGEQGVQRLVF
+DGAAGQEPTASFTQSEFTVAQRDAWAATDGVASVEPLGVSQGRAIGLEHPVDTDPPGRAD
+VSGEPTTGVATTAFIGLTPGGSDAPAGVEPGQIVLSQDVADSLHAQEGDAVAVSGFVYTV
+ADVVPTEYYSHSPVTWLALEDWNAISHTADDAVLGTAGLVRFDADTDVDAVAAAGDDAAG
+TVAETVKGSYAALPSYRSENGSLMTMQGFLYGISALVVIAFLSIWTVQRTRDIAVLKALG
+GSNGWVLKDSLAQAAFVLVGGVAVGTGLAAAIGAFAGRAVPFELSWATTAVPAAGVLVLG
+MLAAVVAVFRVTRIDPLVALGGN
+>4_1713
+MFLALRDLRFATGRFALMGSVVALISLLLVMLSGLTAGLGGQNTAAIDRLGEQGVQRLVF
+GGAAGQEPTASFTQSEFSVAQRDAWAATDGVASVEPLGVSQGRAIGLEHPVDTDPQGRAD
+VSGEPTTGVATTTFIGLTPGGSDAPAGVEPGQIVLSQDVADSLHAQEGDAVAVSGFVYTV
+ADVVPTEYYSHSPVTWLALEDWNAISHTADDAVLGTAGLVRFDAGADVDAVAAAGDDAAG
+TVAETVKGSYAALPSYRSENGSLMTMQGFLYGISALVVIAFLSIWTVQRTRDIAVLKALG
+GSNGWVLKDSLAQAAFVLVGGVAVGTGLAAVVGAFAGRAVPFELSWATTAVPAAGVLVLG
+MLAAVVAVYRVTRIDPLVALGGN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000672.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000672.fa
new file mode 100644
index 0000000000000000000000000000000000000000..aa61238d5645b1cdce21f4a4f3c315b2da619b4a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000672.fa
@@ -0,0 +1,15 @@
+>0_999
+MGPRMNSAWLFVGVMFTCALIGFWTLRGLGFARGDLSLPAALGVLAVAAVAAAVITRFVR
+RR
+>1_1789
+MPPLHHGQPGDDRDPRDPRHRPGAGLGPGLRTAWTFVGVMFTCALIVFWTLRGLGVQRGD
+LSLPAALGVLALAAVAAAVITRYVRRR
+>2_942
+MTLPPLHHGRDDDADRPAASGPGGRGLGGPAGPGAGLRRTYTFVGVLFACALIGFLSLRL
+LGVERGSMTLPAALGVLAVAAVAAAVITRVVGRR
+>3_1496
+MPPLHHGQPGDDRDPRDPRHRPGAGLGPGLRTAWTFVGVMFTCALIVFWTLRGLGVQRGD
+LSLPAALGVLALAAVAAAVITRYVRPR
+>4_1710
+MPPLHHGQPGDDGDPRDPRHRPGAGLGPGLRSVWMFVGVMFTCALIVFWTLRGFGVQRGD
+LSLPAALGVLALAAVAAAVITRYVRRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000673.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000673.fa
new file mode 100644
index 0000000000000000000000000000000000000000..37f3aa39321c48df30ddc785cd39f15832fb86d8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000673.fa
@@ -0,0 +1,50 @@
+>0_1000
+MKTLVLGNGGREHALLAALSRDPQVGELHAAPGNAGMAALAALHAVEATDPDAVVALARE
+LAADLVVVGPEAPLAAGVSDALREAGFAVFGPSRAAAQLEASKAFAKEVMAAAGVPTAGS
+RTCATAEEAAAALDEFGAPHVVKDDGLAAGKGVVVTSDRAEALAHAQACFDAGGTVVIED
+FLDGPEVSLFVVCDGTDAVALTPAQDFKRIHDGDAGPNTGGMGAYTPLPWLPEGFAEEVM
+DRVARPVLAEMARRGTPFTGVLFCGLAVTAKGVEVIEFNVRFGDPETQAVLARLTTPLGG
+LLADAAAGRLGADRALEWSDDVAVDVVMASAGYPATSSQGDVITGLTDAEALEGVHVIHA
+GTATSGDDVVTAGGRVLAVVGRGADLAQARERAYAGVERIRFDGAQWRTDIGLKAERGEI
+AVPAAVGQAGQAGEDAR
+>1_1788
+MKTLVLGNGGREHALLTALSRDPQVSALHAAPGNAGMADLATLHAVEATDPAAVVELARE
+LGADLVVVGPEAPLAAGVSDALREAGFAVFGPSQAAAQLEASKAFAKEVMAAAGVPTAGS
+RVCTTAAEAAAALDEFGAPHVVKDDGLAAGKGVVVTSDRAEALAHAEACFAAGGTVVIED
+FLDGPEVSLFVICDGEDAVALTPAQDFKRIHDGDAGPNTGGMGAYTPLPWLPEGFTDEVM
+DRVARPVLAEMARRGTPFTGVLFCGLAVTAKGVEVIEFNVRFGDPETQAVLARLETPLGG
+LLADAAAGRLGADRRLEWSDDVAVDVVMASAGYPASSSTGDVITGLADAAALEGVHVIHA
+GTAASGEDVVTAGGRVLAVVGRGADLAQARERAYAGVERIRFDGAQWRTDIGLKAERGEI
+TVPGTGGAK
+>2_943
+MKILVLGNGGREHALLRALSRDPQVGELHAAPGNAGMADAAVLHPVTATDPEAVVALARD
+LAVDLVVVGPEAPLAAGVSDALREAGFAVFGPSQAAAQLEASKAFAKEVMAAAGVPTAGA
+RVCATEAEVDAALTAFGAPHVVKDDGLAAGKGVVVTSDRAAALDHARACLSAGGTVVVED
+FLDGPEVSLFVLCDGEHAVPLTPAQDFKRIHDGDAGPNTGGMGAYTPLQWLPEGFVDEVM
+ERVARPVLAEMSRRDTPFAGVLFIGLAVTENGPEVIEFNVRFGDPETQSVLARLETPLGQ
+LLADAAAGRLGADRELRWSDDVAVDVVLASAGYPASSHSGDVIAGLEDALALEGVDVLHA
+GTARTEDGDVVTAGGRVLAVVGRGATLEQARERAYAGVAKIRFDGAQHRTDIAIKAERGE
+ITVPERRRGYAGAEALELPGWRHVYSGKVRDLYEPADAEPGTSETLLVVASDRISAYDFV
+LEPPIPGKGAVLTRLSLWWFEQLAGVANHVVSTDVPAEVAGRAMVVKRLDMHPIECIARG
+YLTGSGLAEYREHATVTGIPLPDGLVDGSRLEPPIFTPSAKAEVGEHDENITFEQTVERV
+GAPTAEALRAATLEVYTRAEAIARKAGIILADTKVEFGADPVTGELVLGDEVLTPDSSRF
+WDAEAYEPGRAQASFDKQFVRDWLTSPESGWDRTSGEEPPALPADVVERTRARYVEAYER
+LTGRRFEA
+>3_1495
+MKTLVLGNGGREHALLTALSRDPQVSALHAAPGNAGMADLATLHAVEATDPAAVVELARE
+LGADLVVVGPEAPLAAGVSDALREAGFAVFGPSQAAAQLEASKAFAKEVMAAAGVPTAGS
+RVCTTAAEAAAALDEFGAPHVVKDDGLAAGKGVVVTSDRAEALAHAEACFAAGGTVVIED
+FLDGPEVSLFVICDGEDAVALTPAQDFKRIHDGDAGPNTGGMGAYTPLPWLPEGFTDEVM
+DRVARPVLAEMARRGTPFTGVLFCGLAVTAKGVEVIEFNVRFGDPETQAVLARLETPLGG
+LLADAAAGRLGADRRLEWSDDVAVDVVMASAGYPASSSTGDVITGLADAAALEGVHVIHA
+GTAASGEDVVTAGGRVLAVVGRGADLAQARERAYAGVERIRFDGAQWRTDIGLKAERGEI
+TVPGTGGAK
+>4_1709
+MKTLVLGNGGREHALLTALSRDPQVSALHAAPGNAGMADLATLHAVEATDPAAVVELARE
+LGADLVVVGPEAPLAAGVSDALREAGFAVFGPSQAAAQLEASKAFAKEVMAAAGVPTAGS
+RVCTTAAEAAAALDEFGAPHVVKDDGLAAGKGVVVTSDRAEALAHAEACFAAGGTVVIED
+FLDGPEVSLFVICDGEDAVALTPAQDFKRIHDGDAGPNTGGMGAYTPLPWLPEGFTDEVM
+DRVARPVLAEMARRGTPFTGVLFCGLAVTAKGVEVIEFNVRFGDPETQAVLARLETPLGG
+LLADAAAGRLGADRRLEWSDDVAVDVVMASAGYPASSSTGDVITGLADAAALEGVHVIHA
+GTAASGEDVVTAGGRVLAVVGRGADLAQARERAYAGVERIRFDGAQWRTDIGLKAERGEI
+TVPGTGGAK
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000674.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000674.fa
new file mode 100644
index 0000000000000000000000000000000000000000..30136846a278a8e907f167379b499492aaf7a5df
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000674.fa
@@ -0,0 +1,61 @@
+>0_1004
+MTRTATRPLPLREALQVVAPYLQGVRGRWVLGLLSAMAAGLVALAIPQVVQVLVNTVFAE
+AAPGTAGTADPAAGVWWAAGALALFGLAEALFIWLRRFFILPPAADVENRARISIYRRLQ
+RLPVAFHDAWASGQLLSRAQGDLALLRRWIAFGSVMLVVETVTIVVGLVLLFVMSWQLAL
+LYLVAAVPIMIRSFRFRTDFRAASRLSQDQAGDLATTVEESVHGIRVLKAFGRGPDALDG
+FRGEAETLQGTEVHKASVLAKFISLTVSLPELVLGVALGLGLYLVAVGDLTVGALAAYFA
+TTAVLARPVEGVGQLMGMTLSAKTAIDRHLEVMRVPVAVASPAGTDAAEEEATSRAVASS
+AAEDSPVVTDGLPPSSGRLAFRDVVFRYPDAPEDSRPLLAGVDLELTPGETMALVGVTGS
+GKSTLVQLVPRLLDVTAGVVEVDGTDVRAYPLDELRRRVSIAFEDATLFSDTVRANVLLG
+APAEVTADGLDSPRAQALLDLALDTAQAGFARDLPAGVDTEIGEEGLSLSGGQRQRIALA
+RAIAARPDVLVLDDPLSALDVRTEEAVTGRLREVLAGTTTLIVAHRPSTVALADRVAVLQ
+DGAIHDVGTHAELLARSAAYREIITTGAAEDRSLAGLADAAHDDAALAAATDAARPPAGA
+ARPPAGRTAGREETR
+>1_1784
+MTRATSPDASSLRDALGGIAPYLEGVRARWVLGLASATAAGLVALAIPQVIHLLVDTVFT
+QTVLAGPSSPDSRADVWRAAGLLTVLGLAEAAFIGLRRYFILPPAAGVENRARIALFERL
+QRLPVAFHDAWPSGQLLSRAQGDLSLLRRWIAFGSVMLVVDVVTIAVGLVLLFLLSWQLA
+LLYLAAAVPIMWASFGFRNDFRAASRLSQDQAGDLATSVEESVHGIRVLKAFGRGAHALD
+GFRGRARTLQGTEVHKASVLARFIALIVALPETVLGLGLALGLWLVATGELTVGALAAYF
+ATAAVLAGPVESVGQLMGMTLSARTAIDRHVDVLATPVDIASPTGEAAVVPPATGALAFR
+GVRFRWPDADPGRGERDLLDGVDLELVPGETMALVGATGAGKSTLLQLVPRLLDVTAGSV
+CVDGVDVRRMPLEELRRRVSVAFEDATLFSATIRQNVLLGAPADVLADGLHSPAADALLD
+LALETAQAGFVADLADGVETEIGEEGLSLSGGQRQRIALARAIAARPDVLVLDDPLSALD
+VRTEETVTARLREVLDGTTTLIVAHRPSTVALADRVAVLADGRIEDVGTHPELLARSAVY
+RHIISSRPEEQA
+>2_946
+MTRTTTAAAPLPLRDAVRGIAPYLEGVRTRWVLGLLSALAAGLVALAIPQVIRLLVNTVF
+AAPTTPGAPAAEDATASVWWAVGGLALLGAAEALFIWLRRFFILPPAADVENRARIAVYR
+RLQRLPVAFHDAWPSGQLLSRAQGDLSLLRRWIAFGSVMLVVETVTLVVGVGLLFWLSWP
+LALVYLAAALPIMWRSYGFRNDFRTASRLSQDQAGDLATTVEESVHGIRVLKAFGRGPHA
+LEGFRGEAQTLQGTEVHKAGVLASFIAFTVSLAEVMLGVALALGVWLVATGQMTVGALAA
+YFATTAVLARPVEGIGQLLGMTLSAKTAIDRHLEVMRQPVSIASPPGTDPAEEAATGASV
+GEDPDPAVADAPVDVSALPPSRGGLAFRGARFRHPDTPDDAPDLLAGVDLELVPGETMAL
+VGLTGSGKSTLLQLVPRLRDVTGGVVEVDGVDVRDYPLEELRRRVSIAFEDATLFSDTVR
+ANVLLGAPAAEVADGPDSPAAEALLELALDTAQAGFVADLPQGVDTPIGEEGLSLSGGQR
+QRLALARAIAARPDVLVLDDPLSALDVRTEEAVTARLREVLAGTTTLIVAHRPSTVALAD
+RVAVLQDGRIADVGTHADLLARSGAYRQIITTDREDAR
+>3_1492
+MTRATSPDASSLRDALGGIAPYLEGVRARWVLGLASATAAGLVALAIPQVIHLLVDTVFT
+QTVLAGPSSPDSRADVWRAAGLLTVLGLAEAAFIGLRRYFILPPAAGVENRARIALFERL
+QRLPVAFHDAWPSGQLLSRAQGDLSLLRRWIAFGSVMLVVDVVTIAVGLVLLFLLSWQLA
+LLYLAAAVPIMWASFGFRNDFRAASRLSQDQAGDLATSVEESVHGIRVLKAFGRGAHALD
+GFRGRARTLQGTEVHKASVLARFIALIVALPETVLGLGLALGLWLVATGELTVGALAAYF
+ATAAVLAGPVESVGQLMGMTLSARTAIDRHVDVLATPVDIASPTGEAAVVPPATGALAFR
+GVRFRWPDADPGRGERDLLDGVDLELVPGETMALVGATGAGKSTLLQLVPRLLDVTAGSV
+CVDGVDVRRMPLEELRRRVSVAFEDATLFSATIRQNVLLGAPADVLADGLHSPAADALLD
+LALETAQAGFVADLADGVETEIGEEGLSLSGGQRQRIALARAIAARPDVLVLDDPLSALD
+VRTEETVTARLREVLDGTTTLIVAHRPSTVALADRVAVLADGRIEDVGTHPELLARSAVY
+RHIISSRPEEQA
+>4_1706
+MTRATSPAASSLRDALGGIAPYLEGVRARWVLGLASATAAGLVALAIPQVIHLLVDTVFT
+QTVLAGPSSPDSRADVWRAAGLLTVLGLAEAAFIGLRRYFILPPAAGVENRARIALFERL
+QRLPVAFHDAWPSGQLLSRAQGDLSLLRRWIAFGSVMLVVDVVTIAVGLVLLFLLSWQLA
+LLYLAAAVPIMWASFGFRNDFRAASRLSQDQAGDLATSVEESVHGIRVLKAFGRGAHALD
+GFRGRARTLQGTEVHKASVLARFIALIVALPETVLGLGLALGLWLVATGELTVGALAAYF
+ATAAVLAGPVESVGQLMGMTLSARTAIDRHVDVLATPVDIASPTGEAAVVPPATGALAFR
+GVRFRWPDADPGRGERDLLDGVDLELVPGETMALVGATGAGKSTLLQLVPRLLDVTAGSV
+CVDGVDVRRMPLEELRRRVSVAFEDATLFSATIRQNVLLGAPADVLADGLHSPAADALLD
+LALETAQAGFVADLADGVETEIGEEGLSLSGGQRQRIALARAIAARPDVLVLDDPLSALD
+VRTEEAVTARLREVLDGTTTLIVAHRPSTVALADRVAVLADGRIEDVGTHPELLARSAVY
+RHIISSRPEEQA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000676.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000676.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9901df4ca5f07af2e567c019e75403945057fc90
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000676.fa
@@ -0,0 +1,70 @@
+>0_1006
+MASRTSRRLPEPSSALGRLLAFLGLSALAGLLVAALLLPLAGLTGVAAASGREMLDELPD
+ELPAEPVSVPSRMISEDGEEIAVFYEEDRIPVPLDQISEHMRNAIVAVEDERFYEHDGVD
+ARGLIRATVNNATSDSTQGASTLTQQFVNNMLVNVQQIRGDSRLTLSGTKNVSDKVKEIK
+LAVAVEEQMTKDEILEGYLNIVLFSGRAYGVEAASRYVFGKSAAELESWEAATLAGMVQS
+PTRFNPARNPEEATERRNLVLGAMKKNGYLTEEEHAEAVAQPMEVVMESRPSGCLYSKFG
+SYFCDYVERQILADPAFGPDPQSRQALLDRGGLTIRTTIDSELQKAAEENLRKSVPNNES
+LGAGHALTSVQAGTGNIVTMAQNTEYAIQDELGHTSLNFNVDREWGGGQGFQAGSTLKPF
+VALTWLRNGNRMVDSVDASRNVYPTGTRFEASCRPGGYTTIGGTWQFKNVIPGMLRQVRV
+DEGLFWSVNTPTVATAYQMDLCDITSLTTQLGITRALDSSPLQPDDPSFLLGKDSIAPLS
+LAGAYAAIAADGLYCEPRAILEVTDTVGNQYDVAGPQCDQVVDPKHIAELMPVLRHIGAF
+NIAEEGAGYEFGGKTGTNDNVSSTWFTGFTTELATAVWTGRYNNMKSMTGETVNGEVRNP
+FYSTSINGPSWLEYNQLAKEKYPPGELPDWDGPQSEDPGAEGEHPDGTAFRIDDLDRGGP
+QPQAVPGN
+>1_1782
+MASRTTRFPAPSSALGRLLAFVGLSAVAGLLVAALLLPVAGLAGVAAASGREMLDELPDE
+LPTEPVSVPSRILSEDGEEIAVFYEENRTPVPLDEISEHMQHAIVAIEDERFYDHDGVDA
+RGLIRATVNNATSDSTQGASTLTQQFVNNMLVNVQQIRGDSRLTLSGSKNIADKVKEIKL
+AVAVEKQMSKDEILEGYLNIVLFSGRAYGVEAASQYVFGKSAADLESWEAATLAGMVQSP
+TRFNPARNPEEATERRNLVLNAMKDNGYLSQEEYDHAVAQPMEVVMESRPSGCLYAKFGT
+YFCDYVERQILADPTFGPDVQSRQALLDRGGLTIRTTIDSTLQKETEKNLRASVPNNESL
+GAGHALTSVEAGTGNIRTMAQNTEYAIQDELGHTSLNFNVDKQWGGGQGFQAGSTLKPFV
+ALTWLRNGNRLVDSVDASRNVYPTGTRFAASCRPGGYTTIGGTWQFKNVIPGMLRQVRVD
+EGLFWSVNTPTVATAYQLDLCDITSLTTQLGITRALDSSPLQPDDPSFLLGKDSVAPLSL
+AGAYAAIAANGLYCEPRAILEVTDTVGNQYDVADPQCDQVIDPDHVRELMPVLRHIAGFN
+IAEEGAGYEFGGKTGTNDNVSSTWFVGFTSELATAVWTGRYNNLKSMTGETVNGEVRNPF
+YSTSINGPSWLEYNQLAKEKFPPGELPEWDGPQSEDPGEAGEHPDGRQFHIDDLDRGGPL
+PEAVPGF
+>2_948
+MASRSSRLPARSSALGRLLSFLGLSALAGLLVAGLMMPAAGATGIVFASGRDMLDELPDQ
+LPAEPVSMPSKIYSADGELIATFFQENRQPVPLDQISPYMRNAIVAIEDERFYQHDGVDA
+KGLVRAMVNNVSSSSTQGASTLTQQFVNNMLINSQQVRGDSRLTLSGTKQASDKVKEIKL
+AVAVEKQMSKDQILEGYLNLVLFQGRAYGIEAASQYVFGKPAKDLELWEAATLAGMVQSP
+TRFNPARNPEGTTARRNTVLKAMLKNGYISQEEHDHAVAQPLTYTMKGQSTGCLSAAFGA
+YFCDYVERQILADPTFGPDTASRQALLDRGGLTIRTTIDSNLQKKAEELTRRVIPNNESL
+GAGHSLISLRPGSGDIVTMAQNTEYSIQDELGKTTLNLNVDAKWGGGTGFAAGSTFKPFI
+GLTWLRNGGKLIDSVDGSKDRYPPDARFQASCLPGGYTTAGGGTQGWQLNNVIDGMKKRD
+RIDEGIFWSVNTPTVALAYQMDLCDIVNTLTQVGIVTARDGAPLSPAEPSFVLGKDDVSP
+MTMAGAYATLAANGKYCKPRAITEVTDTTGNQYTVPAPECRQVLDPAQVAEVTPLLRHIA
+AHNIAPDGTGYEFAGKTGTNNNMSSTWFIGYTTELATAVWAGRYTSQKTMRGETINGVVQ
+KEFYGATVNGGTWLEWNDMAKRTFVPGELPEFDGPQSEDPALEGDHPDGRFYRPEDIDRN
+GGTPTSSLGPAAGETAFSSAENAAKFESGVLTR
+>3_1490
+MASRTTRFPAPSSAPGRLLAFVGLSALAGLLVAALLLPVAGLAGVAAASGREMLDELPDE
+LPAEPVSVPSRILSEDGEEIAVFYEENRTPVPLDKISKHMQHAIVAIEDERFYDHDGVDA
+RGLIRATVNNATSDSTQGASTLTQQFVNNMLVNVQQIRGDSRLTLSGSKNIADKVKEIKL
+AVAVEKQMSKDEILEGYLNIVLFSGRAYGVEAASQYVFGKSAADLESWEAATLAGMVQSP
+TRFNPARNPEEATERRNLVLNAMKDNGYLSQEEYDHAVAQPMEVVMESRPSGCLYAKFGT
+YFCDYVERQILADPTFGPDVQSRQALLDRGGLTIRTTIDSTLQKETEKNLRASVPNNESL
+GAGHALTSVEAGTGNIRTMAQNTEYAIQDELGHTSLNFNVDKQWGGGQGFQAGSTLKPFV
+ALTWLRNGNRLVDSVDASRNVYPTGTRFAASCRPGGYTTIGGTWQFKNVIPGMLRQVRVD
+EGLFWSVNTPTVATAYQLDLCDITSLTTQLGITRALDSSPLQPDDPSFLLGKDSVAPLSL
+AGAYAAIAANGLYCEPRAILEVTDTVGNQYDVADPQCDQVIDPDHVRELMPVLRHIAGFN
+IAEEGAGYEFGGKTGTNDNVSSTWFVGFTSKLATAVWTGRYNNLKSMTGETVNGEVRNPF
+YSTSINGPSWLEYNQLAKEKFPPGELPEWDGPQSEDPGEAGEHPDGRQFHIDDLDRGGPL
+PEAVPGF
+>4_1704
+MASRTTRFPAPSSALGRLLAFVGLSAVAGLLVAALLLPVAGLAGVAAASGREMLDELPDE
+LPTEPVSVPSRILSEDGEEIAVFYEENRTPVPLDEISEHMQHAIVAIEDERFYDHDGVDA
+RGLIRAAVNNATSDSTQGASTLTQQFVNNMLVNVQQIRGDSRLTLSGSKNIADKVKEIKL
+AVAVEEQMSKDEILEGYLNIVLFSGRAYGVEAASQYVFGKSAADLESWEAATLAGMVQSP
+TRFNPARNPEEATERRNLVLNAMKDNGYLSQEEYDHAVAQPMEVVMESRPSGCLYAKFGA
+YFCDYVERQILADPTFGPDVQSRQALLDRGGLTIRTTIDSTLQKETEKNLRASVPNNESL
+GAGHALTSVEAGTGNIRTMAQNTEYAIQDELGHTSLNFNVDKQWGGGQGFQAGSTLKPFV
+ALTWLRNGNRLVDSVDASRNVYPTGTRFAASCRPGGYTTIGGTWQFKNVIPNMLRQVRVD
+EGLFWSVNTPTVATAYQLDLCDITSLTTQLGITRALDSSPLQPDDPSFLLGKDSVAPLSL
+AGAYAAIAANGLYCEPRAILEVTDTAGNQYDVADPQCDQVIDPDHVRELMPVLRHIGGFN
+IAEEGAGYEFGGKTGTNDNVSSTWFVGFTSKLATAVWTGRYNNLKSMTGETVNGEVRNPF
+YSTSINGPSWLEYNQLAKEKFPPGELPEWDGPQSEDPGEAGEHPDGRQFTIDDLDRGGPQ
+PQAVPGF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000682.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000682.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cfbe6f8dc687191aafbb9a85d50d57f8f23b73ee
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000682.fa
@@ -0,0 +1,14 @@
+>0_1013
+MSTAAIVMMSLAILLVWGGLALSAVHLLRHPDDSSGDLALGDRLAPAAWEREDELGREDV
+RLGARRG
+>1_1775
+MSTAAIVMMSLAILLVWGGLAVSAIHLLRHPDDSSGDLAIEDDLAPAVWEREDGLLDAQH
+R
+>2_955
+MHTPALIMMVIAMLTVWGGLVLSAVHLLKHPDETSGTLADAVDVDHTL
+>3_1483
+MSTAAIVMMSLAILLVWGGLAVSAIHLLRHPDDSSGDLAIEDELAPAVWEREDGRLDAQH
+R
+>4_1697
+MSTAAIVMMSLAILLVWGGLAVSAIHLLRHPDDSSGDLAIEDELAPAVREREDGRLDARH
+R
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000683.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000683.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2f0e48759f6448690c49dd190a24692646284c1b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000683.fa
@@ -0,0 +1,20 @@
+>0_1014
+MTATPSGAAPSPASAEGGAARVVSASLPVVAVDAALSAPPYRQITDAVLAGVASGCLARG
+DRLPPVRALASELGVAPGTVARAYKELEARGTILTRGRAGTFVAASADARADAAHQAVRR
+CLDTLLDRLGYTADEAVELVRRDAAARA
+>1_1774
+MAFSTRSTGETMRATGPSAAAPSAAPVAGGAAGVVSTSLPVVAVDGSLPTPPYRQIVDAV
+LAGVTSGSLARGDRLPPVRALAAELGVAPGTVARAYKELEAHGTIRTRGRAGTFVAASAD
+ARADAAHQAVRRCLDTLLERLGYTPDEAVELVRRDAAARA
+>2_1032
+MNGVEPTLELDLRSPVPPFEQIRAGISAFVDAGVLAPGDRLPSVRALAADLGVAPNTVVR
+AYRELESAGVVRTARGKGTVVADRPRGALTADDDGTARTLEAAVHSALAAGWDRERVQRV
+VEAALVSPPAPVDRKDTP
+>3_1482
+MAVSTRSTGETMRAPGPSAAAPSAAPVAGGAAGVVSASLPVVAVDGSLSAPPYRQIVDAV
+LAGVASGSLARGDRLPPVRALAAELGVAPGTVARAYKELEAHGTIRTRGRAGTFVAASAD
+ARADAAHQAVRRCLDTLLERLGYTPDEAVELVRRDAAARA
+>4_1696
+MAVSTRGTGESMRLPGPFAAAPVADGAAGVVSASLPVVAVDASLPAPPYRQIVDAVLAGV
+ASGSLARGDRLPPVRVLAAELGVAPGTVARAYKELEAHGTIRTRGRAGTFVAASADARAD
+AAHQAVRRCLDTLLERLGYTPDEAVELVRRDAAARA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000691.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000691.fa
new file mode 100644
index 0000000000000000000000000000000000000000..abe41846083d11121d66ba2abb8325cc62678966
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000691.fa
@@ -0,0 +1,20 @@
+>0_1024
+MTGRAPGGVPRGAASETGSGTVSVLGTAALGAGLLLAVAALGQASVAGAQAAGAADLAAL
+AASDARRGLSAGEPCLVAGQTAARNRAVVVECEVRENGTVRVSVERGRAPLPPALAAAVA
+GPPRLQAPQAVPEDPLPDASSPSTPTPSSVPPSVSPDPSATTGTR
+>1_1765
+MTRGRAPARGERGSGTVSVLGTAALGAGLLLAVAALGQASATGSRAAGAADLAALAASDA
+RRGLSDHEPCVLAGRTAERNGAAVVACEVREDGTVRVAVELARAPLPAATADAVAGPPRS
+QAPGAASVAPPEDPPEAPPPEPSVEASAGTR
+>2_964
+MSGTATALGTALLGAGLLTGVLAVGHASATAARASGAADLAALAASDARRGLGAVPDAGV
+LEPCPLAEESARRNGAEVTECVLLPDGSVRVAVVIAADPLPASTAVAVAGPPVGPRGPVA
+GPGRDDAPEDAPDTPGAPPEAATP
+>3_1473
+MTRGRAPVRGERGSGTVSVLGTAALGAGLLLAVAALGQASVTGARAAGAADLAALAASDA
+RRGLSDHEPCVLAGRTAERNGAAVVACEAREDGTVRVAVELARAPLPAATADAVAGPPRS
+QAPGAGSADPPEAPPPEPSVEASAGTR
+>4_1687
+MTRGRAPARGERGSGTVSVLGTAALGAGLLLAVAALGQASVTGSRAAGAADLAALAASDA
+RRGLSDHEPCVLAGRTAERNGAAVVACEVREDGTVRVAVELARAPLPAATADAVAGPPRS
+QAPGAASVAPPEAPPEPSLEASAGTR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000692.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000692.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d1696006421b426223457abc0c4eea92a6397034
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000692.fa
@@ -0,0 +1,79 @@
+>0_1025
+MSTPPPEPAAAGVAFDPWADPAAGWGAPDDGPSDRRDAPADVDETDHPGDEAHPWDEPAP
+LADAVADVVAGLSVSRPGDPVAGGEAADVLRGALGRHGLPEQIRHVVTLPAREARHADWP
+SEAPEALVGAFAGRGIERPWAHQVRAATVAGAGTHTVVATGTASGKSLAYQLAAGIRLSG
+DPHATVLHLSPTKALAADQLLAWRALERDGATWLRAAPYDGDTAPPDRIWAREHANVLMT
+NPDMLHVGILPHHERWARFFRHLAFVVVDESHSYRGVFGSQVGILLRRLRRVAAHWRGDR
+PEPVFIGASATSADPAGHFSRLIGAPATAVAEDASPHGAVTVAFWEPELTDRRGENGAPV
+RRSAMAASADLLTDLALQQVRTLAFIRSRRGAEAIASAARRQLEELEAGLGSRIAAYRSG
+YLPEERRALEADLRSGRLLGMASTPALEMGIDVAGLDAVVVAGWPGTRASFFQQIGRAGR
+GGQDALAFFVASDDPLDTYVVDHPEAVFDLGVEDTVVDPENPHLLGPQLCAAAAELPLTP
+EAFERFGDPERVRALLDVLVEQGLLRRRPAGWFWTHPEHAAGMVSLRDDGGGPMDIIDAE
+SGTLLGTMDSPQTHYQAHPGAVYVHQDRTYLVEELDEDAHAVIVTRAWPDFTTQARDVTE
+IEIVDVHRRLDAREGTLRWCLGDVQVRTQVVSFQRKALVSGEVLGEEPLELPARDLFTSA
+VWFQASSEELIAAGLTMDRLPGALHAAEHAMIGMMPLVASNDRWDIGGVSMVLHPDTGSP
+AVFVYDGRPGGAGFAERGFAQARRWVEATAGAIAACECEAGCPSCVQSPKCGNRNSPLDK
+AGALTVLRFLLGQADHLVPVVAEGSGETDGGTDDGVGVDGEDASGSGSSGTA
+>1_1764
+MTGHLPEHDPWADPAGGWGPPGTADAAPPVDDAAPDSSGPEPQPVGEVVADVVAGLSVTA
+PGDLCPDTPAGAGLRAALGRTGLPEQIRHVTELPARQARHTDWPADAPEGLVRAFAARGV
+ERPWLHQVRAAALAGAGTHTVLATGTASGKSLGYQLAVGTRLAADPRATALYLAPTKALA
+ADQLTSWRALERDGAPGLRSAPYDGDTAPQDRIWAREHASVLMTNPDMLHVGILPHHERW
+ATFFRNLAFVVVDESHTYRGVFGSQVGILLRRLRRIAAHYRGDRPETVFIGASATSADPA
+GHFARLIGAPAAAVTEDASPHGAVTVAFWEPELTDRRGENGAPVRRSAMAAAADLVTDLA
+LQQVRTLAFIRSRRGAEAIASAAKRQLEEVEPGLGTRIAAYRSGYLPEERRELEADLRSG
+RLLGMASTPALEMGIDVAGLDAVVVAGWPGTRASFFQQIGRAGRGGQDALAFFVASDDPL
+DTFVVDHPEAVFDLGVEDTVVDPENPHLLGPQLCAAAAELPITPEAFGWFGEPERVRALL
+DVLVDQGLLRRRPAGWFWTHPEHAAGMVSLRDDGGGPMDIIDAESGALLGTMDSPQTHYQ
+AHPGAVYVHQDRTYLVEELDEDAHAVVVTRAWPDFTTQARDVTEVEIVAVHRRLDAREGT
+LRWCLGDVQVRTQVVSFQRKALASGEVLGEEPLDLPARDLFTSAVWFQAASDELIAAGLT
+TDRLPGALHAAEHAMIGMMPLVASNDRWDIGGVSMVLHPDTGSPAVFVYDGRPGGAGFAE
+RGFEQARRWVEATAGAIAACECAEGCPSCVQSPKCGNRNSPLDKAGALTVLRFLMDHADH
+LVPADASTDGSGGGASGGSSGGATDAAPGA
+>2_965
+MTGGPVPWPDDDPWAARGPAEDRSARDVPTPAPGGPGWEPPQELATGDPEARAAFAAALG
+RRSLPAQIRHVTTIPARTPRSAPWPAGTPAGLVRAFAARGVQAPWEHQARGTAAALAGRH
+TVLATGTASGKSLAYQLAVGATLAADPRATVLYLAPTKALAADQLASWRALERDGAAWLR
+AAPYDGDTAPQDRIWAREHANVLLTNPDMLHVGILPHHERWAVFFRNLAYVVLDESHTYR
+GVFGSQVGILLRRLRRVVAHYRGERPETVFIGASATSAAPAEHLATLIGAAPGEVEAVTE
+DASPHGAVHVAFWEPELTDRRGENGAPVRRSATATAADLLTDLALQQVRTLAFIKSRRGA
+ETIAGAAKRQLEEVEAGLGSRIAAYRSGYLPEERRALEEALRSGRLLGMASTPALEMGID
+VAGLDAVVVAGWPGTRASFFQQIGRAGRGGQDALAFFVASDDPLDTFVVEHPGAVFDLGV
+EDTVLDPANPHLLGPQLCAAAAELPLRPEDLPWFGGPERVRELLDVLVEQGLLRRRPAGW
+FWTHTEHAASLVSLRDDGGGPMDIIDVESGALLGTMDSPQTHYQAHPGAVYVHQDRTFLV
+EDLDEDAHAVLVQRAWPDFTTQARDVTEIEIVAVHRRLDAAGSSLRWCLGDVQVTTQVIS
+FQRKALLSGEVLGEEPLDLPARDLFTSAVWFQAASEELVAAGLTMDRLPGALHAAEHAMI
+GMMPLVASNDRWDIGGVSMVLHPDTGVPTVFVYDGRPGGAGFAERGFAQARRWVEATAGA
+IAACECAEGCPSCVQSPKCGNRNSPLDKAGALTVLRFLAERFDGLIEVPAHLPDVTA
+>3_1472
+MTGHLPEHDPWADPAGGWGPPGTADSAPPVDDAAPDFSGPEPQPVGAVLADVVAGLSVTA
+PGDLRPDTPAGAGLRAALGRTGLPEQIRHVTELPARQARHTDWPADAPEGLVRAFAARGV
+ERPWLHQVRAAALAGAGTHTVLATGTASGKSLGYQLAVGTRLAADPRATALYLAPTKALA
+ADQLTSWRALERDGAPGLRAAPYDGDTAPQDRIWAREHATVLMTNPDMLHVGILPHHERW
+AAFFRNLTFVVVDESHTYRGVFGSQVGILLRRLRRIAAHYRGDRPETVFIGASATSADPA
+GHFARLIGAPATAVTEDASPHGAVTVAFWEPELTDRRGENGAPVRRSAMAAAADLVTDLA
+LQQVRTLAFIRSRRGAEAIASAAKRQLEEVEPGLGTRIAAYRSGYLPEERRELEADLRSG
+RLLGMASTPALEMGIDVAGLDAVVVAGWPGTRASFFQQIGRAGRGGQDALAFFVASDDPL
+DTFVVDHPEAVFDLGVEDTVVDPENPHLLGPQLCAAAAELPITPEAFGWFGEPERVRALL
+DVLVEQGLLRRRPAGWFWTHPEHAAGMVSLRDDGGGPMDIIDAESGALLGTMDSPQTHYQ
+AHPGAVYVHQDRTYLVEELDEDAHAVVVTRAWPDFTTQARDVTEIEIVAVHRRLDAREGT
+LRWCLGDVQVRTQVVSFQRKALVSGEVLGEEPLDLPARDLFTSAVWFQAASDELIAAGLT
+TDRLPGALHAAEHAMIGMMPLVASNDRWDIGGVSMVLHPDTGSPAVFVYDGRPGGAGFAE
+RGFEQARRWVEATAGAIAACECTEGCPSCVQSPKCGNRNSPLDKAGALTVLRFLMDHADH
+LVPADASTDGSGGGASGGSADPAPGA
+>4_1686
+MTGHLPEHDPWADPAGGWGPPGTADAAPPVDDAAPDSSGPEPQPVGEVVADVVAGLSVTA
+PGDLRPDTPAGAGLRAALGRTGLPEQIRHVTELPARQARHTDWPADAPEGLVRAFAARGV
+ERPWLHQVRAAALAGAGTHTVLATGTASGKSLGYQLAVGTRLAADPRATALYLAPTKALA
+ADQLTSWRALERDGAPGLRSAPYDGDTAPQDRVWAREHASVLMTNPDMLHVGILPHHERW
+AAFFRNLAFVVVDESHTYRGVFGSQVGILLRRLRRIAAHYRGDRPETVFIGASATSADPA
+GHFARLIGAPARAVTEDASPHGAVTVAFWEPELTDRRGENGAPVRRSAMAAAADLVTDLA
+LQQVRTLAFIRSRRGAEAIASAAKRQLEEVEPGLGTRIAAYRSGYLPEERRELEADLRSG
+RLLGMASTPALEMGIDVAGLDAVVVAGWPGTRASFFQQIGRAGRGGQDALAFFVASDDPL
+DTFVVDHPEAVFDLGVEDTVVDPENPHLLGPQLCAAAAELPITPEAFGWFGEPERVRALL
+DVLVEQGLLRRRPAGWFWTHPEHAAGMVSLRDDGGGPMDIIDAESGALLGTMDSPQTHYQ
+AHPGAVYVHQDRTYLVEELDEDAHAVVVTRAWPDFTTQARDVTEIEIVAVHRRLDARAGT
+LRWCLGDVQVRTQVVSFQRKALVSGEVLGEEPLDLPARDLFTSAVWFQAASDELIAAGLT
+TDRLPGALHAAEHAMIGMMPLVASNDRWDIGGVSMVLHPDTGSPAVFVYDGRPGGAGFAE
+RGFEQARRWVEATAGAIAACECAEGCPSCVQSPKCGNRNSPLDKAGALTVLRFLMDHADH
+LVPADASSDGSGGASGGATDAAPGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000694.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000694.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8a27f74d43d53e2982d8a340b1d94612c51e1afc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000694.fa
@@ -0,0 +1,35 @@
+>0_1027
+MSPAPVSRIALYYRFAPLADPEAVRLWQRTLAASLGLTGRIIVSPQGINGTVGGPVDAVK
+QYVKGTREHPALKDLEVKWSDGSAADFPRLSVKVRPELVAFGVPERITVDEHGVVGTGER
+LTPERLEALVAERAGTENPVRFLDGRNTVEAQIGRFDGAVVPAAHTTRDLLAAVDSGSLD
+HLRDAPLVTYCTGGVRCEVLSALLKDRGFREVYQLDGGIVRYGEAFGDAGLWRGELAVFD
+RRIALRFSEDAETIGRCVTCEAPTSALRNCSDPACTTLEVRCAACAAADPDRRCPVCTER
+SAA
+>1_1762
+MSTAALSRIALYYRFTPLADPEAVRLWQRTLAASLGLTGRIIVSPQGINGTVGGPVDAVK
+RYVRGTREHPAFRDLEVKWSDGSAADFPRLSVKLKPELVAFGAPERVTVDADGVVGTGER
+LTPAQVDALVAERAGSANPVRFLDGRNTVEAAIGRFDGAVVPDAHTTRDLLAAVDSGALD
+HLKDAPLITYCTGGVRCEVLSALLKDRGFAEVYQLDGGIVRYGEARGDAGLWRGELAVFD
+RRLSTRFTADAETIGRCVTCEAPTSALRNCADPACTTLEVRCAACAVDDPERRCPVCVHH
+PHPAERTEA
+>2_967
+MTAAAPAAPTPLPAPGGPGRIALYYRFTPLADPEAVRLWQRTLAVSLGLAGRIIVSPQGI
+NGTVGGPAEAVKRYVRGTREHPAFRGLEVTWSDGSAADFPRLSVKVRPELVAFGAPERIR
+VDEHGVVGTGEHLPADQLHALVAERAAQGRPVRFLDGRNSVEAAIGRFEDAVIPAAHTTR
+DLLEAVDSGSLDHLKDQPVVTYCTGGVRCEVLSALLKDRGFSEVYQLDGGIVRYGEAHGD
+AGLWHGRLAVFDRRLSLAFTDGAETLGRCVTCGGATSHLANCADPACTTLQVRCPDCVAA
+HPDHVCPRCLERTPA
+>3_1470
+MSTAPLSRIALYYRFTPLADPEAVRLWQRTLAASLGLTGRIIVSPQGINGTVGGPVDAVK
+RYMRGTREHPAFRDLEVKWSDGSAADFPRLSVKVKPELVAFGAPERVTVDADGIVGTGER
+LTPVQVDALVAERAGTANPVRFLDGRNTVEAAIGRFDGAVVPDAHTTRDLLAAVDSGALD
+HLKDAPLITYCTGGVRCEVLSALLKDRGFAEVYQLDGGIVRYGEARGDAGLWRGELAVFD
+RRLSTRFTADAETIGRCVTCHAPTSALRNCADPACTTLEVRCAACAVDDLEHRCPFCAHR
+PHPAERTEA
+>4_1684
+MSTAALSRIALYYRFTPLADPEAVRLWQRTLAASLGLTGRIIVSPQGINGTVGGPVDAVK
+RYVRGTREHPAFRDLEVKWSDGSAADFPRLSVKLKPELVAFGAPERVTVDADGVVGTGER
+LTPAQVDALVAERAGSANPVRFLDGRNTVEAAIGRFDGAVVPDAHTTRDLLAAVDSGALD
+HLKDAPLITYCTGGVRCEVLSALLKDRGFAEVYQLDGGIVRYGEARGDAGLWRGELAVFD
+RRLSTRFTADAETIGRCVTCEAPTSALRNCADPACTTLEVRCAACAVDDPERRCPVCVHH
+PHPAERTEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000695.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000695.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8024c496485615e8e97fb37cab1996ba54e47343
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000695.fa
@@ -0,0 +1,55 @@
+>0_1028
+MKPPAPSPSSPSLPAPRLTPATAAALDADLAALPYTTAAVEELLGPVATAALDREHAEPA
+RRVVARVLTAAPGDHTQALYDDGALGSGARPLEAGIGSPAARRALAALVSVWMLGDAADA
+ADVAAALPALGLDGAREAGLVAEEGGGTVRGTVDLSPYEADEPGRMWVASDQTALQRRGP
+LPEDHVLGIGRASLTLAGATQRRPVACALDVGVGCGIQTLHLLAHAEHVTATDLSERALE
+FTRFNLLLNADVLGLDRERLEDRVRLAAGDMLAPVAGERFDLVVSNPPFVITPRTDPDAP
+VLTYRDGGREGDRIVAELVAALPAHLTEGGTAQLLANWEIPAGAAAIPAAAAASADGDLA
+DTAGPAPWDARPRSWIAPGMQGWIIQRDAQDPAGYAETWLQDSSLELDPHRYEAAYRGYL
+EDFAARGVAGVGFGHVWLRRPVDDGAQGRAWTVAEELTQPVDEALGAAWAAAVARRDRLA
+AGAPDGAGDPALAALRGLHLRVAEDVSEERHGRFGAEHPEVILARQGAGFRRTARLDTAT
+AGVLSASDGELSVGQLVGAVAALLELDDAGRAGLLAAIRELYEDGFLVERAED
+>1_1761
+MSPVPTPPSPPAPRLTPATAVALAADLAALPFTTAAVEGLLGPVATLALDREHAEAARRV
+VAGHLAGPGRHDDAAGPGDRPGTRGLAAAVGAWLLGDPVPAADLDAALPSLGLAGAVAAG
+LVVEGPDGRVRGAVDLSPYEADEPGRMWIASDLTALQRRGPLPPEHVLGVGRASLTLAGA
+TQRRPVARALDVGVGCGIQTLHLLAHADHVTATDLSERALAFTRFNLLLNADVLGLDRER
+LEDRVRLAAGDLLAPVAGERFDLVVSNPPFVITPRTDPDAPVLTYRDGGREGDRIVAELI
+AALPDVLAEGGTAQLLANWEIPAGDTADADTAPWDARPRSWVASGMQAWFIQRDRQDPAG
+YAETWLQDSSLELDPPAYEAAYRGYLDDFAARGVAGVGFGHVWLRRPAADGSQGRGWVVA
+EELTQAVDEALGTAWAAAVARRDRLTAGAGAGDAVGDPALAALRGLHLRVAADVTEERHQ
+RFGAEHPEVILARQGSGFRRVARLDTATAGVLSASDGELSVGQLVGAVAALLELDDVGRA
+GLLAALRELYEDGFLVEG
+>2_968
+MSLPAPHLSPAAAAALAADLTALPYTTDVVETLLGPVATAALDREHAVAARRVVAGVLAA
+PAARDAAAASRPLAAVVGAFMLGEPVPAADLAAALPALGLDGAVEAGLVVLDGADTGAER
+ARATVDLSPYAADEPGPMWVASDQTALQRRGPLPEDHVLGIGRASLTLAGATQRRPVARA
+LDLGVGCGVQTLHLLAHAEHVTATDLSERALDFTRFNLLLNADVLRLDRERLEDRVRLAA
+GDLLGPVAGERFDLVVSNPPFVITPRTDPDAPVLTYRDGGREGDRLVAELIAALPEHLVE
+GGTAQLLANWEIPAGAAEIPAGAAEVPAGDDAPPAWDARPRSWVGPGMQAWFVQRDRQDP
+AGYAETWLQDSSLELDPAAYEAAYRGYLDDFAARGVTGVGFGHVWLRRPAADRSQGRAWT
+VAEELTQPLDEALGTAWAAAVARRDRLAAGPEAGATDAVVTGDPALAALRGLHLRVAEDV
+TEERHSRFGAEHPEVILARQGAGFRRTARLDTATAGVLSASDGELSVGQLVGAVAALLEL
+DDAGRAGLLAAVRELHEDGFLLEA
+>3_1469
+MSPVPTPPSPPAPRLTPATAVALAADLAALPFTTAAVEGLLGPVATRALDREHAEAARRV
+VAGHLAGPGRHDDAAGPGDRHGTRGLAAAVGAWLLGDSVPAADLDAALPRLGLAGAVAAG
+LVVEGPDGRVRGAVDLSPYEADEPGRMWIASDLTALQRRGPLPPEHVLGVGRASLTLAGA
+TQRRPVARALDVGVGCGIQTLHLLAHADHVTATDLSERALAFTRFNLLLNADVLGLDRDR
+LEDRVRLAAGDLLAPVTGERFDLVVSNPPFVITPRTDPGAPVLIYRDGGREGDRIVAELI
+AALPDVLAEGGTAQLLANWEIPAGDTANADTAPWDARPRSWVAPGMQAWFLQRDRQDPAG
+YAETWLQDSSLELDPPAYEAAYRGYLDDFAARGVAGVGFGHVWLRRPAADGSQGRGWVVA
+EELTQPVDEALGAAWAAAVARRDRLAAGAGAGDAVGDPALAALRGLHLRVAADVTEERHQ
+RFGAEHPEVILARQGSGFRRVARLDTATAGVLSASDGELSVGQLVGAVAALLELDDVGRA
+GLLAALRELYEDGFLVEG
+>4_1683
+MSPVPTPPSPPAPRLTPATAVALAADLAALPFTTAAVEGLLGPVATLALDREHAEAARRV
+VAGHLAGPGRHDDAAGPGDRPGTRGLAAAVGAWLLGDPVPAADLDAALPSLGLAGAVAAG
+LVVEGPDGRVRGAVDLSPYEADEPGRMWIASDLTALQRRGPLPPEHVLGVGRASLTLAGA
+TQRRPVARALDVGVGCGIQTLHLLAHADHVTATDLSERALAFTRFNLLLNADVLGLDRER
+LEDRVRLAAGDLLAPVAGERFDLVVSNPPFVITPRTDPDAPVLTYRDGGGEGDRIVAELI
+AALPDVLAEGGTAQLLANWEIPAGDTADADTAPWDARPRSWVAPGMQAWLLQRDRQDPAG
+YAETWLQDSSLELDPPAYEAAYRGYLDDFAARGVAGVGFGHVWLRRPAADGSQGRAWVVA
+EELTQPVDEALGTAWAAAVARRDRLAAGAGAGDAVGDPALAALRGLHLRVAADVTEERHQ
+RFGAEHPEVILARQGSGFRRVARLDTATAGVLSASDGELSVGQLVGAVAALLELDDVGRA
+GLLAALRELYEDGFLVEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000698.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000698.fa
new file mode 100644
index 0000000000000000000000000000000000000000..95de6c3aaa2153f7addcc3eeec8441c393710190
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000698.fa
@@ -0,0 +1,31 @@
+>0_1032
+MAGSTAHLAPAPRFGSDIPVTLSSSSVFPLGTQDVFATAQDLGYDGVEVMVTHNAWSQDA
+DRLKRLSARHGMPIDSIHAPTLLFTQQVWGSAWSKIRRSVELAQAVGAPVVVAHPPFRWQ
+GTYASGFAEGIHEIMADTGVVIAVENMYPWRAHGREATMYLPHWDPMPEPYEHVCWDFSH
+AAIAREDSLEALRRLGSRVRHIHLTDGNDSGKDDHLVPGEGTQKVAESVRHLAADGFAGT
+VCVEVGTRGVEYAGQREEKLAASLAFAREHLAAGGTKDDDGAPGA
+>1_1758
+MADATAHLAPAARFGADIPVTLSSSSVFPLGTQDVFATAEDLGYDGVEVMVTHNAWSQDA
+RRLTRLSERHGMPIDSIHAPTLLFTQQVWGSAWSKIRRSVELAQAVGAATVVAHPPFRWQ
+GTYAVRFAEGIHELMAETGVVIAVENMYPWRAYGREAKMYLPHWNPLPEPYEHICWDFSH
+AAIARADSLAAVRELGPRLRHVHLTDGNDSGKDDHLVPGEGTQRVAETLRHLAAEGLAGA
+VCVEVGTRGVEYAGQREEKLAASLAFAREHLAAGGTDHHDDDGVPRPTTKETDRP
+>2_971
+MTGPSGAGSRPWDPHGRHLEPPLVSTAHLAPAPRFGAEIPVTLSSSSVFPLGTQDVFATA
+ADLGYDGVEVMVTHNATSQDARALARLSERTGMRIDSIHAPTLLFTQQVWGSAWSKIVRS
+VELARAVGAVTVVAHPPFRWQGSYASQFARRTAEIMEATGVVIAVENMYPWRAHGRDLTM
+YLPHWDPVPEPYEHVTWDFSHAAIAREDSLANIRGLGGRLRHVHLTDGVDGTKDAHLVPG
+EGTQNVAESLRFLGREGLAGTVCVEVGTRGVEYAGQREEKLSASLAFAREHLGQNDQSGR
+HES
+>3_1466
+MPDSTAHLAPAARFGADIPVTLSSSSVFPLGTQDVFATAEDLGYDGVEVMVTHNAWSQDA
+RRLTRLSERHGMPIDSIHAPTLLFTQQVWGSAWSKIRRSVELAQAVGAATVVAHPPFRWQ
+GTYAVRFAEGIHELMAETGVVIAVENMYPWRAYGRKAKMYLPHWNPLPEPYEHICWDFSH
+AAIARADSLAAVRELGPRLRHVHLTDGDDSGKDDHLVPGEGTQPVAETLRHLATAGLAGT
+VCVEVGTRGVEYAGQREEMLAASLAFAREHLAAGGTDHHHDGGVLRPTTKEMDRP
+>4_1680
+MPDSTAHLAPAARFGADIPVTLSSSSVFPLGTQDVFATAEDLGYDGVEVMVTHNAWSQDA
+RRLTRLSERHGMPIDSIHAPTLLFTQQVWGSAWSKIRRSVELAQAVGAATVVAHPPFRWQ
+GTYAVRFAEGIHELMAETGVVIAVENMYPWRAYGREAKMYLPHWNPLPEPYEHICWDFSH
+AAIARADSLAAVRELGPRLRHVHLTDGNDSGKDDHLVPGEGTQRVAETLRHLAAEGLAGA
+VCVEVGTRGVEYAGQREEKLAASLAFAREHLAAGGTDHHDDDGVPRPTTKETDRP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000702.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000702.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c7dc19c1e26a06da0c2206619bdf2d7837ae09b4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000702.fa
@@ -0,0 +1,40 @@
+>0_1040
+MSTTSQRPAPTPAAVVWDPSLLRYRFSAEHPMAPLRLDLTHRLVEAFGLLDAPHVSIIEP
+PVATDAQLALVHDPDYIAAVRRASEAASDEDAPFGLGTEDCPVFPDLHEASARIAGGTLA
+AAEAVWSGQVRRAVNFAGGMHHAARAKASGFCIYNDCALAIQRLLDLGAERVVYLDVDAH
+HGDGTQAIFYDDPRVMTISVHETGISLFPGTGFANEIGGPDAQGTAVNVAVPPRTGDAGF
+LRAVHAVVPQLLQGFDPDVIVSQHGCDGHHADPLADLRLSVDGQRQLAFDIGDWAEKFAD
+GRWVATGGGGYNPLRVVPRVWTHLTAAVLQTPIPVKAEIPQSWIEHARTLTAEELTGDMS
+LHEGDESERIPTVMGEDADVWWRSWEVGYDPADPVDQSIMATRRELFPLHGLDPWFD
+>1_1754
+MSTTSTPPAPTPAAVVWDSSLLRYRFSAEHPMAPLRLDLTHRLVEAFGLLDAPHVRIVEP
+PVATDEQLALVHDPEYVAAVRRAAATSSAEDGRFGLGTEDCPVFPDLHESAARIAGGSLV
+AAEAIWSGEVDRAVNFAGGMHHAARSSASGFCIYNDCAVAIQRLLDLGAERVAYVDVDAH
+HGDGTQSIFYDDPRVLTISLHETGISLFPGTGFANEIGGSAAQGTAVNVALPPRTGDAGF
+LRAAHAVVPPLLEAFAPDVLVSQHGCDGHLTDPLADLRLSVDGQRQLAFDVGDWADRFAY
+GRWLATGGGGYNPLRVVPRAWAHLTAAVLQTPIPVRSEIPAAWIEHVRALTADELTGDMS
+VHEGDDAERIPTVMGEDADVWWRSWEVGYDPADPVDQSIMATRREVFPLHGLDPWFD
+>2_976
+MTSATSDCSQPAPSAVVWDPSLLKYRFSAQHPMAPLRLDLTHRLASSLGLLDAEHVRILQ
+PPVATDEQLATVHDPAFIAAVRAASREDAEADEPHGLGSEDCPTFPDLHESAARIAGGSL
+VAAEAVWSGEVSRAVNVAGGMHHAARAKASGFCIYNDCAVAIQRLLDLGAERVAYVDVDA
+HHGDGTQSIFYDDPRVLTISLHETGISLFPGTGFANETGGPGAEGTAVNVALPPGTGDAG
+FLRAVHAVVPQLLGAFQPDVLVTQHGADAHRGDPLADLRLSVDGQRQLAFDLGDWADRYA
+HGRWLATGGGGYNHVRVVPRAWTHLIGAVTGQPVPSSTPVPESWLEHVRSLTPDDLEGDM
+SLFEGAEEDRYPLTMTEDADVWWRSWEVGYDPADPVDQTIMATRREVFPIHGLDPWFD
+>3_1462
+MSTTSTPPAPTPAAVVWDSSLLRYRFSAEHPMAPLRLDLTHRLVEAFGLLDAPHVRIVEP
+PVATDEQLALVHDPEYVAAVRRAAATSSAEDGRFGLGTEDCPVFPDLHESAARIAGGSLV
+AAEAIWSGEVDRAVNFAGGMHHAARSSASGFCIYNDCAVAIQRLLDLGAERVAYVDVDAH
+HGDGTQSIFYDDPRVLTISLHETGISLFPGTGFANEIGGSAAQGTAVNVALPPRTGDAGF
+LRAAHAVVPPLLQAFAPDVLVSQHGCDGHRTDPLADLRLSVDGQRQLAFDVGDWADRFAH
+GRWLATGGGGYNPLRVVPRAWAHLTAAVLQTPIPVKSEIPAAWIEHVRTLTADELTGDMS
+VHEGDDAERIPTVMGEDADVWWRSWEVGYDPADPVDQSIMATRREVFPLHGLDPWFD
+>4_1676
+MSTTSTPPAPTPAAVVWDSSLLRYRFSAEHPMAPLRLDLTHRLVEAFGLLDAPHVRIVEP
+PVATDEQLALVHDPEYVAAVRRAAATSSAEDGRFGLGTEDCPVFPDLHESAARIAGGSLA
+AAEAIWSGEVDRAVNFAGGMHHAARSSASGFCIYNDCAVAIQRLLDLGAERVAYVDVDAH
+HGDGTQSVFYDDPRVLTISLHETGISLFPGTGFANEIGGAAAQGTAVNVALPPRTGDAGF
+LRAAHAVVPPLLEAFAPDVLVSQHGCDGHRTDPLADLRLTVDGQRQLAFDVGDWADRFAH
+GRWLATGGGGYNPLRVVPRAWAHLTAAVLQTPIPVKSEIPAAWIEHVRALTADELTGDMS
+VHVGDDAERIPTVMGEDADVWWRSWEVGYDPADPVDQSIMATRREVFPLHGLDPWFD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000707.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000707.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ad33fd8d6135c61bc89223d3955a6c550df39be2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000707.fa
@@ -0,0 +1,20 @@
+>0_1048
+MGRYIIPAAIVLVGLTLYALFEALMTPAHEVRSLPKWGWVAVVVLLPLVGPLLWLVLGRA
+RVARGTARPAPRGPGAPDDDEAFLRSLRVQRCQAEREQELDRRDAELKAREEELRRRRER
+GEEPDADDPDAPTP
+>1_1745
+MGRFIIPAAIILAGLTLYALFEALLTPAREVRSLPKAAWVAVIVLVPLVGPLLWLLLGRA
+RPAGAGGRPAPRPTGAPDDDEAFLRSLRVQRRQVAREQDLDRREAELRAREEELRRRREQ
+GDDDADPDGDGPRA
+>2_985
+MARILVPTAILLVALTLFALFDALLTPAGRHRGMPKWAWIPTVLLLPLAGPLLWLFLGRP
+VPLFSGRTAAPASRPASPDDDDEFLRTLRVQRAQTERARNLDRREAELRAREEELRRRRE
+RGEDDATGEPDADA
+>3_1453
+MGRYIIPAAIVLVGLTLYALFEALMTPAHEVRSLPKWGWVAVVVLLPLVGPLLWLVLGRA
+RVARGTARPAPRGPGAPDDDEAFLRSLRVQRRQAEREQELDRRDAELKAREEELRRRRER
+GEEPDADDPDAPTP
+>4_1667
+MGRFIIPAAIILAGLTLYALFEALLTPAREVRSLPKAAWVAVIVLVPLVGPLLWLLLGRA
+RPAGAGGRTAPRPSGAPDDDEAFLRSLRVQRRQDAREQDLDRREAELRAREEELRRRREQ
+GDDDADPDGDGPRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000719.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000719.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9d6be664cadaa29a7f763af215126866e021449c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000719.fa
@@ -0,0 +1,31 @@
+>0_1076
+MVAMPRTARPPLRVPSWPWWAALAACVAGVVLLYAALVWSSAGQVLEYQVFRAVEERYAD
+TVPDLASRVVRLLPLTLAAGVALASLGALAVPRWRRRGLLALAALIGANLTTQLLKAVLP
+RPEHAAGVPFSGGNSLPSGHMTLAAGAAVAALLLVPARWRPVTAVLGTAVSALTGAVAYT
+EAWHRPSDMAAAALVAAGWGLLAVPLALHEDGPRPAPRGARAAEIGMWTVGAVGMAAGLV
+LLWLTLEAPAAAGASPHPAAEPAGILLSAAPVVLCWGALATAFRRSRTA
+>1_1723
+MPPTARAPRRLPSWTWWLALAACVAGVVLVYAALVWSSAGQVLEYQVFRAVEERYADTVP
+DVTSQVVRILPLALAVGMALASLGALAVARWRRRGLLALLVLAGSNLTTQLLKAALPRPE
+HADGVPWSGGNSLPSGHMTLATGAAVAALLLVPARWRPLTTVLGAVVSSCTGAVAYTEAW
+HRPSDMAAAALVSAAWGLLAVPFARYDGAPRPAPRGARGVEATLWSLGVAGLAAGLTLLA
+LTLDTPATSGAGPHPAAEPAGILLSASPAVLLWGALGTAFRRGRAD
+>2_1000
+MVGMTVTPPPGSPADAAARPVASSRRPRGSRWAWLLGLAAAAGVVALVHAVFVGTSGGQL
+LEYQVFHAVEDRWGTRSTGPAQRILTVLPVVLAGAATLAALACLIPRRTRRRGVVALVAL
+AGANVGTQALKESLGRPSFANHVPWAGGNSLPSGHTTLAASAAVAALLLVPARWRPAVAV
+VGAGATALTGSAAYLEAWHRPSDMAAAFGVAAFWAVLVAPWRRAADHRPRHASRAALAVE
+RMLWTLGVAGVLVGLGLAVATLGSPAVSADPHPLAAPAGALLSGTPALVLCAALLTGLRR
+AEQH
+>3_1440
+MPPTARAPRRLPSWTWWLALAACVAGVVLVYAALVWSSAGQVLEYQVFRAVEERYADTVP
+DVTSQVVRILPLALAVGMALASLGALAVARWRRRGLLALLVLVGSNLTTQLLKAALPRPE
+HADGVPWSGGNSLPSGHMTLAMGAAVAALLLVPARWRPLTTVLGAVVSACTGAVAYTEAW
+HRPSDMAAAALVSAAWGLLAVPFARYDGAPRPAPRGARGVEATLWSLGVAGLAAGLTLLA
+LTLGTPATSGAGPHPAAEPAGILLSASPAVLLWGALGTAFRRGRAD
+>4_1652
+MPPTARAPRRLPSWTWWLALAACVAGVVLVYAALVWSSAGQVLEYQVFRAVEERYADTVP
+DVSSQVVRILPLALAVGMALASLGALAVARWRRRGLLALLVLAGSNLTTQLLKAALPRPE
+HADGVPWSGGNSLPSGHMTLATGAAVAALLLVPARWRPLTTVLGAVVSSCTGAVAYTEAW
+HRPSDMAAAALVSAAWGLLAVPFARYDGAPRPAPRGARGVEATLWSLGVAGLAAGLTLLA
+LTLDTPATSGAGPHPAAEPAGILLSASPAVLLWGALGTAFRRGRAD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000721.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000721.fa
new file mode 100644
index 0000000000000000000000000000000000000000..eceedb2a79143615c6e32bf806a8d07bd8969a9a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000721.fa
@@ -0,0 +1,45 @@
+>0_1080
+MTAAPSSSPSESAPPPVVRRADVLISGGGPAGATAAAHLAAAGLDVVVLEKTAHPREKVC
+GDGLTPQAVRELQLLGVPHRGEPGDDGGWQVIRGLRLRAGERSVDVPWPETRSWPDYALT
+RTRRDFDALLADLARERGAEVRERHAVTSVVRDDAGRVCGLDAELIAPNGRKTGETARFE
+APVVLSCDGVSARAAVSAGIHRREDRPMGVAVRAYYTAGPAADGAVPAPPGDRGEWMESW
+LRLPDAQGRPLPGYGWLFPLADGTVNVGLGILDTSPQFGKLDYRGLLKSWSGALTPDWGI
+SEQTRVSKILGAALPMAFNRTPQHVPGMLLVGDAAGMVSPFNGEGIGFAMEAARIAADLA
+VQAHAAGSDAAADTVLSRYPVITQHLWGRHFALGARFARLIGDPRVMRASLGAGMAVPPL
+LRAVVKVMGNTVDPERGDAVDRAVRVLEALTPALTTADSAPLGRLAR
+>1_1718
+MTDTPTSPAPDSTSAVVRRADVLISGCGPAGATAAAHLAAAGLDVVVLEKTAHPREKVCG
+DGLTPQAVRELQLLGVPHRGEPGDDGGWRVIRGLRLRAGERSVDVPWAPTQTWPDYALTR
+TRRDFDALLADLARTRGAEVRERHAVTGVVRDEAGRVVGLDAELIAPNGRKTGETARFTA
+PIVLACDGVSARAAVSAGLHRREDRPMGVAVRAYYTAGAAVDGAIPAPPGDRGEWMESWL
+RLPDAEGNPLPGYGWLFPLADGTVNVGLGILDTSPQFGKLDYRGLLKSWTGALTADWGIA
+EQTRTSRILGAALPMAFNRTPQHVPGMLLVGDAAGMVSPFNGEGIGFAMEAARLAADLAV
+QAHAAGTDGAADAILSRYPVITQHLWGRHFALGARFARLIGDPRVMKAALGAGMAAPPLL
+RAAVKVMGNTVDARGGDAVDRAVRVLEALTPALTTAGGAPLGRLAR
+>2_1005
+MTEHPTPAAAPVVRRADVLISGAGPAGATAAAHLAAAGLDVVVLEKSAFPREKVCGDGLT
+PQAVQEIRNLGIEHQGGPGDDGGWHAVRGLRLRAGERSVDVPWPATQSWPDYALTRTRKD
+LDALLADTARARGAEVRERHAVTGVTRDDAGRVDGLEAELIAENGRKTGERVRFAAPLVL
+ACDGVSARAAVSMDVHRRTDRPMGVAVRAYYTAGPVGADGAVPRPPGDRVDWMESWLRLP
+DEHGNPLPGYGWLFPLADGTVNVGLGILDTSPLFGKLDYRALLKQWSGALSEDWGISEET
+RTSKILGAALPMAFNRTPQHVPGMLLVGDAAGMVSPFNGEGIGFAMEAARIAADLAVQAH
+AAPNTPAADAVLARYPVITQHLWGRHFRLGTVFARLIGEPRVMRAALATGMAVPPLLRTV
+ARVMGNVVDPSGGDAVDRAVRILESVTPSLTTADAPGVGRLAR
+>3_1435
+MTGTPTSPAPASTPAVVRRADVLISGCGPAGATAAAHLAAAGLDVVVLEKTAHPREKVCG
+DGLTPQAVRELQLLGVPHRGEPGDDGGWRVIRGLRLRAGERSVDVPWAPTQTWPDYALTR
+TRRDFDALLADLARTRGAEVRERHAVTGVVRDEAGRVVGLDAELIAPNGRKTGETARFTA
+PIVLACDGVSARAAVSAGLHRREDRPMGVAVRAYYTAGAAVDGAIPAPPGDRGEWMESWL
+RLPDAEGNPLPGYGWLFPLADGTVNVGLGILDTSPQFGKLDYRGLLKSWTGALTADWGIA
+EQTRTSRILGAALPMAFNRTPQHVPGMLLVGDAAGMVSPFNGEGIGFAMEAARLAAELAV
+QAHAAGTDGAADAILSRYPVITQHLWGRHFALGARFARLIGDPRVMKAALGAGMAAPPLL
+RAAVKVMGNTVDARGGDAVDRAVRVLEALTPALTTAGGAPLGRLAR
+>4_1647
+MTGTPTSPAPASTPAVVRRADVLISGCGPAGATAAAHLAAAGLDVVVLEKTAHPREKVCG
+DGLTPQAVRELQLLGVPHRGEPGDDGGWRVIRGLRLRAGERSVDVPWAPTQTWPDYALTR
+TRRDFDALLADLARTRGAEVRERHAVTGVVRDEAGRVIGLDAELIAPNGRKTGETARFTA
+PIVLACDGVSARAAVSAGLHRREDRPMGVAVRAYYTAGAAVDGAIPAPPGDRGEWMESWL
+RLPDAEGNPLPGYGWLFPLADGTVNVGLGILDTSPQFGKLDYRGLLRSWTGALTADWGIA
+EQTRTSRILGAALPMAFNRTPQHVPGMLLVGDAAGMVSPFNGEGIGFAMEAARLAADLAV
+QAHAAGTDGAADAILSRYPVITQHLWGRHFALGARFARLIGDPRVMKAALGAGMAAPPLL
+RAAVKVMGNTVDARGGDAVDRAVRVLEALTPALTTAGGAPLGRLAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000728.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000728.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3ba2977e1a54710c2bb937c829a0bf81fe33d30f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000728.fa
@@ -0,0 +1,20 @@
+>0_1088
+MASDSTFDVVSKVDSQEVSNALNQAQKEIAQRYDFKGVGAEIDFSGEKILMKASSEERVK
+AVKDVFESKLVKRGISLKSLDAGAPFASGKEYRIEASMKEGIDQPTAKKITKLIRDEGPK
+SVKAQIQGDELRVSSKSRDDLQEVIAMLKDFEDADLQFVNFR
+>1_1710
+MASDSTFDVVSKVDSQEVSNALNQAQKEIAQRYDFKGVGAEIDFSGEKILMRASSEERVK
+AVKDVFESKLVKRGISLKSLDAGAPFASGKEYRIEATMKEGIDQPTAKKITKLIRDEGPK
+SVKAQIQGDELRVSSKSRDDLQSVIAMLKDFEDADLQFVNFR
+>2_1015
+MASDSTFDVVSKVDKQEVSNALNQAQKEIAQRYDFKGVGAEIDFSGEKILMKANSEERVK
+AVLDVFESKLVKRGISLKSLDCGEPFASGKETRMEASIKEGIDQPTAKKITKLIRDEAPK
+SVKAVIQGDELRVSSKSRDDLQETIALLKTFEDADLQFINFR
+>3_1427
+MASDSTFDIVSKVDSQEVSNALNQAQKEIAQRYDFKGVGAEIDFSGEKILMKASSEERVK
+AVKDVFESKLVKRGISLKSLDAGAPFASGKEYRIEATMKEGIDQPTAKKITKLIRDEGPK
+SVKAQIQGDELRVSSKSRDDLQSVIAMLKDFEDADLQFVNFR
+>4_1639
+MASDSTFDVVSKVDSQEVSNALNQAQKEIAQRYDFKGVGAEIDFSGEKILMKASSEERVK
+AVKDVFESKLVKRGISLKSLDAGAPFASGKEYRIEATMKEGIDQPTAKKITKLIRDEGPK
+SVKAQIQGDELRVSSKSRDDLQSVIAMLKDFEDADLQFVNFR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000732.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000732.fa
new file mode 100644
index 0000000000000000000000000000000000000000..63407170d1eeaa9171891b7aa58778158885f9f5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000732.fa
@@ -0,0 +1,40 @@
+>0_1093
+MTTHEQRPAGFGTRAVHAGQDLDEVYGAVVPPVHLSSTYAPVRVGELRRGYDYGRGTNPT
+RDALQTQLAALEAGVGEDGTPNALALTFASGLAAETALIMGAAEPGTTIVMGNDVYGGSY
+RLISKVLAKWGIRHAVVDMGDTAKVAAAVESAAAQGPVMVWLETPSNPLMKVSDIAAIAE
+VAHGHDALLVVDNTFATPYLQTPLALGADVVVHSTTKYIGGHSDVIGGALVIKDPELGAQ
+VQFQQFAAGAVNGPWDAYLTTRGLKTLGVRMDRHQANAQAVAEWLAGRPEVTQVLYPGLP
+DHPDHELAARQMRGFGGMVSFRLTGGAAAARTVAESTRLFQLAESLGGIESLMNYPAEMT
+HASVAGTELAVPDDLLRLSVGIEDAEDLVADLERALEALAG
+>1_1705
+MTEQNVHEDPHATTPDTGAEDAAAHPQGGGFGTRAVHAGQHLDEVFGAVVPPIHLSSTYA
+PTAVGELRRGYDYGRGTNPTRDALQEQLAALEAGVDESGAPRATGLTFASGLAAETALIM
+GAGRPGMTIVLGNDVYGGSYRLISRVLAPWGVEHVVVDMGDAEQVAAAVERAAAAGPVMV
+WLETPSNPMMKISDVAAVAEAAHAHGALLVVDNTFATPYLQSPIALGADVVVHSTTKYIG
+GHSDVIGGALVIPDAALAEQVKFQQFAAGAVNGPMDAYLTTRGLKTLGVRMDRHQANAQA
+VAEWLTGRAEVSQVLYPGLPDHPGHELAQRQMRGFGGMVSLRLSGGAAAARRVAESTRLF
+QLAESLGGIESLMNYPAEMTHASVAGTELAVPDDLLRLSVGIEDAEDLVADLERALGSL
+>2_1019
+MTEQNAHEQPHDTAPTGPEATEGPAEGFGTRAVHAGQHLDEVYGAVVPPLHISSTYAPTA
+IGELRRGYDYGRGTNPTRDALQEQLAALEAGVDDAGTPKATGLTFASGLAAETALIMGAG
+QPGMTIVMGNDVYGGSYRLISRVLKPWGVDHAVVDMGEPEQVAAAVEQAAASGPVMVWLE
+TPSNPMMKISDVAAVAEAAHGRGAQLVVDNTFATPYLQNPIALGADVVVHSTTKYIGGHS
+DVIGGALVIPDAELAEKVKFQQFAAGAVNGPVDAYLTTRGLKTLGVRMDRHQANAQALAE
+WLTEQSAVSQVLYPGLPDHPGHELAKRQMRGFGGMVSVRFHGGAAAAKKVAESTRLFQLA
+ESLGGIESLMNYPAEMTHASVAGTELAVPDDLVRLSVGIEDASDLIADLEQAIAGLAG
+>3_1422
+MTEQNVHEDPHATTPDTGAEDAAAHPRGGGFGTRAVHAGQHLDEVFGAVVPPIHLSSTYA
+PTAVGELRRGYDYGRGTNPTRDALQEQLAALEAGVDESGAPRATGLTFASGLAAETALIM
+GAGRPGMTIVLGNDVYGGSYRLISRVLAPWGVEHVVVDMGDAEQVAAAVERAAAAGPVMV
+WLETPSNPMMKISDVAAVAEAAHAHGALLVVDNTFATPYLQSPIALGADVVVHSTTKYIG
+GHSDVIGGALVIPDAALAEQVKFQQFAAGAVNGPMDAYLTTRGLKTLGVRMDRHQANAQA
+VAEWLTGRAEVSQVLYPGLPDHPGHELAQRQMRGFGGMVSLRLSGGAAAARRVAESTRLF
+QLAESLGGIESLMNYPAEMTHASVAGTELAVPDDLLRLSVGIEDAEDLVADLERALGSL
+>4_1634
+MTEQNVHEDPHATTPDTGAEDAAAHPRGGGFGTRAVHAGQHLDEVFGAVVPPIHLSSTYA
+PTAVGELRRGYDYGRGTNPTRDALQEQLAALEAGVDESGAPRATGLTFASGLAAETALIM
+GAGRPGMTIVLGNDVYGGSYRLISRVLAPWGVEHVVVDMGDAEQVAAAVERAAATGPVMV
+WLETPSNPMMKISDVAAVAEAAHAHGALLVVDNTFATPYLQSPIALGADVVVHSTTKYIG
+GHSDVIGGALVIPDAALAEQVKFQQFAAGAVNGPMDAYLTTRGLKTLGVRMDRHQANAQA
+VAEWLTGRAEVSQVLYPGLPDHPGHELAQRQMRGFGGMVSLRLSGGAAAARRVAESTRLF
+QLAESLGGIESLMNYPAEMTHASVAGTELAVPDDLLRLSVGIEDAEDLVADLERALGSL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000733.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000733.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9ca8e4af6520ec72bfcb5cae43e504454e9bff83
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000733.fa
@@ -0,0 +1,40 @@
+>0_1094
+MTVTAFVNAHVVPVESAPFDGALIVEDGRITALGPDVAAPEGADVVDCEGKWLLPGFVDA
+HVHLGMHAEGEVGTTSDVNEMTDPVMAGVRAIDAVDPNEPGWRDALAGGVTTVNVNPGSG
+NPIGGQAVALHTHGRTVDEMVLRSPSGVKSALGENPKNVYKEKGRTPSTRLGTALVIREA
+FLKAQGYLARQEEAEREGKPFTKDPHMEALGQVLRREIPWRQHCHRTDDIATALRIADEF
+GYELVLDHGTEAHPVADLLAERGVPVLIGPLFTTKSKPELRGRSMRNPGRLARAGVEISI
+ITDHPVIPIDFLVYQAALSVKEGLDPETALRAITLNPAKVLGLDDRIGSLAVGKDADLVL
+WSGDPLDVMQRALRVWIGGRCVMEYDLATARPVVASARPVED
+>1_1704
+MTLTAFVNAHVVPVAAEPFDGALLVEDGRITALGPDVEAPDGAEVVDCEGRWVLPGFVDA
+HVHLGMHAEGEVGATADVNEMTDPVMAGVRAIDAVDPNEPGWKDALAGGVTTVNVNPGSG
+NPIGGQAVALHTHGRTVDEMVLRSPSGVKSALGENPKNVYKEKGRTPSTRLGTALVIREA
+FLRAQGYMARRAEAEREDKPFTRDPHLDALALVLERTIPWRQHCHRTDDVATALRLADEF
+GYDLVLDHGTEAHPLAGQLAARGVPVLIGPLFTTKSKPELRGRSMRNPGRLARAGVEISI
+ITDHPVVPIDFLVYQAALSVKEGLDRETALRAITLHPARVLGLDDRIGSLEVGKDADLVL
+WSGDPLDVMQRALRVWIGGRQVMEYDLATARPVVASARPVED
+>2_1020
+MSITAFTNVHVVPVESDPFDGVLLAEDGRISALGPDVEIPAGADVVDCGGRWLLPGFVDA
+HVHLGMHAEGEVGATADVNEMTDPVMAGVRALDAVDPNEPGWRDALAGGITTVNVNPGSG
+NPIGGQAVAMHTHGRTVDEMVLRAPSGVKSALGENPKTVYKEQGRTPSTRLGTALVIRRA
+FMEAQGYMARRTEAEADGKPFTKDPHMEALALVLERRIPWRQHCHRTDDVATALRIADEF
+GYDLVLDHGTEAHPLADVLAERGVPVLIGPLFTTKSKPELRGRSLRNPGRLARAGVEISI
+ITDHPVVPIDFLVYQAALAVKEGLDRDTALRAITLNPAKVLGLADRIGSLAPGKDADLVL
+WSGDPLDVMQRALRVWIGGRPVMEYDAAAARPVVASARPAED
+>3_1421
+MTLTAFVNAHVVPVAAEPFDGALLVEDGRITALGPDVEAPDGAEVVDCEGRWVLPGFVDA
+HVHLGMHAEGEVGATADVNEMTDPVMAGVRAIDAVDPNEPGWKDALAGGVTTVNVNPGSG
+NPIGGQAVALHTHGRTVDEMVLRSPSGVKSALGENPKNVYKEKGRTPSTRLGTALVIREA
+FLRAQGYMARRAEAEREDKPFTRDPHLDALALVLERTIPWRQHCHRTDDVATALRLADEF
+GYDLVLDHGTEAHPLAGQLAARGVPVLIGPLFTTKSKPELRGRSMRNPGRLARAGVEISI
+ITDHPVVPIDFLVYQAALSVKEGLDRETALRAITLHPARVLGLDDRIGSLEVGKDADLVL
+WSGDPLDVMQRALRVWIGGRQVMEYDLATARPVVASARPVED
+>4_1633
+MTLTAFVNAHVVPVAAEPFDGTLLVEDGRITALGPDVEAPDGAEVVDCEGRWLLPGFVDA
+HVHLGMHAEGEVGATADVNEMTDPVMAGVRAIDAVDPNEPGWKDALAGGVTTVNVNPGSG
+NPIGGQAVALHTHGRTVDEMVLRSPSGVKSALGENPKNVYKEKGRTPSTRLGTALVIREA
+FLRAQGYMARRAEAEREDKPFTRDPHLDALALVLERTIPWRQHCHRTDDVATALRLADEF
+GYDLVLDHGTEAHPLADQLAARGVPVLIGPLFTTKSKPELRGRSMRNPGRLARAGVEISI
+ITDHPVVPIDFLVYQAALSVKEGLDRETALRAITLHPARVLGLDDRIGSLEVGKDADLVL
+WSGDPLDVMQRALRVWIGGRQVMEYDLATARPVVASARPVED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000737.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000737.fa
new file mode 100644
index 0000000000000000000000000000000000000000..90033875671e560db70c69681389069f5a6dbdc0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000737.fa
@@ -0,0 +1,20 @@
+>0_1098
+MSVNPDVAGRSYPPAPPFQVGREAVRAFASAVQAQHPAHHDVEAARALGHADLLAPPTFA
+VVIAQRAEAAAVNDPEVGIDFSRVVHADERFVHHRPLVAGDEVVATVRIASVKSLGGNDM
+VTTVTEIADADGAPVSTVTSTLLVRGEES
+>1_1700
+MSVNPDVAGRSYPPAPPFQVGREAVRGFAEAVQAQHPAHHDVAAARALGHADLVAPPTFA
+VVIAQRAEAAVVADPELGIDFSRVVHADERFVHHRPLVAGDEVVATVRVEAVKSLGGNRM
+VTTVTEIADLDGAAVSTVTSTLLVRGEES
+>2_1024
+MSETESLVGRTYPPAPPYQVGREAVRAFADAVQAAHPAHTDVDAARALGYADVVAPPTFA
+VVVAQRAEAAVVADPEAGIDFSRVVHADERFTHHRPIVAGDELTATVLIEAVKELGGNRM
+VTTVTEIVDAAGAPVSDVASTLLVRGEES
+>3_1417
+MSVNPDVAGRSYPPAPPFQVGREAVRGFAEAVQAQHPAHHDVAAARALGHADLVAPPTFA
+VVIAQRAEAAVVADPELGIDFSRVVHADERFVHHRPLVAGDEVVATVRVEAVKSLGGNRM
+VTTVTEIADLDGAAVSTVTSTLLVRGEES
+>4_1629
+MSVNPDVAGRSYPPAPPFQVGREAVRGFAEAVQAQHPAHHDVAAARALGHADLVAPPTFA
+VVIAQRAEAAVVADPELGIDFSRVVHADERFVHHRPLVAGDEVVATVRVEAVKSLGGNRM
+VTTVTEIADLDGAPVSTVTSTLLVRGEES
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000739.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000739.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ae8486b5495012be4d50f3c91c33ce782772a7a0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000739.fa
@@ -0,0 +1,40 @@
+>0_1100
+MSERLAEHTTTRVGGPARAWETARTEAEAIEAVRAADAAGEPLFVLGGGSNTLMADAGFP
+GTVVRLAFEGIEVRAGDEAHGGDADDQDPAAGGDRAGEAVVVRVAAGHPWDDAVAWTVEH
+GLGGIEALSGIPGSAGATPVQNVGAYGADVSQVLVSLRAWDREAGQVVELGAEELEFDYR
+DSIIKRSMLETGAPSPRWIVLSIDLRLRRASGAAEPTAPVRYGQLASALDVAEGTHAPLA
+VVRREVLALRAAKGMVSDPQDPDTWSTGSYFTNPIVPAAVRASLPEGAPAFAAGRAADGT
+ELVKLSAAWLIDHAGFAKGFGLPDVAPREGGPDGRGADGAGLAGGRASVSTKHTLAMTNR
+GDASTEDVLTIARTVRDGVKARFGVDLHPEPMIIGTSL
+>1_1698
+MSERLADHTTTRVGGPARAWVTARTEAEAIEAVRAADAAGEPLFVLGGGSNTLMADAGFP
+GTVVRLAFEGIHVLDGPLPGEGETPPAGDGARSADHEGEAVVVRIAAGHPWDDAVAWTVA
+HGLGGIEALSGIPGSAGATPVQNVGAYGADVSQVLVALRAWDREAGDVVELTPADLRFGY
+RDSVIKRSMLETGAPSPRWIVLSIDLRLRRASSDAEPTAPVRYGQLAAALDVEEGAHAPL
+AVVRREVLALRAAKGMVSDPADPDTWSTGSYFTNPIVPASVRASLPDGAPAFAAGQAEDG
+TPLVKLSAAWLIDRAGFAKGFGLPEVAPREGGPDGRGADGTGLAGGRASVSTKHTLAMTN
+RGDATTEDVLTVARTVRDGVRERFGVELHPEPMIIGTSL
+>2_1026
+MSERLSDHTTTRVGGPARAWVEARTEAEAVAAVRAADAAGEPLFVLGGGSNTLMADAGFE
+GTVVHMGFTGVEVLPAEGAADGAGDVVVRVAAGHVWDEAVAWTVEHGLAGVEALSGIPGS
+AGATPVQNVGAYGADVSQVLVSLRAFDRAAGQVVELSAEDLRFGYRDSVIKRSMFEDGSP
+SPRWIVLSIDLRLRRAEEGAEPTAPVRYAQLARALEVEEGADVSLAQVREHVLALRASKG
+MVSDAADHDTWSTGSYFTNPIVPATVRVTLPEGAPAFAAGTDEDGTPLVKLSAAWLIDHA
+GYGKGFGLPDAPRREGDADGSGPDGRGLAGGRAALSTKHTLAVTNRGGASTEDVLTVARA
+VRDGVKARFGVDLHHEPMIIGTRL
+>3_1415
+MSERLADHTTTRVGGPARAWVTARTEAEAIEAVRAADAAGEPLFVLGGGSNTLMADAGFP
+GTVVRLAFEGIHVLDGPLPGEGETPPAGDGARSADHEGEAVVVRIAAGHPWDDAVAWTVA
+HGLGGIEALSGIPGSAGATPVQNVGAYGADVSQVLVALRAWDREAGDVVELTPADLRFGY
+RDSVIKRSMLETGAPSPRWIVLSIDLRLRRASSDAEPTAPVRYGQLAAALDVEEGAHAPL
+AVVRREVLALRAAKGMVSDPADPDTWSTGSYFTNPIVPASVRASLPDGAPAFAAGQAEDG
+TPLVKLSAAWLIDRAGFAKGFGLPEVAPREGGPDGRGADGTGLAGGRASVSTKHTLAMTN
+RGDATTEDVLTVARTVRDGVRERFGVELHPEPMIIGTSL
+>4_1627
+MSERLADHTTTRVGGPARAWVTARTEAEAIEAVRAADAAGEPLFVLGGGSNTLMADSGFP
+GTVVRLAFEGIGVLDGPVPGEGEAPPVGDGARLADHEGEAVVVRVAAGHPWDDAVAWTVA
+HGLGGIEALSGIPGSAGATPVQNVGAYGADVSQVLVALRAWDREAGDVVELTPADLRFGY
+RDSVIKRSMLETGAPSPRWIVLSIDLRLRRASSDAEPTAPVRYGQLAAALDVEEGAHAPL
+AVVRREVLALRAAKGMVSDPADPDTWSTGSYFTNPIVPASVRASLPDGAPAFAAGQAEDG
+TPLVKLSAAWLIDRAGFAKGFGLPEVAPREGGPDGRGADGTGLAGGRASVSTKHTLAMTN
+RGDATTEDVLTVARTVRDGVRERFGVELHPEPMIIGTSL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000748.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000748.fa
new file mode 100644
index 0000000000000000000000000000000000000000..107576163c83eed3b9c3ef87a4e691ffed4b9ada
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000748.fa
@@ -0,0 +1,10 @@
+>0_1109
+MDTLLALEIFFLALVVLAGLGMAAVAAVVVGGLFKGQR
+>1_1689
+MDTLLALEIFFLALVVLAGLGMAAVAAVVISGLFKGQR
+>2_1039
+MDSIVALEIFFLVLVVLAGLGMAAVAALVVGGLFKGQR
+>3_1406
+MDTLLALEIFFLALVVLAGLGMAAVAAVVISGLFKGQR
+>4_1618
+MDTLLALEIFFLALVVLAGLGMAAVAAVVISGLFKGQR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000749.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000749.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0c226059953d86851f8e5811a44f72f4e8c06d64
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000749.fa
@@ -0,0 +1,25 @@
+>0_1110
+MATELPYDLTPELAPLSWLIGSWEGQGRLGDGSDGTEIFYQRVDFTEHGLPFVEYRAESW
+LCEADGTLLRPLTVESGFWQVDRERRDGDVGPGMRPADIVPAFRSAEDVESLRAGDEGFG
+ITATITHPGSLAELYYGRIKGPQLQLVTDAVLRGSAAGDYHRATRMAGLVNGQLFWRWDS
+SGSEGAELEAHASAILDRMPSESEGRLAPGAPRPRGAGGAEPGERP
+>1_1688
+MATELPYDLTPELAPLSWLIGSWEGQGRLGDGSAGTEIFYQRVDFTEHGLPFVEYRAESW
+LCEADGTLLRPLTVESGFWQVDRARRDGDVGPGMRPADIVPAFRSAEDVERLRAGDEGFG
+LTATITHPGSLSELYYGRIKGPQLQLATDAVLRGSAAGPYHRATRMAGLVNGQLFWRWDV
+ADAAGAELEAHASAILDRMPSAAEGRLAPGAERPRGARGEQS
+>2_1040
+MATELPYDLTPELAPLSWLIGSWEGQGRLGDGSEGTDIFYQRVDFVEHGLPFVEYRAESW
+LCEADGTLLRPLTVESGFWQVDRARQDGDVGPGMVPADIVPAYRSAEDVEALRSEDGAFR
+ITATITHPGSLAELYYGRIKGPQVQIVMDSLLRGAAAGEYARATRMAGLVNGQLFWRWDS
+SPAVEGPMEVHASAILDRMPDPSEGRLAPGAPRPRGERGRAPEQGA
+>3_1405
+MATELPYDLTPELAPLSWLIGSWEGQGRLGDGSAGTEIFYQRVDFTEHGLPFVEYRAESW
+LCEADGTLLRPLTVESGFWQVDRARRDGDVGPGMRPADIVPAFRSAEDVERLRAGDEGFG
+LTATITHPGSLSELYYGRIKGPQLQLATDAVLRGSAAGPYHRATRMAGLVNGQLFWRWDV
+ADAAGAELEAHASAILDRMPSAAEGRLAPGAERPRGARGEQS
+>4_1617
+MATELPYDLTPELAPLSWLIGSWEGQGRLGDGSAGTEIFYQRVDFTEHGLPFVEYRAESW
+LCEADGTLLRPLTVESGFWQVDRARRDGDVGPGMRPADIVPAFRSAEDVERLRAGDEGFG
+LTATITHPGSLSELYYGRIKGPQLQLATDAVLRGSAAGPYHRATRMAGLVNGQLFWRWDV
+ADAAGAELEAHASAILDRMPSAAEGRLAPGAERPRGARGEQS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000750.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000750.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f24fab92a1df2a247dc64a0ec71fad61d1132cae
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000750.fa
@@ -0,0 +1,40 @@
+>0_1111
+MTGAEPAQRSPLLDLASAEPHGPAGGAVEGVGPDAGVAAHYGRPLPEQRALARGRALVDL
+SHRAVLSVSGPDRLTWLHTLGTQHVADLPAGTSTEILFLDAQGRIEHAAHLLEDGTAAWL
+VTDREDGPGLAAWLASMRFSHQVTLRDHTGAVAVVGSTAPVPGWEDRTVWVDPWPHVGVG
+GWAYTADPRPESHPGADWSWREHLVTRADLEATVRTLGTGPLEGWSLAGTTAAEALRIEA
+GRPRMATDVDERALPHELDLLRTAVHLEKGCYRGQETVARVHNLGRPPRRLTRLMLDGSV
+HALPPHGAPVILRPAEDTPQARAAARPVGAVTSSAQHHEAGAVALALLKRSVPVDAELLV
+CEDLPGDAEAGDAADAAETGWIAAAQEPLVSPAAGQVVGRPRGVGRLR
+>1_1687
+MTTSRSPLLDLAVAEPQGPAGGAVEGRGPDAGVAAHYGRPLPEQRALARGRALVDLSHRA
+VLSVSGPDRLSWLHTLGTQHVETLPPGTSTEILFLDVQGRIEHAAHLLEDGTAAWLVTDR
+EDGPGLAAWLTSMRFSHDVTLRDHTGAVAVVGATAPVPGWEDRTVWLDPWPRVGAGGWAY
+TADPDPATHPGADWSWREYLVTRADLEATVRALGTGVLAGWSLAGTTAAEALRIEAGRPR
+RALDVDDRAIPHELDLLRTAVHLEKGCYRGQETVARVHNLGRPPRRLTRLLLDGSGHALP
+EHGAPVILRPAEDTPEARAAARPVGTVTAAAQHHEAGAVALALLKRTVPVDAELLVREDA
+PGEDGVAEGGWIAASQEPLVSPDAGQVVGRPRGVGRLR
+>2_1041
+MTEPRPEPAPAVRAARRSPLLAPPPAAPGGPAEGAVEGVGQDAGVAAHYGRPLVEQRALA
+RGRALVDLSQKTVVSVSGPDRLSWLHTLSTQHLKDRPAGTSTEALFLDANGRIEIAVHLL
+EDGAAAWLIADPAHADVLVTWLRSMVFSHRVTLRDHTGVVAVVGAMAPVPGWEDRTVWLD
+PWPRVDVGGWPYSPDPDPAAHPGAGWSWREYLVTRGDLVATVDRLGTGELEGWSLAGALA
+AEALRIEAGRPRPAVDADARAIPHELDILRTAVHLEKGCYRGQETVARVYNLGRPPRRLT
+QLLLDGSSHALPAAGAAVILRPEPDTADARAAARPVGTVTSAVQHHEAGAVALAVLKRAV
+PVAAELLVREEAAGGGEPEWIAASQQALVSPDAGQVVGRPAGLSRRA
+>3_1404
+MTTSRSPLLDLAVAEPQGPAGGAVEGRGPDAGVAAHYGRPLPEQRALARGRALVDLSHRA
+VLSVSGPDRLSWLHTLGTQHVETLPPGTSTEILFLDVQGRIEHAAHLLEDGTAAWLVTDR
+EDGPGLAAWLTSMRFSHDVTLRDHTGAVAVVGATAPVPGWEDRTVWLDPWPRVGAGGWAY
+TADPDPATHPGADWSWREYLVTRADLEATVRALGTGVLAGWSLAGTTAAEALRIEAGRPR
+RALDVDDRAIPHELDLLRTAVHLEKGCYRGQETVARVHNLGRPPRRLTRLLLDGSGHALP
+EHGAPVILRPAEDTPEARAAARPVGTVTAAAQHHEAGAVALALLKRTVPVDAELLVREDA
+PGEDGVAEGGWIAASQEPLVSPDAGQVVGRPRGVGRLR
+>4_1616
+MTTSRSPLLDLAVAEPQGPAGGAVEGRGPDAGVAAHYGRPLPEQRALARGRALVDLSHRA
+VLSVSGPDRLSWLHTLGTQHVETLPPGTSTEILFLDVQGRIEHAAHLLEDGTAAWLVTDR
+EDGPGLAAWLTSMRFSHDVTLRDHTGAVAVVGATAPVPGWEDRTVWLDPWPRVGAGGWAY
+TADPDPATHPGADWSWREYLITRADLEATVRALGTGVLAGWSLAGTTAAEALRIEAGRPR
+RALDVDDRAIPHELDLLRTAVHLEKGCYRGQETVARVHNLGRPPRRLTRLLLDGSVHALP
+EHGAPVILRPAEDTPEARAAARPVGTVTAAAQHHEAGAVALALLKRTVPVDAELLVREDA
+PGEDGAAEGGWIAASQEPLVSPDAGQVVGRPRGVGRLR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000755.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000755.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b8b1ccca7a2a43f5098eb608aacfcef8fb76b04b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000755.fa
@@ -0,0 +1,25 @@
+>0_1117
+MSVPAPRTAVIVDDHAIFRSGLRADLDPARLAIVGEAGDVDEAVRAVLELAPDVVLLDVH
+LPGGAGGGGAEVAERVLARRPAQRFLALSVSDAAEDVVAVIRAGARGYITKTASGAEVVD
+AAVRVAGGDAVFSPRLAGFVLDAFRGAAAPAAAPASPAVPDEDVDRLSAREREVMRLIAR
+GYTYREAGAELFISDRTVETHVSSVLRKLQLSNRHELTRWAARRGYA
+>1_1682
+MTDPAPRTAVNVDDHAIFRSGLRADLDPDRLAIVGEAGDVDEAVRAVLDLAPDVVLLDVH
+LPGGAGGGGAEVAERVLARRPAQRFLALSVSDAAEDVVAVIRAGARGYITKTASGAEVAD
+AAVRVADGDAVFSPRLAGFVLDAFRGTAPASPPVPAAATSGAAAPDEDLDRLSAREREVM
+RLIARGYTYREAGAELFISDRTVETHVSSVLRKLQLSNRHELTRWAARRGYA
+>2_1047
+MTVHADPVVPTAVVVDDHAIFRSGLRADLDASRLRIVGEAGDVDEAVRVVLQLAPDVVLL
+DVHLPGGAGGGGAEVASRVLAERPGQRLLALSVSDAAEDVVAVIRAGARGYITKSAAGAE
+VVEAALRVAGGDAVFSPRLAGFVLDAFRGLPTESAPAGPAPSEGDLDRLSAREREVMRLI
+ARGYTYREAGAELFISDRTVESHVSSVLRKLQLSNRHELTRWAARHGWA
+>3_1399
+MTDPAPRTAVIVDDHAIFRSGLRADLDPDRLAIVGEAGDVDEAVRTVLDLVPDVVLLDVH
+LPGGAGGGGAEVAERVLARRPAQRFLALSVSDAAEDVVAVIRAGARGYITKTASGVEVAD
+AAVRVADGDAVFSPRLAGFVLDAFRGTAPASPPVPAAATSGAAAPDEDLDRLSAREREVM
+RLIARGYTYREAGAELFISDRTVETHVSSVLRKLQLSNRHELTRWAARRGYA
+>4_1611
+MTDPAPRTAVIVDDHAIFRSGLRADLDPDRLAIVGEAGDVDEAVRTVLDLAPDVVLLDVH
+LPGGAGGGGAEVAERVLARRPAQRFLALSVSDAAEDVVAVIRAGARGYITKTASGAEVAD
+AAVRVADGDAVFSPRLAGFVLDAFRGTAPAPPLVPAAAASGAAAPDEDLDRLSAREREVM
+RLIARGYTYREAGAELFISDRTVETHVSSVLRKLQLSNRHELTRWAARRGYA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000758.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000758.fa
new file mode 100644
index 0000000000000000000000000000000000000000..55f9d3235d8b6ae22c449befa0b15b72a1b42d40
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000758.fa
@@ -0,0 +1,30 @@
+>0_1120
+MSEQELDRQAAEESVSVQEDGAVEETVETAQDAPAPAEDAAGETAVDGEEAAEATEATAQ
+EADPAAVEQAEEEPAVDPGEELRTRLRRQPGDWYVVHTYAGYEKRVKTNLEARILSQDME
+DAIYEIEVPMEEVVEIKNTTRKIVSRVRIPGYVLVRMDLDDASWGVVRHTPGVTGFVGND
+AHHPQPLSLDEVYDMLAPSVIQEAARAAEKAGLAVPASAESGAAAAPAIHVDFEVGESVT
+VNDGPFETLPATISEIKPEAQQLVVLVSIFERETPVTLSFNQVTKVI
+>1_1679
+MSEQELDRQPAEESVPMSEDAVAEETAETAQDAGTPVEDALDEVAGSGDETAEATVQEAD
+LAVAEGEDAPTPVEEQSDDEPAVDPAEELRTRLRRQPGDWYVVHTYAGYEKRVKTNLEAR
+ILTQDMEDSIYEIEVPMEEVVEIKNTTRKIVSRVRIPGYVLVRMDLDDASWGVVRHTPGV
+TGFVGNDAHHPQPLSLDEVYDMLAPSVIQEAARAAEKAGLAVPAAAESGAPAAPAIHVDF
+EVGESVTVNDGPFETLPATISEIKPEAQQLVVLVSIFERETPVTLSFNQVTKAI
+>2_1050
+MSEQELDRQDVEETAVAEDSTALEAPVEDTAAEEAEQTVQEADLAIAEGDQDAAEAPSAE
+ELDAAGQAPAQPDVEAAEQLRTRLRRQPGDWYVVHTYAGYEKRVKTNLEARIQTQDMEDS
+IYEIEVPMEEVVEIKNTTRKIVSRVRIPGYVLVRMDLDDASWGVVRHTSGVTGFVGNDAH
+HPQPLTLDEVYDMLAPSVVQEAVREAEKAGLVPVAVAESGAAGAPAIHVDFEVGESVTVD
+DGPFETLPATISEIKPETQQLVVLVSIFERETPVTLSFNQVTKVI
+>3_1396
+MSEDAVAEETAETAQDAGTPVEDALDEAAGSGDETAEATVQEADLAVAEGEDAPTPVEEQ
+ADDEPAVDPAEELRTRLRRQPGDWYVVHTYAGYEKRVKTNLEARILTQDMEDSIYEIEVP
+MEEVVEIKNTTRKIVSRVRIPGYVLVRMDLDDASWGVVRHTPGVTGFVGNDAHHPQPLSL
+DEVYDMLAPSVIQEAARAAEKAGLAVPALVESGAPAAPAIHVDFEVGESVTVNDGPFETL
+PATISEIKPEAQQLVVLVSIFERETPVTLSFNQVTKAI
+>4_1608
+MSEDAVAEETAQDAGTPVEDALDEPAGSGDETAEATVQEADLAVAEGEDAPTPVEEQSDD
+EPAVDPAEELRTRLRRQPGDWYVVHTYAGYEKRVKTNLEARILTQDMEDSIYEIEVPMEE
+VVEIKNTTRKIVSRVRIPGYVLVRMDLDDASWGVVRHTPGVTGFVGNDAHHPQPLSLDEV
+YDMLAPSVIQEAARAAEKAGLAVPAAAESGAPAAPAIHVDFEVGESVTVNDGPFETLPAT
+ISEIKPEAQQLVVLVSIFERETPVTLSFNQVTKAI
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000763.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000763.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d0ec0cd18ddf12820388980ffea7b91dda6d01e4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000763.fa
@@ -0,0 +1,105 @@
+>0_1125
+MVASSTSNETATVSPRSGASAGRISFAKISEPLDVPDLLALQTESFDRLIGNERWVARVE
+EAQAADDHSVPVTSGLTDIFEEISPIEDFQGTMSLSFSEPEFADAKMTEEECKDRDATYA
+APLYVKAEFMNNTTGEIKQQTVFMGDFPLMTRNGTFIINGTERVVVSQLVRSPGAYFERT
+PDKTSDKEIFSAKIIPSRGAWFELEVDKRDQVGVRLDRKRKQPVTVLLKAMGWTESRILE
+EFGHYDSIRATLEKDGTADQDEALLDIYRKLRPGEPAAVDAAQMLLNNLYFTPKRYDLAK
+VGRYKLNRKLGVDVHLGDPNASVLTEDDIVQMVHFIAALHAGEKTVKGVRDGEAVDVRVE
+IDDIDHFGNRRIRAVGELIENQIRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
+IKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPI
+ETPEGPNIGLIGSLATFGRINSFGFIETPYRRVVDGRVTDTVDYLTADDELAYQIAQANA
+PVAEDGTFEEELVLCRQRGGDGEPVLSTVDEIDYMDVSPRQMVSAATALIPFLEHDDANR
+ALMGANMQRQAVPLLRSEAPYVGTGMEKYVAVDAGDSVTATAAGVVTEVAADLVTVMNDD
+GTTTHYPIMKFARSNQGNAYNQRVLVSEGDRVEPLSVIADGPATDNGELALGKNLLVAFM
+PWEGLNYEDAIILSQRMVSEDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEEVLSQL
+DERGIIHIGAEVEAGDILVGRVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGES
+GTVIGVRIFDRDEDDDLPPGVNQLVRVYVAQKRKITDGDKMAGRHGNKGVISKILPLEDM
+PFLADGTPVDIVLNPLGVPGRMNLGQVMELHLGWAASRGWDIQGEPEWIKDLPNFPRQSD
+PVNVATPVFDGAEAYEITGLLGHVNATRDGDRLMGENGKAQLFDGRTGEPFPDPVSVGYM
+YMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAFTLQEL
+LTIKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSADGQTIEMR
+DAEDEVYRAAEELGIDLSHAEPSSVEEV
+>1_1674
+MVASSTSNETATVSPRSGASAGRVSFAKISEPLDVPDLLALQTESFDRLIGNERWAARVD
+AALAADDHSVPVTSGLTDIFEEISPIEDFQGTMSLSFAEPEFADAKMTEEECKDRDATFS
+APLYVKAEFMNNTTGEIKQQTVFMGDFPLMTRNGTFIINGTERVVVSQLVRSPGAYFERT
+PDKTSDKEIFSAKIIPSRGAWFELEVDKRDQVGVRLDRKRKQPVTVLLKAMGWTESRILE
+EFGHYDSIRATLEKDGTADQDEALLDIYRKLRPGEPAAVDAAQTLLNNLYFTPKRYDLAK
+VGRYKLNRKLGVDVHLGDPNASVLTEDDIVQMVHFIAALHAGETVIKGTRDGEPVDVRVE
+IDDIDHFGNRRIRAVGELIENQIRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
+IKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPI
+ETPEGPNIGLIGSLATFGRINSFGFIETPYRRVVDGRVTDTVDYLTADDELAFQIAQANA
+PVDEDGRFEEEFVLCRQRGGDGEPVLSTVDEIDYMDVSPRQMVSAATALIPFLEHDDANR
+ALMGANMQRQAVPLLRSEAPYVGTGMEKYVAVDAGDSVTATQGGVVTEVAADLVTVMNDD
+GTTTHYPIMKFARSNQGNAYNQRVRVSEGERVEPLSIIADGPATDNGELALGKNLLVAFM
+PWEGLNYEDAIILSQRMVSEDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEEVLSQL
+DERGIIHIGAEVEAGDILVGRVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGES
+GTVIGVRIFDRDEDDDLPPGVNQLVRVYVAQKRKITDGDKMAGRHGNKGVISKILPLEDM
+PFLADGTPVDIVLNPLGVPGRMNLGQVMELHLGWAASRGWDIQGEPEWIKDLPNFPRQSG
+PVNVATPVFDGAEAYEITGLLGHVNVTRDGDRLMSDSGKAQLFDGRTGEPFPDPVSVGYM
+YMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAFTLQEL
+LTIKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSADGQAIEMR
+DAEDEVYRAAEELGIDLSHAEPSSVEEV
+>2_1055
+MVASSTSNETAAVSPRSAASAGRISFAKIHEPLDVPDLLALQTESFDRLIGNERWAARVD
+AAVAADDHSVSVTSGLTDIFEEISPIEDFQGTMSLSFSDPEFADAKMTEEECKDRDATFA
+APLYVKAEFMNNTTGEIKQQTVFMGDFPLMTRNGTFIINGTERVVVSQLVRSPGAYFERT
+PDKTSDKEIFSARIIPSRGAWFELEVDKRDQVGVRLDRKRKQPVTVLLKALGWTESRILE
+EFGQYDSIRATLEKDGTADQNEALLDIYRKLRPGEPAAVDAAQNLLNNLYFTAKRYDLAK
+VGRYKLNRKLGVDVHLGDPNASVLTEDDIVQMVHFIAALHAGEKTIKGARDGEPVEVRVE
+VDDIDHFGNRRIRAVGELIENQIRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
+IKEFFGTSQLSQFMDQNNPLAGLTHKRRLNALGPGGLSRDRAGMEVRDVHPSHYGRMCPI
+ETPEGPNIGLIGSLATFGRINPFGFIETPYRRVVDGRVTDQLDYLTADDELAFQIAQANA
+PVDEDGRFVEELVLCRQRGGGGEPVLSTVDDIDYMDVSPRQMVSAATALIPFLEHDDANR
+ALMGANMQRQAVPLLQSEAPYVGTGMEKYVAVDAGDSVTAAQPGVVTEVAADLVTVMNDD
+GSTTHYPIMKFSRSNQGNAYNQRVRVSEGDRVERLSIIADGPATDNGELALGKNLLVAFM
+PWEGLNYEDAIILSQRMVSDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEEVLSQL
+DERGIIHIGAEVEAGDILVGRVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGES
+GTVIGVRIFDRDEDDDLPPGVNQLVRVYVAQKRKITDGDKMAGRHGNKGVISKILPLEDM
+PFLADGTPVDVVLNPLGVPGRMNLGQVMEIHLGWAASRGWDIEGEPEWIKDLPDFPRQSG
+PVNVATPVFDGAEAYEITGLLGHVNKTRDGDRLMGTTGKAQLFDGRSGEPFPDPVSVGYM
+YMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAFTLQEL
+LTIKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSADGQTIEMR
+DAEDETYRAAEELGIDLSHAEPSSVEEV
+>3_1391
+MVASSTSNETATVSPRSGASAGRVSFAKISEPLDVPDLLALQTESFDRLIGNERWAARVD
+AALAADDHSVPVTSGLTDIFEEISPIEDFQGTMSLSFAEPEFADAKMTEEECKDRDATFS
+APLYVKAEFMNNTTGEIKQQTVFMGDFPLMTRNGTFIINGTERVVVSQLVRSPGAYFERT
+PDKTSDKEIFSAKIIPSRGAWFELEVDKRDQVGVRLDRKRKQPVTVLLKAMGWTESRILE
+EFGHYDSIRATLEKDGTADQDEALLDIYRKLRPGEPAAVDAAQTLLNNLYFTPKRYDLAK
+VGRYKLNRKLGVDVHLGDPNASVLTEDDIVQMVHFIAALHAGETVIKGTRDGEPVDVRVE
+IDDIDHFGNRRIRAVGELIENQIRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
+IKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPI
+ETPEGPNIGLIGSLATFGRINSFGFIETPYRRVVDGRVTDTVDYLTADDELAFQIAQANA
+PVDEDGRFEEEFVLCRQRGGDGEPVLSTVDEIDYMDVSPRQMVSAATALIPFLEHDDANR
+ALMGANMQRQAVPLLRSEAPYVGTGMEKYVAVDAGDSVTATQGGVVTEVAADLVTVMNDD
+GTTTHYPIMKFARSNQGNAYNQRVRVSEGERVEPLSIIADGPATDNGELALGKNLLVAFM
+PWEGLNYEDAIILSQRMVSEDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEEVLSQL
+DERGIIHIGAEVEAGDILVGRVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGES
+GTVIGVRIFDRDEDDDLPPGVNQLVRVYVAQKRKITDGDKMAGRHGNKGVISKILPLEDM
+PFLADGTPVDIVLNPLGVPGRMNLGQVMELHLGWAASRGWDIQGEPEWIKDLPNFPRQSG
+PVNVATPVFDGAEAYEITGLLGHVNVTRDGDRLMSDSGKAQLFDGRTGEPFPDPVSVGYM
+YMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAFTLQEL
+LTIKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSADGQAIEMR
+DAEDEVYRAAEELGIDLSHAEPSSVEEV
+>4_1603
+MVASSTSNETATVSPRSGASAGRVSFAKISEPLDVPDLLALQTESFDRLIGNERWAARVD
+AALAADDHSVPVTSGLTDIFEEISPIEDFQGTMSLSFAEPEFADAKMTEEECKDRDATFS
+APLYVKAEFMNNTTGEIKQQTVFMGDFPLMTRNGTFIINGTERVVVSQLVRSPGAYFERT
+PDKTSDKEIFSAKIIPSRGAWFELEVDKRDQVGVRLDRKRKQPVTVLLKAMGWTESRILE
+EFGHYDSIRATLEKDGTADQDEALLDIYRKLRPGEPAAVDAAQTLLNNLYFTPKRYDLAK
+VGRYKLNRKLGVDVHLGDPNASVLTEDDIVQMVHFIAALHAGETVIKGTRDGEPVDVRVE
+IDDIDHFGNRRIRAVGELIENQIRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
+IKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPI
+ETPEGPNIGLIGSLATFGRINSFGFIETPYRRVVDGRVTDTVDYLTADDELAFQIAQANA
+PVDEDGRFEEEFVLCRQRGGDGEPVLSTVDEIDYMDVSPRQMVSAATALIPFLEHDDANR
+ALMGANMQRQAVPLLRSEAPYVGTGMEKYVAVDAGDSVTATQGGVVTEVAADLVTVMNDD
+GTTTHYPIMKFARSNQGNAYNQRVRVSEGERVEPLSIIADGPATDNGELALGKNLLVAFM
+PWEGLNYEDAIILSQRMVSEDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEEVLSQL
+DERGIIHIGAEVEAGDILVGRVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGES
+GTVIGVRIFDRDEDDDLPPGVNQLVRVYVAQKRKITDGDKMAGRHGNKGVISKILPLEDM
+PFLADGTPVDIVLNPLGVPGRMNLGQVMELHLGWAASRGWDIQGEPEWIKDLPNFPRQSG
+PVNVATPVFDGAEAYEITGLLGHVNVTRDGDRLMSDSGKAQLFDGRTGEPFPDPVSVGYM
+YMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAFTLQEL
+LTIKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLSADGQAIEMR
+DAEDEVYRAAEELGIDLSHAEPSSVEEV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000766.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000766.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f37ebf23624122063a0048e10f7c9b4bf9ca1aa1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000766.fa
@@ -0,0 +1,20 @@
+>0_1128
+MPRKGPAPKRPLVVDPVYGSPLVTQLINKVLIDGKKSTAERIVYGALEGARAKNGADPVA
+TLKKAMDNIKPALEVRSRRVGGATYQVPVEVKPGRSTALALRWLVGFSKARREKTMTERL
+MNEILDASNGLGGAVKRREDTHKMAEANKAFAHYRW
+>1_1671
+MPRKGPAPKRPLVVDPVYGSPLVTQLINKVLVDGKKSTAERIVYGALEGARAKNGADPVA
+TLKKAMDNIKPALEVRSRRVGGATYQVPVEVKPGRSTALALRWLVGFSKARREKTMTERL
+MNEILDASNGLGGAVKRREDTHKMAEANKAFAHYRW
+>2_1059
+MPRKGPAPKRPLVVDPVYGSPLVTQLINKVLIDGKKSTAERIVYGALEGVRAKNGADPVA
+TLKKAMDNIKPALEVRSRRVGGATYQVPVEVKPGRSTALALRWLVGFSKARREKTMTERL
+MNEILDASNGLGGAVKRREDTHKMAEANKAFAHYRW
+>3_1388
+MPRKGPAPKRPLVVDPVYGSPLVTQLINKVLVDGKKSTAERIVYGALEGARAKNGADPVA
+TLKKAMDNIKPALEVRSRRVGGATYQVPVEVKPGRSTALALRWLVGFSKARREKTMTERL
+MNEILDASNGLGGAVKRREDTHKMAEANKAFAHYRW
+>4_1600
+MPRKGPAPKRPLVVDPVYGSPLVTQLINKVLVDGKKSTAERIVYGALEGARAKNGADPVA
+TLKKAMDNIKPALEVRSRRVGGATYQVPVEVKPGRSTALALRWLVGFSKARREKTMTERL
+MNEILDASNGLGGAVKRREDTHKMAEANKAFAHYRW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000772.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000772.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c4b6255165019335c811703205bd97489b74f328
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000772.fa
@@ -0,0 +1,25 @@
+>0_1134
+MTNTQNIKGLLGTKLGMTQVWDENNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQ
+IDPRRVTKPLAGHFDKAGVTPRRHLVELRTADAAEYSLGQDLTVEVFEAGQKVDVVGTTK
+GKGFAGAMKRHGFAGVSASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMN
+LTLHGVDVENNLLLIKGAVPGSKGQVVLVRSAVKGA
+>1_1665
+MTNTQNIKGLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQ
+IDPRRVTKPLAGHFEKAGVTPRRHLVELRTADAAEYSLGQDVTVEVFEAGQKVDVVGTTK
+GKGFAGAMKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMN
+LTLHGIDVENNLLLIKGAVPGSKGQVVLVRSAVKGA
+>2_1065
+MTNTQNVKGLMGTKLGMTQVWDEDNKLIPVTVVQADANVVTQLRSEETDGYTAVQIAYGQ
+IDPRRVTKPLAGHFEKAGVTPRRHLVELRTADAAEYTLGQDVTVEVFEAGQKVDVVGTTK
+GKGFAGAMKRHGFAGVSASHGAHKNHRKPGSVGGASTPARVFKGQRMPGRMGAVRQTTMN
+LTLHGIDVENNLLLIKGAVPGSKGQVVLVRSAVKGA
+>3_1382
+MTNTQNIKGLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQ
+IDPRRVTKPLAGHFEKAGVTPRRHLVELRTADAAEYSLGQDVTVEVFEAGQKVDVVGTTK
+GKGFAGAMKRHGFAGVGASHGQHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMN
+LTLHGIDVENNLLLIKGAVPGSKGQVVLVRSAVKGA
+>4_1594
+MTNTQNIKGLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQ
+IDPRRVTKPLAGHFEKAGVTPRRHLVELRTADAAEYSLGQDVTVEVFEAGQKVDVVGTTK
+GKGFAGAMKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMN
+LTLHGIDVENNLLLIKGAVPGSKGQVVLVRSAVKGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000773.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000773.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2bc48e2498b3e08648c5be2d93e57f132c54de6a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000773.fa
@@ -0,0 +1,25 @@
+>0_1135
+MAENSVKTVQVDLPAEIFDVQSNVPLMHQVVVAQLAAARQGTHKVKRRGEVSGAGRKPFK
+QKGTGRARQGSIRAPHMTGGGIVHGPTPRDYSQRTPKKMKAAALRGALSDRARNGRVHVI
+EALVSGTTPSTKAAKAGLASLNTGRKNVLLVIDRADDVAALSARNLPAVHTLYADQLNTY
+DVLVSDDVVFTQAAYEAYVAQASGAKKEDAQ
+>1_1664
+MAENSVKTVQVDLPAELFDVQSNVPLMHQVVVAQLAAARQGTHKTKRRGEVSGAGRKPFK
+QKGTGRARQGSIRAPHMTGGGVVHGPTPRDYSQRTPKKMKAAALRGALSDRARNGRVHVI
+EALVSGTTPSTKAAKAGLASLNTGRKNVLLVIDRADDVAALSARNLPAVHTLYADQLNTY
+DVLVSDDVVFTQAAYEAYVAQASGAKKEDAQ
+>2_1066
+MAENTVKTVQVELPAEIFDVQANVPLMHQVVVAQLAAARQGTHKVKRRGEVSGAGRKPFK
+QKGTGRARQGSIRAPHMTGGGIVHGPTPRDYSQRTPKKMKAAALRGALSDRARNGRVHVI
+EALVSGTTPSTKAAKAGLESLNTGRKNVLLVIDRADDLTALSARNLPAVHTLYADQLNTY
+DVLVSDDVVFTKVAYEAYVAQASGAKKEDAQ
+>3_1381
+MAENSVKTVQVDLPAELFDVQSNVPLMHQVVVAQLAAARQGTHKTKRRGEVSGAGRKPFK
+QKGTGRARQGSIRAPHMTGGGVVHGPTPRDYSQRTPKKMKAAALRGALSDRARNGRVHVI
+EALVSGTTPSTKAAKAGLASLNTGRKNVLLVIDRADDVAALSARNLPAVHTLYADQLNTY
+DVLVSDDVVFTQAAYEAYVAQASGAKKEDAQ
+>4_1593
+MAENSVKTVQVDLPAELFDVQSNVPLMHQVVVAQLAAARQGTHKTKRRGEVSGAGRKPFK
+QKGTGRARQGSIRAPHMTGGGVVHGPTPRDYSQRTPKKMKAAALRGALSDRARNGRVHVI
+EALVSGTTPSTKAAKAGLASLNTGRKNVLLVIDRADDVAALSARNLPAVHTLYADQLNTY
+DVLVSDDVVFTQAAYEAYVAQASGAKKEDAQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000774.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000774.fa
new file mode 100644
index 0000000000000000000000000000000000000000..118a1e6ff8c3f7238e40ddbd405f4f3ce69aa0fd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000774.fa
@@ -0,0 +1,15 @@
+>0_1136
+MSGSINKDPRDVIIAPVVSEKSYGLIDEGKYTFLVDPRSNKSEIKQAVERIFNVDVASVN
+TLNRSGKRRRTRFGWGQRKSTKRAIVTLKDGTIDIFGGPLA
+>1_1663
+MSGSINKDPRDVIIAPVVSEKSYGLIDEGKYTFLVDPRSNKSEIKQAVERIFNVDVASVN
+TLNRSGKRRRTRFGWGQRKSTKRAIVTLKDGTIDIFGGPLA
+>2_1067
+MSGSINKDPRDVIIAPVVSEKSYGLIDEGKYTFLVDPRSNKTEIKQAIERIFDVSVASVN
+TLNRPGKRRRTRFGWGQRKSTKRAIVSLKDGATIDIFGGPLAS
+>3_1380
+MSGSINKDPRDVIIAPVVSEKSYGLIDEGKYTFLVDPRSNKSEIKQAVERIFNVDVASVN
+TLNRSGKRRRTRFGWGQRKSTKRAIVTLKDGTIDIFGGPLA
+>4_1592
+MSGSINKDPRDVIIAPVVSEKSYGLIDEGKYTFLVDPRSNKSEIKQAVERIFNVDVASVN
+TLNRSGKRRRTRFGWGQRKSTKRAIVTLKDGTIDIFGGPLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000776.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000776.fa
new file mode 100644
index 0000000000000000000000000000000000000000..064263bebe8ebe5db8f7cbcdcc82289f3c1b480c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000776.fa
@@ -0,0 +1,15 @@
+>0_1138
+MPRSLKKGPFVDQHLYLKVLAENEKGSKNVIKTWSRRSMIIPDMLGHTIAVHDGRKHVPV
+FVTESMVGHKLGEFAPTRTYRGHVKDDKKGKRR
+>1_1661
+MPRSLKKGPFVDQHLYLKVLAENEKGSKNVIKTWSRRSMIIPDMLGHTIAVHDGRKHVPV
+FVTESMVGHKLGEFAPTRTYRGHVKDDKKGKRR
+>2_1069
+MPRSLKKGPFVDQHLYLKVLAENEKGSKNVIKTWSRRSMIIPDMLGHTIAVHDGRKHVPV
+FVTESMVGHKLGEFAPTRTFRGHVKDDKKGKRR
+>3_1378
+MPRSLKKGPFVDQHLYLKVLAENEKGSKNVIKTWSRRSMIIPDMLGHTIAVHDGRKHVPV
+FVTESMVGHKLGEFAPTRTYRGHVKDDKKGKRR
+>4_1590
+MPRSLKKGPFVDQHLYLKVLAENEKGSKNVIKTWSRRSMIIPDMLGHTIAVHDGRKHVPV
+FVTESMVGHKLGEFAPTRTYRGHVKDDKKGKRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000778.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000778.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d72eb9010d1a23caa1668293238e0c4e554e32eb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000778.fa
@@ -0,0 +1,30 @@
+>0_1140
+MGQKINPNGFRLGITTDHVSHWFADSHKEGQRYADFLKEDVKIRELMTTGMERAGISKVE
+IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVKNPETDAQLV
+AQGVAEQLASRVAFRRAMKKAIQSAMRAGAQGIRIQCAGRLGGAEMSRSEFYREGRVPLH
+TLRANIDFGKFEAKTTFGRIGVKVWIYKGDLTAKELAAKEAAQPSGRGRGGDRRGGGGGE
+RRRRNDRAERAPRQENAGAGAETPAAAPAEGGNA
+>1_1659
+MGQKINPNGFRLGITTDHVSHWFADSHKEGQRYADFLKEDVKIRELMTTGMERAGISKVE
+IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVKNPETDAQLV
+AQGVAEQLASRVAFRRAMKKAIQSAMRAGAQGIRIQCSGRLGGAEMSRSEFYREGRVPLH
+TLRANIDFGKFEAKTTFGRIGVKVWIYKGDLTAKELAAKEAAQPSGRGRGGVRRSGGERR
+RRNDRAERAPRQENAGAGAETPAAAPAEGGNA
+>2_1071
+MGQKINPNGFRLGITTDHVSHWFADSHKEGQRYADFLKEDVKIRELMTDGMERAGISKVE
+IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVKNPETDAQLV
+AQGVAEQLASRVAFRRAMKKAIQSAMRAGAQGIRIQCSGRLGGAEMSRSEFYREGRVPLH
+TLRANIDFGKFEAKTTYGRIGVKVWIYKGDLTAKELAAKEAAQPSGRGRGGERRGPGGGE
+RRRRNDRAERAPRQENAGAGAEQSAAAPAEGGNA
+>3_1376
+MGQKINPNGFRLGITTDHVSHWFADSHKEGQRYADFLKEDVKIRELMTTGMERAGISKVE
+IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVKNPETDAQLV
+AQGVAEQLASRVAFRRAMKKAIQSAMRAGAQGIRIQCSGRLGGAEMSRSEFYREGRVPLH
+TLRANIDFGKFEAKTTFGRIGVKVWIYKGDLTAKELAAKEAAQPSGRGRGGERRGGGERR
+RRNDRAERAPRQENAGAGAETPAAAPAEGGNA
+>4_1588
+MGQKINPNGFRLGITTDHVSHWFADSHKEGQRYADFLKEDVKIRELMTTGMERAGISKVE
+IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVKNPETDAQLV
+AQGVAEQLASRVAFRRAMKKAIQSAMRAGAQGIRIQCSGRLGGAEMSRSEFYREGRVPLH
+TLRANIDFGKFEAKTTFGRIGVKVWIYKGDLTAKELAAKEAAQPSGRGRGGERRGGGERR
+RRNDRAERAPRQENAGAGAETPAAAPAEGGNA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000780.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000780.fa
new file mode 100644
index 0000000000000000000000000000000000000000..97fac45fe8edcd9ebcf7ca4b2a6a421bf3bb123a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000780.fa
@@ -0,0 +1,15 @@
+>0_1142
+MAIGTKDLNVESLDGMDNARLLEALKSSKEELFNLRFQAATGQLDNSSRLKAVKRDIARI
+YTILRERELGIRGDVAAEAQADNNEEAAK
+>1_1657
+MAIGTKDLNVESLDGMDNARLLEALKSSKEELFNLRFQAATGQLDNASRLKAVKRDIARI
+YTILRERELGIRGDVAAEAQAEKNEEAAK
+>2_1073
+MAIGTKDLNVESLDGMDNARLLEALKSSKEELFNLRFQAATGQLEDSSRLKAVKRDIARI
+YTILRERELGIRGDVETAGAEKNEEAAK
+>3_1374
+MAIGTKDLNVESLDGMDNARLLEALKSSKEELFNLRFQAATGQLDNASRLKAVKRDIARI
+YTILRERELGIRGDVAAEAQAEKNEEAAK
+>4_1586
+MAIGTKDLNVESLDGMDNARLLEALKSSKEELFNLRFQAATGQLDNASRLKAVKRDIARI
+YTILRERELGIRGDVAAEAQAEKNEEAAK
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000783.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000783.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6724423857990a8e017315e9f7086c9e160e5247
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000783.fa
@@ -0,0 +1,15 @@
+>0_1145
+MAKIKKDDLVQVISGKDKGKQGKVLRVFPADERVLVEGVNRVTKHLRAGQDNNGSTEGGR
+QVAEAPIHISNVAVVDPETKKPTRVGYRFETVEKNGESKTVKVRFAKASGKEL
+>1_1654
+MAKIKKDDLVQVISGKDKGKQGKVLRVFPADERVLVEGVNRVTKHLRAGQDNNGSTEGGL
+QVVEAPIHISNVAVVDPETKKPTRVGYRFETVEKDGVSKTVKVRFAKASGKEL
+>2_1076
+MAKIKKDDLVQVLSGKDKGKQGKVLRVFPADERVLVEGVNRVTKHLRAGQNNNGSTEGGL
+QVVEAPIHISNVAVVDPETKKPTRVGYRFETVEKNGEQVTVKVRFAKASGKEL
+>3_1371
+MAKIKKDDLVQVISGKDKGKQGKVLRVFPADERVLVEGVNRVTKHLRAGQDNNGSTEGGL
+QVVEAPIHISNVAVVDPETKKPTRVGYRFETVEKDGVSKTVKVRFAKASGKEL
+>4_1583
+MAKIKKDDLVQVISGKDKGKQGKVLRVFPADERVLVEGVNRVTKHLRAGQDNNGSTEGGL
+QVVEAPIHISNVAVVDPETKKPTRVGYRFETVEKDGVSKTVKVRFAKASGKEL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000787.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000787.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5f1dfbd7c05cfa6d6ee212beab5cba9ab3325765
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000787.fa
@@ -0,0 +1,20 @@
+>0_1149
+MSTLKVKGKGKFNARTRRHLRVRKRISGTTVRPRLVVNRSARHMFVQVVDDTQSRTLAWA
+STMEADVRALEGDKTAKAKRVGELVAERAKAAGIEAVVFDRGGNKYHGRVAAVADGAREG
+GLKL
+>1_1650
+MSTLKVKGKGKFNARTRRHLRVRKRISGTTVRPRLVVNRSARHMFVQVVDDTQSRTLAYA
+STMEADVRALEGDKTAKAKRVGELVAERAKAAGIDAVVFDRGGNKYHGRVAAVADGAREG
+GLQL
+>2_1080
+MSTLKVKGKGKFNARTRRHLRVRKRISGTAVRPRLVVNRSARHMFVQVVDDTQSRTLAYA
+STMEADVRAFDGDKTAKAKRVGELVAERAKAAGIEAVVFDRGGNKYHGRVAAVADGAREG
+GLQL
+>3_1367
+MSTLKVKGKGKFNARTRRHLRVRKRISGTTVRPRLVVNRSARHMFVQVVDDTQSRTLAYA
+STMEADVRALEGDKTAKAKRVGELVAERAKAAGIEAVVFDRGGNKYHGRVAAVADGAREG
+GLQL
+>4_1579
+MSTLKVKGKGKFNARTRRHLRVRKRISGTTVRPRLVVNRSARHMFVQVVDDTQSRTLAYA
+STMEADVRALEGDKTAKAKRVGELVAERAKAAGIEAVVFDRGGNKYHGRVAAVADGAREG
+GLQL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000790.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000790.fa
new file mode 100644
index 0000000000000000000000000000000000000000..78e059fc47452db02e8ad7b8e9e7768a1bdec29e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000790.fa
@@ -0,0 +1,20 @@
+>0_1152
+MADNDAIKVHDLRPAPGAKTAKTRVGRGEASKGKTAGRGTKGTKARYQVRAGFEGGQLPL
+QMRLPKLRGFKNPFRTEYQVVNLDKLSAHFPEGGEVTVDALVSKGLVRRGQPVKVLGTGE
+ITSAVQVKVDAFSASAVEKIQAAGGSTETL
+>1_1647
+MADNDAIKVHDLRPAPGAKTAKTRVGRGEASKGKTAGRGTKGTKARYQVRAGFEGGQLPL
+QMRLPKLRGFKNPFRTEYQVVNLDKLSAHFPEGGEVTVDALVSKGLVRRGQPVKVLGTGE
+ITSAVQVKANAFSSSAVEKIQAAGGSTETL
+>2_1083
+MAENDAIKVHDLRPAPGAKTAKTRVGRGEGSKGKTAGRGTKGTKARYQVRAGFEGGQLPL
+QMRLPKLRGFKNPFRTEYQVVNLDKLSEMFPEGGEVTVETLVSKGLVRKNQPVKVLGTGE
+ITSAVQMKADAFSASAIEKIKAAGGSAETV
+>3_1364
+MADNDAIKVHDLRPAPGAKTAKTRVGRGEASKGKTAGRGTKGTKARYQVRAGFEGGQLPL
+QMRLPKLRGFKNPFRTEYQVVNLDKLSAHFPEGGEVTVDALVSKGLVRRGQPVKVLGTGE
+ITSAVQVKANAFSSSAVEKIQAAGGSTETL
+>4_1576
+MADNDAIKVHDLRPAPGAKTAKTRVGRGEASKGKTAGRGTKGTKARYQVRAGFEGGQLPL
+QMRLPKLRGFKNPFRTEYQVVNLDKLSAHFPEGGEVTVDALVSKGLVRRGQPVKVLGTGE
+ITSAVQVKANAFSSSAVEKIQAAGGSTETL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000795.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000795.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f5944d16ee31bade6efee6410664e904ee2606bb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000795.fa
@@ -0,0 +1,10 @@
+>0_1157
+MKVQPSVKRICDKCQVVRRKGRVLVICSNPRHKQRQG
+>1_1642
+MKVQPSVKRICDKCQVVRRKGRVLVICSNPRHKQRQG
+>2_1088
+MKVQPSVKRICDKCQVVRRKGRVLVICENPRHKQRQG
+>3_1359
+MKVQPSVKRICDKCQVVRRKGRVLVICSNPRHKQRQG
+>4_1571
+MKVQPSVKRICDKCQVVRRKGRVLVICSNPRHKQRQG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000802.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000802.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2ecf88dd428f77cb3c92a735719b24e8edb60887
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000802.fa
@@ -0,0 +1,20 @@
+>0_1164
+MSINEHDDVELTSYTSESTSAGTEAPAASERPALTVPGSAVGRRKEAVARVRLVPGSGQW
+TINGRTLENYFPNKLHQQEVNDPFTLLELAGAYDVIARIHGGGPSGQAGALRLGISRALN
+EIDREHNRPALKKAGFLTRDARVIERKKAGLKKARKASQFSKR
+>1_1635
+MSINENDDVELTSYTSESTATAEAPAASERPALTVPGSAVGRRKEAVARVRLVPGSGQWT
+INGRALENYFPNKLHQQEVSDPFTLLELTGAYDVIARIHGGGPSGQAGALRLGISRALNE
+IDREHNRPALKKAGFLTRDARVIERKKAGLKKARKASQFSKR
+>2_1095
+MSINQNDDVELTSYTSESTAASETAAVSERPALTVPGSAVGRRKEAVARVRLVPGSGQWS
+VNGRTLENYFPNKLHQQEVNDPFTLLELNGAYDVIARIHGGGPSGQAGALRLGISRALNE
+IDREHNRPALKKAGFLTRDARVIERKKAGLKKARKASQFSKR
+>3_1352
+MSINENDDVELTSYTSESTAAAEAPVASERPALTVPGSAVGRRKEAVARVRLVPGSGQWT
+INGRALENYFPNKLHQQEVSDPFTLLELTGAYDVIARIHGGGPSGQAGALRLGISRALNE
+IDREHNRPALKKAGFLTRDARVIERKKAGLKKARKASQFSKR
+>4_1564
+MSINENDDVELTSYTSESTATAEAPAASERPALTVPGSAVGRRKEAVARVRLVPGSGQWT
+INGRALENYFPNKLHQQEVSDPFTLLELTGAYDVIARIHGGGPSGQAGALRLGISRALNE
+IDREHNRPALKKAGFLTRDARVIERKKAGLKKARKASQFSKR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000812.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000812.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f88268eb0a2388ef11dfeb5fc8ca866d9bc2f04b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000812.fa
@@ -0,0 +1,50 @@
+>0_1178
+MSVEELRRVAVAGSAVRAAEAPLLAAGRGPAMMRDAAWALAEHAAALLRARGPVAGTTVA
+ALVGPGNNGGDALFALAFLRRRGVAAVAVPVRHDDDGAPRWHAEGWAALRAAGGRRADAV
+PAAAALVIDGMLGTGFAGELTLPPAARALPRDAVVLACDVPSGVDADTGEVRGEALRADA
+TVTFGALKTGLLVGEGAALAGEVHPVDIGLGPQLPTSPAARLYLADEAAVRAAHPAPAPD
+AHKYTRGLVAVAAGSPRYPGAAVLSCSGALHAGAGMVHHAGPEATRDRVLAEHPEALVSA
+EGPAPDRADAWVAGPGLDTQDDARRRWEGVLSALAERPEAALVADASALELVTAAQLRAL
+REGGTPVVLTPHAGEWARLRERLPADGADAADPLAALRSWSAAHGATVLLKGPRTLTVQP
+DGEAWLVADGGPELAMGGTGDVLAGALGAVLAADVARRSRARRAEQAPGPVPTAALAAAA
+AWLHARAGAEQARAGRLTTRTLPAALGAVTARLWRAGDENGRTRG
+>1_1621
+MTADDLTRIAVTGSAVRTAEEPLLAAGRGPELMRAAAWALAEHAAALLRERGPVAGTTVA
+ALVGPGNNGGDALFALAFLRRRGVAAVAVPVRRDDDGAPRWHAEGWAALRAAGGRRADAV
+PPEAALVVDGVLGTGFTGEYELPAAARALPAEALVLACDVPSGVDADTGEVRGEALRAAA
+TVTFGALKSGLVLGEGAGRAGTVHVADIGLGPHLPTSPAARLGVMDEAAARAAHPAPAAA
+AHKYTRGVVAVVAGSERYPGAAVLASAGALHTGAGMVHHAGPQTTRDLVLAAHPEALVSA
+EGPEPSRADAWVAGPGLDTEHDARRRWAGVLAALEERPEAALLADASALDLVTAAELRSL
+RAAGTPVVLTPHAGEWSRLRERVPADGADAADPLAALRAWTAEHGATVLLKGPRTLVVAP
+DGEAWAVTGGGPDLAMGGTGDVLSGAIGAVLAADVARRSRARRAGEDPGPAPTARLAAAA
+AWLHAQAGAEQARAGRITTATLPAALGARVARLWWPDDAEPEAVR
+>2_1107
+MRAHTGTDVRAAERPLLDEGRGEALMRTAAWGLAEHVAAELRARGPVAGATVAALVGPGN
+NGGDALWALAFLRRRGVEAVAVPVRRNEAGEPVWHAAGWAALQAAGGRRSTAVPARAAVV
+VDAMLGTGARGGFTLPEPARHLPSGAAVVACDLPSGVDADTGAVPGEALAADLTVTFGAS
+KTGLLLGAGPGRAGRVVCVDIGLGPHLPADPAAGLHVVDDDAVARLHPVPARDAHKYTRG
+VVGVVAGSERYPGAAVLAVGGVLAGGAGMAHHGGPARAGDLVLAAHPAALTSADGPAPER
+ADAWVLGPGLGDGDGARERVRATVAAVLASGADGDRGPAALVVDASALDLVTGEDLAALA
+AVDARTVITPHAGEWARLRDRLPVPAADAVDVDEDGAGELARLRAWTAARGVTVLLKGPA
+SLAVAPDGQAWLMRDGGPQLGVAGTGDVLAGALGAVLAAETARARRGGDERHGAARGGRP
+SPAALAAAAAWLHARAGVRQAADGRATADTLPAALGDVVARRWWENDAHGRRP
+>3_1336
+MTADDLTRIAVTGSAVRTAEEPLLTAGRGPELMRAAAWALAEHAAALLRERGPVAGATVA
+ALVGPGNNGGDALFALAFLRGRGVAAVAVPVRRDDDGAPRWHAEGWAALRAAGGRRADAV
+PPEAALVVDGVLGTGFTGEYELPAAARALPAEALVLACDVPSGVDADTGEVRGEALRADT
+TVTFGALKSGLVLGEGAARAGTVHVVDIGLGPHLPTSPAARLGVMDEAAARTAHPAPAAE
+AHKYTRGVVAVVAGSERYPGAAVLASAGALHTGAGMVHHAGPQTTRDLVLAAHPEALVSA
+EGPEPSRADAWVAGPGLDTEHDARRRWAGVLAALEERPEAALVADASALDLVTAAELRSL
+RAAGTPVVLTPHAGEWSRLRERVPADGADAADPLAALRAWTSEHGATVLFKGPRTLVVAP
+DGEAWVVTGGGPDLAMGGTGDVLSGAIGAVLAADVARRSRARRAGEDPGPAPTARLAAAA
+AWLHARAGADQARAGRITTATLPTALGARVAHLWWPDDAEPEAVR
+>4_1551
+MTADDLTRIAVTGSAVRTAEEPLLAAGRGPELMRAAAWALAEHAAALLRERGPVAGATVA
+ALVGPGNNGGDALFALAFLRRRGVAAVAVPVRRDDDGAPRWHAEGWAALQAAGGRRADAV
+PPEAALVVDGVLGTGFTGEYELPAAARALPAEALVLACDVPSGVDADTGEVRGEALRADA
+TVTFGALKSGLVLGEGAARAGTVHVVDIGLGPHLPTSPAARLGVMDEAAARTAHPAPAAE
+AHKYTRGVVAVVAGSERYPGAAVLASAGALQTGAGMVHHAGPQTTRDLVLAAHPEALVSA
+EGPEPSRADAWVAGPGLDTEHDARRRWAGVLAALEERPEAALVADASALDLVTAAELRSL
+RAAGTPVVLTPHAGEWSRLRERVPADGADATDPLAALRAWTAAHGATVLLKGPRTLVVAP
+DGEAWVVTGGGPDLAMGGTGDVLSGAIGAVLAADVARRSRARRAGEDPGPAPTARLAAAA
+AWLHAQAGADQARAGRITTATLPTALGARVARLWWPDDAEPESVR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000817.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000817.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f9479956a987bcb1d7ee852075eb0c47420a1f6c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000817.fa
@@ -0,0 +1,40 @@
+>0_1183
+MTGPLTRLEPMPTATAAPLVLGIESSCDETGVGVVRGTALLAHEVASSVEEHVRFGGVIP
+EIAARAHLEALVPTVRRALEAADVGLKDLDAIAVTSGPGLAGALMVGVAGAKALATALDT
+PLYGINHLVAHVGVGMLDGVRPAQWDDLPADLGALLVSGGHTEILRVGRISSEVELLGST
+IDDAAGEAYDKVARLIGAGYPGGPVIDRLAAQGDPTAFRFPRGLTAGKFVGSAEEPGPHR
+HDWSFSGLKTAVSRAVEQFEARGLEVPRADIAASFQEAVADVITAKAVRACREHGLTHLM
+LGGGVAANSRLRALLADRCRSAGIELTVPPVNLCTDNGAMVAALGARLVRDGVAPSDAWF
+GADPGQPVEVVSV
+>1_1616
+MTGPLTRLEPMPTATAAPLVLGIESSCDETGVGVVRGTALLAHEVASSVEEHVRFGGVIP
+EIAARAHLEALVPTIRRALDTADVTLADLDAIAVTSGPGLAGALMVGVAGAKALATALGT
+PLYGINHLVAHVGVGMLDGVRPAQWDDLPADLGALLVSGGHTEILRVGRISAEVELLGST
+IDDAAGEAYDKVARLIGAGYPGGPVIDRLAAQGDPTAFRFPRGLTAGKFVGSAEEPGPHR
+HDWSFSGLKTAVSRAVEQFEARGLEVPRADIAASFQEAVADVITAKAVRACREHGLTHLM
+LGGGVAANSRLRALLADRCRSAGIELTVPPVNLCTDNGAMVAALGARLVRDGVAPSDAWF
+GADPGQPVEVVSV
+>2_1112
+MAPMSATATAPLVLGIESSCDETGVGIARGTALLAHEVASSVEEHVRFGGVIPEIAARAH
+LEALVPTVRRALDAAGVTLDEVDAIAVTSGPGLAGALMVGVAGAKALAVAADKPLYGINH
+LVAHVGVGLLDGVRPADWDDLPRDLGALLVSGGHTEILQVDRISSDVTLLGSTIDDAAGE
+AYDKVARLIGAGYPGGPVIDRMAQEGDPKAFRFPRGLTAGKFVGTAEEPGPHRHDWSFSG
+LKTAVSRAVEQFEAQGLEVPRTDIAASFQEAVADVITAKAVRACREHGLTHLLLGGGVAA
+NSRLRGLLADRCRSAGIELVVPPVNLCTDNGAMVAALGARLVADGVAPSDLAFGADPGQP
+VSAVSAA
+>3_1331
+MPTATAAPLVLGIESSCDETGVGVVRGTALLAHEVASSVEEHVRFGGVIPEIAARAHLEA
+LVPTIRRALDTADVTLADLDAIAVTSGPGLAGALMVGVAGAKALATALGTPLYGINHLVA
+HVGVGMLDGVRPAQWDDLPADLGALLVSGGHTEILRVGRISSEVELLGSTIDDAAGEAYD
+KVARLIGAGYPGGPVIDRLAAEGDPTAFRFPRGLTAGKFVGSAEEPGPHRHDWSFSGLKT
+AVSRAVEQFEARGLEVPRADIAASFQEAVADVITAKAVRACREHGLTHLMLGGGVAANSR
+LRALLADRCRSAGIELTVPPVNLCTDNGAMVAALGARLVRDGVAPSDAWFGADPGQPVEV
+VSV
+>4_1546
+MTGLLTRLEPMPTATAAPLVLGIESSCDETGVGVVRGTALLAHEVASSVEEHVRFGGVIP
+EIAARAHLEALVPTIRRALDTADVTLADLDAIAVTSGPGLAGALMVGVAGAKALATALGT
+PLYGINHLVAHVGVGMLDGVRPAQWDDLPADLGALLVSGGHTEILRVGRISSEVELLGST
+IDDAAGEAYDKVARLIGAGYPGGPVIDRLAAQGDPTAFRFPRGLTAGKFVGSAEEPGPQR
+HDWSFSGLKTAVSRAVEQFEARGLEVPRADIAASFQEAVADVITAKAVRACREHGLTHLM
+LGGGVAANSRLRALLADRCRSAGIELTVPPVNLCTDNGAMVAALGARLVRDGVAPSDAWF
+GADPGQPVEVVSV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000819.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000819.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b358789bc89d9c3a48112a113153210b499dc542
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000819.fa
@@ -0,0 +1,35 @@
+>0_1201
+MTHHASTTHRSPGGRRFGATELPPEIERALRRAVRLEWATLAVLAVTIALVAVVMGSSQA
+MRAAWIEDLLSLVPPIAFLVAVRVTRRHPTRARPYGSHRSVGVGHLVAAVALSVMGVILV
+ADSALGLVTGEHPPIGTLDLFGHTVWQGWFMMAVMALSIPGPVLLGRAKLKLAEQLHDRV
+LYADADMNKADWQTGVATIVGVAGIGLGWWWADSAAAIFVGVSIVLDGWRNLREAVGNLA
+DRRATTIDGDRPHPLIDRAERVAWAQPWVRHAGTRVRDEGHVLHVEMFVVPHEGAGATVG
+RCAQLREEIVALDWKLEDVVVVPVAELPAEVHGGASGDEQSGEE
+>1_1614
+MTRRDTRETGPSGRRFGATELPPEIERVVQQAKRLEWATLGVIVVTIVLVAFVMGSSQAM
+RAAWIEDLLSLIPPIAFLVALRVARMAPTRARPYGSHRSVGVGHLVAAVALSVMGVVLVG
+DSLLGLVTAEHPPIGTFDLFGHTVWQGWFMMAVMALSVPGPMILGHKKLKLAEQLHDRVL
+YADADMNKADWQTGVATIVGVAGIGLGWWWADSAAAILVGVSIVLDGWKNLKEAVTNLAD
+RRAATIDGARPHPLIDRAERVAWAEPWVRHAGARVRDEGHVFHVEMFVVPHEGADVTVAR
+CCALRDAIAALDWKLQDVVVAPVDELPAEVHGGRSGEHQTGEE
+>2_1113
+MSEKRTIGRAELPDDVARAAHQAVVLEWVSLGWLVLTVSLVAVVMGSSQAMRAAWIEDLL
+SLIPPIAFLVALRVARMAPTRARPYGSHRSVGVGHLVAAVALSVMGVVLVGDSLLGLLTA
+EHPPIGTFDLFGHTVWQGWFMMAVMALSVPGPMILGHKKLKLAEQLHDRVLYADADMNKA
+DWQTGVATIVGVAGIGLGWWWADAAAAIFVGVSIVLDGWKNLKEAVTNLADRRATTIDGA
+RPHPIIDRAERVAWAQPWVRHAGARVRDEGHVFHLEMFVVPRHGADVTVGRCADLRERIE
+ELDWKLEDVVVVPVAELPEEVHGGRSGDEQSKGSE
+>3_1329
+MTRQDTRETGPSGRRFGATELPPEIERVVQQAKRLEWVTLGVIVVTIVLVAIVMGSSQAM
+RAAWIEDLLSLIPPIAFLIALRVARMAPTRARPYGSHRSVGVGHLVAAVALSVMGVVLVG
+DSLLGLVTAEHPPIGTFDLFGHTVWQGWFMMAVMALSVPGPMILGHKKLTLAEQLHDRVL
+YADADMNKADWQTGVATIVGVAGIGLGWWWADSAAAIFVGVSIVLDGWKNLKEAVTNLAD
+RRATTIDGARPHPLIDRAERVAWAEPWVRHAGARVRDEGHVFHVEMFVVPHEGADVTVAR
+CCALRDAIAALDWKLQDVVVAPVDELPAEVHGGRSGEHQTGEE
+>4_1544
+MTRRDTRETGPSGRRFGATELPPEIERVVQQAKRLEWATLGVIVVTIVLVAIVMGSSQAM
+RAAWIEDLLSLIPPIAFLVALRVARMAPTRARPYGSHRSVGVGHLVAAVALSVMGVVLVG
+DSLLGLVTAEHPPIGTFDLFGHTVWQGWFMMAVMALSVPGPMILGHKKLKLAEQLHDRVL
+YADADMNKADWQTGVATIVGVAGIGLGWWWADSAAAIFVGVSIVLDGWKNLKEAVTNLAD
+RRAATIDGARPHPLIDRVERVAWAEPWVRQAGARVRDEGHVFHVEMFVVPHEGADVTVGR
+CCALRDAIAALDWKLQDVVVAPVDELPAEVHGGRSGEHQTGEE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000836.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000836.fa
new file mode 100644
index 0000000000000000000000000000000000000000..859f0b66e8bf6e2b68927d1e2240007d79502037
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000836.fa
@@ -0,0 +1,110 @@
+>0_1220
+MREQEFPRLARARAAARPEEGQTRPDPAAWVASLGSGAENDTMLRFAPSAANSIDVTAAN
+SSGVSQLLLGRRTRLSTLLPAGPALQAAEEVAAGLRAKVRELSEERGIDVGALAVGVATW
+TAEEDGRRERRSAPVLLARVALTVRRGARGRGELEVQITEPARLNPALVRNLRRHHGIAL
+DPEAYRQAAYATARLEQRPALARLREEAAALTGLQVEDRMLVSTFADLGETATLPASLEH
+LPVVEALYDAGTGMVPRPPALQPTEAPGEDDVAPADERLVLDLDAAQRRVVEHSAAGESL
+VVAAAPGTGQTQTAVAVAARLAWEGRRVLVVAERSAALADVHARLDEIGLRAAALDVPAH
+ADPEQLRRQLVQAVLRAERAEAPDAARDEAALTERRRRLQEHVGSLHHVRPRWGCSPFQA
+MQALAALTGLPTPPATTVRLKRSVLDSTVNRQAVAEQLVRAGELGAFSAAATESRWFGAR
+VRNVQETEAASELADELAAALHTTRRAVDTAAAQAGLRPERTVAGWAEQADLYRRVARTL
+TEFTPEVFALDVPQLVAATATSTWRRTHLVEMSSVARSRLRRAAKDAVRPGVQPTDLHGA
+LVDAAAVLEDWNRHAAEPGTPPQVPDQGERVMGVVGDVRERLRRLERILAPEAVAEQPLA
+ERDVDDLVAAVDGLVADRDTLATLPERTLVLDSLKDHGLTELLTDLRDREVPTEALAAEL
+ELAWWQSALEAMISGDDFLAMMSGADLAEVERGFRELDRAHLERGADRLSAALGARWKEA
+LRTFRADAAVLRGLLKQGRPTVEALTTLAPEVLQPLVPVVTTSPMALSEFPSDWGADVVV
+LLEADATALATAVGALTRAPQVVAFGDPVIGRPQSFQVSVDPTATAGPLRPLRSAHDALA
+EVLPTVALRTVHRPLERRLVRMLSALAYEGALEALPTAGEATGRDRTVTAEYLQEGTGIP
+MTGGDVVESTNAEVARTVERVFEHIRDRPEQSLAVVTVSEPHARRVAAAVQATAARASWA
+LDFLSRGRGEDAEGAEPFVIVPVTRAASVVRDAVILTPGYGRTPHGRVVHHFGAFSDPGG
+ERMVAVALTRARQRLHLVSALRAADLDEDRLDGGAQWFLRLLEAYLGDGAPDPVGRVSDP
+LLADLRERLEERGARVLPRHGGVMDLAVVDPHPEDEDEDGDAPRPLALAGDGGDVYRALT
+VRERTRTLPERLEARGWDPRTLWAIEVFADPESVAQELADRLGVRPADESERDADDDGR
+>1_1594
+MTEQEFPRLARARAAARPDEGQTRPDPAAWVSSLGSGAENDTMLRFAPSAANSIDLTEAN
+SSGVSQLLLGRRTRLSTLLPAGPELDAAHEVSLGLRAKVRELAEERGIDVGALAVGVATW
+TAEEDGRRERRSAPVLLARVALTVRRGARGRDELEVQITEPARLNPALVRNLRRHHGIAL
+DPEAYQQAAYATARLEPAPAFARLREETAAIADLHIQDCLLVSTFADLGETASLPASLED
+LPVVQALYDAGTGMVPRPAALQPTGAPAEDDVAPADERLVVDVDAAQARVLEHAAAGESL
+VVAAAPGTGQTQTAAALAARLAWEGRRVLVVAERSAALADVLDRLEEADLRSIALDVPAN
+ADPELLRRQLVQAVLRSERAVDPDTARDEAALTERRRRLQEHVGSLHHVRPRWGCSPFQA
+MQALAALTGLETPPATTVRLKRSVLDSTVNRQAVGEQLVRAGELGAFSAAATESRWFGAR
+VRNVQETEAASELADELAAALHTTRRAVDTAAAQAGLRPERTVAGWAEQADLYRRVARTL
+TEFTPEVFSLDVPQLVAATATSSWRRLHLVEMSSVTRSRLRRAAKDAVRPGVQPTDLHGA
+LVDAAAVLEDWNRHAAEPGTPPQVPDQGEHVMGQVGQVRERLRRLEGVLAPEAVAEAPLE
+ERDVDDLVAAVDGLVADRDTLATLPERTLVLDSLRDHGLAELLEDLRDREVPTEALTAEL
+ELAWWQSALEAMISGDDFLAMMSGTDLAEVERGFRDLDRAHLERGGARLSAALAARWREA
+LRTYRADAAVLRTLLKQGSPTVESLATITPELLQPLVPVVTTSPMALSEFPPEWRADVVV
+LLEADATALATAMGALTRAPQVVALGDPVIGRPQSFQVSVDPTATAGPLRPLRSAHDALD
+EVLPTLPLRTVHRPLERRLVRLLSALAYDGALDALPTAGEATGRDRAVTAEYLPEGTGIP
+MTGGDVVESTNAEVARTVERVFEHIRDRPEQSLAVVTVSEQHARRVAAAVQATAAQAPWA
+HEFLARGRGEDAADAEPFVIVPVVRAASVVRDAVILTPGYGRTPHGRVVHHFGAFSDPDG
+ERMVTVALTRARRRLHLVSALRAADLDEDRLDGGALWFLRLLEAYLGDDAADPVGMVGDP
+LLADLRDRLEEHGARVLPRYAGVMDLAVLDPRADQDEAPRPLALAGDGGEVYRALTVRQR
+SRTLPEGLEARGWEPRTLWSIDVFADPESVARELADRLGVEPADETDETDDDAR
+>2_1132
+MTEQEFPRLARARAAVRPAEQDQERPDPAAWVASLGSGAESDTMLRFAPSAANSIDLTGA
+GTSGLSQLLLGRRTRLSTLLPAGPELDAAQEVAAALRAKVRELGEERGIDVGALALGVAT
+WSAVEDGRRERRTAPVLLARLAFSVRSGARGRDEVELQIVEHAHLNPALVRNLRRHHGLR
+LDPEAYQHAAYATSRLEPGPALALLREEAAGVEGLEVQETLLVSTFADLGDTATLPESLE
+HLPVVQALYDVGTGMVPRPAELRPTGRPDEDELPPADERLVLDADPSQLRALDHAAAGES
+LVVRTAPGTGQTQTAVNLAARLAWEGRRVLVVAERSSALADVHARLAQAGLRDAALDVPA
+HADPEDLRRQLVAAVLRAERASAPDRAAADAELEELRRRLREHVDSLHHVRPRWGCSPFQ
+AMQALASLTALDTPPATTVRLKRSVLDSTVDRHAVAGRLTRAGELGAFDRDATASRWFGA
+RVRNVQETEAAGELVEHLAGTLYTTRRAVEAAADQAGLRRPRTVDGWAEQSDLFARVERA
+LTAMDPSVFSLDVPQLVTATASSQWRRSNAVEMSSVQRSRLRRAAKDAVKPGVQVPDLHQ
+ELMEVEGILEDWRRWTAIPGSTPMVPDMADHARPAVRDVLDALDRLSQVLAPEATAGTPL
+AEQDVDDLMAAVDGLVADRPTLATLPERTLVLDELREHGLNELLEDLHAREVPVAALPAE
+LELAWWQSALEAMISGDDFLAMMSGADLTAVEQGFRAADRTLLDSGGARLAASLGAAWKA
+ALGTYRADAAVLRSLLKQGRPSVESLATITPGLLQALVPIVTTSPMALTEFPPDWDADVV
+ILLEADATALATVAGALTRAPQVVAFGDPAIGRPQSFQVSVDPTATAGPLRPLRSALSAL
+AEVLPVLDLRHVHRPLPRSLVRLVSHVAYEGAVDALPTAAEFTGRGRTLTAEYVAEGVGI
+PMTGGDVVESTDAEVARTVERVFEHIRDRPEESLAVVTVSEQHARRVAGAVQATAARAPW
+AADFLARGRTDGDEREPFVIVPVLRASTVTRDAVILTPGYGRTPHGRVVHHFGALSDPDG
+ERMLTVALTRARARMHVVTALRAADLDADRLDGGALAFRRMLEVALDDAEAAPAGRLSDP
+LLLDLRDRLAAEDALVAAHYGGAMDLAAADAAGERGRVRPLALVSDGGDAYREQSVRERS
+RRLPERLEARGWDTDTLWAIDVFADPESVAARLVGRLGLPLEEVDEDGEDDADGES
+>3_1309
+MTEQEFPRLARARAAARPDEGQTRPDPAAWVASLGSGAENDTMLRFAPSAANSIDLTEAN
+SSGVSQLLLGRRTRLSTLLPAGPELDAAHEVSLGLRAKVRELAEERGIDVGALAVGVATW
+TAEEDGRRERRSAPVLLARVALTVRRGARGRDELEVQITEPARLNPALVRNLRRHHGIAL
+DPEAYQQAAYATARLEPAPAFARLREETAAIADLHVEDCLLVSTFADLGETASLPASLED
+LPVVQALYDAGTGMVPRPAALQPTGAPAEDDVAPADERLVVDVDAAQARVLEHAAAGESL
+VVAAAPGTGQTQTAAALAARLAWEGRRVLVVAERSAALADVLDRLEEADLRSIALDVPAN
+ADPELLRRQLVQAVLRSERAVDPDTARDEAALTERRRRLQEHVGSLHHVRPRWGCSPFQA
+MQALAALTGLETPPATTVRLKRSVLDSTVNRQAVGEQLVRAGELGAFSAAATESRWFGAR
+VRNVQETEAASELADELAAALHTTRRAVDTAAAQAGLRPERTVAGWAEQADLYRRVARTL
+TEFTPEVFSLDVPQLVAATATSSWRRLHLVEMSSVARSRLRRAAKDAVRPGVQPTDLHGA
+LVDAAAVLKDWNRHAAEPGTPPQVPDQGEHVMGHVGQVREHLRRLEGVLAPEAVAEGPLD
+ERDVDDLVAAVDGLVADRDTLATLPERTLVLDSLRDHGLAELLEDLRDREVPTEALTAEL
+ELAWWQSALEAMISGDDFLAMMSGTDLTEVERGFRDLDRAHLERGGARLSAALAARWREA
+LRTYRADAAVLRTLLKQGSPTVESLATITPELLQPLVPVVTTSPMALSEFPPEWRADVVV
+LLEADATALATAMGALTRAPQVVALGDPVIGRPQSFQVSVDPTATAGPLRPLRSAHDALD
+EVLPTLPLRTVHRPLERRLVRLLSALAYDGALDALPTAGEATGRDRAVTAEYLPEGTGIP
+MTGGDVVESTNAEVARTVERVFEHIRDRPEQSLAVVTVSEQHARRVAAAVQATAAQAPWA
+HEFLARGRGEDAADAEPFVIVPVVRAASVVRDAVILTPGYGRTPHGRVVHHFGAFSDPDG
+ERMVTVALTRARRRLHLVSALRAADLDEDRLDGGALWFLRLLEAYLGEDAADPVGMVGDP
+LLADLRDRLEEHGARVLPRYGGVMDLAVLDPRAEQDEAPRPLALAGDGGEVYRALTVRQR
+SRTLPEGLEARGWEPRTLWAIDVFADPESVARELADRLGVEPADETDETDDDVR
+>4_1524
+MTEQEFPRLARARAAARPDEGQTRPDPAAWVSSLGSGAENDTMLRFAPSAANSIDLTEAN
+SSGVSQLLLGRRTRLSTLLPAGPVLDAAHEVSLGLRAKVRELAEERGIDVGALAVGVATW
+TAEEDGRRERRSAPVLLARVALTVRRGARGRDELEVQITEPARLNPALVRNLRRHHGIAL
+DPEAYQQAAYATARLEPAPAFARLREETAAIADLHIQDCLLVSTFADLGETASLPASLED
+LPVVQALYDAGTGMVPRPAALQPTGAATEDDVAPAEERLVLDVDAAQARVLEHAAAGESL
+VVAAAPGTGQTQTAAALAARLAWEGRRVLVVAERSAALADVLDRLEEADLRSIALDVPAN
+ADPELLRRQLVQAVLRSERAVDPDTARDEAALTERRRRLQEHVGSLHHVRPRWGCSPFQA
+MQALAALTGLETPPATTVRLKRSVLDSTVNRQAVGEQLVRAGELGAFSAAATESRWFGAR
+VRNVQETEAASELADELAAALHTTRRAVDTAAAQAGLRPERTVAGWAEQADLYRRVARTL
+TEFTPEVFSLDVPQLVAATATSAWRRLHLVEMSSVTRSRLRRAAKDAVRPGVQPTDLHGA
+LVDAAAVLEDWNRHAAEPGTPPQVPDQGEHVMGQVGQVRERLRRLEGVLAPEAVAEGPLD
+ERDVDDLVAAVDGLVADRDTLATLPERTLVLDSLRGHGLAELLEDLRDREVPTEALTAEL
+ELAWWQSALEAMISGDDFLAMMSGTDLAEVERGFRDLDRAHLERGGARLSAALAARWREA
+LRTYRADAAVLRTLLKQGSPTVESLATITPELLQPLVPVVTTSPMALSEFPPEWRADVVV
+LLEADATALATAMGALTRAPQVVALGDPVIGRPQSFQVSVDPTATAGPLRPLRSAYDTLD
+EVLPTLPLRTVHRPLERRLVRLVSALAYDGALDALPTAGEATGRDRAVTAEYLPEGTGIP
+MTGGDVVESTNAEVARTVERVFEHIRDRPEQSLAVVTVSEQHARRVAAAVQATAAQAPWA
+HEFLARGRGEDAAEAEPFVIVPVVRAASVTRDAVILTPGYGRTPHGRVVHHFGAFSDPDG
+ERMVTVALTRARRRLHLVSALRAADLDEDRLDGGALWFLRLLEAYLGDDAADPVGMVGDP
+LLADLRDRLEEHGARVLPRYAGVMDLAVLDPRAEQDEAPRPLALAGDGGEVYRALTVRQR
+SRTLPEGLEARGWEPRTLWSIDVFADPESVARELADRLGVEPADETDETDDDVR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000838.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000838.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a052f4f91a895c3a380dc1939c3db7b95328b624
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000838.fa
@@ -0,0 +1,15 @@
+>0_1222
+MPTYAYRCRDCGHAFDAVQSFTDDALTQCPECGGVLRKQYGSVGVSFKGSGFYRTDSRSA
+GSASSGSASSAGSASSSTSAGGSGTSSTSSGGSGSSGSSSSSSGSKD
+>1_1592
+MPTYAYRCKDCGHAFDVVQAFTDDALTECPACGGVLRKQYGSVGVSFKGSGFYRTDSRSG
+TGGTGSAGGSTSDSAAGSSTSSTSSSSSPAAD
+>2_1134
+MPTYAYRCKDCGHAFDAVQSFSDDALTECPVCGGVLRKQYGSVGVSFKGSGFYRTDSRGG
+APSSTPAAPSSGAASSTGTSSGSSD
+>3_1307
+MPTYAYRCKDCGHAFDVVQAFTDDALTECPACGGVLRNQYGSVGVSFKGSGFYRTDSRSG
+TGGTGSAGGSTSDSAAGSSTSSTSSSSSAAAD
+>4_1522
+MPTYAYRCKDCGHAFDVVQAFTDDALTECPACGGVLRKQYGSVGVSFKGSGFYRTDSRSG
+TGSAGGSTSDSAAGSSTSSTSSSSSAAAD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000840.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000840.fa
new file mode 100644
index 0000000000000000000000000000000000000000..be7516085407a82a4bcd3388898348e041d3193a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000840.fa
@@ -0,0 +1,25 @@
+>0_1224
+MSWQRSPWPVTLRHGTLSLRPLRRRDRDAWEAQRAHNHAWLTPWDATSPVPGAGPSSFGQ
+MVRWHGRQGREGSSFTWGVALDDDAPDRDRLVGLLSLGGIQYGSVLSGSIGYWIDRREAG
+RGLTPTAVAMAADWAFRSAGLHRVEVNIRPENAASLRVVEKLGLRDEGVRRSYLHVDGDW
+RDHRTFAITAEEVPEGLLARWLASRPRA
+>1_1590
+MSWQRSPWPVTLRHGTLALRPLRRRDREAWEEQRAHNREWLTPWDATSPVPGAGPASFGQ
+MVRWHGRQGRDGSAYTWGMALDDDRPDRDRLVGLLSLGGIQYGSVLSGSIGYWIDRREAG
+RGLTPTAVAMATDWAFRSAGLHRVEVNIRPENAASLRVVAKLGLRDEGLRRAYLHVDGAW
+RDHRTFAVTAEEVPDGLLAGWLATRPRP
+>2_1136
+MDVSGSLWPVALRHGTLTLRPLRRGDRRAWEEQRAANRDWLTPWDATSPVPGAAPASFAQ
+MVRWQHRQARAGTSYTWGMALDDDAPGRDRLIGLLSLGGVQHGSVMSGAVGYWIDRRQAG
+RGLTPTAVAMATDWAFHGLGLHRVEVNIRPENTASLRVAEKLGLREEGLRRAYLHVDGAW
+RDHLSFAVTAEEVPEGLLPRWLARREAAAGTAEPRDTAHTPGVAGDVPGPSGR
+>3_1305
+MSWQRSPWPVTLRHGTLALRPLRRRDREAWEEQRAHNREWLTPWDATSPVPGAGPASFGQ
+MVRWHGRQGRDGSAYTWGMVLDDDDRPDRDRLVGLLSLGGIQYGSVLSGSIGYWIDRREA
+GRGLTPTAVAMATDWAFRSAGLHRVEVNIRPENAASLRVVAKLGLRDEGLRRAYLHVDGA
+WRDHRTFAVTAEEVPDGLLARWLASRPRA
+>4_1520
+MSWQRSPWPVTLRHGTLALRPLRRRDREAWEEQRAHNREWLTPWDATSPVPGVGPASFGQ
+MVRWHGRQGRDGSAYTWGMVLDDDRPDRDRLVGLLSLGGIQYGSVLSGSIGYWIDRREAG
+RGLTPTAVAMATDWAFRSAGLHRVEVNIRPENAASLRVVAKLGLRDEGLRRAYLHVDGAW
+RDHRTFAVTAEEVPDGLLARWLATRPRP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000845.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000845.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0f16edc63ab49e1023e9b73af724ffeb69d449a0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000845.fa
@@ -0,0 +1,38 @@
+>0_1231
+MPTASESSDAADASATPEPTPLPDGEPAADAAEAGRVVERLLQGDAEAGASPEPGDAVAV
+LGSSAGVLRLSAVVTATTAARLELDALEDLNGRCEGLTAALPAGLAGDPQANAALHARLD
+RLAGCRPGTWREEDASAAAVVVADQAQLGLLSATDPEIPASMLVPLEDPERVLPEGRLAA
+VGAPDALDDDAQRRIEEVLSALDEDGLRELERITTGADALPPAEAARYWLVDQGLEDVPE
+GWFMPRDSWF
+>1_1585
+MSRPAHRRPTALAASALALSLALGACARQADAPPTPSASGTPITVVHGGEGLEGAVAAVL
+ARHLRLHGHAVADEDGVAVEQPAWSAAGGDTVAVVDTLALAVAADPAVALPSPPPPTSTP
+SSTPTGTEAGPSADAVPTPSATASTAVPSPTALPVGDPAADAQAAGRVLETLLAEETAAA
+GTPQDEAPAVLSSSAGVLRLTAVVTQTTAARLELESITDLNGWCESLTAVAPPPLTAAAD
+PDAATALRARLDRLAGCRPETWLADTEDPSAALVADEAQVALLTDTDPEIDANTLVPLED
+DGRVLPEGRLTAVGSAATLDDDAERRIAEVMSALDGDGLRELERLTTGADPLPAAEAAQY
+WLVDHGLEDAPEDWFVPRGSWF
+>2_1141
+MTRPAERPRTSRVRAAAGASALSLALALSGCGAPRAGAPADPTGAPVTVVHTSDPLDSAV
+AAVVARHLRHRGHPVTLEDAGDATPWSAAAGDTVAVVDTLRLALQADPAAVLPPEPEDAA
+ASRAAAAPTPSESSLEPIDPSAPARVPATGSATPSPTPLASGLPAADADAAQAVVDAALS
+RVAAGADAAAPTPAASRSAATPTGPSPRVLADSAGTLRLAAVVTATTASREGLDSIDDLD
+GRCGDLTLAVPAALAAAVSDGLLAHRLDDFAGCRPADWRTDAADVGPAVVADAAQVGLTY
+RTDPDIPPNGLVLLEDPDRVLPEGRIAVVGERETLDDDAQSALGEVMDRLDDDGIAELAR
+LTEGGDALPADEAAQYWLVSQRLEDAPEDWVVPADPWF
+>3_1300
+MSRPAHRRPTALAASALALSLALGACARQADAPPTPSASGAPITVVHGGEGLEAAVAAVL
+ARHLRLHGHAVADEDGVAVEQPAWSAAGGDTVAVVDTLALAAAADPAAALPSPPTPTPTP
+TPTGTEAGTSTGTVPTPSATASTAAPSPTALPVGDPAADAPAAGRVLETLLAGQTAAAGT
+PQDEAPAALSSSAGVLRLTAVVTQTTAARLELESITDLNGRCESLTAVAPPALTSAADAA
+TALRARLDRLAGCRPETWLADTEDPTAAVVADEAQVALLTGTDPEIDANTLIPLEDDGRV
+LPEGRLTAVGSAATLDDDAERRIAEVMSALDGDGLRELERLTTGADPLPVAEAAQYWLVD
+QGLEDAPEDWFVPRGSWF
+>4_1514
+MSRPAHRRPTALAASALALSLALGACARQADAPPTPSASGTPITVVHGGEGLEGAVAAVL
+ARHLRLHGHAVADEDGVAVEQPAWSAAGGDTVAVVDTLALAAAADPAAALPSPPSPTSTP
+SSTPTGTEAGTSADAVPTASTAAPSPTALPVGDPAADAPAAGRVLETLLAEETAAAGTPQ
+AEAPAVLSSSAGVLRLTAVVTQTTAARLELESITDLNGRCESLTAVAPPTLTAAADADAA
+TALRTRLDRLAGCRPETWLADTEDPTAAVVADEAQVALLTGTDPEIDANTLVLLEDDGRV
+LPEGRLTAVGSAATLDDDAERRIAEVMSALDGDGLRELERLTTGDDPLPVAEAAQYWLVD
+HGLEDAPEDWFVPRGSWF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000847.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000847.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a057fa066a6e618a1403c489eae8c95c6c1dc1a5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000847.fa
@@ -0,0 +1,34 @@
+>0_1233
+MAENGTAETVRPDDAEGAETGVFSAPARELFAARRGDAVADPADVDASATPGYTGGKAQG
+KQDLADRADVLADLQELLFAQSTREAPSGEVPSLLLVIQGMDTAGKGGIMRHVIGAMDPQ
+GVHLHAFKAPTAEERAHDFLWRIRPHLPRPGRVSVFDRSHYEDVLVHRVRELSPLAEVEE
+RYGAIREFESRVRAAGTRIVKVMLRISAEEQAERLLARLDDPTKHWKFNEGDLDDRAYWD
+DYMDAYRIAIERTDTEDAPWFVVPADRKWFARLAVQQLLIETLQGLDLDWPEADFDVEAA
+RRRLLAG
+>1_1583
+MADTPATEAGRPARATDDGVFGAPARELFAARRGDEVRGPADVDAAATPGYGGDKAKGKK
+DLAARGAVLADLQELLFAQSVRDAPVGEVPSLLVVLQGMDTAGKGGIMRHVIGAMDPLGV
+HVHAFKAPTPEERAHDFLWRIRPHLPRPGLVSVFDRSHYEDVLVHRVRGLSPLAEVEERY
+GAIREFEAAVRAAGTRIVKVMLRISPEEQAKRLLARLDDPTKHWKFSESDLDDRAYWDQY
+MDAYRIAIERTDTEDAPWFIVPADRKWFARLAVQQLIIETLQGMGLDWPKADFDVAAARR
+RLLAG
+>2_1143
+MADTPENRFTEPVRTLLRARRADGAPVGPADVDPHGKPGFDGGKSEGRAVLAARSERLGQ
+LQELLYAQSTREADGGLPAPSVLLVVQGMDTAGKGGIMRHVVGQMDPQGVDVHAFKRPTP
+EEARHDFLWRVRPHLPMPGTLSVFDRSHYEDVLIQRVRSLAPAEEIERRYTAIREFEAEA
+VAAGIRVVKVMLHISPEEQKARLSERLERADKHWKFNPGDLDERELWDEYQEAYRVALHR
+TDATDAPWFIVPADRKWYARVAVQELMIETLEAMGLTWPEADFDVAAARRRLLAG
+>3_1298
+MADTPATEAGRPARATDDGVFGAPARELFAARRGDEVRGPADVDAAATPGYGGDKAKGKK
+DLAARGAVLADLQELLFAQSVRDAPVGEVPSLLVVLQGMDTAGKGGIIRHVIGAMDPLGV
+HVHAFKAPTAEERAHDFLWRIRPHLPRPGLVSAFDRSHYEDVLVHRVRGLSPLAEVEERY
+GAIREFEAAVRAAGTRIVKVMLRISPEEQAKRLLARLDDPTKHWKFSESDLDDRAYWDQY
+MDAYRIAIERTDTEDAPWFIVPADRKWFARLAVQQLIIETLQGMGLDWPKADFDVAAARR
+RLLAG
+>4_1512
+MADTPATAAGRPARATDAHGVFDAPARELFAARRGDEVRGPADVDAAATPGYGGDKAKGK
+KDLAARGRELADLQELLFAQSVRDAPVGEVPSLLVILQGMDTAGKGGIMRHVIGAMDPQG
+VHLHAFKVPTPEERAHDFLWRIRPHLPRPGLVSVFDRSHYEDVLVHRVRGLSPLAEVEER
+YGAIREFEAAVRAAGTRIVKVMLRISPEEQAERLLARLDDPTKHWKFSEGDLDDRAYWDQ
+YTDAYRIAIERTDTEDAPWFIVPADRKWFARLAVQQLIIETLQGMGLDWPEADFDVAAAR
+RRLLAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000848.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000848.fa
new file mode 100644
index 0000000000000000000000000000000000000000..61c0d5f704275de57210c8a1a02453f296be3e63
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000848.fa
@@ -0,0 +1,15 @@
+>0_1235
+MSEQQQEQTGAPVEGFTSADTSDVAGMSYEQARAELVETVTRLEAGGGRLEESLALWERG
+EALAARCQAWLDGARARLDEVRGAADSPTA
+>1_1581
+MSEQGMEQTQDAGRPSGVEGFTSADVSDVARMSYEQARAELVETVGRLEAGGAGLEESLA
+LWERGEALADRCQAWLDGARARLDQVRGEAAPDAD
+>2_1145
+MSEQEQQGTAVGGFTSADTSDVARMSYEQARAELVEVVGQLEAGGAGLEESLALWERGEA
+LADRCQAWLDGARARLDQVRGEAAPDAD
+>3_1296
+MSEQGMEQTQDPGRPSGVEGFTSADVSDVARMSYEQARAELMETVGRLEAGGAGLEESLA
+LWERGEALADRCQAWLDGARARLDQVRGEAAPDVD
+>4_1510
+MSEQGMEQTQDAGRPSGVEGFTSADVSDVARMSYEQARAELVETVGRLEAGGAGLEESLA
+LWERGEALADRCQAWLDGARARLDQVRGEAAPDAD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000859.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000859.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f87def824bbc5776cf549c0eef6f57f2f5db223e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000859.fa
@@ -0,0 +1,26 @@
+>0_1266
+MRLVGTVTLARDSVVYDHKSSVPTNERAPDMSRILMILTSHDQLGDTGRKTGFWLEEFAS
+PYYVFTDAGHEVTLASPRGGQPPIDPTSSKPEMQTEATRRFDQDDEAKAALAHTTPLAQV
+DVDGFDAVFYPGGHGPLWDLVSDADSTRIILDSDAAGRPLGLVCHAPGILHPITAADGTP
+FVRGRQVAGFTNGEEDAAQLTDVVPFLVEDSLIAAGADYRKGPDGESFVVTDGTLVTGQN
+PASSADAARRLLDLLAR
+>1_1549
+MSRILMILTSHDQLGDTGRKTGFWLEEFASPYYVFTDAGHEVTLASPRGGQPPIDPTSSK
+PEMQTEATRRFDQDEEAKAALAHTTPLAQVDVDGFDAVFYPGGHGPLWDLVSDADSTRII
+LDSDAAGRPLGLVCHAPGILHPITAADGTPFVRGRQVTGFTNGEEEAAQLTDVVPFLVED
+SLIAAGADYRKGPDGESFVVTDGTLVTGQNPASSADAARRLLDLLAR
+>2_1175
+MSRILMILTSHDQLGDTGRKTGFWLEEFASPYYVFTDAGHEVTLASPRGGQPPIDPTSSK
+SEMQTEATRRFDQDEEAKAALAHTTPLAQVDVDGFDAVFYPGGHGPLWDLVSDADSTRII
+LDSDAAGRPLGLVCHAPGILHPITTADGTPFVRGRQVAGFTNGEEEAAQLTDVVPFLVED
+SLIAAGADYRKGPDQESFVVTDGTLVTGQNPASSADAARRLLDLLAR
+>3_1271
+MSRILMILTSHDQLGDTGRKTGFWLEEFASPYYVFTDAGHEVTLASPRGGQPPIDPTSSK
+PEMQTEATRRFDQDEEAKAALAHTTPLAQVDVDGFDAVFYPGGHGPLWDLVSDADSTRII
+LDSDAAGRPLGLVCHAPGILHPITAADGTPFVRGRQVTGFTNGEEEAAQLTDVVPFLVED
+ALIAAGADYRKGPDGESFVVTDGTLVTGQNPASSGDAARRLLDLLAR
+>4_1476
+MSRILMILTSHDQLGDTGRKTGFWLEEFASPYYVFTDAGHEVTLASPRGGQPPIDPTSSK
+PEMQTEATRRFDQDEEAKAALAHTTPLAQVDVDGFDAVFYPGGHGPLWDLVSDADSTRII
+LDSDAAGRPLGLVCHAPGILHPITAADGTPFVRGRQVTGFTNGEEEAAQLTDVVPFLVED
+SLIAAGADYRKGPDGESFVVTDGTLVTGQNPASSADAARRLLDLLAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000860.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000860.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0350b6722d55f78df5b39f6d98b9ab07e6f6a291
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000860.fa
@@ -0,0 +1,34 @@
+>0_1267
+MSVDPYMRGRMNDVKSYVPPFQLDAPLDGGAVGTVIASRHADVPEGTSVLHGLGWREHAV
+LDGDTVQAVDTSQFPDSTYLGVLGMTGLTAYTGLVHVAEMQEGDAVFISGAAGAVGSVAG
+QIARLLGASRVVGSAGTPEKVARVKELGFDAAFDYHDGSPTDLLAEAAPEGIDVYFDNVG
+GDHLEAAIAALRVDGRVAMCGAIAQYNSTEPPAAPRNLALAIGKRLTLRGFVLQKYAAQV
+RPEFLERVGPWVAAGKIQWDETVREGLENAPQAFIDLLDGANTGKMLVRL
+>1_1548
+MSTPTRTREIHLASRPHGAPTPENFRLTEVELPELAEGQVLVRNTVMSVDPYMRGRMNDV
+ESYVPPFQLDAPLDGGAVGTVIASRHADVPEGTSVLHGRGWREHAVLDGDTVQVVDTSQF
+SDSTYLGVLGMTGLTAYTGLVHVAEMQEGDAVFISGAAGAVGSVAGQIARLLGASRVVGS
+AGTPEKVARVKELGFDAAFDYHDGSPTDLLAEAAPEGIDVYFDNVGGDHLEAAIAAMRVD
+GRVAMCGAIAQYNSTEPPAAPRNLALAIGKCLTLRGFVLQKYAAQVRPEFLERVGPWVAA
+GKIQWDETVREGLENAPQAFIDLLEGANTGKMLVRL
+>2_1176
+MSTPTHTREIHLASRPHGAPTPENFRLTEVELPELAEGQVLVRNTVMSVDPYMRGRMNDV
+ESYVPPFQLDAPLDGGAVGTVIASRHADVPEGTSVLHGLGWREHAVLDGDTVQAVDTSQF
+SDSTYLGVLGMTGLTAYTGLVHVAEMQEGDAVFISGAAGAVGSTAGQIARLLGASRVIGS
+AGTPEKVARVKELGFDAAFDYHDGSPTDLLAEAAPEGIDVYFDNVGGDHLEAAIAAMRVD
+GRVAMCGAIAQYNSTEPPAAPRNLALAIGKRLTLRGFVLQKYAAQVRPEFLERVGPWVAD
+GKIQWDETVREGLENAPQAFIDLLEGANTGKMVVRL
+>3_1270
+MSTPTHTREIHLASRPHGAPTPENFRLTEVELPELAEGQVLVRNTVMSVDPYMRGRMNDV
+ESYVPPFQLDAPLDGGAVGTVIASRHADVPEGTSVLHGRGWREHAVLDGDTVQVVDTSQF
+SDSTYLGVLGMTGLTAYTGLVHVAEMQEGDAVFISGAAGAVGSVAGQIARLLGASRVVGS
+AGTPEKVARVKELGFDAAFDYHDGSPTDLLAEAAPEGIDVYFDNVGGDHLEAAIAAMRVD
+GRVAMCGAIAQYNSTEPPAAPRNLALAIGKCLTLRGFVLQKYAAQVRPEFLERVGPWVAA
+GKIQWDETVREGLENAPQAFIDLLEGANTGKMLVRL
+>4_1475
+MSTPTRTREIHLASRPHGAPTPENFRLTEVELPELAEGQVLVRNTVMSVDPYMRGRMNDV
+ESYVPPFQLDAPLDGGAVGTVIASRHADVPEGTSVLHGRGWREHAVLDGDTVQVVDTSQF
+SDSTYLGVLGMTGLTAYTGLVHVAEMQEGDAVFISGAAGAVGSVAGQIARLLGASRVVGS
+AGTPEKVARVKELGFDAAFDYHDGSPTDLLAEAAPEGIDVYFDNVGGDHLEAAIAAMRVD
+GRVAMCGAIAQYNSTEPPAAPRNLALAIGKCLTLRGFVLQKYAAQVRPEFLERVGPWVAA
+GKIQWDETVREGLENAPQAFIDLLEGANTGKMLVRL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000864.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000864.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4e6c845f8cb4754f97bd8bd688608297344703cd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000864.fa
@@ -0,0 +1,50 @@
+>0_1273
+MSSRIQHAGLRAKVMSAQEAAAFIRPGTTVGMSGFTGSGYPKAVPLALAERISAAHARGE
+DFRIDLHTGASTSSEMDGALAESGGVALRTPFQSDPTMRAKINAGEVEYIDTHLSHLAQT
+VWNGFYGPMHTAVVEVSAIREDGTLVPSSSVGNNKSWLDLADEVILEVNSWQSEELEGLH
+DVYYGTALPPHRQPVMITDPADRIGQPYFECDPAKVVAVVETHGPDRNSAFKPADADSIA
+IAQHLVEFFEHEVAAGRYDERLLPLQSGVGNIANAVMAELVKSRFRGLTAFTEVVQDGML
+DALDSGTLSMASATAFSLSTEAAERFNSTVAQYKDKLILRTQEISNHPELVRRLGVLAMN
+GMLEADLYGNVNSTHLMGTKMMNGLGGSGDFARNAFTSFFLTPSVAKGGDISCIVPMVSH
+VDHTEHDVHVLVTEQGLADLRGLSPKQRARTIIAKCAHPDYRDQLQDYFDRAMRGSDGLH
+TPHLLGEALSWHQRFLETGTMRHG
+>1_1543
+MSSRIHHPGLRSKVMSAAEAAAFIQHGTTVGMSGFTGSGYPKAVPTALAERAKELHARGE
+EFRINLHTGASTSAEMDGALAEADAVALRTPFQSDPTMRAKINAGAIEYIDTHLSHLAQT
+VWNGFYGPMTTAVIEVSGIREDGRLVPSSSVGNNKSWIDLADQVILEVNSWQSEDLEGLH
+DVYYGTALPPHRTPIMLTHPADRIGETYLRCDPAKVVAVVETHAPDRNSPFKPADADSIA
+IAQHLVEFFEHEVAQGRYDERLLPLQSGVGNIANAVMSELVKSRFTGLSAFTEVVQDGML
+DALDSGTLATASATAFSLSTEAAERFNDNAAKYRDKLILRTQEISNHPELVRRLGILAMN
+GMLEADLYGNVNSTHLMGTKMMNGLGGSGDFARNAFTSFFLTPSTAKGGDISCIVPMVSH
+VDHTEHDVHVVVTEQGLADLRGLSPKQRARTIIDTCAHPDYREQLRDYFDRAMRGSDGLH
+TPHLLGESLSWHQRFLETGTMRQG
+>2_1183
+MSSRIHHPGLRAKVMSAEEAAAFITPGMTVGMSGFTGSGYPKAVPMALAERIKSAHARGE
+DFRIDLHTGASTSVEMDGALAEADGVRLRTPFNTDPTMRAKINDGSVDYIDTHLSHLAQT
+VWEGFYGPMDAAVIEVSAIREDGTLVPSSSVGNNKSWLQLADKVILEVNSWQSEDLDGIH
+DVYYDTALPPHRKPVPVNHPSDRIGRTEFVVDLDKVVAVVETHGPDRNSPFKPADADSIA
+IAQHLVEFFEHEVKAGRYDEHLLPLQSGVGNVANAVMAELVKSRFHGLTAFTEVVQDGML
+DALDSGTLAMASCTAFSLSTEVAERFNDNVLQYKDKLIIRTQEISNHPELVRRLGILAMN
+GMLEADLYGNVNSTHLMGTKMMNGLGGSGDFARNAFTSFFLTPSTAKGGDISCIVPMVSH
+VDHTEHDVHVVVTEQGLADLRGLSPKQRARTIIDTCAHPDYREQLRDYFDRAMRGSDGLH
+TPHLLGEALSWHQRFLETGTMRQG
+>3_1265
+MSSRIHHPGLRSKVMSAAEAAAFIQHGTTVGMSGFTGSGYPKAVPTALAERAKELHARGE
+EFRINLHTGASTSAEMDGALAEADAVALRTPFQSDPTMRAKINAGAIEYIDTHLSHLAQT
+VWNGFYGPMTTAVIEVSGIREDGRLVPSSSVGNNKSWIDLADQVILEVNSWQSEDLEGLH
+DVYYGTALPPHRTPIMLTHPADRIGETYLRCDPAKVVAVVETHAPDRNSPFKPADADSIA
+IAQHLVEFFEHEVAQGRYDERLLPLQSGVGNIANAVMSELVKSRFTGLSAFTEVVQDGML
+DALDSGTLATASATAFSLSTEAAERFNDNAAKYRDKLILRTQEISNHPELVRRLGILAMN
+GMLEADLYGNVNSTHLMGTKMMNGLGGSGDFARNAFTSFFLTPSTAKGGDISCIVPMVSH
+VDHTEHDVHVVVTEQGLADLRGLSPKQRARTIIDTCAHPDYREQLRDYFDRAMRGSDGLH
+TPHLLGESLSWHQRFLETGTMRQG
+>4_1470
+MSSRIHHPGLRSKVMSAAEAAAFIQHGTTVGMSGFTGSGYPKAVPTALAERAKELHARGE
+EFRINLHTGASTSAEMDGALAEADAVALRTPFQSDPTMRAKINAGAIEYIDTHLSHLAQA
+VWNGFYGPMTTAVIEVSGIREDGRLVPSSSVGNNKSWIDLADQVILEVNSWQSEDLEGLH
+DVYYGTALPPHRTPIMLTHPADRIGETYLRCDPAKVVAVVETHAPDRNSAFKPADADSIA
+IAQHLVEFFEHEVAQGRYDERLLPLQSGVGNIANAVMSELVKSRFTGLSAFTEVVQDGML
+DALDSGTLATASATAFSLSTEAAERFNDNAAKYRDKLILRTQEISNHPELVRRLGILAMN
+GMLEADLYGNVNSTHLMGTKMMNGLGGSGDFARNAFTSFFLTPSTAKGGDISCIVPMVSH
+VDHTEHDVHVVVTEQGLADLRGLSPKQRARTIIDTCAHPDYRDPLRDYFDRAMRGSDGLH
+TPHLLGEALSWHQRFLETGTMRHG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000865.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000865.fa
new file mode 100644
index 0000000000000000000000000000000000000000..48a5af95a28296cfb960c328d5be513f0fd034a7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000865.fa
@@ -0,0 +1,20 @@
+>0_1275
+MADLRVEPGPGAPRGLVIPAAELMERFSHASGPGGQGVNTADSRVQLSLDLATTTALDES
+QRARALAVLGPRLAGTVLTVAAEEHRAQRRNRVAARERLAAMLREALIPETPRRATRPTR
+GSRRRRLEAKRQRSETKQLRRRPGV
+>1_1537
+MAEPRPGDVRVTPGPGAPRGLVIPAGELVERFSHASGPGGQGVNTADSRVQLSLDLAATS
+ALDDVQRARVLARLAPRLAGTVLTVSVAEHRAQRRNRVAARERLAALLREALAPPTPRRA
+TKPTRGSRRRRLEAKHRRSEVKRTRRRPGLD
+>2_1195
+MDDLRVPPGPGVPRGLRIPAAELSERFSHGSGPGGQGVNTADSRVQLSLDLAATTALTDA
+QRIRLLEGLAPRLAGTVLTVDAAEHRAQRRNRTAARERLAALLREALVPETPRRATKPTR
+GSQRRRLQAKARRSEVKQSRRRPRMD
+>3_1259
+MAEPRPGDVRVTPGPGAPRGLVIPAGELVERFSHASGPGGQGVNTADSRVQLSLDLAATS
+ALDDVQRARVLARLAPRLAGTVLTVSVAEHRAQRRNRVAARERLAALLREALAPPTPRRA
+TKPTRGSRRRRLEAKHRRSEVKRTRRRPGLD
+>4_1464
+MAEPRPGDVRVTPGPGAPRGLIIPAGELVERFSHASGPGGQGVNTADSRVQLSLDLAATS
+ALDDVQRARVLARLAPRLAGTVLTVSVAEHRAQWRNRVAARERLAALLREALAPPTPRRA
+TTPTRGSRRRRLEAKRRRSEVKRTRRRPGLD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000869.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000869.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8121f16f82a714b739967281a790bb633ac24ee1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000869.fa
@@ -0,0 +1,43 @@
+>0_1310
+MSHASSGAAAPSDRAPQGAVSESCRRRRFGLLPRILVAIVAGVLVGLVAPTWLVQAFATF
+NGLFSNVLGFIVPVLILALVAPAIGDIGRGAGKLLALTGGIAYGSTLFGGFGALLVCLLV
+FPLILTPGSFEAMANPEDALLGPLFEVQMDPPFGVMTALLLAFVLGIGLTMLRRGALHEG
+FDQLRSIIERVVMGLIVPLCATIHLAGSTVKIVSFSIAVLFLSGQSIDVPVFVGFIFMLG
+VTMVAAPGVPGGAIVAASGLLSSMLGFTEPQVALMVATYIAIDSFGTATNVTGDAAIAMI
+VDKIAGDRLIEDSEDEGLERLDDEEAATGADAG
+>1_1533
+MSRSHSDALDASGPDSGGAVAVPRRRFGLLPRILVAIVAGVLVGLVAPTWLVQAFATFNG
+LFSNFLGFIVPVLILALVAPAIGDIGRGAGKLLALTGGIAYGSTLVGGFGALLVCLLVFP
+LILTPGSFEGMANPEDALLGPLFEVQMDPPFGVMTALLLAFVLGIGLTMLPRGALHESFD
+QLRSIIERVVMGLIVPLLPVYIFGVFLNMTAAGEVFKVITTFLGVILLVFGLTVVLLLLQ
+YVVAGTIAGRNPFTALKTMLPAYATALGTSSSAATIPVTLRQTLLLGVRRPIASFVVPLC
+ATIHLAGSTVKIVSFSIAVLFLSGQSIDVPVFVGFIFMLGVTMIAAPGVPGGAIVAASGL
+LTSMLGFTEPQVALMVATYIAIDSFGTATNVTGDAAIAMIVDKIAGDRLIEDSEDEGLER
+LDDEGAATGADAG
+>2_1209
+MSHAAPSSSVPPAPPSSSATDGTAAPEKAPRRGLRRLGLLPRVLLGIVLGVVVGLVSPEW
+LTRTAVTGTSLFSAFLGFIVPVLIVALVAPAIAELGRGAGRWLSVTAAIAYGSTLFGGFL
+SLGVALALFPRILTPGSISGVTDPSEGGATPFFEIAMDPPFGVMTALLLSFVLGIGMTLI
+PRGVLQQGFEELRTIIERVVTGIVVPLLPFYIFGIFLAMAASGGVFEVIGTFLGVILIVF
+ALTVVLLLVQYAVAGVIAHRNPLTALKAMMPAYATALGTSSSAATIPVTLRQVVSLGVRQ
+PIAAFVVPLAATIHLAGSTVKIVAFSTAVIILTGGQVDVGLMVGFIFMLGITMVAAPGVP
+GGAIVAASGLLSSMLGFTEPQVALMVATYIAIDSFGTATNVTGDGAIALIMDRIAGDRIA
+ADPGVAEESPAA
+>3_1254
+MSRSHSDALDASGPDSGGAVAVPRRRVGLLPRILVAIVAGVLVGLVAPTWLVQAFATFNG
+LFSNFLGFIVPVLILALVAPAIGDIGRGAGKLLALTGGIAYGSTLVGGFGALLVCLLVFP
+LILTPGSFEGMANPEDALLGPLFEVQMDPPFGVMTALLLAFVLGIGLTMLPRGALHESFD
+QLRSIIERVVMGLIVPLLPVYIFGVFLNMTAAGEVFKVITTFLGVILLVFGLTVVLLLLQ
+YVVAGAIAGRNPFTALKTMLPAYATALGTSSSAATIPVTLRQTLLLGVRRPIASFVVPLC
+ATIHLAGSTVKIVSFSIAVLFLSGQSIDVPVFVGFIFMLGVTMVAAPGVPGGAIVAASGL
+LTSMLGFTEPQVALMVATYIAIDSFGTATNVTGDAAIAMIVDKIAGDRLIEDSEDEGLER
+LDDEGAATGADAG
+>4_1460
+MSRSHSDALDASGPDSGGAVAVPRRRFGLLPRILVAIVAGVLVGLVAPTWLVQAFATFNG
+LFSNFLGFIVPVLILALVAPAIGDIGRGAGKLLALTGGIAYGSTLVGGFGALLVCLLVFP
+LILTPGSFEGMANPEDALLGPLFEVQMDPPFGVMTALLLAFVLGIGLTMLPRGALHESFD
+QLRSIIERVVMGLIVPLLPVYIFGVFLNMTAAGEVFKVITTFLGVILLVFGLTVVLLLLQ
+YVVAGAIAGRNPFTALKTMLPAYATALGTSSSAATIPVTLRQTLLLGVRRPIASFVVPLC
+ATIHLAGSTVKIVSFSIAVLFLSGQSIDVPVFVGFIFMLGVTMVAAPGVPGGAIVAASGL
+LTSMLGFTEPQVALMVATYIAIDSFGTATNVTGDAAIAMIVDKIAGDRLIEDSEDEGLER
+LDDEGAATGADAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000879.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000879.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6be60e5a5a0d81970cb44a6b833234182666990f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000879.fa
@@ -0,0 +1,40 @@
+>0_1328
+MSVPPGWPPRRRRSPLALAISFFGVLGALVLAVGVTLLVAGRMVDVVGAPDPVVSARESA
+PPDAGALAQELAGAHEGVAVDWDAPAHAGSELDPGLAVDHAPGILLVETVLGQRMGTGTG
+MVLTPEGLALTNYHVVEDSSEVFVVEADTGERHTATVLGRDAEHDVAVLDVHGVTDLPVA
+SVSLDPVRRGDEVAAVGNGRGQGHLTAVRGTVLGTDRSIMAASQGSDEYARLTGLIQTDA
+DVVPGYSGGPVVDDDGQVVGVTVAASDGTGAQEVDGFAIPLGVALGVVDQVLSGEETDTV
+SIGADGALGIMVAADPEAGVVVMQVDADSAAEAIGLVPGDVVLAVDGQAVEGNASRMSRL
+VNDHNVGDRITVTWRTASGEVREAEAVLQEAVVN
+>1_1517
+MTPPGWPPRARRSPLAFVIALFGVLGALVLAGGLTALLAGRMVDVAADSAPTVPAAEAPA
+REAGELAAGLTHIHDGVAVDWSASAHDGSSLDPGQPVADAPGILLVETALGARTGTGTGM
+VLSPDGLAVTNYHVVEDSSEVHVVVADTGARHTATVLGRDAEHDIAVLDVEGVSDLPVAS
+VSLDPVRRGDQVAAVGNGGGQGHLTAVRGTVLGTDRSIMAAAEGTDQYARLSGLIQTDAD
+VVPGYSGGPVVDDAGQVVGVTVAASDGTTADEVDGFAIPLEVAFDVVDQVLTGEETDTVS
+IGADGALGIMVGADPDVGVVVMQVDAGSAAEQIGLVEGDVILEIEGRAVGDDASRMSRLV
+NDHNVGDRITVQWRTADGEVREAEAVLQPALVN
+>2_1222
+MAIAVFGVLGAVVLAVGLTLLAGGRLIAAVGAGSSSSAAAPSGPQVTTRSLDALAASLDH
+AHAGIAVPAADAPPADGSLDPGERVRRAPGVLLVETRLEAMQGTGTGMVLTSDGLALTNY
+HVVEDSTAVSVVVADTGARHAATVLGRDAKNDVAVLQIDGVSGLTTTSVSRDPVRPGEAV
+AAVGNGGGQGYLTSVGGEVLRVDQSILAATEGTDDFERLTGLIQTDADVVPGYSGGPLVD
+GEGQVVGVTVAASEGRTAAQVDGYAIPLSTAFDVVAQVLSGEETDSVSIGADGSLGISVA
+GSRDGVEVLSVDRGSAGEELGLRPGDVITAIDGRTLDGNATAMSRLVNDHEVGDRLSVQW
+RTADGEARQGEAVLQKARHN
+>3_1237
+MTPPGWPPRARRAPLAFVIALFGVLGALVLAGGLTALLAGRMVDVAADSAPTVPAAEAPA
+REAGELAAGLTHVHDGVAVDWSASAHDGSSLDPGQPVADAPGILLVETALGARTGTGTGM
+VLSPDGLAVTNYHVVEDSSEVHVVVADTGARHTATVLGRDAEHDIAVLDVEGVSDLPVAS
+VSLDPVRRGETVAAVGNGGGQGHLTAVRGTVLGTDRSIMAAAEGTDQYARLSGLIQTDAD
+VVPGYSGGPVVDDAGQVVGVTVAASDGTTAEEVDGFAIPLDVAFDVVDQVLSGEETDTVS
+IGADGALGIMVGADPDVGVVVMQVDAGSAAEQIGLVEGDVILEIEGRPVGDDAFRMSRLV
+NDHNVGDRITVQWRTASGEVREAEAVLQPALVN
+>4_1444
+MTPPGWPPRARRSPLAFVIALFGVLGALVLAGGLTALLAGRMVDVAADSAPTVPAAEAPA
+REAGELAAGLTHIHDGVAVDWSASAHDGSSLDPGQPVADAPGILLVETALGARTGTGTGM
+VLSPDGLAVTNYHVVEDSSEVHVVVADTGARHTATVLGRDAEHDIAVLDVEGVSDLPVAS
+VSLDPVRRGDQVAAVGNGGGQGYLTAVRGTVLGTDRSIMAAAEGTDQYARLSGLIQTDAD
+VVPGYSGGPVVDDAGQVVGVTVAASDGTTADEVDGFAIPLEVAFDVVDQVLSGEETDTVS
+IGADGALGIMVGADPDVGVVVMQVDAGSAAEQIGLVEGDVILEIEGRAVGDDASRMSRLV
+NDHNVGDRITVQWRTADGEVREAEAVLQPALVN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000884.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000884.fa
new file mode 100644
index 0000000000000000000000000000000000000000..880ecada6ebd8096318ee1235dc92f9275e30131
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000884.fa
@@ -0,0 +1,60 @@
+>0_1336
+MTAHGNDKEGRPMSGKKNQHDAAGTEATAVGTGAGEHGSHSADLDARGAAVPGSSGTGGP
+TPGPATSSMGVVARHDDLDGKPVLAFRDVDVKFGTEFGEVHAVKGVTFDVKPGEVVALVG
+ESGSGKSVTSATAMGLLPSNADITGSVQLAGREVLDMTPGQLRGIRGDEVAMVFQEPMTA
+LNPVLTVGDQLTEALELHGIAYGTEADKRAVELLTMVGIPDAAERLKQYPHQFSGGQRQR
+IVIAMAISCSPKVIIADEPTTALDVTVQAEILELLRSLKNKMNTGILLITHNMGVVADMA
+DRVCVMLHGELVEQGTVHQVLQHAQHPYTQKLLSSVPRLGATYEVAEPEPVTATQTTAKY
+AIEAEDLHLEYDYRGKKNRVVHDVSFQVAPGEILGLVGESGSGKSTIAKSVLGLLTIAEG
+SLRIQGHDLAAMPKSEQRKLRKNIGVVFQDPAASLDPRFPIGDVITEPMVVHKVGDRRSR
+LARAEELLDAVRLPRSVVNRYPHELSGGQRQRVSIARALTLDPQVLIADEPTSALDVSVQ
+AAVLDMFAELQQRYEFACLFVSHDLAVVDMLAHKVLVLKDGRQVEQGPTKEVLHNPREEY
+TRRLLAAAPVPDPDQQAERRQERRDFLASLGEGVY
+>1_1511
+MSANDKKGRSMFGKKKENDVTDGGQGSHAASSADLEARGAAVPGSSGAGGVPPGPATSAM
+GVVARHDDLGGEPVLAFRDVDVKFATEFGEVHAVKGVTFDVKPGEVVALVGESGSGKSVT
+SATAMGLLPGNADVTGSVKLAGREVLTMTPGQLRGIRGDEVAMVFQEPMTALNPVLTVGD
+QLTEALELHGIAYGTEADKRAVELLTMVGIPDAATRLKQYPHQFSGGQRQRIVIAMAISC
+SPKVIIADEPTTALDVTVQAEILELLRSLKNKMNTGILLITHNMGVVADMADRVCVMLHG
+ELVEQGSVHQVLQHARHPYTQKLLSAVPRLGEPLEVAEPEPVTATQTQARYAIEAENLHL
+EYDHRGKKNRVVHDVSFQVAPGEILGLVGESGSGKSTIAKSVLGLLTIAEGSLRIQGHDL
+ATMPKAEQRALRKNIGVVFQDPAASLDPRFPIGDIITEPMVVHKVGDRRSRLARAEELLD
+AVRLPRSVVNRYPHELSGGQRQRISIARALTLDPQVLIADEPTSALDVSVQAAVLDMFAE
+LQQRYEFACLFVSHDLAVVDMLAHKVLVLKDGRQVEQGPTEEVLHRPKEEYTRRLLAAAP
+VPDPDQQAERRQERREFLASLGEGVY
+>2_1228
+MSSKAFDPKDSGTTETSAEDLRARAETLPGSSGEAPQGVVTTATGSLKVPGPATTTMGVV
+EHHDDLGGEPVLAFQDVAVRFATEFGSVHAVKGVTFDVKPGEVVALVGESGSGKSVTSST
+AMGLLPPSADITGSVKLGGREVLTMTDSQLRSIRGQDVAMVFQEPMTALNPVLTVGDQLT
+EALQLHGLAFGTEATKRAVELLTMVGIPDAADRLKQYPHQFSGGQRQRIVIAMAISCSPR
+VIIADEPTTALDVTVQAEILELLRSLKDKMNTGILLITHNMGVVADMADRVCVMLHGELV
+ESGTVQQVLQRPQHPYTQRLLAAVPRLGEALETAEPEPVTSTQTAVKYAIEAEDLCIEYD
+HRGKKNRVVHDVSFQVAPGEILGLVGESGSGKSTIAKAVLGLLPVASGALRLQGEDLATM
+KAAEQRALRRKIGVVFQDPAASLDPRFPIGDVITEPMVIHGVGDRRSRLARAEELLDAVR
+LPRDVVNRYPHELSGGQRQRVSIARALTLDPEVLIADEPTSALDVSVQAAVLEMFAELQT
+RYEFACLFVSHDLAVVDMLAHKVLVLKDGRQVEQGPTGRVLHHPQAEYTQRLLAAAPVPD
+PDQQAERRRERRRLLASFGESAY
+>3_1231
+MSANDKKGRSMFGKKNQNDVTAGGQGSHAASSADLEARGAAVPGSSGAGGVPPGPATSAM
+GVVARHDDLGGEPVLAFRDVDVKFATEFGEVHAVKGVTFDVKPGEVVALVGESGSGKSVT
+SATAMGLLPGNADITGSVQLAGREVLTMTPGQLRDIRGDEVAMVFQEPMTALNPVLTVGD
+QLTEALELHGIAYGTEADKRAVELLTMVGIPDAATRLKQYPHQFSGGQRQRIVIAMAISC
+SPKVIIADEPTTALDVTVQAEILELLRSLKNKMNTGILLITHNMGVVADMADRVCVMLHG
+ELVEQGSVHQVLQHARHPYTQKLLSAVPRLGEPLEVAEPEPVTATQTQARYAIEAENLHL
+EYDHRGKKNRVVHDVSFQVAPGEILGLVGESGSGKSTIAKSVLGLLTIAEGSLRIQGHDL
+ATMPKAEQRALRKNIGVVFQDPAASLDPRFPIGDIITEPMVVHKVGDRRSRLARAEELLD
+AVRLPRSVVNRYPHELSGGQRQRISIARALTLDPQVLIADEPTSALDVSVQAAVLDMFAE
+LQQRYEFACLFVSHDLAVVDMLAHKVLVLKDGRQVEQGPTEEVLHRPKEEYTRRLLAAAP
+VPDPDQQAERRQERREFLASLGEGVY
+>4_1438
+MSANDKKGRSMFGKKNENDVTADGQGSHAASSADLEARGAAVPGSSGAGGVPPGPATSAM
+GVVARHDDLGGEPVLAFRDVDVKFATEFGEVHAVKGVTFDVKPGEVVALVGESGSGKSVT
+SATAMGLLPGNADVTGSVQLAGRDVLTMTPGQLRDIRGDEVAMVFQEPMTALNPVLTVGD
+QLTEALELHGIAYGTEADKRAVELLTMVGIPDAATRLKQYPHQFSGGQRQRIVIAMAISC
+SPKVIIADEPTTALDVTVQAEILELLRSLKNKMNTGILLITHNMGVVADMADRVCVMLHG
+ELVEQGSVHQVLQHARHPYTQKLLSAVPRLGEPLEVAEPEPVTATQTQARYAIEAENLHL
+EYDHRGKKNRVVHDVSFQVAPGEILGLVGESGSGKSTIAKSVLGLLTIAEGSLRIQGHDL
+ATMPKAEQRALRKNIGVVFQDPAASLDPRFPIGDIITEPMVVHKVGDRRSRLARAEELLD
+AVRLPRSVVNRYPHELSGGQRQRISIARALTLDPQVLIADEPTSALDVSVQAAVLDMFAE
+LQQRYEFACLFVSHDLAVVDMLAHKVLVLKDGRQVEQGPTEEVLHRPKEEYTRRLLAAAP
+VPDPDQQAERRQERREFLASLGEGVY
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000886.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000886.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ed8611b1c96d3e209ca5258166d940bac2ea4cc6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000886.fa
@@ -0,0 +1,15 @@
+>0_1339
+MTYVIALPCVDVKDKACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD
+TPEEWADYYKANVEFFDDLGSPGGAAKLGMIAKDHPIIAALPPQNADA
+>1_1508
+MTYVIALPCVDVKDKACIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIYYEDD
+TPEEWAEYYKANVEFFDDLGSPGGAAKLGMIAKDHPIISALPLQNADA
+>2_1231
+MTYVIALPCVDVKDKACIDECPVDCIYEGERSLYIHPDECVDCGACEPVCPVEAIYYEDD
+VPEEWADYYKANVEFFDDLGSPGGAAKLGQIAKDHPLISALPPQGEGA
+>3_1228
+MTYVIALPCVDVKDKACIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIYYEDD
+TPEEWAEYYKANVEFFDDLGSPGGAAKLGMIAKDHPIISALPLQNADA
+>4_1435
+MTYVIALPCVDVKDKACIDECPVDCIYEGERMLYIHPDECVDCGACEPVCPVEAIYYEDD
+TPDEWAEYYKANVEFFDDLGSPGGAAKLGMIAKDHPIISALPLQNADA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000891.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000891.fa
new file mode 100644
index 0000000000000000000000000000000000000000..912db0eb58a8d89afc493394f4ab05eb021cef3d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000891.fa
@@ -0,0 +1,30 @@
+>0_1344
+MSSQASVLFDAPGPLARRRILIANLVALAAVLALAVAVLMRMADADQLEARRWTAALDAN
+AWTNYYLPGLQFTVQAAAIAVLTSVVFGLVLGFLRLAPFAPVRGAAGLVVEFFRAVPVLI
+MMVFFYQVFAQVARTGVIAPADGPYYAVIVALTLYNGSVIAELVRSGVRSLPKGQREAAA
+AVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLQYARQLGSGQG
+NILQSLVVAALIFIVINFLLTWVATRLSRRLSSRTAGDAGAPTTPVVGAPTDKPA
+>1_1502
+MSAQASVLFDAPGPIARRRILLANLVSLAAVLVVAVLVLIQMNATGQLSGRRWLAAVDGN
+AWRNYYLPGLQFTLQSAGIAVVSSVVFGLVFGFLRLAPVGPVRWLAAVVVEFFRAVPVLV
+MMVFFYQLFAQVARSGAIQPQDGPYYAVIAALTLYNGSVIAELVRSGVRSLPRGQREAAA
+AVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLQYARQLGSGNG
+NILQSLVVAAMIFIVINFLLTWAATRLSRRLSSRTAGDASAPTTPRVGAPTDTAG
+>2_1236
+MSAQASVLFDAPGPATRRRILIVNLVALALVLAVAVVVGMALQDRGQLEPRRWLAALDAN
+AWTNYYLPGLQFTLQSAGIAVVTSVVFGLVFGFLRLAPVAPVRWLAAVVVEFLRAVPVLV
+MMVFFYQAFALAARGGAINAADSPYYAVIVGLTLYNGSVIAELVRSGVTGLPKGQREAAA
+AIGMTPNQSLRLVEVPQALVAMLPSLLSQFVVILKDSALGYLIGFFELLQYARQLGSGQG
+NILQTLVVAAVIFILINMLLTWLATLLSRRLSSRTSGRTKPHAGSTAVTIGKD
+>3_1222
+MSAQASVLFDAPGPIARRRILLANLVSLAAVLVVAVLVLIQMNATGQLSGRRWLAAVDGN
+AWRNYYLPGLQFTLQSAGIAVVSSVVFGLVFGFLRLAPVGPVRWLAAVVVEFFRAVPVLV
+MMVFFYQLFAQVARSGAIQPQDGPYYAVIAALTLYNGSVIAELVRSGVRSLPRGQREAAA
+AVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLHYARQLGSGNG
+NILQSLVVAAMIFIVINFLLTWAATRLSRRLSSRTAGDASAPTTPRVGAPTDTAG
+>4_1429
+MSAQASVLFDAPGPIARRRILLANLVSLAAVLVVAVLVLIQMNATGQLSGRRWLAAVDGN
+AWRNYYLPGLQFTLQSAGIAVVSSVVFGLVFGFLRLAPVGPVRWLAAVVVEFFRAVPVLV
+MMVFFYQLFAQVARSGAIQPQDGPYYAVIAALTLYNGSVIAELVRSGVRSLPRGQREAAA
+AVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLQYARQLGSGNG
+NILQSLVVAAMIFIVINFLLTWAATRLSRRLSSRTAGDASAPTTPRVGAPTDTAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000892.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000892.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9aae01deb09c3c80f75c1e5c53d84d512483e124
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000892.fa
@@ -0,0 +1,25 @@
+>0_1345
+MESISSLLADYGADIPLAFWTNIRLAFLATLGSFVLGVVLALFRISPVPSLRAIGTAYVN
+VVRNTPLTIVMLLGVLAVWGQLKITFSSDFTLNFFIYAVIALSLYHAAFMCEAIRSGVNT
+VPLGQAEAARAIGLGFLPAARHVILPQALRGAITPLGNTVIALTKNTTVAAAASVAEASG
+LMKRMIEFSPDVMVAIFLTFAIGFCLIVIPIGLLTTWASDKWAVAR
+>1_1501
+MESISSLLADYGADIPLAFWMNIRLAFLATLGSFVLGVVLALFRISPVPSLRALGAGYVN
+VVRNTPLTIIMLLGVLAVWGQLKISFSSDFTLNFFIYAVIALSLYHAAFMCEAIRSGVNT
+VPLGQAEAARSIGLGFLPAARHVILPQALRGAITPLGNTVIALTKNTTVAAAASVAEASG
+LMKRMIEFSPDVMVAIFLTFAIGFCLIVIPIGLLTTWASEKWAVAR
+>2_1237
+MESLSTLVEQYGAAVPQAFWMNIRLAALATLGAFVLGVLLALCRISPVPSLRAVGAGYVH
+IVRNTPLTIIMLIGVLAVWGQLKVTFAPDFKVNFFVYAVLALSLYHAAFMCEAIRSGVNT
+VPLGQAEAARAIGLGFLPAARLVILPQALRGAITPIGNTVIALTKNTTVAAAASVAEASG
+LMKTMIEFRPDAMVAIFLTIAIGFCLIVIPIGLLTTWASDKWAVSR
+>3_1221
+MESISSLLADYGADIPLAFWTNIRLAFLATLGSFVLGVVLALFRISPVPSLRALGAGYVN
+VVRNTPLTIIMLLGVLAVWGQLKISFSSDFTLNFFIYAVIALSLYHAAFMCEAIRSGVNT
+VPLGQAEAARSIGLGFLPAARHVILPQALRGAITPLGNTVIALTKNTTVAAAASVAEASG
+LMKRMIEFSPDLMVAIFLTFAIGFCLIVIPIGLLTTWASEKWAVAR
+>4_1428
+MESISSLLADYGADIPLAFWTNIRLAFLATLGSFVLGVVLALFRISPVPSLRALGAGYVN
+VVRNTPLTIIMLLGVLAVWGQLKISFSSDFTLNFFIYAVIALSLYHAAFMCEAIRSGVNT
+VPLGQAEAARSIGLGFLPAARHVILPQALRGAITPLGNTVIALTKNTTVAAAASVAEASG
+LMKRMIEFSPDLMVAIFLTFAIGFCLIVIPIGLLTTWASEKWAVAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000894.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000894.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3f5aec5d1d17cb4f855c0bc99eacc0168684ab95
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000894.fa
@@ -0,0 +1,30 @@
+>0_1347
+MTQITPEEPHGAHARDEAAPRRPRAAPGDDLIVLENVNKHFGDFHALKDIDLRIPRGQVA
+IVVGPSGSGKSTLCRTINRLETIDDDGGRILLDGQPLPAEGKQLAQLRAEVGMVFQSFNL
+FAHKSILENVTLGPIKVKGKRKADAERHAMELLERVGVAQQAKKMPAQLSGGQQQRVAIA
+RALAMEPKALLFDEPTSALDPEMVQEVLDVMVQLAEGGMTMVVVTHEMGFARKAGDRVVF
+MADGAILEDTDPESFFTAPQHERARDFLGKILAH
+>1_1499
+MTQITPEQPHGAHLPDEAGVRRRRGAAGDDLIVLEGVNKHFGDFHALRQIDLRIPRGQVA
+IVLGPSGSGKSTLCRTINRLETIDDDGGRILIDGRPLPTEGRQLAQLRAEIGMVFQSFNL
+FAHKSILENVTLGPIKVKGKRRADAERHAMELLERVGVAQQARKMPAQLSGGQQQRVAIA
+RALAMEPKALLFDEPTSALDPEMVQEVLDVMVQLAEGGMTMVVVTHEMGFARKAGDRVVF
+MADGAILEDTDPDTFFTNPRHERAQDFLGKILAH
+>2_1239
+MSEITSGTVHGSTAASGPAPAAASDALIRLEHVNKHFGEFHALKDIDLAIPRGQVAIVLG
+PSGSGKSTLCRTINRLETIDDDGGRILIDGRPLPSEGRELARLRAEVGMVFQSFNLFAHK
+SILENVTLGPIRVKGRKKAEAERHALELLERVGVAHQAKKMPAQLSGGQQQRVAIARALA
+MEPQALLFDEPTSALDPEMVQEVLDVMVGLAREGMTMVVVTHEMGFARKAGDRVVFMADG
+EILEDTDPESFFTRPQHPRAQEFLGKILVH
+>3_1219
+MTQITPEQPHGAHLPDEAGVRRRRGAAGDDLIVLEGVNKHFGDFHALRQIDLRIPRGQVA
+IVLGPSGSGKSTLCRTINRLETIDDDGGRILIDGRPLPTEGRQLAQLRAEIGMVFQSFNL
+FAHKSILENVTLGPIKVKGKRRADAERHAMELLERVGVAAQARKMPAQLSGGQQQRVAIA
+RALAMEPKALLFDEPTSALDPEMVQEVLDVMVQLAEGGMTMVVVTHEMGFARKAGDRVVF
+MADGAILEDTDPDTFFTNPRHERAQDFLGKILAH
+>4_1426
+MTQITPEQPHGAHLPDEAGVRRRRGAAGDDLIVLEGVNKHFGDFHALRQIDLRIPRGQVA
+IVLGPSGSGKSTLCRTINRLETIDDDGGRILVDGRPLPTEGRQLAQLRAEIGMVFQSFNL
+FAHKSILENVTLGPIKVKGKRRADAERHAMELLERVGVAQQARKMPAQLSGGQQQRVAIA
+RALAMEPKALLFDEPTSALDPEMVQEVLDVMVQLAEGGMTMVVVTHEMGFARKAGDRVVF
+MADGAILEDTDPDTFFTNPRHERAQDFLGKILAH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000895.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000895.fa
new file mode 100644
index 0000000000000000000000000000000000000000..be1aa0756696333d1b76a32446d2d8f8783ef067
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000895.fa
@@ -0,0 +1,30 @@
+>0_1348
+MDPDQHPRTDAVPAPERVRRGGQVLRGEAARRPTSDQLLLDARRPGDALPPAADLASTTS
+EAWRVLRIQAEFVEGFGTLAGIGPAVSVFGSARTPEASPEYALAREVGARLAEAGFTVIT
+GGGPGSMAAANRGAHEAGGESVGLGIELPFEAGLNEWVHVGVDFRYFFARKVMFLKYAQG
+FVVLPGGFGTLDELFEALTLVQTGTVTRFPVVLVDSTFWGPVVDWIRGTLVERGMISPGD
+PEIFHVVETAEEAVDCVQRVCGPGAP
+>1_1498
+MAPHEHPSGGDVAAKPQRVRRGGQVLRGDAAHTPTFDQLLLDGRRPGDAARPAADVASTT
+SEAWRVLRIQAEFVEGFGTLAGLGPAVSVFGSARTPEGSAEYALAHEVGTRLARAGYTVI
+TGGGPGTMAAANRGAHEAGGESVGLGIDLPFETGLNPWVHVGVDFRYFFVRKVMFLKYAQ
+GFIVLPGGLGTLDELFEALTLVQTGTVTRFPVVLVDRGFWSPLVDWIRGTLVERGMISPE
+DPDLFHLVDTAEEAVACVLRSAGRADA
+>2_1240
+MTDKPDPARADRVDRHRVHRGGQILRGDAAASPTFDQLLLDARRAPAGKTRTPSTSSTSD
+AWRVLRIQSEFVEGFGTLADLGPAISVFGSARTGEGTDEYALGVEIGRRLAEEGWAVITG
+GGPGAMESANRGADEAGGVSVGLGIELPFETGLNPWVGIGVDFRYFFARKVMFLRYAQGF
+VVLPGGFGTLDELFEALTLVQTGTVTRFPVVLVGTEFWGPLVDWIRGTLTARGMISPGDA
+DLITVVDTAEEAVAHVSATCGGARA
+>3_1218
+MAPDEHPLDGDVAEPEHVRRGGQVLRGEAERTPTFDQLLLDGRQPGDATQPAADIASTTS
+EAWRVLRIQAEFVEGFGTLAGLGPAVSVFGSARTPEGSAEYALAHEVGTRLARAGYTVIT
+GGGPGTMAAANRGAHEAGGESVGLGIELPFETGLNPWVHVGVDFRYFFVRKVMFLKYAQG
+FIVLPGGLGTLDELFEALTLVQTGTVTRFPVVLVDRGFWGPLVDWIRGTLVERGMISPED
+PDLVQLVDTAEEAVACVLRSAGRADA
+>4_1425
+MAPHEHPSGGDVAAKPQRVRRGGQVLRGEAARTPTFDQLLLDGRRPGDATQPAADIASTT
+SEAWRVLRIQAEFVEGFGTLAGLGPAVSVFGSARTPEGSAEYALAHEVGTRLARAGYTVI
+TGGGPGTMAAANRGAHEAGGESVGLGIELPFETGLNPWVHVGVDFRYFFVRKVMFLKYAQ
+GFIVLPGGLGTLDELFEALTLVQTGTVTRFPVVLVDRGFWGPLVDWIRGTLVERGMISPE
+DPDLVQLVDTAEEAVACVLRSAGRADA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000897.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000897.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bdeea4e9e7c32ae4c963ce862754b1aa0e187b91
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000897.fa
@@ -0,0 +1,10 @@
+>0_1350
+MAAMKPRTGDGPMEVTKEGRSLIMRVPIDGGGRLVLEINADEARELKECLEGVIQG
+>1_1496
+MAAMKPRTGDGPMEVTKEGRSLIMRVPIDGGGRLVLEINADEARELKECLEGVIQA
+>2_1242
+MAAMKPRTGDGPMEVTKEGRSLIMRVPIDGGGRLVLEINADEAKELQQCLEGVTQA
+>3_1216
+MAAMKPRTGDGPMEVTKEGRSLIMRVPIDGGGRLVLEINADEARELKECLEGVIQA
+>4_1423
+MAAMKPRTGDGPMEVTKEGRSLIMRVPIDGGGRLVLEINADEARELKECLEGVIQA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000899.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000899.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fde4e91d54451319c059bb99bfae2c377c539829
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000899.fa
@@ -0,0 +1,23 @@
+>0_1353
+MHGGLTRQDLVDMDPRSLFRRPAGAGSSAAPAASSGSAAPAAGASLATGAAVGGAAAALM
+ASGRAEEAVAEERPAVEPDPLELLGLAPAPYDVDAT
+>1_1493
+MFGINGSEFIILAVLAIVILGPEKLPEYTRAFTDWLRVMRDKAEGAKAQFKEETGTDFDE
+VDWRKYDPRQYDPRRIIRDALREPAGGSSTPASRAAQATGISAEDVHGGLTRQDLTDMDP
+RTLFRRPAGAGSTAAAESGAAAAQTRSTEPAAGAAAVGGAAAALMASGRAEALTEERPAA
+VETEPDPLELLGLAPAPFDVDAT
+>2_1245
+MFGINGSELIVLIVLAFVVLGPEKLPEYTRALAQGIRKTRDMAEGAKTQFKEETGTDFDS
+VDWRRYDPRQYDPRRIIRDALREPADGSTAAARAQELTGVAAEDLQGGLSAQDLRDMDPR
+SLFRRPSGDGSTAAPAGGGASAPSDAPTPEDVPSAAVPVAAASPSPAGAAAAGVAAALLA
+SGRAEEVLTDPAPLQHLGTDPDPLDLLGKAPAPFDVDAT
+>3_1213
+MFGINGSEFIILAVLAIVILGPEKLPEYTRAFTDWLRVMRDKAEGAKAQFKEETGTDFDE
+VDWRKYDPRQYDPRRIIRDALREPAGGSSTPASRAAQATGISAEDVHGGLTRQDLTDMDP
+RTLFRRPAGAGSTAAAESGAAAQTRSTEPAAGAAAVGGAAAALMASGRAEALTEERPAAV
+ETEPDPLELLGLAPAPFDVDAT
+>4_1420
+MFGINGGEFIILAVLAIVILGPEKLPEYTRAFTDWLRVMRDKAEGAKAQFKEETGTDFDE
+VDWRKYDPRQYDPRRIIRDALREPAGGSSTPASRAAQATGVSAEDVHGGLTRQDLADMDP
+RTLFRRPAGAGSTAAAESGAAAQTRSTAPAAGAAAVGGAAAALMASGRAEALAEERPAAV
+ETAPDPLELLGLAPAPFDVDAT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000906.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000906.fa
new file mode 100644
index 0000000000000000000000000000000000000000..60432d0ea9204d7358af3b940ed0bb51eb179927
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000906.fa
@@ -0,0 +1,30 @@
+>0_1360
+MSRYDLHTHSVESDGTEPPADVVRAAARAGLDGLALTDHDTTAGWEAAAEAALAEGIAFV
+PGMEMSCMAADGTSVHVLSYLHDPADPSLLREIGTARSARLTRAQEMVHRLARDYPITWE
+LVQEHAAEGATIGRPHLADTLVTLGVVEDRSAAFAHILTGRSKYYVPHYAPDPAIAVELI
+RSAGGVPVFAHPRAVTRGRVVGVEVIEEMIDAGLAGLEADHRDNPEEERSWLREVAARHD
+LFVTGSSDYHGTGKPNLLGEFSTGEDVLAEIERQGTGAAVVRG
+>1_1486
+MAAMARYDLHTHSTESDGTEPPADVVRAAARAGLDGLALTDHDTTAGWAEAAQAARETGL
+TLVPGMEMSCTSADGVSVHVLSYLHDPEDPALLREVGRARDARLTRAQEMVRRLGADFSI
+TWELVQEHAAENATIGRPHLADALVTIGAVPDRSAAFREILAGRSKYYVPHFAPDPAEAV
+ALIRAAGGVPVFAHPRARMRGRVVGDEVFEQMAEAGLAGVEVEHRDNPAEERTWLRAFAD
+RHGLFVTGSSDYHGTGKPNPIGEHTTGAEVLAEIERQGTGTAIIRG
+>2_1252
+MSTARYDLHTHSTESDGTEPAADVVHAAALAGLDGLALTDHDTTAGWAAAADAARETGLL
+LVPGMEMSCMAADGTSVHLLSYLHDPADPSLLAELGASRDARLTRAQSMTDRLAEDFPIT
+WDLVREHASENATIGRPHIADALVTIGAVPDRSAAFSSILRGGSKYYVPHYAVDPVEAVR
+LVRAAGGVPVFAHPRARLRGRIVGDDVLEAMIEAGLAGLEADHRDNPEQERTWLRETATR
+HGLFVTGSSDYHGAGKPNLIGEFTTGPEVLAEIEHQGTGAAVVRG
+>3_1206
+MAAMARYDLHTHSTESDGTEPPADVVRAAARAGLDGLALTDHDTTAGWAEAAHAARETGL
+TLVPGMEMSCTSADGVSVHVLSYLHDPEDPALLREVGLARDARLIRAQEMVRRLGADFPI
+TWELVQEHAAENATIGRPHLADALVTIGAVPDRSAAFREILAGRSKYYVPHFAPDPAEAV
+ALIRAAGGVPVFAHPRARMRGRVVGDEVFEQMAEAGLAGVEVEHRDNPAEERTWLRAFAD
+RHGLFVTGSSDYHGTGKPNPIGEHTTGAEVLAEIERQGTGTAIIRG
+>4_1413
+MAAMARYDLHTHSTESDGTEPPADVVRAAARAGLDGLALTDHDTTAGWAEAAHAARETGL
+TLVPGMEMSCTSADGVSVHVLSYLHDPEDPALLREVGLARDARLIRAQEMVRRLGADFPI
+TWELVQEHAAENATIGRPHLADALVTIGAVPDRSAAFREILAGRSKYYVPHFAPDPAEAV
+ALIRAAGGVPVFAHPRARMRGRVVGDEVFEQMAEAGLAGVEVEHRDNPAEERTWLRAFAD
+RHGLFVTGSSDYHGTGKPNPIGEHTTGAEVLAEIERQGTGTAIIRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000908.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000908.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0428bbfe867ee3eb6c7284aef4412123a7192b46
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000908.fa
@@ -0,0 +1,15 @@
+>0_1363
+MEIRIGVQHVGREVVIESEQPAEEVRSLVDAAVADGSTLVLADAKGRQVVVPGDRIGFVE
+INAKKSGPLGFAAS
+>1_1483
+MEIRIGVQHVGREVVIDSEQSADEVRSLVDAAVSDGTPLVLADAKGRQVVVPGDRIGFVE
+IGAKKSGPLGFAAS
+>2_1255
+MEIRIGVQHVGREVVLESDHTAQEVRALVDAALADGTTLALTDTKGRQVIVPADRIGFVE
+IGAKKSAPLGFAAV
+>3_1203
+MEIRIGVQHVGREVVIDSEQSADEVRSLVDAAVADGTPLVLADAKGRQVVVPGDRIGFVE
+IGAKKSGPLGFAAS
+>4_1410
+MEIRIGVQHVGREVVIDSEQSADEVRSLVDAAVADGTPLVLTDAKGRQVVVPGDRIGFVE
+IGAKKSGPLGFAAS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000909.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000909.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4be51afad1ca64123a6b39a89255db279c440fb9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000909.fa
@@ -0,0 +1,24 @@
+>0_1364
+MFAAEGYAGASMDQIAERAEVSKPVLYQHFPGKHELFLELLDAEVADLQERLGAAMDTRR
+GRDNRERVRATVAAFFEYMGAPERTHRLVFDSGADQDPEVRSRSEAVHRLLSSEITRTIS
+ADTSVGEAEAEVLSRGLVGLLLGAARHWADRLDVQARPPAAEMARTVDALVWRGLATLPT
+DDDAL
+>1_1482
+MTDHPAATAPDEPGRGRRLPRQERRRQLLDCARAVFAAERYAGASMEQIAERAEVSKPVL
+YQHFPSKHELFLELLDAEVASLRALLEAAMDTRRDNRERVRATVAAVFEYMASPERTHRL
+IFDSGIDGDPEVRTRSEAVHRLLSSEVARTIRADTTVAEAEAEVLSRGLVGYLLGAARHW
+ADRLDADARPAAAEMARTVDALVWRGLASLPSADDAPR
+>2_1256
+MAAPARLPRAERRGQLLEVARVVFAAQGYVGTSMDEITERADVSKPVVYQHFGGKQELFL
+ELLDAEVERLRALIVEGTASTQDNRTRARSAVHAVFRYMDSPTSAHRREGGRGRGERAVA
+GPGRDRGPRRRRVLSRAALRPGVNARRPPGARPRLP
+>3_1202
+MTAHPAATAPDEPGRGRRLPRHERRRQLLDCARAVFAAERYAGASMEQIAERAEVSKPVL
+YQHFPSKHELFLELLDAEVASLRALLEAAMDTRRDNRERVRATVAAVFEYMASPERTHRL
+IFDSGIDADPEVRTRSEAVHRLLSSEVARTIRADTTVAEAEAEVLSRGLVGYLLGAARHW
+ADRLDADARPAAAEMARTVDALVWRGLASLPSADDAPR
+>4_1409
+MTAHPAATAPDEPGRGRRLPRHKRRRQLLDCARAVFAAERYAGASMEQIAERAEVSKPVL
+YQHFPSKHELFLELLDAEVASLRALLEAAMDTRRGNRARVRATVAAVFEYMASPERTHRL
+IFDSGIDGDPEVRTRSEAVHRLLSSEVARTIRADTTVAEAEAEVLSRGLVGYLLGAARHW
+ADRLDADARPAAAEMARTVDDLIWRGLTSLPSADDAPR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000911.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000911.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b90ecce8f24fd1e3697991e587dd0c228801d35d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000911.fa
@@ -0,0 +1,40 @@
+>0_1366
+MSDLSQTSEIRAGAPALPADHPLRTQDPARSTAASPLVRALRGQRPDRHPVWFMRQAGRS
+LPEYREARAGIGMLESCLMPDLVREITLQPVRRHDVDAAIFFSDIVVPLRLAGVDVEIQP
+GVGPVLGRAVRTAEDVAALPVLEDSALDVIREAVSSTVAELGPRPLIGFAGAPFTLAAYM
+VEGRPSRDHFGPRRMMHGDPEAWAALAGWAATVSGQFLRAQLEAGASAAQLFDSWAGSLA
+AEDYLEHVQPHSRAALAHVDDLAGPGVDGGAPLLHFGTGTGEFLHHLRDAGASAVGVDHR
+LTLSEAHRRLSERPGPDGRTVVPLQGNIDPALLAAPWPVVEAHVRDVVASGAAAPGHVVN
+LAHGVPPETDPTVLTRVVELIHSLPVPEREGQDPAPPAGAAAGEGRA
+>1_1480
+MSALSQTPETPAAVPALPAEHPLRTEDPSRSTVASPLLRALRGQRPDRHPVWFMRQAGRS
+LPEYRRVREGIGMLDSCLMPDLVREITMQPVRRHDVDAAIFFSDIVVPLRLAGVDVEIQP
+GVGPVLGQAVRTADDVAALPVLEDAALDVIREAVAATVAELGPRPLIGFAGAPFTLAAYM
+VEGRPSRDHFGPRRMMHADPETWAALAGWAATVSGQFLRAQLESGASAAQLFDSWAGSLS
+ADDYLEHVQPHSTAALAHVADLAGPGVPDGAPLLHFGTGTGEFLHHMRDAGATAVGVDHR
+LTLAEAHRRLSANPGPDGRGAVPLQGNIDPALLAAPWEVLEAHVRDVVASGAVAPGHVVN
+LAHGVPPETDAAVLTRVVELIHSLPVPEREGQDPAPGAETAEREERA
+>2_1258
+MSAMTTPPGLPAEHPLSTADPARSTADAPLVCALRGRRPHRHPVWFMRQAGRSLPEYRKA
+REGVGMLESCLRPELAAEITLQPVRRHDVDAAIFFSDIVVPLKLAGVGVEIVPGVGPVLD
+HPVRTAEDAAALPELEDSALDVIREAVSRTVAELGPTPLIGFAGAPFTLAAYMVEGRPSR
+DHLGPRRMMHGDPQTWAALAAWAATVSGQFLRAQLEAGASAAQLFDSWAGSLSAADYRKH
+VQPHSAAALSAVSDLAGPGVEGGAPLLHFGTGTGEFLDLMRDAGASAVGVDHRITLAEAH
+RRLSSRPGPDGRAAVPLQGNIDPALLGAPWEVLEAHVREVVASGAAAPGHVVNLAHGVPP
+ETDPEVLTRVVELIHSIPVADGAEK
+>3_1200
+MSALSQTPETPAAVPALPAEHPLRTEDPSRSTVASPLLRALRGQRPDRHPVWFMRQAGRS
+LPEYRRVREGIGMLDSCLMPDLVREITMQPVRRHDVDAAIFFSDIVVPLRLAGVDVEIQP
+GVGPVLGQAVRTADDVAALPVLEDAALDVIREAVAATVAELGPRPLIGFAGAPFTLAAYM
+VEGRPSRDHFGPRRMMHADPETWAALAGWAATVSGQFLRAQLESGASAAQLFDSWAGSLS
+ADDYLEHVQPHSTAALAHVADLAGPGVPDGAPLLHFGTGTGEFLHHMRDAGATAVGVDHR
+LTLAEAHRRLSANPGPDGRGAVPLQGNIDPALLAAPWEVLEAHVRDVVASGAVAPGHVVN
+LAHGVPPETDAAVLTRVVELIHSLPVPEREGQDPAPGVETAEREERA
+>4_1407
+MSALSQTPETPAAVPALPAEHPLRTEDPSRSTVASPLLRALRGQRPDRHPVWFMRQAGRS
+LPEYRRVREGIGMLDSCLMPDLVREITMQPVRRHDVDAAIFFSDIVVPLRLAGVDVEIQP
+GVGPVLGQAVRTADDVAALPVLEDAALDVIREAVAATVAELGPRPLIGFAGAPFTLAAYM
+VEGRPSRDHFGPRRMMHADPETWAALAGWAATVSGQFLRAQLESGASAAQLFDSWAGSLS
+ADDYLEHVQPHSTAALAHVADLAGPGVPDGAPLLHFGTGTGEFLHHMRDAGATAVGVDHR
+LTLAEAHRRLSANPGPDGRGAVPLQGNIDPALLAAPWEVLEAHVRDVVASGAVAPGHVVN
+LAHGVPPETDAAVLTRVVELIHSLPVPEREGQDPAPGAETAEREERA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000916.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000916.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c117c3a6f4d4e33a0b76f7c068d5942d11ee42d7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000916.fa
@@ -0,0 +1,30 @@
+>0_1371
+MRVLLTRQPAQAGDLEAGLAGAEVAGRRLRVGFLPLTDFALPDDDGPLRALLADWAGADG
+DAAGPGRSDGSRWLVLTSPNTVRALRAVGWDGHVPAGARIAVTGPGTARVLTEAGCDAAP
+WLPPEDRSAEGLIAGLAALHPRGGRAWLPQSDRARPRLADGLRAAGWDVRTGLAYRTVPY
+PAQAGRRLLDAAADEGRGDVVTPARLAAVAAGTAVVLTSSSAAEEFLAAGLTPLVGERVR
+LVAIGAPTRDTCARRGLPLLGTAPTPDAAGVLAVLRAAA
+>1_1475
+MRVLLTRQPAQAGDLEAGLAGTEVAGRRLRVGFLPLTDFALPDDDGPLRALLADWAGADG
+DAAGPVRSDGSRWLVVTSPNTVRALRAVGWDGHVPAGARIAVTGPGTARVLTEAGCDAAP
+WLPPEDRSAEGLIAGLAALHPRGARAWLPQSDRARSRLADGLRAAGWDVRTGLAYRTVPY
+PAQAGRRLLDGAADEGRGDVVTPARLAAVAAGTAVVLTSSSAAEEFVAAGLTPLVGERVR
+LVAIGAPTRDTCARRGLPLLGTAPTPDAAGVLAVLRAAA
+>2_1263
+MDGRPLVLTRQPAQAGTLEADLAAAGRRVAFCPLTDFELPPTPGGLRAVVEAVVGGRCAW
+LLVTSPNAVRALQAAGWTGAVGAGVRVAVTGAGTARVLADAGCAVEPWMPESASAAGILA
+EFPAAPAETGDGARRVLLPQSALATAELEEALTRRGWAVDRVEAYRTVPYPADAARRLLT
+EEPGDAGTVVPVAELAGADVVLTSPSAARALAVHPALDDPELRRTWRLVALGAPTAREAR
+RLGLRLTGQAATPDATGILAALARPVG
+>3_1195
+MRVLLTRQPAQAGDLEAGLAGTEVAGRRLRVGFLPLTDFALPDDDGPLRALLADWAGADG
+DAAGPVRSDGSRWLVVTSPNTVRALRAVGWDGHVPAGARIAVTGPGTARVLTEAGCDAAP
+WLPPEDRSAEGLIAGLAALHPRGARAWLPQSDRARSRLADGLRAAGWDVRTGLAYRTVPY
+PAQAGRRLLDGAADEGRGDVVTPARLAEVAAGTAVVLTSSSAAEEFVAAGLTPLVGERVR
+LVAIGAPTRDTCARRGLPLLGTAPTPDAAGVLAVLRAAA
+>4_1402
+MRVLLTRQPAQAGDLEAGLAGAEVAGRRLRVGFLPLTDFALPDDDGPLRALLADWAGADG
+DAVGPVRSDGPRWLVVTSPNTVRALRAVGWGGHVPAGARIAVTGPGTARVLTEAGCDAAP
+WLPPEDRSAEGLIAGLAALHPRGARAWLPQSDRARPRLADGLRAAGWDVRTGLAYRTVPY
+PAQAGRRLLDGAADEGRGDVVTPARLAAVAAGTAVVLTSSSAAEEFVAAGLTPLVGKRVR
+LVAIGAPTRDTCARRGLPLLGTAPTPDAAGVLAVLRGAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000918.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000918.fa
new file mode 100644
index 0000000000000000000000000000000000000000..485c42420d8cf1209fe1c10d60e9b672286152be
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000918.fa
@@ -0,0 +1,38 @@
+>0_1373
+MPEPTPASLRIAVLMDSDNVSPKFAPLILEELATYGTPTIKRAYGDWTTTNLNGWKKALN
+HHAIQPVQQFAYTVGKNSSDSALIIDAMDLLWMGNVDAFALVSSDSDFTRLATRLREGGK
+RVIGLGARKTPASLRNAVDQFIYLELLGTATDHDVDDDETGEDALAKEENAKASEGSGRS
+GSRRGGRGRGRGSKTTDATDTPDADVADAEAPAADAAPAGDAATGRDGKGTEAKSGAGRR
+GRRASSSDVTEDPTPPEVPVEAEPEHDEADAAPRIDLQAALTKAVNATSTDDGWATLSLI
+GQHLSRTHVDFDPRDFGHSKLSTLVEDQPYLRTRTEGRTMEVSLVRRRSRRAEG
+>1_1473
+MPEPTPASLRIAVLMDSDNVSPKFAPLILEELATYGTPTIKRAYGDWTTTNLNGWKKALN
+HHAIQPVQQFAYTVGKNSSDSALIIDAMDLLWMGNVDAFALVSSDSDFTRLATRLREGGK
+RVIGLGARKTPASLRNAVDQFIYLELLGTATDHDVDDDETGEDAPAKEENAKASEGSGRS
+GSRRGGRGRGRGAKTTDATDTPEATDADAEAPIADEAPAADEAPAADEAPAGDAAAGKDG
+KAAEAKSGAGRRGRRASSSDVTEDPTPPEVPVEAEPEHDEADAAPRIDLQAALTKAVNAT
+STDDGWATLSLIGQHLSRTHVDFDPRDFGHSKLSTLVEDQPYLRTRTEGRTMEVSLVRRR
+SRRAEG
+>2_1265
+MSEPTPASLRIAVLLDCDNVSPKYAGLILEELATYGTPTIKRAYGDWTTTNLNGWKKALN
+ELAIQPVQQFAYTIGKNSSDSALIIDAMDLLWMGNVDAFALVSSDSDFTRLATRLRESGK
+RVIGLGARKTPASLRNAVDQFIYLELLGTHTEGVDDDEPAPSLQAEPSPKDEREAKEGPA
+TGNRRGSRGRGAKAKPAADVASEQPAEAEPAPVVEPAPDVTPAPESDEAAPQRAVRGRGR
+GAGRGSVLVDVDSAEVITAEDPTPPDVRADADDDAEPASRINLQSALVKAVNATSGDDGW
+ASLSLIGQHMSRTHVDFDPRDFGHAKLSTLVADQPYLETRTEGRSMEVTLKQRRRRAQG
+>3_1193
+MPEPTPASLRIAVLMDSDNVSPKFAPLILEELATYGTPTIKRAYGDWTTTNLNGWKKALN
+HHAIQPVQQFAYTVGKNSSDSALIIDAMDLLWMGNVDAFALVSSDSDFTRLATRLREGGK
+RVIGLGARKTPASLRNAVDQFIYLELLGTATDHDVDDDETGEDAPAKEENAKASEGSGRS
+GSRRGGRGRGRGAKTTDATDTPEATDADAEAPAVDEAPAADEAPAADAAPAGDAAPAGDA
+AAGKDGKAAEAKSGAGRRGRRASSSDVTEDPTPPEVPVEAEPEHDEADAAPRIDLQAALT
+KAVNATSTDDGWATLSLIGQHLSRTHVDFDPRDFGHSKLSTLVEDQPYLRTRTEGRTMEV
+SLVRRRSRRAEG
+>4_1400
+MPEPTPASLRIAVLMDSDNVSPKFAPLILEELATYGTPTIKRAYGDWTTTNLNGWKKALN
+HHAIQPVQQFAYTVGKNSSDSALIIDAMDLLWMGNVDAFALVSSDSDFTRLATRLREGGK
+RVIGLGARKTPASLRNAVDQFIYLELLGTATDHDVDDDETGEDAPAKEENAKASEGSGRS
+GSRRGGRGRGRGAKTTDATDTPEATDADAEAPIADEAPAADEAPAADEAPAGDAAAGKDG
+KAAEAKSGAGRRGRRASSSDVTEDPTPPEVPVEAEPEHDEADAAPRIDLQAALTKAVNAT
+STDDGWATLSLIGQHLSRTHVDFDPRDFGHSKLSTLVEDQPYLRTRTEGRTMEVSLVRRR
+SRRAEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000921.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000921.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e477f29daf5dc2266385675070ea4f912ad46f20
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000921.fa
@@ -0,0 +1,45 @@
+>0_1376
+MTTSTRTTNAAAFAAAQAVIPGGVDSPVRAFGSVGGTPRFMAGARGPYLTDVEGREYVDL
+VCSWGPMLLGHGHPEVTDAVHAAVDRGLGFGTSTLEETALAELIAAKVPVERVRFVSTGT
+EATMTALRLARGVTGRNLIVKFAGCYHGHSDGLLAAAGSGVATAALPGSAGVTEAAASET
+LVVDYNDRDALEAVFAEHGERIAALITEAVPCNMGVVEPAEGFNAFLREITARHGALLIW
+DEVLTGFRATATGGWGLSGQVDGWTPDIWCFGKVIGGGMPAAALAGSAEIMNHLAPLGPV
+YQAGTLSGNPVAMAAGHATLSRADDAVYAAVQRASDAVREGLVAALDAEGVDHSIQRAGT
+LFSVAFGTSGTGVRDYRDAQAQEAFRYAPFFQSMLESGVYLPPSVFEAWFVSAAHDDAAV
+QRVLDALPAAAKAAAAATPQG
+>1_1470
+MTASQPTTNAAAFAAAQAVIPGGVDSPVRAFGSVGGTPRFMAGARGPYLTDVEGNEYVDL
+VCSWGPMLLGHQHPEVVEAVHAAVDRGLGFGTSTLEETALAELIASKVPVERVRFVSTGT
+EATMTALRLARGVTGRNLIVKFAGCYHGHSDGLLAAAGSGVATAALPGSAGVTEAAASET
+LVVDYNDRAAVEAVFAEHGERIAALITEAVPCNMGVVEPAEGFNAFLREITRRHGALLIW
+DEVLTGFRATATGGWGLSGQPEGWTPDVWCFGKVIGGGMPAAALGGSAEIMDHLAPLGPV
+YQAGTLSGNPVAMAAGHATLSRADEAVYAAVTRASDAVREGLVAALDAEGLDHSIQRAGT
+LFSLAFGTSGTGVRDYRDAQGQEVFRYAPFFQSLLASGVYLPPSVFEAWFVSAAHDDAAV
+TRVLDALPAAAKAAAAATPQG
+>2_1276
+MTASQPTTNAAAFAAAQAVIPGGVDSPVRAFGSVGGTPRFMAGARGPYLTDVEGTEYVDL
+VCSWGPMLLGHRHPEVLEAVHAAVDRGLGFGTSTLEETALAELIASRVPVERVRFVSTGT
+EATMTALRLARGVTGRNLIVKFAGCYHGHSDGLLAAAGSGVATAALPGSAGVTEAAASET
+LVVDYNDRAALEAVFAEHGERIAAVITEAVPCNMGVVEPAEGYNAFLREITAQHGALLIW
+DEVLTGFRATATGGWGLSGQPEGWTPDIWCFGKVIGGGMPAAALAGSAEIMNHLAPLGPV
+YQAGTLSGNPVAMAAGHATLSRADDAVYAAVQRASDAVREGLAAALTAEGVDHSIQRAGT
+LFSVAFGTSEHGVRDYRDAQGQDVFRYAPFFQTMLESGVYLPPSVFEAWFVSAAHDDAAV
+ERVLAALPTAAKAAAAATPQG
+>3_1189
+MTASQPTTNAAAFAAAQAVIPGGVDSPVRAFGSVGGTPRFMAGARGPYLTDVEGNEYVDL
+VCSWGPMLLGHQHPEVVEAVHAAVDRGLGFGTSTLEETALAELIASKVPVERVRFVSTGT
+EATMTALRLARGVTGRNLIVKFAGCYHGHSDGLLAAAGSGVATAALPGSAGVTEAAASET
+LVVDYNDRAAVEAVFAEHGERIAALITEAVPCNMGVVEPAEGFNAFLREITRRHGALLIW
+DEVLTGFRATATGGWGLSGQPEGWTPDIWCFGKVIGGGMPAAALGGSAEIMDHLAPLGPV
+YQAGTLSGNPVAMAAGHATLSRADEAVYAAVTRASDAVREGLVAALDAEGVDHSIQRAGT
+LFSLAFGTSGTGVRDYRDAQGQEVFRYAPFFQSMLASGVYLPPSVFEAWFVSAAHDDAAV
+TRVLDALPAAAKAAAAATPQG
+>4_1397
+MTASQPTTNAAAFAAAQAVIPGGVDSPVRAFGSVGGTPRFMAGARGPYLTDVEGNEYVDL
+VCSWGPMLLGHQHPEVVEAVHAAVDRGLGFGTSTLEETALAELIASKVPVERVRFVSTGT
+EATMTALRLARGVTGRNLIVKFAGCYHGHSDGLLAAAGSGVATAALPGSAGVTEAAASET
+LVVDYNDRAAVEAVFAEHGERIAALITEAVPCNMGVVEPAEGFNAFLREITRRHGALLIW
+DEVLTGFRATATGGWGLSGQPEGWTPDIWCFGKVIGGGMPAAALGGSAEIMDHLAPLGPV
+YQAGTLSGNPVAMAAGHATLSRADEAVYAAVTRASDAVREGLVAALDAEGVDHSIQRAGT
+LFSLAFGTSGTGVRDYRDAQGQEVFRYAPFFQSMLASGVYLPPSVFEAWFVSAAHDDAAV
+TRVLDALPAAAKAAAAATPQG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000922.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000922.fa
new file mode 100644
index 0000000000000000000000000000000000000000..932c59e71fb3e0383f875a50a30c862f7ecc365c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000922.fa
@@ -0,0 +1,25 @@
+>0_1377
+MSPVNWHQSIRAGFDLETTGRDPRSALIVTATLVMVDAQGRATASAEWLLDPGVPIPAEA
+AEVHGVTTERAQAEGMPAAQGVTEITETLRDLFAAGIPVVAFNGVYDFTVMDREARRHGL
+APVEARPVIDPFVLDKQVDRFRKGKRTLSAVSEHYGVTLENAHTSAADALAAVQVADALA
+ERHEQLRVDPAELHERQVRWKAEQAESFEEYLRRKDPQATVSRDWPVESGR
+>1_1469
+MTWHESIRAGFDLETTGRDPRTALIVTATLVMVDEQGRAASSAEWLVDPGVPIPAEAAEV
+HGVTTERAQAEGMPAAQGVTEITETLRDLFAAGIPVVAFNGVYDFTVMDREARHHGLTPL
+EARPVIDPFVLDKQVDRFRKGKRTLSAVSEHYGVTLENAHTSAADALAAVQVADALAARY
+EQLRVAPVDLHERQVRWKAEQAESFEQYLRRKDPQATVSRHWPVEAER
+>2_1277
+MSWNEQIRAGFDLETTGRDPRQARIVTATIVMVDAAGKAVSSAEWLLDPGVPIPEEAAAV
+HGVTTERARAEGLEARRGVSEITETLRDLFAAGIPVVAFNGVYDFTVMDREARRHGVAPL
+EPRPVVDPYVVDKQVDRFRKGKRTLGAVSEHYDVVLEDAHTSAADALAAVQVMDELVRRH
+PKADLPLDELHAAQARWKAEQAESFEEYLRRKDPQATVSRAWPVEPDV
+>3_1188
+MTWHESIRAGFDLETTGRDPRTALIVTATLVMVDEQGRAASSAEWLVDPGVPIPAEAAEV
+HGVTTERAQAEGMPAAQGVTEITETLRDLFAAGIPVVAFNGVYDFTVMDREARRHGLTPL
+EARPVIDPFVLDKQVDRFRKGKRTLSAVSEHYGVTLENAHTSAADALAAVQVADALAAQY
+EQLRVAPADLHERQVRWKAEQAESFEQYLRRKDPQATVSRHWPVDAER
+>4_1396
+MTWHESIRAGFDLETTGRDPRTALIVTATLVMVDEHGRAASSAEWLVDPGVPIPAEAAEV
+HGVTTERAQAEGMPAAQGVTEITETLRDLFAAGIPVVAFNGVYDFTVMDREARRHGLTPL
+EARPVIDPFVLDKQVDRFRKGKRTLSAVSEHYGVTLENAHTSAADALAAVQVADALAARY
+EQLRVAPTDLHERQVRWKAEQAESFEQYLRRKDPQATVSRHWPVEAER
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000924.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000924.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a861bb6638222236152f45563d4dc58f2ae23207
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000924.fa
@@ -0,0 +1,104 @@
+>0_1379
+MTWQADEDLLLDDDAAAPERAARLVSPAAAPAERVALTLEQEAVAAMGPGHGAVLVLGAP
+GTGRTTVAVEYAARRLESGTDPESLLLLAPSRDAAARLRDALTRRLAAAGRGTRAVTPVR
+TWTSYAFDLLRRARVTGPLSHLPVAPRLLTGAEQDTVIAELLEGYAAGHAEAPRWPQDVA
+AAVETRGFRREVRELVDRMSEFGVEPGRLQELGAAHARPVWEAAAVLLQDYRDRIDLGLA
+EAFDAAGLISAAVRVLTERHPEDPERDAAALAFAAAERERLRTLVVEDLQEATPAVHDLL
+AVLGRGRDVLLTAGPDTAVEGFRGARPDLVSRYPQALDPDPVPGAPEAPSSGERTRVLTQ
+GHRMAPEVQDAFLRVARRVRQRTAAVEHTRTQTAPADGPGTVRGHVVPTRAHEDQLVLER
+VLRVHHEDEVPLDRILVVARSGSRVAALARHLEAEGVPVLRDAAGLVLKEEPAVAPLLTL
+LAAAGVLADDPEAGVEDVLDPDEVVALLTGRYGMAGALHVRRLRQDLLAAERGRGGRRSS
+DALLAAALLDPALAGPEHERHRALRRVHWMLRAGIEAARAPSASPEAVLWALWSASGRAE
+RWRSTALRPAEHANDRRESRRADADLDAVVALFKVAERFVDQFPGAAPEAFAVYMESQDL
+PVDTLARRAEAGDAVHVRTPAAAAGQEWDTVIVVGLQEGVWPNTRLRGQLLGATDLADLL
+TLPEGGAWPTDHRTRLREVRQDELRMLAAAVSRARRQVVVTAVRSAEDAPSDFLDLVDPP
+ERLPAPARDEAGVRRLTAVPDPITAPALAGTLRRRLEEDPGQGPAAAGLAALARDGVGVA
+DPRRWWGLLPLSTDAGLADPAQDVVALSPSRVETALHNPLNWLLYHVGATAGGTLAQSVG
+TLVHSVAEHHPEGVPEQVRAELERRLPELGLPEGWITEIEHERARALVDAYIGYWSIARD
+AGRRPVAQEVRLLAELTWGGTTVRITGVVDRLEADAEGRPFIADLKTGRSAPTGPEMARQ
+PQLAAYQVAVLAGGLAQIRDDPDADPALRAALADLARPAAPAGAALVQLGAGTQKTKVQE
+QPALGPEDDWALEQVFTAARRTVGPRFLAIHEAGGRRCALPSVCPLCSEGRQVTEWPR
+>1_1467
+MTREHGVDPFDDDAAAPERAARLVRTAAAPEDRITLTDEQEAIASLAPGHNAVLVLGAPG
+TGRTTVAVEYAARRIEAGLDPESLLLLAPSRDAAARLRDALTRRLAAAGRGTRAVTPVRT
+WSSYAFDLLRRARVTGPLRHLEVAPRLLTGAEQDTVIAELLEGYAAGLAAAPDWPADVAP
+AVEARGFRREVRELVDRMSELGLEPGRLQELGTAHGRPEWEAAAVLLQDYRDRIDLGMAE
+AFDAAGLLSAAVRVLTERHPEDPERDAAAQAFVAAERDRLAVLVVEDLHEATPAVHDLLT
+VLGRGRDVLLTASPDTTVEGFRGARPDLLARYPGVLDPDPVPGAAPPASPDGRVRVLTRG
+HRMRAEVQDAYLRVARRVRQRTAGVERTRTETVPADGDGAVRAHVVPTRAHEDQLVLERV
+LRVHHEDGVPLDRILVVARSGSRVAALARHLEAEGVPVLRDAAGLVLKEEPAVAPLLTLV
+DAAGALAEDPEARVEDVLDPDEVVGLLTGRYGMASALHVRRLRQDLLAAERGRGGRRTSD
+ALLAAALLDPSLAGPEHERHRALRRVHWMLRDGLEAARAPSASPETVLWALWSASGRAER
+WRSLALRPAEHANDRRESRRADADLDAVVALFKVAERFVDQFPGASPESFAVYMESQDLP
+VDTLARRAESGDAVHVRTPAAAAGQEWDTVIVVGLQEGVWPNTRLRGQLLGATDLVDLVT
+LPADAPWPTDHRTRLREVRQDELRMLAAAVSRARRQVVVTAVRSPDEGPSDFLDLVDPPE
+RLPAEARDAAGVRRLTAVPDPITAPALVGRLRRVLEAGDEADAADGATPRAAAAAGLAVL
+AADGVGVADPRRWWGLLPLSTEAALVDPEREVVALSPSRVETALRNPLDWVLYHVGANAG
+GTLAQSVGTLVHSVAEHHPEGVPEDVRAELERRLPELGLPEGWITEIEHDRARGLVDAYI
+GYWSIARAAGRRPVAQEVRLLADLTWGGTTVRITGVVDRLEADAQGRPFIADLKTGRSAP
+TGAEMARQPQLAAYQVAVRAGGLEQVRDDPATDPALRAALAGLERPTTPAGAALVQLGAG
+TQKTKVQDQPALEDEDTWALEQVFTAARRTTGPRFLALHEAGARRCALPSVCPLCSEGRQ
+VTEWPR
+>2_1279
+MSTTPHPSEPRTEPTPQAADADPADLAALLAEPDEEPPHAAPVPARLVRGVGQDRAGVVL
+TVEQEAVAGLGEGHGAHLVLGAPGTGRSTVAVEYAARRLEAGLDPESLLVLAPSREAAAR
+LRDALTERLAAAGHGTRAVTPVRTWASYAFDLIRRARVTGPLRGLSRPPRLLSGAEQDTV
+IAELLDTYAAGLAPAPEWPRDVAQAVDTRGFRREVRELVDRMSEFGVEPGVLQELGRRHG
+RPVWEAAAELVQDYRDRLDLGMAEAFDAAGLISTAVRLLTERFPDDPERDAAALAFAEAE
+QARLRAIVVDDLQEAGPAVHDLLVHLGRGRDVLLTASPDTTVQGFRGARPDLVSRYPAAL
+DPDAVPGASSPDPDARTHVLTAGHRMSAGVQEGWLRAARRIRQRTVGVELTRTRTVPAGE
+GGAVEGHAVPSRAHEDQLVLERVLRVHHEDGVPLDGLAVIARSGARAAALGRHLEAAGVP
+VRREAAGEVLKDEPAVAPLLTLLRAVSDQAEDPEAGVALEADEAVALLRGPYGRATALNI
+RRLRQDLLAAERARGGRRTSDELLVAAFGDPALAGEETDRHRALRRLAWMHRDGLAAARE
+PGATAETVLWAVWAASGRADRWRAAALGRAEGAEGRREARRADADLDAVVALFRIAERFV
+DQFPGAAPADFSRYMESQDLPMDTLARRAETGDAVHVLTPAGAAGREWDTVIVVGLQEGA
+WPNTALRGQLLGATDLTDLLTAAAVDGAWPTDHRTRLAEVRQDELRMLAAAVSRARRRVV
+ATAVRNEDETPSDFLDLLDPVADVAAGRPLTEVPLPLTAAALVAAARRRLEAPDLPEALV
+GLEDPAAAAVLAALAEDGVAAAAPDRWWGLAPLSTDAPLTDITAEPVRLSPSRAQTALEN
+PLNWLLYHVGAQAGGTLAQSIGVLVHSVAEHHPDGEPGAVRAELERRLPELGLPEGWTTD
+LQHARARRLVEAYIRYWSQMRAEGRRPVAQEVALHVPLAWGDERVEISGVIDRLEVDATG
+RPYVVDLKTGSSKPDTAELERLPQLAAYQVAVRARGLELLAEDPATDPALRRALSAIEAP
+AEPGGAALVQLGAATKTKATVQPQPAVTADDDWALDQVFTAARRTVGPRFLAVHRPGVRC
+ALPSVCPLCTEGRQATEWHR
+>3_1186
+MTREHGVDPFDDDAAAPERAARLVRTAAAPEDRITLTDEQEAIASLAPGHNAVLVLGAPG
+TGRTTVAVEYAARRIEAGLDPESLLLLAPSRDAAARLRDALTRRLAAAGRGTRAVTPVRT
+WSSYAFDLLRRARVTGPLRHLEVAPRLLTGAEQDTVIAELLEGYAAGLAAAPDWPDDVAP
+AVEARGFRREVRELVDRMSELGLEPGCLQELGTAHGRPEWEAAAVLLQDYRDRIDLGMAE
+AFDAAGLLSAAVRVLTERHPEDPERDAAAQAFVAEERDRLAVLVVEDLHEATPAVHDLLS
+VLGRGRDVLLTASPDTTVEGFRGARPDLLARYPEVLDPDPVPGAAPPASPDGRVRVLTRG
+HRMRAAVQDAYLRVARRVRQRTAGVERTRTETVPADGDGAVRAHVVPTRAHEDQLVLERV
+LRVHHEDGVPLDRILVVARSGSRVAALARHLEAEGVPVLRDAAGLVLKEEPAVAPLLTLL
+DAAGALAEDPEARVEDVLDPDEVVGLLTGRYGMASALHVRRLRQDLLAAERGRGGRRTSD
+ALLAAALLDPSLAGPEHERHRALRRVHWMLRDGLEAARAPSASPETVLWALWSASGRAER
+WRSLALRPAEHANDRRESRRADADLDAVVALFKVAERFVDQFPGASPESFAVYMESQDLP
+VDTLARRAESGDAVHVRTPAAAAGQEWDTVIVVGLQEGVWPNTRLRGQLLGATDLVDLVT
+LPADAPWPTDHRTRLREVRQDELRMLAAAVSRARRQVVATAVRSPDEGPSDFLDLVDPPE
+RLPAEARDAAGVRRLTAVPDPITAPALVGRLRRVLEAGDEADAADGATPRAAAAAGLAAL
+AEDGVTVADPRRWWGLLPLSTEAALVDPEREVVALSPSRVETALRNPLDWVLYHVGANAG
+GTLAQSVGTLVHSVAEHHPEGVPEDVRAELERRLPELGLPEGWITEIEHDRARGLVDAYI
+GYWSIARAAGRRPVAQEVRLLADLTWGGTTVRITGVVDRLEADAQGRPFIADLKTGRSAP
+TGAEMARQPQLAAYQVAVRAGGLEQVRDDPATDPALRAALAGLEHPTTPAGAALVQLGAG
+TQKTKVQDQPALEDEDTWALEQVFTAARRTTGPRFLALHEAGARRCALPSVCPLCSEGRQ
+VTEWPR
+>4_1394
+MTREHGEDPFDDDAAAPERAARLVRTAAAPEDRITLTDEQEAIASLAPGHGAVLVLGAPG
+TGRTTVAVEYAARRIEEGLDPESLLLLAPSRDAAARLRDALTRRLAAAGRGTRAVTPVRT
+WSSYAFDLLRRARVTGPLRHLEVAPRLLTGAEQDTVIAELLEGYAAGLAAAPDWPADVAP
+AVEARGFRREVRELVDRMSELGLEPGRLQELGTAHGRPEWEAAAVLLQDYRDRIDLGMAE
+AFDAAGLLSAAVRVLTERHPEDPERDAAAQAFVAAERDRLAVLVVEDLHEATPAVHDLLT
+VLGRGRDVLLTASPDTTVEGFRGARPDLLARYPGVLDPDPVPGAAPPASPDGRVRVLTRG
+HRMRAEVQDAYLRVARRVRQRTAGVERTRTETVPADGDGAVRAHVVPTRAHEDQLVLERV
+LRVHHEDGVPLDRILVVARSGSRVAALARHLEAEGVPVLRDAAGLVLKEEPAVAPLLTLV
+DAAGALAEDPEARVEDVLDPDEVVGLLTGRYGMASALHVRRLRQDLLAAERGRGGRRTSD
+ALLAAALLDPSLAGPEHERHRALRRVHWMLRDGLEAARAPSASPETVLWALWSASGRAER
+WRSLALRPAEHANDRRESRRADADLDAVVALFKVAERFVDQFPGASPESFAVYMESQDLP
+VDTLARRAESGDAVHVRTPAAAAGQEWDTVIVVGLQEGVWPNTRLRGQLLGATDLVDLVT
+LPADAPWPTDHRTRLREVRQDELRMLAAAVSRARRQVVATAVRSPDEGPSDFLDLVDPPE
+RLPAEARDAAGVRRLTAVPDPITAPALVGRLRRVLEAGDEADAADGATPRAAAAAGLAAL
+AEDGVTVADPRRWWGLLPLSTEAALVDPKHEVVALSPSRVETALRNPLDWVLYHVGANAG
+GTLAQSVGTLVHSVAEHHPEGMPEDVRAELERRLPELGLPEGWITEIEHDRARGLVDAYI
+GYWSIARAAGRRPVAQEVRLLADLTWGGTTVRITGVVDRLEADAQGRPFIADLKTGRSAP
+TGAEMARQPQLAAYQVAVRAGGLEQVRDDPATDPALRAALAGLERPTTPAGAALVQLGAG
+TQKTKVQDQPALEDEDTWALEQVFTAARRTTGPRFLALHEAGARRCALPSVCPLCSEGRQ
+VTEWPR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000926.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000926.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f5afbf58ed5ddc34163975dd335cad7345e6e0cc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000926.fa
@@ -0,0 +1,39 @@
+>0_1381
+MEASPDDPADFSTAVVVDGEGQRWRVRSPRTPEAGIRLETELQVLAGLTPAVRAALPFRT
+PSVAGAVRLEGLRTFVYQDMPGRPVSLDELARLGEPAVQDVGRVLAAIHTLPDDVVDQAD
+LPSYSAEEIRQRHLHALDQAATSGRVPPLLLRRWEEAMEEEALWRFTPVPVHGDLHEDNL
+LLERGRVVGVTGWTDLHRGDPAADVAWLAAAEDPDLADRVLDAYESRRAAAGAADDGDTH
+LMRRAALLAEFALAQWLARGLDRHDAAMVTEAEAMLAELAADVRAAQEAEDRQDREQAAA
+DAAEDADAAADARDDAQRHAAVQEGSPPGGAEPGGASGRRRVTDA
+>1_1465
+MDRQPLRLAALAAAAVPGLAPVSVEASPDDPADFSTAVVVDGEGQRWRVRSPRTPEAGIR
+LETELQVLAGLTPAVRAGLPFRTPSVAGAVRLEGLRTFVYQDMPGRPVTLDELARLGEPA
+VQDVGRVLAAIHTLPSDVVDHADLPSYTAEQIRQRHLHALDQAATSGRVPPLLLRRWEEA
+MEEEALWRFTPVPVHGDLHEDNLLLERGRVVGVTGWTDLHVGDPAGDVAWLAAATDPDLA
+DRVLDAYAARRADAGAADDGDAHLMRRAALLAEFALSQWLTRGLDRHDEGMVAEAEAMLA
+ELEGDVRAAQEAAARQAEADAAADAAEDARDAAEDAREAAAVRSADPETGSLPAVEVVRP
+INGGPGRP
+>2_1281
+MHRQPLRLAALAAAAVPGLTPVSVEPSPDDSPDVAAALVVDDAGQRWLVRSPRSAEAGIR
+LETELQVLAGFDPHLRAGLPFRVPSVAGAVRIDGLRTFVYQALPGEPATLEQIGGLGDAA
+VQDLGRILAALHTLPLTVVEQADLPVYTADHVRERHLTELDRAAATGQVPPRLLRRWEET
+LEEADLWDFSPVPVHGDLHEDGLLVSRGRVVGVSGWTDLHVGDPAEDFAWLAAAEDPALP
+ERVLAAYAERLDSEGAAAPDAHLLRRGALLAEFALARWLLRGVDRHDAETTADARALLTE
+LAEAVGVAEATAPQAAPTADNVVGLHAAHDDRAPDWDEDDADGVVDVSDDDGRAGGTVSV
+LRPVD
+>3_1184
+MDRQPLRLAALAAAAVPGLAPVSVEASPDDPADFSTAVVVDGEGQRWRVRSPRTPEAGIR
+LETELQVLAGLTPAVRAGLPFRTPSVAGAVRLEGLRTFVYQDMPGRPVTLDELARLGEPA
+VQDVGRVLAAIHTLPSDVVDHADLPSYTAEQIRQRHLHALDQAATSGRVPPLLLRRWEEA
+MEEEALWRFTPVPVHGDLHEDNLLLERGRVVGVTGWTDLHVGDPAGDVAWLAAATDPDLA
+DRVLDAYAARRADAGAADDGDAHLMRRAALLAEFALAQWLTRVLDRHDEAMVAEAEAMLA
+ELAGDVRAAQEAAARQAEADAAADAAEDARDAAEDAREAAAARTADPETGPLPAAEVVRP
+INGGPGRP
+>4_1392
+MDRQPLRLAALAAAAVPGLAPVSAEASPDDPADFSTAVVVDGEGQRWRVRSPRTPEAGIR
+LETELQVLAGLTPAVRAGLPFRTPSVAGAVRLEGLRTFVYQDMPGRPVTLDELARLGEPA
+VQDVGRVLAAIHTLPSDVVDHADLPSYTAEQIRQRHLHALDQAATSGRVPPLLLRRWEEA
+MEEEALWRFTPVPVHGDLHEDNLLLERGRVVGVTGWTDLHVGDPAGDVAWLAAATDPDLA
+DRVLDAYAARRADAGAADDGDAHLMRRAALLAEFALAQWLTRGLDRHDAGMVAEAEAMLA
+ELEGDVRAAQEAAARQAEADAAADAAEDARDAAEDAREAAAARTADPETGPLPAVEVVRP
+INGGPGRP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000928.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000928.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3c0f206e8a5192470a87090ed5cb88b592918c65
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000928.fa
@@ -0,0 +1,65 @@
+>0_1383
+MSTPDEILRGLDPEQRRAATALQGPVCILAGAGTGKTRAITHRIAYGVASGVFDPHRTLA
+LTFTARAAAEMRTRLRDLGVAGVQARTFHSAALRQLQYFWPQAVGGPMPSLIENKVRLLT
+EVAQGMRMSVDRAGLRDLAGEIEWAKVSLHAPEGYAEAARGREMPAGWDATTVARLYTGY
+EEAKTARNMIDFEDVLLILVGILSTEPRIAATIRDQYRVFLVDEYQDVSPLQHRLLDLWL
+GDRGDLCVVGDASQTIYSFTGATSRFLTDFRERHPDATVVELVRDYRSSPQVVEAANRLL
+ADRTKAGQRDRTMPRWPDPLELVSQRPNGPDPVFAECTDDEAEAGWVADRIRALIDDGVA
+ASEIAVLFRTNGQSQAFETALSSAGIGYQLRGGERFFSRREVRDGILQLRAAARAAQDLT
+GDDVPDRVRDVLASLGYSAQPPAATGAARERWESLHALVNLAEQLAGSRGAEFTLTELVA
+ELDERAQHQHAPTVQGVTLASLHSAKGLEWDAVFLVGLSEGLMPISFAETQAEVDEERRL
+LYVGITRAREHLSLTWTLSRGTGGRSTRRPSRFLWAIDPTLGGTREHAPARGSAPGAAKP
+RRRGATVATCRTCGKPLETGAERKVGRCLDCPATYDEAVLEQLRDWRSRTAAEMKMPAFV
+VFTDATLVAIAEAMPASPKELLAVPGLGRTKLEKHGEALLELLHGTPTA
+>1_1463
+MSTPDEILRGLDPEQRRAATALHGPVCILAGAGTGKTRAITHRIAYGVASGVFDPHRTLA
+LTFTARAAAEMRTRLRDLGVAGVQARTFHSAALRQLQYFWPQAVGGPMPSLIENKVRLLT
+EVAQRMRMTVDRAGLRDLAGEIEWAKVSLHAPEGYAEAAKEREMPAGWTATTVARLYTGY
+EEAKTARNMIDFEDVLLILVGILSTEPQIAATIRDQYRVFVVDEYQDVSPLQHRLLDLWL
+GDRGDLCVVGDASQTIYSFTGATSRFLTDFRERYPAATVVRLVRDYRSSPQIVEAANRLL
+ADRTKAGERDRTMPRWPDPLELVSQRPAGPDLVFAECTDDEAEAGWVADRIAALIDDGVP
+ASEIAVLFRTNGQSQAFETALSSAGIGYQLRGGERFFSRREVRDGILQLRAAARAAQDLT
+GDDVTDRVRDVLSSLGYSAEPPSATGAARERWESLHALVNLADQLATTRGAEFTLTELVA
+ELDERAQHQHAPTVQGITLASLHSAKGLEWDAVFLVGLSEGLMPISFAETQAEVDEERRL
+LYVGITRARQHLSLTWTLSRGTGGRSTRRPSRFLWAIDPTLGGTREHAPARGSAAGPTAP
+RRRGAKVAVCRTCGKPLETGAERKVGRCLDCPATYDEAVLEELRDWRTRTAAEMRMPAFV
+VFTDATLVAIAEAMPRTPAELLKVPGLGKAKLEKHGPELLELLHGTPTA
+>2_1283
+MSTPDEILRGLDPEQRKAATALHGPVCILAGAGTGKTRAITHRIAYGVASGVFDPHRTLA
+LTFTARAAAEMRTRLRDLGVDGVQARTFHSAALRQLQYFWPQAVGGQMPTLVENKVRLLT
+EVAHRMRMTVDRAGLRDLAGEIEWAKVSLHAPEGYAEAARDREMPAGWTATTVARLYTGY
+EEAKTARNMIDFEDVLLILVGILSTEPKIAATVREQYRVFVVDEYQDVSPLQHRLLDLWL
+GDRQDLCVVGDSSQTIYSFTGATSRFLTGFRERYPEATMVKLVRDYRSSPQIVGAANTLL
+AERTQAGLRDRSLPFWPEPLALSSQRPSGPDVVFAECQDDEAEAGWVAQRIQGLLDDGVP
+AAEIAVLFRTNGQSEAFETALSAAGIGYQLRGGERFFSRREVREGVLQLRAAAREAQDLV
+GADVVQRVKDVLSSLGYSDTPPSASGAARERWESLHALVNLADQLAGTREDFTLVQLVAE
+LDERAQAQHAPTVQGVTLASLHSAKGLEWDAVFLVGLSEGLMPISFADTPAEVDEERRLL
+YVGITRARQHLHLTWTLARSGGGRANRRPSRFLRAIDPTLGGTREHAPAAAMPARRPRRG
+ATVAVCRTCGRPLETGAERKTGRCVDCPALYDEGVLDTLKDWRSRVAKTDKVPAFVVFTD
+ATLEAIAETMPATPAELIKVKGVGKSKLDRFGQDVLDLLHGTSAA
+>3_1182
+MSTPDEILRGLDPEQRRAATALHGPVCILAGAGTGKTRAITHRIAYGVASGVFDPHRTLA
+LTFTARAAAEMRTRLRDLGVAGVQARTFHSAALRQLQYFWPQAVGGPMPSLIENKVRLLT
+EVAQRMRMTVDRAGLRDLAGEIEWAKVSLHAPEGYAEAAKEREMPAGWTATTVARLYTGY
+EEAKTARNMIDFEDVLLILVGILSTEPQIAATIRDQYRVFVVDEYQDVSPLQHRLLDLWL
+GDRGDLCVVGDASQTIYSFTGATSRFLTDFRERYPAATVVRLVRDYRSSPQIVEAANRLL
+ADRTKAGERDRTMPRWPDPLELVSQRPAGPDLVFAECTDDEAEAGWVADRIAALIDDGVP
+ASEIAVLFRTNGQSQAFETALSSAGIGYQLRGGERFFSRREVRDGILQLRAAARAAQDLT
+GDDVTDRVRDVLSSLGYSAEPPSATGAARERWESLHALVNLADQLATTRGAEFTLTELVA
+ELDERAQHQHAPTVQGITLASLHSAKGLEWDAVFLVGLSEGLMPISFAETQAEVDEERRL
+LYVGITRARQHLSLTWTLSRGTGGRSTRRPSRFLWAIDPTLGGTREHAPARGSAAGPTAP
+RRRGAKVAVCRTCGKPLETGAERKVGRCLDCPATYDEAVLEELRDWRTRTAAEMRMPAFV
+VFTDATLVAIAEAMPRTPAELLKVPGLGKAKLEKHGPELLELLHGTPTA
+>4_1390
+MSTPDEILRGLDPEQRRAATALHGPVCILAGAGTGKTRAITHRIAYGVASGVFDPHRTLA
+LTFTARAAAEMRTRLRDLGVAGVQARTFHSAALRQLQYFWPQAVGGPMPSLIENKVRLLT
+EVAQRMRMTVDRAGLRDLAGEIEWAKVSLHAPEGYAEAAKEREMPAGWTATTVARLYTGY
+EEAKTARNMIDFEDVLLILVGILSTEPQIAATIRDQYRVFVVDEYQDVSPLQHRLLDLWL
+GDRGDLCVVGDASQTIYSFTGATSRFLTDFRERYPAATVVRLVRDYRSSPQIVEAANRLL
+ADRTKAGERDRTMPRWPDPLELVSQRPAGPDLVFAECTDDEAEAGWVADRIAALIDDGVP
+ASEIAVLFRTNGQSQAFETALSSAGIGYQLRGGERFFSRREVRDGILQLRAAARAAQDLT
+GDDVTDRVRDVLSSLGYSAEPPSATGAARERWESLHALVNLADQLATTRGAEFTLTELVA
+ELDERAQHQHAPTVQGITLASLHSAKGLEWDAVFLVGLSEGLMPISFAETQAEVDEERRL
+LYVGITRARQHLSLTWTLSRGTGGRSTRRPSRFLWAIDPTLGGTREHAPARGSAAGPTAP
+RRRGAKVAVCRTCGKPLETGAERKVGSCLDCPATYDEAVLEELRDWRTRTAAEMRMPAFV
+VFTDATLVAIAEAMPRTPAELLKVPGLGKTKLEKHGPELLELLHGTPTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000935.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000935.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fad89f63562def42fa47900d920e84c0033db8f6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000935.fa
@@ -0,0 +1,66 @@
+>0_1391
+MTAAGLGGVGLVLAAPGAGAGIAPPGVYVVDEAGVLSSADEQRLTQEITDLRRDTGQGLY
+VVFVDSFETNAQGLADDVARQRGLGTNDSVLAIAVEDRSYGLGSGGDASLQNQITRTYVG
+PQLSRIGTDPGSAEWLAAGTAAVQGLDDAADGTLDGTGASGAEYDPEGALPAGSGAGAGT
+GAGSSQGSDEGSGVLTAVLGAGAVAAAVGGGVLVARNRRKKDGGAVERSGRDARPVERDP
+LDEMSLEDLRTRAGSKLVAADDAIRSSEQELGFAMASYGEDAVRTFREDIDQAKEHMRAS
+FQLQHQLDDHIPDTEEDQRSWLKEIIQRSDAVGAALASHQKDFDSLRDLENNVPEALERI
+DARLPEARARVQQAESSISALHGQYAESALAEVADNAAQARERLDFVETAEAKARQAWET
+QDRSTAALAVRAAEESLSQVDTLTEAVGKAEGSLRTIVGNLQTGLAQSEQDLAEAEALVA
+NGSHPELAGPVAGMKTTLAAVRRSLSGGRPDPLDLLHQLEAAHRQLNTPLSGVRDAREQA
+RQASQMLNSAIAQAQAQIDGTADFIGARRGAVGSEARTRLAEADHTLRAAIDLSRTDPVT
+ALQQAQRASQLAERASELARQDVEGFGYGGSMYGPGMGGMYGGRQRSGAGASFGGGLGGA
+LLGGILMNSMFNSGGGSWGGGGFGGFDGGGLGGGDFGGFGDISGGGF
+>1_1433
+MTVLTRPADVGRLARAVTAAGLGGLGLLVAAPTAQAVAVPPGVYVVDEAGVLSTSDEQRL
+TQEIQDLRRDTGQGLYVVYVDEFSTDAQTLAQDVARQRGLGTNDSVLAIAVEERAYGLDS
+GGDANLQNQVTRTYVGPQLSKIGTDPGSAEWLAVGIAAVQGLDDAADGTLDGTGASGAEY
+DPAGALPAGTTGGGSTAQGASDGGGALTAVLGAGAVAAAVGGGVLVARSRRRTQGGAVER
+GRTEEARRDPLDELSVEQLRTQAGSKLVAADDAIRSSEQELGFAEASYGEKSVATFRQDI
+DQAKEHMRASFQLQHQLDDEIPDTEAEQRAWLKEIIQRSEAVGASLAAHKKEFDSLRDLE
+NQVPEALERLEARLPEARSRVQDSESAITALHGQYAESALAEVADNAAQARERLEFVETA
+LAKSRSAWEAQDRSTAALAVRAAEEALSQVDTLTEAVGKAEGSLRAMLGNLQTGLAQSEQ
+DVAEAEALVANGSHPELAGPVAGMKTAVNAVRQALAAGRPDPLELLHQLEAAHRQLNTPL
+AGVRDAREQARQASQVLTSTIAQAQAQIDGTADFIGARRGAVGSEARTRLAEADHTLRSA
+ISLGRTDPVAALQQAQRASQLAERASELARADVEGFGYGPGMGSRYGTRPRAGVGGSFGG
+GLGGALLGGILMNSILNSGHGDSWGGGGFGGFDGGGLGGGDFGDISGGGF
+>2_1291
+MAESVVRPSAPRLSRAAVLGGLGAITTTALLAPGAHAAVDVPPGTFVVDQAEVLSSAQES
+ELTQDITQLQSKAGQNLYVVYVDKFDSTPQATIDSVVQQRGLGNSDSVLAIAVENRNYGF
+DTGMSSTMQSDIRSAYILPALRKAAAGGDWEAPAVAAVQGLDDAANGTLDGRGRSGETYQ
+PDGTLPQAAEQDSSAQTSTSDSGNGASGALVGAGALAAVAGGAYVVSRRRRKSDGGAEPG
+AVATGPQASRDPLDELSVDELRKRAGATLVAADDAIRSSEQEVGFAMASYGEGAVGTFRQ
+DIEKAKEHMRASFQLQHQLDDEIPDTEADQRSWLKEIIARSEQVGATLAAHKKEFDSLRD
+LENSVPEAISALESRVPQAEGAVQAAERELVDLHGRYAESALTEVNDNATQARERLEFVK
+TAEAKARASLEAGDRSTAAVAVRAAEESLSQVGTLTEAVSKAGAALSTHVANLQMGISQS
+EQDLAEAQALLSAGRNPELAGPVGGMQQTLAAVRAELQSGRPDPLALLQRLESAHRQLNT
+PLSGVRDAREQARQAEQMLSAAISQAQAQIDGTADFIGARRGAVGSEARTRLAEADRSLQ
+TAMSLRSTDPVAALDHAQRASQLADRASERAQQDVADFGYGGMGGYGGLGGGYAGAGYRG
+GYGMPRSGAGGGFAGGLGGALLGGILMNSMFGGHHHDSGFGGGDWGGGGFGGFGGGGLDG
+GDFGGFGDADFGGF
+>3_1174
+MTVPTRPADVGRLARAVTAAGLGGLGLLVAAPASHAVTVPPGVYVVDEAGVLSTSDEQRL
+TQEIQDLRRDTGQGLYVVYVDEFSTDAQTLAQDVARQRGLGTNDSVLAIAVEDRAYGLDS
+GGDADLQNQVTRTYVGPELSKIGTDPGSAEWLAAGTAAVQGLDDAADGTLDGTGASGAEY
+DPAGALPAGTAGDGSTAQGASGGGALTAVLGAGAVAAAVGGGVLVARSRKRTQGGAVEGG
+RTEEVRRDPLDELSVEQLRTQAGSKLVAADDAIRSSEQELGFAEASYGEKSVATFREDID
+RAKEHMRASFQLQHQLDDEIPDTEAEQRAWLKEIIQRSEAVGAALAAHKKEFDSLRDLEN
+QVPEALERVDARLPEARSRVQESESAIAALHGQYAESALAEVADNATQARERLEFVETAV
+AKARSAWDAQDRSTAALAVRAAEEALSQVDTLTEAVGKAEGSLRAMLGNLQTGLAQSEQD
+VAEAEALVANGSNPELAGPVAGMKNAVNAVRRALAAGRPDPLELLHQLEAAHRQLNTPLA
+GVRDAREQARQASQVLTSTIAQAQAQIDGTADFIGARRGAVGSEARTRLAEADHTLRSAI
+SLGRTDPVAALQQAQRASQLAERASELARADVEGFGYGPGMVGGMYGARPRAGVGGSFGG
+GLGGALLGGILMNSILNSGSWGGGGFGGFDGGGLGGGDFGGFGDISGGGF
+>4_1382
+MTVPTRPADVGRLARAVTAAGLGGLGLLVAAPASHAVTVPPGVYVVDEAGVLSTSDEQRL
+TQEIQDLRRDTGQGLYVVYVDEFSTDAQTLAQDVARQRGLGTNDSVLAIAVEDRAYGLDS
+GGDADLQNQVTRTYVGPELSKIGTDPGSAEWLAAGTAAVQGLDDAADGTLDGTGASGAEY
+DPAGALPAGTAGDGSTAQGASGGGALTAVLGAGAVAAAVGGGVLVARSRKRTQGGAVEGG
+RTEEVRRDPLDELSVEQLRTQAGSKLVAADDAIRSSEQELGFAEASYGEKSVATFRQDID
+QAKEHMRASFQLQHQLDDEIPDTEAEQRAWLKEIIQRSEAVGASLAAHKKEFDSLRDLEN
+QVPEALERLEARLPEARSRVQDSESAITALHGQYAESALAEVADNAAQARERLEFVETAL
+AKSRSAWEAQDRSTAALAVRAAEEALSQVDTLTEAVGKAEGSLRAMLGNLQTGLAQSEQD
+VAEAEALVANGSHPELAGPVAGMKTAVNAVRQALAAGRPDPLELLHQLEAAHRQLNTPLA
+GVRDAREQARQASQVLTSTIAQAQAQIDGTADFIGARRGAVGSEARTRLAEADHTLRSAI
+SLGRTDPVAALQQAQRASQLAERASELARADVEGFGYGPGMVGGMYGARPRAGVGGSFGG
+GLGGALLGGILMNSILNSGSWGGGGFGGFDGGGLGGGDFGGFGDISGGGF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000936.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000936.fa
new file mode 100644
index 0000000000000000000000000000000000000000..36d837ffc146b6d5d03dafba3516bb78d6f5ee76
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000936.fa
@@ -0,0 +1,45 @@
+>0_1392
+MRSEDTVAHTPADQTPTDQTPTDQTPAPARPAAEARHPGRRAPRARAGLGLLAAAVLVTG
+LAGCGVAAEPGADASGSAPDSSTSSGSASADPGQDVADTAVGTAAKTALPSVVTISATSG
+QGSGSGSGTILDEEGHILTNTHVVTLGGQASDAELTVRTADGTVYAATVVGTDPLSDLAV
+IKIDAPDLTPIQMGRSADLKVGDDAIAIGAPLGLPNTVTDGIISTLDRTIAVASSEAPRQ
+QESEQGQGPGQGSSSGPERFRFELPGAQQGPQGEVYINVLQTDAAINPGNSGGPLVDGQG
+RLVGVNVAIASAGQGQGEAGNIGVGFAIPVDYAQRVAQDLIEHGEATHAVLGVSVTPEPA
+EVQGGDAQARTVFSDGARVREVVADSPAAQAGLREGDVITAVGERAVIDTESLTAVVREH
+RVGDSAEITYLRDGAEQKAQVEFQEDTSQ
+>1_1432
+MDQTAAPTQPPVPTARTVARPRPQSRARAGAGLLAAAVLMVGLSGCAVAEDGGEAASEAA
+SSSSSQATDTSAEAGGQPVADTAVGDAARTALPSVVTISATSSSASGSGSGSILDTEGHI
+LTNTHVVTLGGQANDAELTVRTSDGEVYAATVVGTDPLSDLAVIKIDAPDLTPIQIGRSG
+DLKVGDEAVAIGAPLGLPNTVTDGIISTLDRTIAVASSEAPEPQGESSGSSSGSDQYRFQ
+LPGTPQGTRGEVYINVLQTDAAINPGNSGGALVDAEGRLVGVNVAIASAGQDPSEAGNIG
+VGFAIPVDYAQRVAQDLIDHGKATHAMLGVSVTPEPAEVQGGGENAQTVFSDGARVQQVV
+GGSAADAAGLKEGDVITAVGDRAVIDSESLTAVVREYRVGDSVDVTYLRDGAEQKTEVTF
+TEDTQS
+>2_1292
+MGRAAHRPDCTDGGADQKPAQTRSEATVEHPAPDTVTPEAAPVASSPRPASPRGRRRALG
+GALAATVLAGSLAACGVAGPGAGASASASASGSSSAAAAPAVGSTDQPVADNPVGAAAAK
+ALPSVVTISATSGSSAGSGSGSILDAEGHILTNTHVVTLGGTASDASITVRTSDGKVYAA
+KVVGTDPVSDLAVIKIDAQGLTPITIGSSKDVKVGDDAIAIGAPLGLSNTVTDGIISTLN
+RTIAIQSSAAPEGQTGSSGTERFRFQLPGEQGQSQQQDIYINVLQTDAAINPGNSGGALV
+NGAGELVGVNVAIASAGGSSASGAESGNIGVGFAIPVDYAKRVADDLIADGTASHGLLGV
+TVQPQPAQVQGAAGGSKSTEFSAGALVHTVSSGSPAEKAGLKEGDVITQVGERTVTDTES
+LTAAVREYRDGETTPVRFTRDGREQTADVTLTAMEASR
+>3_1173
+MDQTAAPTQPPVPTARTVARPRPQSRARAGAGLLAAAVLMVGLSGCAVAEDGGEAASEAA
+SSSSSQATDTSAEAGGQPVADTAVGNAARTALPSVVTISATSSSASGSGSGSILDTEGHI
+LTNTHVVTLGGQANDAELTVRTSDGEVYAATVVGTDPLSDLAVIKIDAPDLTPIQIGRSG
+DLKVGDEAVAIGAPLGLPNTVTDGIISTLDRTIAVASSEAPEPQGESSGSSSGTDQYRFQ
+LPGTPQGTRGEVYINVLQTDAAINPGNSGGALVDAEGRLVGVNVAIASAGQDPSEAGNIG
+VGFAIPVDYAQRVAQDLIDHGKATHAMLGVSVTPEPAEVQGGSENARTVFSDGARVQQVV
+GESAADAAGLKEGDVITAVGDRAVIDSESLTAVVREHRVGDSVDVTYLRDGAEQTTEVTF
+TEDTRS
+>4_1381
+MDQTAAPTQPPVPTARTVARPRPQSRARAGAGLLAAAVLMVGLSGCAVAEDGGEAASEAA
+SSSSSQATDTSAEAGGQPVADTAVGNAARTALPSVVTISATSSSASGSGSGSILDTEGHI
+LTNTHVVTLGGQANDAELTVRTSDGEVYAATVVGTDPLSDLAVIKIDAPDLTPIQIGRSG
+DLKVGDEAVAIGAPLGLPNTVTDGIISTLDRTIAVASSEAPEPQGESSGSSSGAEQYRFQ
+LPGTPQGTRGEVYINVLQTDAAINPGNSGGALVDAEGRLVGVNVAIASAGQDPSEAGNIG
+VGFAIPVDYAQRVAQDLIDHGKATHAMLGVSVTPEPAEVQGGSENARTMFSDGARVQQVV
+GESAADAAGLKEGDVITAVGDRAVIDSESLTAVVREHRVGDSVDVTYLRDGAEQTTEVTF
+TEDTRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000945.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000945.fa
new file mode 100644
index 0000000000000000000000000000000000000000..aa0c72cb0cce5eecb00b7cbcf8aeeb7c21c7f8fd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000945.fa
@@ -0,0 +1,20 @@
+>0_1401
+MSPDYDPHASSLTGRTDPEVLAELYAIRGSIDNIDASLVYLLAERFKFTQRVGALKARHE
+LPPSDPGREAAQIERLHRLALEADLEPAFAEKFLNFIIAEVIRHHRALASGAGPEAPAGD
+PAADSLPDGTRTDAGDDPRRGGADA
+>1_1421
+MSPDYDPHASSLPGTADPAVLDELFAIRGSIDNIDASLVYLLAERFKFTQRVGALKARHD
+LPPSDPGREAAQIARLHRLALEADLEPAFAEKFLNFIIAEVIRHHRALAAEGRPDAEAEP
+GESPGDADD
+>2_1303
+MSHDYDPHASSLAGTADQDILEELYEIRGSIDNIDASLVYLLAERFKFTQRVGRLKARHA
+LPPSDPGREAAQIERLQDLARDADLEPEFAEKFLNFIIAEVIRHHRAIAEDEAPVARPAE
+ASDAGSADA
+>3_1162
+MSPDYDPHASSLPGTADPAVLDELFAIRGSIDNIDASLVYLLAERFKFTQRVGALKARHD
+LPPSDPGREAAQIARLHRLALEADLEPAFAEKFLNFIIAEVIRHHRALAAEGRPDAEAEP
+GESPGDADD
+>4_1370
+MSPDYDPHASSLPGTADPAVLDELFAIRGSIDNIDASLVYLLAERFKFTQRVGALKARHD
+LPPSDPGREAAQIARLHRLALEADLEPAFAEKFLNFIIAEVIRHHRALAAEGRPDAEAEP
+GAGSGDADD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000950.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000950.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7158e30f444bad35d75a1dd435969b768d5b3eb0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000950.fa
@@ -0,0 +1,25 @@
+>0_1407
+MTMDVSYIARNLSLPESFRDHVAERTERLHTLAEGAETLEVRVTKSSHHKHSDETVRVEL
+TARGPREVVRAEADADDKQVAFDMAVTRLAERLRRMRDRRKDRRHGKLGASRGAGEVGFV
+PPLPPNGAQMAAEDAAREQDIPEEGTPVRIREKAFPATPMTVDEAVDAMELVGHDFFLFQ
+NSETGVPSVVYRRRGWSYGVIRLDESLPADHVSATEGERAYQAREA
+>1_1415
+MTMDVSYIARNLRLPESFRDHVVERTERLQPLAEGADTLEVRVTKSSHHKHSDETVRVEL
+TVRGPRDVVRAEADADDKLVAFDQAATRLAERLRRLRDRRKDRRHGKLGASRGAGEVGFV
+PPLPPSGAALAAEEAAEQDAPEVGTPVRIRQKAFPATPMSVDEAVDAMELVGHDFFLFQN
+AETGVPSVVYRRRGWSYGVIRLDESLPQDHVSASEGERAYQARED
+>2_1309
+MTLDVSYIARGITLSDRFREHVEERLEKIEPLAEGAETLEVKVSRSSHHRHSDEGMRVEL
+TLRGAREVVRAEGDADDKAAAFDAALSRIAERLRRMRDRRKDRRHGKGSAASRGAGEIPF
+VPPLPAVGQADAPADEAPESGTPVSIRAKRFPATPMSVDRAVDAMELVGHDFYLFQDETT
+GVPSVVYRRRGWSYGVISLDESLPAHHVAPVEGERVYQASREADAE
+>3_1156
+MTMDVSYIARNLRLPESFRDHVVERTERLQPLAEGADTLEVRVTKSSHHKHSDETVRVEL
+TVRGPRDVVRAEADADDKLVAFDQAATRLAERLRRMRDRRKDRRHGKLGASRGAGEVGFV
+PPLPPSGAALAAEEAAEQDAPEVGTPVRIRQKAFPATPMSVDEAVDAMELVGHDFFLFQN
+AETGVPSVVYRRRGWSYGVIRLDESLPQDHVSASEGERAYQARED
+>4_1364
+MTMDVSYIARNISLSESFRDHVVERTERLQPLAEGADTLEVRVTKSSHHKHSDETVRVEL
+TVRGPRDVVRAEADADDKLVAFDQAATRLAERLRRMRDRRKDRRHGKLGASRGAGEVGFV
+PPLPPSGAALAAEEAAEQDAPEVGTPVRIRQKAFPATPMSVDEAVDAMELVGHDFFLFQN
+AETGVPSVVYRRRGWSYGVIRLDESLPQDHVSASEGERAYQARED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000966.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000966.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8a0b1c19d3f6490c32645e705f3dd2fe07deea9f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000966.fa
@@ -0,0 +1,20 @@
+>0_1424
+MVGLALLDDAAAPSRLLAARRSAPAVLRGLWEFPGGKVETGEGPREALAREVREELGVAV
+RLGAEVPSPDPEGWELANGARMRVLWGVLAEEGAEPAALEDHDLLAWVPLSGAGAHHLDW
+IPADRPIVSAVVAGAATAFAAAP
+>1_1397
+MGLALLDDVAAPTRLLAARRSAPAPLRGLWEFPGGKVEPGEGVQEALLRECREELGVAVR
+LGPEVAAPEPDGWELANGARMRVFWGVLAEEGTTPRALQDHDLLAWLPLAGPGVRHLDWI
+PADRPIVAEVLRGAATAFSAGR
+>2_1328
+MSPATPQTPPVPSAPRPVVGVALVDDAARPTALLAARRSAPASLAGLWEFPGGKVEPEEG
+ADAALHRELVEELGVRVRLGTEVAAPEGPGWELANGARMRVWFGVLREDSGAPAALQDHD
+RLEWTPLTAEALHALDWIPADRPIVDALLAAVEAGRLGL
+>3_1138
+MGLALLDDVAAPTRLLAARRSAPAPLRGLWEFPGGKVEPGEGVQEALLRECREELGVAVR
+LGPEVAAPEPDGWELANGARMRVFWGVLAEEGTTPRALQDHDLLAWLPLAGPGVRHLDWI
+PADRPIVAEVLRGAATAFSAGR
+>4_1346
+MTSATPARPAPAARPTTSPRDGARPRQVVGLALLDDVAAPTRLLAARRSAPAPLRGLWEF
+PGGKVEPGEGVQEALLRECREELGVAVRLGPEVAAPEPDGWELANGARMRVFWGVLAEEG
+ATPRALQDHDLLAWLPLAGPGVRHLDWIPADRPIVAEVLRGAATAFSAGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000969.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000969.fa
new file mode 100644
index 0000000000000000000000000000000000000000..de85f2558919ae5368329a5e418ba5dd595db8d5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000969.fa
@@ -0,0 +1,20 @@
+>0_1427
+MTTPDSPAGVGAGPPPLRWRTRARGLWNLVNLSTPLGLVGAVVSGCALRPGPHGLIEARG
+WRHSFPGGAAFTVGDVVFTRPGLRMTEDLWRHEAGHAAQYAGMLGLPFLPAYAAAAAWST
+WRTGDPASRNPFERGAGLALGGYVERPVRRGPRRRR
+>1_1394
+MTAAPSRPSPPAHVRARGLWNLLNLATPLGLVGAVVAGCALRPGPHGLIEAHGWTHRFPG
+GAAFTVGDVVFTRPGLRMTPALWRHEAGHADQYALLLGLPFLPAYALAAAWSMWRTGDPA
+SRNVFERRASLALGGYIERPVVRGLRRRR
+>2_1331
+MSAAPARPTRPRGAARLRGLWNLLNLSTPLGVVGAVLAGCPLRPGPDGLLHAEGWRHRFP
+GGAAFTVGDVVFTRPGLEMTERLWRHEGAHAAQYAACLGLPFLPLYGMSAAWSSWRTGDP
+ASRNPFERGAGLERGGYVQAAVRRGPGRGALKPAGGDLRDARRA
+>3_1135
+MTAAPSRPSPPAHVRARGLWNLLNLATPLGLVGAVVAGCALRPGPHGLIEARGWTHRFPG
+GAAFTVGDVVFTRPGLRMTPALWRHEAGHADQYALLLGLPFLPAYALAAAWSTWRTGDPA
+SRNVFERRAGLALGGYVERPVVRGLRPRR
+>4_1343
+MTAARSRPSPPAHVRARGLWNLLNLATPLGLVGAVVAGCALRPGPHGLIEARGWTHRFPG
+GAAFTVGDVVFTRPGLRMTPALWRHEAGHADQYALLLGLPFLPAYALAAAWSMWRTGDPA
+SRNVFERRAGLALGGYVERPVVRGLRPRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000977.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000977.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e3555e1a223219dd3bee70e204a2441abf6ebe55
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000977.fa
@@ -0,0 +1,35 @@
+>0_1436
+MSQSSSRQPDPVTTAAAPVLSAADRLDRAESKAEVLIEALPWIQRFAGSVMVIKYGGNAM
+VSDELRRAFAEDVVFLHHVGVHPVVVHGGGPQINAMLDRLGIESEFRGGLRVTTEEAMDV
+VRMVLTGQVGRELVGLVNSHGPYAVGFSGEDAGLLRARRTGAVVDGQEVDLGLVGEVTGV
+DPTAILDVVRSGRIPVVSSVAPEIDEHGEPTGQVLNVNADTAAAALASALGAAKLVLLTD
+VEGLYADWPDRESLISSLTAGQLRALLPSLASGMIPKMAACLAAVDAGVQRAHVVDGRRP
+HSMLLEVFTSAGVGTPVVPDADTAGRPAPTTVQEDA
+>1_1384
+MTPHTDPATAAAPVLSTADRLDRAESKAEVLVEALPWIRRFAGTVMVVKYGGNAMVSEEL
+RRAFAEDIVFLHHVGVHPVVVHGGGPQINAMLDRLGIASEFRGGLRVTTEEAMDVVRMVL
+TGQVGRELVGLVNSHGPYAVGFSGEDAGLLRARRTGAVVDGQEVDLGLVGEVTGVDPTAI
+LDVIESGRIPVVSSVAPEINDDGEPTGQVLNVNADTAAAALAAALGAAKLVLLTDVEGLY
+ADWPDRDSLISSLTAAQLRALLPSLASGMIPKMAACLAAVDAGVQRAHVVDGRRPHSMLL
+EVFTSAGVGTQVVPDAEPTAPTTPEEDA
+>2_1344
+MTGQPAPADPTTPSVPVLSTAQRLERAASKAEVLVEALPWVQRFAGATMVIKYGGNAMVS
+DELRRAFAEDVVFLHHVGVHPVVVHGGGPQINAMLERLGIESEFRGGLRVTTPEAMEVVR
+MVLTGQVGRELVGLINSHGAYAVGSSGEDAGLFRARRTGAVVDGETVDLGLVGEVTAVNP
+EAIRDVIDAGRIPVVSSVAPEIGDDGEPTGEVLNVNADTAAAALAAGLGAAKLVLLTDVE
+GLYADWPDRDSLISSLTASQLRGLLPGLQSGMIPKMAACLHAVDSGVHRAHVVDGRRPHS
+MLLEVFTSDGVGTQVVPDPTPATRPASAPTTATAQEDA
+>3_1125
+MSPHTDPATAAAPVLSTADRLDRAESKAEVLVEALPWIRRFAGTVMVVKYGGNAMVSEEL
+RRAFAEDIVFLHHVGVHPVVVHGGGPQINAMLDRLGIASEFRGGLRVTTEEAMDVVRMVL
+TGQVGRELVGLVNSHGPYAVGFSGEDAGLLRARRTGAVVDGQEVDLGLVGEVTGVDPTAI
+LDVIESGRIPVVSSVAPEINDDGEPTGQVLNVNADTAAAALAAALGAAKLVLLTDVEGLY
+ADWPDRDSLISSLTAAQLRALLPSLASGMIPKMAACLAAVDAGVQRAHVVDGRRPHSMLL
+EVFTSAGVGTQVVPDAEPTAPTTPEEDA
+>4_1333
+MSPHTDPATAAAPVLSTADRLDRAESKAEVLVEALPWIRRFAGTVMVVKYGGNAMVSEEL
+RRAFAEDIVFLHHVGVHPVVVHGGGPQINAMLDRLGIASEFRGGLRVTTEEAMDVVRMVL
+TGQVGRELVGLVNSHGPYAVGFSGEDAGLLRARRTGAVVDGQEVDLGLVGEVTGVDPTAI
+LDVIESGRIPVVSSVAPEIDDDGQPTGQVLNVNADTAAAALAAALGAAKLVLLTDVEGLY
+ADWPDRDSLISSLTAAQLRALLPSLASGMIPKMAACLAAVDAGVQRAHVVDGRRPHSMLL
+EVFTSAGVGTQVVPDAEPTAPTTPEEDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000982.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000982.fa
new file mode 100644
index 0000000000000000000000000000000000000000..58e7c9ef7cec12fba6cd8840a066e0327cd4c93b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000982.fa
@@ -0,0 +1,40 @@
+>0_1442
+MKERIILAYSGGLDTSVAIGWIAEATGAEVVAVAVDVGQGGESLETIRQRALDCGAVEAY
+VADARDEFAEQYCMPTLKANALYMDAYPLVSAISRPVISRHLVAAARQFGASTVAHGCTG
+KGNDQVRFEVSIQTLGPDLKCIAPVRDLALTRDKAIDYAERNELPIVTTKKNPFSIDQNV
+WGRAVETGFLEDIWNGPTKDVYDYTDDPAFSPAPDVVTIAFERGVPTALDGRALSSLEII
+EELNRRAGAQGVGRIDIVEDRLVGIKSREIYEAPGAMALIAAHRELENVTLEREQARFKK
+TVDQRWTELVYDGQWFSPLKRNLDTFIDATQEHVNGEIRLELHGGRATVQGRRSETGLYD
+FNLATYDEGDSFDQSSARGFIDIFGLSAKTASERDQRLRGGDDLKDVARLANS
+>1_1379
+MKERIILAYSGGLDTSVAIGWIAEATGAEVVAVAVDVGQGGESLETIRQRALDCGAVEAY
+VADARDEFAEQYCMPTLKANALYMDAYPLVSAISRPVISRHLVAAARQFGASTVAHGCTG
+KGNDQVRFEVSIQTLGPDLKCIAPVRDLALTREKAIEYAQRNDLPIVTTKKNPFSIDQNV
+WGRAVETGFLEDIWNGPTKDVYDYTDDPAFPPAPDVVTIAFERGVPTALDGRALSPLEII
+EELNRRAGAQGVGRIDIVEDRLVGIKSREIYEAPGAMALIAAHRELENVTLEREQARFKK
+HVDQRWTELVYDGQWYSPLKRNLDTFIDATQEHVNGEIRLELHGGRATVQGRRSETGLYD
+FNLATYDEGDSFDQSSARGFIDIFGLSAKTASEREQRLRGSDDLQDVARLSND
+>2_1349
+MKDRIVLAYSGGLDTSVAIGWIGEATGAEVVAVAVDVGQGGESLETIRQRALDCGAVEAY
+VADARDEFAEQYCMPTLKANALYMDAYPLVSAISRPVISRHLVAAARQFGASTVAHGCTG
+KGNDQVRFEVSIQTLGPDLKCIAPVRDLALTREKAIEYAERNELPIATTKKNPFSIDQNV
+WGRAVETGFLEDIWNGPTKDVYDYTDDPAFPPAPDVVTIAFEQGVPTALDGRALSALEII
+EELNRRAGAQGVGRIDIVEDRLVGIKSREIYEAPGAMALIAAHRELENVTLEREQARFKK
+QVDQRWTELVYDGQWFSPLKKSLDTFIDDTQKHVNGEIRLELHGGRATVQGRRSETGLYD
+FNLATYDEGDSFDQSSARGFIDIYGLSAKTASEREQRLGGAADLADVARLSND
+>3_1120
+MKERIILAYSGGLDTSVAIGWIAEATGAEVVAVAVDVGQGGESLETIRQRALDCGAVEAY
+VADAREEFAEQYCMPTLKANALYMDAYPLVSAISRPVISRHLVAAARQFGASTVAHGCTG
+KGNDQVRFEVSIQTLGPDLKCIAPVRDLALTREKAIEYAERNDLPIVTTKKNPFSIDQNV
+WGRAVETGFLEDIWNGPTKDVYDYTDDPAFPPAPDVVTIAFERGVPTALDGRALSPLEII
+EELNRRAGAQGVGRIDIVEDRLVGIKSREIYEAPGAMALIAAHRELENVTLEREQARFKK
+QVDQRWTELVYDGQWYSPLKRNLDTFIDATQEHVNGEIRLELHGGRATVQGRRSETGLYD
+FNLATYDEGDSFDQSSARGFIDIFGLSAKTASEREQRLRGGDDLQDVARLSND
+>4_1328
+MKERIILAYSGGLDTSVAIGWIAEATGAEVVAVAVDVGQGGESLETIRQRALDCGAVEAY
+VADARDEFAEQYCMPTLKANALYMDAYPLVSAISRPVISRHLVAAARQFGASTVAHGCTG
+KGNDQVRFEVSIQTLGPDLKCIAPVRDLALTREKAIEYAERNDLPIVTTKKNPFSIDQNV
+WGRAVETGFLEDIWNGPTKDVYDYTDDPAFPPAPDVVTIAFERGVPTALDGRALSPLEII
+EELNRRAGAQGVGRIDIVEDRLVGIKSREIYEAPGAMALIAAHRELENVTLEREQARFKK
+HVDQRWTELVYDGQWYSPLKRNLDTFIDATQEHVNGEIRLELHGGRATVQGRRSETGLYD
+FNLATYDEGDSFDQSSARGFIDIFGLSAKTASEREQRLRGGDDLQDVARLSND
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000993.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000993.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c3d48968b5a179f1c8ecbe0be3a187951007ae92
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0000993.fa
@@ -0,0 +1,40 @@
+>0_1454
+MTETEIKKGLAGVVVDTTAISKVNPDTNSLLYRGYPVQDLAAKLPFESVALLLWNGELPT
+DEELAEFQRFERAHRALDPKVKQAIDLLPTDCHPMDVGRTAVSVLGANHPKAEDSSPEAE
+LEKAKALFAAFPAAVAYDQRRRRGQDVVEPREDLDYSQNFLWMTFGEEAAPEVVDAFRVS
+MVLYAEHSFNASTFTARVITSTLSDLHSAVTGAIGALKGPLHGGANEAVMHTFDEIGIRK
+EESREDAAARAKAWMEDALAQKKKVMGFGHRVYKNGDSRVPTMKAALDRMIEHYGREEML
+GLYDGLQSAMDEAKQIKPNLDYPAGPTYHLMGFDTEMFTPLFIASRITGWTAHIMEQRAA
+NALIRPLSSYDGPEQRELPAG
+>1_1367
+MTETEIKKGLAGVVVDTTAISKVNPETNSLLYRGYPVQDLAAQLSFEAVALLLWTGELPT
+DEELAAFEHFERAHRALDPKVKQAIDLLPTDCHPMDVGRTAVSVLGANHPKAEDSSPEAE
+LEKAQALFAAFPAVVAYDQRRRRGQDVVEPREDLDYSQNFLWMTFGEEAAPEVVDAFRVS
+MVLYAEHSFNASTFTARVITSTLSDLHSAVTGAIGALKGPLHGGANEAVMHTFDEIGIRK
+EESRQDAAARAKAWMEDALAQKKKVMGFGHRVYKNGDSRVPTMKAALDRMIEHYGREEML
+GLYDGLQSAMDEAKQIKPNLDYPAGPTYHLMGFDTEMFTPLFIASRITGWTAHIMEQRAA
+NALIRPLSAYDGPEQRELPAG
+>2_1361
+MTETEIKKGLAGVVVDTTAVSKVNPETNSLLYRGYPVQDLAAQLPFEAVALLLWNGELPT
+DAELEEFQRFERAHRALDPEVKAAVDLLPTDCHPMDVGRTAVSVLGANHPKAEDSSPEAE
+LEKAKALFAAFPAVVAYDQRRRRGQEVVEPRADLDYAQNFLWMSFGEEAAPEVVDAFRVS
+MVLYAEHSFNASTFTARVITSTLSDLHSAVTGAIGALKGPLHGGANEAVMHTFDEIGIRK
+EESREDAAARAKAWMEDALAQKKKVMGFGHRVYKNGDSRVPTMKAALDRMIEHYGREEML
+GLYDGLEQAMDEAKQIKPNLDYPAGPTYHLMGFDTEMFTPIFIAARITGWTAHIMEQRAA
+NALIRPLSAYNGPEQRELPGK
+>3_1107
+MTETEIKKGLAGVVVDTTAISKVNPETNSLLYRGYPVQDLAAQLPFEAVALLLWTGELPT
+DEELTAFERFERTHRALDPKVKQAIDLLPTDCHPMDVGRTAVSVLGANHPKAEDSSPEAE
+LEKAQALFAAFPAVVAYDQRRRRGQEVVEPREDLDYSQNFLWMTFGEEAAPEVVDAFRVS
+MVLYAEHSFNASTFTARVITSTLSDLHSAVTGAIGALKGPLHGGANEAVMHTFDEIGIRK
+EESREDAAARAKAWMEDALAQKKKVMGFGHRVYKNGDSRVPTMKAALDRMIEHYGREEML
+GLYDGLEQAMDEAKQIKPNLDYPAGPTYHLMGFDTELFTPIFIASRITGWTAHIMEQRAA
+NALIRPLSAYDGPEQRELPAG
+>4_1316
+MTETEIKKGLAGVVVDTTAISKVNPETNSLLYRGYPVQDLAAQLSFEAVALLLWTGELPT
+DEELAAFERFERAHRALDPKVKQAIDLLPTDCHPMDVGRTAVSVLGANHPKAEDSSPEAE
+LEKAQALFAAFPAVVAYDQRRRRGQDVVEPREDLDYSQNFLWMTFGEEAAPEVVDAFRVS
+MVLYAEHSFNASTFTARVITSTLSDLHSAVTGAIGALKGPLHGGANEAVMHTFDEIGIRK
+EESREDAAARAKAWMEDALAQKKKVMGFGHRVYKNGDSRVPTMKAALDRMIEHYGREEML
+GLYDGLEQAMDEAKQIKPNLDYPAGPTYHLMGFDTELFTPIFIASRITGWTAHIMEQRAA
+NALIRPLSAYDGPEQRELPAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001003.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001003.fa
new file mode 100644
index 0000000000000000000000000000000000000000..aead844d71c0bfd54b1753da875af830b5b47780
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001003.fa
@@ -0,0 +1,20 @@
+>0_1482
+MSSIPEGLKYSAEHEWIAEAGQAGTVRIGITDFAQDALGDVVYVDLPEVGSEVTAGTAVG
+EVESTKSVSDIYAPVTGTVAAVNEDLDGEPGLVNSAPYEGGWLFEVTLADEAQLEGLLDA
+EGYASHTS
+>1_1332
+MSSIPEGLKYSAEHEWIAEAGAAGTVRVGITDFAQDALGDVVYVDLPEVGTEVTAGTAVG
+EVESTKSVSDIYAPVSGTVAAVNDELDGEPGLVNSAPYEGGWLFEITLADEAQLEGLMDA
+EGYASHTS
+>2_1377
+MSSIPEGLKYSTDHEWAQDAAEPGVVRVGITDFAQDALGDVVYVDLPSVGDEVTAGAAIG
+EVESTKSVSDIMAPVSGTVTAVNEELDGEPALVNSAPYEGGWLVEIKLSDPAEVDGLLDA
+AGYAAHVG
+>3_1061
+MSSIPEGLKYSAEHEWIAKAGAAGTVRVGITDFAQDALGDVVYVDLPEVGTEVTAGTAVG
+EVESTKSVSDIYAPVSGTVAAVNDELDGEPGLVNSAPYEGGWLFEITLADEAQLEGLMDA
+EGYASHTS
+>4_1286
+MSSIPEGLKYSAEHEWIAEAGAAGTVRVGITDFAQDALGDVVYVDLPEVGTEVTAGTAVG
+EVESTKSVSDIYAPVSGTVAAVNDELDGEPGLVNSAPYEGGWLFEITLADEAQLEGLMDA
+EGYASHTS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001007.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001007.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9873bd37cf138d9309fcf8349ffc666352fdf753
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001007.fa
@@ -0,0 +1,25 @@
+>0_1486
+MTPTAGSGRPPALGAQGTLFDEDVTPGDDVGFRGPTACKAAGITYRQLDYWARTDLVVPT
+VRGAAGSGSQRLYSFRDILVLKVVKRLLDTGVSLQQIRTAVGHLRERGVEDLAQITLMSD
+GASVYECTSADEVVDLVQGGQGVFGIAVGRVWREVEGSLAELPRESVIVAPEPGDELAGR
+RRARRSA
+>1_1328
+MTPTAGPGRPPALGAQGTLFDEGRTQGDDVGFRGPTACKAAGITYRQLDYWARTDLVAPT
+VRSASGSGSQRLYSFRDILVLKVVKRLLDTGVSLQQIRTAVGHLRERGVEDLAQITLMSD
+GASVYECTSADEVVDLVQGGQGVFGIAVGRVWREVEGSLAELPRESVVGAPEPGDELAGR
+RRARRSA
+>2_1381
+MTPHAGPGLPLGIDGRQGRLFDVDALAPGGDVGYRGPTACKAAGITYRQLDYWARTDLVV
+PTVRGASGSGTQRLYSFRDILVLKVVKRLLDTGVSLQQIRTAVAHLRERGVDDLAQITLM
+SDGASVYECTSPDEVVDLVQGGQGVFGIAVGRVWREVEGSLAELPGEVLGDDHAPEDELS
+ARRRARRPARTAS
+>3_1057
+MTPTAGPGRPPALGAQGTLFDEGRTQGDDVGFRGPTACKAAGITYRQLDYWARTDLVAPT
+VRSASGSGSQRLYSFRDILVLKVVKRLLDTGVSLQQIRAAVGHLRERGVEDLAQITLMSD
+GASVYECTSADEVVDLVQGGQGVFGIAVGRVWREVEGSLAELPRESVVGAPEPGDELAGR
+RRARRSA
+>4_1282
+MTPTAGPGRPPALGTQGTLFDEGATRGDDVGFRGPTACKAAGITYRQLDYWARTDLVVPT
+VRSASGSGSQRLYSFRDILVLKVVKRLLDTGVSLQQIRTAVGHLRERGVEDLAQITLMSD
+GASVYECTSADEVVDLVQGGQGVFGIAVGRVWREVEGSLAELPRESVVGAPEPGDELAGR
+RRARRSA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001008.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001008.fa
new file mode 100644
index 0000000000000000000000000000000000000000..37ecd78172e93a533b056f2129669ba70c3854d8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001008.fa
@@ -0,0 +1,105 @@
+>0_1487
+MTAPVENFTPPEDAAGSTGAGAVFSKVLVANRGEIAVRAFRACYELGARTVAVFPYEDRN
+SIHRQKADEAYRIGEEGHPVRAYLDVDEIIRVAKDAGADAIYPGYGFLSENAGLARAAAE
+NGITFVGPPADVLELTGNKVEALRAAKRAGIPTLASSDPSADVEWLLEQAEEIGFPIFVK
+AVAGGGGRGMRRVERREDLRGSLEAAMREADTAFGDPTVFLEQAVLRPRHIEVQILADGE
+GNVVHLFERDCSLQRRHQKVIEMAPAPNLDEEIRQALHRDAVAFAKEMGYVNAGTVEFLV
+DTAGERAGQHVFIEMNPRIQVEHTVTEEVTDVDLVGAQLRIAAGATLPELGITQDALQVR
+GFAIQCRITTEDPANGFRPDTGTITAYRSAGGSGVRLDGGTIYAGAEISPHFDSMLVKLT
+CRGRDYATAVRRVRRALAEFRVRGVATNIPFLMNVMDDPQFVSGDVATDFIDKHPELATV
+NRSQDRGSKALQYLVDVTVNQPHGPRVEGIDPRDRLPEHPGDKHQEPDRSPFDGPSRNED
+AVPPHGWRQVLLEQGPEGFARTLREQTALAVTDTTFRDAHQSLLATRVRTRDLLAAAPAV
+AHTLPGLLSVEAWGGATYDVALRFLHEDPWQRLELLRAELPNIPIQMLLRGRNTVGYTPY
+PTEVTDAFVAEAAASGVDVFRIFDALNDVSQITPAIEAVRATGTAVAEAALCYTGNMTDP
+AEKLYTLDYYLGLARQMVDAGAHVLAIKDMAGLLRPAAARELVTALRAEFELPVHLHTHD
+TAGGQLATLLAAAEAGVDAVDAATASMAGTTSQVPLSALVAALEHTERDTGLGLEAATAM
+EPYWESVRAAYAPFEAGLPAPTGRVYHHEIPGGQLSNLRTQAIALGLGERFEAIESMYAA
+ADDLLGHLVKVTPSSKVVGDLALQLVGSGVDPKQFAERPQEFDIPDSVIGFLRGELGDPP
+GGWPEPFRTKALQGRREGAGMVEISAEDSTALGEAGQTRRAVLNRLLFPGPTKEFEAHRE
+EFGDTVTLHTRDFLYGLVPGREHVISLGRGVRLLATLMSVSEPDEKGMRTVMVTLNGQLR
+QMTVRDRSIESTVRTAEKADPGTPGHVAAPFAGSVTVQVAEGDAVEVGQPVATIEAMKME
+AAITAQVAGTVRRVVTEGVTPVNGGDLLLVIE
+>1_1327
+MTAPVENFTPPEDAAGSTGAGAVFSKVLVANRGEIAVRAFRACYELGARTVAVFPYEDRN
+SIHRQKADEAYRIGEEGHPVRAYLDVDEIIRVAKDAGADAIYPGYGFLSENAGLARAAAE
+NGITFVGPPADVLELTGNKVEALRAAKRAGIPTLASSDPSADVEWLLEQAEEIGFPIFVK
+AVAGGGGRGMRRVERREDLRGSLEAAMREADTAFGDPTVFLEQAVLRPRHIEVQILADGE
+GNVVHLFERDCSLQRRHQKVIEMAPAPNLDEEIRQALHRDAVAFAKEMGYVNAGTVEFLV
+DTAGERAGQHVFIEMNPRIQVEHTVTEEVTDVDLVSAQLRIAAGATLPELGITQDALQVR
+GFAIQCRITTEDPANGFRPDTGTITAYRSAGGSGVRLDGGTIYAGAEISPHFDSMLVKLT
+CRGRDYATAVRRVRRALAEFRVRGVATNIPFLMNVMDDPQFLSGDVATDFIDKHPELATV
+NRSQDRGSKALQYLVDVTVNQPHGPRVEGIDPRDRLPEHPGDKHQEPDRSPFDGPSRNED
+AVPPHGWRQVLLEQGPEGFARTLREQTALAVTDTTFRDAHQSLLATRVRTRDLLAAAPAV
+AHTLPGLLSVEAWGGATYDVALRFLHEDPWQRLELLRAELPNIPIQMLLRGRNTVGYTPY
+PTEVTDAFVAEAAASGVDVFRIFDALNDVEQITPAIEAVRATGTAVAEAALCYTGNMTDP
+KETLYTLDYYLGLARRMVDAGAHVLAIKDMAGLLRPAAARELVTALRAEFDLPVHLHTHD
+TAGGQLATLLAAAEAGVDAVDAATASMAGTTSQVPLSALVAALEHTERDTGLGLEAATAM
+EPYWESVRSAYAPFEAGLPAPTGRVYHHEIPGGQLSNLRTQAIALGLGERFEAIESMYAA
+ADDLLGHLVKVTPSSKVVGDLALQLVGSGVDPKEFAERPQEFDIPDSVIGFLRGELGDPP
+GGWPEPFRTKALQGRREGAGMVEISAEDSSALGEAGQTRRGVLNRLLFPGPTKEFEAHRE
+EFGDTVTLHTRDFLYGLVPGREHVISLGRGVRLLATLMSVSEPDEKGMRTVMVTLNGQLR
+QMTVRDRSIESTVRTAEKADPGTPGHVAAPFAGSVTVQVAEGDAVEVGQAVATIEAMKME
+AAITAQVAGTVRRVVTEGITPVNGGDLLLVIE
+>2_1382
+MSLPLDPDTTRNGAGRPAHAAAPAFSKVLVANRGEIAVRAFRACHELGARTVAVFPHEDR
+NSIHRQKADEAYRIGQEGHPVRAYLDVDEILRVAKDVGADAIYPGYGFLSENAGLARAAA
+EAGITFVGPPADVLELTGNKVEALRAAKRAGIPTLKSSDPSSDVEWLLGQAEEIGFPIFV
+KAVAGGGGRGMRRVERPEDLKDSLEAAMREADTAFGDPTVFLEQAVLRPRHIEVQVLADA
+EGNVVHLFERDCSLQRRHQKVIEMAPAPHLDEEIRQALHRDAVAFAKEMGYVNAGTVEFL
+VDTAGERAGQHVFIEMNPRIQVEHTVTEEVTDVDLVAAQLRIAAGATLEELGIRQEDLHV
+RGFAIQCRITTEDPANGFRPDTGTITAYRSAGGSGVRLDGGTIYAGAEISPHFDSMLVKL
+TCRGRDYETAVRRVRRALAEFRVRGVTTNIPFLMNVMDDPQFVAGDVATDFIDKHPELAM
+VNRSQDRGSKALQYLADVTVNKPHGERVDGIDPRDRLPGHPSDKRHEPDRSPFDGPSRNP
+GAVPPAGWRQVLAEQGPEGFARTLREQTALAVTDTTFRDAHQSLLATRVRTRDLLAAAPA
+VAHTLPGLLSVEAWGGATYDVALRFLHEDPWQRLELLRAELPNIPIQMLLRGRNTVGYTP
+YPTEVTDAFVQEAAATGVDVFRIFDALNDVEQIIPAIAAVRATGTAVAEAALCYTGNMTD
+PAEELYTLEYYLGLARRMVDAGAHVLAIKDMAGLLRPAAAKELVGALRAEFDLPVHLHTH
+DTAGGQLATLLAASEAGVDAVDVAVASMAGTTSQAPMSALVAALEHTERDTGLTLEAAAA
+MEPYWESVRAIYAPFEAGLKAPTGRVYQHEIPGGQLSNLRTQAIALGLGERFEQVEAMYA
+AADDILGHLVKVTPSSKVVGDLALQLVGGGVDPDQFRERPEDFDIPDSVVGFLRGELGDP
+PGGWPEPFRTRALKGRREGSGMVQVSEEDAAALAEAGQGRRDVLNRLLFPGPTKEYEAHR
+EEFGDISTLHTRDFLYGLVPGREHVVSLGRGVRLIATLQSVSEPDEKGMRTAMLTLNGQL
+RQIQVRDRSVESSVRQAEKADAAVPGQVPAPFAGSVTVQAAVGDVVEQGAPVATIEAMKM
+EAAITAPVSGTVTRVVTQGVTPVQGGDLLLVIE
+>3_1056
+MTAPVENFTPPEDAAGSTGAGAVFSKVLVANRGEIAVRAFRACYELGARTVAVFPYEDRN
+SIHRQKADEAYRIGEEGHPVRAYLDVDEIIRVAKDAGADAIYPGYGFLSENAGLARAAAE
+NGITFVGPPADVLELTGNKVEALRAAKRAGIPTLASSDPSADVEWLLEQAEEIGFPIFVK
+AVAGGGGRGMRRVERREDLRGSLEAAMREADTAFGDPTVFLEQAVLRPRHIEVQILADGE
+GNVVHLFERDCSLQRRHQKVIEMAPAPNLDEEIRQALHRDAVAFAKEMGYVNAGTVEFLV
+DTAGERAGQHVFIEMNPRIQVEHTVTEEVTDVDLVGAQLRIAAGATLPELGITQDALQVR
+GFAIQCRITTEDPANGFRPDIGTITAYRSAGGSGVRLDGGTIYAGAEISPHFDSMLVKLT
+CRGRDYATAVRRVRRALAEFRVRGVATNIPFLMNVMDDPQFVSGDVATDFIDKHPELATV
+NRSQDRGSKALQYLVDVTVNQPHGPRIEGIDPRDRLPEHPGDKHQEPDRSPFDGPSRNED
+AAPPHGWRQVLLEQGPEGFARTLREQTALAVTDTTFRDAHQSLLATRVRTRDLLAAAPAV
+AHTLPGLLSVEAWGGATYDVALRFLHEDPWQRLELLRAELPNIPIQMLLRGRNTVGYTPY
+PTEVTDAFVAEAAASGVDVFRIFDALNDVEQITPAIEAVRATGTAVAEAALCYTGNMTDP
+KETLYTLDYYLGLARRMVDAGAHVLAIKDMAGLLRPAAARELVTALRAEFDLPVHLHTHD
+TAGGQLATLLAAAEAGVDAVDAATASMAGTTSQVPLSALVAALEHTERDTGLGLEAATAM
+EPYWESVRSAYAPFEAGLPAPTGRVYHHEIPGGQLSNLRTQAIALGLGERFEAIESMYAA
+ADDLLGHLVKVTPSSKVVGDLALQLVGSGVDPKEFAERPQEFDIPDSVIGFLRGELGDPP
+GGWPEPFRTKALQGRREGAGMVEISAEDSTALAEAGQTRRAVLNRLLFPGPTKEFEAHRE
+EFGDTVTLHTRDFLYGLVPGREHVISLGRGVRLLATLMSVSEPDEKGMRTVMVTLNGQLR
+QMTVRDRSIESTVRTAEKADPGTPGHVAAPFAGSVTVQVAEGDAVEVGQAVATIEAMKME
+ATITAQAAGTVRRVVTEGVTPVNGGDLLLVIE
+>4_1281
+MTAPVENFTPPEDAAGSTGAGAVFSKVLVANRGEIAVRAFRACYELGARTVAVFPYEDRN
+SIHRQKADEAYRIGEEGHPVRAYLDVDEIIRVAKDAGADAIYPGYGFLSENAGLARAAAE
+NGITFVGPPADVLELTGNKVEALRAAKRAGIPTLASSDPSADVEWLLEQAEEIGFPIFVK
+AVAGGGGRGMRRVERREDLRGSLQAAMREADTAFGDPTVFLEQAVLRPRHIEVQILADGE
+GNVVHLFERDCSLQRRHQKVIEMAPAPNLDEEIRQALHRDAVAFAKEMGYVNAGTVEFLV
+DTAGERAGQHVFIEMNPRIQVEHTVTEEVTDVDLVGAQLRIAAGATLPELGITQDALQVR
+GFAIQCRITTEDPANGFRPDTGTITAYRSAGGSGVRLDGGTIYAGAEISPHFDSMLVKLT
+CRGRDYAMAVRRVRRALAEFRVRGVATNIPFLMNVMDDPQFVSGDAATDFIDKHPELATV
+NRSQDRGSKALQYLVDVTVNQPHGPRIEGIDPRDRLPEHPGDKHQEPDRSPFDGPSRNED
+AAPPHGWRQVLLEQGPEGFARTLREQTALAVTDTTFRDAHQSLLATRVRTRDLLAAAPAV
+AHTLPGLLSVEAWGGATYDVALRFLHEDPWQRLELLRAELPNIPIQMLLRGRNTVGYTPY
+PTEVTDAFVAEAAASGVDVFRIFDALNDVEQITPAIEAVRATGTAVAEAALCYTGSMTDP
+KETLYTLDYYLGLARRMVDAGAHVLAIKDMAGLLRPAAARELVTALRAEFDLPVHLHTHD
+TAGGQLATLLAAAEAGVDAVDAATASMAGTTSQVPLSALVAALEHTERDTGLGLEAATAM
+EPYWESVRSAYAPFEAGLPAPTGRVYHHEIPGGQLSNLRTQAIALGLGERFEAIESMYAA
+ADDLLGHLVKVTPSSKVVGDLALQLVGSGVDPKEFAERPQEFDIPDSVIGFLRGELGDPP
+GGWPEPFRTKALQGRREGAGMVEISAEDSSALAEAGQTRRAVLNRLLFPGPTKEFEAHRE
+EFGDTVTLHTRDFLYGLVPGREHVISLGRGVRLLATLMSVSEPDEKGMRTVMVTLNGQLR
+QMTVRDRSIESTVRTAEKADPGTPGHVAAPFAGSVTVQVAEGDAVEVGQAVATIEAMKME
+ATITAQAAGTVRRVVTEGVTPVNGGDLLLVIE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001019.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001019.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4e62b2a3366d8037994969e6337096ea7a90eff2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001019.fa
@@ -0,0 +1,20 @@
+>0_1500
+MFLGTYTPRLDEKSRLILPAKFREELAEGLVLTRGQERCVYVFSAREFERVHEQMRSAPL
+SSRQARDYIRVFLSGASDEVPDKQGRVTVPAPLRQYAGLDRDVTVIGAGTRVEIWDSESW
+NAYLAEQEAAFSETDEDVLPGVF
+>1_1315
+MFLGTYTPRLDEKSRLILPAKFREELAEGLVLTRGQERCIYVFSAREFERVHEQMRSAPL
+SSRQARDYIRVFLSGASDEVPDKQGRVTVPAPLRQYAGLDRDVTVIGAGTRVEIWDSESW
+NTYLAEQEAAFSETDEDVLPGVF
+>2_1395
+MFLGTYTPRLDEKWRLILPAKFREELADGLVLTRGQERCVYVFSAAEFERVHEQLRSAPL
+SSRQARDYIRVFLSGASDETPDKQGRITVPSPLRQYAGLDRDVTVIGAGTRAEIWDTAAW
+AAYLAEQEAAFSETDEDVLGGIL
+>3_1044
+MFLGTYTPRLDEKSRLILPAKFREELAEGLVLTRGQERCVYVFSAREFERVHEQMRSAPL
+SSRQARDYIRVFLSGASDEVPDKQGRVTVPAPLRQYAGLDRDVTVIGAGTRVEIWDSESW
+NTYLAEQEAAFSETDEDVLPGVF
+>4_1269
+MFLGTYTPRLDEKSRLILPAKFREELAEGLVLTRGQERCIYVFSAREFERVHEQMRSAPL
+SSRQARDYIRVFLSGASDEVPDKQGRVTVPAPLRQYAGLDRDVTVIGAGTRVEIWDSESW
+NTYLAEQEAAFSETDEDVLPGVF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001022.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001022.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6b98e1c4807ff95a8e6ce8e20ffd5d637bf18762
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001022.fa
@@ -0,0 +1,57 @@
+>0_1503
+MTDRPAFSSPRGGSTVGPAPGLPDARIRGLLLLVLVLLGGLALRLVYVQGVDPTGQAAAA
+MDKRLTHQETLPERGSILDRDGDVLASSVRRYDMVVDQRLVKDFNEWDREARKTVLVDVD
+SRLASLAEVLELPEEQVREATIGSRPYNVVKRSVTPEMRDAAMALKVPGLLAEPVDRRVY
+PNGSVAGSIVGFMGGDGTPLEGLELSQDDVMTGTPGTRTFEVGADGIRIPNAPLEEVPAV
+DGADLRLTLDKDAQWFAQETMGALAAEHDAEWANAVVLDAKTGDVLVMADSTTVDPADPE
+GTEPYFRSSTVMSTPYEPGSTGKALPIAAALDAGAVTATDGYTVPSSQEFDGQTIRDFAP
+HETYDMTVAGIFARSYNTGTVQVAEEISDELRYEYMRSFGVGKPIDLGLPRTAGGVLVPP
+GEWDGRQRLTTAFGQGYTQTTLHTAQMYQAMANGGVMEPARLIDATVDGDGAEKRWEPAA
+EPHRVVSEATAADMLRMMETVVTQGTSKAAAIPGYRVGGKSSTAEAASDTGRYDGYNFGF
+TAVAPLDDPRFVVSVSMHRPPSQLGSRAVTSAAAQIMEHMLRQADVPADGAAPQDYDVFV
+DDPQDRPW
+>1_1312
+MRTRILLLLVFVLLGGLALRLVYVQGIDPTGQAAAAMDQRLTHQETLPQRGSILDRDGDV
+LAASVRRYDIVVDQRLVKDFNEWDREARETVLVDVDSRLASLAEVLGMSEEEVREATIGS
+RPYAVVRRSVTPEVRDAAMALNVPGLLSEAVDRRTYPNGSVAGSIIGFMGGDGTALEGLE
+LSQDDVMTGTPGTRTFEVGADGIRIPNAPLEEVPAVDGADLRLTVDKDAQWFAQETLGAL
+AAEYEAEWANAVVMDVKTGDVIVMADSTTVDPADPDATEGNFRTSTVMSTPYEPGSTGKA
+LPIAAAVDAGKVTATDGFTVPGSQDFDGQTIRDFSPHPTFDMTVAGIYARSYNTGTVQIA
+EKITDEQRYEYMRSFGVGQPIDLGLPQQAGSVLVPPEQWDGRQRLTTAFGQGYTQTTLHT
+AQMYQALANGGVLIPARLIDATVDGDGAEKRWESSAEPHRVVSEETAAQMLRMMETVVTQ
+GTSKAAAIPGYRVGGKSSTAEAASDTGTYDGYNLGFTAVAPLDDPRFVVSVSMHRPPSKQ
+GSRDVSVAAATIMEYMLRQADVPATGAEPNDYRVFVDDPQDRPW
+>2_1398
+MPVSRSRVSGAGSRTAPPIGTARVRSRTVLLLLLALVTVLGLRLVWVQGIDASGAAATAM
+SERLKTQEIRPERGAITDRDGAVLASTVRRYDIVVDQRLVKDFKEWDAEKRQSVLVSIDS
+RLSSLAEALGMSEDEVRAAAIGDRPWAVLKRSVTPEVRDRVLALKVPGVLADAVDRRTYP
+SGAVAGSLVGFMSSDGTPLEGLEKSQDAVLSGTPGTRTFEVGATGIRIPNAPEDVTPAVD
+GATLRLTLDKDAQWYAQEAMARLADTYSAQWANAVVMDAKTGEVLALADSATVDPGDPQA
+ADARARTPGVVYTPYEPGSTGKTATMAAALDMGLVTPETGLEVPDRLELKGQPPIRDASP
+HETYTMTVAGVYARSYNTGTVMVAEKMSDEQRYEYMRSFGIGRPIDLGLPQPARSVLAAP
+GDWDGRQRLVTAFGQGYTVTTLHTAQMFQAIANGGVLEPARLIAATVGADGTEHRWDPGV
+ASRRVVSEQTAEEMLRMMETVVTQGTSTVAQLPGYRVGGKSSTAQVAGETGTYDGYNYGF
+TAVAPLDDPRYVVSVSMNRPSAGGSSKVVAAAAADVMQHMLRQGGVPPGGAEPDDYRVFV
+DDPQERPW
+>3_1041
+MRTRILLLLVLVLLGGLALRLVYVQGIDPTGQAAAAMDQRLTHQETLPQRGSILDRDGDV
+LAASVRRYDIVVDQRLVKDFNEWDREARETVLVDVDSRLASLAEVLGMSEEEVREATIGS
+RPYAVVRRSVTPEVRDAAMALNVPGLLSEAVDRRTYPNGSVAGSIIGFMGGDGTALEGLE
+LSQDDVMTGTPGTRTFEVGADGIRIPNAPLEEVPAVDGADLRLTVDKDAQWFAQETLGAL
+AAEYDAEWANAVVMDVKTGDVIVMADSTTVDPADPDATEGNFRTSTVMSTPYEPGSTGKA
+LPIAAAVDAGKVTATDGFTVPSSQDFDGQTIKDFSPHPTFDMTVAGIYARSYNTGTVQIA
+EKITDEQRYEYMRSFGVGQPIDLGLPQQAGSVLVPPEKWDGRQRLTTAFGQGYTQTTLHT
+AQMYQALANGGVLIPARLIDATVDGEGAEKRWESSAEPHRVVSEETAAQMLRMMETVVTQ
+GTSKAAAIPGYRVGGKSSTAEAASDTGTYDGYNFGFTAVAPLDDPRFVVSVSMHRPPSKQ
+GSRDVSVAAATIMEYMLRQADVPATGAEPNDYRVFVDDPQDRPW
+>4_1266
+MRTRILLLLVFVLLGGLALRLVYVQGIDPTGQAAAAMDQRLTHQETLPQRGSILDRDGDV
+LAASVRRYDIVVDQRLVKDFNEWDREARETVLVDVDSRLASLAEVLGMSEEEVREATIGS
+RPYAVVRRSVTPEVRDAAMALNVPGLLSEAVDRRTYPNGSVAGSIIGFMGGDGTALEGLE
+LSQDDVMTGTPGTRTFEVGADGIRIPNAPLEEVPAVDGADLRLTVDKDAQWFAQETLGAL
+AAEYEAEWANAVVMDVKTGDVIVMADSTTVDPADPDATEGNFRTSTVMSTPYEPGSTGKA
+LPIAAAVDAGKVTATDGFTVPGSQDFDGQTIRDFSPHPTFDMTVAGIYARSYNTGTVQIA
+EKITDEQRYEYMRSFGVGQPIDLGLPQQAGSVLVPPEQWDGRQRLTTAFGQGYTQTTLHT
+AQMYQALANGGVLIPARLIDATVDGDGAEKRWESSAEPHRVVSEETAAQMLRMMETVVTQ
+GTSKAAAIPGYRVGGKSSTAEAASDTGTYDGYNLGFTAVAPLDDPRFVVSVSLHRPPSKQ
+GSRDVSVAAATIMEYMLRQADVPATGAEPNDYRVFVDDPQDRPW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001025.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001025.fa
new file mode 100644
index 0000000000000000000000000000000000000000..75c1331c077f8ef6396e33e6fb8d7e6525561fb1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001025.fa
@@ -0,0 +1,50 @@
+>0_1506
+MSASENTALVPVRRPLADTGRTAALTSWDAEGWAGLRVVVAGLGVTGFSVADTLAELGAV
+VVVVDGNDGPENQARAETLRIVGVHEVLLDAEATQSLPEVDGAPAELVVTSPGWRPDQPL
+LMAAHAAGLPIWSDVELAWRVRERAGRPTADWVCLTGTNGKTTTVTMVEAILRADGRRAI
+ACGNVGTPVLDAIRDPEGYDVLALELSSFQLHWTHRVAPASSAVLNLAEDHVDWHGSMEE
+YAAAKGKVYENTRVACVFNEHDPVTRTLVERADVQDGCRAVGFTTDTPGLSDVGVVDGIL
+VDRAFTENRRHEAIALAERTDLGPVAPRHTMANAAAAAALTRAVGVAPAAVAEGLRSYDR
+GEHRIQLVATSRDVMWVNDSKATNPHAADASLAAFTSVVWIAGGLPKGVTYEELVGAHAH
+RLRAVVLLGTDASALRSALAAHAPDVPVHAPLADADGTGPADGAAVMAEAVRVADGLARP
+GDTVLMAPAAASMDQFRSYAQRGEAFIDAVAALMREHGWDTDAGTAAP
+>1_1308
+MTGPASDAAPAPVRRPRADTARTADLTSWDAPGWAGLRVVVTGLGLTGFSVADTLAELGA
+AVVVVEGDDGPENRARAETLRIVGVREVLLDRAATQALPEVDGAAADLVVTSPGWRPDQP
+LLMAAHAAGLPIWSDVELAWRLRERAGRKTADWVCLTGTNGKTTTVTMVEAILRADGRRA
+VACGNVGTPVLDAIRDPQGFDVLALELSSFQLHWTHGLAPASSAVLNLAEDHVDWHGSME
+EYAAAKGKVYANTRVACVFNEQDPLTRTLVERADVQEGCRAIGFTTDTPGLSDIGVVDGI
+LVDRAFLDNRRHEAIALAERADLGPVAPRHTVANAAAAAALTRAVGVSPAAVAEGLRSYD
+RGEHRIQLVATSRDVMWVNDSKATNPHAADASLAAFSSVVWLAGGLPKGVTYHELVAAHA
+HRLRAVVLLGRDTSALRAALAAHAPEVPVHAPLAAADGTGPADGAAVMAEAVRVADGLAR
+PGDIVLMAPAAASMDQFRSYAARGDAFIEAVAGLMREHGWDVHDDAAPDAD
+>2_1402
+MSAPVMRPHADTDRTRGLRTWDDAGWAGLRVVVTGLGVSGFSAADTLAELGARVVVVDGR
+DSPENRAKADTLRIVGVADVLLSEDATHSLPEVDGERPDLVVTSPGWRPDQPLLMAAHEA
+GLPIWSDVELAWRLRERAGRRTADWVCLTGTNGKTTTVTMVEAILRADGRRALACGNVGT
+PVLDAVRDPEGFDTLAVELSSFQLHWTHSIVPASSAVLNLAEDHVDWHGSMEEYAAAKGK
+VYERTTVACVFNEADALTRTLVERADVAEGCRAVGFTTDTPGLSDVGVVDGIIVDRAFLE
+NRRHEAIALAERSDLGAVAPRHTVANACAAAALTRAVGVSPEAVAEGLRSYDRGEHRIQL
+VATSRDVMWVNDSKATNPHAADASLAAFSSVVWIAGGLPKGVTYDELVSAHAGRLREVIL
+LGTDTSELRRALAAHAPEVPVHAPLADADGHGSPDGRAVMAEAVRLADAHACPGDTVLMA
+PAAASMDQFRSYAERGDAFIAAVAELMREHGWDVDSEADAPA
+>3_1037
+MTGPASAAAPAPVRRPRADTARTADLTSWDAPGWAGLRVVVTGLGVTGFSVADTLAELGA
+AVVVVDGDDGPENRARAETLRIVGVREVLLDRAATQVLPEVDGAAADLVVTSPGWRPDQP
+LLMAAHAAGLPIWSDVELAWRLRERAGRKTADWVCLTGTNGKTTTVTMVEAILRADGRRA
+VACGNVGTPVLDAIRDPQGFDVLALELSSFQLHWTHGLAPASSAVLNLAEDHVDWHGSME
+EYAAAKGKVYANTRVACVFNEQDPVTRTLVERADVQEGCRAIGFTTDTPGLSDIGVVDGI
+LVDRAFLDNRRHEAIALAERADLGPVAPRHTMANAAAAAALTRAVGVSPAAVAEGLRSYD
+RGEHRIQLVATSRDIMWVNDSKATNPHAADASLAAFSSVVWLAGGLPKGVTYHELVAAHA
+HRLRAVVLLGRDTSALRAALAAHAPDVPVHAPLAAADGTGPADGAAVMAEAVRVADGLAR
+PGDTVLMAPAAASMDQFRSYAARGDAFIEAVAGLMREHGWDVHDDAAPDTD
+>4_1262
+MTGPASDAAPAPVRRPRADTARTADLTSWDAPGWAGLRVVVTGLGLTGFSVADTLAELGA
+AVVVVDGDDGPENRARAETLRIVGVREVLLDRAATQVLPEVDGAAADLVVTSPGWRPDQP
+LLMAAHAAGLPIWSDVELAWRLRERAGRKTADWVCLTGTNGKTTTVTMVEAILRADGRRA
+VACGNVGTPVLDAIRDPEGFDVLALELSSFQLHWTHGLAPASSAVLNLAEDHVDWHGSME
+EYAAAKGKVYANTRVACVFNEQDPLTRTLVERADVQEGCRAIGFTTDTPGLSDIGVVDGI
+LVDRAFLDNRRHEAIALAERADLGPVAPRHTMANAAAAAALTRAVGVSPAAVAEGLRSYD
+RGEHRIQLVATSRDIMWVNDSKATNPHAADASLAAFSSVVWLAGGLPKGVTYHELVAAHA
+HRLRAVVLLGRDTSALRAALAAHAPDVPVHAPLAAADGTGPADGAAVMTEAVRVADGLAR
+PGDTVLMAPAAASMDQFRSYAARGDAFIEAVAGLMREHGWDVHDDAAPDTD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001029.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001029.fa
new file mode 100644
index 0000000000000000000000000000000000000000..dbd68cba7c8332b9cfa504da7a4a3ec11ca15b85
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001029.fa
@@ -0,0 +1,30 @@
+>0_1510
+MTPGRGGRPPRPAGPAQPPAGSTVVPFPGRSVRRRRAVRWAVAGAVAALLGALAWVLLFS
+PVLAVDEVDVTGTRHVSAEAVQERLAPLHGVPLPRVGSSAVRELVGDLPGVAEVRVVAHP
+PTRVEAAVREHEARARRGGEAGVDLLLDDGTVLAGVPAERVEGESLPEFSEELSAGPRRD
+REEVAAVLAGLPAPVAERVESVDSSRAGQVRLGLRDGVVLVWGDAEDAELKGTVATAFLE
+GDQHGSRAGGVREVDVSVPTRPITR
+>1_1304
+MRLGRGTPPVAPAGADASTVVRFPGRTARRRRATRWGVAAAVLAVLGALGWVVFFSPVLA
+VDRVEVTGTRHVSAAEVQERLEPVYGVPLSRVGAGRVGELVGGLPGVAEVQTVPRLPTGL
+EVVVREHETRARRDGDDGVQLLLADGTVLTGVPEERLEGEDLPAFSEELAQRAQEERAEV
+AEVLAALPEAVADRVETADSRGPGQVRLALEGGVTLVWGDAQDAGLKGPVAEAFLADERH
+GSAEGGVAEIDVSVPTRPITR
+>2_1406
+MVAFPGRSARERRRRRAGMLAAVFAALALAAWAVFASPLLAVDRIDVTGTRLVDRAAVEE
+RVAPLRGVPLPRIGSSSAGDLLSGMPGVASARTVAVPPTALEVRIEELAPVARSAGGDRA
+QVLLEDGSVLGSVPVSALPGEGEEGGALPSAPEALLTAGPDVRASAATVLRALPDGVRDR
+VRGVDAGSPEQVRLDLGGGRTLVWGDASEPERKAAVAQALLDGLEDARGVREVDVSVPDR
+PVTR
+>3_1033
+MRLGRGTPPVAPAGADASTVVRFPGRTARRRRATRWGVAAAVLAVLTALGWVVFFSPVLA
+VDRVEVTGTRHVSATDVQERLAPVYGVPLSRVGAGRVGELAGGLPGVAEVQTVPRLPTGL
+EVVVREHEARARRDGGDGVQLLLADGTVLTGVPEERLEGEDLPAFSEELAQRVQEERAEV
+AEVLAALPESVADRVETADSRGPGQVRLALEGGVTLVWGDAQDAGLKGSVAEAFLADERH
+GSAEAGVAEIDISVPTRPITR
+>4_1258
+MRLGRGTPPVAPAGADASTVVRFPGRTARRRRATRWGVAAAVLAVLTVLGWVVFFSPVLA
+VDRVEVTGTRHVSATDVQERLEPVYGVPLSRVGAGRVGELVGGLPGVAEVQTVPRLPTGL
+EVAVREHEARARRDGDDGVQLLLADGTVLTGVPEERLEGEDLPAFSEELPQRAQEERAEV
+AEVLAALPESVADRVETADSRGPGQVRLALEGGVTLVWGDAQDAGLKGSVAEAFLADERH
+GSAEGGVAEIDVSVPTRPITR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001040.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001040.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fbb30a87e095fbd8429d2b24196195e77718b121
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001040.fa
@@ -0,0 +1,35 @@
+>0_1522
+MSHRQSTASPSSHNGPRPEGPAAPQPGSLAPVGTLTPGAPSPAPPVPASIPRPEYVGRAT
+ADEGNASDVYDAAGIERIRAAGRLAARAMEHTAAYIRPGVTTDELDRIAHAYLVEHGAYP
+SCLGYRGFPRSICTSMNEVICHGIPDSTVLEDGDIVNLDITAYLDGVHGDHNRTYLVGDV
+DEESRLLVERTEEALRRGIRAVKPGRQVNVIGRAIESYAKRFGYGVVRDFIGHGVGVDFH
+SGLVIPHYDAAPAHDRLLEPGMVFTIEPMLTLGTIDWDQWDDGWTVVTRDRRRTAQFEHT
+LVVTDDGAEILTLP
+>1_1292
+MSQRQNPVAPSSHNGPRPAGPTAPEPGSFAPVGTLTPGAPSPAPPVPAAIPRPEYVGKAT
+PDEGKASDVYDAAGVERIRAAGRLAAQAMEHTAAHIRPGVTTDELDRIAHAFLVERGAYP
+SCLGYRGFPRSICTSINEVICHGIPDGTVLEDGDIVNLDITAYLDGVHGDHNRTYLVGDV
+DEESRLLVERTEEALRRGIRAVKPGRQVNVIGRAIESYAKRFGYGVVRDFIGHGVGVDFH
+SGLVIPHYDAAPAHDRLLVPGMVFTIEPMLTLGTIEWDQWDDGWTVVTRDRRRTAQFEHT
+IVVTDDGAEILTLP
+>2_1418
+MSTTARPTSQPSHNGPRPEGPPAPEPGSRAPLGTLTPGAPSPAPAVPASIVRPEYVGRAT
+ADEGNASDVYDTEGIGRIREAGRIAAQAMEHTAEHIRPGITTDELDRIAHEFIVAAGAYP
+SCLGYRGFPRSICTSVNEVICHGIPDGTVLEDGDIVNLDITAYKDGVHGDHNRTYLVGDV
+DEESRLLVERTEEALRRGIKAVKPGREINVIGRAIESYARRFGYGVVRDFIGHGVGVDFH
+SGLVIPHYDAAPAHNRLMVPGMVFTIEPMITLGGIDWEQWDDGWTVVTKDRRRTAQFEHT
+LVVTEDGAEILTLP
+>3_1021
+MSQRQNPAVPSSHNGPRPAGPTAPEPGSLAPVGTLTPGAPSPAPPVPAAIPRPEYVGKAT
+PDEGNASDVYDAAGIERIRAAGRLAAQAMEHTAAHIRPGVTTDELDRIAHAFLVERGAYP
+SCLGYRGFPRSICTSINEVICHGIPDGTVLEDGDIVNLDITAYLDGVHGDHNRTYLVGDV
+DEESRLLVERTEEALRRGIRAVKPGRQVNVIGRAIESYAKRFGYGVVRDFIGHGVGVDFH
+SGLVIPHYDAAPAHDRLLVPGMVFTIEPMLTLGTIEWDQWDDGWTVVTRDRRRTAQFEHT
+IVVTDDGAEILTLP
+>4_1246
+MSQRQNPAVPSSHNGPRPAGPTAPEPGSLAPVGTLTPGAPSPAPPVPAAIPRPEYVGKAT
+PDEGKASDVYDAAGIERIRAAGRLAAQAMEHTAAHIRPGVTTDELDRIAHAFLVERGAYP
+SCLGYRGFPRSICTSINEVICHGIPDGTVLEDGDIVNLDITAYLDGVHGDHNRTYLVGDV
+DEESRLLVERTEEALRRGIRAVKPGRQVNVIGRAIESYAKRFGYGVVRDFIGHGVGVDFH
+SGLVIPHYDAAPAHDRLLVPGMVFTIEPMLTLGTIEWDQWDDGWTVVTRDRRRTAQFEHT
+IVVTDDGAEILTLP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001041.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001041.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7b6e7bd41a12885b02be8ad875b64fdb2f4d23c7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001041.fa
@@ -0,0 +1,15 @@
+>0_1523
+MSEKSEYWYNVRTQQVEEGAQSDWSQLLGPFGTREEAQGAMSRVQANNEAADAADERDDN
+WDNNPFNDAD
+>1_1291
+MTETSEFWYNVNTHQVEVGAQSDWSQLLGPFGTREEAQAAMDRVRANNETADAWDERDDD
+WDSRPVDDAS
+>2_1419
+MTDTHEPGSGYWFNVRTHQIEEGPQSDWKELLGPYQTRQDAENALARVQARNEAADAEDA
+HDDAWDASPLNDAS
+>3_1020
+MTETSEFWYNVNTHQVEVGAQSDWSQLLGPFGTREEAQAAMDRVRANNEAADAEDARDDD
+WDSRPVDDAS
+>4_1245
+MTETSEFWYNVNTHQVEVGAQSDWSQLLGPFGTREEAQAAMDRVRANNEAADAEDARDDD
+WDSRPVDDAS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001047.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001047.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5b10489f05f13d5f6fd1a679e935f14b5141b8d0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001047.fa
@@ -0,0 +1,30 @@
+>0_1530
+MTKNSQPPASSSGSTSADLKQVKAMQRDRRRRVKEETRAQRRDKRANRGPGIISQLKQAY
+AMTKANDPKVGLWMLLAFVGVLVLGLVIGLLLNNWITWLLIAIPFGVLAAVVILNRKARR
+AGFAQLEGRPGAAGAALSTLGRGWIVPEQPVAVNPKTQDVVYRAVGRPGVVLVTEGPSNR
+IAALVGKEEKAMRRFLPGVPVTVVEAGNGQGQVPLHELPRTLKSMKKALTAQEVQAVDKR
+VNALNVNRLPIPKGVDPMKARPSRRAMRGR
+>1_1283
+MTKNSQPPASSSGSTSATLKEVKAMQRERRLREKEQAKAQRRDKRATKGPGVISQLKQAY
+AMTKAHDPKVGLWMLLAFLGALVVGLVIGLLLDNWITWLLIAIPFGVLAAVVILNRKARR
+AGFAQLEGRPGAAGAALSTLGRGWIVSEQPAAVNPKTQDLVYRAVGRPGVVLVTEGPSPR
+VAALVVKEEKAMRRFLPGVPVTVVESGNGQGQVPLHELPGTLKGMKKALTAQEVQAVDKR
+LTALNTNRLPIPKGVDPNKVRPSRRAMRGR
+>2_1426
+MAKNPSTSPSSSGSSSLKEVKAMQRDRRAQLKADAKAERAQKRANAGPGIISQLKQVFAI
+TRQQNPRLVLWMVLAFASVLVLGLVVGLLLHNWITWLLLAIPFGVLAAVIVMNRLGERAM
+FDRLEGQTGAAGATLSSLGRGWIVGEQPSAVNPKTHDLVYRAIGKPGVVLVTEGPASRVG
+KLVSKEQKAMERFLPGVPVHVVETGRGEGQIPLREVPKTLKALPKKLTAQEVSAVDKRLS
+ALGTQKPPIPKGVDPMRARPDRRGMRGR
+>3_1013
+MTKNSQPPASSSGSTSATLKEVKAMQRERRLREKEQAKAQRRDKRATKGPGVISQLKQAY
+AMTKAHDPKVGLWMLLAFLGALVVGLVIGLLLDNWITWLLIAIPFGVLAAVVILNRKARR
+AGFAQLEGRPGAAGAALSTLGRGWIVSEQPAAVNPKTQDLVYRAVGRPGVVLVTEGPSPR
+VAALVVKEEKAMRRFLPGVPVTVVESGNGQGQVPLHELPGTLKGMKKALTAQEVQAVDKR
+LTALNTNRLPIPKGVDPNKVRPGRRAMRGR
+>4_1238
+MTKNSQPPASSSGSTSATLKEVKAMQRERRLREKEQAKAQRRDKRATKGPGVISQLKQAY
+AMTKAHDPKVGLWMLLAFLGALIVGLVIGLLLDNWITWLLIAIPFGVLAAVVILNRKARR
+AGFAQLEGRPGAAGAALSTLGRGWIVSEQPAAVNPKTQDLVYRAVGRPGVVLVTEGPSPR
+VAALVVKEEKAMRRFLPGVPVTVVESGNGQGQVPLHELPGTLKGMKKALTAQEVQAVDKR
+LTALNTNRLPIPKGVDPNKVRPSRRAMRGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001048.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001048.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b3037e4dc590e5fe99d3e71343ea208bc7e45796
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001048.fa
@@ -0,0 +1,35 @@
+>0_1531
+MSLAPEGRRLLRVEARNAEVPVERKPEWIKAKVHMGPEYIGLKNKVKSAGLHTVCEEAGC
+PNIFECWEDREATFLIGGDICTRRCDFCDITSGKPRPLDMDEPQKVAENIREMDLRYATV
+TGVARDDQKDGAAWLYAETIRRIHAFNPGTGVEILPPDFGAVPELVQQVFDARPEVFAHN
+LETVPRIFKRIRPAFTYEKSLKVLSMAKADGLVTKSNLILGMGEEDHEIDQALVDLHEAG
+CDIITVTQYVRPSKLHHPIDRWVKPQEFVEWSRRAEEIGFQGVMAGPLVRSSYRAGKLYA
+QAMQRLGRTLPENLEHLAGEKTARQEASAVVAQMS
+>1_1282
+MSLAPEGRRLLRVEARNAEVPVERKPEWIKAKVHMGPEYIGLKNKVKSAGLHTVCEEAGC
+PNIFECWEDREATFLIGGDICTRRCDFCDITSGKPRPLDMEEPQKVAENIREMDLRYATV
+TGVARDDQKDGAAWLYAETIRRIHALNPGTGVEILPPDFGAVPELVQQVFDARPEVFAHN
+LETVPRIFKRIRPAFTYEKSLRVLTMAKADGLVTKSNLILGMGEEDHEIDQALVDLHEAG
+CDIITITQYVRPSKLHHPIDRWVKPQEFVQWSQRAEEIGFQGVMAGPLVRSSYRAGKLYA
+QAMQRLGRTLPENLAHLAGEKTARQEASAVVAQMS
+>2_1427
+MTTAPEGRRLLRVEARNAEVPVERKPEWIKAKVHMGPEYIGLKNTVKGSGLHTVCEEAGC
+PNIFECWEDREATFLIGGDICTRRCDFCDIASGRPLPLDMDEPQKVAENIREMDLRYATV
+TGVARDDQKDGAAWLYAETIRRIHELNPSTGVEILPPDFGAVPELVQQVFDARPEVFAHN
+LETVPRIFKRIRPAFTYEKSLRVLTMAKEQELVTKSNLILGMGETDEEIDQALVDLHEAG
+CDIITITQYVRPSKLHHPIDRWVKPQEFVAWSQRAEEIGFAGVMAGPLVRSSYRAGKLYA
+QAMERLGREVPEHLAHLRGERTARQEAAAVVARMS
+>3_1012
+MSLAPEGRRLLRVEARNAEVPVERKPEWIKAKVHMGPEYIGLKNKVKSAGLHTVCEEAGC
+PNIFECWEDREATFLIGGDICTRRCDFCDITSGKPRPLDMEEPQKVAENIREMDLRYATV
+TGVARDDQKDGAAWLYAETIRRIHALNPGTGVEILPPDFGAVPELVQQVFDARPEVFAHN
+LETVPRIFKRIRPAFTYEKSLRVLTMAKADGLVTKSNLILGMGEEDHEIDQALVDLHEAG
+CDIITITQYVRPSKLHHPIDRWVKPQEFVHWSQRAEEIGFQGVMAGPLVRSSYRAGKLYA
+QAMQRLGRTLPENLAHLAGEKTARQEASAVVAQMS
+>4_1237
+MSLAPEGRRLLRVEARNAEVPVERKPEWIKAKVHMGPEYIGLKNKVKSAGLHTVCEEAGC
+PNIFECWEDREATFLIGGDICTRRCDFCDITSGKPRPLDMEEPQKVAENIREMDLRYATV
+TGVARDDQKDGAAWLYAETIRRIHALNPGTGVEILPPDFGAVPELVQQVFDARPEVFAHN
+LETVPRIFKRIRPAFTYEKSLRVLTMAKADGLVTKSNLILGMGEEDHEIDQALVDLHEAG
+CDIITITQYVRPSKLHHPIDRWVKPQEFVQWSQRAEEIGFQGVMAGPLVRSSYRAGKLYA
+QAMQRLGRTLPENLAHLAGEKTARQEASAVVAQMS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001052.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001052.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2ae7e411eca32794eae52a5f0b4c2b4f5dd37c95
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001052.fa
@@ -0,0 +1,60 @@
+>0_1535
+MSETVNLPALGESVTEGTVTRWLKAVGDEVAVDEPLVEVSTDKVDTEIPSPVAGVLQEIL
+ADEDETVEVGAPLATIGDGDGGGSSESDDDAQAEESEEPAAEEAQEDEEQQEPEGEPAPE
+ERSSTQDSEEKSSGGASGGDASEVTLPALGESVTEGTVTRWLKAVGDEVEVDEPLLEVST
+DKVDTEIPSPVAGTLLEIRAEEDETVEVGAVLALVGSGSAGGSSDSSDDSAKDDSAPDEA
+SAEEIEDKATEAETGEETEEAAQDAGEEKEEKAPEASASENASREESAEQEKAAAADAPE
+ATSPGQGYVTPLVRRLAHQNDVDLSTVRGTGVGGRIRKQDVLAAALAQQAGSAESAPAQE
+QGSKEQAAAASSAPAVASSVDPSVRGEVEKAPRIRQVIAQRMRESLDLSTQLTQVHEVDV
+TRIVQLRKKAKASFQQQAGVNLTYLPFITKAVAEALKQHPKLNASFSEDNKEITYHASED
+IAIAVDTEKGLLVPVIKDAGSLNLTGLAQKIADVAERTRTNKISPDELSGGTFSITNIGS
+VGALFDTPIINQPQVAILGTGAIVKRPMVVTDADGNDSIAIRHMMYLSLTYDHRLVDGAD
+AGRFLTTLRQRLEGGEFANELGL
+>1_1278
+MSETVNLPALGESVTEGTVTRWLKAVGDEVAVDEPLVEVSTDKVDTEIPSPVAGVLEEIL
+VEEDDTVEVGAPLATIGDGSGGGSADASEDDAAAEEPAVEEAQQDDAQQEPAGEPAPEER
+ASTDQGSDGAPSAGGEASEVTLPALGESVTEGTVTRWLKSVGDEVEVDEPLLEVSTDKVD
+TEIPSPVAGTLLEIRAEEDDTVEVGAVLALVGSGSAGGGSAPSEGSSGQDEASAEEIEDK
+ATEAEAPEETEEAAEAAGAEKSEKTPEASPSEEASRRESAERDSAQAESAEAPSATEPGQ
+GYVTPLVRRLAHQNNVDLSTVRGTGVGGRIRKQDVLAAALASQAAAGGSEAPAEQASEAA
+APSSAPAAASAPAASSSVDPSVRGEVEKAPRIRQVIAQRMRESLDLSAQLTQVHEVDVTR
+IVQLRKKAKASFQQQAGVNLTYLPFITKAVAEALKQHPKLNASFSEDNKEITYHASEDIA
+IAVDTEKGLLVPVIKDAGSLNLTGLAQKIADVAERTRTNKISPDELSGGTFSITNIGSVG
+ALFDTPIINQPQVAILGIGAIVKRPMVVTDADGNDSIAIRHMMYLSLTYDHRLVDGADAG
+RFLRTLRQRLEGGEFANELGL
+>2_1431
+MSETVNLPALGESVTEGTVTRWLKAVGDEVAVDEPLVEVSTDKVDTEIPSPVAGVLEEIL
+VEEDDTVEVGAPLATIGDGSGGGSADASEDDAAAEEPAVEEAQQDDAQQEPAGEPAPEER
+ASTDQGSDEAPSAGGEDSEVTLPALGESVTEGTVTRWLKSVGDEVEVDEPLLEVSTDKVD
+TEIPSPVAGTLVEILANEDDTVEVGAVLARVGSGAAPAASQDPAPAADTASPEEIEDKAT
+EAPTGEQTEEAAEQAGDVKQEQAPAASPAETASAAPAASAPAAETSASEPGPGYVTPLVR
+RLAKQNGVDLSTVRGTGVGGRIRKQDVLAASLANQASSGSASPAAAEEQQTPAAASAPAP
+AAVRGETEKAPRIRQVIAQRMRESLDLSTQLTQVHEVDMTRIVQLRGKAKASFQEKNGVK
+LTYLPFITQAVTEALKQHPKLNASFSEDNKEITYHASEDIAIAVDTDRGLLVPVVKDAGT
+LNLAGLAQKIADVAERTRTNKINPDELSGGTFSITNIGSVGALFDTPIINQPQVAILGTG
+AIVKRPMVVADADGNDTIAIRHMMYLSLTYDHRLVDGADAGRFLQTLKARLEGGEFAAEL
+GL
+>3_1008
+MSETVNLPALGESVTEGTVTRWLKAVGDEVAVDEPLVEVSTDKVDTEIPSPVAGVLEEIL
+VEEDDTVEVGAPLATIGDGSGGGSADASEDDAAAEEPAVEEAQQDDAQQEPAGEPAPEER
+ASTDQGSDGAPSAGGEASEVTLPALGESVTEGTVTRWLKSVGDEVEVDEPLLEVSTDKVD
+TEIPSPVAGTLLEIRAEEDDTVEVGAVLALVGSGSAGGGSAPSEGSSGQDEASAEEIEDK
+ATEAEAPEETEEAAEAAGAEKSEKTPEASPSEEASRRESAERDSAQAESAEAPSATEPGQ
+GYVTPLVRRLAHQNNVDLSTVRGTGVGGRIRKQDVLAAALASQAAAGGSEAPAEQASEAA
+APSSAPAAASAPAASSSVDPSVRGEVEKAPRIRQVIAQRMRESLDLSAQLTQVHEVDVTR
+IVQLRKKAKASFQQQAGVNLTYLPFITKAVAEALKQHPKLNASFSEDNKEITYHASEDIA
+IAVDTEKGLLVPVIKDAGSLNLTGLAQKIADVAERTRTNKISPDELSGGTFSITNIGSVG
+ALFDTPIINQPQVAILGIGAIVKRPMVVTDADGNDSIAIRHMMYLSLTYDHRLVDGADAG
+RFLTTLRQRLEGGEFANELGL
+>4_1233
+MSETVNLPALGESVTEGTVTRWLKAVGDEVAVDEPLVEVSTDKVDTEIPSPVAGVLEEIL
+VEEDDTVEVGAPLATIGDGSGGGSADASEDDAAAEEPAVEEAQQDDAQQEPAGEPAPEER
+ASTDQGSDEAPSAGGEASEVTLPALGESVTEGTVTRWLKSVGDEVEVDEPLLEVSTDKVD
+TEIPSPVAGTLLEIRAEEDDTVEVGAILALVGSGSAGGGSAPSEGSSGQDEASADEIEDK
+ATEAEAPEETEEAAEAAGAEKSEETPEASPSEEASRRESAERDSAQGESAEAPAATEPGQ
+GYVTPLVRRLAHQNNVDLSTVRGTGVGGRIRKQDVLAAALASQAAAGGSEAPAEQASEAA
+APSSAPAAASAPAASSSVDPSVRGEVEKAPRIRQVIAQRMRESLDLSTQLTQVHEVDVTR
+IVQLRKKAKASFQQQAGVNLTYLPFITKAVAEALKQHPKLNASFSEDNKEITYHASEDIA
+IAVDTEKGLLVPVIKDAGSLNLTGLAQKIADVAERTRTNKISPDELSGGTFSITNIGSVG
+ALFDTPIINQPQVAILGTGAIVKRPMVVTDADGNDSIAIRHMMYLSLTYDHRLVDGADAG
+RFLTTLRQRLEGGQFADELGL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001058.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001058.fa
new file mode 100644
index 0000000000000000000000000000000000000000..541203907bfacfaa7b80bf7c939513055cc366ea
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001058.fa
@@ -0,0 +1,15 @@
+>0_1541
+MSITAVAEPAALTRSDRCDRCGAQAYVRAVLPSGGALQFCGHHARAVEDALRPQAAHWQD
+ETDRLTAGA
+>1_1272
+MSITAVAEPAALTRSDRCDRCGAQAYVRAVLHSGGALQFCAHHARAVEDALRPQAALWQD
+ETDRLTAGA
+>2_1437
+MSITAVAEPAALTRADRCDRCGAQAYVRAVLPSGGELLFCGHHARGVEASLRPQAALWQD
+QTEELDGSTAA
+>3_1002
+MSITAVAEPAALTRSDRCDRCGAQAYVRAVLHSGGALQFCAHHARAVEDALRPQAALWQD
+ETDRLTAGA
+>4_1227
+MSITAVAEPAALTRSDRCDRCGAQAYVRAVLHSGGALQFCAHHARAVEDALRPQTALWQD
+ETDRLTAGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001060.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001060.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0ad696d7103b375e73fd66b58e187d0d5511fc1f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001060.fa
@@ -0,0 +1,35 @@
+>0_1544
+MSGFGYDVGLDEAGMPELVERLESRRVLVTGASGLLGAGVARVLADAGNDVVTLQRRPSG
+VAGARDVQGSVTDPAAVERAVAGVDTVVHVAAKVSVSGPEHEFEAVNVEGTRILLHAAQR
+HGARRFVHISSPSVAHAGDSIVGEGAGPASPEHARGPYARTKAAGERLALAADRDDFRVL
+VLRPHLMWGPGDMQLTDRIVQRARAGRMPVLGTGAPLIDTLYTGNAVEAVVAAVSAADHH
+HGEALVVTNGEPRPVGELVRQIALAGGAEEPERHVPAGLARRAGALIERAWERDLFGLRS
+RGVGSDDGEPPLTEFLAEQLSTAHWFDQRRTREVLDWTPSVSIGEGLHRLAAYYRAR
+>1_1270
+MSGFGYDVGLDEAGMPELVERLESRRVLVTGASGLLGAGVARVLADAGNDVVTLQRRPSG
+VAGARDVQGSVTDPAAVEEALTGADTVVHVAAKVSVSGPEHEYEAVNVEGTRILLHAAQR
+HGVRRFVHVSSPSVAHAGDSIVGEGAGAASPEHARGPYARTKAAGERLALAADRDDFRVL
+VLRPHLMWGPGDLQLTDRIVQRARAGRMPVLGTGAPLVDTLYTANAVEAVVAAVSAADVH
+HGEALVVTNGEPRPVGELIRQIALAGGAAEPERRVPAGLARRAGALIERAWERDLFGLRS
+RGVGSDDGEPPLTEFLAEQLSTAHWFDQRRTREVLSWTPTVSIDEGLHRVAAYYRDR
+>2_1440
+MGFEVHLGDDGLLQLAERVEHRRVLVTGASGLLGSGVARVLAEAGNPVTTLQRRPSGVPG
+AVDVLGSVTDPAAVERALEGVDTVVHVAAKVSVSGPEEEFAAVNVEGTRILVHAARRRGV
+HRFVHVSSPSVAHAGASIVGEGAGPADPEHARGPYARTKAAGELIALGADADDFRVLALR
+PHLMWGPGDLQLTDRIVQRAREGRMPVLGSGAALVDTLYTGNAVEAVVAAVSAVDHTHGE
+ALVVTNGEPRPVGELIRRIALAGGAPEPERTVPAGVARRAGALIERAWERDLFGVRSSGR
+GSADGEPPLTEFLAEQLSTSHWFDQRRTREVLDWTPSVSMDEGLLRLAAYYRDR
+>3_1000
+MSGFGYDVGLDAAGMPDLVERLESRRVLVTGASGLLGAGVARVLADAGNDVTTLQRRPSG
+VPGARDVRGSVTDPAAVEEALTGADTVVHVAAKVSVSGPEHEYEAVNVEGTRILLHAAQR
+HGVRRFVHVSSPSVAHAGDSIVGEGAGAASPEHARGPYARTKAAGERLALAADRDDFRVL
+VLRPHLMWGPGDLQLTDRIVQRARAGRMPVLGTGAPLVDTLYTANAVEAVVAALSAADVH
+HGEALVVTNGEPRPVGELIRQIALAGGAAEPERRVPAGLARRAGALIERAWERDLFGLRS
+RGVGSDDGEPPLTEFLAEQLSTAHWFDQRRTREVLAWTPTVSIDEGLHRVAAYYRDR
+>4_1225
+MSGFGYDVGLDAAGMPDLVERLESRRVLVTGASGLLGAGVARVLADADNDVTTLQRRPSG
+VPGARDVRGSVTDPAAVEEALTGADTVVHVAAKVSVSGPKHEYEAVNVEGTRILLHAAQR
+HGVRRFVHVSSPSVAHAGDSIVGEGAGAASPEHARGPYARTKAAGERLALAADRDDFRVL
+VLRPHLMWGPGDLQLTDRIVQRARAGRMPVLGTGAPLVDTLYTANAVEAVVAAVSAADVH
+HGEALVVTNGEPRPVGELIRQIALAGGATEPERRVPAGLARRAGALIERAWERDLFGLRS
+RGVGSDDGEPPLTEFLAEQLSTAHWFDQRRTREVLAWTPTVSIDEGLHRVAAYYRDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001062.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001062.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a2711377e459506fc1801650a4c682e97340c702
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001062.fa
@@ -0,0 +1,35 @@
+>0_1546
+MTNVSGNASYEYSRAALLAVTEVEAPLEVTSDDLDERLADVLRRLKLPPHLLQRVAGVRA
+RRNWDASQDFQEAAAQAGTAALAAAGIGPERVGLLINTSVTRATLEPSVAVRIHHMMGLP
+TSATNFDITNACLGFVNGLMMASTLVDAGQVDYAVVVASEDASKVQDATVENLHASTTNR
+GNFMEQFASLTLGCGAAAAVVGSIEDHPDAHRIVRGITRAGTDHHDLCVGDHRGMYTDST
+ALLNDGLELVMDAWNDTPAEWAWKDADRFITHQVSQLHTNAISESAGLPLDRIPTTFPVL
+GNVGPASLPITLVREMDELSAGDTVVCLGVGSGLNTAMLEIQW
+>1_1268
+MTNVSGNASYEYSRAALLAVTEVEAPLEVTSDDLDERLADVLRRLKLPPHLLQRVAGVRA
+RRNWDASQDFQEAAAQAGTAALAAAGIGPERVGLLINTSVTRATLEPSVAVRIHHMMGLP
+TSATNFDITNACLGFVNGLMLASTLVDAGQVDYAVVVASEDASKVQDATVENLHASTTNR
+GNFMEQFASLTLGCGAAAAVVGSIEDHPDAHRIVRGITRAGTDHHDLCVGDHRGMYTDST
+ALLNDGLELVMDAWNDTPAEWAWKDADRFITHQVSQLHTNAISESAGLPLDRIPTTFPVL
+GNVGPASLPITLVREMDELSAGDTVVCLGVGSGLNTAMLEIQW
+>2_1442
+MVQVPHVSGNASFEFSRAALLSVTEVQAPLEVTSDDLDEQLADVLTRLRLPRHLLERVAG
+VKVRRAWDAQKDFQQAAAEAGTAALAAAGVAPGQVGLLVNTSVTRATLEPSVAVRIHDLM
+GLPTSATNFDITNACLGFVNGLMLASTMVDAGQIDYAVVVAAEDASKVQASTVANLHAET
+TVRGNFMEQFASLTLGSGAAAAVVGRTDEHPDAHRILRGITRAGTDHHQLCVGDHNGMFT
+DSNALLKDGLELVMDAWHDVPAEWGWDHAARYVTHQVSQMHTDAISESAGIPLEKLPTTF
+PVLGNVGPASLPITLVREQDSLRRGDAVVCLGVGSGLNTAMLEIQW
+>3_998
+MTNVSGNASYEYSRAALLAVTEVEAPVEVTSQDLDDQLAEVLTRLRLPGSLLERVAGVRS
+RRNWDETEDFQEAAARAGVAALEQAGVPRERVGLLVNTSVTRATLEPSVAVRIHHLMGLP
+TSATNFDITNACLGFVNGLMLASTLVDAGQIDYAVVVAAEDASKVQAATVANLHAETTHR
+GNFMEQFASLTLGSGAAAAVVGRIEDHPDAHRIVRGITRAGTDHHGLCVGDHHGMYTDST
+ALLKDGLELVMDAWHDVPAEWAWPQADRFITHQVSQMHTDAIAESAHLDPARIPTTFPTL
+GNVGPASLPITLVREMDALEDGDTVVCLGVGSGLNTAMLEIEW
+>4_1223
+MTNVSGNASYEYSRAALLAVTEVEAPVEVTSQDLDDQLAEVLTRLRLPGSLLERVAGVRS
+RRNWDETEDFQEAAARAGVAALEQAGVPRERVGLLVNTSVTRATLEPSVAVRIHHLMGLP
+TSATNFDITNACLGFVNGLMLASTLVDAGQIDYAVVVAAEDASKVQAATVANLHAETTHR
+GNFMEQFASLTLGSGAAAAVVGRIEDHPDAHRIVRGITRAGTDHHGLCVGDHHGMYTDST
+ALLKDGLELVMDAWHDVPAEWAWPEADRFITHQVSQMHTDAIAESAHLDPARIPTTFPTL
+GNVGPASLPITLVREMDALEDGDTVVCLGVGSGLNTAMLEIEW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001064.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001064.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f81c188f1b734fbd57a3c8814097402f55d4a96b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001064.fa
@@ -0,0 +1,35 @@
+>0_1550
+MAEALPVFWYVIIAVLWLGYLALEGFDLGAGMLMQAWARDERRRRVLLNVIGPVWEGNEV
+WLITAIGAMFAAFPFWYASLLSTLYLPMLLLLLALILRAVSIEYRGKARTDRTRAVWTWC
+LALGSFTAAFVVGAFLALTTTGLPIDANGDRVGGPFAWLNGWAVLGGLAVVGFSIAQAWA
+FIGLKTDGAPRQAAARFLSRWTPVALAPLLVWAGAVLLRGDRPWTWALLAAGVAAAAGSV
+VAARRGREGLALAGLTLFLVAAWSAVMIVQFPVLQPSTVDPAFDLTAEIAASGPYTLGIM
+AVVSLVFVPIVLAYSAWSYWVFRRRVRETHIPEPHAVEPV
+>1_1264
+MAEALPVFWYVIIAVLWLGYLALEGFDLGAGMLMQAWARDERRRRVLLNVIGPVWEGNEV
+WLITAIGAMFAAFPFWYASLLSTLYLPMLLLLLALILRAVSIEYRGKARTDRTRAVWTWC
+LALGSFTAAFVVGAFLALTTTGLPIDANGDRVGGPFAWLNGWAVLGGLAVVGFSIAQAWA
+FIGLKTDGAPRQAAARFLSRWTPVALAPLLVWAGAVLLRGDRPWTWALLAAGVAAAAGSV
+VAARRGREGLALAGLTLFLVAAWSAVMIVQFPVLQPSTVDPAFDLTAEIAASGPYTLGIM
+AVVSLVFVPIVLAYSAWSYWVFRRRVRETHIPEPHAVEPV
+>2_1446
+MTEALPVYWFVIIAVLWLGYLALEGFDLGVGMLMQAWARDERRRRVLLNIIGPVWEGNEV
+WLITAIGAMFAAFPFWYAALLSTLYIPMLLLLFALILRAVSIEYRGKAQTDRVRGIWTWC
+LAVGSFLAAFIVGAMLALTTTGLPLDAHGDRVGGPSAWLNGWAVLGGLAVVGFSIAQAWA
+FIGLKTDGAPRVAAARFLRTWTPVAVLPMLVWALAVLVRGDRPGAWILLLLALAAVLVSV
+LAARAGREGVALAGLTGFAAATWSAVMVAQFPVLTPSAVDRAYDLTAQVSSSGSYTLGVM
+AVVSLVFVPIVLAYSAWSYWVFRHRVKETHIPESHIVEPV
+>3_996
+MAEVLPVYWYVIIAVLWLGYLALEGFDLGVGMLVRFWARDEPRRRVLLNIIGPVWEGNEV
+WLITAVGAMFAAFPFWYAAVFSTLYLPMLVMLFGLILRAVSIEYRGKAATDAGREIWTWT
+LGIGSFLAAFMAGVLLVLTTTGLPLDANGDRVGGPFVWVTGPALLGGLAVVGFSLAQAWA
+FIGLKTDGAPRRSAARFLSTWTPLAVLPLLVWAGLVVARGDRPWTWALLVLAVVAVAASV
+VAARAGREGLAFTSLTLVLVLAWTAIMVTQYPVVLPSTVDPQFSLTAQLASSGPYTLGLM
+AVISLIFVPIVLAYTGWSYWMFRRRLADTHIPEAHLVEPL
+>4_1221
+MAEVLPVYWYVIIAVLWLGYLALEGFDLGVGMLVRFWARDEPRRRVLLNIIGPVWEGNEV
+WLITAVGAMFAAFPFWYAAVFSTLYLPMLVMLFGLILRAVSIEYRGKAATDAGREIWTWT
+LGIGSFLAAFMAGVLLVLTTTGLPLDANGDRVGGPFVWVTGPALLGGLAVVGFSLAQAWA
+FIGLKTDGVPRRSAARFLSTWTPLAVLPLLVWAGLVVARGDRPWTWALLVLAVVAVAASV
+VAARAGREGLAFTSLTLFLVLAWTALMVTQYPVVLPSTVDPQFSLTAQLASSGPYTLGLM
+AVISLIFVPIVLAYTGWSYWMFRRRLADTHIPEAHLVEPL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001075.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001075.fa
new file mode 100644
index 0000000000000000000000000000000000000000..03ba3242020926daf57c8bfef1382c0a765fb235
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001075.fa
@@ -0,0 +1,25 @@
+>0_1562
+MTEPRGPESPAPDVAGALPSRARVDEQGRLDALASVGGWRGIVEASLPTLVFMAGYVVSQ
+QVWPSGVAAVAVALVLGAVRLVQRQSPVQVLAGLAVVVLSVVVALTTGQARDYYLWGFVT
+NAAYGLAFALSVVVGWPAAGLVLGLVRGEGTHWRRSPRRRRAYATATWILVAVFTLRLAV
+QVPLYLADAVTALGVARLVMGLPLYALGLWLAWSVSAPAPGEDDGLRPAAEDEPAPGRA
+>1_1252
+MTEPRGPVTAAPDGAGPLPSRARLDERGRLDALGSVGGWRGIVEASLPTLVYMVGYVATQ
+QVWPSGVAAVAVALVLGVARLVQRQSPVQVLAGLAVVVLSVVVSLTTGQARDYYLWGFVT
+NAAYGLAFAVSVLVGWPAAGLVLGLVRAEGTRWRAHRRRRRAYAAATWILVAVFALRLAV
+QVPLYLGDAVTALGVARLVMGLPLYALGLWLAWSVSSPGQDDGVPADSAASERP
+>2_1458
+MSAHPRPDHGPDAAPSAAEGLQALGARTRVDEDGRIDALATVGGVRGIVEASLPTLVFLV
+VFLLAGQVWTAGAAALGVAAVMTAARLAQRQSAAQALAGLLVVGVSVVLALTRGEARDFY
+LWGFVTNIAYGLALPLSAALGWPLAGLLFGMVRGEGLHWRADPARRRAYGIATLIVAAVS
+WLRLAVQAPLYLADAATALGVARVVMGLPLYALGLWLAWSVSTPRPGAPPLRRDPAAG
+>3_984
+MTEPRGPVTAAPDGAGPLPSRARLDERGRLDALGSVGGWRGIVEASLPTLVYMVGYVATQ
+QVWPSGVAAVAVALVLGVARLVQRQSPVQVLAGLAVVVLSVVVSLTTGQARDYYLWGFVT
+NAAYGLAFAVSVLVGWPAAGLVLGLVRAEGTRWRAHRRRRRAYAAATWILVAVFALRLAV
+QVPLYLGDAVTALGVARLVMGLPLYALGLWLAWSVSSPGQDDGVPADSAASERP
+>4_1209
+MTEPRGPVTAAPDGAGPLPSRARLDERGRLDALGSVGGWRGIVEASLPTLVYMVGYVATQ
+QVWPSGVAAVAVALVLGVARLVQRQSPVQVLAGLAVVVLSVVVSLTTGQARDYYLWGFVT
+NAAYGLAFAVSVLVGWPAAGLVLGLVRAEGTRWRAHRRRRRAYAAATWILVAVFALRLAV
+QVPLYLGDAVTALGVARLVMGLPLYALGLWLAWSVSSPGQDDGVPADSAASERP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001077.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001077.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6e98071b3b2e85aa23de337298ae847243ecb493
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001077.fa
@@ -0,0 +1,25 @@
+>0_1564
+MAHYVIVGGGRVGTRLACALDAAGHSVALVDRDPRTVDGLVPGFSGELVAGVGFDRAALL
+AAGVDRAQGLAAVTAEDNTNIIAARVARETFHVEHVVARIYDADQAKVYQRLGIPTVASI
+QWTADQVLHRLLPAGTADVERRDASGRLLVTGLVPHPSWWGRRLTDVESGAGLRIAYLTR
+RGEGLLPRPGDRLQEGDLLHAVYPVDRRDQVEAALQGEAVRSDRDAEDEDEEGRA
+>1_1250
+MAHYVIVGGGRVGTRLAAALDAAGHGVALVDRDPRTVEGLAPGFSGELVAGVGFDRSALL
+AAGIDRAQGLAAVTADDNTNIIAARVARETFHVDHVVARIYDADRARLYQRLGIPTVASI
+QWTADQVLHRLLPAGTADAEHRDASGRLLVTELVPHSSWWGRRLTDVESTVGMRIAYLTR
+LGDGQLPRPGDRLQEGDVLHAVYPVDRRDRVEAALQGEARVPDGTDEDEEGRA
+>2_1460
+MAHYVIVGAGRVGTRLAGALDTAGHSVAVIERSPELTAGLGPDFGGTVVAGIGFDRDALR
+RAGIEQAQGLAAVTTEDTTNVIAARVARETFGVQHVVARIYDAQRARVFQRLGIPTVASV
+EWTADQVLHRLLPAGTAEPSRRDASGRLAMGDYMPHRSWWGSPLHAVEAAVGARIAYLTR
+YGEGVLPSPDGVLQEGDVLHVAYPAARRDRVEAALQGEAGDVRAGEDEDQEEDA
+>3_982
+MAHYVIVGGGRVGTRLAAALDAAGHGVALVDRDPRTVEGLAPGFSGELVAGVGFDRSALL
+AAGIDRAQGLAAVTADDNTNIIAARVARETFHVDHVVARIYDADRARLYQRLGIPTVASI
+QWTADQVLHRLLPAGTADAEHRDASGRLLVTELVPHSSWWGRRLTDVESTVGMRIAYLTR
+LGDGQLPRPGDRLQEGDVLHAVYPVDRRDQVEAALQGEARVPDGTDEDEEGRA
+>4_1207
+MAHYVIVGGGRVGTRLAAALDAAGHGVALVDRDPRTVEGLAPGFSGELVAGVGFDRSALL
+AAGIDRAQGLAAVTADDNTNIIAARVARETFHVDHVVARIYDADRARLYQRLGIPTVASI
+QWTADQVLHRLLPAGTADAEHRDASGRLLVTELVPHSSWWGRRLTDVESTVGMRIAYLTR
+LGDGQLPRPGDRLQEGDVLHAVYPVDRRDQVEAALQGEARVPDGTDEDEEGRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001078.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001078.fa
new file mode 100644
index 0000000000000000000000000000000000000000..86599b111b1125314b15be28533fc80e00c2467b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001078.fa
@@ -0,0 +1,61 @@
+>0_1565
+MATLSSLLRRGLLGRPVASHDVAEPRMSRWQALPVTSSNALSSLAYAPDEIVLTLVAAGT
+AALALGPLVGWGVVVVMLLIVASFRAAVAAVPQGGIYQMARTKLGPRAGVVASAALLLDF
+VFTAAVSVAAFAHFAAALLPGLGLESRVLVACAALVGVLLTSLRSARLSRWALPVLVSAF
+VALTALLVAAGLWQEGQGLLGRAATSGWTQEGAGIGGTVGAVATALLALRAFSAGSVLLT
+GVEVPVSSSSAMARPAVATVRWVLAVMALTLGALTLGVMHLAQRTGVVVALDPARLRDAA
+GRPVAEADTPAPVIAQLADTVFGPGSVLSLATIAATALLLLFAARSAFRSFPALASRLAE
+DGYLPRQLRVRGDRLVHTWGVLALGAAALALVLLFRAQTALLVQLYVIGVLLAFTLAQAG
+MLRLWRRRLAQTPGARARAAVRLRLTITAVAWVVTALAGVVVLVTRFAQGAWVALLAIVL
+GSLVMGRIRRHYEDVGRELAPDPEDDARALPSRVHVVVVVSTLNRPALRALAYARATRPS
+SLEAVVVDAERAVTEDVIDAWSRAGLPVPLTVVAAPYRDTVVPLVRHLRERRRRSPRDLT
+MVFIPEYVVRPGWRTLMHNRTATRQKRRLQREAGVMIGSVPWQIHEGQGDGQRSTTV
+>1_1249
+MATLSSLLRRGLLGRPVTSHAADEPRMNRWRALPVTSSNALSSLAYAPDEVILTLVAAGT
+SALALGPAVGWAVVAVMLLIVVSFRAAVAAVPHGGIYHMAGMKLGPRAGVVASAALLLDF
+VFTAAVSVAAFAHFVAALAPGLTVGSRVLVASAALVGVLLAALRGVRLSRWVLPVLVSVF
+VALTALLVLAGLWQEGRGLLGAAPTAGWTQEGAGVGGTVGTVATALLALRAFSAGSVLLT
+GVEVPVSSTRLMARPAVPTVRWVLTVMALTLGALTVGVMHLAQRTGVVVGLELENLRDAA
+GAEVTPDRAPAPVLAQLADTVYGPGSILSVATIAATALLLLFAAKSAFRSFPALAARVAE
+DGYLPRQLRVRSDRLVHTWSVLGMGAVALSLVLFFEARTALLVQLYVIGVLLAFTLAQAG
+MLRLWRRRLVHTPGARARAAVRLRLIITAVAWVVTALAGVVVLVTRFTQGAWVALLAIVL
+GSLVMGRIRRHYADVDRELAPDPQDDARALPSRVHVVVVVTTLDRPALRALAYARASRPS
+SLEAVVVDAERAATLEVIDAWERAGLPMSLTVIASPYRDTVAPLVRHVREHRRRSPRDLT
+MVFIPEYVVRPGWRTLLHNRTATRQTRRLQREPGVMVGSVPWQVHEGQGS
+>2_1461
+MSTPPSTLRRLLLGRPVASGARPAPRRGRWLALPATASNALSSLAYAPDEVILTLVASGT
+GALALGPLVGWAVVAVMVLIVLAFRAAVVAVPRGGIYRMARTKLGPRSGVVAAAALLLDF
+VFTAAVSVAAFAHHASALVPALRGHVGIVSAVALVLVLVSALRGERGSGALVTVLVAAFV
+GLLGTLVAVGLWQSGQGTLAAAPSAGLHVDGAGLGPVGDAATALLALRAFSAGSVLLSGV
+EVPLSATDRMARPAVRTARWVLTVLAVVVGTLTVGVMHLAQRTGVVVALHPDRLRTADGA
+PLAPDTAPAPVVAQLAETVFGAGSPGAVATVAVTSLLLLVAARGAFRSFPTLTARLAEDG
+WLPRQLRVRGDRMVHTGGTLALATATLLLLVLFRGRTALLVQLYVIGVLLAFALALVGML
+RLWRLKLAHTPGARARASVRVKLVVTAVGLGATALAGVVVLVTRFAQGAWVALLAIGVSA
+VVMGRIRRHYRAVEAELAPDPQDDARALPSRVHAVVVVSTLNRPALRALAYARATRPATL
+EAVVVDADRRQTERVVEDFARAGLPVPLTVIAAPYRDTVVPLVRHVRGRRLRSPRDLTMV
+FIPEHVVRGGWRRLLHNRTASRQKARLQREAGVMVGSVPWQIREGDPHRPVEGGIVACAA
+PGDVPEGVESS
+>3_981
+MATLSSLLRRGLLGRPVTSHAADEPRMNRWRALPVTSSNALSSLAYAPDEVILTLVAAGT
+SALALGPAVGWAVVAVMLLIVVSFRAAVAAVPHGGIYHMAGMKLGPRAGVVASAALLLDF
+VFTAAVSVAAFAHFVAALAPGLTVGSRVLVASAALVGVLLAALRGVRLSRWVLPVLVSVF
+VALTALLVLAGLWQEGRGLLGAAPTAGWTQEGAGVGGTVGTVATALLALRAFSAGSVLLT
+GVEVPVSSTRLMARPAVPTVRWVLTVMALTLGALTVGVMHLAQRTGVVVGLELENLRDAA
+GAEVTPDRAPAPVLAQLADTVYGPGSILSVATIAATALLLLFAAKSAFRSFPALAARVAE
+DGYLPRQLRVRSDRLVHTWSVLGMGAVALSLVLFFEARTALLVQLYVIGVLLAFTLAQAG
+MLRLWRRRLVHTPGARARAAVRLRLIITAVAWVVTALAGVVVLVTRFTQGAWVALLAIVL
+GSLVMGRIRRHYADVDRELAPDPQDDARALPSRVHVVVVVTTLDRPALRALAYARASRPS
+SLEAVVVDAERAATLEVIDAWERAGLPMSLTVIASPYRDTVAPLVRHVREHRRRSPRDLT
+MVFIPEYVVRPGWRTLLHNRTATRQTRRLQREPGVMVGSVPWQVHEGQGS
+>4_1206
+MATLSSLLRRGLLGRPVTSHAADEPRMNRWRALPVTSSNALSSLAYAPDEVILTLVAAGT
+SALALGPAVGWAVVAVMLLIVVSFRAAVAAVPHGGIYHMAGMKLGPRAGVVASAALLLDF
+VFTAAVSVAAFAHFVAALAPGLTVGSRVLVASAALVGVLLAALRGVRLSRWVLPVLVSVF
+VALTALLVLAGLWQEGRGLLGAAPTAGWTQEGAGVGGTVGTVATALLALRAFSAGSVLLT
+GVEVPVSSTRLMARPAVPTVRWVLTVMALTLGALTVGVMHLAQRTGVVVGLELENLRDAA
+GAEVTPDRAPAPVLAQLADTVYGPGSILSVATIAATALLLLFAAKSAFRSFPALAARVAE
+DGYLPRQLRVRSDRLVHTWSVLGMGAVALSLVLFFEARTALLVQLYVIGVLLAFTLAQAG
+MLRLWRRRLVHTPGARARAAVRLRLIITAVAWVVTALAGVVVLVTRFTQGAWVALLAIVL
+GSLVMGRIRRHYADVDRELAPDPQDDARALPSRVHVVVVVTTLDRPALRALAYARASRPS
+SLEAVVVDAERAATLEVIDAWERAGLPMSLTVIASPYRDTVAPLVRHVREHRRRSPRDLT
+MVFIPEYVVRPGWRTLLHNRTATRQTRRLQREPGVMVGSVPWQVHEGQGS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001079.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001079.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d8ef428cc33f2b752f1df08f664f08a97c37f16c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001079.fa
@@ -0,0 +1,50 @@
+>0_1566
+MAVIDTSTGVTGIGGTIEVEVGAMAHGGHCVARHEGRVVFVRHAVPGEKVRVALTEAEEG
+ARFWRGDVVEVLRPSEFRRIHQWKLADMLRAHASGRPPVGGAEFGHIVVPHQRRLKAQVF
+RDTVHRIAGLTVEPEVCFAGPEDEPTGQRWRTRNAFTVTPQGHIAMHAYRSATLLPVRNM
+PLGVPALDALALWDWDFTGAARVDVATPASGSRPLVLVTPTPQTRADEAKLGRLRTRIRQ
+AANACGVDVSTGLALPGPKRHSPVKVERITGKTWVEETVESERGGTKRFRVTGDGFWQVH
+RHAPATLVDAVLEDARIEPGQTVADLYGGAGLFSAYLADAVGPEGRVFSVEAAGQASKDA
+RRNLHGQPQATVLNGPTDKALGSWIKYPERTVADGGLEGASLDTVVLDPPRAGAGRRAIE
+RLLALEPGRIVYVSCDPASFARDLAWLRDGGYEVERARVFDLYPDTHHLESVTVLVPATQ
+LAAVPAIVEI
+>1_1248
+MAVVDTSTDVTGIGRTIEVEVGAMAHGGHCVARHEGRVVFVRHAVPGEKVRVALTEAEDG
+ARFWRGDVVEVLRPSEFRRIHQWKLADMLRAHASGRPPVGGAEFGHIVVPHQRRLKAQVF
+RDTVHRIADLAVEPEVCFAGSEDEPTGQRWRTRNAFAVTPQGHIAMHAYRSATLLPVRNM
+PLGVPALDALALWDWDFTGAARVDVATPASGSRPLVLVTPTPQTRADEVKLGRLRTRIRQ
+AANACGVDVSTGLALPGPKQFQPVKVERITGKTWVEETVESERGGTKRFRVTGDGFWQVH
+QHAPATLVDAVLEDARVEPGQVVADLYGGAGLFSAYLADAVGPEGRVYSVEASRQASKDA
+RRNLHDQPQASVLNGPTDKVLGSWLKYPERPVADGGLGGAALDTVVLDPPRAGAGRRAIE
+RILALEPGRIVYVSCDPASFARDLAWLRDGGYEVERARVFDLYPDTHHLESVTVLVPAAQ
+SAPAAAVVEI
+>2_1462
+MDTSTEVVAPGGVIEVEAGAMAHGGHCVARHEGRVVFVRHAIPGEIVRVALTEAEPGARF
+WRGDVVEVVRPSEFRRIHQWKLADSLRAHASGRLPVGGAEYGHIVVHHQRRLKAQVFRDT
+VARIAGVTIEPEALHAGHEDEPTGQHWRTRTAFAVTPQGRIAMHAHRSAVLLPVRNMPLG
+VHALDALALWDWDFTGAARVDVATPADGTQPLVLATPTPQTLADEARLGKLRTRIRQAAN
+ACPVDVSTGFAVPGPKKFSPTGIQRITGRTWVHETVSSERGGERTFRVTGDGFWQVHQHA
+PATLVDAVLEDVDPQPGEVIADLYAGAGLFSAFLSDAVGEEGRVYSVEASRQASKDARRN
+LLSLPQAGVLNGPTDKVLGSWIKEPERTTRDGGLDGDRLDAVVLDPPRAGAGRRAIERIL
+ALAPGRICYVSCDPASFARDLAWLREGGYEVERARVFDLYPDTHHLESVTLLRPAGEVEQ
+TTL
+>3_980
+MAVVDTSTDVTGIGRTIEVEVGAMAHGGHCVARHEGRVVFVRHAVPGEKVRVALTEAEDG
+ARFWRGDVVEVLRPSEFRRIHQWKLADMLRAHASGRPPVGGAEFGHIVVPHQRRLKAQVF
+RDTVHRIADLAVEPEVCFAGSEDEPTGQRWRTRNAFAVTPQGHIAMHAYRSATLLPVRNM
+PLGVPALDALALWDWDFTGAARVDVATPASGSRPLVLVTPTPQTRADEVKLGRLRTRIRQ
+AANACGVDVSTGLALPGPKQFQPVKVERITGKTWVEETVESERGGTKRFRVTGDGFWQVH
+QHAPATLVDAVLEDARVEPGQVVADLYGGAGLFSAYLADAVGPEGRVYSVEASRQASKDA
+RRNLHDQPQASVLNGPTDKVLGSWLKYPERPVADGGLGGAALDTVVLDPPRAGAGRRAIE
+RILALEPGRIVYVSCDPASFARDLAWLRDGGYEVERARVFDLYPDTHHLESVTVLVPAAQ
+SAPAAAVVEI
+>4_1205
+MAVVDTSTDVTGIGRTIEVEVGAMAHGGHCVARHEGRVVFVRHAVPGEKVRVALTEAEDG
+ARFWRGDVVEVLRPSEFRRIHQWKLADMLRAHASGRPPVGGAEFGHIVVPHQRRLKAQVF
+RDTVHRIADLAVEPEVCFAGSEDEPTGQRWRTRNAFAVTPQGHIAMHAYRSATLLPVRNM
+PLGVPALDALALWDWDFTGAARVDVATPASGSRPLVLVTPTPQTRADEVKLGRLRTRIRQ
+AANACGVDVSTGLALPGPKQFQPVKVERITGKTWVEETVESERGGTKRFRVTGDGFWQVH
+QHAPATLVDAVLEDARVEPGQVVADLYGGAGLFSAYLADAVGPEGRVYSVEASRQASKDA
+RRNLHDQPQASVLNGPTDKVLGSWLKYPERPVADGGLGGAALDTVVLDPPRAGAGRRAIE
+RILALEPGRIVYVSCDPASFARDLAWLRDGGYEVERARVFDLYPDTHHLESVTVLVPAAQ
+SAPAAAVVEI
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001081.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001081.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fef4d2959a15091f16cb5c5450a6d82bf85dd2e5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001081.fa
@@ -0,0 +1,65 @@
+>0_1568
+MEHLPPTSPGAPLLPQIASPADLADVSEEQLTALAAEIRDYLIAHVSKTGGHLGPNLGVV
+ELTLAVHRVFESPKDAVLFDTGHQSYVHKLLTGRQDFTTLRQEGGLSGYGDRAESEHDVV
+ESSHASSSLSWADGIARAWHQTGQGDRTVVAVIGDGALTGGMAWEAVNNIAAGRDRRVVI
+VVNDNGRSYAPTVGGIADHLDGLRRGVLDKVRTHHRYEQTLDFLKRRLQEAGTAGEMVYR
+PLHAAKKGLKDLWAPQGLFEDLGMKYIGPVDGHDLGELEEALEDAKAYGGPVIVHALTEK
+GHGYAPARAHEDDQFHAIGVIDPSTGEPVTSSTAQSWTSVFGEEMLAIAEERPDVVAITA
+AMRNPVGLAPMALAHPDRVFDVGIAEQHAVASAAGMAFGGLHPVVAVYATFLNRAYDQVL
+MDVGLHRAGVTFVLDRAGVTGPDGPSHHGMWDLALLQSVPGLRIAAPRDAETLREELREA
+VAVEDAPTVVRFAKGSVGEPVRAIERLADGTDVLARRGEAGARDGAERDVLIVAVGALAE
+LGLDVAERLERHGISSTVVDPRWVLPVAESVIEAAARHRIVVCLEDGVRAGGVGSRIRQE
+MRAAGVDTALNEVGLPVEFLAHGSREQVLARVGLTAQRVTQDTVAQVLGAKVPYARPVPQ
+DEAARHPQEHA
+>1_1239
+MEHLPPTSPGAPLLPQIARPADLSALTEDQLTALAAEIRAYLIAHVSKTGGHLGPNLGVV
+ELTLAVHRVFESPKDAVIFDTGHQSYVHKLLTGRQDFTTLRQEGGLSGYGDRTESEHDVV
+ESSHASSSLSWADGIARAWAQTGQGDRTVVAVIGDGALTGGMAWEAVNNIAAGRDRRVVI
+VVNDNGRSYAPTVGGVAEHLGGLRRGVLDKVRTHHRYEQTLDYLKRRLQEAGLAGELVYR
+PLHAAKKGLKDLWAPQGLFEDLGMKYIGPVDGHDLTAMEEALEDARAYGGPVIVHAMTEK
+GHGYAPAVAHEADQFHAIGVIDPSTGEPITSSTAQSWTSVFGEEMVAIADERPDVVAITA
+AMQNPVGLAPMALAHPDRVFDVGIAEQHAVTSAAGMAFGGLHPVVAVYATFLNRAYDQVL
+MDVGLHRAGVTFVLDRAGVTGPDGPSHHGMWDLALLQSVPGLRISAPRDADTLREELREA
+VAVEDAPTVVRFAKGSVGESVRALERLSDGTDVLARRGEAGGRDGAERDVLIVAVGAMAE
+LGLDVAERLERHGISATVIDPRWVLPVARSVIDTAARHRIVVCLEDGVRAGGVGSRIRQE
+MRAAGVDTALNEVGLPVEFLAHGSREQVLARVGLTAQRITQDTVAQVLGAKVPYARPVPE
+DAAAPHHQEQA
+>2_1464
+MSDTSRAPLGAPLLPGIHSPEDLALLSDAQLRALAAEIRAFLIQHVSQTGGHLGPNLGVV
+ELTLAIHRVFDSPRDAVVFDTGHQSYVHKLLTGRQDFSRLRQQGGLSGYGDRAESEHDVV
+ESSHASSSLSWADGISRAWKQTGQGDRTVVAVIGDGALTGGMAWEAVNNIAADRDRRVVI
+VVNDNGRSYAPTVGGIADHLGGLRRGVLDKVRMHHRYEQTLDYLKRRLQEAGTAGEMVYR
+PLHAAKKGLKDLWAPQGLFEDLGMKYIGPVDGHDEHALEEALEDAKAYGGPVIVHAMTEK
+GHGYGPATSHEDDMFHAIGRIDPETGRPISSPTAQSWTSVFGEEILDIARERPDVVAITA
+AMQNPVGLGPMAAEFPDRVFDVGIAEQHAVTSAAGMAFGGLHPVVAVYATFLNRAFDQVL
+MDVGLHRAGVTFVLDRAGVTGPDGPSHHGMWDLALLQSVPGLRIAAPRDADTLREELREA
+VAVDDAPTVLRFAKGSVGEPVRALERLSDGTDVLARLGAPTGADGAERDVLIVAVGSFAE
+LGLDVARRLGQHGITATVVDPRWVLPVARSVIELAGRHRIVVCLEDGVRAGGVGSRIRQE
+MRAAGVDTALNEVGLPVEFLAHATRDQVLERVGLTAQRITQDTVAQVLGAKVPYARALPR
+DAEHPEASAHPAGAPTTSAQAARPEEQA
+>3_967
+MEHLPPTSPGAPLLPQIARPADLSALTEDQLTALAAEIRAYLIAHVSKTGGHLGPNLGVV
+ELTLAVHRVFESPKDAVIFDTGHQSYVHKLLTGRQDFTTLRQEGGLSGYGDRTESEHDVV
+ESSHASSSLSWADGIARAWAQTGQGDRTVVAVIGDGALTGGMAWEAVNNIAAGRDRRVVI
+VVNDNGRSYAPTVGGVAEHLGGLRRGVLDKVRTHHRYEQTLDYLKRRLQEAGLAGELVYR
+PLHAAKKGLKDLWAPQGLFEDLGMKYIGPVDGHDLTAMEEALEDARAYGGPVIVHAMTEK
+GHGYAPAVAHEADQFHAIGVIDPSTGEPITSSTAQSWTSVFGEEMVAIADERPDVVAITA
+AMQNPVGLAPMALAHPDRVFDVGIAEQHAVTSAAGMAFGGLHPVVAVYATFLNRAYDQVL
+MDVGLHRAGVTFVLDRAGVTGPDGPSHHGMWDLALLQSVPGLRISAPRDADTLREELREA
+VAVEDAPTVVRFAKGSVGEPVRALERLSDGTDVLARRGEAGGRDGAERDVLIVAVGAMAE
+LGLDVAERLERHGISATVIDPRWVLPVARSVIDTAARHRIVVCLEDGVRAGGVGSRIRQE
+MRAAGVDTALNEVGLPVEFLAHGSREQVLARVGLTAQRITQDTVAQVLGAKVPYARPVPE
+DAAAPHHQEQA
+>4_1196
+MEHLPPTSPGAPLLPQIARPADLSALTEDQLTALAAEIRAYLIAHVSKTGGHLGPNLGVV
+ELTLAVHRVFESPKDAVIFDTGHQSYVHKLLTGRQDFTTLRQEGGLSGYGDRTESEHDVV
+ESSHASSSLSWADGIARAWAQTGQGDRTVVAVIGDGALTGGMAWEAVNNIAAGRDRRVVI
+VVNDNGRSYAPTVGGVAEHLGGLRRGVLDKVRTHHRYEQTLDYLKRRLQEAGLAGELVYR
+PLHAAKKGLKDLWAPQGLFEDLGMKYIGPVDGHDLIAMEEALEDARAYGGPVIVHAMTEK
+GHGYPPAVAHEADQFHAIGVIDPSTGEPITSSTAQSWTSVFGEEMVAIADERPDVVAITA
+AMQNPVGLAPMALAHPDRVFDVGIAEQHAVTSAAGMAFGGLHPVVAVYATFLNRAYDQVL
+MDVGLHRAGVTFVLDRAGVTGPDGPSHHGMWDLALLQSVPGLRISAPRDADTLREELREA
+VAVEDAPTVVRFAKGSVGEPVRALERLSDGTDVLARRGEAGGRDGAERDVLIVAVGAMAE
+LGLDVAERLERHGISATVIDPRWVLPVARSVIDTAARHRIVVCLEDGVRAGGVGSRIRQE
+MRAAGVDTALNEVGLPVEFLAHGSREQVLARVGLTAQRITQDTVAQVLGAKVPYARPVPE
+DAAAPHHQEQA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001083.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001083.fa
new file mode 100644
index 0000000000000000000000000000000000000000..29189d3b4e67c90235c1ec4c41171e5f1baeb319
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001083.fa
@@ -0,0 +1,16 @@
+>0_1571
+MGGAAAAALAAAANPLMPTPVEAVLGWGLSLAVGALWIAGFVSLSRGPLDARGRLPWAGA
+MLLLPVLGALIWFWWRHRYYPARRREQPGWDPNDRGAVVVPPRRGRPVPSGIGRPDPNAG
+VAAPKGLAPRRRYGAERD
+>1_1236
+MAGALTGAAAATPLVPTPGEAALGWTVSVVAGALWVAGFVSLGRSPLDARARLPWVGLML
+LLPVLGALIWFWWRHRYYPARRREQPAWDPNDRSAVVVPPRRRYGAPEE
+>2_1467
+MEPWLGWTLSAVVGTIWVAGLVSLLRGPLDERRRLPWALAMVVLPVIGAGAWFWWRHRHY
+PARKAAEPGWDPNRRDPVVLPPARSGRAAPTAIGRPDPWAGHAPHPDRLPTRRYGAPED
+>3_964
+MAGALTGAAAATPLVPTPGEAALGWTVSVVAGALWVAGFVSLGRSPLDARARLPWVGLML
+LLPVLGALIWFWWRHRYYPARRREQPAWDPNDRSAVVVPPRRRYGAPEE
+>4_1193
+MAGALTGAAAATPLVPTPGEAALGWTVSVVAGALWVAGFVSLGRSPLDARARLPWVGLML
+LLPVLGALIWFWWRHRYYPARRREQPAWDPNDRSAVVVPPRRRYGAPEE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001085.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001085.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ecb406c3b2a5bab9869950185eb9cb5f245e4485
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001085.fa
@@ -0,0 +1,25 @@
+>0_1573
+MTDPAPVRPSLDLTPFERWEAVTLDGEHVGFLHRVLDGTLLTTRMGFAPTPAQRRARPEL
+PERYLAQSQVSFTADGTSWDWTSHEDSAGAQRVRIDRERAGLDADVLPSYAEYLLLAVAA
+ADGPVVVAARLEESSPLQGGLRMPRAELRPADAGDGDVSVTVVADGAALGAHLVRDGAVV
+ASDWGGGTASTPVAGRAEATEGLDEHVVTFSGMPLV
+>1_1234
+MTDPAPRPTGAARFDLTPFERWEAVTLDDVHVGFLHRVLEDGVLTTRTGFAPTTAQRAAR
+DGLPERYLAQTQVGFTPDGDGWAWTTHEDSAGAQRVRIDRERAGIDAAVLPSYAEYLLLA
+RVAAEGPLAVDRLEEASPLQGGLRVPRAELRPADAGGSDVRVAVVADGVELGAHLVREGA
+VVASDWGGGTASTPVADQAAATAGLDAHVVTFAGLPIA
+>2_1469
+MSARYDLTPFETWEAVALDGVHAGFLHRRLADGILTTRMAFQPTGAQRRERADLPQRYLA
+QARVRFSADGSTWEVCDFEDSLTTQNVRIARERAGLGAEVVPSWAEHLLITAQRTPEHDG
+APYLRLEESSPLQGPVRMPPAVLRIGAREAVPAAGPAGSEAGQARPEGLRVEVVSEGHVL
+AVHWLGEPATEGRRPLVASDWGGGTVSVPVATAAEALEGLPADLHTFAQLPTD
+>3_962
+MTHPAPRPTGAARFDLTPFERWEAVTLDDVHVGFLHRVLEDGVLTTRMGFAPTPAQRAAR
+GGLPERYLAQTQVGFTPDGDGWAWTTHEDSAGAQRVRIDRERAGIDAAVLPSYAEYLLLA
+RVAAEGPLAVDRLEEASPLQGGLRVPRAELRPADAGGSDVRVAVVADGVELGAHLVREGA
+VVASDWGGGTASTPVADQAAATAGLDAHVVTFAGLPIA
+>4_1191
+MTHPAPRPTGAARFDLTPFERWEAVTLDDVHVGFLHRVLEDGVLTTRMGFAPTPAQRAAR
+GGLPERYLAQTQVGFTPDGDGWAWTTHEDSAGAQRVRIDRERAGIDAAVLPSYAEYLLLA
+RVAAEGPLAVDRLEEASPLQGGLRVPRAELRPADAGGSDVRVAVVADGVELGAHLVREGA
+VVASDWGGGTASTPVADQAAATAGLDAHVVTFAGLPIA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001086.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001086.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fff3e241ef77d331c14e25020d8566455b62b841
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001086.fa
@@ -0,0 +1,34 @@
+>0_1574
+MILHIALPEDWAAARAAGHYTVSTRGATVDRVGFLHASEDAAQVGIVGPAVYADRPDAVV
+LAMDEAALEAAGLTVRREPGVPGDPHSPLFPHVYGGPVPVGLMTPLPRADVDPRVVREDD
+AEAIRLQDAGWTPASTSWGARLHLADDADLAPYERRVAAVRAAGFQVRRLTPDDVGQVRR
+LDGETAADYPATAASSHSPLPEDLAVRLTLPGHRGYGAFRDGVLAGFTLLDRLDDRWDVD
+RTAVHPTGRRRGLAAAVKALSVLETHREDGARTWGTGGAGANAGSLAMNRKLGFELEPLW
+LALVPALTWPEAAATSGTP
+>1_210
+MILHITLPEDWAAARRTGRYTASTRGASIDDVGFLHASDDAAQVGVVGAAIYPDRPDAFV
+CGLDEDELAGAGLRVRREPGDPSDPHSAEFPHVYPDEAVSGHIPCSMLTPVTDPRADARV
+HREDSAEAAALLDAGWSVRSRSWGARLHLDDDADLAPYRGHVAAAEARGIEVRRLTAVDL
+PALRALDEEAAPRFPRTDGSRHEPLPDDLEARLSTPAGLAVGAFEGGVLIGFTLTFRSPD
+RWEVDRTAVASEHENRGVAKAVKAATLLATHARGGRQWGTGGAEANAASLRMNTALGFRL
+EPAWLGLTPPMTWEEFARAPASSSLDDKVT
+>2_599
+MILHLTLPEDWAAARAAGVYTASTRGAGIAEVGFLHASEDERQAGAVAAAFYADRPDAFL
+VALDEDALAAAGLEVRREPGNPADPQSELFPHVYGGPIPVALMRPLRPSLTLRPYAPDDA
+AATLDVFRAAVTGTAAAHYTPEQIRAWCPADVDADAWAARRAAAWTVVAVDGAGRVLGFA
+DLTADGVLDMLFVHPEAGGRGASHLLVGAVLAEARRRGLLRVDVRASRSARPVLEALGFT
+VDGEDPGNTVRGVVVPNTRMHADLAGSAGSPAPPGLWS
+>3_2155
+MILHITLPEDWAAARRTGRYTASTRGASIDDVGFLHASDDAAQVGMVGAAIYPDRPDAFV
+VGLDEDELAGAGLRVRREPGDPSDPHSAEFPHIYPDEAVSGHIPCSMLTPVTDPRADARV
+HREDSAEAAALLDAGWSVRSRSWGARLHLDDDADLAPYRGHVAVAEARGIEVRRLTAVDL
+PALRALDEEAAPRFPHTDGSRHEPLPDDLEARLSTPEGLAVGAFQGGVLIGFTLTFRSPD
+RWEVDRTAVASEHENRGVAKAVKAATVLATHARGGREWGTGGAESNAASLRMNAALGFRL
+EPAWLGLTPPTTWEEFARAPASSSLDDKVT
+>4_211
+MILHITLPEDWAAARRTGRYTASTRGASIDDVGFLHASDDAAQVGMVGAAIYPDRPDAFV
+VGLDEDELAGAGLRVRREPGDPSDPHSAEFPHIYPDEAVSGHIPCSMLTPVTDPRADARV
+HREDSAEAAALLDAGWSVRSRSWGARLHLDDDADLAPYRGHVAVAEARGIEVRRLTAVDL
+PALRALDEEAAPRFPHTDGSRHEPLPDDLEARLSTPEGLAVGAFQGGVLIGFTLTFRSPD
+RWEVDRTAVASEHENRGVAKAVKAATVLATHARGGREWGTGGAESNAASLRMNAALGFRL
+EPAWLGLTPPTTWEEFARAPASSSLDDKVT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001092.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001092.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5340ced5a9daece378fc26178aa7e436261e48ec
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001092.fa
@@ -0,0 +1,65 @@
+>0_1581
+MTPTPASSVLPADHPLATPSELPYGLPDFSAVTDAQLAEAVRAGMAAQRAEVEQILGAAT
+APTFENTVRAFELSGQLLRRSAAMFFTLVSADGTDARQGLAEELSPELAAHEDALLLDPR
+LAERVAAIDGAGLTGEDARLLEVLRRRLDLAGAGLGEAERAELGRINTELAGLTAAYTRR
+LVADTAERAVLVTDRERLAGLSEDDLASAAAAAREAGHGGADGEGGDEAGPWLLTLSLFT
+SQPWLASLEDEALRREVFEASVGRGAAGDHETLSTAMEVVRLRLRKARLLGSASWAEHAL
+KDRAAPSTTAVEELLATMAPRAMANARTDAATAAAHAGRVGGAVAPWDWPALSAAYARER
+FAVDAGALRPHFELDRVLHAGVFAAATALYGITFEERPELAGRLYRPGIRVFEVRDEDGA
+GVGLFVADLFARSTKSGGAWMHTVRDAADALDERPVVFNTMNVPAPAPGRPALLTLDEAT
+TLFHEFGHALHGLLAKGEYVSLSGTHVPRDVVEFPSQVNEVWLREPALLAEYARHVETGE
+PLPAGTLERLEAADLWGEGYRTVEYLGATLVDWAWHSLTEDTVEAATADPAAFERRVLTE
+AGIDPELVPPRYGTGYFKHIFGNDYAAGYYSYIWAEVLDADAVEWFREHGGMTRENGRRF
+AEELLSRGETRDLLESYRAFRGRDAELEPLLRRRGLVDAAA
+>1_1228
+MTHTSAPSVLPADHPLATPSDLPYGLPDFSAVSDAQLAEAVRAGMAAQRAEVDQILGAAT
+APTFENTVRALELSGQLLRRSAAMFFTLVGSDGTDARQALAEELSPELAAHEDAILLDPR
+LAARVASIDDGGLTGEDARLLETLRLRLSLAGADLDEAAREELRGINTELASLSAAYTRR
+LVADTAARAVLVTDRERLAGLSEDDLAAAAGAAAEAGHGDGDAAAGPWLLTLSLFTSQPW
+LASLQDEGMRREVFEASTGRGGSGEHETLTTAMAMVRLRLRKARLLGAQSWAEQALKDRA
+APSTAAVEELLAAMAPRAMANARADAATAAAHAGRADAEVAPWDWPALSAGYAREEFAVD
+ADALRPYFELDRVLTEGVFAAATALYGLTFAERPELARHLYRPGIRVFEVTGEDGAGVGL
+FVADLFARPTKSGGAWMHTVRDRADALGERPVVFTTMNVPAPAAGRPALLTLDETTTLFH
+EFGHALHGLLARGEYASLTGTNVPRDVVEFPSQVNEVWLREPSLLAAYARHVETGEPLPA
+GTLERLEAADLWGEGHRTVEYLGATLVDWAWHSLTEETVDAATADPAAFERRVLTEAGID
+PDLVPPRYGTGYFKHIFGGGYAAGYYSYVWAEVLDADAVEWFREHGGMTRENGRRFADEL
+LSRGDTRDLLESYRAFRGRDAELEPLLRRRGLADAAA
+>2_1476
+MTQITHRLPAGHPLLSPSPLPHGLPDFAAVSDADLATGMRQGMAEQRAEVEEILSSPEAP
+TFENTVRALELSGALLRRVAPMFSTLVGSDGTDARQALAEELSPELAAHEDAILLDPRLS
+ARVAAVDDAGLAGEDARLLERTRTRLEIAGAGLDEAGRAELARLNGELATLSAAYTRRLV
+ADTAARAVLVTDRERLAGLRADDLAAAAERAAAEAGHRRADAAEGAGPWLLTLSLFTSQP
+WLADLEDAGLRREVFEASVGRGSSGEHETLTTAMRIVRLRLEKARLLGAASWAEHALRDR
+AAPSVAAVEGLLGSLTGPAMANARRDAEAVAEGDAPVVPWDWPFLSAAHAREAFDVDAGA
+LRPWFELDRVLTRGVFAAATALYGLRFAEREDLAGHLYRPAIRVWEVTDEDGRGVGLFVG
+DFFARPTKSGGAWMHNVVDASAALGTRPVVFCTMNVPAPAEGRPALLTLDEATTLFHEFG
+HVLHGLLAEGEYPSLTGTAVPRDTVEFPSQVNEVWLREPSLLADYARHVETGAELPTGTL
+ERLEAADLWGEGYRTVEYLGATLLDWAWHTLTEDTVDAATADPAGFERRVLTEAGIDVDL
+VPPRYGTGYFKHVFGNDYAAGYYSYIWAEVLDADAVEWFREHGGLTRENGRRFAEELLSR
+GDTRDVLESYRAFRGRDAELEPLLRRRGLLPEGA
+>3_956
+MTHTSAPSVLPADHPLATPSDLPYGLPDFSAVSDAQLAEAVRAGMAAQRAEVDQILGAAT
+APTFENTVRALELSGQLLRRSAAMFFTLVGSDGTDARQALAEELSPELAAHEDAILLDPR
+LAARAASIDDGGLTGEDARLLETLRLRLSLAGADLDEAAREELRGINTELASLSAAYTRR
+LVADTAARAVLVTDRERLAGLSEDDLAAAAGAAAEAGHGDGDAAAGPWLLTLSLFTSQPW
+LASLQDEGMRREVFEASTGRGGSGEHETLTTAMAMVRLRLRKARLLGAQSWAEQALKDRA
+APSTAAVEELLAAMAPRAMANARADAATAAAHAGRTDAEVAPWDWPALSAAYAREEFAVD
+ADALRPYFELDRVLTEGVFAAATALYGLTFAERPELARHLYRPGIRVFEVTGEDGAGVGL
+FVADLFARPTKSGGAWMHTVRDMADALGERPVVFTTMNVPAPAAGRPALLTLDEATTLFH
+EFGHALHGLLARGEYASLTGTNVPRDVVEFPSQVNEVWLREPSLLAAYARHVESGEPLPA
+GTLERLEAADLWGEGHRTVEYLGAALVDWAWHSLTEETVDAATADPAAFERRVLTEAGID
+PDLVPPRYGTGYFKHIFGGGYAAGYYSYVWAEVLDADAVEWFREHGGMTRENGRRFADEL
+LSRGDTRDLLESYRAFRGRDAELEPLLRRRGLADAAA
+>4_1185
+MTHTSAPSVLPADHPLATPSDLPYGLPDFSAVSDAQLAEAVRAGMAAQRAEVDQILGAAT
+APTFENTVRALELSGQLLRRSAAMFFTLVGSDGTDARQALAEELSPELAAHEDAILLDPR
+LAARAASIDDGGLTGEDARLLETLRLRLSLAGADLDEAAREELRGINTELASLSAAYTRR
+LVADTAARAVLVTDRERLAGLSEDDLAAAAGAAAEAGHGDGDAAAGPWLLTLSLFTSQPW
+LASLQDEGMRREVFEASTGRGGAGEHETLTTAMAMVRLRLRKARLLGAQSWAEQALKDRA
+APSTAAVEELLAAMAPRAMANARADAATAAAHAGRTDAEVAPWDWPALSAAYAREEFAVD
+ADALRPYFELDRVLTEGVFAAATALYGLTFAERPELARHLYRPGIRVFEVTGEDGAGVGL
+FVADLFARPTKSGGAWMHTVRDMADALGERPVVFTTMNVPAPAAGRPALLTLDEATTLFH
+EFGHALHGLLARGEYASLTGTNVPRDVVEFPSQVNEVWLREPSLLAAYARHVESGEPLPA
+GTLERLEAADLWGEGHRTVEYLGAALVDWAWHSLTEETVDAATADPAAFERRVLTEAGID
+PDLVPPRYGTGYFKHIFGGGYAAGYYSYVWAEVLDADAVEWFREHGGMTRENGRRFADEL
+LSRGDTRDLLESYRAFRGRDAELEPLLRRRGLADAAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001094.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001094.fa
new file mode 100644
index 0000000000000000000000000000000000000000..dbdcfbf36185054f36f702b7b62b1065a6bcef66
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001094.fa
@@ -0,0 +1,25 @@
+>0_1583
+MVDVDARRRAALVHVEVAGTPPTASLDQRLLRIDEAVSAVLTAHAPDRAAVERMFANTNT
+PTVLGTAQAAGVAIAAAARAGIPVGLHTPSEVKAAVTGYGDAGKEQVTTMITRILGLDAP
+PRPADAADALALAIAHGWRGTALGAAAGQTGLDTSDLASRAGRSQFAAGTRSRGGRRGEL
+TAAQRAWLDAERSAGGGCR
+>1_1226
+MDPGLTRCGIAVVDVDARRRAALVHVEVTGTPPTAPLDQRLLRIDEAVSAVLAAHRPDRA
+AVERMFANTNTPTVLGTAQAAGVAIAAAARAGVPVGLHTPSEVKAAVTGHGDAGKEQVTT
+MVTRILRLDAPPRPADAADALALAIAHGWRGTALGAAAGQTGLDTADLASRAGRSQFAAK
+APARARQRGQLTAAQRAWLDAERSAGGGRRR
+>2_1478
+MTDRPAGVVRVLGVDPGLTRCGIAVVDVDARRRAELVHVEVAGTAPEESLDARLLCIDRA
+VSAVLVRFRPERAAVERMFANNNTPTVLGTAQAAGVAIAAAARAGVPVGLHTPSEVKAAV
+TGNGDAGKEQVTTMVTRILRLDAPPRPADAADALALAIAHAWRGTALGRAAGHTGLDTSG
+LASRTGASRGAAGARVRRAPKAALTPAQQAWLAAERSAGARPGRRSAG
+>3_954
+MDPGLTRCGIAVVDVDARRRAALVHVEVTGTPPTAPLDQRLLRIDEAVSAVLAAHRPDRA
+AVERMFANTNTPTVLGTAQAAGVAIAAAARAGVPVGLHTPSEVKAAVTGHGDAGKEQVTT
+MVTRILRLDAPPRPADAADALALAIAHGWRGTALGAAAGQTGLDTADLASRAGRSQFAAK
+APARARPRGQLTAAQRAWLDAERSAGGGRRR
+>4_1183
+MDPGLTRCGIAVVDVDARRRAALVHVEVTGTPPTAPLDQRLLRIDEAVSAVLAAHRPDRA
+AVERMFANTNTPTVLGTAQAAGVAIAAAARAGVPVGLHTPSEVKAAVTGHGDAGKEQVTT
+MVTRILRLDAPPRPADAADALALAIAHGWRGTALGAAAGQTGLDTADLASRAGRSQFAAK
+APARARPRGQLTAAQRAWLDAERSAGGGRRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001096.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001096.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a4885cccdb137d46ac99a062a532a2dc252841c2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001096.fa
@@ -0,0 +1,20 @@
+>0_1586
+MPVATAATLPVIAQQAQGGGGSMLMLIAFAMLAVMLFLSFRKGKKVQQQQAEMRSTLAPG
+VEVMTGAGIFGTVVSVDAENQRVTIETAPGTRMDVHLQGVTNVVEPTAAAAATPADDEAR
+LDRAPGAEYGAQQPVVEPRADDAVDPRDRRGDLA
+>1_1223
+MPVATAATLPVIAQQAQGGGGSLLMLIAFALLAVMLFLSFRKGKKMQQQQAQMRSTLAPG
+VEVMTGAGIFGTVVAVDTEGQRVTLETAPGTRMDVHLQGVTTVVEPETTAAPTTDPSRLD
+DAPGTEYRADDADDPRPRRDDLA
+>2_1481
+MPLTPLAPVLADDAAGGGNVLVLAMFAALAVMLFLSFRRGKKAQAEAADMRARLTPGQEV
+MTGAGIFGRVVAVDAAAQRVTLETAPGTRMDVHLQGIVKIEEPDVAPAADTAPAVGGAHA
+AETAPAADDTDRA
+>3_951
+MPVATAATLPVIAQQAQGGGGSLLMLIAFALLAVMLFLSFRKGKKMQQQQAQMRSTLAPG
+VEVMTGAGIFGTVVAVDTEGQRVTLETAPGTRMDVHLQGVTTVVEPETAAAPTTDPSRLD
+DAPGTEYRADDADDPRPRRDDLA
+>4_1180
+MPVATAATLPVIAQQAQGGGGSLLMLIAFALLAVMLFLSFRKGKKMQQQQAQMRSTLAPG
+VEVMTGAGIFGTVVAVDTEGQRVTLETAPGTRMDVHLQGVTTVVEPETAAAPTTDPSRLD
+DAPGTEYRADDADDPRPRRDDLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001100.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001100.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f54cf6fcf016724055610332c67314898672891b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001100.fa
@@ -0,0 +1,25 @@
+>0_1590
+MEGLILAGEPFTPAELQALGSRGVVVPLVPGVWARPEAARRPGVRAEALWMLGGPVLAGG
+WTAIGSSAAWVLTGGAVPERLHAAVPHFHRLPAGGSPLPWTLTQSDVAAGPDGRAPAEED
+VLRIGPLRVTTPERTVEDLLLSPDPDAARTAAAVIAAHGAAGLRERLARHSRRSGVVAAR
+RRLDVLLGALEAAG
+>1_1219
+MTTVTIEETAPAGALMLAGDPFTEPELQALGARGAVRPLLPGVWARPDAADDPAVRAAAL
+WTLGGPLLAAGWTAIGPSAAWILAGGAAPGRLHAAVPHFHRRPAGGGQLPWTLTQSDVAA
+DATGVAPAEQDVLRFGPVRVTTPARTVEDLLLSADPDAARRAAAVIGAHGAAGLRERLAR
+RTRRAGVVAARRRLGALLTALDVPD
+>2_1485
+MHQGHGSRGGAAWELAGMTFTEPELRLLAARGTLEAVLPGVYRPVDVPSEPAGRAAALGL
+LGGPVLASGWTAVGPSAAWVHVGGPAPHRLHAAVPHFHRLPAGGAAPAWRLVQSDVAAGP
+TGAAPAEEDVQVLEGVRVTVPARTVEDLLLTGDPDDARRAARVIAAHGAEGLRDRLDRPS
+RRPGSVGARRRLRMLLDALGADG
+>3_947
+MTTVTIEETAPTGALVLAGDPFTEPELQALGARGAVRPLLPGVWARPDAADDPAVRAAAL
+WTLGGPLLAAGWTAIGPSAAWILAGGAAPGRLHAAVPHFHRRPAGGGLLPWTLTQSDVAA
+DATGVAPAEHDVLRFGPVRVTTPARTVEDLLLSADPDAARRAAAVIGAHGAAGLRERLAR
+RTRRAGVVAARRRLGALLAALDVPD
+>4_1176
+MTTVTIEETAPTGALVLAGDPFTEPELQALGARGAVRPLLPGVWARPDAADDPAVRAAAL
+WTLGGPLLAAGWTAIGPSAAWILAGGAAPGRLHAAVPHFHRRPAGGGLLPWTLTQSDVAA
+DATGVAPAEHDVLRFGPVRVTTPARTVEDLLLSADPDAARRAAAVIGAHGAAGLRERLAR
+RTRRAGVVAARRRLGALLAALDVPD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001103.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001103.fa
new file mode 100644
index 0000000000000000000000000000000000000000..aaf8b654156e8a10db21cad2899f169b0acf81f9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001103.fa
@@ -0,0 +1,45 @@
+>0_1593
+MLQRRLTLTHAVVIGLGSMIGAGVFTAIGLAAALTGGHPGLLYAALALALLTALCNALST
+AQLATVHPESGGAYVYGRRQLHPLAGFVAGWGFVTGKTASVAAMAATIGLYLFPDDAAAA
+RLTGVAAVVVLTAVAMAGVTRTAQATMAILVPVAAVLALAIGAGLALGAPSEADAFAGVA
+DSPVTGVLMGAGILFFAFAGYARVATMGEEVIDPRRSIPRAILIALGLTAGLYVLLTAAL
+FAGLGPTGLALSPAPVRELLETTLGATWGWAALAGAALAAAGAALNLLTGISRTALAMAR
+ESDLPRPLARVNARTGTPWVGQLTIAVAVILLLLTTDILTVVGFSSFGVLVYYAVANLAA
+ATLRGGEDGRDPALPRPLRVPRAVNVLGLVLCAVLAATLPPMAVVAMLAVFLVGVGGRAF
+VLAGRGRPGRRGAVAP
+>1_1216
+MTAALQRRLTLLHAVAIGLGSMIGAGVFTAIGLAAALTGGHPGLLYGALAVAAVAALCNA
+LSTAQLATVHPESGGAYVYGRRQLHPWAGFVAGWGFVTGKTASVAAVAATLGLYLVPDDA
+AAARWTGVAAVVVLTGVAMAGVTRTAQATLAILVPVLAVLVLAIGAGLAREAPGGSAAAL
+GVDSPVQGVLMGAGVLFFAFAGYARVATMGEEVIDPARTIPRAILIALAVTVALYLLLAT
+ALISGLGTSGLARSPAPVRELLETALGSGWGWVAVAGAALAAAGAMLTLLTGISRTALAM
+AREADLPRPLARVHAGTGTPWTAQLTVAAAVVLLLLTTDILTVVGFSSFGVLVYYAVANL
+SALTLRGDDHGHRPARPRPLRVPRAVNVLGLALCLLLAFSLPPMSVAAMAGVFLIGVGGR
+AFVRAGRRGG
+>2_1490
+MTATSPAPRGLPLRGALAIGVGSMVGAGAFTSLGLAALLTGGHVGALAAALGLAVAVATC
+NALSTAQLAAVHPASGGTYVYGRRQIGPTAGFVAGWGFVTGKTASVAAMATTAGLYLFPD
+SPLAARLAGAAAVVILTAVALRGITRTAQATVAILVPVLAVLGLTIVAGLAGGRAAADTP
+VSAADPAGVLAAAGVLFFAFAGYARVATMGEEVEDPRRTIPRAVLGALAFTVVLYALLAA
+ALVAALGGTGLAASEAPVRATLEASLGAGWGWAAVVGAVLACAGAMLNLLAGISRTGMAM
+AREGDLPRPLARVDERTAVPWAGQVTVAVAVILLVLTTDVLTVVGFSSFGVLVYYAVANL
+SALTLRPEQRTLRVPRAVNVLGLGLCLVIAFTLPPASVAAMVGVFLIGLGGRWFVRSRRP
+DRIG
+>3_944
+MTAALQRRLTLLHAVAIGLGSMIGAGVFTAIGLAAALTGGHPGLLYGALAVAAVAALCNA
+LSTAQLATVHPESGGAYVYGRRQLHPWAGFVAGWGFVTGKTASVAAMAATLGLYLFPDDD
+AAARWTGVAAVVVLTGVAMAGVTRTAQATLAILVPVLAVLVLAIGAGLAREAPGGSAAAL
+GVDSPVQGVLMGAGVLFFAFAGYARVATMGEEVIDPARTIPRAILIALAVTVALYLLLAT
+ALISGLGTSGLARSPAPVRDLLETALGSGWGWVAVAGAALAAAGAMLNLLTGISRTALAM
+ARESDLPRPLARVHAGTGTPWTAQLTLAAAVILLLLTTDILTVVGFSSFGVLVYYAVANL
+SALTLRGDDDGRRPARPRPLRPLRVPRAVNVLGLALCLLLALSLPPMSVAAMAGVFLIGV
+GGRAFVRAGRRGR
+>4_1173
+MTAALQRRLTLLHAVAIGLGSMIGAGVFTAIGLAAALTGGHPGLLYGALAVAAVAALCNA
+LSTAQLATVHPESGGAYVYGRRQLHPWAGFVAGWGFVTGKTASVAAMAATLGLYLFPDDA
+AAARWTGVAAVVVLTGVAMAGVTRTAQATLAILVPVLAVLVLAIGAGLAREAPGGSAAAL
+GVDSPVQGVLMGAGVLFFAFAGYARVATMGEEVIDPARTIPRAILIALAVTVALYLLLAT
+ALISGLGTSGLARSPAPVRDLLETALGSGWGWVAVAGAALAAAGAMLNLLTGISRTALAM
+ARESDLPRPLARVHAGTGTPWTAQLTVAAAVILLLLTTDILTVVGFSSFGVLVYYAVANL
+SALTLRGDDDGRRPARPRPLRVPRAVNVLGLALCLLLALSLPPMSVAAMAGVFLIGVGGR
+AFVRAGRRGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001105.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001105.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ff0bd036fb797991fda99d93c12087b6ad3b6d40
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001105.fa
@@ -0,0 +1,20 @@
+>0_1596
+MRAVLQRARSASVTVAGEVVGSFEGAGLVILLGVSTQDTGAEADALAAKVATLRMLDGEA
+SLVSAGAPALVVSQFTLYGDVRKGRRPSWTGAARPEHAEPLYERFAAGLEAEGVRVERGV
+FGAQMDVTLVNDGPFTLVVDTADLTGPRRG
+>1_1214
+MRAVLQRARSASVTVDGKVVGSFEGEGLVILLGVTVDDTEAEAVQVARKVAGLRMLDGER
+SLTDAGAPALVVSQFTLYGDVRKGRRPSWTRAAKGNQAEPLYERFTAELEAAGVRVERGV
+FGAKMDVSLTNSGPFTLIVDSDELAGPRRG
+>2_1492
+MRAVLQRARSASVTVDGEVVGAFDGEGLVILLGVSTEDTEAEAVQLAAKVAGLRILDGER
+SLVEASAPALVISQFTLYGDVRKGRRPSWSAAARGDQAEPLYECFAGELGTAGVRVERGV
+FRADMDVALTNAGPFTLVVDTADLAGPRRG
+>3_942
+MRAVLQRARSASVTVDGKVVGSFEGEGLVILLGVTVDDTEAEAVQVARKVAGLRMLDGER
+SLTDAGAPALVVSQFTLYGDVRKGRRPSWTRAAKGNQAEPLYERFTAELEAAGVRVERGV
+FGAKMDVSLTNSGPFTLIVDSDELAGPRRG
+>4_1171
+MRAVLQRARSASVTVDGKVVGSFEGEGLVILLGVTVDDTEAEAVQVARKVAGLRMLDGER
+SLTDAGAPALVVSQFTLYGDVRKGRRPSWTRAAKGNQAEPLYERFTAELEAAGVRVERGV
+FGAKMDVSLTNSGPFTLIVDSDELAGPRRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001107.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001107.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c87a21782e3d46bf023822ad891d09105dc70395
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001107.fa
@@ -0,0 +1,45 @@
+>0_1598
+MADLFSAAHESDDDGPSGTVAAPRASAPLAVRMRPRTLEEVLGQRHLMRPGSPLRKLAEP
+DPGSPAGPSSVILYGPPGIGKTTLAHVIARAPGRTFTELSAITAGVKDVRQVMEQAQRER
+DLYDRTTVLFLDEIHRFSKAQQDALLPGVENRWVVLVAATTENPSFSVIAPLLSRSLLLT
+LRPLTDEDIVGLVERAVADERGLNGAVDLADDARDYVVRMAGGDARRALTVLEAAAGVAL
+DKARQAGADEDAGGDGGARAGAAAPVTVTEEDAAQAMDHHVQRYDKDGDQHYDVISAFIK
+SIRGSDVDAALHWLARMLEAGEDPRFIARRLIISASEDVGMADPTALQTAVAAAQAVQLI
+GMPEGRIILGQAVTHLATAPKSNASYAAVNEALADVRAGGTGQVPPHLRDAHYPGAAALG
+HGKGYVYSHDEPHAVARQQYAPDPLVGKDYYRPKPIGAEKRLVDQVAALRRITRGE
+>1_1211
+MDDLFSAAHTGADDDGPAGTVAAPHPGAPLAVRMRPRTLDDVLGQRHLMRPGSPLRKLAE
+PDPDSAAGPSSVILYGPPGIGKTTLAHVIARAPGRTFTELSAITAGVKDVRQVMEQAQRE
+RDLYGRTTVLFLDEIHRFSKAQQDALLPGVENRWVVLVAATTENPSFSVIAPLLSRSLLL
+TLRPLTDDDIVGLLDRAVTQERGLNGAVVLEDDARDYLVRMAGGDARRALTVLEAAAGVA
+LDKAREAGRAGEGAVAVTEEDAAQAMDHHVQRYDKDGDQHYDVISAFIKSIRGSDVDASM
+HYLARMLEAGEDPRFIARRLIISASEDVGMADPTALQTAVATAQAVQLIGMPEGRIILAQ
+AVTHLATAPKSNASYTAVNEAIADVRAGHTGAVPAHLRDAHYPGAAALGHGQGYVYSHDE
+PHAVARQQYAPDPLVGRDYYRPKPIGHEKRLTEQVAALRRIIRGD
+>2_1496
+MDDLFSAAHADPDDDAPVTASGRARASAPLAVRMRPRSLDEVLGQAHLKQPGSPLRKLAE
+PAASAQAAGPSSVILYGPPGIGKTTLAHVIARAPGRTFTELSAITAGVKDVRQVMEQARR
+EREMYDRTTVLFLDEIHRFSKAQQDALLPGVENRWVVLVAATTENPSFSVIAPLLSRSLL
+LTLRPLDDTDLAALVDRAVADERGLNGTVEPTPNARDYVVRMAGGDARRALTVLEAAAGV
+ALDRAEARGETTGPGSAPVEVTEEDAAQAMDAQVQRYDKDGDQHYDVISAFIKSIRGSDV
+DAAMHWLARMLEAGEDPRFIARRLIISASEDVGMADPTALQTAVAAAQAVQLIGMPEGRI
+VLGQAVTHLATAPKSNASYTAVNEAIADVRAGGTGVVPAHLRDSHYPGAKALGHGQGYVY
+SHDEPHAVARQQYAPDPLVGRDYYRPKPIGHERQLGPQVDALRRIIRGD
+>3_939
+MDDLFSAAHNGADDDGPAGTVAAPHPGAPLAVRMRPRTLDDVLGQRHLMRPGSPLRKLAE
+PDPDSAAGPSSVILYGPPGIGKTTLAHVIARAPGRTFTELSAITAGVKDVRQVMEQAQRE
+RDLYGRTTVLFLDEIHRFSKAQQDALLPGVENRWVVLVAATTENPSFSVIAPLLSRSLLL
+TLRPLTDDDIVGLLDRAVTQERGLNGAVVLQDDARDYLVRMAGGDARRALTVLEAAAGVA
+LDKAREAGRAGEGAVAVTDEDAAQAMDHHVQRYDKDGDQHYDVISAFIKSIRGSDVDASM
+HYLARMLEAGEDPRFIARRLIISASEDVGMADPTALQTAVAAAQAVQLIGMPEGRIILAQ
+AVTHLATAPKSNASYTAVNEAIADVRAGHTGAVPAHLRDAHYPGAAALGHGQGYVYSHDE
+PHAVARQQYAPDPLVGRDYYRPKPIGHEKRLTEQVAALRRIIRGD
+>4_1168
+MDDLFSAAHNGADDDGPAGTVAAPHPGAPLAVRMRPRTLDDVLGQRHLMRPGSPLRKLAE
+PDPDSAAGPSSVILYGPPGIGKTTLAHVIARAPGRTFTELSAITAGVKDVRQVMEQAQRE
+RDLYGRTTVLFLDEIHRFSKAQQDALLPGVENRWVVLVAATTENPSFSVIAPLLSRSLLL
+TLRPLTDDDIVGLLDRAVTQERGLNGAVVLQDDARDYLVRMAGGDARRALTVLEAAAGVA
+LDKAREAGRAGEGAVAVTDEDAAQAMDHHVQRYDKDGDQHYDVISAFIKSIRGSDVDASM
+HYLARMLEAGEDPRFIARRLIISASEDVGMADPTALQTAVAAAQAVQLIGMPEGRIILAQ
+AVTHLATAPKSNASYTAVNEAIADVRAGHTGAVPAHLRDAHYPGAAALGHGQGYVYSHDE
+PHAVARQQYAPDPLVGRDYYRPKPIGHEKRLTEQVAALRRIIRGD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001111.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001111.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2ab16040eb1a8b70a48264545e6f4a3ca2cc0a9c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001111.fa
@@ -0,0 +1,85 @@
+>0_1603
+MKSQEIARRWIAFFESKGHQHVPSASLVSPDPSLLFTVAGMVPFIPYFLGEQTPPSPRAV
+SVQKCIRTADIEEVGKTVRHGTFFQMCGNFSFGDYFKEKAIPMAWELLTTSVEDGGYGLD
+PERLWVTVYEEDDEAARIWEESVGVRPERIQRMGKDDNYWNTGQPGPGGPCSEIFYDRGP
+EYGADGGPAADDTRYIEIWNLVFMQYRLSAVRSKDDFDVAGELENKNIDTGLGLERLAML
+LQGVENMYETDQVRPVLDRAAELSGREYTSTEDPTDPHYEDDVRLRMVADHVRSALMLIG
+DGVRPGNEGRGYVLRRLIRRVIRALRLMGVTEPVLPELLPVSRDAMKGSYPVVADEFERI
+SRIAYAEEKAFLRTIAAGTARLDAAVGQARTAGGGIAGADAFELHDTYGFPIELTLEIAE
+ESGVAVDEAGFRALMAEQRDRARADAKAKKSGHTDTALYQRLRAEGQTHFTGYTEHTTES
+VVRGLLLDGEEVASASAGTELEVILDATPFYAESGGQAADTGLITGDGFRLEVLDVQAPV
+RGLSVHRVKVLDGEVPAGAEALGAIDLQRRLDGEKAHSGTHLVHAALHQVLGPEATQSGS
+FNKEGYLRFDFRWAESLSAGARSEVEDVVNIAIRDDHTVLTQEMSLEEARALGAMSLFGE
+KYGDRVRVVEIDGAWSRELCGGTHVGRTAQIGSLTLLGEQSVGSGNRRVEALVGLDSFRH
+LAAERTLVSELSEMFKAPAEELKDRIAASMDRLKAAEKQIAELQAKALQAQAGELAAQAQ
+DVTTASGVSVRVLARHVGEVAGDQLRGLVLDLRSRIESAGGNAAGTPVLVALTGEAKGRP
+LVVVATNEAARAAGLKAGAMVKTATGVLGGGGGGKDDVAQGGGQDVTRVGDALDAVVAAA
+RAA
+>1_1207
+MKSQEIARRWTAFFESRGHRVVPSASLVSPDPSLLFTVAGMVPFIPYFLGEQTPPSPRVV
+SVQKCIRTADIEEVGKTVRHGTFFQMCGNFSFGDYFKETAIPMAWELLTSSVEDGGFGLD
+PERLWVTVYREDDEAERIWREDVGVRPERIQRMGKEDNYWHTGQPGPGGPCSEIFYDRGP
+AYGVDGGPAADDTRYIEIWNLVFMQYRLSAVRSKDDFDVAGELEHKNIDTGLGLERLAMI
+LQGVENMYETDQVRPVLDRAAQLAGRSYTSTEDPADPHYDDDVRLRMVADHVRSALMLIS
+DGVRPGNEGRGYVLRRLIRRVVRALRLMGVTEPVFPELLPVSRDAMKGTYPVVADEFERI
+ARIAYAEEKAFLRTIAAGTARLDAAVGQARSAGGGIAGPDAFELHDTYGFPIELTLEIAE
+EAGVAVDEAGFRALMAEQRDRARADAKAKKSGHTDTAVYQRLRAEGQTHFTGYTEHTTES
+VVRGLLQNGEEVPSAGAGTELELVLDATPFYAESGGQAADTGLITGDGFRLEVLDVQAPV
+KGLSVHRVKVLDGEVAAGAQALGAIDLQRRLDGEKAHSGTHLVHAALHQILGPEATQSGS
+FNKEGYLRFDFRWAESLSAGARSEVEDVVNIAIRDDHTVLTQEMSLEEARALGAMSLFGE
+KYGDRVRVVEIDGAWSRELCGGTHVGRTAQIGSLTLLGEQSVGSGNRRVEALVGLDSFRH
+LAAERTLVSELSEMFKAPAEELKDRIGATLDRLKAAEKQVAELRAQALQAQAGQLAAQAR
+DVTTSGGTSVRVLAHHAGDVAGDQLRSLALDLRARIESAGGNAAGTPVFVALTAEAKGRP
+LVVVATNEAARAAGLKAGAMVKTATGVLGGGGGGKDDVAQGGGQDVTRVGDALDAVVAAV
+RAA
+>2_1500
+MKSHEIARRWTAYFEKQGHLVVPSASLVSPDPSLLFTVAGMVPFIPYFLGEQTPPSPRAT
+SVQKCIRTADIEEVGKTVRHGTFFQMCGNFSFGDYFKEKAIPMAWELLTTSVEDGGYGLD
+PERLWVTVYEEDDEAARIWREDVGVRPERIQRMGKADNYWNTGQPGPGGPCSEIFYDRGP
+EYGVEGGPEADDTRYIEIWNLVFMQYRLSQVRSKYDFDVAGELEHKNIDTGLGLERLAMI
+LQGVENMYETDQVRPVLDRAAELAGKSYTSTEDPADPHYDDDVRLRMVADHVRSALMLIS
+DGVRPGNEGRGYVLRRLIRRVVRALRLMGVTEPVFPELLPVSRDAMKGTYPVVADEFERI
+SRIAYAEEKAFLRTIAAGTARLDAAVGQARSAGGGIAGPDAFELHDTYGFPIELTLEIAE
+EAGVAVDEAGFHALMAEQRDRARADAKAKKSGHTDTAVYQRLRAEGQTHFTGYTEHTTES
+VVRGLLQNGEEVASAGAGTELELVLDATPFYAESGGQAADTGVITGDGFSLEVLDVQAPV
+KGLSVHRVKVLDGEVPVGAEAVGRIDLQRRLDGEKAHSGTHLVHAALHQILGPEATQSGS
+FNKEGYLRFDFRWAEAVSAMARSEIEDVVNIAIRDDHQVLTQEMSLDEARAMGAMSLFGE
+KYGDRVRVVEINGAWSRELCGGTHVGRTAQIGSLTLLGEQSVGSGNRRVEALVGLDSFRH
+LAAERTLVSDLSEMFKAPADQLKDRITATMDRLKAAEKQVADLQAKALQAQAGTLAAQAQ
+DVTTTSGASVKVLAHHAGEVAGDQLRSLVLGLRSRIESAGGNAAGTPVLVALTGEAKGRP
+LVVVATNEAARGAGLKAGAMVKLATAALGGGGGGKDDVAQGGGQDVTAVAAALDAVLDAV
+RDA
+>3_935
+MKSQEIARRWTAFFESRGHRVVPSASLVSPDPSLLFTVAGMVPFIPYFLGEQTPPSPRVV
+SVQKCIRTADIEEVGKTVRHGTFFQMCGNFSFGDYFKETAIPMAWELLTSSVEDGGFGLD
+PERLWVTVYREDDEAERIWREDVGVRPERIQRMGKDDNYWNTGQPGPGGPCSEIFYDRGP
+AYGVDGGPAADDTRYIEIWNLVFMQYRLSAVRSKDDFDIAGELEHKNIDTGLGLERLAMI
+LQGVENMYETDQVRPVLDRAAQLAGRSYTSTEDPADPHYDDDVRLRMVADHVRSALMLIS
+DGVRPGNEGRGYVLRRLIRRVVRALRLMGVTEPVFPELLPVSRDAMKGTYPVVADEFERI
+SRIAYAEEKAFLRTIAAGTARLDAAVGQARSAGGGIAGPDAFELHDTYGFPIELTLEIAE
+EAGVAVDEAGFRALMAEQRDRARADAKAKKAGHTDTAVYQRLRAEGQTHFTGYTEHTTES
+VVRGLLQNGEEVASAGAGTELELVLDATPFYAESGGQAADTGLITGDGFRLEVLDVQAPV
+KGLSVHRVKVLDGEVAAGAQALGAIDLQRRLDGEKAHSGTHLVHAALHQILGPEATQSGS
+FNKEGYLRFDFRWAEALSAGARSEVEDVVNIAIRDDHAVLTQEMSLEEARALGAMSLFGE
+KYGDRVRVVEIDGAWSRELCGGTHVGRTAQIGSLTLLGEQSVGSGNRRVEALVGLDSFRH
+LAAERTLVSELSEMFKAPAEELKDRIGATLDRLKAAEKQVAELRAQALQAQAGQLAGQAQ
+DVTTSAGTSVRVLAHHVGDVAGDQLRSLVLDLRARIESAGGNAAGTPVLVALTAEAKGRP
+LVVVATNEAARAAGLKAGAMVKTATGVLGGGGGGKDDVAQGGGQDVTRVGDALEAVVAAV
+RAA
+>4_1164
+MKSQEIARRWTAFFESRGHRVVPSASLVSPDPSLLFTVAGMVPFIPYFLGEQTPPSPRVV
+SVQKCIRTADIEEVGKTVRHGTFFQMCGNFSFGDYFKETAIPMAWELLTSSVEDGGFGLD
+PERLWVTVYREDDEAERIWREDVGVRPERIQRMGKDDNYWNTGQPGPGGPCSEIFYDRGP
+AYGVDGGPAADDTRYIEIWNLVFMQYRLSAVRSKDDFDIAGELEHKNIDTGLGLERLAMI
+LQGVENMYETDQVRPVLDRAAQLAGRSYTSTEDPADPHYDDDVRLRMVADHVRSALMLIS
+DGVRPGNEGRGYVLRRLIRRVVRALRLMGVTEPVFPELLPVSRDAMKGTYPVVADEFERI
+SRIAYAEEKAFLRTIAAGTARLDAAVGQARSAGGGIAGPDAFELHDTYGFPIELTLEIAE
+EAGVAVDEAGFRALMAEQRDRARADAKAKKAGHTDTAVYQRLRAEGQTHFTGYTEHTTES
+VVRGLLQNGEEVASAGAGTELELVLDATPFYAESGGQAADTGLITGDGFRLEVLDVQAPV
+KGLSVHRVKVLDGEVAAGAQALGAIDLQRRLDGEKAHSGTHLVHAALHQILGPEATQSGS
+FNKEGYLRFDFRWAEALSAGARSEVEDVVNIAIRDDHAVLTQEMSLEEARALGAMSLFGE
+KYGDRVRVVEIDGAWSRELCGGTHVGRTAQIGSLTLLGEQSVGSGNRRVEALVGLDSFRH
+LAAERTLVSELSEMFKAPAEELKDRIGATLDRLKAAEKQVAELRAQALQAQAGQLVGQAQ
+DVTTSAGTSVRVLAHHVGDVAGDQLRSLVLDLRARIESAGGNAAGTPVLVALTAEAKGRP
+LVVVATNEAARAAGLKAGAMVKTATGVLGGGGGGKDDVAQGGGQDVTRVGDALEAVVAAV
+RAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001113.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001113.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0d69722d5d6a83957b7ae0a3b62c054f2b757dd7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001113.fa
@@ -0,0 +1,35 @@
+>0_1606
+MGAPSDVRAEASAGAPAAPRLRAAVLGRPIAHSLSPVLHGAAYGVLGLDVDYRRRDLGED
+EVGAFVAGRLGAPRTADGGDAAARGEDWLGCSVTMPLKRAVVGCAGRVSERVRLLGTANT
+LVRDHPEHPGLVSAENTDVDGILGALASAGLAERGSGGAVGILGNGGTATAAVLAAATLG
+ADEVVFGVRDAARAAEVTALADALGLAWRTVGQPELAAAAPGLRAVVATLPPRAADPLAA
+HVPVGAALPPLLDAAYDPWPSALASAWTEAGGAVASGLSMLLHQGVEQVRLFTARPRAAA
+GMPEPDWAAVTRAAARALGPAAG
+>1_1204
+MRPVLRAAVLGRPIAHSLSPVLHAAAYRVLGLDVDYGRRDLGEDEVLAFAAEHLGAPGAA
+DGGAAAARGQDWLGCSVTMPLKRAVVAAAGHVSDRVRLLGTANTLVRDHPAAPGVVHAEN
+TDVDGILGALAAAGLDRAARGGTVGVLGNGGTATAAVLAAATLGANAVLFGVRDAARAAE
+VTALADALGLRWATLTQADLLRRAPGLRAVVATLPPRAADALAAHVPADAALPPLLDAAY
+DPWPSVLAAAWSREGGPVASGLSMLLHQGVEQVRLFTARPRAAAGMPEPDWAAVTRAAAD
+ALGPAAG
+>2_1503
+MAGATFRAAVLGRPIAHSLSPVLHAAAYRALGLDVDYGRADLGEEEVGPWLAARLGAPGS
+AARPAGPSGGDWLGVSVTMPLKPAVVPLADELSARVRELGVANTLVRDHPDHPGSLLAHN
+TDVDGIVRALAERGLDAGAGGGAVGILGNGGTATAAVAAASLLRAETVVLGVRDAGRARD
+VVALADRLGLGVRVEAQDALVRQAADLRAVVATLPPRAADPLADKVPAGVLPPLLDAAYD
+PWPSAIARAWSAAGGGVASGLSMLLHQGVEQVRLFTERPRRAAGGVEPDWAEVTAAASRA
+LGLPGR
+>3_932
+MRPTLRAAVLGRPIAHSLSPVLHAAGYRVLGLDVDYGRRDLGEDEVLAFAAEHLGAPGTA
+DGGAAAARGQDWLGCSVTMPLKRAVVAAAGHVSDRVRLLGTANTLVRDHPSAPGVVHAEN
+TDVDGILGALAAAGLDRAARGGTVGVLGNGGTATAAVLAAATLGADAVLFGVRDPARAAE
+VTALADALGLRWATLTQADLLRRAPGLRAVVATLPPRAADALAAHVPAGAALPPLLDAAY
+DPWPSVLASAWSREGGPVASGLSMLLHQGIEQVRLFTARPRAAAGMPEPDWAAVTRAAAD
+ALGPAAG
+>4_1162
+MRPTLRAAVLGRPIAHSLSPVLHAAGYRVLGLDVDYGRRDLGEDEVLAFAAEHLGAPGTA
+DGGAAAARGQDWLGCSVTMPLKRAVVAAAGHVSDRVRLLGTANTLVRDHPSAPGVVHAEN
+TDVDGILGALAAAGLDRAARGGTVGVLGNGGTATAAVLAAATLGADAVLFGVRDPARAAE
+VTALADALGLRWATLTQADLLRRAPGLRAVVATLPPRAADALAAHVPAGAALPPLLDAAY
+DPWPSVLASAWSREGGPVASGLSMLLHQGIEQVRLFTARPRAAAGMPEPDWAAVTRAAAD
+ALGPAAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001115.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001115.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c9cbb99ae9902d83ba6d5c1ef74a77bc25c885d9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001115.fa
@@ -0,0 +1,25 @@
+>0_1608
+MPGPVSLCAWEAMTGALEARLATAAAAADGAPAPRIVLVGPMGAGKTTVGRALAATTGLP
+FVDADELFVQVHGPIPEFFAARGEAAFREEEARVIAHVLGRPSPCVLSCGGGAVLHPATR
+RALRGPGSDVVHLAVDEAVALRRVGGGAGRPVLAGDPAGTWRRILAEREPFYREVADLVV
+DTTGLTAAEAAWRIVEGVHRPRRSESHP
+>1_1202
+MTDTPGTAPAPGPDPSTRPVPGPVTVCPWEGMTGALEARLTAAATVAAAADEDPAARPAR
+RVVLVGPMGAGKTTVGRALAAVTGLPFVDSDELFTQVHGPIPEFFAEHGEAAFRAEEARV
+IGHVLGRPTPCVLSCGGGAVLHPGTRRALAGPDSDVVYLAVGEEEALRRVGGGAGRPVLA
+GDPAGTWRRILAEREGLYREVADLVLDTTGLTAAEAAWRIVGDAHRPRRSESHP
+>2_1505
+MSAQPAPTDGVPSWEAMVRGLDGRLAETSRDPGPVVVLVGPMGAGKTTVGRALAEATGRV
+FVDSDALFEDAFGSIPAYFTSRGEPEFRRQEERVIAHVLAHPAPCVLACGGGAVLSAATR
+ARLADPRAVVVSLQVAEPEALRRLGGGAGRPVLAGDPAGRWKAVLAERAPLYAEVADLTL
+DGTGHRPGDIASRIVEAIPTLPRRHTRP
+>3_930
+MTDTPGTAPAPGPDPSTRPVPGPVTVCPWEGMIGALEARLTAAATVAAAADEDPAARPAR
+RIVLVGPMGAGKTTVGRALAAVTGLPFVDSDELFTQVHGPIPEFFAEHGEAAFRAEEARV
+IGHVLGRPAPCVLSCGGGAVLHPGTRRALAGPDSDVVYLAVGEEEALRRVGGGAGRPVLA
+GDPAGTWRRILAEREGLYREVADLVLDTTGLTAAEAAWRIVGDAHRPRRSESHP
+>4_1160
+MTDTPGTAPAPGPDPSTRPVPGPVTVCPWEGMIGALEARLTAAATVAAAADEDPAARPAR
+RIVLVGPMGAGKTTVGRALAAVTGLPFVDSDELFTQVHGPIPEFFAEHGEAAFRAEEARV
+IGHVLGRPAPCVLSCGGGAVLHPGTRRALAGPDSDVVYLAVGEEEALRRVGGGAGRPVLA
+GDPAGTWRRILAEREGLYREVADLVLDTTGLTAAEAAWRIVGDAHRPRRSESHP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001116.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001116.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cdf061a0efcc6dc351ffc835da21191f863bfb05
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001116.fa
@@ -0,0 +1,40 @@
+>0_1609
+MTDRHPDPAEPEIPGEPPAAEPAAAGQEDVTVIPVSGGQEAAAHGGYDVVVGRGLLARLP
+EMLGPGVQRVLVIHPRALRATGDVVKNDLEAVGLTALTAEIPDAEEGKHLQVAGFCWQVL
+GQNDFTRSDAVVSVGGGAVSDLAGFVAATWLRGVRVVHMPTTLLGMVDAAVGGKTGINTS
+EGKNLVGAFHPPAGVLADLDTLLTLPANELISGLAEVVKCGFIADPAILDLIEQDPAQSQ
+NPHSARLRELIERSIRVKADIVSRDLRESGEREALNYGHTMGHAIELAERYQWRHGAAVS
+VGLVFAAELARSLGRLDDATADRHWSVLTALGLPVSYRGDRWQTLLEGIRRDKKNRGDQL
+RFVLLDGLAQPSTVDIPDPSLLFAAYQEIAE
+>1_1201
+MTDREPDITEQETPGAAPAAAPAAPEDVTVIPVAGGHEAAVHGGYDVVVGRGLLARLPDL
+LGPTVRRVLVIHPRALRATGDVVKNDLEAVGLTALTAEIPDAEEGKHLQVAGFCWQVLGQ
+NDFTRSDAIVSVGGGAVSDLAGFVAATWLRGIRVVHMPTTLLGMVDAAVGGKTGINTAEG
+KNLVGAFHNPAGVLADLDTLLTLPANELISGLAEVVKCGFIADPAILDLIEEDPAQAQNP
+HSPRLRELIERSIRVKADVVSRDPRESGAREALNYGHTMGHAIELAERYQWRHGAAVSVG
+LVFAAELARSLGRLDDATADRHWSVLTALGLPVSYRGDRWQTLLEGIRRDKKNRGDQLRF
+VLLDGLAQPTTVDIPDASLLFAAYQEIAE
+>2_1506
+MTEHQPDQSDPIAEHSAAAPEQDVTVIPVAGGPENRAGGGYDVVVGRGLLGRLPAVLGPQ
+VRRVLVIHPRALRATGDVVKNDLEAAGLVSLTAEIPDAEEGKHLQVAGFCWQVLGQNDFT
+RSDAIVSVGGGAVSDLAGFVAATWLRGIRVVHMPTTLLGMVDAAVGGKTGINTAEGKNLV
+GAFHPPAGVLADLDTLLTLPSNELVSGLAEVVKCGFIADPRILELIEEAPEQAQNPHSAV
+LRELIERAVRVKAEVVSGDLREAGPREALNYGHTLGHAIEHAERYQWRHGAAVSVGLVFA
+AELARSLGRLDDATADRHWSVLQSLGLPVSYRGDRWQTLLEGIKRDKKNRGDQLRFVLLD
+GLARPTTVDIPDASLLFAAYQEIAE
+>3_929
+MTDREPDITEQETPGAAPAAAPAAPEDVTVIPVAGGHEAAVHGGYDVVVGRGLLARLPDM
+LGPTVRRVLVIHPRALRATGDVVKNDLEAVGLTALTAEIPDAEEGKHLQVAGFCWQVLGQ
+NDFTRSDAIVSVGGGAVSDLAGFVAATWLRGVRVVHMPTTLLGMVDAAVGGKTGINTAEG
+KNLVGAFHNPAGVLADLDTLLTLPANELISGLAEVVKCGFIADPAILDLIEEDPAQAQNP
+HSARLRELIERSIRVKADVVSRDPRESGAREALNYGHTMGHAIELAERYQWRHGAAVSVG
+LVFAAELARSLGRLDDATADRHWSVLTALGLPVSYRGDRWQTLLEGIRRDKKNRGDQLRF
+VLLDGLAQPTTVDIPDASLLFAAYQEIAE
+>4_1159
+MTDREPDITEQETPGAAPAAAPAAPEDVTVIPVAGGHEAAVHGGYDVVVGRGLLARLPDM
+LGPTVRRVLVIHPRALRATGDVVKNDLEAVGLTALTAEIPDAEEGKHLQVAGFCWQVLGQ
+NDFTRSDAIVSVGGGAVSDLAGFVAATWLRGVRVVHMPTTLLGMVDAAVGGKTGINTAEG
+KNLVGAFHNPAGVLADLDTLLTLPANELISGLAEVVKCGFIADPAILDLIEEDPAQAQNP
+HSARLRELIERSIRVKADVVSRDPRESGAREALNYGHTMGHAIELAERYQWRHGAAVSVG
+LVFAAELARSLGRLDDATADRHWSVLTALGLPVSYRGDRWQTLLEGIRRDKKNRGDQLRF
+VLLDGLAQPTTVDIPDASLLFAAYQEIAE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001117.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001117.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a10673794abebdba0ee952fd4d58a50b15e72754
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001117.fa
@@ -0,0 +1,25 @@
+>0_1610
+MATSNDIKNGAVLKLEGQLWNVIEFQHVKPGKGGAFVRTKMKNITTGKVVDKTFNAGAKV
+EFATVDRSDYQYLYQDGSDYVFMDVKDYDQITVSESVVGDAAKYMLENTQVVIALNEGTP
+LYLEMPASVVLEITYTEPGLQGDRSSAGTKPATVETGAEIQVPLFVEQGTRVKVDTRTGD
+YLGRVND
+>1_1200
+MTVRETDREHTHVATSNDIKNGAVLKLEGQLWNVTEFQHVKPGKGGAFVRTKMKNITTGK
+VVDKTFNAGAKVEFATVDRSDYQYLYQDGADYVFMDVKDYDQITVPGAVVGDAAKYMLEN
+TQVVIALHEGTPLYLEMPASVVLEITYTEPGLQGDRSSAGTKPATVETGAEIQVPLFVEQ
+GTRVKVDTRTGDYLGRVND
+>2_1507
+MATTNDIKNGSVLNLEGQLWNVIEFQHVKPGKGGAFVRTKMRNITSGKVVDKTFNAGTKV
+EFATVDRSDYQYLYQDGEDYVFMDVKDYDQITVPAAVVGDAAKYMLENTQVVIAMNEGTP
+LYLEMPASVVLEITYTEPGLQGDRSSAGTKPATVETGAEIQVPLFVEQGTRVKVNTTNGE
+YLGRVND
+>3_928
+MTVRETDREHTHVATSNDIKNGAVLKLEGQLWNVTEFQHVKPGKGGAFVRTKMKNITTGK
+VVDKTFNAGAKVEFATVDRSDYQYLYQDGADYVFMDVKDYDQITVPGAVVGDAAKYMLEN
+TQVVIALHEGTPLYLEMPASVVLEITYTEPGLQGDRSSAGTKPATVETGAEIQVPLFVEQ
+GTRVKVDTRTGDYLGRVND
+>4_1158
+MTVRETDREHTHVATSNDIKNGAVLKLEGQLWNVTEFQHVKPGKGGAFVRTKMKNITTGK
+VVDKTFNAGAKVEFATVDRSDYQYLYQDGADYVFMDVKDYDQITVPGAVVGDAAKYMLEN
+TQVVIALHEGTPLYLEMPASVVLEITYTEPGLQGDRSSAGTKPATVETGAEIQVPLFVEQ
+GTRVKVDTRTGDYLGRVND
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001118.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001118.fa
new file mode 100644
index 0000000000000000000000000000000000000000..54fed8435710f35c761e5cbf0da92db7d9c82c69
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001118.fa
@@ -0,0 +1,20 @@
+>0_1611
+MTEPASAASGAKRGTTARSRSRQRAVEILFEAEQRGATVAEGIRTRRESTDLQVNAYTQR
+LVEGVIADQERLDEALSSYSRGWSLDRMPAVDRAILRVGAWELLFQDDVPDAVAVSEAVA
+LAAQLSTDDSPEFVNGLLGRLQQVKPTLLA
+>1_1199
+MTERASAGSAAKRGTTARSRSRQRAVEILFEAEQRGSSALEGIRTRRESTDLQVNAYTQR
+LVEGVIADQERLDEALSSYSRGWSLDRMPAVDRAILRVGAWELLFQDDVPDAVAISEAVA
+LAAQLSTDDSPEFVNGLLGRLQQVKPTLLA
+>2_1508
+MTDTPSASDAKRGTTARSRSRQRAVEILFEAEQRGTDVLQGIRTRRESTDLQVNAYTQRL
+VEGVVADQERVDEALTSYSRGWSLDRMPAVDRAILRVGAWELLFEDEVPDAVAVSEAVAL
+AAALSTDESPEFVNGLLGRLQQVKPTLLA
+>3_927
+MTERASAGSAAKRGTTARSRSRQRAVEILFEAEQRGSSALEGIRTRRESTDLQVNAYTQR
+LVEGVIADQERLDEALSSYSRGWSLDRMPAVDRAILRVGAWELLFQDDVPDAVAISEAVA
+LAAQLSTDDSPEFVNGLLGRLQQVKPTLLA
+>4_1157
+MTERASAGSAAKRGTTARSRSRQRAVEILFEAEQRGSSALEGIRTRRESTDLQVNAYTQR
+LVEGVIADQERLDEALSSYSRGWSLDRMPAVDRAILRVGAWELLFQDDVPDAVAISEAVA
+LAAQLSTDDSPEFVNGLLGRLQQVKPTLLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001119.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001119.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6f179fea4179b4efa5ff3e708eb7a57730203adb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001119.fa
@@ -0,0 +1,25 @@
+>0_1612
+MGADPAAPRAARTVLSASEIDRALTRIAHEILESNKGAEGLVLMGIPRRGAPLARRLGAV
+LARIEPAFDPEAAVGEVDVTLYRDDLRRSAARTPMPTRLPAVPLDGAVVVLVDDVLFSGR
+TVRAALDAISELGRPAAVRLAVLVDRGHRELPVRADFVGKNLPTSTSERVQVRLVEVDGP
+EGTGEVSEDAVSIADQADRPEQREA
+>1_1198
+MGTDPAAPRAARTVLSTSEIDRALTRIAHEILESNKGAEGLVLMGIPRRGAPLARRLGAL
+LARIEPAFDPTAAVGEVDVTLYRDDLRRGTARTPMPTRLPEVPLDGAVVVLVDDVLFSGR
+TVRAALDAIADLGRPAAVRLAVLVDRGHRELPVRADFVGKNLPTSTAERVQVRLMEVDGP
+EGTGEVTEDAVSIVDRVATREG
+>2_1509
+MGGIPAAPRAARTVLTAPEIDRALTRIAHEILESNKGPEGLVLMGIPRRGVPLARRLAAV
+LHRIDPAFDPVSAVGEVDVTLYRDDLRRGTARTPAPTRLPDHPLDGAVVVLVDDVLFSGR
+TIRAALDALADLGRPAAVRLAVLVDRGHRELPIRADFVGKNLPTSTAERVQVRLTEVDGP
+DGSGEVPEDAVRIVDAPAETPREA
+>3_926
+MGTDPAAPRAARTVLSTSEIDRALTRIAHEILESNKGAEGLVLMGIPRRGAPLARRLGAL
+LARIEPAFDPTAAVGEVDVTLYRDDLRRGTARTPMPTRLPEVPLDGAVVVLVDDVLFSGR
+TVRAALDAIADLGRPAAVRLAVLVDRGHRELPVRADFVGKNLPTSTAERVQVRLMEVDGP
+EGTGEVTEDAVSIVDRVATREG
+>4_1156
+MGTDPAAPRAARTVLSTSEIDRALTRIAHEILESNKGAEGLVLMGIPRRGAPLARRLGAL
+LARIEPAFDPTAAVGEVDVTLYRDDLRRGTARTPMPTRLPEVPLDGAVVVLVDDVLFSGR
+TVRAALDAIADLGRPAAVRLAVLVDRGHRELPVRADFVGKNLPTSTAERVQVRLMEVDGP
+EGTGEVTEDAVSIVDRVATREG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001120.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001120.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4dc5aee7c76d6fcff94cf9d1915b99a28caa4f53
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001120.fa
@@ -0,0 +1,35 @@
+>0_1613
+MRHLLSTAGLSRADALAVLDTAEEMDAVNRREIKKLPALRGRTVVNFFFEDSTRTRISFE
+AAAKRLSADVINFSAKGSSVSKGESLKDTVQTLEAIGADAIVMRHWSSGAARQLADSGWV
+RSAVVNAGDGTHEHPTQALLDAFTLRRRLAAATGEDLVGRDLAGMHVVIVGDILHSRVAR
+SNVWLLATLGAKVTLAAPPTLLPVGVSAWPCEVTYSLDEALDARPDAVMMLRVQAERMGG
+AFFPSAGEYTRTWGLTDERFARLTAGSGALLSEPVVMHPGPMNRGLEISPAAADSPRNTA
+LEQVANGVSVRMAVLHLVLNHDQEVRP
+>1_1197
+MRHLLSTADLSRADALAVLDTAEEMAAVNQREVKKLPALRGRTVVNLFLEDSTRTRISFE
+AAAKRLSADVINFSAKGSSVSKGESLKDTVQTLEAIGADAIVMRHWSSGAARQLADSGWV
+RSAVVNAGDGTHEHPTQALLDAFTLRRRLAAATGEDLVGRDLTGMRVVIVGDILHSRVAR
+SNVWLLSTLGAQVTLAAPPTLLPVGVAAWPCQVTYSLDEALDAGPDAVMMLRVQAERMGG
+AFFPSAGEYTRTWGLTDDRFARLTAGRGALLDEPVVMHPGPMNRGLEISPAAADSPRNTA
+LEQVANGVSVRMAVLHLVLNHDQEVRP
+>2_1510
+MRHLLDTADLTRAEALAVLDTAEEMAAVNAREVKKLPSLRGRTVVNLFLEDSTRTRISFE
+AAAKRLSADVISFSAKGSSVSKGESLKDTVQTLEAIGADAIVMRHWSSGAAAQLAASGWV
+DSAVVNAGDGTHAHPTQALLDAFTLRHHLAAHDGVAPTGTDLTGMHVVIVGDILHSRVAR
+SNVWLLTLLGARVTLAAPPTLLPVGVASWPARVTYSLDEALADAPDAVMMLRVQAERMGG
+AYFPSAGEYTRLWGLNPARFERLTRQSGSRLDTPLVMHPGPMNRGLEICDAAADSPQNTV
+LEQVANGVSVRMAVLHLVLNQDPALAPQEARP
+>3_925
+MRHLLSTADLSRADALAVLDTAEEMAAVNQREVKKLPALRGRTVVNLFLEDSTRTRISFE
+AAAKRLSADVINFSAKGSSVSKGESLKDTVQTLEAIGADAIVMRHWSSGAARQLADSGWV
+RSAVVNAGDGTHEHPTQALLDAFTLRRRLAAATGEDLVGRDLTGMRVVIVGDILHSRVAR
+SNVWLLSTLGAQVTLAAPPTLLPVGVAAWPCQVTYSLDEALDAGPDAVMMLRVQAERMGG
+AFFPSAGEYTRTWGLTDDRFARLTAGRGALLDEPVVMHPGPMNRGLEISPAAADSPRNTA
+LEQVANGVSVRMAVLHLVLNHDQEVRP
+>4_1155
+MRHLLSTADLSRADALAVLDTAEEMAAVNQREVKKLPALRGRTVVNLFLEDSTRTRISFE
+AAAKRLSADVINFSAKGSSVSKGESLKDTVQTLEAIGADAIVMRHWSSGAARQLADSGWV
+RSAVVNAGDGTHEHPTQALLDAFTLRRRLAAATGEDLVGQDLTGMCVVIVGDILHSRVAR
+SNVWLLSTLGAQVTLAAPPTLLPVGVAAWPCQVTYSLDEALDAGPDAVMMLRVQAERMGG
+AFFPSAGEYTRTWGLTDDRFARLTAGRGALLDEPVVMHPGPMNRGLEISPAAADSPRNTA
+LEQVANGVSVRMAVLHLVLNHDQEVRP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001123.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001123.fa
new file mode 100644
index 0000000000000000000000000000000000000000..49577d9adb82fc54807f3d728f8837f135eff1cc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001123.fa
@@ -0,0 +1,100 @@
+>0_1617
+MPKRPDLKSVLVIGSGPIVIGQAAEFDYSGTQAIRVLKEEGVRVVLVNSNPATIMTDPEL
+ADATYVEPITPAVVAKIIEKERPDALLPTLGGQTALNTAIALDKDGVLERFGVELIGANI
+EAIELGENRELFKGVVERAGGESARSHIVHTMEEALAAVEDLKYPVVVRPSFTMGGLGSG
+MAYDEADLHRICGAGLQYSPTSEVLLEESILGWKEYELEMMRDKNDNVVVVCSIENVDPV
+GVHTGDSITVAPAMTLTDREYQKLRDISINVIREVGVDTGGCNIQFAVNPADGRVVVIEM
+NPRVSRSSALASKATGFAIAKIATKLALGYTMDEIPNDITQKTPASFEPVLDYVVVKVPR
+FAFEKFPAADPTLTTTMKSVGEAMAIGRNFTEALQKALRSLEQKGSELAFPQDADPRELL
+RRARTATTDRLAQTQQALYAGATIEEAFEATAIDPWFLDQFVLINEVADQIRDAEVLDES
+LLRHAKRHGFSDAQIGSLRHMGADVVRGVRHALGVRPVYKTVDTCAAEFEAFTPYRYSSY
+DLETEVAPHEGRSVIILGSGPNRIGQGIEFDYSCVHATMALREAGYETVMVNCNPETVST
+DYDISDRLYFEPLTLEDVLEVIAAEEASGGVLGVYVQLGGQTPLKLAQQLADAGVPILGT
+SPEAIDLAEHRGEFARVLDRAGLVAPKNGTAVSFEDAKRVADEIGYPVLVRPSYVLGGRG
+MEIVYSEEALAHYVEHATEITPDQPMLVDRFLEDAIEIDVDALYDGERMYLGGVMEHIEE
+AGIHSGDSACVLPPVTLGPDVLERVHRATEQIAAGVGVRGLINIQFALASDVLYVIEANP
+RASRTVPFVSKATGVQLAKAAAMIGVGKSIADLQAEGVLPTAYDGATLPLGAPVAVKEAV
+LPFTRFRTAEGRVVDSLLGPEMRSTGEVMGIDRHYDTAFAKSQAAAGGPLPTSGRVFVSV
+ANRDKRTLVGQAKRLVDLGFQIVSTGGTAEVLRRNGIPAETVAKIAEAGGEDGAGTVLEQ
+LHAGTVDLVLNTPSGGDARTDGYEIRAAATSLGVPVITTTAEFGACLQAIEAMRAYEWSV
+TSLQEHDARLQQAVEASA
+>1_1194
+MPKRTDLKSVLVIGSGPIVIGQAAEFDYSGTQAIRVLKEEGVRVVLVNSNPATIMTDPEL
+ADATYVEPITPAVVAKIIEKERPDALLPTLGGQTALNTAIALDKDGVLERFGVELIGANI
+EAIELGENRELFKGVVERAGGESARSHIVHTMEEALAAVEDLKYPVVVRPSFTMGGLGSG
+MAYDEADLYRICGAGLQYSPTSEVLLEESILGWKEYELEMMRDKNDNVVVVCSIENVDPV
+GVHTGDSITVAPAMTLTDREYQKLRDISINVIREVGVDTGGCNIQFAVNPVDGRVVVIEM
+NPRVSRSSALASKATGFAIAKIATKLALGYTMDEIPNDITQKTPASFEPVLDYVVVKVPR
+FAFEKFPAADPTLTTTMKSVGEAMAIGRNFTEALQKALRSLEQKGSELAFPQDADPQALL
+AAASTATTDRLSQTQQALYAGATIEEAFEATAIDPWFLDQFVLINEVADEIRDAEVLDEA
+LLRRAKRHGFSDAQIGSLRHMDAAVVRGVRHALGVRPVYKTVDTCAAEFEAFTPYRYSSY
+DLETEVAPHEGESVIILGSGPNRIGQGIEFDYSCVHATMALREAGYETVMVNCNPETVST
+DYDISDRLYFEPLTLEDVLEVIAAEEASGGVRGVFVQLGGQTPLKLAQQLADAGVPILGT
+SPAAIDLAEHRGEFALVLERAGLVAPKNGTAVSFDDAKRVADEIGYPVLVRPSYVLGGRG
+MEIVYSEEALAHYVEHATEITPDQPMLVDRFLEDAIEIDVDALYDGTELYLGGVMEHIEE
+AGIHSGDSACVLPPVTLGPDVLERVHRATERIAAGVGVRGLINIQFALASDVLYVIEANP
+RASRTVPFVSKATGVQLAKAAARIGVGESIADLRAAGMLPTAYDGGTLPIGAPVAVKEAV
+LPFTRFRTAEGRVVDSLLGPEMRSTGEVMGIDKHFDTAFAKSQSAAGGPLPTSGRVFVSV
+ANRDKRTLVGQAKRLVDLGFQVVSTGGTAEVLRRNGIPAEVVAKIADAGHEDGAGTVLEQ
+LHAGTVDLVLNTPSGGDARTDGYEIRAAATSLGVPVITTTAEFGACLQAIEAMRSYEWSV
+TSLQEHDARLQQAVAGPEAAA
+>2_1514
+MPKRTDLKSVLVIGSGPIVIGQAAEFDYSGTQAIRVLKEEGVRVILVNSNPATIMTDPEL
+ADATYVEPITPEVVAKIIEKERPDAVLPTLGGQTALNTAIALDKDGVLEKFGVELIGANI
+AAIELGENRELFKGVVERAGGESARSHIVHTMEEAFAAVEDLKYPVVVRPSFTMGGLGSG
+MAYDEADLRRICGAGLQYSPTSEVLLEESILGWKEYELEMMRDKNDNVVVVCSIENVDPV
+GVHTGDSITVAPAMTLTDREYQKLRDISINVIREVGVDTGGCNIQFAVNPEDGRVVVIEM
+NPRVSRSSALASKATGFAIAKIATKLALGYTMDEIPNDITQKTPASFEPVLDYVVVKVPR
+FAFEKFPAADATLTTTMKSVGEAMAIGRSFSEALQKALRSLEQKGSELSFDRDADPASLL
+ASARTATTQRLAQTQRALYAGATLEEAFEATAIDPWFLDQLMLINEVADEVREAPQLDEA
+VLRRAKRHGFSDAQIGSLRHMDPAVVRGLRHALGVRPVYKTVDTCAAEFEAFTPYRYSSY
+DLESEVDEHAAPSVVILGSGPNRIGQGIEFDYSCVHATLALREAGYETVMVNCNPETVST
+DYDISDRLYFEPLTLEDVLEVIAAEEATGGVAGVFVQLGGQTPLKLAQQLADAGVPILGT
+SPEAIDLAEHRGEFARVLDEAGLIAPKNGTAVSFEDARRVADEIGYPVLVRPSYVLGGRG
+MEIVYTEEALAHYVTNATEITPTQPMLVDRFLEDAIEIDVDALYDGHELYLGGVMEHIEE
+AGIHSGDSACVLPPVTLGPDVLERVRTATEKIAAGVGVRGLINIQFALASDVLYVIEANP
+RASRTVPFVSKATGVQLAKAAAMIGMGRTIAELRAAGTLPTAFDGASLPMGASVAVKEAV
+LPFTRFRTAEGRVVDSLLGPEMRSTGEVMGIDRHFDTAFAKSQAGAGGPLPTEGRVFVSV
+ANRDKRAVVGQAKRLVDLGFEIVSTGGTAEVLRRNGVPAEVVAKIADASDADGAGTVLEQ
+LHEGRVDLVLNTPSGGEARTDGYEIRAAATSLGVPVITTTAEFAACLQAIEAMRTYEWSV
+TSLQEHEERLAQAVAAEASA
+>3_922
+MPKRTDLKSVLVIGSGPIVIGQAAEFDYSGTQAIRVLKEEGVRVVLVNSNPATIMTDPEL
+ADATYVEPITPAVVAKIIEKERPDALLPTLGGQTALNTAIALDKDGVLERFGVELIGANI
+EAIELGENRELFKGVVERAGGESARSHIVHTMEEALAAVEDLKYPVVVRPSFTMGGLGSG
+MAYDEADLYRICGAGLQYSPTSEVLLEESILGWKEYELEMMRDKNDNVVVVCSIENVDPV
+GVHTGDSITVAPAMTLTDREYQKLRDISINVIREVGVDTGGCNIQFAVNPVDGRVVVIEM
+NPRVSRSSALASKATGFAIAKIATKLALGYTMDEIPNDITQKTPASFEPVLDYVVVKVPR
+FAFEKFPAADPTLTTTMKSVGEAMAIGRNFTEALQKALRSLEQKGSELAFPQDADPQALL
+AAASTATTDRLSQTQQALYAGATIEEAFEATAIDPWFLDQFVLINEVADEIRDAEVLDEA
+LLRRAKRHGFSDAQIGSLRHMDAAVVRGVRHALGVRPVYKTVDTCAAEFEAFTPYRYSSY
+DLETEVAPHEGESVIILGSGPNRIGQGIEFDYSCVHATMALREAGYETVMVNCNPETVST
+DYDISDRLYFEPLTLEDVLEVIAAEEASGGVRGVFVQLGGQTPLKLAQQLADAGVPILGT
+SPAAIDLAEHRGEFALVLERAGLVAPKNGTAVSFDDAKRVADEIGYPVLVRPSYVLGGRG
+MEIVYSEEALAHYVAHATEITPDQPMLVDRFLEDAIEIDVDALYDGTELYLGGVMEHIEE
+AGIHSGDSACVLPPVTLGPDVLERVHRATERIAAGVGVRGLINIQFALASDVLYVIEANP
+RASRTVPFVSKATGVQLAKAAARIGVGESIADLRAAGMLPTAYDGGTLPIGAPVAVKEAV
+LPFTRFRTAEGRVVDSLLGPEMRSTGEVMGIDKHFDTAFAKSQSAAGGPLPTSGRVFVSV
+ANRDKRTLVGQAKRLVDLGFQVVSTGGTAEVLRRNGIPAEVVAKIADAGHEDGAGTVLEQ
+LHAGTVDLVLNTPSGGDARTDGYEIRAAATSLGVPVITTTAEFGACLQAIEAMRSYEWSV
+TSLQEHDARLQQAVAGPEAAA
+>4_1152
+MPKRTDLKSVLVIGSGPIVIGQAAEFDYSGTQAIRVLKEEGVRVVLVNSNPATIMTDPEL
+ADATYVEPITPAVVAKIIEKERPDALLPTLGGQTALNTAIALDKDGVLERFGVELIGANI
+EAIELGENRELFKGVVERAGGESARSHIVHTMEEALAAVEDLKYPVVVRPSFTMGGLGSG
+MAYDEADLYRICGAGLQYSPTSEVLLEESILGWKEYELEMMRDKNDNVVVVCSIENVDPV
+GVHTGDSITVAPAMTLTDREYQKLRDISINVIREVGVDTGGCNIQFAVNPVDGRVVVIEM
+NPRVSRSSALASKATGFAIAKIATKLALGYTMDEIPNDITQKTPASFEPVLDYVVVKVPR
+FAFEKFPAADPTLTTTMKSVGEAMAIGRNFTEALQKALRSLEQKGSELAFPQDADPQALL
+AAASTATTDRLSQTQQALYAGATIEEAFEATAIDPWFLDQFVLINEVADEIRDAEVLDEA
+LLRRAKRHGFSDAQIGSLRHMDAAVVRGVRHALGVRPVYKTVDTCAAEFEAFTPYRYSSY
+DLETEVAPHEGESVIILGSGPNRIGQGIEFDYSCVHATMALREAGYETVMVNCNPETVST
+DYDISDRLYFEPLTLEDVLEVIAAEEASGGVRGVFVQLGGQTPLKLAQQLADAGVPILGT
+SPAAIDLAEHRGEFALVLERAGLVAPKNGTAVSFDDAKRVADEIGYPVLVRPSYVLGGRG
+MEIVYSEEALAHYVEHATEITPDQPMLVDRFLEDAIEIDVDALYDGTELYLGGVMEHIEE
+AGIHSGDSACVLPPVTLGPDVLERVHRATERIAAGVGVRGLINIQFALASDVLYVIEANP
+RASRTVPFVSKATGVQLAKAAARIGVGESIADLRAAGMLPTAYDGGTLPIGAPVAVKEAV
+LPFTRFRTAEGRVVDSLLGPEMRSTGEVMGIDKHFDTAFAKSQSAAGGPLPTSGRVFVSV
+ANRDKRTLVGQAKRLVDLGFQVVSTGGTAEVLRRNGIPAEVVAKIADAGHEDGAGTVLEQ
+LHAGTVDLVLNTPSGGDARTDGYEIRAAATSLGVPVITTTAEFGACLQAIEAMRSYEWSV
+TSLQEHDARLQQAVAGPEAAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001124.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001124.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ff8d0b46bff6a7e147b99875d11f8b809b005985
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001124.fa
@@ -0,0 +1,31 @@
+>0_1618
+MAQAGPLCLGVDPHPSLLRQWGLPDTPAGLEAFSLTGLEAAVGPDGPRVAAIKPQVALYE
+RHGSAGLAALERLLAEARDAGVLTIADAKRGDIGSTMDGYAAAWTSDASPLAADAVTLSP
+YLGFGTLVPTIEAAHAAGRGVFVLALTSNPEGREVQHVGRDAGEGAVARRIAAAAADLNA
+ALRAEDEWGPVGLVLGATVAEDAERLGLDLPGLAGPLLAPGFGAQGATAAGMREGFGRAW
+PQVLATSSRGILAGGPTVAALVERIERDRADLG
+>1_1193
+MTTTATGGAGPRAPFGRRLAHAMETAGPLCLGVDPHPGLLRQWGLSDTPAGLEAFSLTAL
+EAAVGPEGPRVAAIKPQVALYERHGSAGLAALERLLAAARDAGVLTIADAKRGDIGSTMD
+GYAAAWIADASPLAADAVTLSPYLGFGTLVPTIRAAHEVGRGVFVLALTSNPEGREVQHV
+GEGSAEGSVARRIAAAAAAENAALRGDDAWGPVGLVLGATVAAEADRLGLDLPALGGPLL
+APGFGAQGATARGMRADFGTAWPQVLATSSRGILSAGPSVASLVDTIEENRAALR
+>2_1515
+MSVPAASMTREPFGRRLAAAMAAAGPLCLGIDPHPSLLQAWGLPDTAAGLESFGLTALEA
+AAGDGAARVAAVKPQVALFERHGSAGLAVLERLLAEARDAGVLTIADAKRGDIGSTMDGY
+AAAWLDDASPLAADAVTLSPYLGYGTLTASIERAAAAGRGVFVLALTSNPEGASVQHVGA
+SEGQGAVAARIVTSAAADDARLAGLDGWGPVGLVVGATVAGHARELGIDLAALRGPLLAP
+GFGAQGATGAGMREAFGAAWPQVLATSSRGILAAGPTVTSLTRAIDAARADLGVEGPDPR
+HAAGRDA
+>3_921
+MTTTATGGAGPRAPFGRRLAQAMETAGPLCLGVDPHPGLLRQWGLSDTPAGLEAFSLTAL
+EAAVGPEGPRVAAIKPQVALYERHGSAGLAALERLLAAARDAGVLTIADAKRGDIGSTMD
+GYAAAWIADASPLAADAVTLSPYLGFGTLVPTIRAAHEAGRGVFVLALTSNPEGREVQHV
+GEGSAEGSVARRIAAAAAAENAALRGDDAWGPVGLVLGATVAAEADRLGLDLPALGGPLL
+APGFGAQGATARGMRADFGTAWPQVLATSSRGILSAGPSVASLVDTIEENRAALR
+>4_1151
+MTTTATGGAGPRAPFGRRLAHAMETAGPLCLGVDPHPGLLRQWGLSDTPAGLEAFSLTAL
+EAAVGPEGPRVAAIKPQVALYERHGSAGLAALERLLAAARDAGVLTIADAKRGDIGSTMD
+GYAAAWIADASPLAADAVTLSPYLGFGTLVPTIRAAHEAGRGVFVLALTSNPEGREVQHV
+GEGSAEGSVARRIAAAAAAENAALRGDDAWGPVGLVLGATVAAEADRLGLDLPALGGPLL
+APGFGAQGATARGMRADFGTAWPQVLATSSRGILSAGPSVASLVDTIEENRAALR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001126.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001126.fa
new file mode 100644
index 0000000000000000000000000000000000000000..356d09c7c261e5637591943e0815df2e459f2983
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001126.fa
@@ -0,0 +1,25 @@
+>0_1620
+MTDAFDHGPAPAVPVARTAAQERRPGPGVTVLAGPTAVGKGTVSAYVREHYPQAWLSVSA
+TTRPARPGEEDGVHYYFTTPEEFDSLVAADEMLEWAVVHGVHRYGTRRDRVMEAVAQGRH
+VLLEIDLQGARQVRESLPEATFVFLAPPSWEELVSRLVGRGTEGPEEQRRRLDTARLELA
+AEPEFDAVVVNDRVERAAEELVRLMGLDPEHSSPEA
+>1_1191
+MTDTFDPGPAPAVPVARTVVQERPPGPGVTVLAGPTAVGKGTVSAYVREHYPEAWLSVSA
+TTRPARPGEEDGVHYYFTTPEEFDSLVEADEMLEWAVVHGVHRYGTRRDRVMEAVAQGRH
+VLLEIDLQGARQVRRALPEATFVFLAPPSWEELVSRLLGRGTESPEEQRRRLETARLELA
+AEPEFDAVVVNDRVERAAEELVRLMGLDPERRPTEA
+>2_1517
+MSDLSDLGPAPSVPGERAPSRPPAPGAGVTVLAGPTAVGKGTVSAYIREHYPQAWLSVSA
+TTRAPRPGEEDGVHYFFTTPEEFDELVAGDQMLEWAVVHGRNRYGTRRDRVAEAVAAGRH
+VLLEIDLQGARQVRRTLPEATFVFLAPPSWDELVSRLVGRGTEGPEEQRRRLETARLELA
+AEPEFDAVVVNDAVERAAAELVKLMGIDPHDAPASA
+>3_919
+MTDTFDPGPAPAVPVARTAVQERPPGPGVTVLAGPTAVGKGTVSAYVREHYPEAWLSVSA
+TTRPARPGEEDGVHYYFTTPEEFDSLVEADEMLEWAVVHGVHRYGTRRDRVMEAVAQGRH
+VLLEIDLQGARQVRRALPEATFVFLAPPSWEELVSRLLGRGTESPEEQRRRLETARLELA
+AEPEFDAVVVNDRVERAAEELVRLMGLDPERRPTEA
+>4_1149
+MTDTFDPGPAPAVPVARTAVQERPPGPGVTVLAGPTAVGKGTVSAYVREHYPEAWLSVSA
+TTRPARPGEEDGVHYYFTTPEEFDSLVEADEMLEWAVVHGVHRYGTRRDRVMEAVAQGRH
+VLLEIDLQGARQVRRALPEATFVFLAPPSWEELVSRLLGRGTESPEEQRRRLETARLELA
+AEPEFDAVVVNDRVERAAEELVRLMGLDPERRPTEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001128.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001128.fa
new file mode 100644
index 0000000000000000000000000000000000000000..eff26f3f1732382ffcf6f5142eb95db4d31e9c2b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001128.fa
@@ -0,0 +1,45 @@
+>0_1622
+MEIVLGVGGGIAAYKAALLLRLMTEAGHGVTVVPTANALEFVGTATWEALSGRPVRTGTF
+EAVDEVNHVRLGRQADLVVVAPATADLLARTAAGMAPDLLGNVLLTATCPVVLAPAMHTE
+MWHHPATVANVALLRERGVTVVEPAVGRLTGADSGARRLPEPDEIWELAQAAAADPAARR
+PRATTSRPGPAAAGAAPGPLAGRTVVITAGGTREALDPVRYLGNRSSGKQGVALARAALA
+AGARVRFIAGSMSVPVPEGVERAVHVESTAELLTAVLEQAADADVLVMAAAVADFRPAEA
+SESKMKKGDDGSSPVIVLERTEDVLATAVRTRAAGGPMAPLIVGFAAETGDAESSVLEYG
+RAKLARKGCEMLVVNEVGRDKVFGRDETAVTILFADGSPAVEAAGSKDEAAAAVVGAVVD
+RLAASAPGSASAR
+>1_1189
+MEIVLGVGGGIAAYKAALLLRLMTEAGHGVTVVPTANALEFVGAATWEALSGRPVRTDTF
+EAVDEVNHVRLGRHADLVVVAPATADLLARTAAGMAPDLLGNVLLTATCPVVLAPAMHTE
+MWHHPATAANVALLRERGVTVVDPAVGRLTGADSGAGRLPEPAEIWERAQAAAAAGAPRR
+PRASGSGTEPTPGPLAGRTVVITAGGTREALDPVRYLGNRSSGKQGAALARAALDAGAIV
+RFIAGSMSVPAPEGVERVVQVESTQDLLEAVLAEAADADVLVMAAAVADFRPAEVSDAKM
+KKGDDGGAPVIVLERTPDVLATAVRTRSEGGPMAPLIVGFAAETGDPTSSVLEYGRAKLA
+RKGCEMLVVNEVGTDKVFGRDETAVTILFADGRPAVEAAGSKDQAAAAVVQAIVDDLAGR
+DPAGASGR
+>2_1519
+MEVVLGVGGGIAAYKAALLLRLMKEAGHGVTVVPTDNALRFVGAPTWEALSGRPVRTDTF
+TDVPEVSHVRLGREADLVVVAPATADLLARTAAGMAPDLLGNVLLTATCPVVLAPAMHTE
+MWRHPATVANVALLRERGVHVIEPDSGRLTGADSGPGRLPEPARIWAEAQDAAARAGGRA
+GREAAVTAAEPGAASPLAGRTVVISAGGTREALDPVRFLGNRSSGKQGTALAEAVLAAGA
+RVRFIAGPMSVAPPAGTEVTAVESTQELLEAVLSEAADADVLIMAAAVADFRPAQVATSK
+IKKTDDGGAPTIVLERTPDVLATAVQTRDAGGPMAPVIVGFAAETGDEHTTPLEYGRAKL
+ARKGCDLLVVNEVGDGKVFGQDATEVTVLSADGAEPVTRTGSKAEAAAAVVEALERVLAS
+REAGGAPGR
+>3_917
+MEIVLGVGGGIAAYKAALLLRLMTEAGHGVTVVPTANALEFVGAATWEALSGRPVRTDTF
+EAVDEVNHVRLGRRADLVVVAPATADLLARTAAGMAPDLLGNVLLTATCPVVLAPAMHTE
+MWHHPATVANVALLRERGVTVVDPAVGRLTGADSGAGRLPEPAEIWERAQAAAAAGAPRR
+PRASGSDAEPTPGPLAGRTVVITAGGTREALDPVRYLGNRSSGKQGAALARAALDAGATV
+RFVAGSMSVPTPEGVERVVPVESTQDLLDAVQAEAADADVLVMAAAVADFRPAEVSDAKM
+KKGDDGGAPVIVLERTPDVLATAVRTRSEGGPMAPLIVGFAAETGDATSSVLEYGRAKLA
+RKGCEMLVVNEVGTDKVFGRDETAVTILFADGRPAVEAAGSKDEAAAAVVQAIVDDLAGR
+DPVGASGR
+>4_1147
+MEIVLGVGGGIAAYKAALLLRLMTEAGHGVTVVPTANALEFVGAATWEALSGRPVRTDTF
+EAVDEVNHVRLGRRADLVVVAPATADLLARTAAGMAPDLLGNVLLTATCPVVLAPAMHTE
+MWHHPATVANVALLRERGVTVVDPAVGRLTGADSGAGRLPEPAEIWERAQAAAAAGAPRR
+PRASGSDAEPTPGPLAGRTVVITAGGTREALDPVRYLGNRSSGKQGAALARAALDAGATV
+RFVAGSMSVPTPEGVERVVPVESTQDLLDAVQAEAADADVLVMAAAVADFRPAEVSDAKM
+KKGDDGGAPVIVLERTPDVLATAVRTRSEGGPMAPLIVGFAAETGDATSSVLEYGRAKLA
+RKGCEMLVVNEVGTDKVFGRDETAVTILFADGRPAVEAAGSKDEAAAAVVRAIVDDLAGR
+DPVGASGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001131.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001131.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7ba41d37cf968d3becc9707ea8bb3938261fbd71
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001131.fa
@@ -0,0 +1,34 @@
+>0_1625
+MHGFRGDHHGLALLADALPERAITSIELPGFGDSEPFPDAEHTVAHHADAVAAVLAAMPP
+SQRPVLVAHSYGTVVGAELVARDPGRWDRLALLNPIAEPALDASASWTSRGLAALARGYY
+ELAARLPERAGRLVLGAAPVVWVTTLAMSRTPDRRVLAYTHDQHRRYFSRFASARMLSES
+YRASSTGTVADAADRLRLPVLLVAGREDPLGSVPAQEALAAAIEAGGGRAELHVLDGVGH
+LLHYERPGECAALLRAWAARGR
+>1_1186
+MPVPTPPAAPGPPVRLRDLLRPPAAPADPRVLTGHVARTPRRRTLAVPDPVRRTPSSVAV
+WEYAPVPEAAPGSRGAPEGDPAAAPLVFVHGFRGDHHGLALLADALPEHPIHSIELPGFG
+DSEPFPHAEHTVAHHADAVAAGVAALGLPAAPVLVAHSYGTTVAAELAVRDPSRWARLVL
+LNPIAEPALQASASVTSRVLAAVAEGYYEVAARLPERPARLLLGAPPVVWVTTLATTRTR
+DRDVLAYTHDQHRRHFSGFASARMLSEAYRASSTGSVADVAARLTLPVLLVAGREDPLGS
+VPAQKALAAAIDAGGGTAELHVLDGVGHLLHYERPAACAALIRDWLRRAGR
+>2_1522
+MPAPHDADPASPAGPRPIRPWHRLRIPAPTTPPRALTGHDVRVPRRRDVAVPDPISGAPL
+SVAVWQHDAAPSSGASVAGAARPHLVFVHGFRGDHHGLQLLADCLPEFGVSSVELPGFGA
+SDPFPDAEHTVAHHADALAAAVAALGLDAPPVLVAHSYGTVVAAHLVQRDSGAWPALALL
+NPIAEPALDASGSRADRLLAGVAEAYYEAAARLPERVSRLLLGAPPVVWVTTQAMSRTRD
+RDVLAYTHDQHRRFFSGFASARMLSESYRASSTGTVAQAADRLDLPVLLVAGREDPLGSV
+AAQEALAARIAAAGGVPELHVLDGVGHLLHYERPAACARLLREWLAAGA
+>3_914
+MPVPTPPAPPGPPVRLRDLLRPPAAPADPRVLTGHPARTPRRRTLAVPDPVRRTPSSVAV
+WEYAPVPVAAPGSPGALEGDAAAAPLVFVHGFRGDHHGLALLADALPEHPIHSIELPGFG
+ASEPFPRAEHTVAHHADAVAAAVVALGLPAAPVLVAHSYGTTVAAELVAREPSRWGRLVL
+LNPIAEPALQASASATSRVLAAVAEGYYEVAARLPERSARLLLGAPPVVWATTLAMTRTR
+DRDVLAYTHDQHRRHFSGFASARMLSEAYRASSTGSVADVAARLTLPVLLVAGREDPLGS
+VPAQEALAAAIDAAGGTAELHVLDGVGHLLHYERPAACAALIRDWFRRAGR
+>4_1144
+MPAPTPPAAPGPPVRLRDLLRPPAAPADPRVLTDHPARTPRRRTLAVPDPVSGTPSSVAV
+WEYAPVPEAAPGSPSGLKGDTAAAPLVFVHGFRGDHHGLALLADALPEHPIHSIELPGFG
+ASEPFPHAEHTVAHHADAVAAVVAALGLPAAPVLVAHSYGTTVAAELVARDPSRWGRLAL
+LNPIAEPALQASASVTSRVLAAVAEGYYEVAARLPERSARLLLGAPPVVWVTTLAMTRTR
+DRDVLAYTHDQHRRHFSGFASARMLSEAYRASSTGSVADVAARLTLPVLLVAGREDPLGS
+VPAQEALAAAIDAGGGTAELHVLDGVGHLLHYERPAACAALIRDWLRRAGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001133.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001133.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7eb960824d113856b047a79576702ee90a30050f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001133.fa
@@ -0,0 +1,75 @@
+>0_1627
+MFPYPSGDLHMGHAEAFAMGDVVARHWMQRGYDVLHPIGWDSFGLPAENAAIKRDAHPAE
+WTYANIETQKRSFQRYGIAVDWSRELHTSDPEYYRWTQWLFQQLYRKGLAYRKDSPVNWC
+PQDQTVLANEQVVDGRCERCGTEVTKRTLNQWYFRITEYADALLDDMDQLTGHWPERVLA
+MQRNWIGRSEGAHVDFQIEDGPQITVFTTRPDTLHGATFMVVAADAPLAAELADESVRAE
+LEAYREELKKVSDIDRQATDRPKTGVFLGRHAINPLNGERLPVWASDYVLADYGTGAIMA
+VPAHDQRDLDFARAMGLPVRAVLDTGEENPAVSGVATTGDGTLVNSGELDGLDKTAAIAR
+AIEIVEGRGTGRGTTTYRLRDWLLSRQRFWGTPIPVVHCEACGEVLVPEDQLPVTLPTDL
+NGEQLAPKGQSPLAAATSWVEVACPDCGGPARRDTDTMDTFVDSSWYTLRYASPNDDTQV
+FDPEAVRRWLPVDQYVGGVEHAILHLLYARFFTKALHDLGLVPFTEPFRALLNQGQVLNG
+GRAMSKSLGNGVDLGAQLDEFGVDAVRLTMVFASPPEDDVDWADVAPGAAGKFLARAWRL
+ARDVREAGTPADADPATGSVALRRVTHRSVHEAGQLLDDGKFNVVIAKTMELVNAARKEI
+DGGAGAADPAVREAAEAVAVLLSLVAPYTAEDMWVMLGHEPSVVRAGWPAVDESLLVEDT
+VTAVVQVKGKVRDTLEVPADITAEDLEARARASQKVRTFIGDAEIVKVIVREPKLVNLVI
+R
+>1_1184
+MSQTPDSAVPATPSIPADAEYSFRDVEARWAGYWEQAGTFAPREDGSETRTVVDMFPYPS
+GDLHMGHAEAFAMGDVVARHWMQRGFDVLHPIGWDSFGLPAENAAIKRDAHPAEWTYANI
+ETQKRSFQRYGIAVDWSRELHTSDPEYYRWTQWLFQQLYRRGLAYRKDSPVNWCPQDQTV
+LANEQVVDGRCERCGTEVTKRTLNQWYFRITEYADALLDDMDQLTGHWPERVLAMQRNWI
+GRSEGAHVDFQVEDGPVVTVFTTRPDTLHGATFMVVAADAPLAAELAGDDVRAELEAYRE
+DLKKVSDIDRQATDRPKSGVFLGRHAVNPLTGERLPIWASDYVLADYGTGAIMAVPAHDQ
+RDLDFARAMGLPVRTVLDTGEEDPAVSGVATTGEGILVNSGELDGLDKTAAIARAIEIVQ
+ERGTGRGTTTYRLRDWLLSRQRFWGTPIPVVHCPDCGEVLVPEDQLPVTLPTDLKGEQLA
+PKGQSPLAAATSWVEVDCPQCGGPARRDTDTMDTFVDSSWYMLRYASPNDDARVFDPEAL
+RRWLPVDQYVGGVEHAILHLLYARFFTKALHDLGLVPFTEPFRALLNQGQVLNDGKAMSK
+SLGNGVDLGDQLDQFGVDAVRLTMVFASPPEDDVDWADVAPGAAGKFLARAWRLARDVRA
+TGTPAGTDPADGAVALRRVTHRTVHEAQQLLDDGKFNVVVAKTMELVNAARKEIDAGAGA
+ADPAVREAAEAVAVLLSLVAPYTAEDMWVLLGHEPSVIRAGWPAVDEALLVEDTVTAVVQ
+VKGKVRDTLEVPADITAEDLEARARASQKVRNFIGDAQIVKVIVREPKLVNLVIR
+>2_1524
+MSQTPESAAPATPQVPEDAEYAFSEVEARWAGYWEQAGTFTPRGDGSATRTVVDMFPYPS
+GDLHMGHAEAFAMGDVLARYWLQRGYDVLHPIGWDSFGLPAENAAIKRNAHPAEWTYANI
+ETQKRSFQRYGIAVDWSRELHTSDPEYYRWTQWLFQQLYRKGLAYRKDSPVNWCPQDQTV
+LANEQVVDGKCERCGAEVTKRELNQWYFRITEYADALLDDMDQLTGHWPERVLAMQRNWI
+GRSEGAHVDFQVEDGPAVTVFTTRPDTLHGATFMVVAADAPLALELVDDEHRAALEAYRE
+ELKKASDIERQATDRPKTGVFLGRHAVNPLTGERLPMWASDYVLADYGTGAIMAVPAHDQ
+RDLDFARAMDLPVRTVVDTGEEDPAVSGVATTGEGTLVNSGELDGLSKADGIARAIEIVQ
+ERGTGRGTTTYRLRDWLLSRQRFWGTPIPVVHCPEHGEVLVPEDQLPVLLPTDLKGGQLA
+PKGQSPLAAAEEWVNVPCPECGAPARRDSDTMDTFVDSSWYFLRYASPWDEQQVFDPELV
+KTWLPVDQYVGGVEHAILHLLYARFFTKALHDLGLVPFTEPFRALLNQGQVLNGGKAMSK
+SLGNGVDLGQQLDEFGVDAVRTTMVFASPPEDDVDWADVAPAAAGKFLARAWRLARDVRA
+AGTPAGDPAQGSAALRRVTHRTVHEAAALVEDHKFNVVVAKTMELVNATRKEIDGGAGAA
+DPAVREAAEAVAILLSLVAPYVAEDMWAMLGHEPSVVRAGWPAVDESLLVEDTVTAVVQV
+KGKVRDQLQVPADVSAADLEAAARASAKVRAFIGDAEIVKVIVREPKLVNLVIR
+>3_912
+MSQTPDSAVPATPSIPADAEYSFRDVEARWAGYWEQAGTFAPREDGSETRTVVDMFPYPS
+GDLHMGHAEAFAMGDVVARHWMQRGFDVLHPIGWDSFGLPAENAAIKRDAHPAEWTYANI
+ETQKRSFQRYGIAVDWSRELHTSDPEYYRWTQWLFQQLYRRGLAYRKDSPVNWCPQDQTV
+LANEQVVDGRCERCGTEVTKRTLNQWYFRITEYADALLDDMDQLTGHWPERVLAMQRNWI
+GRSEGAHVDFQVEDGPVVTVFTTRPDTLHGATFMVVAADAPLAAELAGDDVRAELEAYRE
+DLKKVSDIDRQATDRPKSGVFLGRHAVNPLTGERLPIWASDYVLADYGTGAIMAVPAHDQ
+RDLDFARAMGLPVRTVLDTGEEDPAVSGVATTGEGILVNSGELDGLDKTAAIARAIEIVQ
+ERGTGRGTTTYRLRDWLLSRQRFWGTPIPVVHCPDCGEVLVPEDQLPVTLPTDLKGEQLA
+PKGQSPLAAATSWVEVDCPQCGGPARRDTDTMDTFVDSSWYMLRYASPNDDARVFDPDAL
+RRWLPVDQYVGGVEHAILHLLYARFFTKALHDLGLVPFTEPFRALLNQGQVLNGGKAMSK
+SLGNGVDLGDQLDEFGVDAVRLTMVFASPPEDDVDWADVAPGAAGKFLARAWRLARDVRA
+TGAPAGTDPAGGAVTLRRVTHRTVHEAQQLLDDGKFNVVVAKTMELVNAARKEIDAGAGA
+ADPAVREAAEAVAVLLSLVAPYTAEDMWVLLGHEPSVVRAGWPAVDEALLVEDTVTAVVQ
+VKGKVRDTLEVPADITAEDLEARARASQKVRNFIGDAEIVKVIVREPKLVNLVIR
+>4_1142
+MSQTPDSAVPATPSIPADAEYSFRDVEARWAGYWEQAGTFAPREDGSETRTVVDMFPYPS
+GDLHMGHAEAFAMGDVVARHWMQRGFDVLHPIGWDSFGLPAENAAIKRDAHPAEWTYANI
+ETQKRSFQRYGIAVDWSRELHTSDPEYYRWTQWLFQQLYRRGLAYRKDSPVNWCPQDQTV
+LANEQVVDGRCERCGTEVTKRTLNQWYFRITEYADALLDDMDQLTGHWPERVLAMQRNWI
+GRSEGAHVDFQVEDGPVVTVFTTRPDTLHGATFMVVAADAPLAAELAGDDVRAELEAYRE
+DLKKVSDIDRQATDRPKSGVFLGRHAVNPLTGERLPIWASDYVLADYGTGAIMAVPAHDQ
+RDLDFARAMGLPVRTVLDTGEEDPAVSGVATTGEGILVNSGELDGLDKTAAIARAIEIVQ
+ERGTGRGTTTYRLRDWLLSRQRFWGTPIPVVHCPDCGEVLVPEDQLPVTLPTDLKGEQLA
+PKGQSPLAAATSWVEVDCPQCGGPARRDTDTMDTFVDSSWYMLRYASPNDDARVFDPDAL
+RRWLPVDQYVGGVEHAILHLLYARFFTKALHDLGLVPFTEPFRALLNQGQVLNGGKAMSK
+SLGNGVDLGDQLDEFGVDAVRLTMVFASPPEDDVDWADVAPGAAGKFLARAWRLARDVRA
+TGAPAGTDPAGGAVTLRRVTHRTVHEAQQLLDDGKFNVVVAKTMELVNAARKEIDAGAGA
+ADPAVREAAEAVAVLLSLVAPYTAEDMWVLLGHEPSVVRAGWPAVDEALLVEDTVTAVVQ
+VKGKVRDTLEVPADITAEDLEARARASQKVRNFIGDAEIVKVIVREPKLVNLVIR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001136.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001136.fa
new file mode 100644
index 0000000000000000000000000000000000000000..12610fc3af09bc6805dddbba0fe03c2a88b4df41
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001136.fa
@@ -0,0 +1,79 @@
+>0_1630
+MVSAPAGSRPPEAPGARTDPAARRGDVPGPLDARWVPALLACLTLGIVSDGWEAATRTTV
+ALACLGAAAAAVLLAARAPTPAWIRGTGTAVALAGVAVALMLQHSAVPAAALERTGWADV
+VREQAAVRVELAVTGAAVETAGTFGPRWSAPVRVRAFGHPARAPEAAVAARLSGPGTVPS
+ALGAAPDSEPAPGGRVVGPPAATVLCVVVTPDAGDGTVFLTAAAAPTPGPCPAADAAHGA
+ASVEDEPPPRREALRAAFRAAAAGTAGTAPELIPGLVLGDRSAQGRPLDAAMKASGLSHL
+SAVSGANVALLLGFTAVALRSLRVHRAVVIAAGLGLLAVFVVVVGPEPSVLRAAVMGALG
+AVAVFLGRGRQAFALLAVGGTALLVAVPSLSVEPAFHLSLAATAGIVLAGSWGDRTLHGP
+LRRVLPDAAARWLSASLAVTLAALLACQPVLLAMTGELSAYAVLANLVAAPAVAPVTVLG
+TLAAALVLPAPAVAAALVWLVQWPSAWIGVVAHAAAGLPGALRPWPSGALGVGLGALLTA
+ATLAGFAAVLVLERRRHARVRRVGEGAPLPPERTPALVLLAAVLVAAAVGGVGAVLVPRP
+AGAAPPDWAVAFCDVGQGDMAVFRSGPRAGVVVDVGREPEAARRCLEDLGVDRVEAVLLT
+HLHADHAGGLAGVADRAVPGAVRYATRDAAGVGRSGATAGEAPGVAPPAGGARLVTGERG
+AAGQARWEVLLADARAAEENDASAQLLVTVDAPAGPVTTLVTGDMEEEASGVWAAGRRSD
+AAGPPSVDVLKVAHHGARNGGTAVPRAVRARLHVVSVGAENTYGHPHPATLDALHRLGPV
+ARTDLHGTVALVAEGPDGAAGAGEIGVYTVRPPSAVRTAP
+>1_1181
+MNPAPGPPNDPVDRRARHREVPGPLEARWVPALLGCLTLGILGVGWDAPARSAAALTGLA
+VAAAAILGAARSTGRIRGVATATALAGVAAALMLQHSAGPAAAASGSGWTGAVHAGSPLR
+LELTLDGPATRSEATFGPRWSVPVRVETFGHPPRAPEAAVTARLTGGGAPPATIVAPEGG
+TWAPDGGPGSRVCVVARPSRSGSTVFLAAASAPQPGPCPGGTQTAGGATGGDPGPPRREA
+LRAAFRQSAEGTVGAAPELIPGLVLGDRSAQGAALDDAMKASGLSHLSAVSGANVAMILG
+AVAITLRSARVHRAVVLSAGLAVLGVFVVVVGPEPSVLRAAVMGALGALAVFFGRARQAF
+GLLTVGGTALLVAVPALAVEPAFHLSLAATAGIVLAGAPLDRALHAGLGRMLPDVVARWL
+SASLAVTVAAHLACQPIILAMTGEVSAYAVPANLLAAPAVPPVTVLGTLAAALALPAPGI
+AAALVAVIQWPAAWIGWVAHTSASLPGALRPWPAGALGAGLGVLLVAATLLGFAAVLLLE
+RRRTAPVRRVGRSAPRTRERLPALVVLAAALAAATTGAVGAVLVPRSSGSAPPDWAVAFC
+DVGQGDMAVFRSGPRAGVVVDVGPEPGLARRCLDDLDVDRVDAVLLTHLHADHAGGLAGV
+VDRASRGAVHYATRDAPAQGREGRGGEADGVDPLADAARLRTGATGTAGPVRWHVLLADA
+RAPEENDASAQVLVTVESGAGPVTTLVTGDMEEDASAAWVAGRRSDAAAPPRVDVLKVAH
+HGARNGGTAVPRAAGARLHVVSVGADNPYGHPHRATVDALGRLGPVARTDLHGTLALTAA
+DGPDPDGAPEIAVHTVRPPSSVRTGP
+>2_1527
+MSLGCAALAAVTLTLRLRIRRTGSSRVRTGAATAVVLAGLCGAVLVQHIAVERSGREQVG
+WIETVDTGGPVRLEVTAQGPATAGDSRFGPSWTRPVTVQRFGHPLRPLTPPAEATLTGTG
+SLDAAANGAEVLCVVAEPRPADGALFLAARAAPESDGCGEGSTAASSGPTGRDVLRARFR
+EAAADGVGLAPELVPGLVLGDRTAQSEQTDQAMKDAGLSHLSAVSGANCALLLGTVALVL
+RSLRCPRGVVLGAGLAVLGVFVLVVGPEPSVLRAAVMGALGALAVFLGRGRQAFGLLCAG
+GTLLLVSVPDLAGEIAFHLSLAATAGIVLVAAPVDRWLHGRLGRVLPDLAARGLSSSLAV
+TLAAHLACQPILLVMTGTVSLWAVPANLMAAPAVAPVTVLGTLAAALVVPAPWAAAPLLW
+TVQWPAAWIGVTATAASAAPGAVRPWPEGALGVALGALLTAATLAGFHAVLVLERRPTAP
+VRRVGRSARDARVRVPAGVVLAAVLAASATGAAAAVLVPRPPGTVPEGWAVAVCDVGQGD
+MTVFRSGPGSAVVADAGPDPAAASRCLDDLRIERVDALLLTHLHADHAAGAPGLSGPRAA
+AAVRHGAWSGSGGGGGEEPGLDAPAGSAPLTTGDEGRAGDVAWRVLLADPRAAEQNDSSA
+QLLVTVTTPAGPVTTLVTGDMEQEASAAWAAGTRSDAAPPPRVDLLKVAHHGARNGGLDV
+PRRVRARLQAISVGADNTYGHPAAATVAGLEELGPVLRTDRHGTVALVPGPDARLTPYTV
+RPPT
+>3_909
+MVSPAPGPPSDPVDRRARHREVPGPLEARWVPALLVCLTLGILGVAWDAPARSAAALTGL
+AVAATTVLGAARSTGRIRGVATATTLAGVAAALMLQHSAGPAAAASASGWTGAVHAGSPL
+RLELTLDGPATRSEATFGPRWSVPVRVETFGHPPRAPEAAVTARLTGGGAPPATIAAPLD
+GTAAPGGGPGSRVCVVARPSRSGSTVFLAAAAAPQPGPCPGGAEPAGGATDGGPGPPRRE
+ALRAAFRQSAEGTVGTAPELIPGLVLGDRSAQGAALDDAMKASGLSHLSAVSGANVAMIL
+GAVAITLRSARVHRAVVLSAGLAVLGVFVVVVGPEPSVLRAAVMGALGALAVFFGRARQA
+FGLLTVGGTALLVAVPALAVEPAFHLSLAATAGIVLGGAPLDRALHAGLGRVLPDVVARW
+LSASLAVTVAAHLACQPIILAMTGEVSAYAVPANLLAAPAVPPVTVLGTLAAALALPAPG
+IAAALVAVIQWPAAWIGWVAHTSASLPGALRPWPAGALGAGLGVLLVAATLLGFAAVLLL
+ERRRAAPVRRVGRSAPRTRERLPALVVLAAALAAATTGAVGAVLVPRASGAAPPDWAVAF
+CDVGQGDMAVFRSGPRAGVVVDVGPEPGLARRCLDDLDVDRVDAVLLTHLHADHTGGLPG
+VVDRASRGAVHYATRDAPAQGRGGRGGEADGVDRPADAARLRTGATGTAGPVRWHVLLAD
+ARAPEENDASAQVLVTVESEAGPVTTLITGDMEEDASAAWVAGHRSDAAAPPRVDVLKVA
+HHGARNGGTAVPRAVGARLHMVSVGADNPYGHPHRATVDALGRLGPVARTDLHGTLALTA
+ADGPDPDGAPEITAHTVRPPSSVRTGP
+>4_1139
+MVSPAPGPPSDPVDRRARHREVPGPLEARWVPALLVCLTLGILGVAWDAPARSAAALTGL
+AVAATTVLGAARSTGRIRGVATATTLAGVAAALMLQHSAGPAAAASASGWTGAVHAGSPL
+RLELTLDGPATRSEATFGPRWSVPVRVETFGHPPRAPEAAVTARLTGGGAPPATIAAPLD
+GTAAPGGGPGSRVCVVARPSRSGSTVFLAAAAAPQPGPCPGGAEPAGGATDGGPGPPRRE
+ALRAAFRQSAEGTVGTAPELIPGLVLGDRSAQGAALDDAMKASGLSHLSAVSGANVAMIL
+GAVAITLRSARVHRAVVLSAGLAVLGVFVVVVGPEPSVLRAAVMGALGALAVFFGRARQA
+FGLLTVGGTALLVAVPALAVEPAFHLSLAATAGIVLGGAPLDRALHAGLGRVLPDVVARW
+LSASLAVTVAAHLACQPIILAMTGEVSAYAVPANLLAAPAVPPVTVLGTLAAALALPAPG
+IAAALVAVIQWPAAWIGWVAHTSASLPGALRPWPAGALGVGLGVLLVAATLLGFAAVLLL
+ERRRAAPVRRVGRSAPRTRERLPALVVLAAALAAATTGAVGAVLVPRASGAAPPDWAVAF
+CDVGQGDMAVFRSGPRAGVVVDVGPEPGLARRCLDDLDVDRVDAVLLTHLHADHTGGLPG
+VVDRASRGAVHYATRDAPAQGRGGRGGEADGVDRPADAARLRTGATGTAGPVRWHVLLAD
+ARAPEENDASAQVLVTVESEAGPVTTLITGDMEEDASAAWVAGHRSDAAAPPRVDVLKVA
+HHGARNGGTAVPRAVGARLHMVSVGADNPYGHPHRATVDALGRLGPVARTDLHGTLALTA
+ADGPDPDGAPEITAHTVRPPSSVRTGP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001137.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001137.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8d0b8c78589ca5587826480122a3f3fdc0b948ac
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001137.fa
@@ -0,0 +1,35 @@
+>0_1631
+MSAARSPRSGRAGRVDPLAWRKAEPAPLMLLKGPEDHAARWVTDKVTAALRERHGELEVH
+SLRAGEYQAGQLATAASPSLFAEPTLIKVDGLESMNDAFLEDALRLVQHGPGADDVTLVL
+RHAGGSRGKRLLDAVAKAGTVVDCVPLKKDEERLAFVLAEFRDRRRRIEEDAARSLLRAT
+GASLTELAAACAQLVDDTEGTVTAAMVDTYYGGRVEATSFAVADAALEGHAARAVSLVRH
+AMATGVHPVMVTAALALKARQVARMIDAHRPAGELAALLGVAPFQVRYIQQAARHWTPAG
+IAQAMEWIAQADAEAKGASRNPEFAVERAVIRVATAVSR
+>1_1180
+MSAARSPRSGRAGRTDPLAWRRAEPAPLMLLKGPEDHAARWVTDRVTQALRERHGQLEIH
+RLRAGEYQPGQLATAASPSLFAEPTLITVEGLEAMNDAFLEDALRLVQQGPGADDVTLVL
+RHTGGTRGKRLLDAVAKAGTVVECVPLKKDEERLAFVQAEFRDRRRRIDEEAARALIRAT
+GASLTELAAACAQLVDDTEGVVSVETVDTYYSGRVEATSFAVADAALEGQAARAVSLVRH
+AMATGVHPVMITAALALKARQVARMIDARRPAAELPSLLGVAPFQVRYIQQAARHWTAAG
+IAQAVEWIAQADAEAKGASRNPEFAVERAVIRVATAVSR
+>2_1528
+MSAARSTRSARGARGVDPLAWRRAEPAPLMLLRGPEEYAARWVADRVVATLQARHGSLET
+HRLRASDYQAGQLALAASPSLFAEPTLIRVDGLESMNDAFLEDALRLVAQGPGADDVTVL
+LRHTGGSRGKRLIDAVAAAGVVVECPALKKDEDRLALVQAEFREARRRIDEDAARALVRA
+TGASLTDLASACRQLIEDVEGTVTPQTVETYYGGRVEATSFAVADATLEGHAARAVSLTR
+HALATGVHPVMITSALAVKARQVARIIDARAGQGELASILGVAPFQVRFIQQAARHWTPA
+GIARAVEWIAQADAEVKGAARDADFAVERAVIRVATAVSR
+>3_908
+MSAARSPRSGRAGRTDPLAWRRAEPAPLMLLKGPEDHAARWVTDRVTQALRERHGQLEIH
+RLRAGEYQPGQLATAASPSLFAEPTLITVEGLEAMNDAFLEDALRLVQQGPGADDVTLVL
+RHTGGNRGKKLLDAVAQAGTVVECVPLKKDEERLAFVQAEFRDRRRRIDEEAARALIRAT
+GASLTELAAACAQLVDDTEGVVTVETVDTYYSGRVEATSFAVADAALEGQAARAVSLVRH
+AMATGVHPVMITAALALKARQVARMIDARRPAAELPSLLGVAPFQVRYIQQAARHWTAAG
+IAQAVEWIAQADAEAKGASRNPEFAVERAVIRVATAVSR
+>4_1138
+MSAARSPRSGRAGRTDPLAWRRAEPAPLMLLKGPEDHAARWVTDRVTQALRERHGQLEIH
+RLRAGEYQPGQLATAASPSLFAEPTLITVEGLEAMNDAFLEDALRLVQQGPGADDVTLVL
+RHTGGNRGKKLLDAVAQAGTVVECVPLKKDEERLAFVQAEFRDRRRRIDEEAARALIRAT
+GASLTELAAACAQLVDDTEGVVTVETVDTYYSGRVEATSFAVADAALEGQAARAVSLVRH
+AMATGVHPVMITAALALKARQVARMIDARRPAAELPSLLGVAPFQVRYIQQAARHWTAAG
+IAQAVEWIAQADAEAKGASRNPEFAVERAVIRVATAVSR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001142.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001142.fa
new file mode 100644
index 0000000000000000000000000000000000000000..125a09218de3d82314931b72398c7095973a4cbe
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001142.fa
@@ -0,0 +1,30 @@
+>0_1637
+MDWSSWGPAGHEEMTRRPGRPARDVPAAPGTVVEDVASGFTGAVIRVERAGGVHTVVLED
+RRGVRRGFPLGGGFWIDGEPVTLVPHVASAPRPPARTASGSRRVEGVRARTARASRIWVE
+GVHDAELVEKVWGEDLRLEGIVVEPLHGVDDLAGAIAAFDPGPRRRLGILVDHLVPGSKE
+ERIAAEAMRVPGAAGNVLILGHPYVDVWQVIKPAVLGIPTWPVVPKGQDWKTGVLQGLGW
+PHGTKEATGLGWKRLLSHVGSYADLEPSLLGRVEELIDFLTAEPER
+>1_1174
+MDWSSWGPAGHDDLTRRPARTVPDVPAAPGTVVEDVASGFTGAVIGIERSGGVHVVVLED
+RRGVRRGFPLGGGFWIDGEPVTLVPPTAAAPAAPARTASGSRRVEGARARTARASRIWVE
+GVHDAELVEKVWGEDLRLEGIVVEPLHGVDDLAGAIRAFAPGPRRRLGILVDHLVTGSKE
+ERLAAEAMRVPGAAGNVLILGHPYVDVWQVIKPSVLGIPAWPVVPKGQDWKTGILRGLGW
+PHGSKEATGLGWKRLLSHVTTYADLEPSLLGRVEELIDFLTAAPEH
+>2_1533
+MDWSSWGPGAHEDLARPAGRTAGEAPATPGTVVEDVASGFVGAVVRVERSGGTHVVVLED
+RRGVRRGFPLGPGFWVDGSPVVLVPPRSAAPAAAARTASGSRRVEGARARTARASRIWVE
+GVHDAELVEKVWGEDLRLEGIVVEPLHGVDDLPGAIRDFAPGPGRRLGILVDHLVAGSKE
+ERLAAEAMAVPGAAGNVLILGHPYVDVWQVIKPAVLGIDAWPVVPRGQDWKTGVLRGLGW
+PAGTKEATGLGWKRLLSHVRTYADLEPALLGRVEELIDFLTAPGA
+>3_902
+MDWSSWGPAGHDDLTRRPARTVPDVPATPGTVVEDVASGFTGAVSGIERSGGVHVVVLED
+RRGVRRGFPLGGGFWIDGEPVTLVPPTAAAPAAPARTASGSRRVEGARARTARASRIWVE
+GVHDAELVEKVWGEDLRLEGIVVEPLHGVDDLAGAIRAFAPGPRRRLGILVDHLVTGSKE
+ERLAAEAMRVPGAAGNVLILGHPYVDVWQVIKPSVFGIPAWPVVPKGQDWKTGILRGLGW
+PHGSKEATGLGWKRLLSHVTTYADLEPSLLGRVEELIDFLTAAPEH
+>4_1132
+MDWSSWGPAGHDDLTRRPARTVPDVPATPGTVVEDVASGFTGAVIGIERSGGVHVVVLED
+RRGVRRGFPLGGGFWIDGEPVTLVPPTAAAPAAPARTASGSRRVEGARARTARASRIWVE
+GVHDAELVEKVWGEDLRLEGIVVEPLHGVDDLAGAIRAFAPGPWRRLGILVDHLVTGSKE
+ERLAAEAMRVPGAAGNVLILGHPYVDVWQVIKPSVLGIPAWPVVPKGQDWKTGILRGLGW
+PHGSKEATGLGWKRLLSHVTTYADLEPSLLGRVEELIDFLTAAPEH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001143.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001143.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ddbcfca94b904329016ca6ae8a081d292e28d764
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001143.fa
@@ -0,0 +1,35 @@
+>0_1638
+MTEQPRRLQVLQAIVEEYVARREPVGSKALVERHALGVSSATVRNDMAALEEEGLIVAPH
+TSAGRVPTDKGYRVFVDRLSEVKPLSPAERRAVRTLLDPSTDTEHMMETTVRLLAQLTQQ
+VAVAQFPHEDGSTVRHLELVPLTPARVLVVLILSTGRVDQRHVVLETPLAEADLAVLRGL
+LLEAVLGLGPAQAAAVVDAAVARMRPEDREAAALVAGAVHALLEAGRQDRIVMAGTANLA
+RSTGDFGASIGPILEALEEQVVLLRLLTEMEHDAHGVSVRIGSENAGSLADTSVVAAAYG
+PGAVAKVGVVGPTRMDYPGTMAAVRAIARYLSRILTT
+>1_1173
+MSEQPRRLQVLQAIVEDYVALREPVGSKALVERHALGVSSATVRNDMAALEEEGLIVAPH
+TSAGRVPTDKGYRVFVDRLSEVKPLSPAERRAVRTLLDPETDTEHMMESTVRLLAQLTQQ
+VAVAQFPYEDGSTIRHLELVSLTPTRVLVVLILSTGRVDQRHAVLDRPVDEAELSVLRGL
+LLDALLGLGPVQAATVVDDVVTRVRPEHRQSAALVAAAVQDLLEAGREDRIVLAGTANLA
+RSPGDFGASIGPILEALEEQVVLLRLLTEMEQDAHGVSVRIGSENAGSLADTSVVAAAYG
+PGAVAKLGVIGPTRMDYPGTMAAVRAIARYLSRILTT
+>2_1534
+MTEQPRRLQVLQAIVEDYVSLREPVGSKALVERHALGVSSATVRNDMAALEEEGLIVAPH
+TSAGRVPTDKGYRVFVDRISEVKPLSAAERRAVRTLLDSEADTESMMEATVRLLAQLTRQ
+VAVVQFPHEDGSTVRHLDLVALTPERVLVVLILSTGRIEQRTVALARPVQDEDLAALRAV
+LLPVIEGLGPAQAAAVLDTPLEGLPPARRAAAVDVVGAVRGLLEAERQDRIVLAGTANLA
+RSTDDFHSSIGPILEALEEQVVLLRLLTEMGQDAHGVSVRIGAENGASLADTSVVAAAYG
+PGAVAKVGVIGPTRMDYPGTMAAVRAIARYLSRILTT
+>3_901
+MSEQPRRLQVLQAIVEDYVALREPVGSKALVERHALGVSSATVRNDMAALEEEGLIVAPH
+TSAGRVPTDKGYRVFVDRLSEVKPLSPAERRAVRTLLDPETDTEHMMESTVRLLAQLTQQ
+VAVAQFPHEDGSTIRHLELVSLAPTRVLVVLILSTGRVDQRHAVLDRPVDEAELSVLRGL
+LLDALLGLGPVQAATVVDDVVTRVRPEHRQSAALVAAAVHDLLEAGRQDRIVLAGTANLA
+RSPGDFGASIGPILEALEEQVVLLRLLTEMEQDAHGVSVRIGSENAGSLADTSVVAAAYG
+PGAVAKVGVIGPTRMDYPGTMAAVRAIARYLSRILTT
+>4_1131
+MSEQPRRLQVLQAIVEDYVALREPVGSKALVERHALGVSSATVRNDMAALEEEGLIVAPH
+TSAGRVPTDKGYRVFVDRLSEVKPLSPAERRAVRTLLDPETDTEHMMESTVRLLAQLTQQ
+VAVAQFPHEDGSTIRHLELVSLAPTRVLVVLILSTGRVDQRHAVLDRPVDEAELSVLRGL
+LLDALLGLGPVQAATVVDDVVTRVRPEHRQSAALVAAAVQDLLEAGREDRIVLAGTANLA
+RSPGDFGASIGPILEALEEQVVLLRLLTEMEQDAHGVSVRIGSENAGSLADTSVVAAAYG
+PGAVAKLGVIGPTRMDYPGTMAAVRAIARYLSRILTT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001145.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001145.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2dbee760c7be5892bd1303a310a045edd473dc44
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001145.fa
@@ -0,0 +1,30 @@
+>0_1640
+MTAPLFHLEPGALTGAVPGAEVSFGGPEARHAAASMRLAPGESVLLADGSGVRGHGTVLA
+AAPDAVTVRLDAVDEEPAAVPALVLVQALAKGDRDLMAVQAAVELGVDAVVPWEAERSIV
+RWKGPKAEKARQKWADTARAAAKQARRARVPEVRGHVSGTGVAGLASAPDDGARLVLVLH
+EDAERGLSEVPVERLREAAEIAVVVGPEGGVGPAELEACTAAGAVPVRLGPHVLRASTAG
+PAALAVLAHRLGRW
+>1_1171
+MTAPLFHLEPGALAGASAGAEVVFDGAEARHAAAAMRLAPGEAVLLADGSGTLGHGTVLA
+AAPDAVSVRLDAVAEEPAPTPALVLVQALAKGDRDLMAVQAAVELGVDAVVPWEAERSIV
+RWKGPKAAKARQKWADTARAAAKQARRARVPAVRDHVSGTAVAGLARDDDGGRLVLVLHE
+DAEHGVSAVPAERLSAAVEIAVVVGPEGGIGPAELEACVAAGAVPVRLGPHVLRASTAGP
+AALAVLQHRLGRW
+>2_1536
+MTAPLFLLDAGALAGVAPGAEVAFTGAEARHAAASMRLGAGESVLVADGSGARASCVVVD
+AAPSAVTVRVESLEHDAAPRPALVLVQALAKGDRDLMAVQASTELGVDAVVPWEAERSIV
+RWKGAKAAKAHQKWEDTVRAAAKQARRARVPEVRPVVSGTAVAALAGPDRLLLVLHEDAD
+LGLGGLPDADLEAAAEVALVVGPEGGVSPAELDACTAAGAVPVRLGPHVLRASTAGPAAL
+AVLQHRLGRW
+>3_899
+MTAPLFHLEPGALAGASAGAEVVFDGAEARHAAAAMRLAPGEAVLLADGSGTLGHGTVLA
+AAPDAVSVRLDAVAEEPAPTPALVLVQALAKGDRDLMAVQAAVELGVDAVVPWEAERSIV
+RWKGPKAAKARRKWADTARAAAKQARRARVPAVRDHVSGTAVAGLAWDDDGGRLVLVLHE
+DAEHGVSAVPAERLSAAVEIAVVVGPEGGIGPAELEACVAAGAVPVRLGPHVLRASTAGP
+AALAVLQHRLGRW
+>4_1129
+MTAPLFHLEPGALAGASAGAEVVFDGAEARHAAAAMRLAPGEAVLLADGSGTLGHGTVLA
+AAPDAVSVRLDAVAEEPAPTPALVLVQALAKGDRDLMAVQAAVELGVDAVVPWEAERSIV
+RWKGPKAAKARQKWADTARAAAKQARRARVPAVRDHVSGTAVAGLAWDDDGGRLVLVLHE
+DAEHGVSAVPAERLSAAVEIAVVVGPEGGIGPAELEACVAAGAVPVRLGPHVLRASTAGP
+AALAVLQHRLGRW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001146.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001146.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f6ad9dbe8c3eb734e58b86d0df05d6e996f291a4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001146.fa
@@ -0,0 +1,35 @@
+>0_1641
+MVRTLGPQDALLRILGGVFPAVDLTVRDQRLEMAGPVPDVASVRRVVEDLRSIARRDQAV
+TPEVMEQVVTHVRGAAAGRGAGQLHLDSILSGRGRRIRAKTLHQQDYVEAIDRSTVVFGI
+GPAGTGKTYLAMAKAVQALQAKEVNRIILTRPAVEAGERLGFLPGGLSEKIDPYLRPLYD
+ALHDMIEPESIPRLMEAGTIEVAPLAYMRGRTLNDAFVILDEAQNTTGEQMKMFLTRLGF
+GARMVVTGDTSQVDLPRGTRSGLSQAVEVLEGIEGLEMVRFDSSDVVRHSLVSAIVDAYD
+AARGAEPAPRGGRGHRGR
+>1_1170
+MSRPRDPEVIRPIVTVPPTTPTPPATAHEGVAFESADLMVRTLGPQDALLRILGGVFPTV
+DVTVRDQRLDLAGPVAEVATVRRVVEDLRSIARRDQAVTPEVMGQVVHHVRDAATGRGAG
+QLHLDSILSGRGRRIRAKTLHQQDYVEAIDRSTVVFGIGPAGTGKTYLAMAKAVQALQAK
+EVNRIILTRPAVEAGERLGFLPGGLSEKIDPYLRPLYDALHDMIEPESIPRLMEAGTIEV
+APLAYMRGRTLNDAFVILDEAQNTTGEQMKMFLTRLGFGARMVVTGDTSQVDLPRGTQSG
+LAQAVEVLEGIEGLEMVRFDSSDVVRHSLVSAIVDAYDAARGPAERSQKRGGARRGR
+>2_1537
+MIRPIVSDPSSHVVLPPVSVPGAESVSFESAELMVRTLGAHDALLRILAGVYPDVEVTVR
+DQSLGMSGPPRHVAQARRIVEDLRSLARRDAPVTPDVVEQVVSLVRDGETGRASGTLHLD
+SILSGRGRKIRAKTLHQQDYVEAIDRATIVFGLGPAGTGKTYLAMAKAVQALQAKEVTRI
+ILTRPAVEAGERLGFLPGGLSEKIDPYLRPLYDALHDMIEPESIPRLMESGTIEVAPLAY
+MRGRTLNDAFVILDEAQNTTGEQMKMFLTRLGFGARMVVTGDTSQVDLPRGVRSGLAEAV
+EVLEGVDGLEMVRFDSSDVVRHSLVSAIVDAYDGARGSGSAADPRPAGRGAQRGRSGRGR
+>3_898
+MSRPRDPEVIRPIVTVPPTTPTPPATAHEGVAFESADLMVRTLGPQDALLRILGGVFPTV
+DVTVRDQRLDLAGPVAEVATVRRVVEDLRSIARRDQAVTPEVMGQVVHHVRDAATGRGAG
+QLHLDSILSGRGRRIRAKTLHQQDYVEAIDRSTVVFGIGPAGTGKTYLAMAKAVQALQAK
+EVNRIILTRPAVEAGERLGFLPGGLSEKIDPYLRPLYDALHDMIEPESIPRLMEAGTIEV
+APLAYMRGRTLNDAFVILDEAQNTTGEQMKMFLTRLGFGARMVVTGDTSQVDLPRGTQSG
+LAQAVEVLEGIEGLEMVRFDSSDVVRHSLVSAIVDAYDAARGPAERSQKRGGARRGR
+>4_1127
+MSRPRDPEVIRPIVTVPPTTPTPPATAHEGVAFESADLMVRTLGPQDALLRILGGVFPTV
+DVTVRDQRLDLAGPVAEVATVRRVVEDLRSIARRDQAVTPEVMGQVVHHVRDAATGRGAG
+QLHLDSILSGRGRRIRAKTLHQQDYVEAIDRSTVVFGIGPAGTGKTYLAMAKAVQALQAK
+EVNRIILTRPAVEAGERLGFLPGGLSEKIDPYLRPLYDALHDMIEPESIPRLMEAGTIEV
+APLAYMRGRTLNDAFVILDEAQNTTGEQMKMFLTRLGFGARMVVTGDTSQVDLPRGTQSG
+LAQAVEVLEGIEGLEMVRFDSSDVVRHSLVSAIVDAYDAARGPAERSQKRGGARRGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001149.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001149.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8148a0a151d2e6fcd44a09b986c465640d48c9ec
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001149.fa
@@ -0,0 +1,35 @@
+>0_1644
+MTDLVDPARAADGHRSGFVSLVGRPNAGKSTLTNALVGEKVAITSSKPQTTRHTIRGIVH
+REDFQLVLVDTPGLHRPRTLLGQRLNDLVAETLGEVDAVGFCLPADEAIGPGDRFIAQQL
+AHLHRTPVVAVVTKTDKVGPEQLMAQLLAVTALGEEVLGPENGGEGFAAVVPVSAVAGRQ
+VDDVLEVLRGLLPEGPPLYPDGELTDEPEAVMIAELIREAALEGVRDELPHSVAVVVEEM
+ALREGRPDDRPLMDVWANLFVERDSQKGIIIGKGGSRLREIGARARAGIERMLGTKVHLD
+LRVKVAKEWQRDPKQLGRLGF
+>1_1167
+MTDLVDPARAADGFRSGFVSLVGRPNAGKSTLTNALVGEKVAITSSKPQTTRHTIRGIVH
+REDFQLVLVDTPGLHRPRTLLGERLNDLVAETLNEVDAVGMCLPADEAIGPGDRFIAQQL
+SYLHRTPVVAVVTKTDKVGPEQLMAQLVAVTALGDEVLGPENGGEGFAAVVPVSAVAGRQ
+VDDVLGVFAGLLPAGPPLYPDGELTDEPEAVMVAELIREAALEGVRDELPHSVAVMVEEM
+SLREDRPADRPLMDVWANVFVERDSQKGIIIGKGGSRLREIGAQARAGIERMLGTKVHLD
+LRVKVAKEWQRDPKQLGRLGF
+>2_1540
+MTSLLDPAVPEGHRSGFACLVGRPNAGKSTLTNALVGEKVAITSSKPQTTRHTIRGIVHR
+PDFQLVLVDTPGLHRPRTLLGERLNALVQETLSEVDVVGFCLPADEKIGPGDRFIAQQLA
+ALRRTPVVAIVTKTDKTDPQRVAEQLLAVTALGDEVLGPENGGRGFAAVVPVSAVAGRQV
+EDVESVLAQLLPDGPPLYPDGELTDEPEAIMVAELIREAALEDVRDELPHSVAVVVEEMN
+PREGRPEERPLLDVYANVFVERDSQKGIIIGKGGSRLRAIGTQARTGIERMLGTPVHLDL
+RVKVAKDWQRDPKHLNRLGM
+>3_895
+MTDLVDPARAADGFRSGFVSLVGRPNAGKSTLTNALVGEKVAITSSKPQTTRHTIRGIVH
+REDFQLVLVDTPGLHRPRTLLGERLNDLVAETLNEVDAVGMCLPADEAIGPGDRFIAQQL
+SYLHRTPVVAVVTKTDKVGPEQLMAQLVAVTALGDEVLGPENGGEGFAAVVPVSAVAGRQ
+VDDVLGVFAGLLPAGPPLYPDGELTDEPEAVMVAELIREAALEGVRDELPHSVAVVVEEM
+SLREDRPADRPLMDVWANVFVERDSQKGIIIGKGGSRLREIGAQARAGIERMLGTKVHLD
+LRVKVAKEWQRDPKQLGRLGF
+>4_1124
+MTDLVDPARAADGFRSGFVSLVGRPNAGKSTLTNALVGEKVAITSSKPQTTRHTIRGIVH
+REDFQLVLVDTPGLHRPRTLLGERLNDLVAETLNEVDAVGMCLPADEAIGPGDRFIAQQL
+SYLHRTPVVAVVTKTDKVGPEQLMAQLVAVTALGDEVLGPENGGEGFAAVVPVSAVAGRQ
+VDDVLGVFAGLLPAGPPLYLDGELTDEPEAVMVAELIREAALEGVRDELPHSVAVVVEEM
+SLREDRPADRPLMDVWANVFVERDSQKGIIIGKGGSRLREIGAQARAGIERMLGTKVHLD
+LRVKVAKEWQRDPKQLGRLGF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001159.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001159.fa
new file mode 100644
index 0000000000000000000000000000000000000000..47d2d2c28c505252cd6ba13b4c7e2a9a940b46a0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001159.fa
@@ -0,0 +1,20 @@
+>0_1654
+MKVAANIFWIIGLFFIAAATLYGFWVEWTEWAGIPAIYAVGGMSWMIAWYLQSTEKKFGL
+GPADDEDGEITDYAGTYGTFAPWSWWPLGLGVACAILITGLAVGWWVFIIGAVAAAYFTF
+GWVYEFSRGKYAH
+>1_1156
+MKVAANIFWVIGLFFVGAGTLYGFWNEWTEWAGIPAIYALGGMSWMIAWYLNAAERKYGV
+GPADDEDGQIVEYAGTYGTFAPWSWWPLGLGLACAIIVTGLAVGWWVFVIGIIAGAYFTF
+GWVYEFSRGKFAH
+>2_1551
+MKIASNIFWIIGAFLVAVATLYGFWVKWTEWAGIPAIYALGAMCWMIAWYVQSTDKRHGL
+GPADDEDGEIVEYAGTYGTFAPSSWWPLGVAVACAMLVTGLAVGWWIFALGVIAGVYFTF
+GWVYEFSRGKYAH
+>3_884
+MKVAANIFWIIGLFFIAAATLYGFWVEWTEWAGIPAIYAVGGMSWMIAWYLNVTERKYGV
+GPADDADGQIADYAGTYGTFAPWSWWPLGLGLACAIIVTGLAVGWWIFIIGVIAGAYFTF
+GWVYEFSRGKYAH
+>4_1113
+MKVAANIFWVIGLFFVGAGTLYGFWNEWTEWAGIPALYALAGMSWMIAWYLNAAERKYGV
+GPADDEDGQIVDYAGTYGTFAPWSWWPLGLGLACAIIVTGLAVGWWVFIIGVIAGAYFTF
+GWVYEFSRGKFAH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001160.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001160.fa
new file mode 100644
index 0000000000000000000000000000000000000000..57a74ae54b4514da0b41816b8f6c723b2d679cb4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001160.fa
@@ -0,0 +1,55 @@
+>0_1656
+MSTTVNEFQPATSTGRIANFVDTRMGMSPIVKFFARKIFPDHWTFMFGEVALYSFVILLL
+SGAFLTFFFDPSMSEVVYNGAYAPLRGIEMSAAYASTLDISFDVRGGLFMRQLHHWAALL
+FVAAMSVHMLRVFFTGAFRRPRELNWLVGCFLLMAGWAAGFTGYSLPDEVLSGNGLRIID
+GILKSLPIVGTYLSAFFFGGEFPGHSIIGRLYALHIMVVPAAILLLIGIHLFMVVVHKHT
+QYPGPGRTENNVVGYPVGPVYAAKAGGFFFIVFGVLALIASTVTINANWNYGPYDPSPVQ
+AGTQPDWYIGVFDGALRLMPGMIGDFSFLWNIPMPWGSSVSLPMGVLVPLIPIGVLIVGM
+CAWPWIERWITKDDTEHHLLDRPRNAPTRTGIGVAAVIWYCVMWAAASSDLIATHFRLSL
+NDVLYALRTLFFLGPVIGFIVTRRICLSLQRKDRELVLHGHEAGVIEMSPDGGFHERHRQ
+LTDHELYRLVSFEDRRPVPALPNRSGKVGMIEKARAGLNRMFYQDRVAPVTREELVEARA
+HGHHGVEDGGHHELGADPSSHNPKIDG
+>1_1154
+MSTTVNEFQPATSTGRIANFVDTRTGMSPIVKFFARKIFPDHWTFMFGEVALYSFVILLL
+SGAFLTFFFDPSMSEVVYNGAYAPLRGIEMSAAYASTLDISFDVRGGLFMRQLHHWAALM
+FVAAMSVHMLRVFFTGAFRRPRELNWLVGCFLLMAGWAAGFTGYSLPDEVLSGNGLRIID
+GILKSLPLVGTYLSAFFFGGEFPGHSVIGRLYALHIMIVPAAILLLIGIHLFMVVVHKHT
+QYPGPGRTEDNVVGYPVGPVYAAKAGGFFFIVFGVLALIASTVTINANWNYGPYDPSPVQ
+AGTQPDWYIGVFDGALRLMPGMIGDYSFLWNIPMPWGSSVSLPMGVLVPLIPVGVLLVGM
+CAWPWIERWITKDDTEHHLLDRPRNAPARTGIGVAAVVWYCVMWAAASSDLIATHFHLSL
+NDVLYVLRALFFLGPVIAFIVTRRICLSLQRKDRELVLHGHEAGVIEMSPEGGFHERHRP
+LTDYELYRLVAFEDRRPVPAIPGRNGKVGALEKARAGLNRMFYQERVAPVSREELVEART
+HGQHGHEEHPVELGHGSDAPRLER
+>2_1552
+MSTATHEYQPATGTGRLANFLDTRVGLSPIVKFFGRKTFPDHWTFMFGEVALYSFVILLL
+SGAFLTFFFDPSMSHVTYDGAYAPLRGIEMSAAMASALDISFDIRGGLFMRQLHHWSALL
+FVASMSVHMLRIFFTGAFRRPRELNWVVGCFLLMAGWAAGFTGYSLPDDVLSGNGLRIID
+GILKAMPLVGSYLSAFLFGGEFPGYSVIGRLYALHIMIVPAIILLLIAVHLFMVVVHKHT
+QYPGPGRTENNVVGYPVGPVYAAKAGGFFFIVFGVLALIASTVTINSIWIYGPYDPSPVS
+AGTQPDWYIGPFDGALRLMPGMIGDFSFLWNIPMPWGSRVSLPMGVLTPLIPVGVILVGM
+ISWPWIERWITKDDREHHLLDRPRNAPARTGIGVGMMIMWCTMWAAASSDLIATHFHLSL
+NDVLYFLRALFILGPILGFIVTRRICISLQRRDRETVLHGHESGVVEMSPEGGFSERHRQ
+LTDYEMYRLVSFEDRRPVPATPGRNGKVSGAERMRAGLNRMFYQERVAPVSREELVEART
+HGHGEHVGAVQGGSHSAELGH
+>3_883
+MSTTVNEFQPATTTGRIANFVDTRMGMSPIVKFFGRKIFPDHWTFMFGEVALYSFVILLL
+SGAFLTLFFDPSMSEVVYDGAYAPLRGIEMSAAYASTLDISFDVRGGLFMRQLHHWAALM
+FVAAMSVHMLRVFFTGAFRRPRELNWLVGCFLLMAGWAAGFTGYSLPDEVLSGNGLRIID
+GILKSLPLVGTYLSAFFFGGEFPGHSVIGRLYALHIMIVPAAILLLIGIHLFMVVVHKHT
+QYPGPGRTEDNVVGYPVGPVYAAKAGGFFFIVFGVLALIASTVTINANWNYGPYDPSPVQ
+AGTQPDWYIGVFDGALRLMPGMIGDYSFLWNIPMPWGSSVSLPMGVLVPLIPVGVLLVGM
+CTWPWIERWITKDNTEHHLLDRPRNAPARTGIGVAAVVWYCVMWAAASSDLIATHFRLSL
+NDVLYVLRALFFLGPVIAFIVTRRICLSLQRKDRELVLHGHEAGVIEMSPEGGFHERHRQ
+LTDYELYRLVSFEDRRPVPAIPGRNGKVGMLEKARAGLNRMFYQDRVAPVSREELVEART
+HGQHGHEEHPVELEHGSHAPHLDR
+>4_1108
+MSTTVNEFQPATTTGRIANFVDTRMGMSPIVKFFGRKIFPDHWTFMFGEVALYSFVILLL
+SGAFLTLFFDPSMSEVVYDGAYAPLRGIEMSAAYASTLDISFDVRGGLFMRQLHHWAALM
+FVAAMSVHMLRVFFTGAFRRPRELNWLVGCFLLMAGWAAGFTGYSLPDEVLSGNGLRIID
+GILKSLPLVGTYLSAFFFGGEFPGHSVIGRLYALHIMIVPAAILLLIGIHLFMVVVHKHT
+QYPGPGRTEDNVVGYPVGPVYAAKAGGFFFIVFGVLALIASTVTINANWNYGPYDPSPVQ
+AGTQPDWYIGVFDGALRLMPGMIGDYSFLWNIPMPWGSSVSLPMGVLVPLIPVGVLLVGM
+CTWPWIERWITKDNTEHHLLDRPRNAPARTGIGVAAVVWYCVMWAAASSDLIATHFHLSL
+NDVLYVLRALFFLGPVIAFIVTRRICLSLQRKDRELVLHGHEAGVIEMSPEGGFHERHRQ
+LTDYELYRLVSFEDRRPVPAMPGRNGKVGALEKARAGLNRMFYQDRVAPVSREELVEART
+HGQHGHEDGGHHELGADPSSHNPKIDG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001164.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001164.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bf72c21a02305b13bb05b0bc52ea3045e0f331ec
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001164.fa
@@ -0,0 +1,35 @@
+>0_1660
+MSIPNTTAAAPETTWPDVFRALTFGEDLSDEAAAWAMGEMMAGDATEGQVGGFLLALAAK
+GVTVPELRGLTEAMVQAARPVQVTGETLDIVGTGGDRLGTVNLSTMSSLVAAGAGARIVK
+HGNRGASSTAGAADVIEALGVDLSMPREKAEECAEAVGITFLFAQNYHPSMKYVAPVRKQ
+LGVPTVFNFLGPLSNPAQVSAQALGCSSEVMVPLLARVLADRGVRGFVFRGSDGRDKITT
+SGPSTVIEVRHEVTAHELDPRDFGIELAPVEALAGRDGAYNATLVHALLAGEKGPIRDAV
+LLNAATGLTAWDTEAQGPLADRLAANMARAAESLDSGAARDVLDRWVAFSRS
+>1_1150
+MSTPENTAAVLGTSWPEVFRALTVGEDLSDDVAAWAMGEMMAGDATEGQVGGFLLALAAK
+GVTVPELRGLTEAMVQAANPVHVPGETLDVVGTGGDRLGTVNLSTMSSLVAAGAGARIVK
+HGNRGASSTAGAADVIEALGVDLSMPTRKAEECAEAVGITFLFAQNYHPSMKYVAPVRKQ
+LGVPTVFNFLGPLSNPAQVTAQALGCSSQAMVPLLAQVLADRGVRGFVFRGADGRDKITT
+SGPSTVMEVRDGVRTHELDPRELGIDLAPVQALAGRDGAYNATLVRALLAGEKGPIRDAV
+LLNAAAGLTAWDRGADAPLMERLAANMARAAESIDSGAARDVLDRWVAFSRS
+>2_1556
+MRETVTHTWPEVFRRLTLGQDLDDAAAEWAMGEMMSGDATEGQVGAFLLALAAKGETVPE
+LRGLTDAMVAKARRVHVSGETLDIVGTGGDRLGTVNLSTMSSLVAAGAGARIVKHGNRGA
+SSTAGAADVIEALGVDLSMPPAKAEECAEAVGITFLFAQNYHPSMKYVAPVRKQLGVPTV
+FNFLGPLSNPAQASAQALGCSSEEMVPLLAQVLADRGVRGFVFRGSDGRDKITTSGPSTI
+MEVRGGVTAHEIDPRDFGIELAPVEALAGRDGAYNATLVRGLLAGEHGPIRDAVLLNAAA
+GLTAWDVEAEGPLMDRLRTNMARAAESIDSGAAADVLERWVQFSRS
+>3_879
+MSTPENTAAVLGTSWPEVFRALTVGEDLSDDVAAWAMGEMMAGDATEGQVGGFLLALAAK
+GVTVPELRGLTEAMVQAANPVHVPGETLDVVGTGGDRLGTVNLSTMSSLVAAGAGARIVK
+HGNRGASSTAGAADVIEALGVDLSMPTRKAEECAEAVGITFLFAQNYHPSMKYVAPVRKQ
+LGVPTVFNFLGPLSNPAQVTAQALGCSSEAMVPLLAQVLADRGVRGFVFRGADGRDKITT
+SGPSTVMEVRDGVRTHELDPRELGIDLAPVQALAGRDGAYNATLVRALLAGEKGPIRDAV
+LLNAAAGLTAWDRDADAPLMERLAANMARAAESIDSGAARDVLDRWVAFSRS
+>4_1104
+MSTPENTAAVLGTSWPEVFRALTVGEDLSDDVAAWAMGEMMAGDATEGQVGGFLLALAAK
+GVTVPELRGLTEAMVQAANPVHVPGETLDVVGTGGDRLGTVNLSTMSSLVAAGAGARIVK
+HGNRGASSTAGAADVIEALGVDLSMPTRKAEECAEAVGITFLFAQNYHPSMKYVAPVRKQ
+LGVPTVFNFLGPLSNPAQVTAQALGCSSEAMVPLLAQVLADRGVRGFVFRGADGRDKITT
+SGPSTVMEVRDGVRTHELDPRELGIDLAPVQALAGRDGAYNATLVRALLAGEKGPIRDAV
+LLNAAAGLTAWDRDADAPLMERLAANMARAAESIDSGAARDVLDRWVAFSRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001170.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001170.fa
new file mode 100644
index 0000000000000000000000000000000000000000..904d1c3b6140f503e7f1a831dfc4f8fbcd599636
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001170.fa
@@ -0,0 +1,20 @@
+>0_1667
+MDWIEANAGWLWLVAAAGLIGVELLTLDLVFLMIAAGAGAAGVVALAGGPLPLQLAAFAV
+VALLMLAAVRPVALRHLRKDTGAGASYLDTLPGRRVAAQGAITAEAGTLTVDGDTWSARV
+EDGAPDAAPGAEVTVLRVEGATLVVRPLPQIDWEDGRS
+>1_1144
+MEWIEANAGWLWLVLAAGLAGVELLTLDLVFLMIAAGAGAAGVVALVGGPLALQLAAFAA
+VALLMLAAVRPVALRHLRKDTGAGASYLDTLPGRRVAAQGAITGDAGTLAVDGDTWSARV
+EPGAPEVAPGDEVTVLRIDGATLVVRPLPRIDWEADGA
+>2_1565
+MEWIEANADWLWLVLALGLVGAELLSLDLVLAMLAAGALSAGVAALAGAPLGLQLGVFVV
+VSLLTLVAVRPAAMRRLHPDPAVGASWLDGLSGRRLTATGPVTDEGGRIDVDGETWSARV
+EPGAAPAAHGQGVTVLRVEGAHLILRPDPVIDWDAPAHD
+>3_872
+MEWIEANAGWLWLVLAAGLAGVELLTLDLVFLMIAAGAGAAGVVALVGGPLALQLAAFAA
+VALLMLAAVRPVALRHLRKDTGAGASYLDTLPGRRVAAQGAITGDAGTLAVDGDTWSARV
+EPGAPDVAPGDEVTVLRIDGATLVVRPLPRIDWQADGA
+>4_1094
+MEWIEANAGWLWLVLAAGLAGVELLTLDLVFLMIAAGAGAAGVVALVGGPLALQLAAFAA
+VALLMLAAVRPVALRHLRKDTGAGASYLDTLPGRRVAAQGAITGDAGTLAVDGDTWSARV
+EPGAPEVAPGDEVTVLRIDGATLVVRPLPRIDWEADGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001173.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001173.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9bde0055ea5bf5354b635ffab545c677c7bb064a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001173.fa
@@ -0,0 +1,30 @@
+>0_1670
+MRVLTIIPTYNEIESLPLTLGRLRDAVPTSDVLVVDDASPDGTGQWADARAAQDPSVHVL
+HRTTKDGLGGAYIAGFRWGLERGYDVLVEMDADGSHQPEQLPRLLDAVRTADLVIGSRRV
+PGGKMVNWPASRKMISWAGSLYPRIMLGLRLTDVTAGYRAYRAETLRAIDLDAIESKGYG
+FQVDMTFRTARLGKRIVEVPITFVERELGESKMSGGIIGEAVVNVTRWGLAARWEGLRSR
+LGL
+>1_1141
+MRVLTIIPTYNEIESLPLTLGRLRDAVPESDVLVVDDASPDGTGDWADARAAEDPSVHVL
+HRTTKDGLGGAYIAGFRWGLERGYDVLVEMDADGSHQPEQLPRLLEAVRTADLVIGSRRV
+PGGKMVNWPTSRKMISWAGSLYPRIMLGLNLTDITAGYRAYRADTLRAIDLDAIESKGYG
+FQVDMTFRTARLGKRIVEVPITFVERELGESKMSGGIIGEAVVNVTRWGLAARWEGLRAR
+LGL
+>2_1568
+MRVLTIIPTYNEIESLPLTLGRLRDAVPDSDVLVVDDASPDGTGAWADARAAEDDHVHVL
+HRAEKNGLGGAYIAGFRWGLERGYDVLVEMDADGSHQPEQLPRLLEAVRTADLVIGSRRV
+PGGKMVNWPASRKLISAAGSLYPRIMLGLKLTDITAGYRAYRADTLRRIDLGAVQSKGYG
+FQVDMTFRVARLGLRIVEVPITFVERELGESKMSGGIVGEAVVNVTKWGLQARWETLTGR
+GPQRG
+>3_869
+MRVLTIIPTYNEIESLPLTLGRLRDAVPESDVLVVDDASPDGTGDWADARAAEDPSVHVL
+HRTTKDGLGGAYIAGFRWGLERGYDVLVEMDADGSHQPEQLPRLLEAVRTADLVIGSRRV
+PGGKMVNWPTSRKMISWAGSLYPRIMLGLNLTDITAGYRAYRADTLRAIDLDAIESKGYG
+FQVDMTFRTARLGKRIVEVPITFVERELGESKMSGGIIGEAVVNVTRWGLAARWEGLRAR
+LGL
+>4_1091
+MRVLTIIPTYNEIESLPLTLGRLRDAVPESDVLVVDDASPDGTGDWADARAAEDPSVHVL
+HRTTKDGLGGAYIAGFRWGLERGYDVLVEMDADGSHQPEQLPRLLEAVRTADLVIGSRRV
+PGGKMVNWPTSRKMISWAGSLYPRIMLGLNLTDITAGYRAYRADTLRAIDLDAIESKGYG
+FQVDMTFRTARLGKRIVEVPITFVERELGESKMSGGIIGEAVVNVTRWGLAARWEGLRAR
+LGL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001175.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001175.fa
new file mode 100644
index 0000000000000000000000000000000000000000..374af94c87090fe0da3c204b305ff164489700cf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001175.fa
@@ -0,0 +1,90 @@
+>0_1672
+MSHAPASATPPEEPQLSPAERFARAKAARHHAGSELGRFASRLGFPLDDFQRRACAEVED
+GHGVLVAAPTGAGKTVVGEFAVHLALARGTKAFYTTPIKALSNQKHADLSRVHGAENVGL
+LTGDTSVNPDAPVVVMTTEVLRNMLYAQSDTLTDLGFVVMDEVHYLADRFRGPVWEEVII
+HLPEHVQLISLSATVSNAEEFGAWLDTVRGATTVIVSEHRPVPLWQHVMAGGRLYDLFAE
+DIAFEDTADRDGEALLNPELKRLGQEAERRSERPDWGRPGRHRGRGGRDGGQRGRGGRGG
+DGRKGGRDADRRGRHGSHAMDREQPATGRVRGQEDGERRGPRLSTSRPEMIRALDREGLL
+PCITFIFSRTGCDAAVEQCLRAGLDLTTAHEKALVAERVEQAARLLPVEDLEILGYWAWR
+DGLSRGFAAHHAGMLPPFKEAVEDLFAAGALKAVFATETLALGINMPARSVVIEKLVKFN
+GENHVDITPGEYTQLTGRAGRRGIDVEGHAVVMWRPGLDPAAVAGLASRRTYPLKSSFRP
+TYNMSANLLAQVGAERARGILESSFAQFQADRSVVGLAREVRSKQASLEKYEKAMQCHLG
+DFSEYLALRKELASAEKSGSQGRRRAQLAAVKESLADLAVGDVVELDAGRSLGRAVVVFP
+AGNPQNPRVGVVTDKAQLRRITVDDVTGPVEPVAGAALPQVLQVKTPTQRKDVAALMREA
+VRTGRPPAGGGRRTSGFRLREDPAAPRVEELRRALQRHPCHACQDREEHARWGDRWWGMR
+REVSVLRERIAGRTNTIARTFDRVVGLLRSYGYVHEDASSPRQALTARGEALRRIYGERD
+LFTSLVLQDPTVQGLTPEEWAAVAALLVYQGKGEAGHGVVPMPTARLAEVADAAERIEER
+LRADEAQARLEPTPPTDPGLVGPMHRWVRGASLRRTLEGADLAAGDFVRWARQVIDVLDQ
+LANVPGDARRSRACRKAADLVSRGVVATSLPAATAREADED
+>1_1139
+MAHHPASATPHDEPELSPAERYARARAARHHAGSELGRFAARVGFPLDDFQRRACAEVED
+GHGVLVAAPTGAGKTVVGEFAVHLALARGTKAFYTTPIKALSNQKHADFARVHGAENVGL
+LTGDTSVNPDAPVVVMTTEVLRNMLYAQSDTLIDLGFVVMDEVHYLADRFRGPVWEEVII
+HLPEHVQLISLSATVSNAEEFGAWLDTVRGATTVIVSEHRPVPLWQHVMAGGRLYDLFAE
+DIAFEDTADRDGEALLNPELKRLGEETERRFQRADWGRPGRQQHRDGRGGGPKGRVRGGR
+RTTRDGGRGRNGSSALDRERPVSGRPGGHDGGQRRGPRLSTSRPEMIRALDRDGLLPCIT
+FIFSRTGCDAAVEQCLRAGLDLTTAREKALVAERVEEAARLLPVEDLEILGFWAWRDGLS
+RGFAAHHAGMLPPFKEAVEDLFAAGALKAVFATETLALGINMPARSVVIEKLVKFNGENH
+VDITPGEYTQLTGRAGRRGIDVEGHAVVMWRPGLDPAAVAGLASRRTYPLRSSFRPTYNM
+SANLLAQVGAERARGILESSFAQFQADRSVVGLAREVRSKQASLEKYEEAMQCHLGDFAE
+YLTLRKELAAAEKSGSQGRRRAHLAAVKDSLANLAVGDVVELDAGRALGRAVVVFPAGNL
+QNPRVGVVTDKAQLRRITVDDVAGPVEPVAGAALPQVVQVKTPAQRKDVAALMREAVRTG
+RPPAGGRRTAGFRLREDPAAPRVEELRRALRRHPCHGCQDREEHARWGDRWWAMRREVSV
+LRERIAGRTNTIARTFDRVVGLLRAYGYVQEDASSPRAALTERGEALRRIYGERDLFTSL
+VLQDPATDGLTPEEWAAVAALLVYQGRGEAEPGLVPMPTPRLARVAEAAERIEERLRTDE
+AQARLEPTPRTDPGLVAPMHRWVRGATLRRTLDGADLAAGDFVRWARQVIDVLGQLANVP
+GDTRRSRACRRAADLVSRGVVATSLPAASAPRADED
+>2_1570
+MAPHTHHDLPPEEPALSPAERFARSRASASRPGTELSRFAARLGFPLDEFQLEACREVEA
+GHGVLVAAPTGAGKTVVGEFAVHLGLARGRKAFYTTPIKALSNQKYADLAAVHGADRVGL
+LTGDTSVNPDAPVLVMTTEVLRNMLYADSEALTDLGFVVMDEVHYLADRFRGPVWEEVII
+HLPEHVQLISLSATVSNAEEFGAWLDTVRGATTVVVSEHRPVPLWQHVMAGGRLYDLFAE
+DVAFEAAADADGTPLLNPELQRMAQEASRRVERPDWGRTGHRGRGRGGPGGRGAGRGRGK
+GGPRGGREGASSGWDRERPHRADASPGDGERRALGLSTSRPEMIRALDREGLLPCITFIF
+SRAGCDGAVEQCLRAGLDLTDRREKALIAERVEQAAAALPPEDLEILGFWAWRDGLSRGF
+AAHHAGMLPPFKEAVEDLFAAGALKAVFATETLALGVNMPARSVVLEKLVKFNGESHVDV
+TPGEYTQLTGRAGRRGIDVEGHAVVLWRPGLDPSAVAALASRRTYPLRSSFRPTYNMSVN
+LLAQVGAERARGILESSFAQFQADRSVVGLAREVRAKQSSLEKYADAMACDRGDFAEYLS
+LRKELAAAEKSGSRGRRREHLRAVKESLADLAVGDVVELHDGRALGRVVVVAAAGNPQNP
+RVAVVTDKAQLRKVAVEDLVDPVEPVAGAALPQTVQVKTPSQRKDVAAAMREAVRAHRPP
+TGGTRRGTGFRLREEVASPRLEELRRALQAHPCHACPDREDHARWGERWWDMRREVSLLR
+ERIAGRTNTIARTFDRVVELLGRLGYVGDDPDAPSRALTERGQTLRRIYGERDLLTSLVL
+HDPSTRSLTPEEWACVAALLVYQGKGDTQGLPVAMPTARLQALAEAVDRIEGGLREDETA
+ARLEPTPPTDPGLVAPLHRWVRGASLRDSLHGADLAPGDFVRWARQVIDVLGQIAQVPGD
+ARRTRACRKAADLVGRGVVAASLPAAAAGADGVEGEEPDRVDR
+>3_867
+MAHHPASATPHDEPELSPAERYARARAARHHAGSELGRFAARVGFPLDDFQRRACAEVED
+GHGVLVAAPTGAGKTVVGEFAVHLALARGTKAFYTTPIKALSNQKHADLARVHGAENVGL
+LTGDTSVNPDAPVVVMTTEVLRNMLYAQSDTLIDLGFVVMDEVHYLADRFRGPVWEEVII
+HLPEHVQLISLSATVSNAEEFGAWLDTVRGATTVIVSEHRPVPLWQHIMAGGRLYDLFAE
+DIAFEDAADRDGEALLNPELKRLGEEAERRFQRADWGRPGRQQHRDGRGGGTKGRARGGR
+HTGRDGGRGRTGSSALDRERPVSGRPGGHDGGPRRGPRLSTSRPEMIRVLDRDGLLPCIT
+FIFSRTGCDAAVEQCLRAGLDLTTAREKALVAERVEEAARLLPVEDLEILGFWAWRDGLS
+RGFAAHHAGMLPPFKEAVEDLFTAGALKAVFATETLALGINMPARSVVIEKLVKFNGENH
+VDITPGEYTQLTGRAGRRGIDVEGHAVVMWRPGLDPAAVARLASRRTYPLRSSFRPTYNM
+SANLLAQVGAEQARGILESSFAQFQADRSVVGLARELRSKQASLEKYEEAMQCHLGDFAE
+YLTLRKELAAAEKSGSQGRRRAHLAAVKDSLANLAVGDVVELDAGRSLGRAVVVFPAGNP
+QNPRVGVVTDKAQLRRITVDDVAGPVEPVAGAALPQVVQVKTPAQRKDVAALMREAVRTG
+RPPAGGRSTAGFRLREDPAAPRVEELRRALRRHPCHGCQDREEHARWGDRWWAMRREVSV
+LRERIAGRTNTIARTFDRVVGLLRAYGYVHEDAPSPRAALTERGEALRRIYGERDLFTSL
+VLQDPAMDGLTPEEWAAVAALLVYQGKGETEPGLVPMPTPRLARVAEAAERIEERLRTDE
+AQARLEPTPRTDPGLVAPMHRWVRGATLRRTLDGADLAAGDFVRWARQVIDVLGQLANVP
+GDTRRSRACRRAADLVSRGVVATSLPAASAPRADED
+>4_1089
+MAHHPASATPHDEPELSPAGRYARARAARHHAGSELGRFAARVGFPLDDFQRRACAEVED
+GHGVLVAAPTGAGKTVVGEFAVHLALARGTKAFYTTPIKALSNQKHADFARVHGAENVGL
+LTGDTSVNPDAPVVVMTTEVLRNMLYAQSDTLIDLGFVVMDEVHYLADRFRGPVWEEVII
+HLPEHVQLISLSATVSNAEEFGAWLDTVRGATTVIVSEHRPVPLWQHVMAGGRLYDLFAE
+DIAFEDTADRDGEALLNPELKRLGEETERRFQRADWGRPGRQQHRDGRGGGPKGRVRGGR
+RTTRDGGRGRNGSSALDRERPVSGRPGGHDGGQRRGPRLSTSRPEMIRALDRDGLLPCIT
+FIFSRTGCDAAVEQCLRAGLDLTTAREKALVAERVEEAARLLPVEDLEILGFWAWRDGLS
+RGFAAHHAGMLPPFKEAVEDLFAAGALKAVFATETLALGINMPARSVVIEKLVKFNGENH
+VDITPGEYTQLTGRAGRRGIDVEGHAVVMWRPGLDPAAVAGLASRRTYPLRSSFRPTYNM
+SANLLAQVGAERARGILESSFAQFQADRSVVGLAREVRSKQASLEKYEEAMQCHLGDFAE
+YLTLRKELAAAEKSGSQGRRRAHLAAVKDSLANLAVGDVVELDAGRALGRAVVVFPAGNL
+QNPRVGVVTDKAQLRRITVDDVAGPVEPVAGAALPQVVQVKTPAQRKDVAALMREAVRTG
+RPPAGGRRTAGFRLREDPAAPRVEELRRALRRHPCHGCQDREEHARWGDRWWAMRREVSV
+LRERIAGRTNTIARTFDRVVGLLRAYGYVQEDASSPRAALTERGEALRRIYGERDLFTSL
+VLQDPATDGLTPEEWAAVAALLVYQGRGEAEPGLVPMPTPRLARVAEAAERIEERLRTDE
+AQARLEPTPRTDPGLVAPMHRWVRGATLRRTLDGADLAAGDFVRWARQVIDVLGQLANVP
+GDTRRSRACRRAADLVSRGVVATSLPAASAPRADED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001176.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001176.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e42d906699fbe4b49662b0da56aaba27aec912c1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001176.fa
@@ -0,0 +1,30 @@
+>0_1673
+MSEVEEVARRTRRRRRRDNPTGEMPLREHLTELRNRVIKAGVAVLLGMVVGFLIYQPVMA
+ELFRPVNELSRDGRISAIAYDTVASPFDLMLKVSLFIGLIVSSPVWLYQIWAFIVPGLKK
+AEKKYALGFIAAAVPLFLLGMGLGWLVMPQAVQFFVGFTPEGGATLPTASVYISFVTRLY
+LAFGVAMVLPVLLVGLNMLGVLPGRTIVKHWRITVFLIMLIAAIAAPGADAISMVYMAVP
+LVLLFGVAIALCLWGDRRRARRAVRREQDVEAELASGPKPLHEI
+>1_1138
+MTEVDEVARRTRRRRKRRDNPTGEMPLREHLTELRNRLLKSALAVAVGMVIGFLVYQPVM
+AELFRPVKEIASQGHTAAVAYDTVASPFDLMLKVSMFIGLILSSPVWLYQIWAFIVPGLK
+KAEKKYALGFIAAAVPLFIFGIALGWLVMPQAVQFFVGFTPEGGANLPTASVYISFVTRL
+YLAFGVAMVLPVLLVGLNMLGILPGRTIVHHWRITVFVIMLIAAIAAPGADAISMFYMAI
+PLVVLFGVAIVLCLWGDRRRDRRSGQREVDVEAELAEGPKPLDQI
+>2_1571
+MTSVDEEAAGARGRRKGRKPKNPNGEMPLREHLKELRDRLIKSVLAVVLGAVAGFALYKP
+VMEVLTRPMVEARERGVNAALAFDTVSSPFDMMLKVALFIGIVVSSPVWLYQAWAFVVPG
+LTKSEKKYAVGFLGTAIPLFLAGLYLAWLVHPQAVQFFIGFTFDGTAALPTASNFLTFSI
+TLFLVFGVSMVLPVFLVGLNLLGVLPATTILKHWRIVVFLVALIAAMAAPGSDVISMFYL
+AGPLLLLFGISILVCWLNDRRRARRSRDTAEDLEAEIAAGPRSLDEL
+>3_866
+MTEVDEVARRTRRRRKRRDNPTGEMPLREHLTELRNRLLKSGLAVAVGMVVGFLVYQPVM
+AELFRPVKEIASQGHTAAVAYDTVASPFDLMLKVSMFIGLILSSPVWLYQIWAFIVPGLK
+KAEKKYALGFIAAAVPLFIFGIALGWLVMPQAVQFFVGFTPEGGANLPTASVYISFVTRL
+YLAFGVAMVLPVLLVGLNMLGILPGRTIVHHWRITVFVIMLIAAIAAPGADAISMFYMAI
+PLVVLFGVAIVLCLWGDRRRDRRQGQREMDVEAELAAGPKPLDQI
+>4_1088
+MTEVDEVARRTRRRRKRRDNPTGEMPLREHLTELRNRLLKSALAVAVGMVIGFLVYQPVM
+AELFRPVKEIASQGHTAAVAYDTVASPFDLMLKVSMFIGLILSSPVWLYQIWAFIVPGLK
+KAEKKYALGFIAAAVPLFIFGIALGWLVMPQAVQFFVGFTPEGGANLPTASVYISFVTRL
+YLAFGVAMVLPVLLVGLNMLGILPGRTIVHHWRITVFVIMLIAAIAAPGADAISMFYMAI
+PLVVLFGVAIVLCLWGDRRRDRRSGQREVDVEAELAEGPKPLDQI
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001177.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001177.fa
new file mode 100644
index 0000000000000000000000000000000000000000..91d499021b56292df17ac83dcfcacd744aa24997
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001177.fa
@@ -0,0 +1,15 @@
+>0_1674
+MAGLQGWQLVIIILLAILLFAAPKLPAMARNLGQSMRIFSSEVKQMRTEDKGAKDGKDAR
+SGSGSTAADEPVEGRVVERDETDVRPRDER
+>1_1137
+MAGLQGWQLVIIILLAILLFAAPKLPAMARNLGQSMRIFSSEVKQMRTEGKGTTDERSGA
+GSTAADEPVEGRVVERDETDPRDPR
+>2_1572
+MRFTPTHLIVLIIVVLLLFAAPKLPALARNLGQSMRIFSSEVKQMKEENTTKKAEGAATA
+DAPSQGAGSTAAEPVEGRVVDRDVRDDR
+>3_865
+MAGLQGWQLVIIILLAILLFAAPKLPAMARNLGQSMRIFSSEVKQMRTEGKGTTDERSGA
+GSTAADEPVEGRVVERDETDPRDPR
+>4_1087
+MAGLQGWQLVIIILLAILLFAAPKLPAMARNLGQSMRIFSSEVKQMRTEGKGTTDERSGA
+GSTAADEPVEGRVVERDETDPRDPR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001178.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001178.fa
new file mode 100644
index 0000000000000000000000000000000000000000..57eeef0a568d534166039f786864158736de191f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001178.fa
@@ -0,0 +1,65 @@
+>0_1675
+MAPPASRRAGDEAAERIISLLWLLLSAPHGLERDRIRRQVVGYEGLSDAAFEKLFQRDRR
+VLRAVGVPLETLEADSFEEEAQGVRHRVVRDAMLLRDLDLTVDERRALVRARRLWGDSPL
+RADVVRAVGLLFAPTPDLAADDELAGYHALTPRADPRLEALTQAVAEEAVLRFPYRDARG
+RESRRTVRAWFLTLVRGRWYLTGWDADREAERSFRLTRMEGEPRRVERAASLPGRPADHD
+HADLVARLAGQADAERVRVWLAPGRGQGVRAVGARVDPRAEDGAAPGDGWELWEAPAGTH
+EDGLAAEVGGLLGRAVPSAAEPDLARRVADALAAAARAHAGPAAPALLEAPLAPPVRRRA
+RDSSEDLVGRLLDIVGLANRADGVDRAELRARLGVTEERLDADLETLRYCGMPERDFPGF
+QFEVDEEGGRVHVRRAADLAGPVRLTRPEGHSLVAALQTVADLPVLDDADRAAARSAQRR
+IAEAVLDAGGAAASAADDEALAEAEAGTAPTPAPGGAVAAHWDVAVDPETVRTLLAAIAE
+RRVLRLDYRSVHADALSERDVEPLAVVQDGARLYLRAWCRSAGEDRVFRVDRIGAATATG
+EAFAPRARPARWRVHPDEAAGTPAVLRWAHRVRDAASGYRPEAQADLPDGDRLTRVRLTD
+ADVAAALVGRHGGAVEVLYPAAMRAHVKDALDRAVDALAAR
+>1_1136
+MTPPAPRRAGDEAAERIISLLWLLLSAPHGLERDRIRRQVVGYEGLTDTAFEKLFQRDRR
+VLRAVGVPLETLEPAGLDEGEAGVRHRVVRDALLLRDLDLTVDERRALVRARRLWGDSPL
+RADVVRAVGLLFQPATDLTGDDELAGYHTLMPRADPRLEALTQAVADEAVLRFPYRDARG
+RATRRTVRAWYLTLVRGRWYLTGWDLDRGAERSFRLTRMEGEPRRVERATDAPGRPEDHD
+HAGLVARLAGQADAERVRVWLAPGRGQGVRAVGEPAEPRVEDGAAPGPDWELWEAPAGPR
+EDGLAAEIGGLLGRAVPSAAHPDLTDRVRAGLAAAAEAHAGPADPALLEVPLAAPVRRRA
+RDSSEDLVGRLLDIVGLANRAGGVDRAELRARLGITDERLDADLETLRYCGMPERDFPGF
+QFEVAEVGGRVHVERAADLAGPVRLTRPEAHSLVAALQTVADLPVLDEADREAARSAQRR
+IRAAVLDAGAPDADDADDAALREAEAHTAGEPPVAVAAHWDVAVDPATVRTLLAAVAERA
+VVHLTYRSVHADALTERDVEPLALVQDGARLYLQAWCRRAEDHRVFRVDRISAPAPTGET
+FAPRARPARWRVHPDDTAGVPVLLRWAHPVRDAAAGYRPDAQADLPDGDRLTRVHLTDAA
+VAAALVGRHGGAVEVLAPADLRTSVADALGDALAALPAR
+>2_1573
+MSAHGSTAEPAERIISLLWLLLHEPLGYTREQIRRLVVGYEGLTDGAFEKLFQRDRRALR
+AVGVPLETVGDPDDEAGPRLRVDRDALLLQDVDFTVDERRALVRARRLWGDSPLRDDVVR
+AVGVLFHPGEVGGDDALEGFRTVMPRTDPRVAALSEAAAEQSVVRFSYRDAAGALTERTV
+RAWLLTLVRGRWYLTGWDADRAAERSFRLTRMESDPVVLDAGAASPAGEAPTLPAGHDHA
+ALRARLAGRAEAETVRVWLAPGRGQGFRVAGRPVPATAADGPAPGPDWELWECPSGPSED
+GAVAEAAVAVGQVLFSTVEAAAGRALAADLAAAAAVHAGDPDPAWRDVPLTAPTRRRSRA
+SSEDLVGRLLDIVGLANRAEGIGRDELQERLGVTARELDADLEVLRYCGMPEREFPGFQF
+DVEDEGGRVRVHQSSELAGPVRLTLPEAHALVAALQTVAEMTVLTPEDREAARSAQRRIR
+ASLADAGQSHAGSADAEAPRDGTGKEPGAVVAHWDVVADPDTVRTLLDAVAERAVVHLRY
+HGVRSDAVTERDVEPLAVVQDRTRLYLQAWCRRAGGPRVFRVDRIGALHRTGETFRARRV
+PAWDPRPAGDGVEAVVRWAHEVRDAADAYAPAAAATLDSGDRLTRVLLADDDAAVGLAAR
+HGGRVEILAPAALRGAVRGRLEAAARRAAGAVA
+>3_864
+MTPPAPRRAGDEAAERIISLLWLLLSAPHGLERDRIRRQVVGYEGLTDAAFEKLFQRDRR
+VLRAVGVPLETLEPAGFDEGEAGVRHRVVRDALLLRDLDLTVDERRALVRARRLWGDSPL
+RADVVRAVGLLFQPATDLTGDDELAGYHTLMPRADPRLEALTQAVADEAVLRFPYRDARG
+RATRRTVRAWFLTLVRGRWYLTGWDLDRAAERSFRLTRMEGEPRRLERATDAPGRPEDHD
+HADLVARLAGQADAERVRVWLAPGRGQGVRAVGEPAEPRVEDGAAPGPDWELWEAPAGPR
+EDGLAAEIGGLLGCAVPSAAHPDLTDRVRAGLAAAAESHAGPADPALLEVALAAPVRRRA
+RDSSEDLVGRLLDIVGLANRAGGVDRAELRARLGITDERLDADLETLRYCGMPERDFPGF
+QFEVAEVGGRVHVERAADLAGPVRLTRPEAHSLVAALQTVADLPVLDEADREAARSAQRR
+IRAAVLDAGAPDADDADDAALREAEAHTAGEPPVAVAAHWDVAVDPATVRTLLAAVAERA
+VVHLTYRSVHADALTERDVEPLALVQDGARLYLQAWCRRAEDHRVFRVDRISAPAPTGET
+FAARARPARWRVHPDDAAGVPVLLRWAHPVRDAAAGYRPDAQADLPDGDRLTRVHLTDAG
+VAAALVGRHGGAVQVLAPADLRASVADALGDALVALPAR
+>4_1086
+MTPPAPRRAGDEAAERIISLLWLLLSAPHGLERDRIRRQVVGYEGLTDAAFEKLFQRDRR
+VLRAVGVPLETLEPAGFDEGEAGVRHRVVRDALLLRDLDLTVDERRALVRARRLWGDSPL
+RADVVRAVGLLFQPATDLTGDDELAGYHTLMPRADPRLEALTQAVADEAVLRFPYRDARG
+RATRRTVRAWFLTLVRGRWYLTGWDLDRGAERSFRLTRMEGEPRRVERATDAPGRPEDHD
+HAGLVARLAGQADAERVRVWLAPGRGQGVRAVGEPAEPRVEDGAAPGPDWELWEAPAGPR
+EDGLAAEIGGLLGRAVPSAAHPDLTDRVRAGLAAAAETHAGPADPALLEVALAAPVRRRA
+RDSSEDLVGRLLDIVGLANRAGGVDRAELRARLGVTDERLDADLETLRYCGMPERDFPGF
+QFEVAEVAGRVHVERAADLAGPVRLTRPEAHSLVAALQTVADLPVLDEADREAARSAQRR
+IRAAVLDAGAPDADDADDAALREAEAHTAGEPPVAVAAHWDVAVDPATVRTLLAAVAERA
+VVHLTYRSVHADALTERDVEPLALVQDGARLYLQAWCRRAEDHRVFRVDRISAPAPTGET
+FAPRARPARWRVHPDDAAGVPVLLRWAHPVRDAAAGYRPDAQADLPDGDRLTRVHLTDAA
+VAAALVGRHGGAVEVLAPADLRTSVADALGDALAALPAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001179.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001179.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c19d357dbdf0fc8f4d9b48d499a1a95b538d6531
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001179.fa
@@ -0,0 +1,20 @@
+>0_1676
+MSFGQRDYDRTKPEIDFPGENPPAELVVEDLIAGSGPAVEAGSRVQVHYVGVAWSTGEEF
+DASWNRGTPLPLTVGVGQVIAGWDQGLLGMQVGGRRRLEIPPHLGYGARGAGSAIGPNET
+LIFVCDLVSVD
+>1_1135
+MSFGQRDYDRTKPEIDFPGETPPTELVVEDLIEGSGPAVEAGSRVQVHYVGVAWSTGEEF
+DASWNRGTPLPLTVGVGQVIAGWDQGLLGMKVGGRRRLEIPPHLGYGARGAGSAIGPNET
+LIFVCDLVSVD
+>2_1574
+MSFGQRDYDRTKPEIDFPGDTPPTELVVEDLIEGSGPAVEPGSRVQVHYVGVAWSTGEEF
+DASWNRGTPLPLTVGIGQVIAGWDQGLLGMKVGGRRRLEIPPHLGYGARGAGSAIGPNET
+LIFVCDLVSVD
+>3_863
+MSFGQRDYDRTKPEIDFPGETPPTELVVEDLIEGSGPAVEAGSRVQVHYVGVAWSTGEEF
+DASWNRGTPLPLTVGVGQVIAGWDQGLLGMKVGGRRRLEIPPHLGYGARGAGSAIGPNET
+LIFVCDLVSVD
+>4_1085
+MSFGQRDYDRTKPEIDFPGETPPTELVVEDLIEGSGPAVEAGSRVQVHYVGVAWSTGEEF
+DASWNRGTPLPLTVGVGQVIAGWDQGLLGMKVGGRRRLEIPPHLGYGARGAGSAIGPNET
+LIFVCDLVSVD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001180.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001180.fa
new file mode 100644
index 0000000000000000000000000000000000000000..749bd27b04ddc598408436cdec342a8c4ce5284f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001180.fa
@@ -0,0 +1,45 @@
+>0_1679
+MTDADRARRIFGLETEYGVQHWNPEGRPLSPEEVVRYLFRPVVEWGHSSNVFVSNGSRLY
+LDVGSHPEYATAECSTLDELIASDAAGDLILHDLVTRAQERMAADGISGRIHLYRNNADS
+SGSSYGSHENYLLRRRTEYRRLTEALVPFLVSRQILVGAGRVVPAGTWPEGDGAAHFAFS
+QRADFVQDGVSSSTTRSRPIINTRDEPHADASEYRRLHVIVGDTSLSEHTHLLRFGATDL
+MLRMIEAGFPLGDRVLAHPTLAVRQISHDLTGTARVALRDGDASALELQEHYLERARAFV
+AAEGAHHERVEEILTLWEDVLEAVRTGDRSRIEDRIDWAIKLRMLEDYRARQNLDWGSAR
+LAQLDLAFHDIDPDRGLFRLLLRRGAAARLLPEDAGRLAVDAAPPTTRARVRADFIARAR
+QRGLGYAVDWTTLKLTDHPLHAIAAKDPFDASSDAVDRLFERIG
+>1_1133
+MTDADRARRIFGLETEYGVQHWNPEGRALSPEEVVRYLFRPVVEWGRSSNVFVANGSRLY
+LDVGSHPEYATAECSTLDELIASDGAGDLLLHDLVVQAEERMATDGVGGRIHLYRNNADS
+SGSSYGSHENYLLRRRTEYRRLTEALVPFLVSRQILVGAGRVVPAGTWPEGEGPAHFAFS
+QRADFVQDGVSSSTTRSRPIINTRDEPHADASEYRRLHVIVGDTNLSEHTHLLRFGATDL
+LLRMIEAGFPLGDRVVAHPTRAVRQISHDLTGTARIALREGEASALELQEHYLERARTFV
+AAEGAHHDRVGEVLTLWGEVLDAVRTGDRSRIEDRIDWAIKLRLLEDYRARHDLGWDAPR
+LAQLDLAFHDIDPDRGLFRLLLRRGAVARLLPEDAARSAVETAPPTTRARVRADFVARAR
+ERGLDYAVDWTTLKLTDHPLHAIVTKDPFDTSSAAVDRLFGRIA
+>2_1576
+MTTDARRIFGLETEYGVQHWNPQARPLSPEEVVRYLFRPVLEWGRSSNVFVRNGSRLYLD
+VGSHPEYATAECSTLDELIASDAAGDLMLLDLIARAEEAMAADGIGGRIYLYRNNADSSG
+SSYGSHENYLLRRRTEYRRLTEALVPFLVSRQILVGAGRVIPAGVWPEGEGRAHFAFSQR
+ADFVQEGVSSSTTRSRPIINTRDEPHADASEYRRLHVIVGDTNLSEATTLLRFGATDLML
+RMIEAGYPLGDHRVAHPTLAIRQISHDLTGTVRVNLREGTASALDLQDHYLSRARAFVAS
+EGAHHDRVEDVLDLWGTVVDAVRSQDFGPIEETIDWAIKLKLLRGYRDRYGLDWDAPRLA
+QLDLAFHDIAPGRGLFPLLRERGGVRRVLPEGAARAAVDAAPPSTRATVRAEFIARARAA
+GMDYAVDWTTLKLNDHPIHAISTKDPFSTDATPVDRLFERVG
+>3_861
+MTDADRARRIFGLETEYGVQHWNPQGRPLSPEEVVRYLFRPVVEWGRSSNVFVANGSRLY
+LDVGSHPEYATAECSTLDELIASDGAGDLLLHDLVVQAEERMAADGVGGRIHLYRNNADS
+SGSSYGSHENYLLRRRTEYRRLTEALVPFLVSRQILVGAGRVVPAGTWPEGEGPAHFAFS
+QRADFVQDGVSSSTTRSRPIINTRDEPHADASEYRRLHVIVGDTNLSEHTHLLRFGATDL
+LLRMIEAGFPLGDRVVAHPTRAVRQISHDLTGTARIALREGEASALELQEHYLERARAFV
+AAEGAHHDRVGEVLTLWGEVLDAVRTGDRSRIEDRIDWAIKLRLLEDYRARHDLGWDAPR
+LAQLDLAFHDIDPDRGLFRLLLRRGAVARLLPEDAARSAVEAAPPTTRARVRADFVSRAR
+ERGLDYAVDWTTLKLTDHPLHAIVTKDPFDTSSAAVDRLFERIA
+>4_1083
+MTDADRARRILGLETEYGVQHWNPQGRPLSPEEVVRYLFRPVVEWGRSSNVFVANGSRLY
+LDVGSHPEYATAECSTLDELIASDGAGDLLLHDLVVQAEERMAADGVGGRIHLYRNNADS
+SGSSYGSHENYLLRRRTEYRRLTEALVPFLVSRQILVGAGRVVPAGTWPEGEGPAHFAFS
+QRADFVQDGVSSSTTRSRPIINTRDEPHADASEYRRLHVIVGDTNLSEHTHLLRFGATDL
+LLRMIEAGFPLGDRVVAHPTRAVRQISHDLTGTARIALREGEASALELQEHYLERARAFV
+AAEGAHHDRVGEVLTLWGEVLDAVRTGDRSRIEDRIDWAIKLRLLEDYRARHDLGWDAPR
+LAQLDLAFHDIDPDRGLFRLLLRRGAVARLLPEDAARSAVETAPPTTRARVRADFVARAR
+ERGLDYAVDWTTLKLTDHPLHAIVTKDPFDTSSAAVDRLFERIA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001182.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001182.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8e98e4f494ef7fff933379b63b896cdc1731118f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001182.fa
@@ -0,0 +1,20 @@
+>0_1681
+MRLWTLHPRHLDRQGLTGAWREALLAQAVLAGRTRGYRDHPQLLRFREHPDPSGAVGAFL
+SGLEAEATARGYRFDHSRIDRPCPAPDGAVRIPTVGLAPIPATTGQRDLEWRHLCAKLAA
+RSPAWLERWADTPVPDVHPLFTIVPGPVASWERA
+>1_1131
+MRLWTLHPRHLDRQGLTGAWREALLAQAVLAGRTRGYRDHPQLLRFREHPDPSGAIGAFL
+SGLEAEATARGYRFDHSRIDRPCPAPDGAVRIPPAGLAPIPATTGQRDLEWRHLCAKLAA
+RSPAWLERWSDTPVPDVHPLFTIVPGPVASWERA
+>2_1578
+MRLWTLHPRHLDRQGLTGGWREALLAQAVLARRTKGYRDHPQLERFRGHGDPAAAIGAFL
+SGIALEASARGYRFDVSKIDRPLLPADGAGELVLPFRIAPIEVTTGQVAHEWGHLRAKLA
+ARSPGWLERWADVQTPDVHPLFEVVDGPIASWERP
+>3_859
+MRLWTLHPRHLDRQGLTGAWREALLAQAVLAGRTRGYRDHPQLLRFREHPDPSGAIGAFL
+SGLEAEATARGYRFDHSRIDRPCPAPDGAVRIPPAGLAPIPATTGQRDLEWRHLCAKLAA
+RSPAWLERWSDTPVPDVHPLFTIVPGPVASWERA
+>4_1081
+MRLWTLHPRHLDRQGLTGAWREALLAQAVLAGRTRGYRDHPQLLRFREHPDPSGAVGAFL
+SGLEAEATARGYRFDHSRIDRPCPAPDGAVRIPPAGLAPIPATTGQRDLEWRHLCAKLAA
+RSPAWLEQWSDTPVPDVHPLFTIVPGPVASWERA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001184.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001184.fa
new file mode 100644
index 0000000000000000000000000000000000000000..784053356803ce6e08fac64e7d38487dc4ea613f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001184.fa
@@ -0,0 +1,55 @@
+>0_1683
+MSAFGRGTADGFARAVAVDVGPTPAFEGQRRLFHGAAVPPNGRDAAGWGVHRVMGTETEF
+GIHAPANPGAHHSVLSVELVNAYADLVTRSGSAVAGTEWDYTGESPLVDARGWRLPRSAA
+HPSQLTDEALVGPDGEPVHLLLSTVLANGARWYVDHAHPEYSSPETTTPRDAMVWDAAGD
+LVAQAAAEHIGQAEGAPEVLVYKNNVDGKGQSYGAHENYLVARSLDFDELTAVLLPFFAA
+RQVLVGAGRVGLGPAGERPGFQLSQRADYFEEPVGLETTIHRPIVNTRDEPHARPEAYRR
+LHVIIGDATLSQHATWLRMGMTALVLALAEAGTAPRLVLDDPVAALQTISHDPGLRATVP
+LLEHTADGPVRRHWTGLQILRSYLDAAHAHCAAFGVTDPQTREVLEAWAIDLDDATADPL
+SLSDRADWAAKLRVLEGLRARAGADWTDPRLAMVDLQYADLRPARSLHRRLVAAGALRTL
+ADEAEIRAAVATPPRATRAWTRGNLVGRHGDRVAGAAWETLLLRGAGERVHRLHLAEPLV
+GAAVDLPGWWEDAAAPRPDDEALVATLPPLFGARA
+>1_1129
+MSAFGRGAADGFARAAAVDVGPTPAFEGQRRLFHGAAVPPNGRDAAGWGVHRVMGTETEF
+GIHAPANPGAHHSVLSVELVNAYADLVTRSGSAVAGTEWDYTGESPLVDARGWRLPRSAA
+HPSQLTDEALVGPDGEPVHLLLSTVLANGARWYVDHAHPEYSSPETTTPRDAMVWDAAGD
+LVAQAAAEHIGQAEGAPEVLVYKNNVDGKGQSYGAHENYLVARSLDFEELTAVLLPFFAA
+RQVLVGAGRVGLGPAGERPGFQLSQRADYFEEPVGLETTIHRPIVNTRDEPHARPEAYRR
+LHVIIGDATLSQHATWLRMGMTALVLAMAEAGTAPRLTLDDPVAALQTISHDPGLRATVP
+LLERTADGPVRRHWTGLQILRSYLDAARAHCAAFGVTDPQTREVLEAWAIDLDDATADPL
+SLSDRADWAAKLRVLEGLRARTGADWTDPRLAMVDLQYADLRPARSLHRRLVAAGALRTL
+ADEAEIRAAVATPPRATRAWTRGNLVGRHGDRVAGAAWETLLLRGAGERVHRLHLAEPLV
+GAAVDLPGWWEDAAAPRPDDEALVATLAPLFGARA
+>2_1580
+MPGGIGGAPEAVAGTPAFAGQRRLFPADLTAPPGGRDAAGWGVHRVMGTESEFGIHAPAN
+PGAHHSVLSVELVNSYADLITHSGGAVAGTEWDYAGESPLVDARGWRMPRSAAHPSQLTD
+QALVGPDGEPVHLLLSTVLPNGARWYVDHAHPEYSSPEVASPREAVVWDAAGDRVAQAAA
+EHIAAAEGAPEVLVYKNNTDGKGQSYGSHENYLVARALPFDELAEVLLPFFAARQVLVGA
+GRVGVGLRGERPGFQLSQRADFFEEQVGLETTIRRPIVNTRDEPHARGDAYRRLHVIIGD
+ANLSQHATWLRMGMTALVLALAEAGTAPRIVLDDPVAALQTISHDPTLRAAVPGRERGAD
+GVWTRREWTGLQILGAYLDAAREHCARCGVDDAETAAVLDAWGTDLADAAADPLALADRA
+DWAAKLRVLEGLRARGGLDWSDPRLAMVDLQYADLRPAKSLHRRLVAAGAMRVLVEDAEV
+EAAVVAPPRSTRAWTRGNLVRHHARQVSGAAWDSVLVRAAEEAPLHRLRLEEPLVGAAED
+LPGWWDDTPGSAAPAPEPNELVTRLGELLRR
+>3_857
+MSAFGRGAADGFARVAAVDVGPTPAFEGQRRLFHGAAVPPNGRDAAGWGVHRVMGTETEF
+GIHAPANPGAHHSVLSVELVNAYADLVTRSGSAVAGTEWDYTGESPLVDARGWRLPRSAA
+HPSQLTDEALVGPDGEPVHLLLSTVLANGARWYVDHAHPEYSSPETTTPRDAMVWDAAGD
+LVAQAAAEHIGQAEGAPEVLVYKNNVDGKGQSYGAHENYLVARSLDFEELTAVLLPFFAA
+RQVLVGAGRVGLGPAGERPGFQLSQRADYFEEPVGLETTIHRPIVNTRDEPHARPEAYRR
+LHVIIGDATLSQHATWLRMGMTALVLAMAEAGTAPRLTLDDPVAALQTISHDPGLRATVP
+LLERTADGPVRRHWTGLQILRSYLDAARAHCAAFGVTDPQTREVLEAWAIDLDDATADPL
+SLSDRADWAAKLRVLEGLRARTGADWTDPRLAMVDLQYADLRPARSLHRRLVAAGALRTL
+ADEAEIRAAVATPPRATRAWTRGNLVGRHGDRVAGAAWETLLLRGAGERVHRLHLAEPLV
+GAAVDLPGWWEDAAAPRPDDEALVATLPPLFGARA
+>4_1079
+MSAFGRGAADGFARAVDVGPTPAFEGQRRLFHGAAVPPNGRDAAGWGVHRVMGTETEFGI
+HAPANPGAHHSVLSVELVNAYADLATRSGSAVAGTEWDYTGESPLVDARGWRLPRSAAHP
+SQLTDEALVGPDGEPVHLLLSTVLANGARWYVDHAHPEYSSPETTTPRDAMVWDAAGDLV
+AQAAAEHIGQAEGAPEVLVYKNNVDGKGQSYGAHENYLVARSLDFEELTAVLLPFFAARQ
+VLVGAGRVGLGPAGERPGFQLSQRADYFEEPVGLETTIHRPIVNTRDEPHARPEAYRRLH
+VIIGDATLSQHATWLRMGMTALVLAMAEAGTAPRLTLDDPVAALQTISHDPGLRATVPLL
+ERTADGPVRRHWTGLQILRSYLDAARAHCAAFGAADPQTREVLDAWAVDLDDATADPLSL
+SDRADWAAKLRVLEGLRARTGADWTDPRLAMVDLQYADLRPARSLHRRLVAAGALRTLAD
+EAEIRAAVATPPRATRAWTRGNLVGRHGDRVAGAAWETLLLRGAGERVHRLHLAEPLVGA
+AVDLPGWWEDAAAPRPDDEALVATLAPLFGARA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001190.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001190.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6a51f4cdcf0c80f66db006e523bf6d4d04728a2d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001190.fa
@@ -0,0 +1,45 @@
+>0_1689
+MKSWSTPVPPAVPTRPDRLRLHDTATGAVRHPGNDAREASLYVCGITPYDATHLGHASTY
+VAFDLLNRYWRAAGLEVAYVQNVTDVDDPLLERADATGVDWRELARDQTDLFRTDMAALE
+VLAPDHYVGATEAIDLVVDAVEAMLAAGLAYRVPGDADAPDGDVYFDVRAAEAAGDWRLG
+QVSAMPLDEMAAVFPERGGDPQRPGKRDPLDPLLWRVHRDGEPAWDGRSLGEGRPGWHIE
+CSVISRAHLPSPFTVQGGGSDLRFPHHEFSAAHATAVDGRPLARHYAHTGMVALNGQKMS
+KSLGNLELVSRLRARGVEPVAVRAAILAHHYRSDWEWSEDVLARAQERVARWRAALEGPH
+AQAGSAVLDAVHAALSDDLDAPRALEALDAWAAGTLPGLDAAADAAPVAVADVASALLGL
+RLR
+>1_1123
+MKSWSTPAPPAVPSRPDRLRLHDTATGRTRHPGNDAQRASLYVCGITPYDATHLGHASTY
+VAFDLLHRYWRAAGLEVAYVQNVTDVDDPLLERAEATGVDWRALAEEQTDLFRADMAALE
+VLAPDHYVGATEAVGLVVDAVETMLAAGRAYRVPGGDGEPDGDVYFDVRAAQSATDWRLG
+QVSAMGLDEMAAVFPERGGDPDRPGKRDPLDPLLWRVHREGEPAWDGRSLGSGRPGWHIE
+CSVISRAHLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGLPLAHTYAHTGMVALDGEKMS
+KSLGNLELVSRLRARGVEPVAVRAAILAHHYRSDWEWSEQVLADAQARVARWRAALDGPH
+AAAGVAVLDAVHAALSDDLDAPRALEALDAWAAGTLPGLAEAAADPLPVVDVVAALLGLR
+LR
+>2_1586
+MKSWSTPAPRALPVQPDRLRVFDTATQALRHPGNDARTASLYVCGITPYDATHLGHATTY
+VSFDLLQRYWRAAGLEVAYTQNVTDVDDPLLERAEATGVDWRELAREQTDLFRSDMEALN
+VFAPDHYVGATEAIDLVVRAVEAMLEGGTAYRVPGTDGEPDGDVYFDSAAAQARGGWTLG
+SVSAMDRAQMEEVFPERGGDPGRPGKRDPLDPLLWRVHREGEPAWDGGALGSGRPGWHIE
+CSAIAREHLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGRPLAHTFLHSGMVALDGQKMS
+KSLGNLELVSRLRARGVEPVAIRAAILDRHYRSDWEWSEDLLTAAEERVARWRSALDGPH
+ADAGAAVLAAAHTALSEDLDAPAALRVLDAWADGTLDGLSTTAEPLPVADVVDALLGLRL
+R
+>3_851
+MKSWSTPAPPTVPSRPDRLRLHDTATGRTRHPGNDAQRASLYVCGITPYDATHLGHASTY
+VAFDLLHRYWRAAGLEVAYVQNVTDVDDPLLERAEATGVDWRALAEEQTDLFRADMAALE
+VLAPDHYVGATEAVGLVVDAVETMLAAGRAYRVPGGDGEPDGDVYFDVRAAQSATDWRLG
+QVSAMGLDEMAAVFPERGGDPDRPGKRDPLDPLLWRVHREGEPAWDGRSLGSGRPGWHIE
+CSVISRAHLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGLPLAHTYAHTGMVALDGEKMS
+KSLGNLELVSRLRARGIEPVAVRAAILAHHYRSDWEWSEQVLADAQARVARWRAALDGPH
+AAAGVAVLDAVHAALSDDLDAPLALEALDAWAAGTLPGLAEAAADPVPVVDVVAALLGLR
+LR
+>4_1073
+MKSWSTPAPPAVPSRPDRLRLHDTATGRTRHPGNDAQRASLYVCGITPYDATHLGHASTY
+VAFDLLHRYWRAAGLEVAYVQNVTDVDDPLLERAEATGVDWRALAEEQTDLFRADMAALE
+VLAPDHYVGATEAVGLVVDAVETMLAAGRAYRVPGGDGEPDGDVYFDVRAAQSATDWRLG
+QVSAMGLDEMAAVFPERGGDPDRPGKRDPLDPLLWRVHREGEPAWDGRSLGSGRPGWHIE
+CSVISRAHLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGLPLAHTYAHTGMVALDGEKMS
+KSLGNLELVSRLRARGVEPVAVRAAILAHHYRSDWEWSEQVLADAQARVARWRAALDGPH
+AAAGVAVLDAVHAALSDDLDAPRALEALDAWAAGTLPGLAEAAADPLPVVDVVAALLGLR
+LR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001192.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001192.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1eb096a2cfe225f840af7e3c689371ebdc9211a5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001192.fa
@@ -0,0 +1,15 @@
+>0_1691
+MSSDARMALEALTTALNEHLVAAQNKRGEDDPAVEAAFFAVADAFEAYEDALYADTEEVT
+PLEVFDDEEDDEA
+>1_1121
+MSSDARMALEALTTALNEHLVAAQNKRGEDDPAVEAAFFAVADAFEAYEDALYADTEEVT
+PLDLFDDEDDDD
+>2_1588
+MSSDARVALEALTSALNEHLVAAQNRRGEDDPAVEAAFFAVADAFDAYEEALYAETEEVT
+PLELFDDEDDLDEED
+>3_849
+MSSDARMALEALTTALNEHLVAAQNKRGEDDPAVEAAFFAVADAFEAYEDALYADTEEVT
+PLDLFDDEDDDD
+>4_1071
+MSSDARMALEALTTALNEHLVAAQNKRGEDDPAVEAAFFAVADAFEAYEDALYADTEEVT
+PLDLFDDEDDDD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001196.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001196.fa
new file mode 100644
index 0000000000000000000000000000000000000000..be30db5ac6e13be8cc910368d46518b162ea31f0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001196.fa
@@ -0,0 +1,31 @@
+>0_1696
+MRTTELAAPPSLAGLYARAAGQAAKDALTRRSRPAVLPEREVVVTGHRIPRAAVAAWRDA
+VGPADPAALPSVLVHTQVFGAAMELMADPEFPLPLPGMVHLTNTVLHRRPVPAETALRVT
+ARAVGLVPHHAGTAVDVAVTVEGPHPAGGEAVLWEGVSRYLAKGVHLTGLRPERPAREEF
+TAPARTAEWRLGAGAGRRYADVSGDWNPIHLTGVSARLFGMKGAIAHGMLLAARMLQGRE
+PAAGGFRWEIEFDAPVVLPGTVAVRYEPADGQGTRVIGWDGRRCRRHFTGRIAPLAD
+>1_1117
+MQTTQLSAPPSLGRLYVRAAGRAATDAVVRRRRPRELPDRQVVVTGHRIPAEAVTAWRGA
+VGSANPADLPSVLVHTQVFGAAMELMADPEFPLPLPGLVHLSNTVLHHRPVAAETALRVT
+ARAVGLVPHHAGTAVDVVVTVEGPGDDGEEALLWEGVSRYLAKGVHLSGLRPERPARPDF
+VPPTPTAQWRFGTGAGRRYAGVSGDWNPIHLTGVSARLFGMKGAIAHGMFLAARMLEGRE
+PAGAGFRWHIDFEAPVVLPTTVAVRYEPGPDGGTRVWGWDARRRRPHFSGEITPLEP
+>2_1592
+MHTRTESSMPALAGLYRRAAGQALADAARRRTRPAELPDERLVVEGHRIPERALRRWQAE
+IGPVDPASVPSVLVHTQVFGAAMALMAEPDFPLPLPGMVHLTNAVEHRRPVAAGEALDVT
+ARAVGLVPHHAGTAVDLQVAVREAGETDDAPAAWEGVSRYLARGVHLAPLRPERPERPEF
+TPPAPTAQWMFDGGAGRRYAEVSGDWNPIHLSALSARAFGQRRAIAHGMLLAARMLNRRE
+PRAAAFGEGFGWDVEFHAPVVLPARVAVRYEAAADGSTRVSAWDPRRGRPHLDGRIRHAR
+P
+>3_845
+MQTTQLSAPPSLARLYARAARQAATDAVVRRRRPRELPDRQVVVTGHRIPAEAVSAWRGA
+VGSADPADLPSVLVHTQVFGAAMELMADPEFPLPLPGLVHLSNTVLHHRPVAAETPLRVT
+ARAVGLVPHHAGTAVDVVVTVEGPGDDGEEALLWEGVSRYLAKGVHLSGLRPERPARPDF
+VPPTPTAQWRFGTGAGRRYAGVSGDWNPIHLTGVSARLFGMKGAIAHGMFLAARMLEGRE
+PAGAGFRWHIDFEAPVVLPTTVAVRYEPGPDGGTRVWGWDARRRRPHFSGEITPLEP
+>4_1067
+MQTTQLSAPPSLGRLYVRAAGRAATDAVVRRRRPRELPDRQVVVTGHRIPAEAVTAWRGA
+VGSADPADLPSVLVHTQVFGAAMELMADPEFPLPLPGLVHLSNTVLHHRPVPAETALRVT
+ARAVGLVPHHAGTAVDVVVTVEGPGDDGGEALLWEGVSRYLAKGVHLSGLRPERPARPDF
+VPPTPTAQWRFGTGAGRRYAGVSGDWNPIHLTGVSARLFGMKGAIAHGMFLAARMLEGRE
+PAGAGFRWHIDFEAPVVLPTTVAVRYEPGPDGGTRVYGWDARRRRPHFSGEITPLES
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001203.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001203.fa
new file mode 100644
index 0000000000000000000000000000000000000000..72c2b02a8d53b1f59b871e4a2045b31e4679daa4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001203.fa
@@ -0,0 +1,35 @@
+>0_1705
+MTTHHGEYKVIGGKLVAADLTIDDGRIAAASINGDFFLEPDEALEDLNAAVTGLSADAEH
+RVIQAAVEAGLREDAELFGVDAHAIATAVRRALGKATTWEDHEWEIIPPEPLPIALTVAL
+DEVLTRQVAEGRRRPTMRLWQWNEPAVVIGAFQSLANEVDPEGASRHGINVVRRISGGGA
+MFMEADNCVTYSLHVPRSLVDGLETAESYPFLDEWTMDALSRLGVQAFYQPLNDIATDQG
+KIGGAAQKRVGQDGLLHHVTMSYDIDADKMLEVLRIGREKLKGKGVASAKKRVDPLRRQT
+GVARPEIWETMMATFEERYGARRVELDDATRAEAEELARTKFGTQEWTARVP
+>1_1108
+MTTLHGEYKVIGGKLVAADLSLADGRIATASINGDFYLEPDEALEDLNAAVAGLSADAEH
+RVIREAVERGLRPEAELFGVDAFAVASAVRRALGKATTWGDHEWEVIGPEPMPIALTVAL
+DEVLTRQVAEGRRKPTMRLWQWNEPAVVIGAFQSLANEVDPEGARRHGINVVRRISGGGA
+MFMEADNCVTYSMHVPSSLVDGLETAESYPFLDEWTMDALSRLGVHAFYQPLNDIATDQG
+KIGGAAQKRVGTAGLLHHVTMSYDIDADKMLEVLRIGREKLRGKGVTSAKKRVDPLRRQT
+GVSRAEIWETMMTTFEERYGARRVELDEATREEAEQLARTKFATPEWTARVP
+>2_1600
+MSTQTTHHGEFKVLGGKLVAADLEVQDGVIVRASVNGDFFLEPDDALEDINAALTGLPAD
+TEHHVLAERVRAGLRPEARLFGFDAEAVATAVRRAVGLATTWESHRWEILPPEPLPIEMN
+TALDQILTEDVAAGRRNPVMRLWQWTEPAVVIGAFQSLANEVDPDGVTRHGIHVVRRVSG
+GGAMFMEADNCVTFALSAPASLVDGIDTAESYPFLDEWVMEALRELGVQAFYQPLNDIAT
+DQGKIGGAAQKRFGATGLLHHVTMSYDIDADKMTEVLRIGREKLRGKGVASAKKRVDPLR
+RQTGVPREQIWETMMAVFERRYGARRVELDADTRARAEELARTKFSSPEWTARVP
+>3_836
+MTTLHGEYKVIGGKLVAADLSLADGRIATASINGDFYLEPDEALEDLNAAVAGLSADAEH
+RVIREAVERGLRPEAELFGVDAFAVASAVRRALGKATTWGDHEWEVIGPEPMPIALTVAL
+DEVLTRQVAEGRRKPTMRLWQWNEPAVVIGAFQSLANEVDPEGARRHGINVVRRISGGGA
+MFMEADNCVTYSMHVPSSLVDGLETAESYPFLDEWTMDALSRLGVHAFYQPLNDIATDQG
+KIGGAAQKRVGTAGLLHHVTMSYDIDADKMLEVLRIGREKLRGKGVTSAKKRVDPLRRQT
+GVSRAEIWETMMTTFEERYGARRVELDEATREEAEQLARTKFATPEWTARVP
+>4_1058
+MTTLHGEYKVIGGKLVAADLSLADGRIATASINGDFYLEPDEALEDLNAAVAGLSADAEH
+RVIREAVERGLRPEAELFGVDAFAVASAVRRALGKATTWGDHEWEVIGPEPMPIALTVAL
+DEVLTRQVAEGRRKPTMRLWQWNEPAVVIGAFQSLANEVDPEGARRHGINVVRRISGGGA
+MFMEADNCVTYSMHVPSSLVDGLETAESYPFLDEWTMDALSRLGVHAFYQPLNDIATDQG
+KIGGAAQKRVGTAGLLHHVTMSYDIDADKMLEVLRIGREKLRGKGVTSAKKRVDPLRRQT
+GVSRAEIWETMMTTFEERYGARRVELDEATREEAEQLARTKFATPEWTARVP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001205.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001205.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f2acdd7d197f6f10c7915cdf451b76c3f6be5595
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001205.fa
@@ -0,0 +1,30 @@
+>0_1710
+MIDVLGADVLGLELWQVVLVLLAGFWAGTINSVIGSGTLVTFPTLVAVGFPPVTAQISNA
+IGLVAAGFSGVFGYRRELKESGAVLPVLTVASLLGGVLGAFLLILLPAEVFGVAAPVLIV
+VALAFVVLQPRLQAWVRRRSAAREDGVVDVPARPSRPVSPVLWVLVFLAGVYGGYFVAAQ
+GVLLMGILGVFLVGGTLVHANAIKTWLSLAVNLVAATSYLLFAFDRIDWTAVLLIAASSM
+VGGLVGARIGRRISPTVLRIVIVVVGLAGLVSMVLRLVDGG
+>1_1105
+MTGLLTAQLLGMDLWQVLLVLLAGFWAGTINSVIGSGTLVTFPTLVAVGFPPVTAQVSNA
+MGLVASGFSGTYGYRRELAQSRALLPKLTVASLLGGVIGAALLTTLPPAVFGYVAPVLLV
+VALTVVVLQPRIQGWVRRRAEDQGPTPGADSPVPVGPVTPTLWTLVFLTGIYGGYFVAAQ
+GVMLMAIFGVLLVGGTLVHANAVKTWLSLVVNLTAAAFYLVFAFDRIDWRAVLLIALSSL
+VGGLVGARIGRRISPTALRVTIVIVGLAGLVVMVMRQVSGG
+>2_1603
+MDLLTAPVLGMDLWQVALVLLAGFWAGTINSIIGSGTLVTFPVLVAVGFPPVTAQVSNAM
+GLVASGFSGTYGYRRELRESRALLPRLTLASFLGAVIGATLLTVLPPTVFASVAPCLLVL
+ALTIVVLQPRIQAWVRRRSAGEHGHVPGADSPVPVGPASPALWTLVFLTGIYGGYFVAAQ
+GVMLMAIFGVMLVGGTLVHANAVKTWLSLTVNLTAAVFYLVFAFDRIDWRAVLLIAVSSL
+VGGSVGARIGRRMSPTALRVTIVVIGVAGLVSMLSRLAGA
+>3_833
+MTGLLTAQLLGMDLWQVLLVLLAGFWAGTINSVIGSGTLVTFPTLVAVGFPPVTAQVSNA
+MGLVASGFSGTYGYRRELAQSRALLPKLTVASLLGGVIGAALLTTLPPAVFGYVAPVLLV
+VALTVVVLQPRIQRWVRRRAEDQGPTPGADSPVPVGPVTPTLWTLVFLTGIYGGYFVAAQ
+GVMLMAIFGVLLVGGTLVHANAVKTWLSLVVNLTAAAFYLVFAFDRIDWRAVLLIALSSL
+VGGLVGARIGRRISPTALRVTIVIVGLAGLVVMVMRQVSGG
+>4_1055
+MTGLLTAQLLGMDLWQVLLVLLAGFWAGTINSVIGSGTLVTFPTLVAVGFPPVTAQVSNA
+MGLVASGFSGTYGYRRELAQSRALLPKLTVASLLGGVIGAALLTTLPPAVFGYVAPVLLV
+VALTVVVLQPRIQRWVRRRAEDQGPTPGADSPVPVGPVTPTLWTLVFLTGIYGGYFVAAQ
+GVMLMAIFGVLLVGGTLVHANAVKTWLSLVVNLTAAAFYLVFAFDRIDWRAVLLIALSSL
+VGGLVGARIGRRISPTALRVTIVIVGLAGLVVMVMRQVSGG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001210.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001210.fa
new file mode 100644
index 0000000000000000000000000000000000000000..67fb9014091acead0a978f55248bd5beea2c4460
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001210.fa
@@ -0,0 +1,35 @@
+>0_1716
+MTAPAPATGFRRDPGSARPPRLRFDFLATPPWILGFVLCILFAFACHYLAQWQWERRVQV
+QHQVNRVLENYDDAPVPFAQASRMFTDFDAQDEWTPVTLSGEYLAEETLVVRNRPRAGRP
+GYEVLVPFRTDEGPVVVVDRGWLPVGNTPGRPDAVPAPPAGPAEVVVRVKPGEPALDRDA
+PEGQVPSIDLAEIRGHVGGPVADTAYGIMVEEDPAVQDLPQKLVEPTLDEGPHLSYAIQW
+YLFAAMGFGVWGYSAWMRARNDRADALEGVRDDGMLTARRAPRPKPVRRRRDGRPTDEEA
+EDALFD
+>1_1098
+MSIPAPMTDPTARDAERLPALRFGFLATGPWILGFVVCVLFAFLCHALAQWQWDRRVEVQ
+HRVNRVLENYDDDPVPFAEASRLFTAFQTDDEWTPVTLTGEYLVDETLIVRNRPRAGQPG
+YEVLVPFRTDEGPVVVVDRGWLPVGNSPGQPDAVPAPPAGHAEVVVRVKPGEPALDRDAP
+DGQVPSIDLAEIADTVGGPVAGTAYGIMVTEDPAVEPMPQKLVEPTLDEGPHLSYAIQWY
+LFAAMGFGVWGYSAWMRARNDRADALDDAADDGLLSAHRVPRAKPARRRRDGRLTDEEAE
+DALFD
+>2_1610
+MTPAPAPTDTPDAPGAERLPPLRFGFLASGPWILGFVVCILFAFLCHGLAQWQWDRRVQV
+MHDVNRVLANYDDDPVPFAEAPRLFTDFDSEDEWTPVTLTGRYETDETLVVRNRPRAGAP
+GYEVLVPFVTEEGVTVIVDRGWLPIGSQPGRPDAIPAPDPAAGEVVVRVKPGEPALDRDA
+PEGQVPSIDLAAIERILGRPIADTAYGLMVSESPAAATVPNQLVAPTLDEGPHLSYAIQW
+YIFAAMGFAVWGYSAWMKARNDRADALEDAEDDGLLAARRAPRPKARRRRRGGRPSDEEV
+EDALQEDVLRDRPGQASEIRSR
+>3_826
+MSTPAPMSAPTARDAERLPPLRFGFLATGPWILGFVLCILFAFLCHALAQWQWDRRVEVQ
+HRVNRVLENYDDDPVPFAEASRLFTAFQTEDEWTPVTLTGEYLVDETLIVRNRPRAGQPG
+YEVLVPFRTDEGPVVVVDRGWLPVGNSPGQPDAVPAPPAGHAEVVVRVKPGEPALDRDAP
+DGQVPSIDLAEIADTVGGPVAGTAYGIMVTEDPAVESMPQKLVEPTLDEGPHLSYAIQWY
+LFAAMGFGVWGYSAWMRARNDRADALDDAADDGLLSAHRVPRAKPARRRRDGRLTDEEAE
+DALFD
+>4_1048
+MSTPAPMSAPTARDAERLPPLRFGFLATGPWILGFVLCILFAFLCHALAQWQWDRRVEVQ
+HRVNRVLENYDDDPVPFAEASRLFTAFQTEDEWTPVTLTGEYLVDETLIVRNRPRAGQPG
+YEVLVPFRTDEGPVVVVDRGWLPVGNSPGQPDAVPAPPAGHAEVVVRVKPGEPALDRDAP
+DGQVPSIDLAEIADTVGGPVAGTAYGIMVTEDPAVESMPQKLVEPTLDEGPHLSYAIQWY
+LFAAMGFGVWGYSAWMRARNDRADALDDAADDGLLSAHRVPRAKPARRRRDGRLTDEEAE
+DALFD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001212.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001212.fa
new file mode 100644
index 0000000000000000000000000000000000000000..578a0241daa5b472548c9a59ea5b5d7f37c113cb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001212.fa
@@ -0,0 +1,34 @@
+>0_1718
+MGGRGLAIGGGGGLLALLLAIFAPGLAGQLGIDTGGSTGQSQYQQQGAGGTQPVSDEECS
+TGADANRNTDCRVIAATEAADQFWGEYMSQFSDVDWRQPQLTLFAGSVSTGCGSASSAMG
+PFYCPADESMYFDTSFFETLQSDFGAEGGPLAEQYIVAHEYGHHVQHVTGYLQYSRDGST
+GPESGAVRAELQADCLAGMWAGAATTTVDPESGEPYLQPISREQLRQAIDAAAAVGDDRI
+QEMSTGRVNPEAFTHGSSEQRMAWFLRGYETSQQEPDFRQCDTFRASSLDI
+>1_1096
+MSFNENVQIDAGRARSGGGGGLGGRGIAIGGGGGLLALLLAIFAPGLAEQLGIDTGGGSV
+GQSQYQQQTGSGGQSQPLSDEECASGADANQNTDCRVVATTEAADEFWGEYLAQFSDIQW
+RQPQLTLFQGGVSTGCGSASSATGPFYCPADESMYFDTAFFETLQTDFGAEGGPLAEEYI
+VAHEYGHHVQQVTGYLQHSKDGTTGPTSGAVRAELQADCFAGMWAGHATSTVDPESGEPF
+LKPISQDQLRQAIDAASAVGDDRIQSTHTGRVDPEAFTHGTSEQRMAWFMRGYQSAQQEP
+DIRQCDTFRAPSLDI
+>2_1612
+MSFNENVQINAGRARGGGGGGMGGRGLAIGGGGGILALLLAIFAPGLAEDLGIGGAGTGT
+GSSYQQQLPQSGSGTSTQPVSQADCSTGADANQNTDCRVIATTESADAFWGDYMGQYSNI
+QWRQPDLTLFTTSVSTGGCGSATSATGPFYCPADESMYFDTAFFSTLESDFGATGGPLAE
+EYIVAHEYGHHVQNVVGWLQYAQDGRTGAASNAVRSELQADCLAGMWAGHAATTKDPETG
+EAFLQPITQEQLAQAIDAAGAVGDDRIQEQYQGRVNPEAFTHGSASQRQAWFMRGYETTS
+QQSPDINQCNTFQAATLDI
+>3_824
+MSFNENVQIDAGRARSGGGGGLGGRGIAIGGGGGLLALLLAIFAPGLAEQLGIDTGGGSV
+GQSQYQQQTGSGGQSQPLSDEECASGADANQNTDCRVIATTEAADEFWGEYLAQFSDIQW
+RQPQLTLFQGGVSTGCGSASSATGPFYCPADESMYFDTAFFETLQTDFGAEGGPLAEEYI
+VAHEYGHHVQQVTGYLQHSKDGTTGPTSGAVRAELQADCFAGMWAGHAASTVDPESGAPF
+LKPISQDQLRQAIDAASAVGDDRIQSTHTGRVDPEAFTHGTSEQRMAWFMRGYQSSQQEP
+DIRQCDTFRASSLDI
+>4_1046
+MSFNENVQIDAGRARSGGGGGLGGRGIAIGGGGGLLALLLAIFAPGLAEQLGIDTGGGSV
+GQSQYQQQTGSGGQSQPLSDEECASGADANQNTDCRVIATTEAADEFWGEYLAQFSDIQW
+RQPQLTLFQGGVSTGCGSASSATGPFYCPADESMYFDTAFFETLQTDFGAEGGPLAEEYI
+VAHEYGHHVQQVTGYLQHSKDGTTGPTSGAVRAELQADCFAGMWAGHAASTVDPESGAPF
+LKPISQDQLRQAIDAASAVGDDRIQSTHTGRVDPEAFTHGTSEQRMAWFMRGYQSSQQEP
+DIRQCDTFRASSLDI
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001215.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001215.fa
new file mode 100644
index 0000000000000000000000000000000000000000..83e15f79652f064f6f926802c5f53b7b618f4e7c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001215.fa
@@ -0,0 +1,40 @@
+>0_1722
+MTDTVENTQGSMIPGMGEEGEKLTVAQTSAPRAGAPERNAAGSRADRVSSYELADFPVLT
+GREEDWRFTPLKRLGGLHLPEGDDARLTGAAPSVTVAEQVGVRVETVARDDARVGSVLTP
+DDRVSAAAWNSVAQATVVTVSGEVAEPVRIDVVGSSAEPAAMHLTVIVEENAQADVVLAH
+RGTAVLAQNVEFDVRRDARLNVVSLQAWEDDAVHVSAQQASVATNARFKHVAVSHGGSVV
+RLTPTSRFAAERGEAEMYGLYFADAGQHLENRLFVDHNQPRCVSNVLYKGALQGADARTV
+WVGDVLIRKEAEGTDTYEKNQNLLLSDGARADSVPNLEIETGVIEGAGHASATGRFDETQ
+LFYLMARGISETEARRLIVRGFLNEIIQKIGVRDVEDELTAVMEDELRIAAL
+>1_1093
+MTDTVENTQRTMIPGMGEEGEKLTAAQNPAARAGGRERNAAGSRADRLSSFELSDFPVLT
+GREEDWRFTPLKRLGGLHLPEGDDARLTGAAPAVTVAEQAGVTVETVARDDARVGSVLTP
+DDRVSAAAWNSVSEATVVTISGEVAEPVRIDVVGSSADPAAMHLTVLVEENAQADVVIAH
+RGTAVLAQNVEFDVRRDARLNVVALQAWEGDAVHVSAQQASVATNAHFKHVAVSYGGGVV
+RLTPTARFAAERGEAEMYGLYFADAGQHLENRLFVDHNQPDCVSNVLYKGALQGTDARTV
+WVGDVLIRKEAEGTDTYEKNQNLLLSDGARADSVPNLEIETGVIEGAGHASATGRFDETQ
+LFYLMARGISETEARRLIVRGFLNEIIQKIGIGDVEDELTAVMEDELRIAQL
+>2_1615
+MENTERNMIPGMGEEGETLAGGQDAGAPVATRGQGQSRADRVSSKDLADFPVLTGREEDW
+RFTPLERLGGLHLPGGDDARLTGAAPAVTVSETAGVSVETVGRDDARVGSVLTPDDRVSA
+AAWTSFAEATVVTVSGEPGEPVRIEVTGSGVEPAAQQLTLIAEENAHADVVLTHRGSAVL
+AQNVEFEVRRGASLNVVSVQAWDDDAVHVGAHQASVARDAHLKHVTVTHGGSLVRLTPTA
+RFSDERGEAEMYGLYYADAGQHLENRLFVDHNRPNCVSNVLYKGALQGQDAHTVWVGDVL
+IRTEAEGTDSYEKNENLLLTDGARADSVPNLEIETGVIEGAGHASATGRFDETQLFYLMA
+RGIPESEARQLIVRGFLNEILQKIGIADVQDELTAVMEEELRVTAL
+>3_821
+MTDTVENTQRTMIPGMGEEGEKLTAAQNPAARAGGRERNAAGSRADRLSSFELSDFPVLT
+GREEDWRFTPLKRLGGLHLPEGDDARLTGAAPAVTVAEQAGVTVETVARDDARVGSVLTP
+DDRVSAAAWNSVSEATVVTISGEVAEPVRIDVVGSSADPAAMHLTVLVEENAQADVVIAH
+RGTAVLAQNVEFDVRRDARLNVVALQAWEADAVHVSAQQASVATNAHFKHVAVSYGGGVV
+RLTPTARFAAERGEAEMYGLYFADAGQHLENRLFVDHNQPDCVSNVLYKGALQGTDARTV
+WVGDVLIRKEAEGTDTYEKNQNLLLSDGARADSVPNLEIETGVIEGAGHASATGRFDETQ
+LFYLMARGISETEARRLIVRGFLNEIIQKIGIGDVEDELTAVMEDELRIAQL
+>4_1043
+MTDTVENTQRTMIPGMGEEGEKLTVAQNPAARAGGRERNAAGSRADRLSSFELSDFPVLT
+GREEDWRFTPLKRLGGLHLPEGDDARLTGAAPAVAVAEQAGVTVETVARDDARVGSVLTP
+DDRVSAAAWNSVSEATVVTISGEVAEPVRIDVVGSSADPAAMHLTVLVEENAQADVVIAH
+RGTAVLAQNVEFDVRRDARLNVVALQAWEGDAVHVSAQQASVATNAHFKHVAVSYGGGVV
+RLTPTARFAAERGEAEMYGLYFADAGQHLENRLFVDHNQPDCVSNVLYKGALQGTDARTV
+WVGDVLIRKEAEGTDTYEKNQNLLLSDGARADSVPNLEIETGVIEGAGHASATGRFDETQ
+LFYLMARGIPETEARRLIVRGFLNEIIQKIGVGDVEDELTAVMEDELRIAQL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001217.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001217.fa
new file mode 100644
index 0000000000000000000000000000000000000000..da82025e7d8a4d8195634c020e596ff6a03a1c62
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001217.fa
@@ -0,0 +1,25 @@
+>0_1724
+MVYSDLPSHRAAPAPAEGTRERVLQLVLTRGPVSAAEIGRELELTAAAVRRHLDALEEDA
+LVEVKRVTSARGAGRPSRRYVVTSHAQEHLPKDHLAVALHSLARLEELGGDEEVRRTARR
+AFRDVEERFAAAVDGRDTELQERTRILASVLDDAGFAGTLRHFGAGLAPTLRADQVCQGH
+CPFQGIPARHPQFCEEETELFARLLQVDVRRLSTLAAGAHVCTTHVPLGRD
+>1_1091
+MVYSDQSASPPAPAPAEGTRERVLQLVLTRGPVSAAEIGRELELTAAAVRRHLDALEEDS
+LVEVKRVTAARGAGRPSRRYVVTSHAQEHLPKDHLAVALDTLARLEELGGEEEVRRTARH
+AFREIEERFTAAVDGRETALQDRTRILARVLDEAGYAGTLRHFGAGLAPTLRADQVCQGH
+CPFQGIPARHPEFCEEETALFARLLEVDVRRLSTLAAGAHVCTTHVPLGRD
+>2_1617
+MYSDSADPAAPAPGTRERVLERVLSHGPVSAAEIGGALGLTAAAVRRHLDALEEEGFVEV
+KVVSAARGAGRPSRRYVVAPQAQRRLGGDHLGIALQAVDRLVEVGGEGEVRRLAADALQP
+VEEAFQAAVAGREMGLEERTRVLADLLDDAGYAASIRHVGAGLAPTLRAEQLCQGHCPLQ
+GLPARHPEFCEEETALFARLLGVDVRRLSTLAAGGHVCTTHIPLGRA
+>3_819
+MVYSDQSASPPAPAPAEGTRERVLQLVLTRGPVSAAEIGRELELTAAAVRRHLDALEEDS
+LVEVKRVTAARGAGRPSRRYVVTSHAQEHLPKDHLAVALDTLARLEELGGEEEVRRTARH
+AFREIEERFTAAVDGRETALQDRTRILARVLDEAGYAGTLRHFGAGLAPTLRADQVCQGH
+CPFQGIPARHPEFCEEETALFARLLEVDVRRLSTLAAGAHVCTTHVPLGRD
+>4_1041
+MVYSDQSASPPAPAPAEGTRERVLQLVLTRGPVSAAEIGRELELTAAAVRRHLDALEEDS
+LVEVKRVTAARGAGRPSRRYVVTSHAQEHLPKDHLAVALDTLARLEELGGEEEVRRTARH
+AFREIEERFTAAVDGRETALQDRTRILARVLDEAGYAGTLRHFGAGLAPTLRADQVCQGH
+CPFQGIPARHPEFCEEETALFARLLEVDVRRLSTLAAGAHVCTTHVPLGRD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001222.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001222.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1c36dcd5d7657a51e8679b11a1942fb4ef7d0cf7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001222.fa
@@ -0,0 +1,69 @@
+>0_1729
+MTDAQHPSTAPALDRTAPARDFVYSEQDRRMVDTLKVLSADAVEQAGHGHPGTAISLAPV
+AWQMYQNVMHLDPQDDRWEGRDRFILSAGHASLIQYLQLFAAGAGLELEDIRALRTEGSK
+TPGHPEYGHTHGVEVTTGPLGQGLAMGVGFAYEQRRLRGLMDPDAAPGTSPFDHHVFVLA
+SDGDIQEGVAAEASSLAGHQELGNLVVVYDANRISIEDDTDIAFTEDVSARYEAYGWHVQ
+EVDWTNGALGHAVTEYTEDVEALYEALVAAKAETGRPSLIKLRTVIGWPSPTKQNTGGVH
+GSKLGAEELAGLKEGLGFDPAESFDVDPEVLANSRSIAERSAAYRRTWEGAFQAWREAHP
+ENARLYDRLAGRELPEGFAEAFPSWDADEKGLATRAASGEVLTALAPVMPELWGGSADLA
+RSNNTTMKGEPSFIPARRSTATWQGDEHGRTLHFGIREFAAGAIVNGITIGGLTRAYMGT
+FLTFSDYMRPAVRLAALMGTPSVYVWTHDSIGLGEDGPTHQPVEHLAALRAIPGLDVVRP
+ADANETAWAWRTVLENRDRPAGMVLSRQNLPVLPRDTDGFASAEGVARGAYVLVDAVGGS
+GAPAPARVLLIATGSEVSVAVHARELLQAEGVPTRVVSAPCLEWFAEQDEAYRAEVLPDG
+PDAPVRVSVEAGIAMPWFEHTVTAVSRGARVSLEHYGESADGARLMEKYGFTGEAVAQAA
+RGLL
+>1_1086
+MTDAAQPSTPPTLDRVAPARGFVYSEQDRRMVDTLKALSADAVEKAGHGHPGTAISLAPV
+AWQLYQNVMHLDPTDDRWEGRDRFILSAGHASLIQYLQLFAAGAGLEIEDIQGLRTEGSR
+TPGHPEYGHTHGVEVTTGPLGQGLAMGVGFAYEQRRVRGLMDPDAAPGTSPFDHHVFVLA
+SDGDIQEGVAAEASSLAGHQELGNLVVVYDANRISIEDDTDIAFTEDVVRRYEAYGWHVQ
+EVDWTNGAQGHAVTEYTEDVEALYDALVAAKAETGRPSLIKLRTVIGWPSPTKQNTGGIH
+GSKLGTDEVAGLKESLGLDPTKTFDVDPELLARARSIAERSAEYRRGWEVAFQAWREANP
+ENARLYDRLAGRELPAGFADAFPSWDADEKGLATRAASGEVLTALAPVMPELWGGSADLA
+GSNNTTMKGEPSFIPARRSTATWQGHEYGRTLHFGVREFAAGAIVNGITIGGLTRAYVGT
+FLTFSDYMRPAVRLAALMGTPSTYVWTHDSIGLGEDGPTHQPVEHLAALRAIPGLDVVRP
+ADANETAWAWRTVLEHRDRPAGLVLSRQSLPVLPRDTDGFAPASGVARGAYVLIDATDAD
+GAPTPARALLIATGSEVSVAVRARALLQADGVPTRVVSAPCLEWFAEQDEAYRAEVLPDG
+PDAPVRVSVEAGIAMPWFEHTVTASSPGARVSLEHYGESADGARLMEKYGFTGEHVAEVT
+RGLL
+>2_1622
+MTDTASTALDRTLPARDFVYDEQDRRMVDTLKVLAADAVEKAGHGHPGTAISLSPVAWQL
+YQNVMHLDPSDDRWEGRDRFILSAGHASLIQYLQLFAAGAGLELEDIAALRTEGSLTPGH
+PEYGHTHGVEVTTGPLGQGLAMAVGFAYEQRRLRGLMDPDAAPGTSPFDHHVFVLASDGD
+IQEGVSSEASSLAGHQELGNLVVVYDANRISIEDDTDISFTEDVAKRYKAYGWHVQEVDW
+SNGAQGHEVTEYTEGVQDLYEALVAAKAETGRPSLIKLRTVIGWPSPTKQNTGGIHGSKL
+GGDEVVGLKEALGFDPQKSFDVDPEVLAHARSISERSAAYRETWEAAFAAWREAHPENAR
+LYDRLASRELPAGFEDAFPSWDADEKGVATRAASGKVLTALAPVMPELWGGSADLAGSNN
+TTMEGEPSFIPAHRSTAAWQGDPFGRTLHFGIREFAAGAIVNGITIGGLTRAYMGTFLTF
+SDYMRGAVRLAALMGTPAVYVWTHDSVGLGEDGPTHQPVEHLAALRAIPGLDVVRPADAN
+ETAWAWRTILQHRDRPAGLVLTRQNVPVLPRGTEGFAPADGVARGAYVLVDGADASGAAA
+PARVVLIATGSEVSVAVGARELLQAEGVPTRVVSAPCLEWFAEQDEAYRAEVLPDGPGAP
+VRVSVEAGIAMPWHELTVTQSSRGARVSLEHYGESADGPHLLKKYGFSPENVADTARGLL
+>3_814
+MTDAAQPSTPPTLDRVAPARGFVYSEQDRRMVDTLKALSADAVEKAGHGHPGTAISLAPV
+AWQLYQNVMHLDPTDDRWEGRDRFILSAGHASLIQYLQLFAAGAGLEIEDIQGLRTEGSR
+TPGHPEYGHTHGVEVTTGPLGQGLAMGVGFAYEQRRVRGLMDPDAAPGTSPFDHHVFVLA
+SDGDIQEGVAAEASSLAGHQELGNLVVVYDANRISIEDDTDIAFTEDVVRRYEAYGWHVQ
+EVDWTNGAQGHAVTEYTEDVEALYDALVAAKAETGRPSLIKLRTVIGWPSPTKQNTGGIH
+GSKLGTDEVAGLKESLGLDPTKTFDVDPELLARARSIAERSAEYRRGWEVAFQAWREANP
+ENARLYDRLAGRELPAGFADAFPSWDADEKGLATRAASGEVLTALAPVMPELWGGSADLA
+GSNNTTMKGEPSFIPARRSTATWQGHEYGRTLHFGVREFAAGAIVNGITIGGLTRAYVGT
+FLTFSDYMRPAVRLAALMGTPSTYVWTHDSIGLGEDGPTHQPVEHLAALRAIPGLDVVRP
+ADANETAWAWRTVLEHRDRPAGLVLSRQSLPVLPRDTDGFAPASGVARGAYVLIDATDAD
+GAPTPARALLIATGSEVSVAVRARALLQADGVPTRVVSAPCLEWFAEQDEAYRAEVLPDG
+PDAPVRVSVEAGIAMPWFEHTVTASSPGARVSLEHYGESADGARLMEKYGFTGEHVAEVT
+RGLL
+>4_1036
+MTDAAQPSTPPTLDRVAPARGFVYSEQDRRMVDTLKALSADAVEKAGHGHPGTAISLAPV
+AWQLYQNVMHLDPTDDRWEGRDRFILSAGHASLIQYLQLFAAGAGLEIEDIQGLRTEGSR
+TPGHPEYGHTHGVEVTTGPLGQGLAMGVGFAYEQRRVRGLMDPDAAPGTSPFDHHVFVLA
+SDGDIQEGVAAEASSLAGHQELGNLVVVYDANRISIEDDTDIAFTEDVVRRYEAYGWHVQ
+EVDWTNGAQGHAVTEYTEDVEALYDALVAAKAETGRPSLIKLRTVIGWPSPTKQNTGGIH
+GSKLGTDEVAGLKESLGLDPTKTFDVDPELLARARSIAERSAEYRRGWEAAFQAWREANP
+ENARLYDRLAGRELPAGFADAFPSWDADEKGLATRAASGEVLTALAPVMPELWGGSADLA
+GSNNTTMKGEPSFIPARRSTATWQGHEYGRTLHFGVREFAAGAIVNGITIGGLTRAYMGT
+FLTFSDYMRPAVRLAALMGTPSTYVWTHDSIGLGEDGPTHQPVEHLAALRAIPGLDVVRP
+ADANETAWAWRTVLEHRDRPAGLVLSRQSLPVLPRDTDGFAPASGVARGAYVLIDATDAD
+GAPTPARALLIATGSEVSVAVRARALLQADGVPTRVVSAPCLEWFAEQDEAYRAEVLPDG
+PDAPVRVSVEAGIAMPWFEHTVTASSPGARVSLEHYGESADGARLMEKYGFTGEHVAEVT
+RGLL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001226.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001226.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2b5208b4ee8d0051526d79462f8817bf6cd31a74
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001226.fa
@@ -0,0 +1,35 @@
+>0_1733
+MKIRMHDTTTSQVAKRITQLREKGGVVALGRVLTLVISTDDAGIEAAVEAANAASLEHPC
+RIVVLALGDPAAPTRLDAEIRVGGDAGASDVVVLWCAGENAHADESLVSGLLLPDAPIVA
+WWPGVPPAVPSETALGRLAHRRITDTASAARAEPALWTLRQGHRDGDTDLAWTRLTLWRI
+QVAGIFDTLDVAALRSVTVDGAPDSPSTMLLAAWLTLALKVPVTIAHSKAGHGIRAVRLR
+CQDGDVVLSRSQSQVARLYQQGRPVQRISLPRRTDQDCLAEELRRLDPDEVFGAVLHRGL
+PRTDLSPVQASER
+>1_1082
+MKIRMHDTTTSQVAKRITQLREKSGVVALGRVLTLVISTDDAGIESAVQAANAASLEHPC
+RIVVLALGDPAAPTRLDAEIRVGGDAGASDVVVLWCAGENAHADESLVSGLLLPDAPIVV
+WWPGVPPGVPSATALGRLAHRRITDTASASAAEPALWALRAGHHEGDTDLAWTRLTLWRI
+QVAGIFDTLDVATLRSVTVDGAPDSPSTMLLAAWLTLTLKVPVTIAHSKVGHGIRAVRLR
+CTDGDVVLSRSQSQVARLYQQGRPVQRISLPRRTIQDCLAEELRRLDPDEVFGAVLHQGL
+PRTDLSPVQASER
+>2_1626
+MKIRMHDTTTSQVAKRLTALRESAGVSALGRVLTLVIVTDDAGIEAALGAANAASLEHPC
+RIVVLALGDPLAPTRLDAEIRVGGDAGASDVVVLWCQGEDAVADEPLVSGLLLPDAPIVV
+WWPGEPPAEPATTALGRLAHRRITDSATCRDAKETLQRLAAGLHDGDTDLAWTRLTLWRS
+QVAAILDNLDLADVRSVTVDGAPDSPSTLLLAAWLTWGLDRPVTIAHSKAGHGIRAVRLR
+GPEGDVVLSRSQSEVARLYQQGRPVQRISLPRRSDQDCLAEELRRLDPDEVYGDVLRVGL
+PRTDLAPVDASDR
+>3_810
+MKIRMHDTTTSQVAKRITQLREKSGVVALGRVLTLVISTDDAGIESAVQAANAASLEHPC
+RIVVLALGDPAAPTRLDAEIRVGGDAGASDVVVLWCAGENAHADESLVSGLLLPDAPIVV
+WWPGVPPGVPSATALGRLAHRRITDTASASAAEPALWALRAGHHEGDTDLAWTRLTLWRI
+QVAGIFDTLDVATLRSVTVDGAPDSPSTMLLAAWLTLTLKVPVTIAHSKVGHGIRAVRLR
+CTDGDVVLSRSQSQVARLYQQGRPVQRISLPRRTIQDCLAEELRRLDPDEVFGAVLHQGL
+PRTDLSPVQASER
+>4_1032
+MKIRMHDTTTSQVAKRITQLREKSGVVALGRVLTLVISTDDAGIESAVQAANAASLEHPC
+RIVVLALGDPAAPTRLDAEIRVGGDAGASDVVVLWCAGENAHADESLVSGLLLPDAPIVV
+WWPGVPPGVPSATALGRLAHRRITDTASASAAEPALWALRAGHHEGDTDLAWTRLTLWRI
+QVAGIFDTLDVATLRSVTVDGAPDSPSTMLLAAWLTLTLKVPVTIAHSKVGHGIRAVRLR
+CTDGDVVLSRSQSQVARLYQQGRPVQRISLPRRTIQDCLAEELRRLDPDEVFGAVLHQGL
+PRTDLSPVQASER
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001230.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001230.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b694861d33632dd6a8a3eab30fca39d403e97464
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001230.fa
@@ -0,0 +1,35 @@
+>0_1738
+MTKIAINGYGRIGRNIVRVLRDRGYENLELVAVNDLADNEDLFWLTQYDTILGRYPGELE
+LTETGFRIDGRDVAFFSEPDPAKLPWGELGVDIVIECTGFFTTGPKAKAHLDAGAKKVLL
+SAPGKEVDGTFVMGVNEKNYDSATMDIVSNASCTTNCLAPMAKILNDEFGIVDGIMTTIH
+AYTGDQNLHDSVHKKDRRRARAAAQNMVPTDTGAAKAIGEVIPELKGKLDGFAMRVPTIT
+GSATDLTVELTRHVEVEEINAAFKKAAESGPLQGRLVYSEDPIVSSDIITSPAACTFDAP
+LTKSIGQTVKIIGWYDNEYGYTSQLVDFADLIGSKL
+>1_1078
+MTKIAINGYGRIGRNIVRVLRDRGHENLELVAVNDLADPEDLFWLTQYDTILGRYPGELE
+RTEKGFRIDGRDVAFFQEADPTKLPWGELGVDLVIECTGIFTTGPKAQAHLDAGAKKVLI
+SAPAKEVDGTFVMGVNEHTYDAESMHIVSNASCTTNCLAPMAKVLNDEFGIVDGIMTTIH
+AYTGDQNLHDNVHKKDRRRARAAAQNMVPTSTGAAKAIGEVIPELKGKLDGFAMRVPTIT
+GSATDLTVELTRHVEVEEINAAFKKAAESGPLQGRLVYSEDPIVSSDIITSPAACTFDAP
+LTKSIGQTVKIIGWYDNEYGYTSQLMDFADLIGSKL
+>2_1630
+MTKIAINGYGRIGRNAVRVLLEQGHDDLELVAVNDLAATEDLFWLTKYDTILGRFPGELE
+LTDKGFSINGKDVAFFAETDPANLPWGELGVDIVVECTGRFTTGPAAKAHLDAGAKKVLL
+SAPGKEVDGTFVMGVNEGDYDSSTMHIVSNASCTTNCLAPMVKVLNDEFGIVDGIMTTIH
+AYTGDQNLHDNVHKKDRRRARAAAQNMVPTSTGAAKAIGEVIPELKGKLDGFAMRVPTIT
+GSATDLTVELTRHVEAEEVNEAFRRAAESGPLVGRLVYSTDPIVSSDIVTAPAACTFDAP
+LTKSIGQTVKVIGWYDNEYGYTCQLMDMASHMASKL
+>3_806
+MTKIAINGYGRIGRNIVRVLRDRGHEGLELVAVNDLADPEDLFWLTKYDTILGRYPGELE
+RTEKGFRIDGRDVAFFQEADPTKLPWGELGVDLVIECTGIFTTGPKAQAHLDAGAKKVLI
+SAPAKEVDGTFVMGVNEHTYDAETMHIVSNASCTTNCLAPMAKVLNDEFGIVDGIMTTIH
+AYTGDQNLHDNVHKKDRRRARAAAQNMVPTSTGAAKAIGEVIPELKGKLDGFAMRVPTIT
+GSATDLTVELTRHVEVEEINAAFKKAAESGPLQGRLVYSEDPIVSSDIITSPAACTFDAP
+LTKSIGQTVKIIGWYDNEYGYTSQLMDFADLIGSKL
+>4_1028
+MTKIAINGYGRIGRNIVRVLRDRGHENLELVAVNDLADPEDLFWLTQYDTILGRYPGELE
+RTEKGFRIDGRDVAFFQEADPTKLPWGELGVDLVIECTGIFTTGPKAQAHLDAGAKKVLI
+SAPAKEVDGTFVMGVNEHTYDAETMHIVSNASCTTNCLAPMAKVLNDEFGIVDGIMTTIH
+AYTGDQNLHDNVHKKDRRRARAAAQNMVPTSTGAAKAIGEVIPELKGKLDGFAMRVPTIT
+GSATDLTVELTRHVEVEEINAAFKKAAESGPLQGRLVYSEDPIVSSDIITSPAACTFDAP
+LTKSIGQTVKIIGWYDNEYGYTSQLMDFADLIGSKL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001234.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001234.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5fda170724e8d9c7b0349809b25517611bdbeec2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001234.fa
@@ -0,0 +1,30 @@
+>0_1742
+MSEESLRPEKPPTSEVLVITGMSGAGRTTAAHALEDHGWYVVENMPPPLFITLADLVARS
+PEAFPRLAIVVDVRSRAYFPELHAALQQLENNGVEYRMVFLEADEHVLVRRFEAGRRPHP
+LQGNASLLDGIRAERDMLAELKARADVVVDTTELNVHGLATEITELFSVSGPVTLRLTLM
+SFGFKYGVPADANFVADMRFIPNPHWVPALRPHTGTEAEVSDYVLTRPGVEDFLRSYTAM
+LAPVFEGYRRENKHYATLAIGCTGGKHRSVAVAEELARRLAQVPHVTVQVQHRDMGRE
+>1_1074
+MTEETLQPEKPPTSEVLVIAGMSGAGRTTAAHALEDHGWDVVENMPPALFGTLAELIARS
+PEAFPRLAIVVDVRSRSYFEELYAALQHLANSGVEYRTVFLDAEDHVLLQRFEAGRRPHP
+MQGNARLLDGIRAERDVVEPLKARADVVVDTTELNVHGLATEITELFSESGPVTLRLTIM
+SFGFKYGVPADANFVADMRFIPNPHWVPALRPHTGTEAAVADYVLSRPGVEDFLRTYVAM
+LGPVFEGYRRENKHYATLAIGCTGGKHRSVAVAEELARRLAQVPHVTVHVQHRDMGRE
+>2_1634
+MSADEHLQPDKPPSSEVLVITGMSGAGRTTAAHALQDHGWYVVENMPPQLLGTLSDLVAR
+SPEAFPRLAIVVDVRSRSYFNELRTALQQLESTGVEFRTVFLEASDEVLVRRFEAGRRPH
+PLQGNARLLDGIQAEREILSELKERADIVVDTSALNVHGLATEVTQLFSEDGPVTVRLNV
+MSFGFKYGLPSDANFVADMRFVANPHWVPELRSKTGLDPEVSGFVLGQPGVQEFLSNYLA
+ALGPVVEGYRRENKHYATLAVGCTGGKHRSVAVAEELARRVAQWPRVSVHVDHRDVGRE
+>3_802
+MTEETLQPEKPPTSEVLVIAGMSGAGRTTAAHALEDHGWDVVENMPPALFGTLAELIARS
+PEAFPRLAIVVDVRSRSYFEELYAALQHLANSGVEYRTVFLDAEDHVLLQRFEAGRRPHP
+MQGNARLLDGIRAERDVVEPLKARADVVVDTTELNVHGLATEITELFSESGPVTLRLTIM
+SFGFKYGVPADANFVADMRFIPNPHWVPALRPHTGTEAAVADYVLSRPGVEDFLRTYVAM
+LGPVFEGYRRENKHYATLAIGCTGGKHRSVAVAEELARRLAQVPHVTVHVQHRDMGRE
+>4_1024
+MTEETLQPEKPPTSEVLVIAGMSGAGRTTAAHALEDHGWDVVENMPPALFGTLAELIARS
+PEAFPRLAIVVDVRSRSYFEELYAALQHLANSGVEYRTVFLDAEDHVLLQRFEAGRRPHP
+MQGNARLLDGIRAERDVVEPLKARADVVVDTTELNVHGLATEITELFSESGPVTLRLTIM
+SFGFKYGVPADANFVADMRFIPNPHWVPALRPHTGTEAAVADYVLSRPGVEDFLRTYVAM
+LGPVFEGYRRENKHYATLAIGCTGGKHRSVAVAEELARRLAQVPHVTVHVQHRDMGRE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001236.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001236.fa
new file mode 100644
index 0000000000000000000000000000000000000000..117645162032f444ebdbe090ce48469984bec888
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001236.fa
@@ -0,0 +1,25 @@
+>0_1746
+MPETARNRLLHDLPAVTVRTSSVSEMDNNVYLLTSKTTGAQVLIDAADDAEAIRDLIASA
+AGDTPCEPRLEMIVTTHRHWDHVRALPALASLTGARTAAGEDDADAIAEATGVAPDVRLH
+HGDIVGADGLRLEVVALRGHTPGSIALVCRPEADEPAVLFTGDSLFPGGVGNTEGDDGRF
+RQLFTDVSERIFDAFDDDVVVHPGHGASTTLGAERPHLPKWAERGW
+>1_1070
+MPETARNRLLHDLPAVTVRTCSVSEMDNNVYLLTSKTTGAQVLIDAAAEAEAIRDLIASA
+ADDTPCEPRLEMIVTTHRHWDHVRALPALASLTGARTAAGEDDADAIAEATGVAPDVRLR
+HGDTVGADGLRLEVVALRGHTPGSIALVCRPEADEPAVLFTGDSLFPGGVGNTEGDDGRF
+RQLFTDVSDRIFDAFDDDVVVHPGHGASTTLGAERPHLPEWAERSW
+>2_1638
+MPATAEPRLLHDLPAVTVRAVSVSEMDNNAYVLTSKTTGAQVLIDAAAEPETLRDLLASA
+AADTPCELRLELIVTTHRHWDHVRALPALATVTGARTAAGEDDADAIAAETGVTPDVRLA
+HGSRTGAEGIELEVIALRGHTPGSVALAYRPEADEPAVLFTGDSLFPGGVGNTQGDAERF
+ASLIRDVEDRVFAAFDDDVVVHPGHGASTTLGAERPHLQEWRERGW
+>3_798
+MPETARNRLLHDLPAVTVRACSVSEMDNNVYLLTSKTTGAQVLIDAAAEAEAIRDLIASA
+ADDTPCEPRLEMIVTTHRHWDHVRALPALASLTGARTAAGEDDADAIAEATGVAPDVRLR
+HGDIVGVDGLRLEVLALRGHTPGSIALVCRPEADEPAVLFTGDSLFPGGVGNTEGDDGRF
+RQLFTDVTERIFDAFDDDVVVHPGHGASTTLGAERPHLPEWAERGW
+>4_1020
+MPETARNRLLHDLPAVTVRACSVSEMDNNVYLLTSKTTGAQVLIDAAAEAEAIRDLIASA
+ADDTPCEPRLEMIVTTHRHWDHVRALPALASLTGARTAAGEDDADAIAEATGVAPDVRLR
+HGDIVGVDGLRLEVLALRGHTPGSIALVCRPEADEPAVLFTGDSLFPGGVGNTEGDDGRF
+RQLFTDVTERIFDAFDDDVVVHPGHGASTTLGAERPHLPEWAERGW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001240.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001240.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3d6410dd2fddb7ccc424431d79e45a276045c2bb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001240.fa
@@ -0,0 +1,30 @@
+>0_1751
+MTALTLIALGVHDLAAALLPRAWAARRREVLALAAGTAAAVLAAVLLVVLVPGAPALAIG
+GVLVALALLAAWWRLGAGAPLGTLGVAAVVALVAVAEIGLARTAGPAVPIAFTVVAVGLA
+LGETANRITRAVLLLAGRRADAAPAPESDAPAEAVLAPETSADDAEAPPLRGGRYIGPME
+RVLMVVLGLAHAWPVVAALMAAKGLVRFPEISADRGEGSRAEEFLVGSLASWGIAAAGGA
+LVWVGLGAPALS
+>1_1064
+MTALALLALGLHDLLDAVLPGAWPTPRRRWLARAGAAVAAVLAAVLVAVLAPTGISVAVG
+GGLVALGLLMGWTWLHPDRPLGVVAVAAAVGLVAVLESTLAPAGLRSAPPALTLLAVTVA
+LTETGNRVTRAVLALAGRSADGGDEEAEDPAAEPTTVPSAAPTDPAADGLRGGRYIGPME
+RLLMVVLGLAQAYPVIAALMAAKGIVRFPEISADRGAGSRAEEFLIGSLASWGLAAAGAV
+VVWLALGLTAPGAA
+>2_1643
+MTALTLLALGLRDLLAVTPGRTSRHPWLALLAAVGAVLIGGVVLAGGAASAAETLSAVAL
+ALGAVLAWHALARAGSPHLRVGALGGVVGLAVAEHTGALTVAHGPVGMALLGAGLVLVET
+ANVVTRDVLRLAGRPSTDDVHDADDVHDADDDGEGLRGGRFIGPMERLLMAVLGLMAAWQ
+AVAAIMAAKGIVRFPEISKDARAGDAKGGPMGASAEEFLVGSLASWTLAAGAGLVVHLAL
+AGG
+>3_792
+MTALALLALGLHDLLDAVLPGAWPAPRRRWLARAGAAVAAVLAAVLVAVLAPTGVAVAVG
+GGLVSLGLLMGWTWLHPDRPLGVVAVVAVVGLVAVLESTLAPAGLRSAPPALTLLAVALA
+LTETGNRVTRAVLALAGRPADGGDEEAEDPAAEPTTVPSAAPTDPAADGLRGGRYIGPME
+RLLMVVLGLAQAYPVIAALMAAKGIVRFPEISADRGAGSRAEEFLIGSLASWGLAAAGAV
+VVWLALGLTAPGAA
+>4_1013
+MTALALLALGLHDLLDAVLPGAWPAPRRRWLARAGAAVAAVLAAVLVAVLAPTGVAVAVG
+GGLVSLGLLMGWTWLHPDRPLGVVAVVAVVGLVAVLESTLAPAGLRSAPPALTLLAVALA
+LTETGNRVTRAVLALAGRPADGGDEEAEDPAAEPTTVPSAAPTDPAADGLRGGRYIGPME
+RLLMVVLGLAQAYPVIAALMAAKGIVRFPEISADRGAGSRAEEFLIGSLASWGLAAAGAV
+VVWLALGLTAPGAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001241.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001241.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b903f443f25bf86129c8a516d8e98634d10e3a12
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001241.fa
@@ -0,0 +1,25 @@
+>0_1752
+MTRAPQAAAVIADIVGSRRLPDREAAQEQILAAFAVAEKDVPPLRAAWATVGDEFQALHG
+VWPQAVRAVVRVSLALPPGLELRFGIGVGERRSLDDGAGDRIEDGTAWYRARAAVERAHA
+RADGAATAFVAADPSLTAAVDGVLLLRDHVLGRLKARERRLAAALLGGATQTQAARAERI
+TQSAVSQAVTRSGIDRLLELDAALAEAAAGRPGHAGAAGEGAGDEGDAG
+>1_1063
+MSAAPPVAAVIADIVGSRALPDRDRAQEQILAAFAAAEQDVPPLRPAWASVGDEFQALHR
+TWPDALRLTVRVTLALPPGLDLRFGIGLGQRRALDAGGDGIEDGPAWYRAREAVERAHER
+AVGAATAFRAADPSLTAAVDGLVLLRDHVLGRLKARERRIAAALLGGATQAEAARAERIT
+QSAVSQAVARSGIDRLLELDAELAAAATEVAP
+>2_1644
+MSLTDEGPVRGTAVIADIVGSRGLRDRAAAQEAILAAFAAAEEAVPARIPAWATVGDEFQ
+ALHADWAAAVRATLRVAVALPEGVELRFGLGDGVHREVTGAADDDGRPILDGSAWHRARE
+ALEAAEHRTRGLAGAYRGPDADLTAAVDGQLLVRDHVLRRLKARERRIAAALLAGRTQAE
+TATAERITQGAVSQAVARSGVRELLALDAALGALPGAGRGAKATAEEDRP
+>3_791
+MSAAPPVAAVIADIVGSRALPDRERAQEQILAAFAAAEQDVPPLRPAWASVGDEFQALHR
+TWPDALRLTVRVTLALPPGLDLRFGIGLGQRRALDAGGDGIEDGTAWYRAREAVEHAHER
+AAGAATAFRAADPSLTAAVDGLALLRDHVLGRLKARERRIAAALLGGATQAEAARAERIT
+QSAVSQTVARSGIGRLLELDAELAAAATEVAP
+>4_1012
+MSAAPPVAAVIADIVGSRALPDRERAQEQILAAFAAAEQDVPPLRPAWASVGDEFQALHR
+TWPDALRLTVRVTLALPPGLDLRFGIGLGQRRALDAGGDGIEDGTAWYRAREAVEHAHER
+AAGAATAFRAADPSLTAAVDGLALLRDHVLGRLKARERRIAAALLGGATQAEAARAERIT
+QSAVSQTVARSGIGRLLELDAELAAAATEVAP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001249.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001249.fa
new file mode 100644
index 0000000000000000000000000000000000000000..92150877dfc93595d50a4ce9ef3702c5db85169a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001249.fa
@@ -0,0 +1,20 @@
+>0_1765
+MDLVLTVIGSVLVVAGALVFVTAGLGLIRFPDPYTRISATGTAGGVGMILIVVGGLVLAP
+SVANVVKVALIVVLQLGSAAVATMALGRSAYLTGVPMNPGHYDELAEDTPGREHGEPAPR
+TPDAS
+>1_1053
+MDVVLTAAGSVLVVIGALAFVTAGLGLIRFPDPYTRVSAVGTAGGVGMILIVVGALLLAP
+GVAAFVKVALIVVLQLGSASVATMALGRSAYLTGVPMNPGHYDELAEDTPGREHGEPAPR
+APDEV
+>2_1654
+MDLVMTVAGSVLAVAGAVVFLGAAVGLIRFPDPYTRISATGTAGGVGMILIVTGGLLLMP
+SVANLVKVVLIVVLQLGTAAIATMALGRSAYLTGVPMNLAHYDELAEDTPGREHGEPAPR
+HPED
+>3_781
+MDVVLTAAGSVLVVIGALAFVTAGLGLIRFPDPYTRVSAVGTAGGVGMILIVVGALLLAP
+GVAAFVKVALIVVLQLGSASVATMALGRSAYLTGVPMNPGHYDELAEDTPGREHGEPAPR
+APDEV
+>4_1002
+MDVVLTAAGSVLVVIGALAFVTAGLGLIRFPDPYTRVSAVGTAGGVGMILIVVGALLLAP
+GVAAFVKVALIVVLQLGSASVATMALGRSAYLTGVPMNPGHYDELAEDTPGREGGRAAPR
+LPDMD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001252.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001252.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4faed0ca9512b5b7a6acf3185e212d8dcee3bcea
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001252.fa
@@ -0,0 +1,55 @@
+>0_1768
+MSPEALGQLLPLFVAVPLITAGLLTLAGDRPRVHRLVVALVLCLTAGAGALIVARSLDGD
+VLATSVGGWPGGIGIGFAADMLTGLMLLLTSLLTLVGVNLAHGTRVVNSLYFGPLMLVLM
+AGVNGALLTADLFNLFVFIEVMLLPSYGLYVLSANRREPLRRVDGARLYVTLNLLTSTIL
+VVAVGFLYALTGTVNLAVMAGAAARDERVAIAGGLVLFALSIKASVVPLHGWLARAYPST
+SPAVTAIFAALHTKVAVYALYRVFSVLFDNDARFLPLLLALAGLTLAVGALASVGVHGVR
+LVLSWQMVSGIGGILVGLGLSTQLGLSAGLFYLVHHMVAMGCLLAATAAVEVRYGTGRLA
+DLRGLARREPLIAVVFFVGLLSIVGIPPFSGFVGKLMLVTAGVEAGRLVTVAVVLVGSLV
+SLWALLRVWDAWFWGEPGTPHGLRERLATAALPVVGRGAERTGPSGRGSSTDHERTESWT
+STQTIDPPTGVLPVTFAADEDVTRSRIPVRLAMPGVVLAAATLVLGLAGQALWTLTDVAA
+QGLLDPARYIEAVLAP
+>1_1050
+MSAVPLGQLLPLFAAVPLLSAGLLVLAGERPRLHRAVLFAVLGLVTTGGLALGVHALDGS
+VLATSLGGWPGGIGIGFAADMLSALMLVLTSALTIVGAAFAYGSRVANSQFFAPLLLILI
+GGVNGALLTADLFNLFVFIEVMLVPSYGLYVLSANRREPLRRVDGARLYVTLNLLTSTIL
+LVGVGFVYGLTGSVNLAMLAGSAAADPRIAIAAGMVLFALSIKASVAPLHGWLAWAYSST
+SPAVTALFAALHTKVAVYGLYRIYSVMYDGDARLLPLILVLSLATLVVGALASVGEHGVR
+AVLSWQMVSGIGGILVGLGLSTRLGLAAGLFYLVHHMVAMGCLLMAAGAIEVRYGTGRLA
+DLQGLARREPLIAVAFFVGLLSLVGIPPFSGFVGKLMLVSAGLDAGRGVTAALVLGASLV
+SLWVLLRVWDAWFWGAPTAPHGHRERLATAAMPIVGRAGSVPSPSGRGSSTDHERTESWA
+SQETLDPPTGVLPVTVDPDEDVTRSRIPGRLAAPAVVLAMATLALGLGGQALWTVTDLAA
+QGLMDPSRYIEAVLNP
+>2_1657
+MSDHAVGLLLPLFVAVPLLSAGLLVVAGSRPRLHRAVLAAVLAGGTVGGGLLMARAADGS
+VAAAGVGGWPDGIAIAFAADMLTGLMVALTAGLTLVGAWFAYGSRVANSAHFAPFMLVLM
+AGVHGALLTADLFNLFVFIEVMLLPSYGLYVLSANRREPLRRVDGARMYVTLNLLTSTIL
+VTGVGFVYALTGSVNMAVLAGAARGDVRVALAAGLVLFALSIKASMLPMHGWLARAYPST
+SPAVTAIFAALHTKVAVYAMYRIYMVVYDGDPRLLGLILTLCLATLMVGAVASVGEHGAR
+AVLSWQMVSGIGGIMVGLGLATQAGLSAGLFYLVHHMVVMACLLTATGAIEVRYGSGRLA
+DLQGLAVREPLIAAAFFVGMLSLVGIPPFSGFAGKLALVLAGVAAGRTVTVVLVLVASLI
+SLWALLRIWDAWFWGRPRAPHGHRERLDTAALPLVHGDGVMPAAGAPVHPAGRGSSTDSE
+RAEAWASTETLDTPTGVLPVVVDPDEDHTASRIPLRLAGPAALMAAATLALGLGAEGLWS
+VTDQAARGLADPTAYIEAVLGR
+>3_778
+MSAVPLGQLLPLFAAVPLLSAGLLVLAGERPRLHRAVLFAVLGLVTTGGLALGVHALDGS
+VLATSLGGWPGGIGIGFAADMLSALMLVLTSALTIVGAAFAYGSRVANSQFFAPLLLILI
+GGVNGALLTADLFNLFVFIEVMLVPSYGLYVLSANRREPLRRVDGARLYVTLNLLTSTIL
+LVGVGFVYGLTGSVNLAMLAGSAAADPRIAIAAGMVLFALSIKASVAPLHGWLAWAYSST
+SPAVTALFAALHTKVAVYGLYRIYSVMYDGDARLLPLILVLSLATLVVGALASVGEHGVR
+AVLSWQMVSGIGGILVGLGLSTRLGLAAGLFYLVHHMVAMGCLLMAAGAIEVRYGTGRLA
+DLQGLARREPLIAVAFFVGLLSLVGIPPFSGFVGKLMLVSAGLDAGRGVTAALVLGASLV
+SLWALLRVWDAWFWGAPTAPHGHRERLATAAMPIVGRAGSVPSPSGRGSSTDHERTESWA
+SQETLDPPTGVLPVTVDPDEDVTRSRIPGRLAAPAVVLAMATLALGLGGQALWTVTDLAA
+QGLMDPSRYIEAVLNP
+>4_999
+MSAVPLGQLLPLFAAVPLLSAGLLVLAGERPRLHRAVLFAVLGLVTTGGLALGVHALDGS
+VLATSLGGWPGGIGIGFAADMLSALMLVLTSALTIVGAAFAYGSRVANSQFFAPLLLILI
+GGVNGALLTADLFNLFVFIEVMLVPSYGLYVLSANRREPLRRVDGARLYVTLNLLTSTIL
+LVGVGFVYGLTGSVNLAMLAGSAAADPRIAIAAGMVLFALSIKASVAPLHGWLAWAYSST
+SPAVTALFAALHTKVAVYGLYRIYSVMYDGDARLLPLILVLSLATLVVGALASVGEHGVR
+AVLSWQMVSGIGGILVGLGLSTRLGLAAGLFYLVHHMVAMGCLLMAAGAIEVRYGTGRLA
+DLQGLARREPLIAVAFFVGLLSLVGIPPFSGFVGKLMLVSAGLDAGRGVTAALVLGASLV
+SLWALLRVWDAWFWGAPTAPHGHRERLATAAMPIVGRAGSVPSPSGRGSSTDHERTESWA
+SQETLDPPTGVLPVTVDPDEDVTRSRIPGRLAAPAVVLAMATLALGLGGQALWTVTDLAA
+QGLMDPSRYIEAVLNP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001253.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001253.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4965426ab2a5f079dca787c0a131586ba40c8994
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001253.fa
@@ -0,0 +1,20 @@
+>0_1769
+MTIAITVGLLTFGAFYLFSKRELLRVILGMVLLGHAANLAIIAAGGTDRRGLPFAGRGDV
+ETQADALPQAFVLTAIVIAFAITVLLLTLAVTGRDDDAVADGHEAPDPLEQSAADARFPR
+EELRAAAARLGREAEARDGGRA
+>1_1049
+MTVALTVGLLTFGAFYLFSKRELLRVILGMVLLGHAANLAIIAAGGTDRRGLPFAGTSDV
+EVQADALPQAFVLTAIVIAFAITVLLLALAVTGRADDAVASPGETRDSLEQAAADARFPR
+EERHAAAGRIAQHYAGQGPEVRR
+>2_1658
+MTVALTVGLLMAGAVYLFSKRELLRVILGMVLLGHAANLAILATGGTDRRALPFVDGGPA
+PAGAADPLPQAFVLTAIVISFAVTVLLLVLAVTGRADDAVAAPGERPDVREAAAADARFP
+LAERHAAARTLTGSLPAAPEAGATPEREERA
+>3_777
+MTVALTVGLLTFGAFYLFSKRELLRVILGMVLLGHAANLAIIAAGGTDRRGLPFAGTSDV
+EVQADALPQAFVLTAIVIAFAITVLLLALAVTGRADDAVASPGETRDSLEQAAADARFPR
+EERHAAAGRIAQHYAGQGPEVRR
+>4_998
+MTVALTVGLLTFGAFYLFSKRELLRVILGMVLLGHAANLAIIAAGGTDRRGLPFAGTSDV
+EVQADALPQAFVLTAIVIAFAITVLLLALAVTGRADDAVASPGETRDSLEQAAADARFPR
+EERHAAAGRIAQHYAGQGPEVRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001255.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001255.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e777dcb255317f9b15ccc44247848c7fdfdf4280
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001255.fa
@@ -0,0 +1,25 @@
+>0_1772
+MPMTTPAEGTGLRAVVAEDETLIRLDLVEVLTGAGYEVVAEAGDGAAAVAAVREQRPDIV
+VMDVQMPVMDGIAAASEIAQDRLAPVVMLTAFSQRDLVERARTAGAMAYVVKPFTEHDLV
+PAVELAVARFEELRSLESEVRDLGDRLETRKLVDRAKSVLQDRLRLSEAESFRWIQKTSM
+DRRLTMREVAQAVIDQVR
+>1_1047
+MSTLTPPEETGLRAVVAEDETLIRLDLVEVLTGAGYRVVAEAGDGRAAVEAVREHRPDIV
+VMDVKMPVMDGIAAAGEIAGERLAPVVMLTAFSQRELVERARTAGAMAYVVKPFTEADLV
+PAIELAVARFDELRSLEAEVRDLGDRLETRKIVDRAKALLQERMRLTEAESFRWIQKTSM
+DRRLTMREVAQAVIDQVG
+>2_1660
+MTIPAESADPTAGLRVVVAEDEALIRLDVVETLTHAGHTVVAEVGDGQAAVAAVREHRPD
+IVVMDVMMPVMDGIAAAGEIAAERLAPVVMLTAFSQRDLVERASQVGAMAYVVKPFTEKD
+LLPAMELAVARFDQLRGLEEEVRGLEDRLATRKLVDRAKSLLQAHMGLSEAESFRWIQKT
+SMDRRLTMREVAQTVVDQIGA
+>3_775
+MSTLTPPEETGLRAVVAEDETLIRLDLVEVLTGAGYRVVAEAGDGRAAVEAVREHRPDIV
+VMDVKMPVMDGIAAAGEIAGERLAPVVMLTAFSQRELVERARTAGAMAYVVKPFTEADLV
+PAIELAVARFDELRSLEAEVRDLGDRLETRKIVDRAKALLQERMRLTEAESFRWIQKTSM
+DRRLTMREVAQAVIDQVG
+>4_996
+MSTLTPPEETGLRAVVAEDETLIRLDLVEVLTGAGYRVVAEAGDGRAAVEAVREHRPDIV
+VMDVKMPVMDGIAAAGEIAGERLAPVVMLTAFSQRELVERARTAGAMAYVVKPFTEADLV
+PAIELAVARFDELRSLEAEVRDLGDRLETRKIVDRAKALLQERMRLTEAESFRWIQKTSM
+DRRLTMREVAQAVIDQVG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001256.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001256.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b6c246eaebf8f3a030db186f4cd2797a12d0e158
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001256.fa
@@ -0,0 +1,50 @@
+>0_1773
+MRHAKIIATFGPATASDETTRSIIRAGADVVRLNMSHGDHEVHAASFERVRRLSVEERRP
+VAIFADLQGPKIRLGRFADGPHHLETGDRFTITTRDVEGTAELVGTTHAGLPGDVRPGDT
+LLVDDGKVRLRAVEVTDTDVVTEVEVGGDVSDSKGINLPGVAVDVPALSEKDEEDLRWAL
+RTGVDMVALSFVRDAADIERVHAIMDEEERRIPVIAKIEKPQAVDNLEAIVDAFDAVMVA
+RGDLGVELPLEDVPVVQKRAVDLARRWAKPVIVATQVLESMIENPRPTRAEASDCANAVL
+DGADAVMLSGETSVGRYPVETVQTMARIIESTETHGLEMIHPLGSRPRTRGGAITRAAVE
+VADQLDIPFLATFTESGDSARRLSRLRPRQPIYAFTHREHTHNILCLTWGVYPKMVSFQD
+STDKMTLQVEESLTSEGIAERGDLVVIAAGSPPGMVGSTNTLRVHRVGDDAGGGSSPARP
+VQKEPVGFWPARSPL
+>1_1046
+MRHAKIIATFGPATDSDETTRAIIRAGADVVRLNMSHGDHAVHETSYERVRRLSVEESRP
+VAIFADLQGPKIRLGRFTDGPHLLERGDRITITTRDVPGTRELVGTTHKGLPGDVAPGDV
+LLVDDGKVRLRAVEVTDTDVLAEVEVPGTVSDNKGINLPGVAVNVPALSEKDERDLRWAL
+RTGVDMVALSFVRDAADVDRVHEIMDEEERRVPVIAKIEKPQAVENLEAIVDAFDAVMVA
+RGDLGVELPLEDVPVVQKRAVDLARRWAKPVIVATQVLESMIDSPRPTRAEASDCANAVL
+DGADAVMLSGETSVGAYPVETVQTMARIIESTETHGLELIHPLGSRPRTRGGAITRAAVE
+VANQLEIPFLATFTESGDSARRLSRLRPRQPIYAFTHHEHTHNILCLTWGVYPKMVPFQD
+STDKMTLQVEQSLTSEGIAQHGDLVVIAAGSPPGAVGSTNTLRVHRVGDDAAGGSSAASP
+QTREPLGFWPARSPL
+>2_1661
+MRHAKIIATFGPATQTDETTRALIRAGADVVRLNMSHGDHEVHASSYERVRRLSVEEKRP
+VAIFADLQGPKIRLARFSDGPHELAVGDRFTITTREVTGSREIVGTTHKGLPGDVSVGDP
+LLVDDGKVRLRAVEVTDTDVVTEVVVPGKVSDNKGINLPGVAVNVPALSEKDEEDLRWAL
+ETGVDMVALSFVRDAADVTRVHEVMDEVGRRIPVIAKIEKPQAVDNLEAIVDAFDAIMVA
+RGDLGVELPLEDVPIVQKRAIELARRWAKPVIVATQVLESMIENPRPTRAEASDCANAVL
+DGADAVMLSGETSVGAYPVQTVETMARIIESTETHGLDMIHPLGSRPRTRGGAITRAAVE
+VAGQLDIPFLATFTESGDTARRLSRLRPSQPIYAFTHEEHTHNILCLTWGVYPKMVPFAD
+STDKMTMQVEESLTSEGIAEQGDLVVIAAGSPPGKVGSTNTLRVHRVGDGVAADSSPVAP
+EDREPVGFWAAHSPM
+>3_774
+MRHAKIIATFGPATDSDETTRAIIRAGADVVRLNMSHGDHAVHETSYERVRRLSVEERRP
+VAIFADLQGPKIRLGRFTDGPHLLERGDRITITTRDVPGTRELVGTTHKGLPGDVAPGDV
+LLVDDGKVRLRAVEVTDTDVLAEVEVPGMVSDNKGINLPGVAVNVPALSEKDERDLRWAL
+RTGVDMVALSFVRDAADVDRVHEIMDEEERRVPVIAKIEKPQAVENLEAIVDAFDAIMVA
+RGDLGVELPLEDVPVVQKRAVDLARRWAKPVIVATQVLESMIDSPRPTRAEASDCANAVL
+DGADAVMLSGETSVGAYPVETVQTMARIIESTETHGLELIHPLGSRPRTRGGAITRAAVE
+VANQLEIPFLATFTESGDSARRLSRLRPRQPIYAFTHHEHTHNILCLTWGVYPKMVPFQD
+STDKMTLQVEQSLTSEGIAQHGDLVVIAAGSPPGAVGSTNTLRVHRVGGDAAGGSSAASP
+QTREPVGFWPARSPL
+>4_995
+MRHAKIIATFGPATDSDETTRAIIRAGADVVRLNMSHGDHAVHETSYERVRRLSVEERRP
+VAIFADLQGPKIRLGRFTDGPHLLERGDRITITTRDVPGTRELVGTTHKGLPGDVAPGDV
+LLVDDGKVRLRAVEVTDTDVLAEVEVPGMVSNNKGINLPGVAVNVPALSEKDERDLRWAL
+RTGVDMVALSFVRDAADVDRVHEIMDEEERRVPVIAKIEKPQAVENLEAIVDAFDAVMVA
+RGDLGVELPLEDVPVVQKRAVDLARRWAKPVIVATQVLESMIDSPRPTRAEASDCANAVL
+DGADAVMLSGETSVGAYPVETVQTMARIIESTETHGLELIHPLGSRPRTRGGAITRAAVE
+VANQLEIPFLATFTESGDSARRLSRLRPRQPIYAFTHHEHTHNILCLTWGVYPKMVPFQD
+STDKMTLQVEQSLTSEGIAQHGDLVVIAAGSPPGAVGSTNTLRVHRVGDDAAGGSSAASP
+QTREPVGFWPARSPL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001257.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001257.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c628a753a82fc288b5573ee31b8d5b21b37b5e77
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001257.fa
@@ -0,0 +1,50 @@
+>0_1774
+MADPRGFLKHRERVARPSRPVPVRIMDFKDVHVRQDEAIVRTEASRCMDCGVPFCHAGCP
+LGNLIPEFNDLVYRDDWDEAGARLEATNNFPEFTGRICPAPCEASCVLGINQPAVSIKQV
+EQSIADHLFDAPSLTPHPPQRQNGLTVAVVGSGPAGLAAAQQLTRSGYTVVVYEKDEALG
+GLLRFGIPDFKLEKHLIDRRIAQMTEEGTRFRTGVRIGTDMSWEALQRRYDAVVLATGAP
+VGRELPLPGRGLDGIHLAMDYLVPVNRRVAGGEPEPISAQGRHVVILGGGDTGADCIGTA
+HRQGAASVTTLAIGRRPPEQRPEHQPWPTVPTLFEVASAHAEGGERTYLASTVEFLGDAE
+GRVRALKVAETEIRADGTRGPRAGTEHEIPADLVLLALGFTGADLDELVDRSAVSLERGL
+VVRDETYATQAPGVFACGDVSRGASLVVWAIAEGRAVAAEVDRFLTGDTMLPAPVRPSDH
+GFVLR
+>1_1045
+MADPRGFLKNRERVDRPTRPVPVRIMDFKDVYVRQDEAIVRTQAGRCMDCGIPFCHSGCP
+LGNLIPEWNDLVRRRRWDEAAARLHSTNNFPEVTGRICPAPCEDSCTLGINQPAVTIKQT
+EVAIAEQIFDNDWLEPVVPARLNGHTVAVVGSGPAGLAAAQQLTRAGFTVVVYERDERLG
+GLLRLGIPDFKLEKDVLDRRLAQMEAEGTRFRTGVEIGVDLPWDQLKARFDAVIVATGAP
+VARELPVPGRGLDGIHLAMDYLVQSNRAVAGDEVPDQISAEGRHVVILGGGDTGADCIGT
+AHRQGAASVTTLAIGQQLPVERPVHQPWPTIPKVHQQTTADAEGGARAHLASTVEFLGDE
+HGRVRALRVAETEYREDGTRGPKAGTEREVQADLVLLALGFTGIEEGLLTQQLGVHVTRG
+LVARKDGYETDEPGVFACGDAGRGASLVVWAIAEGRACAQEVDESLERWSRLPHPVDPDD
+RGLVLG
+>2_1662
+MADPRGFLKNRERVERPTRPVPVRIMDFKDVYVRQDEAVVRTQASRCMDCGIPFCHSGCP
+LGNLIPEWNDLVRRGRWEDAAARLHSTNNFPEVTGRICPAPCEDACTLGINQPAVTIKQT
+EVAIAEQIFDHDWLEPVVPTRINGHTVAVVGSGPAGLAAAQQLTRAGFTVVVYERDDRPG
+GLLRYGIPDFKLEKDVLDRRLAQMEAEGTRFRTGVEIGRDLAWDALKARFDAVIVATGAP
+VGRELPVPGRGLDGIHLAMDYLVQSNHATAGDDVPGQITAEGRHVVVLGGGDTGADCIGT
+AHRQGAASVTTLAIGQQLPVDRPVHQPWPTVPKVHQMTTADAEGGQREHLASTVEFLGDE
+NGRVRALRVAETEYRADGTRGPKAGTEREVKADLVLLALGFTGVEEEALTAQLAVRTERG
+LVARAGTYETDEPGVFVCGDAGRGASLVVWAIAEGRACAQAVDESLESWSRLPHPVDPTD
+RGLVLG
+>3_773
+MADPRGFLKNRERVERPTRPVPVRIMDFKDVYVRQDEAIVRTQAGRCMDCGIPFCHSGCP
+LGNLIPEWNDLVRRRRWDEAAARLHSTNNFPEVTGRICPAPCEDSCTLGINQPAVTIKQT
+EVAIAEQIFDNDWLEPVVPARLNGHTVAVVGSGPAGLAAAQQLTRAGFTVVVYERDERLG
+GLLRLGIPDFKLEKDVLDRRLAQMEAEGTRFRTGVEIGVDLPWDQLKARFDAVIVATGAP
+VARELPVPGRGLDGIHLAMDYLVQSNRAVAGDEVPDQISAEGRHVVILGGGDTGADCIGT
+AHRQGAASVTTLAIGQQLPVERPVHQPWPTIPKVHQQTTADAEGGARAHLASTVEFLGDE
+HGRVRALRVAETEYREDGTRGPKAGTEREVQADLVLLALGFTGIEEGLLTQQLGVHVTRG
+LVARKDGYETDEPGVFACGDAGRGASLVVWAIAEGRACAQEVDESLERWSRLPHPVDPDD
+RGLVLG
+>4_994
+MADPRGFLKNRERVERPTRPVPVRIMDFKDVYVRQDEAIVRTQAGRCMDCGIPFCHSGCP
+LGNLIPEWNDLVRRGRWDEAAARLHSTNNFPEVTGRICPAPCEDSCTLGINQPAVTIKQT
+EVAIAEQIFDNDWLEPVVPARLNGHTVAVVGSGPAGLAAAQQLTRAGFTVVVYERDERLG
+GLLRLGIPDFKLEKDVLDRRLAQMEAEGTRFRTGVEIGVDLPWDQLKARFDAVIVATGAP
+VARELPVPGRGLDGIHLAMDYLVQSNRAVAGDEVPDQISAEGRHVVILGGGDTGADCIGT
+AHRQGAASVTTLAIGQQLPVERPVHQPWPTIPKVHQQTTADAEGGARAHLASTVEFLGDE
+HGRVRALRVAETEYREDGTRGPKAGTEREVQADLVLLALGFTGIEEGLLTQQLGVHVTRG
+LVARKDGYETDEPGVFACGDAGRGASLVVWAIAEGRACAQEVDESLERWSRLPHPVDPDD
+RGLVLG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001259.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001259.fa
new file mode 100644
index 0000000000000000000000000000000000000000..321a64f1258db22bfc4d2b1782601790c61a492e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001259.fa
@@ -0,0 +1,35 @@
+>0_1776
+MKIYAYALSIILGIVLALWLAERRWKARGGPEGRVLDVALWAIPFGFVGGRLYHVFSSPD
+RYFGPGFDGTGDPVQILHVWNGGLGIWGAIALGAVGAWIACRRYGLRLSAFGDVVAPGIL
+LAQAVGRWGNWFNQELFGRPTTAPWGLRVDADHPNFPDGVAPDTLFHPTFLYESLWCLLG
+VAVLLLADRRWRLRRGAMVWAYVAWYTAGRVWIETLRIDDAELVTLFGLTQRLNVWTSIV
+MLLLALVMLAVILVKHGPAAAGPRSDDSVWLPGRGPALEAGAGAPVDAAVAGQGPDDGAG
+STAAGVREDR
+>1_1043
+MTALASLASPAALAPLAAFPAPGWDGFQLGPVKIHAYALCIILGIVLALWLAERRWRARG
+GPEDRVLDIALWAIPFGFVGGRLYHVFSSPDRYFGPGFDGTGDPIQILYVWNGGLGIWGA
+IALGAVGAWIACRRYGLRLTAFGDVVAPGILLAQAIGRWGNWFNQELFGGPTTLPWGLEV
+DPASPNFPAGYAPDTLFHPTFLYECLWNLAGVALLLLVDRALHLRHGLMLWSYVAWYTAG
+RTWIEMLRIDDAEMVTLFGVTQRLNVWTSLLVFVIALAFIVGILLRHRGAAAGPHAHQSV
+WRAGHAPEGDDGVAVAAGRSGSHAVGAAEDDAVRR
+>2_1664
+MGSGALTPLAAFPAPVWDGFELGPMKIHAYALCIIAGIVVALWLSGRRWADRGGPEGRVL
+DIALWAIPFGFVGGRLYHVFSSPDLYFGPGYDGTGDPIKILYVWNGGLGIWGAIALGAVG
+AWIACRRYGLRLTAFADVVAPGVLLAQAIGRWGNWFNQELFGGPTTLPWGLTVDPASPNF
+PAQYAPGTLFHPTFLYESLWNLLGVAVLLLVDRRLHLRHGAMLWSYVAWYTAGRTWIEMM
+RIDDAELVTLFGVTQRLNVWTSLLMFAIALAFLIGILLRHRGAAAGPHARQSVWRDGHGP
+VGEDVEGAGPAAAPAVRTTQGGSGSHAWDDVGA
+>3_771
+MTAALAPLAAFPAPGWDGFQLGPVKIHAYALCIILGIVLALWLAERRWRARGGPEDRVLD
+IALWAIPFGFVGGRLYHVFSSPDRYFGPGFDGTGDPIQILYVWNGGLGIWGAIALGAVGA
+WIACRRYGLRLTAFGDVVAPGILLAQAIGRWGNWFNQELFGGPTTLPWGLEVDPASPNFP
+AGYAPDTLFHPTFLYECLWNLAGVALLLLVDRALHLRHGLMLWSYVAWYTAGRTWIEMLR
+IDDAEMVTLFGVTQRLNVWTSLLVFVIALAFIVGILLRHRGAAAGPHAHQSVWRAGHAPE
+GDDGAAVAAGRSGSHAVGAAEDDAVRR
+>4_992
+MTAALAPLAAFPAPGWDGFQLGPVKIHAYALCIILGIVLALWLAERRWRARGGPEDRVLD
+IALWAIPFGFVGGRLYHVFSSPDRYFGPGFDGTGDPIQILYVWNGGLGIWGAIALGAVGA
+WIACRRYGLRLTAFGDVVAPGILLAQAIGRWGNWFNQELFGGPTTLPWGLEVDPASPNFP
+AGYAPDTLFHPTFLYECLWNLAGVALLLLVDRALHLRHGLMLWSYVAWYTAGRTWIEMLR
+IDDAEMVTLFGVTQRLNVWTSLLVFVIALAFIVGILLRHRGAAAGPHAHQSVWRAGHAPE
+GDDGAAVAAGRSGSHAVGAAEDDAVRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001268.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001268.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2a89780c673378e40564fc1b44ff191a44a9e105
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001268.fa
@@ -0,0 +1,30 @@
+>0_1787
+MLRIAVPNKGALAEAAREILQEAGYRQRRDSRELVLVDPENQVEFFYLRPRDIAVYVGQG
+TLDVGLTGRDLFRDAQVDGGAEEIMALGFGRSVFRLAAPVGAFSSEAELSGKRIATSYDG
+LLSAYLERTGLDAEVVHLDGAVESSVKLGVADAIADVVETGSTLRAAGMETFGESILDSE
+AVMIARVGARPEGLDVLLRRLKGVLVARRWVMIDYDVRRELLEQATAVTPGLESPTISPL
+RDESMVAVRSMVRKADANRAMDDLYALGARGILISAIHAIRL
+>1_1034
+MLRIAVPNKGALSESAREILTEAGYRQRRDSRELVLVDPENNVEFFYLRPRDIAVYVGQG
+TLDVGLTGRDLFCDAQVGDTAEEIMALGFGRSVFRLAAPVGSFTSAEQLAGKRIATSYDG
+LLSDYLARTGLDATVVHLDGAVESSVKLGVADAIADVVETGSTLRAAGMEVFGEPILDSE
+AVLIGRAGERPEGLDVLLRRLKGVLVARRWVMIDYDIRRDLLEAATAVTPGLESPTVSPL
+RDETMVAVRSMVRKPDANRVMDELYALGARGILISAIHAIRL
+>2_1673
+MLRIAVPNKGALSESAREILIEAGYRQRRDSRELVLVDPENNVEFFYLRPRDIAVYVGQG
+TLDVGLTGRDLFRDARVGETAEEIMALGFGKSVFRLAAPVGSFTSAEELAGRRIATSYDG
+LLTEYLAESGLDARVVHLDGAVESSVKLGVADAIADVVETGSTLRAAGMETFGEPILDSE
+AIMIARVGARPEGLDVLLRRLKGVLVARRWVMIDYDIRRDLLEQATAVTPGLESPTVSPL
+RDESMVAVRSMVRKADANRAMDDLYDLGARGILISAIHAIRL
+>3_762
+MLRIAVPNKGALSESAREILTEAGYRQRRDSRELVLVDPENNVEFFYLRPRDIAVYVGQG
+TLDVGLTGRDLFCDAQVGDTAEEIMALGFGRSVFRLAAPVGSFTSAEQLAGKRIATSYDG
+LLSDYLARTGLDATVVHLDGAVESSVKLGVADAIADVVETGSTLRAAGMEVFGEPILDSE
+AVLIGRAGERPEGLDVLLRRLKGVLVARRWVMIDYDIRRDLLEAATAVTPGLESPTVSPL
+RDETMVAVRSMVRKPDANRVMDELYALGARGILISAIHAIRL
+>4_983
+MLRIAVPNKGALSESAREILTEAGYRQRRDSRELVLVDPENNVEFFYLRPRDIAVYVGQG
+TLDVGLTGRDLFCDAQVGDTAEEIMALGFGRSVFRLAAPVGSFTSAEQLAGKRIATSYDG
+LLSDYLARTGLDATVVHLDGAVESSVKLGVADAIADVVETGSTLRAAGMEVFGEPILDSE
+AVLIGRAGERPEGLDVLLRRLKGVLVARRWVMIDYDIRRDLLEAATAVTPGLESPTVSPL
+RDETMVAVRSMVRKPDANRVMDELYALGARGILISAIHAIRL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001270.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001270.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2d144a63f78c7e6c14ffd053ff782487e2e2fbc9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001270.fa
@@ -0,0 +1,20 @@
+>0_1789
+MAVVAAQWHTEIMDGLIAGARAAAADLGLEPVLVRVPGTVELSVAAARLAEDFDAVVVLG
+VVVRGDTPHFDYVCQAVTQGVTEVSVRTGTPVGFGVLTVDTEQQARDRAGLPGSREDKGR
+ESLEAAVLTELALRDVQA
+>1_1021
+MSGAGAPTFTPDPAAASGLNVAIVAAQWHTEIMDGLIAGAQAAAADLGLEPVLVRVPGTV
+ELTVAAARLAERFDVVVVLGVVVRGDTPHFDYVCQSVTQGVTEVSVRTGVPVGFGVLTVD
+TEQQARDRAGLPGSREDKGREALEAAVLTELALRSVTPRD
+>2_1677
+MSGAGAPTLALTTLTDADRAAAGSLRVAVVAAQWHTEIMDGLIAGSRAAAADLGIDVDLV
+RVPGTVELSVAAARLAATHDVVVVLGVVVRGGTPHFDYVCQSVTQGVTEVSVRTGVPVGF
+GVLTVDTVEQARDRAGLPGSQEDKGREALEAAVLTELALRAALG
+>3_749
+MSGAGAPTFTPDPAAASGLNVAIVAAQWHTEIMDGLIAGAQAAAADLGLEPVLVRVPGTV
+ELTVAAARLAERFDVVVVLGVVVRGDTPHFDYVCQSVTQGVTEVSVRTGVPVGFGVLTVD
+TDQQARDRAGLPGSREDKGREALEAAVLTELALRSVTPRD
+>4_968
+MSGAGAPTFTPDPAAASGLNVAIVAAQWHTEIMDGLIAGAQAAAADLGLEPVLVRVPGTV
+ELTVAAARLAERFDVVVVLGVVVRGDTPHFDYVCQSVTQGVTEVSVRTGVPVGFGVLTVD
+TDQQARDRAGLPGSREDKGREALEAAVLTELALRSVTPRD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001271.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001271.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5bbf1ccdd4dd304c513ca429c46d35e6466135fa
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001271.fa
@@ -0,0 +1,43 @@
+>0_1791
+MSGAPDPMALAVGAALRGVRGANPLVGAVLTDDAGRVLAAGHHRGRGTAHAEVDALARWE
+AARAADPALAALDPAGLTLHVTLEPCDHTGSTGPCSGAILASGVGAVRYAVADPTGVDGG
+GAARLAAHGVRVSGPTGEPAALALTERWRRARDAGRPWITGHLAQSLDGHAAAADGTSRW
+ITGAASRAHAHRVRARVDAIVVGTGTVLADDPRLTVRDAAGAETGPQPVPVVQGRTPIPA
+GAALRARPETLHVPAHEPEAVLAALAARPGPWPHGGARPGHVLIEGGPRVLGAWIRAGLV
+DELMVYTAPLLLGAGRPAVAGLDVGTLADGLRWHPDPAEDGPVRALGEDVWTHLAPVPAP
+APEGPDPQEDCMFTGIVTHLGTVLALEPDPAADTARLVLDAGGALEGLPAGGSLAVDGVC
+LTALDGPGAEPGVFRADLMGQTLRMTSLGGRTPGDRVNLERCLRPTDHLDGHVVQGHVDG
+VGEVLSVTPQGAWTTVRIGLPAALARYVPAQGAIALQGVSLTVSAVSEPGADAHWFEVGL
+IPATLEATTLGALRPGDRVNLETDVLARYAERLALLPAAPAASPSAAPAEEVRP
+>1_1018
+MNAAETPSADPMDLAVGAALRGVRGANPLVGAVLTDAAGRILAVGHHRGRGTAHAEVDAL
+TRWRAARAADPALATLDPAGLTLHVTLEPCDHTGSTGPCSQAVLDAGIGALRYAVADPTG
+HDGGGAARLAAHGVHVTGPTGEAAALTLTARWREVRDAGRPWVTGHLAQSLDGHAAAADG
+TSQWITGPDSRVHAHEVRSRVDAIVVGTGTVLADDPRLTARDAAGAELAHQPVPVVQGHR
+PVPDGAALRTHPVLLHVPDHDPHAVLAALAAHPGPWPHGRRAEHVLIEGGPRVLGAWLRA
+GLVDELMVYTAPLLLGPGRAAVAGLDVATLSEGPRWHPDPAEGGPARALGVDVWTHLSPV
+PAPRLPTAPAPTRFQED
+>2_1680
+MSAPAARHDDAGRPAEPLDLAAAAALAGVRGANPLVGAVITGPDGAVLAVGHHRGRGTAH
+AEVDALNRWAAARAADPSLHVDPAACTIHVTLEPCDHTGSTGPCAGAILDAGLGAVRYAV
+ADATGTAGGGAARLTRAGLRVEGPTGHAASAALTARWRRVRDAGRPWITVHLAQSLDGRA
+AAADGTSRWITGPASRAHAHAVRARVDAVVCGTGTVAADDPRLTARDAAGEQLPVQPVPV
+VMGERDLPAGAALAARADLIHVRSHDPRAVLAALASRPGPWPHGGSRPGHVLIEGGPHVL
+GAWLAAGLVDEVFAYTAPVLLGDGLPGVAGLDVPTLAAGHRWAPDPAEDGPVRALGDDVL
+THLAPVTDPAD
+>3_746
+MSAAETPSADPMDLAVRAALRGVRGANPLVGAVLTDEAGRVLAVGHHRGRGTAHAEVDAL
+TRWRAARATDPALAALDPAGLTLHVTLEPCNHTGSTGPCSQAVLDAGVGALRYAVADPTG
+HDGGGAARLAAHGVRVTGPTGEVAALALTARWREARDAGRPWVTGHLAQSLDGHAAAADG
+TSQWITGPDSRVHAHEVRSRVDAIVVGTGTVLADDPRLTARDAAGAELAHQPVPVVQGHR
+PVPDGAALRAHPVLLHVPDHDPHAVLAALAAHPGPWPHGRRAEHVLIEGGPRVLGAWLRA
+GLVDELMVYTAPLLLGPGRAAVAGLDVATLSEGPRWHPDPAEGGPARALGDDVWTHLSPV
+PAPRLPTAPAPTRFQED
+>4_965
+MNAAETPSADPMDLAVRAALRGVRGANPLVGAVLTDEAGRVLAVGHHRGRGTAHAEVDAL
+TRWRAARATDPALAALDPAGLTLHVTLEPCDHTGSTGPCSQAVLDAGIGALRYAVADPTG
+HDGGGAARLAAHGVHVTGPTGEAAALTLTARWREVRDAGRPWVTGHLAQSLDGHAAAADG
+TSQWITGPDSRVHAHEVRSRVDAIVVGTGTVLADDPRLTARDAVGAELAHQPVPVVQGHR
+PVPDGAVLRTHPVVLEVLDHDPHAVLAALAAHPGPWPHGRRAEHVLIEGGPRVLGAWLRA
+GLVDELMVYTAPLLLGPGRAAVAGLDVATLSEGLRWHPDPAEGGPVRALGVDVWTHLSPV
+PAPRLPTAPAPTRFQED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001272.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001272.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c89631d22ab27929db172a2452d0cbdd87a8327f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001272.fa
@@ -0,0 +1,25 @@
+>0_1792
+MDWLVDAFNWTIPVAGGGLLMREVLGNVFGLASALGGMARKVWAWPVGILGNLILLTVFL
+ASLFTGADHATLLGQAGRQVMFIAVSVYGWVRWNEARRGRSEHATAITPEWAGLGGRAFL
+VLGMLIGTLALTPVFRALGSWEPVWADAWTFVGSLLATYGMARGWVEFWLVWVAVDVVGV
+PLLWSTGYYASAVMYAFYGAFTLVGFFVWLRAKDRDKPAVETLLPDGPEEHAAR
+>1_1017
+MDWLVDAFNWTIPVAGGGLLMREVLGNVFGLASALGGMARRVWAWPVGILGNLILLTVFL
+ASLFTGADHATLLGQAGRQVMFIAVSVYGWARWRQARRGHAEDAPAITPEWAGWRGRVFL
+VTAMAVGTVALTPVFRALGSWEPVWADAWTFVGSLLATYGMARGWVEFWLIWVAVDVVGV
+PLLWSTGYYASAVMYAFYGAFTLIGFFVWLRATDRDKPAVETLLPDGPEGDVAR
+>2_1681
+MQWLVDVFNWTIPVAGGGLLMREVVGNVFGLASALGGMARKVWAWPVGILGNLLLLTVFL
+ASLFNDAPHATLLGQAGRQVMFIAVSVYGWKRWRDAQRGRADHAPAITPEWAGWGNRAFL
+AVALVLGTVALTPVFRALGSWEPVWADAWTFVGSLLATYGMARGWVEFWLIWVAVDVVGV
+PLLWSSGYYASAVMYAFYGVFTLTGFFVWMRARDRDKPAVETLLPDGPAPEEAAR
+>3_745
+MDWLVDAFNWTIPVAGGGLLMREVLGNVFGLASALGGMARRVWAWPVGILGNLILLTVFL
+ASLFTGADHATLLGQAGRQVMFIAVSVYGWARWRRARRGHAEDAPAITPEWAGWRGRVFL
+VTAMAVGTVALTPVFRALGSWEPVWADAWTFVGSLLATYGMARGWVEFWLIWVAVDVVGV
+PLLWSTGYYASAVMYAFYGAFTLIGFFVWLRATDRDKPAVETLLPDGPEGDVAR
+>4_964
+MDWLVDAFNWTIPVAGGGLLMREVLGNVFGLASALGGMARRVWAWPVGILGNLILLTVFL
+ASLFTGADHATLLGQAGRQVMFIAVSVYGWVRWRQARRGHAEDAPAITPEWAGWRGRVFL
+VTAMAVGTVALTPVFRALGSWEPVWADAWTFVGSLLATYGMARGWVEFWLIWVAVDVVGV
+PLLWSTGYYASAVMYAFYGAFTLIGFFVWLRATDRDKPAVETLLPDGPEGDVAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001273.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001273.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1cfaf1d070ea876f4e61625aeb1f93b3b2e6621a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001273.fa
@@ -0,0 +1,25 @@
+>0_1793
+MSPRAPRLHPSILSADFAHLAEELGRIRGADAVHVDVMDNHFVPNLTLGLPVVEAIRRAT
+DLPLDIHLMIEDADRWAPGYAEAGAESVTFHAEASAAPVRLARELRAAGARAGMALKPAT
+PVEPYLDMLPELDMLLLMTVEPGFGGQAFLDVVLPKIRRARRALDGAAAPLALQVDGGVN
+AETIERAAEAGADVFVAGSAVFGAEDPDAAVDGLRRAAARACC
+>1_1016
+MTARPPRLHPSILSADFARLADDLARIPSADAVHVDVMDNHFVPNLTLGLPVVEAIRRAT
+DLPLDLHLMIEDADRWAPGYAEAGAESVTFHAEASAAPVRLARELRAAGAKAGMALRPAT
+AVEPYLDMLPELDMLLLMTVEPGFGGQAFLDVVLPKIRRARRALDGGPAPLALQVDGGVN
+RETIERAAEAGADVFVAGSAVFGAEDPDAALAGLRTAAARACH
+>2_1682
+MSAHPCIHPSILSADFARLADELARIPGSDAVHVDVMDGHFVPNLTLGLPVVEAIRAATD
+LPLDIHLMIEDADRWAPAYADAGAESVTFHAEAARAPIVLARSLRAAGAQAGLAVRPATP
+IEPYLDLLPELDMLLIMTVEPGFGGQSFLDVTLPKIRRARQALDGAPVPVRLQVDGGVNR
+ETILRAAEAGADVFVAGSAVFGADDPGAAIAGLRDLAAGVAPACHTR
+>3_744
+MTARPPRLHPSILSADFARLADDLARIPSADAVHVDVMDNHFVPNLTLGLPVVEAIRRAT
+DLPLDLHLMIEDADRWAPGYAEAGAESVTFHAEASAAPVRLARELRAAGAKAGMALRPAT
+AVEPYLDMLPELDMLLLMTVEPGFGGQAFLDVVLPKIRRARRALDGGPAPLALQVDGGVN
+RETIERAAEAGADVFVAGSAVFGAADPDAALVGLRTAAARACH
+>4_963
+MTARALRLHPSILSADFARLADELARIPSADAVHVDVMDNHFVPNLTLGLPVVEAIRRAT
+DLPLDLHLMIEDADRWAPGYAEAGAESVTFHAEASAAPVRLARELRAAGAKAGMALRPAT
+AVEPYLDMLPELDMLLLMTVEPGFGGQAFLDVVLPKIRRARRALDGGPAPLALQVDGGVN
+RETIERAAEAGADVFVAGSAVFGAEDPDAALAGLRTAAARACH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001275.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001275.fa
new file mode 100644
index 0000000000000000000000000000000000000000..472a7793f660d1f9428ae9ae7e1cf34c2891d17c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001275.fa
@@ -0,0 +1,40 @@
+>0_1795
+MTATTPLRVLYAGTPETAVPVLRALLDSPHEVVGVLTRPDAPIGRRRVLTPSPVAVVAEE
+AGVPVVKADRLRGPAGEPALEAVRALEPDVAVVVAYGALVPAEALALPRHGWLNLHFSAL
+PAYRGAAPVQRAVMAGEPEIAADVFQLEEGLDTGPVHARLTRAVAPDETAGQILADLAER
+GGPLVLELLGRIADGTAAPRPQEGEPSHAPKLTAADGLVDPARPAAEVAARINGVTPEPG
+AWGWLTVGEGGEPARFKLDGVAPATPADADWPADLDAAPPGALRTAGRAAWLRTADGAVR
+LGRVQPAGKKLMPAADWARGAADGAALLAGEALAAHTARLGQEAAARAARREAARETEAH
+A
+>1_1014
+MTAPTPLRVLYAGTPETAVPVLRALLDSPHEVVGVLTRPDAPVGRRRVLTPSPVAVVAEE
+ARLPVLKADRLRGPEGADALQAIRALEADVAVVVAYGALVPAEALQTPRHGWLNLHFSAL
+PAYRGAAPVQRAVMAGETEIAADVFQLEEGLDTGPVFARLTRPVAADETAGTVLTDLAER
+GGPLVIDVLDRLADGTATATPQRGEPTHAPKLTAADGLVDPARPAAEVAARINGVTPEPG
+AWGWLTADDGAAPARFKLDGVAPVRAGDDGWPSVLDAAVPGQILVAAKAAWLRTAGGAVR
+LSRVQPAGRKLMPAADWARGAAAGAALLAGEALAHHEEQARRDAAARAAARQAARNATEQ
+DEEARA
+>2_1684
+MSIPETALSPDAGSAPARSLRVLFAGTPEAAVPVLRALVGSAHEVAGVLTRTDAPVGRKR
+VLTPSAVARAAAESAPDVPVLKADRLRGPEAAEVLEAIRALEADVAVVVAYGALVPAEAL
+TIPAHGWLNLHFSHLPAYRGAAPVQRALMDGVERTGADVFQLEEGLDTGPVFARIGRDVA
+PEDTAGDLLAALAEDGGPLVLEVLDALAAGEARSVPQTGEPTHAPKLTAADGLVDAAAGT
+REVAARINGTTPEPGAWGWLVPAGEADAAPARLKLGGVVPTHPGEDGWPEAAEAAAPGAI
+VAAGGTAWLRTAGGAVRLDQVQPAGKKPMSAADWARGLTAPVRLLAGDELAAHLAALDAE
+AARRAAQQAAARAAQAGEGA
+>3_742
+MTAPTPLRVLYAGTPETAVPVLRALLDSPHEVVGVLTRPDAPVGRRRVLTPSPVAVVAEE
+ARLPVLKADRLRGPEGADALQAIRALEADVAVVVAYGALVPAEALQTPRHGWLNLHFSAL
+PAYRGAAPVQRAVMAGETEIAADVFQLEEGLDTGPVFARLTRPVAADETAGAVLTDLAER
+GGPLVIDVLDRLADGTATATPQRGEPTHAPKLTAADGLVDPARPAAEVAARINGVTPEPG
+AWGWLTADDGAAPARFKIDGVAPVRPGDDGWPTALDAAAPGQILVAAKAAWLRTTDGAVR
+LSRVQPAGRKLMPAADWARGAAPGAALLAGEALAHHEDQARQEAAARAAARQAARNATAQ
+DEEARA
+>4_961
+MTAPTPLRVLYAGTPETAVPVLRALLDSPHEVVGVLTRPDAPVGRRRVLTPSPVAVVAEE
+AGLPVLKADRLRGPEGADALQAIRVLEADVAVVVAYGALVPVEALQIPRHGWLNLHFSAL
+PAYRGAAPVQRAVMAGETEIAADVFQLEEGLDTGPVFARLTRPVAADETAGAVLTDLAER
+GGPLVIDVLDRLADGTATATPQRGEPTHAPKLTAADGLVDPARPAAEVAARINGVTPEPG
+AWGWLTADDGAAPARFKLDGVAPVSAGDDGWPSALDAAAPGQILVAAKAAWLRTAGGAVR
+LSRVQPAGRKLMPAADWARGAAAGAALLAGEALAHHEEQARREAAARAAAREAARNATAQ
+DEEARA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001276.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001276.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f2ba742ff28d6f304c34ce23f08cdc394bdf679f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001276.fa
@@ -0,0 +1,25 @@
+>0_1796
+MSVLPVRTVPDPVLRTPARPVPAGMDVRALVADMVETMHAVGGVGLAAPQVGVGLRVFVF
+DVQGVAGHVVNPVLETGEETVREPGEGCLSVPGLRYHPARAAEAVVRGVNVDGHPVEHRG
+TGLVARCLQHETDHLDGILYVDRLDGEERREARRRMRAGEVDRTARRVGAERAAAVGSVF
+AAPAAPPTPARAPRGGTR
+>1_1013
+MTVLPVRTIPDPVLRTAASPVPAGADVRALVADMIETMHAVGGVGLAAPQVGVGLRVFVF
+DVAGVAGHVVNPVLETAGQALREPGEGCLSVPGLRYHPARAAEAVVRGTDVDGNPVEHRG
+TGLLARCLQHETDHLDGILYVDRLDGEERREARRRMRAGEVDRAARRIGAARAAAVSSVF
+GAPGAPAAGTGAAR
+>2_1685
+MTVLTLRTVPDPVLRTPAAPVAAGQDVRALVEDMVETMHAVGGVGLAAPQVGVGLRVFVF
+DCAGASGHVLNPVLETFGSPVREPGEGCLSVPGLRYHPARAERAVVRGVDVDGNPVEHRG
+EGLLARCLQHETDHLDGILYVDRLDGDDRREARRRLRADAPDPEAERIRARRDALAGSVF
+GARPSVSPSAARTTPRRGAQ
+>3_741
+MTVLPVRTIPDPVLRTAASPVPAGADVRALVADMIETMHAVGGVGLAAPQVGVGLRVFVF
+DVAGVAGHVVNPVLETAGQALREPGEGCLSVPGLRYHPARAAEAVVRGTDVDGNPVEHRG
+TGLLARCLQHETDHLDGILYVDRLDGEERREARRRMRAGEVDRAARRIGAARAAAVSSVF
+GAPAVPAAGTGAAR
+>4_960
+MTVLPVRTVPDPVLRTAASPVPAGADVRALVADMIATMHAVGGVGLAAPQVGVGLRVFVF
+DVAGVAGHVVNPVLETAGQALREPGEGCLSVPGLRYHPTRAAEAVVRGTDVDGNPVEHRG
+TGLLARCLQHETDHLDGILYVDRLDGEERREARRRMRAGEVDRAARRIGAARAAAVSSVF
+GAPAVPAAGTGAAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001277.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001277.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bf961aa7f35fba7fb620801731101b8cb36dc0d6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001277.fa
@@ -0,0 +1,34 @@
+>0_1797
+MTQPRLAHQTPLGRMYARSLTGLPEVPSITTVIGMERTDLDGWIGWMAAQSVTQDPRLAE
+SVGSAARLKQVARQSADAAARYRDAAAERGDRVHDYAEQVAQRALGRPHTLAETRAKLIE
+HGEGAYADRFDEWWDLYDVRPLAAEITVWNHTVGYAGTLDLVARIGGRLCLIDYKTKGTG
+RDGRVKALDPKVVMQLTAGLKAEESLVDAEAGTWEEWRHGQAEMLLGVALGETEVAVHQA
+NPGVLPRHWHKFWALRQVWKHAQAADDAGPALRVIGPPPPSVPLHRG
+>1_1012
+MYARSLSGLPEVPSITTVIGMEKTDLDGWVGWMAAQSVTQDPRLAESVGSAARLKQVARQ
+SADAAARYRDAAAERGDRVHDYAEQVAQRALGRPHTMAEARARLIEHGEGAYADRFDEWW
+DLYDVRPIAAEITVWNHTVGYAGTLDLVARIGGRLCLIDYKTKGTGRDGRVKALDPKVVM
+QLTAGLKAEESLVDPEAGTWEEWRHGQAEMLLGVALGETEVAVHQANPGVLPRHWHKFWA
+LRQVWKHAQAVDDAGPALRVIGPPPPSVPVSAATGLQAVRAAAFGGGSHAAPAVAPDGLS
+SRPASAEGGDRVTA
+>2_1686
+MYARSLSGLPEVPSITTVIGMERTDLDGWVGWMAANAVAQDPRLGESLGSPARLRQVAKQ
+SADAAARYRDAAAERGDRVHDYAEQVALRALGRPHTMAASREELQRHGEGAYADRFDEWW
+DLYDVQPVAAEITVWNHSVGYAGTLDLVARIGGRLCLIDYKTKGTGRDGRVKALDPKVVM
+QLTAGLKAEESLVDAEAGTWEPWAHGGAEMLLGVALGETEVAVHQANNAALPRHWHKFWA
+LRQVWKHALAVDDAGPALRVIGPPPVSVPGAAGGLSAARAAAFGAPPAVAHDPGTSAPAD
+RLQP
+>3_740
+MYARSLSGLPEVPSITTVIGMEKTDLDGWVGWMAAQSVTQDPRLAESVGSAARLKQVARQ
+SADAAARYRDAAAERGDRVHDYAEQVAQRALGRPHTMAEARARLIEHGEGAYADRFDEWW
+DLYDVRPIAAEITVWNHTVGYAGTLDLVARIGGRLCLIDYKTKGTGRDGRVKALDPKVVM
+QLTAGLKAEESLVDPEAGTWEEWRHGQAEMLLGVALGETEVAVHQANPGVLPRHWHKFWA
+LRQVWKHAQAVDDAGPALRVIGPPPPSVPVSAATGLQAVRAAAFGGGSHAAPAVAPDGSS
+SRPASAEGGDRVTA
+>4_959
+MYARSLSGLPEVPSITTVIGMEKTDLDGWVGWMAAQSVTQDPRLAESVGSAARLKQVARQ
+SADAAARYRDAAAERGDRVHDYAEQVAQRALGRPHTMAEARARLIEHGEGAYADRFDEWW
+DLYDVRPIAAEITVWNHTVGYAGTLDLVARIGGRLCLIDYKTKGTGRDGRVKALDPKVVM
+QLTAGLKAEESLVDPEAGTWEEWRHGQAEMLLGVALGETEVAVHQANPGVLPRHWHKFWA
+LRQVWKHAQAVDDAGPALRVIGPPPPSVPASAATGLQAVRAAAFGGGSHAAPDVAPDGSS
+SRPASAAEGGDRVTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001284.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001284.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d698051daa5c77dbc3cb3c2dfa74fb0e0af95cde
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001284.fa
@@ -0,0 +1,65 @@
+>0_1806
+MSEPNNILLTVDGQMREVAHGITGLELFRDQSTTVVMRVDGVLWDLSREIPGGASVESVD
+ITEQDGLDVLRHSTAHVMAQAVQQLRPDAKLGIGPYITDGFYFDFDVAEPFTPEDLRTLE
+KMMQKIINSGQAFRRRVVTEDEARAEMADEPYKLELLGKKNDAATAGEGASVEVGAGEIT
+IYDNVDRKSGDAVWCDLCRGPHLPQTKLISNAFALTRSAAAYWLGNQDNKQLQRIYGTAW
+PTKADLKAYQERLAEAERRDHRRLGSELDLFSFPDELGSGLPVFHPRGGIIRKEMEDYSR
+RRHTEAGYEFVYTPHITKQHLYETSGHLDWYADGMFPPMQIDEQRDPETGEVTRQGQNYY
+LKPMNCPMHNLVFRSRGRSYRELPLRLFEFGAVYRYEKSGVVHGLTRVRGMTQDDAHIYC
+TREQMKDELTTTLNFVLDLLKDYGLDDFYLELSTRDPEKSVGSDEIWEEATRTLDEVARA
+SGLDLVPDPGGAAFYGPKISVQAKDAIGRTWQMSTIQLDFNLPERFDLEYQAPDGSRQRP
+VMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAIPVAEAFADYLGDVVKRLRAEGI
+RARLDDSSDRFPKKIRTASKEKVPFVLIAGGEDAEAGAVSFRFRDGSQDNGVPVDEAIER
+IVRAVREREATP
+>1_1005
+MSEPKNILLTVDGELREVTHGTTGLDLFREKPTTAVMRVDGLLWDLAREIPAGASVESVD
+ITEPEGLEVLRHSTAHVMAQAVQQLRPGAKLGIGPYITDGFYFDFDVDEPFTPEDLKQIS
+SLMQKIVKSGQTFRRRVVDEETARAEMAEEPYKLELLGKKDAADTAGEGASVEVGAGEIT
+IYDNVDRKTGDAVWCDLCRGPHLPSTKLIGNGFALTRSAAAYWLGNEKNKQLQRIYGTAW
+ASKDDLKAYQERLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPRGGIIRKEMEDYSR
+RRHTEAGYEFVYTPHITKQHLYEVSGHLDWYADGMFPPMHIDEVRDPETGEITRQGQNYY
+LKPMNCPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYC
+TREQMKEELTTTLNFVLDLLKDYGLNDFYLELSTKDPEKFVGSDEIWEEATRTLAEVAEA
+SGLQLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLEYQAADGTRQRP
+VMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAIPVAEAFNDYLDDVVAKLRAEGI
+RARLDDSSDRFPKKIRTAAKEKAPFVLIAGGEDREANAVSFRFRDGTQDNGVPVEEAIER
+IVKAVREREVTP
+>2_1693
+MSESNPILLTVDGEMREVTHAITGAELFKDQPTTVVMRVDGQLWDLSRELHGGEAVESVD
+ITEQDGLNVLRHSTAHVMAQAVQELRPDAKLGIGPFITDGFYFDFDVAEPFTPEDLKQLE
+KMMQRIVKSGQTFRRRVVTEDEARAEMADEPYKLELLGKKDDAEAAGEGATVEVGAGEIT
+IYDNVDRKSGDAVWCDLCRGPHLPTTKLIGNGFALTRSAAAYWLGNEKNKQLQRIYGTAW
+PTKEDLKAYQERLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPRGGIIRKEMEDYSR
+KRHAAAGYEFVYTPHITKQHLYEVSGHLDWYADGMFPPMQIDEVRDPETGQITKQGQNYY
+LKPMNCPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYC
+TREQMKDELTTTLNFVLDLLKDYGLDDFYLELSTKDPEKFVGSDEIWEEATRTLAEVAEA
+SGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLEYQAADGSRQRP
+VMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAIPVAEAFNDYLADVVATLKAEGI
+RVRLDESSDRFPKKIRTASKEKVPFVLIAGGEDAEAGAVSFRYRDGSQDNGVPVDEAVAR
+IVKAVREREVTP
+>3_727
+MSEPKNILLTVDGELREVTHGTTGLDLFREKPTTAVMRVDGLLWDLAREIPAGASVESVD
+ITEPEGLEVLRHSTAHVMAQAVQQLRPGAKLGIGPYITDGFYFDFDVDEPFTPEDLKQIS
+SLMQKIVKSGQTFRRRVVDEETARAEMADEPYKLELLGKKDAADTAGEGASVEVGAGEIT
+IYDNVDRKTGDAVWCDLCRGPHLPSTKLIGNGFALTRSAAAYWLGNEKNKQLQRIYGTAW
+ASKDDLKAYQERLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPRGGIIRKEMEDYSR
+RRHTEAGYEFVYTPHITKQHLYEVSGHLDWYADGMFPPMHIDEVRDPETGEITRQGQNYY
+LKPMNCPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYC
+TREQMKEELTTTLNFVLDLLKDYGLNDFYLELSTKDPEKFVGSDEIWEEATRTLAEVAEA
+SGLQLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLEYQAADGTRQRP
+VMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAIPVAEAFNDYLDDVVAKLRAEGI
+RARLDDSSDRFPKKIRTAAKEKAPFVLIAGGEDREAGAVSFRFRDGTQDNGVPVEEAIER
+IVKAVREREVTP
+>4_946
+MSEPKNILLTVDGELREVTHGTTGLDLFREKPTTAVMRVDGLLWDLAREIPAGASVEAVD
+ITEPEGLEVLRHSTAHVMAQAVQQLRPGAKLGIGPYITDGFYFDFDVDEPFTPEDLKQIS
+SLMQKIVKSGQTFRRRVVDEETARAEMADEPYKLELLGKKDAADTAGEGASVEVGAGEIT
+IYDNVDRKTGDAVWCDLCRGPHLPSTKLIGNGFALTRSAAAYWLGNEKNKQLQRIYGTAW
+ASKDDLKAYQERLAEAERRDHRKLGAELDLFSFPDELGSGLPVFHPRGGIIRKEMEDYSR
+RRHTEAGYEFVYTPHITKQHLYEVSGHLDWYADGMFPPMHIDEVRDPETGEITRQGQNYY
+LKPMNCPMHNLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYC
+TREQMKEELTTTLNFVLDLLKDYGLNDFYLELSTKDPEKFVGSDEIWEEATRTLAEVAEA
+SGLQLVPDPGGAAFYGPKISVQARDAIGRTWQMSTIQLDFNLPERFDLEYQAADGTRQRP
+VMIHRALFGSIERFLGVLTEHYAGAFPAWLAPEQVVAIPVAEAFNDYLDDVVAKLRAEGI
+RARLDDSSDRFPKKIRTAAKEKAPFVLIAGGEDREANAVSFRFRDGTQDNGVPVEEAIER
+IVKAVREREVTP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001285.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001285.fa
new file mode 100644
index 0000000000000000000000000000000000000000..72c91a9ca18d0733b8a772912b86de56643cefea
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001285.fa
@@ -0,0 +1,109 @@
+>0_1808
+MGLRRRARRRRGSSRVPTAANRDNPPTPELFVLVGPDADVGRHLARRRSAAGLAALRRWK
+EALPAGSLHADVVTHLSTPGRRLDAGHAVKALRTARRAGVPAVLTNAVRYAGPDGAATAD
+VLDAVRALSSLDAVHDLQPNGQGWLKPTAAMHRVAHEVASAADERAAPLLEATRRLAEAC
+VLDPEADLGWGVPRVPEAAVIGIEGPPERVLRERTYAGLAARYPRLHAGGRLTSAAEARD
+LEARAEHELGIITRLGFSSYFLTVAAVVDLIEGMGVRVAARGSGASSLVNHALRISNVDP
+VANGLIMERFLSDARSTLPDIDIDVESARRHEIYRAVFERFGAERTTLMSMQNAYRARGA
+VRDAGLALGMPEPEVDGIAKQLWRFSASSFREALERMPELGGLSRRIESGRAEGSRQLDL
+LVDLTERLDRLPRHISMHPCGVILGDAALLHRTPVQPSGMGLPMSQFDKHDMDPMGFLKL
+DILGVRMQSAIAYTLAEVERTTGERVDLEQVPLDDPATYAMIRTTHTLGCFQIESPGQRE
+LVGKLAPREFNDLTVDISLFRPGPMQSDMVRPFLEQRHGWAPARYPHPDLRPVLAETHGV
+TVFHEQVLRTMDVMTGCGLARADEHRRLLGGPQEHRVEEAFRAGALARGYSLDVIDEVWA
+TLAAFGSFGFCKAHGAAFAVPTYHSAWLKTHHPEAFMAAILEHDPGMYPARLMVAEARRM
+GIPVLPVDVNASSRHVRVEWVPWHPELDGPPAEDAGAGGGEPGDVVARPHAEGGAEADLA
+EGAGRGPGRWGIRLPLTGLSGLSEAETERLDAGRPYRSLADVRDRARPTARNLERLAQLG
+ALDCLLPAGGASRTDLVHHLELQHSATRGSGPGRAAARSRSARPRQVDGQLALDLPDTEL
+AALTPLFPDPSVAARVRTELELTALDVTAHLMDSHAPYLDALGVTRAADLLGLRTQSRVL
+VAGVRVATQTPPMRSGKRVVFLSVDDGTGCVDASFFTEAQHASGEMLFSARLLLIEGTVR
+RTGPRAVSVQAVRAWDLHRPESLPDPDYLDATRRQWREWLAADRRAAAARRRGQEDAGAP
+RLPDIPHHGTGGWPVKVALGGAGAPSPSSDARAPAGRGVSAGAGPGAAGQGAAARVGAGG
+VPADRRPIPVPHPDTWELLPTPER
+>1_1004
+MSQAAAAGRTAAPFAHLHVASAFSAHHGVSWPEDLVAAAAAADMDLLACTDRDGLYGMAK
+HVGACLRHGITPIVGVDLAVRWSEDGDAGRVVVLARGGCHGSGYRSLCELVSAAHARTTG
+GAAGGSPWASVAELAAAAAGRVPTAANRDNPSTPELFVLLGPDSDVGRHLARRRYAAGLA
+ALHRWKAALPAGSPHADVVTHLSAPGRRLDTGHAVKTLRAARQARIPAVLTNAVRYAAPD
+GAATADVLDAVRALSSLDALHDLQPNGQGWLKSTAAMHRIAHEVAFAADDRPAPLLEATR
+RLAEACALDPETDLGWGVPRVPEAAVIGIDGPPEHVLRERTRTGLLARYPHLHTGGGLPG
+TSQAARDLQDRAEHELGIITRLGFSSYFLTVAAVVDLIEGMGIRVAARGSGASSLVNHAL
+RISHVDPMANGLIMERFLSTDRSTLPDIDIDVESARRHEIYHAVVERFGAERTTLMSMQN
+AYRARGAVRDAGLALGMPEPEVDAIAKQLWRFSASNFREALQRMPELGGLSRRIESGRAE
+GDRQLDLLVDLTERLDRLPRHISMHPCGVILGDATLLHRTPVQPSGMGLPMSQFDKHDMD
+PMGFLKLDILGVRMQSAIAYTIAEVERTTGERIDLEQVPLDDPATYAMIRTTHTLGCFQI
+ESPGQRELVGKLAPREFNDLTVDISLFRPGPMQSDMVRPFLEQRHGWAPAHYPHPDLRPV
+LAETHGVTVFHEQVLRTMDVMTGCGLARADEHRRLLGGPQEHLVEEAFRTGALARGYSLD
+VIDEVWATLSAFGSFGFCKAHGAAFAVPTYHSAWLKTHHPAAFMAAILEHDPGMYPARLM
+VAEARRMGIPVLPVDVNASSRHVHVEWVPAHPEIDDGAPGRWGIRLPLTSLSGLSEAETD
+RLDAGRPYRSLADVRDRARPTARNLERLAQLGALDCLLPPGGASRTDLVHHLELQHSTTR
+GTAPGRTAPRSRSARPRQVEGQLALDLPDTELTALAPLFPDPGPAARVRTELELTALDVT
+AHLMDSHAPYLDALGVTRAKDLLGLRTQSRVLVAGVRVATQTPPMRSGKRVVFLSVDDGT
+GCVDASFFTEAQHASGEMLFSARLLLIEGTVRRTGDRAVSVQAVRAWDLHRPETLPDPDY
+LDATRQQWRDWLAADRRAAAARRSSRAGTGAQPLPDIPHHGTGGWPVKVRTDVGPAGGAR
+PGRTAPDRPAPEHTPIPVPHPETWELLPTPDR
+>2_1694
+MSAFPHLHVASAFSAHHGVSWPADLAAAAAAADMDLLACTDRDGLYGTVKHVGACLARRI
+TPIVGVDLAVRWDEDEPAGRVVVLARGGCHGTGYRALCRLVSAAHARTAGGAAGGAPWVL
+VAEVAAAAAGPIPTGANPGNPPTPELFVLVGPDSDVGRHLARRRTAAGLAALRRWRAALP
+AGATRAEVVSHLSAPGRRLDTGHAVKMLRTARTARVAPILTNAVRYAAPDGAATADVLDA
+VRALSALDAVHDLQPNGQGWLKPTAAMEALAAEIAHAADEHPAALLESTRALAEACALDP
+ETDLGWGRPRVPEASVVGTVGDPRQVLRERTRAGLAARYPHLHTGAGLPGTTQAARDLQD
+RAEQELGIIDRLGFAGYFLTVAAVVELIEGMGVRVAARGSGASSLVNHALRISHVDPMAN
+GLIMERFLSDARSTLPDIDIDVESARRHEIYRAVVDRFGAERTTLMSMQNAYRARGAVRD
+AGLVLGMEEDEVDGIAKQLWRFSASSFRDALDRMPELSSLAARIDAGRAAGRHQLDLLVD
+LTERLDRLPRHISMHPCGVILSDAALLDRTPVQPSGMGLPMSQFDKHDMDPMGFLKLDIL
+GVRMQSAIAYTLQEVERTTGERIDLEQVPLDDPATYAMIRTTHTLGCFQIESPGQRELIG
+KLEPREFNDLTVDISLFRPGPMQSDMVRPFLEHRHGWAPAHYPHPHLEPVLAETHGVTVF
+HEQVLRTLDVMTGCGLARADELRRLVGGPEEHRVETFFRTAALENGYSLDVVDEVWHTLH
+AFGSFGFCKAHGAAFAVPTYHSAWLKTHHPEAFMAAVLEHDPGMYPARLMVAEARRMGIP
+VLPVDVNASTRHVHVEWVPSHPEVDGADPTTDPATGAPGRWGIRLPLTSLSGLSAAEVDR
+LDAGRPYATLADVRDRARPTARSLERLAQLGALDSLLPAGGASRTDLVHHLELQHSATRS
+TDPGRTARRSRTARPRQVDGQLALDVPDTELTALTPLFPEPSRDAAVRTELDLTALDVTA
+HLMDSHAPYLDALGVTRAEDLLSLRSQSRVLVAGVRVATQTPPMRSGKRVVFVSVDDGTG
+CVDASFFTEAQHASGEMLFSARLLLIEGTVRRTGARAVSVQGVRAWDLHRPERLPDPDYL
+DATREQWRAWLAADRRAAAARRRGETPVGAVPDIPHHSTGGWPVKVRADVAVGRERAAVE
+RPAPAPSSRPIPVPHPETWELLPTPES
+>3_726
+MSRAAAAGRTVAPFAHLHVASAFSAHYGVSWPEDLVAAAAAADMDLLACTDRDGLYGMAK
+HVGACLRHGITPIVGVDLAVRWSEDEDAGRVVVLARGGCHGSGYRSLCELVSAAHARTTG
+GAAGGSPWASVAELAAAAAGRVPTAANRDNPPTPELFVLLGPDSDVGRHLARRRYAAGLA
+ALHRWKAALPAGSPHADVVTHLSAPGRRLDTGHAVKTLRAARQARIPAVLTNAVRYAAPD
+GAATADVLDAVRALSSLDALHDLQPNGQGWLKSTAAMHRIAHEVASAADDRPAPLLEATR
+RLAEACALDPETDLGWGVPRVPEAAVIGIDGPPEHVLRARTRTGLLARYPHLHTGGGLPG
+TSQAARDLQDRAEHELGIITRLGFSSYFLTVAAVVDLIEGMGIRVAARGSGASSLVNHAL
+RISHVDPMANGLIMERFLSTDRSTLPDIDIDVESARRHEIYHAVVERFGAERTTLMSMQN
+AYRARGAVRDAGLALGMPEPEVDAIAKQLWRFSASNFREALQRMPELGGLSRRIESGRAE
+GDRQLDLLVDLTERLDRLPRHISMHPCGVILGDAALLHRTPVQPSGMGLPMSQFDKHDMD
+PMGFLKLDILGVRMQSAIAYTIAEVERTTGERIDLEQVPLDDDATYAMIRTTHTLGCFQI
+ESPGQRELVGKLAPREFNDLTVDISLFRPGPMQSDMVRPFLEQRHGWAPAHYPHPDLRPV
+LAETHGVTVFHEQVLRTMDVMTGCGLARADEHRRLLGGPQEHLVEEAFRTGALARGYSPE
+VIDEVWATLSAFGSFGFCKAHGAAFAVPTYHSAWLKTHHPAAFMAAILEHDPGMYPARLM
+VAEARRMGIPVLPVDVNASSRHVHVEWVPAHPEVDDGAPGRWGIRLPLTSLSGLSEAETD
+RLDAGRPYRSLADVRDRARPTARNLERLAQLGALDCLLPPGGASRTDLVHHLELQHSTTR
+GTAPGRTAPRSRSARPRQVEGQMALDLPDTELTALAPLFPDPAPAARVRTELELTALDVT
+AHLMDSHAPYLDALGVTRAKDLLGLRTQSRVLVAGVRVATQTPPMRSGKRVVFLSVDDGT
+GCVDASFFTEAQHASGEMLFSARLLLIEGTVRRTGGRAVSVQAVRAWDLHRPQTLPDPDY
+LDATRQQWRDWLAADRRAAAARRSGRAGTGAQPLPDIPHHGTGGWPVKVRTDVGPAGGAR
+PGRTAPDRPAPEHTPIPVPHPETWELLPTPDR
+>4_945
+MSQAAAAGRTAAPFAHLHVASAFSAHYGVSWPEDLVAAAAAADMDLLACTDRDGLYGMAK
+HVGACLRHGITPIVGVDLAVRWSEDENAGRVVVLARGGCHGSGYRSLCELVSAAHARTTG
+GAAGGSPWASVAELAAAAAGRVPTAANRDNPPTPELFVLLGPDSDVGRHLARRRYAAGLA
+ALRRWEAALPAGSPHADVVTHLSAPGRRLDTGHAVKTLRAARQARIPAVLTNAVRYAAPD
+GAATADVLDAVRALSSLDALHDLQPNGQGWLKSTAAMHRIAHEVAFAADDRPAPLLEATR
+RLAEACALDPETDLGWGVPRVPEAAVIGIDGPPEHVLRERTRTGLLARYPHLHTGGGLPG
+TSQAARDLQDRAEHELGIITRLGFSSYFLTVAAVVDLIEGMGIRVAARGSGASSLVNHAL
+RISHVDPMANGLIMERFLSTDRSTLPDIDIDVESARRHEIYRAVVDRFGAERTTLMSMQN
+AYRARGAVRDAGLALGMPEPEVDAIAKQLWRFSASNFREALQRMPELGGLSRRIESGRAE
+GDRQLDLLVDLTERLDRLPRHISMHPCGVILGDATLLHRTPVQPSGMGLPMSQFDKHDMD
+PMGFLKLDILGVRMQSAIAYTIAEVERTTGERIDLEQVPLDDPATYAMIRTTHTLGCFQI
+ESPGQRELVGKLAPREFNDLTVDISLFRPGPMQSDMVRPFLEQRHGWAPAHYPHPDLRPV
+LAETHGVTVFHEQVLRTMDVMTGCGLARADEHRRLLGGPQEHLVEEAFRTGALARGYSLE
+VIDEVWATLSAFGSFGFCKAHGAAFAVPTYHSAWLKTHHPAAFMAAILEHDPGMYPARLM
+VAEARRMGIPVLPVDVNASSRHVHVEWVPAHPEIDDGAPGRWGIRLPLTSLSGLSEAETD
+RLDAGRPYRSLADVRDRARPTARNLERLAQLGALDCLLPPGGASRTDLVHHLELQHSTTR
+GTAPGRTAPRSRSARPRQVEGQLALDLPDTELTALAPLFPDPGPAARVRTELELTALDVT
+AHLMDSHAPYLDALGVTRAKDLLGLRTQSRVLVAGVRVATQTPPMRSGKRVVFLSVDDGT
+GCVDASFFTEAQHASGEMLFSARLLLIEGTVRRTGDRAVSVQAVRAWDLHRPETLPDPDY
+LDATRQQWRDWLAADRRAAAARRSGRAGTGAQPLPDIPHHGTGGWPVKVRTDVGPAGGAR
+PGRTAPDRPAPEHTPIPVPHPETWELLPTPDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001288.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001288.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e05e1ebfa6156aa9a1392eba82c0e19382291519
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001288.fa
@@ -0,0 +1,40 @@
+>0_1811
+MPQKVRGVVARAKDAPVTLETIVIPDPGPGEAVVDVKTCGVCHTDLHYVQGGIGDEYPYL
+LGHEATGVVSAIGEGVDHVKVGDTVILNWRAVCGECRACRKGEPKYCFNTHNATQKMTLE
+DGTELSPALGIGAFADKTLVHAKQCTKVDGVDTPEEQAAVGLLGCGIMAGIGAAINTGEV
+KRGESVAVIGCGGVGVAAIAGAKLAGATTIIAVDIDAKKLAKAQELGATHTVNSKDEDPV
+EAIRAATGGFGADVVIEAVGRPETYEQAFYARDLAGRVVLVGVPTPGMELKLPLLEVFGR
+GGALKSSWYGDCLPERDFPMLVDQYRLGRLPLDEFVTETVALDEVNEAFETMKAGDVLRS
+VVVL
+>1_996
+MSQKVRGVVAMAKDAPVTVETIVIPDPGPGEAVVDIKTCGVCHTDLHYQQGGIGDEYPYL
+LGHEATGVVSAIGEGVDHVKVGDTVILNWRAVCGECRACRKGEPKYCFNTHNATQKMTLE
+DGTELSPALGIGAFADKTLVHAKQCTQVDGVDTPKEQAAVGLLGCGIMAGIGAAINTGEV
+KLGESVAVIGCGGVGVAAIAGAKLAGATTIIAVDIDAKKLAKAEELGATHTVNSKDEDPV
+EAIRAATGGFGADVVIEAVGRPETYEQAFYARDLAGRVVLVGVPTPGMELKLPLLEVFGR
+GGALKSSWYGDCLPERDFPMLVDQYRLGRLPLDEFVTETIALDEVNEAFETMKSGDVLRS
+VVVL
+>2_1700
+MSQKVRGVVAMAKDAPVSIETIVIPDPGPGEAVVDIKTCGVCHTDLHYVQGGIGDDYPYL
+LGHEATGVVSAIGEGVTHVEVGDTVILNWRAVCGECRACKKGEPKYCFNTHNASQKMTLE
+DGTELSPALGIGAFAEKTLVHAKQCTKVDGVDSTEEQAAVGLLGCGIMAGIGAAINTGEV
+KRGESVAVIGCGGVGVAAIAGAKLAGATTIIAVDIDAKKLAKAEELGATHTVNSKDEDPV
+EAIRALTGGFGADVVIEAVGRPETYEQAFYARDLAGRVVLVGVPTPGMELQLPLLEVFGR
+GGALKSSWYGDCLPERDFPMLVDQYRLGRLPLDEFVTETIALDEVNEAFETMKSGDVLRS
+VVVL
+>3_718
+MSQKVRGVVAMAKDAPVTVETIVIPDPGPGEAVVDIKTCGVCHTDLHYQQGGIGDEYPYL
+LGHEATGVVSAIGEGVDHVKVGDTVILNWRAVCGECRACRKGEPKYCFNTHNATQKMTLE
+DGTELSPALGIGAFADKTLVHAKQCTQVDGVDTPKEQAAVGLLGCGIMAGIGAAINTGEV
+KLGESVAVIGCGGVGVAAIAGAKLAGATTIIAVDIDAKKLAKAEELGATHTVNSKDEDPV
+EAIRAATGGFGADVVIEAVGRPETYEQAFYARDLAGRVVLVGVPTPGMELKLPLPEVFGR
+GGALKSSWYGDCLPERDFPMLVDQYRLGRLPLDEFVTETIALDEVNEAFETMKSGDVLRS
+VVVL
+>4_938
+MSQKVRGVVAMAKDAPVTVETIVIPDPGPGEAVVDIKTCGVCHTDLHYQQGGIGDEYPYL
+LGHEATGVVSAIGEGVDHVKVGDTVILNWRAVCGECRACRKGEPKYCFNTHNATQKMTLE
+DGTELSPALGIGAFADKTLVHAKQCTKVDGVDTPEEQAAVGLLGCGIMAGIGAAINTGEV
+KRGESVAVIGCGGVGVAAIAGAKLAGATTIIAVDIDAKKLAKAEELGATHTVNSKDEDPV
+EAIRAATGGFGADVVIEAVGRPETYEQAFYARDLAGRVVLVGVPTPGMELQLPLLEVFGR
+GGALKSSWYGDCLPERDFPMLVDQYRLGRLPLDEFVTETIALDEVNEAFETMKSGDVLRS
+VVVL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001290.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001290.fa
new file mode 100644
index 0000000000000000000000000000000000000000..501078144d11eb1a65d9c6f1a972792e109a167f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001290.fa
@@ -0,0 +1,25 @@
+>0_1813
+MILLGGASGSGKSYLARRHGRPHLSLDAFYRPQSDDGAAGGPGPVFPRTPYGEIDWDHPG
+TWDEQAAVDAVVELLEEGATRVPDYDISTSSVRGHSTVALEPGGVIVAEGIFAERMPAAL
+DRAGVGYAAWYIDQARTTTAARRFVRDVAERRKPVPFLVQRGWSLYRTDAARRAAAVAAG
+FTPRRKREIIADLTA
+>1_994
+MTILPASPPPSVILLGGASGSGKSYLARQHGRPHLSLDAFYRPQSDDGAAGGPGPVFPRT
+PYGEIDWDHPGTWDEQAAVDAVVELLEEGATRVPDYDISTSSVRGHSTVALEPDGVIVAE
+GIFAERMPAALDRAEVHYAAWYIDQARTTTAARRFVRDVAERRKPVPFLVQRGWSLYRTD
+AARRAAAMAAGFTPRRKREIIADLT
+>2_1702
+MTILPASPPPSVILLGGASGSGKSYLARRHGRPHLSLDAFYRPQSDDGAAGGPGPVFPRT
+PYGEIDWDHPGTWDEQAAVDAVVELLEEGATRVPDYDISTSSVRGHSTVALEPGGVIVAE
+GIFAERMPAALDRAGVGYAAWYIDQARTTTAARRFVRDVAERRKPVPFLVQRGWSLYRTD
+AARRAAAVAAGFTPRRKREIIADLTA
+>3_716
+MILLGGASGSGKSYLARQHGRPHLSLDAFYRPQSDDGAAGGPGPVFPRTPYGEIDWDHPG
+TWDEQAAVDAVVELLEEGATRVPDYDISTSSVRGHSTVALEPGGVIVAEGIFAERMPAAL
+DRAGVRYAAWYIDQARTTTAARRFVRDVAERRKPVPFLVQRGWSLYRTDAARRAAAVAAG
+FTPRRKREIIADLTA
+>4_936
+MTILPASPPPSVILLGGASGSGKSYLARRHGRPHLSLDAFYRPQSDDGAAGGPGPVFPRT
+PYGEIDWDHPGTWDEQAAVDAVVELLEEGATRVPDYDISTSSVRGHSTVALEPGGVIVAE
+GIFAERMPAALDRAGVRYAAWYIDQARTTTAARRFVRDVAERRKPVPFLVQRGWSLYRTD
+AARRAAAVAAGFTPRRKREIIADLTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001294.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001294.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a939455acc1d9f03029ad0f511c7c3017f866459
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001294.fa
@@ -0,0 +1,70 @@
+>0_1823
+MTLTAPTEADLIRQAKNMPAEWQNLGYHELNAMLNLYGADGRIQFEADHAAARQYFLQHV
+NTNTVFFHDLEEKLDYLQKNDYYETETFEQYPFEFIRGLFDRAYKAKFRFPTFLGAFKFY
+TSYALKTFDGKRYLERYEDRVAVVALHLARGDQELATHLVDEMIAGRFQPATPTFLNSGK
+KQRGELVSCFLLRIEDNMESIARGINSALQLSKRGGGVALSLTNIREHGAPIKQIENQSS
+GVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDIHRFLDTKRENADEKIRIKTLSLG
+VVIPDITFQLAKKNEDMYLFSPYDVQRVYGVPFSEISVTEKYYEMVDDARIKKTKINARE
+FFQTLAEIQFESGYPYIVFEDTVNRANPIKGRITMSNLCSEILQVSEASEYNEDLTYSHI
+GQDISCNLGSMNIAKTMDSPDFGQSVETAIRALTAVSVMSDIQSVPSIAKGNSASHAIGL
+GQMNLHGYLARERVHYGSEEGVDFTNMYFYAVLFHALRASNKIAIETGERFGGFEDSKYA
+SGEFFDKYTDQEWTPATERVAGLFSDAGITLPTQEDWRELKASVMEHGIFNRNLQAVPPT
+GSISYINNSTSSIHPVASKIEIRKEGKLGRVYYPAPYLTNENLEYYEDAYEIGYEKIIDT
+YAAATQHVDQGLSLTLFFKDTATTRDLNRAQIYAWRKGIKTIYYIRLRQLALEGTEVEGC
+VSCML
+>1_985
+MTTTAPTEADLIRQAKNMPAEWQNLGYHELNAMLNLYGADGRIQFEADHAAARQYFLQHV
+NTNTVFFHDLEEKLDYLQKNDYYETETFEQYPFEFIRGLFDRAYKAKFRFPTFLGAFKFY
+TSYALKTFDGKRYLERYEDRVAVVALHLARGDQELATHLVDEMIAGRFQPATPTFLNSGK
+KQRGELVSCFLLRIEDNMESIARGINSALQLSKRGGGVALSLTNIREHGAPIKQIENQSS
+GVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDIHRFLDTKRENADEKIRIKTLSLG
+VVIPDITFQLAKKNEDMYLFSPYDVERVYGVPFSEISVTEKYYEMVDDARIKKTKINARE
+FFQTIAEIQFESGYPYVVFEDTVNAANPIKGRITMSNLCSEILQVSEASEYNEDLSYAHV
+GQDISCNLGSMNIAKTMDSPDFGRSVETAIRALTAVSVMSDIQSVPSIAKGNAASHAIGL
+GQMNLHGYLARERVHYGSEEGIDFTNMYFYAVLFHALRASNRIAIETGQRFGGFEDSKYA
+SGEFFDKYTDQEWAPATERVAELFAEAGIALPTQDDWRELKASVMEHGIFNRNLQAVPPT
+GSISYINNSTSSIHPVASKIEIRKEGKLGRVYYPAPYLTNENLEYYEDAYEIGYEKIIDT
+YAAATQHVDQGLSLTLFFKDTATTRDLNRAQIYAWTKGIKTIYYIRLRQLALEGTEVEGC
+VSCML
+>2_1712
+MTVTEADLIQQAKHMPEAWQDLGYHELNAMLNLYGSDGKIQFEADHAAARQYFLQHVNTN
+TVFFHDLEEKLEYLQEKHYYEPETFAQYAPEFVKATFDRAYKAKFRFPTFLGAFKFYTSY
+ALKTFDGKRYLERYEDRVAVVALHLAAGDEALATHLVDEMISGRFQPATPTFLNAGKAQR
+GELVSCFLLRIEDNMESIARGINSALQLSKRGGGVALSLTNVREQGAPIKHIQNQSSGVL
+PVMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIHRFLDTKRENADEKIRIKTLSLGVVI
+PDITFELAKRNEDMYLFSPYDVERVYGKAFSEISVTEKYYEMVDDARIKKTKINAREFFQ
+TLAEIQFESGYPYIVFEDTVNRANPIKGRITMSNLCSEILQVSEASEYNEDLSYAHVGQD
+ISCNLGSMNIAKTMDSPDFGRSVETAIRALTAVSVMSDIQSVPSIAKGNSASHAIGLGQM
+NLHGYLAREHVHYGSEEGVDFTNIYFYTVLFHALRASNLIAQETGQKFGGFEDSTYASGE
+FFAKYTEQEWTPATARVAELFETAGIDIPTQDDWRELQAKVMEHGLFNRNLQAVPPTGSI
+SYINNSTSSIHPVASKIEIRKEGKLGRVYYPAPYLTNENLEYYEDAYEIGYEKIIDTYAA
+ATQHVDQGLSLTLFFKDTATTRDLNRAQIYAWTKGIKTIYYIRLRQLALEGTEVEGCVSC
+ML
+>3_709
+MTTTAPTEADLIRQAKNMPAEWQNLGYHELNAMLNLYGADGRIQFEADHAAARQYFLQHV
+NTNTVFFHDLEEKLDYLQKNDYYETETFEQYPFEFIRGLFDRAYKAKFRFPTFLGAFKFY
+TSYALKTFDGKRYLERYEDRVAVVALHLARGDQELATHLVDEMIAGRFQPATPTFLNSGK
+KQRGELVSCFLLRIEDNMESIARGINSALQLSKRGGGVALSLTNIREHGAPIKQIENQSS
+GVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDIHRFLDTKRENADEKIRIKTLSLG
+VVIPDITFQLAKKNEDMYLFSPYDVERVYGVPFSEISVTEKYYEMVDDARIKKTKINARE
+FFQTIAEIQFESGYPYVVFEDTVNAANPIKGRITMSNLCSEILQVSEASEYNEDLSYAHV
+GQDISCNLGSMNIAKTMDSPDFGRSVETAIRALTAVSVMSDIQSVPSIAKGNAASHAIGL
+GQMNLHGYLARERVHYGSEEGIDFTNMYFYAVLFHALRASNRIAIETGQRFGGFEDSKYA
+SGEFFDKYTDQEWAPATERVAELFAEAGIALPTQDDWRELKASVMEHGIFNRNLQAVPPT
+GSISYINNSTSSIHPVASKIEIRKEGKLGRVYYPAPYLTNENLEYYEDAYEIGYEKIIDT
+YAAATQHVDQGLSLTLFFKDTATTRDLNRAQIYAWTKGIKTIYYIRLRQLALEGTEVEGC
+VSCML
+>4_929
+MTTTAPTEADLIRQAKNMPAEWQNLGYHELNAMLNLYGADGRIQFEADHAAARQYFLQHV
+NTNTVFFHDLEEKLDYLQKNDYYETETFEQYPFEFIRGLFDRAYKAKFRFPTFLGAFKFY
+TSYALKTFDGKRYLERYEDRVAVVALHLARGDQELATHLVDEMIAGRFQPATPTFLNSGK
+KQRGELVSCFLLRIEDNMESIARGINSALQLSKRGGGVALSLTNIREHGAPIKQIENQSS
+GVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDIHRFLDTKRENADEKIRIKTLSLG
+VVIPDITFQLAKKNEDMYLFSPYDVERVYGVPFSEISVTEKYYEMVDDARIKKTKISARE
+FFQTIAEIQFESGYPYVVFEDTVNAANPIKGRITMSNLCSEILQVSEASEYNEDLSYAHV
+GQDISCNLGSMNIAKTMDSPDFGRSVETAIRALTAVSVMSDIQSVPSIAKGNAASHAIGL
+GQMNLHGYLARERVHYGSEEGIDFTNMYFYAVLFHALRASNRIAIETGQRFGGFEDSKYA
+SGEFFDKYTDQEWAPATERVAELFAEAGIALPTQDDWRELKASVMEYGIFNRNLQAVPPT
+GSISYINNSTSSIHPVASKIEIRKEGKLGRVYYPAPYLTNENLEYYEDAYEIGYEKIIDT
+YAAATQHVDQGLSLTLFFKDTATTRDLNRAQIYAWRKGIKTIYYIRLRQLALEGTEVEGC
+VSCML
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001310.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001310.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4786b73568f9746967fd3b9b715b90a02b28ce31
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001310.fa
@@ -0,0 +1,50 @@
+>0_1850
+MAAFVDRVVLHLTAGNGGHGCVSVHREKFKPLGGPDGGNGGNGGDITLVVDSQTTTLLDY
+HHAPHRSAENGQPGMGDHRAGKHGESLVIPVPDGTVVKDEQGNIVADLVGEGASYTAAAG
+GQGGLGNAALSSVKRKAPGFALLGLPGESRDLTLEIKTVADVALVGFPSAGKSSLIAAIS
+AARPKIADYPFTTLVPNLGVVQAGEVRFTVADVPGLIPGASEGRGLGLEFLRHVERCAAL
+VHVLDCGTLESDRDPIADFEAIEAELEAYAVEPVFSQGGEGVVPLNERPRLVALNKTDLP
+DGAAMAEMVRAELEGRGLRVFDISALARDGLEALKYAMAGLVTEARERVPEPEPAAPVEV
+PRRHRRKGEHAEFTVRREERNLEPLFRIRGEKPERWVAQTDFQNDEAVGYLADRLQRVGV
+EDALFKAGATPGDAVVIGDDASGVLFDWEPTLSAGAELLAGPRGTDLRLDERTRATRAEK
+RAEQDQRRAARAATRAEMEAERRSGLWTETYDRED
+>1_963
+MAAFVDRVVLHLTAGNGGHGCVSVHREKFKPLGGPDGGDGGDGGDITLVVDSQTTTLLDY
+HHAPHRSAENGQPGMGDHREGKNGQSLVLPVPDGTVVKDEQGNIVADLVGEGATYVAAAG
+GQGGLGNAALASVKRKAPGFALLGLPGESRDLTLEIKTVADVALVGFPSAGKSSLIAALS
+AARPKIADYPFTTLVPNLGVVQAGDVRFTVADVPGLIPGASEGRGLGLEFLRHVERCAAL
+VHVLDCGSLESDRDPIADFEAIEAELEAYAVEPVFSQGGEGVVPLNERPRLIALNKTDLP
+DGAAMADMVRDELEGRGLRVFDISALAREGLDALKYAMAELVAEARSRVVEPAPAAPVEV
+PRRHRRRGERAEFTIRREERNLEPLFRVRGEKPERWVAQTDFQNDEAIGYLADRLQRAGV
+EDGLFKAGARPGDAVVIGDDVTGVVFDWEPTLSAGAELLAGPRGTDLRLDERTRATRAEK
+RAEQDARRAARAATRAEMEAERRSGLWTDTDDREG
+>2_1777
+MAAFVDRVVLHLTAGNGGHGCVSVKREKFKPLGGPDGGNGGNGGDITLVVDHQTTTLLNY
+HHAPHRSADNGQPGMGDHRAGRHGEDVVLPVPAGTVVKDADGNILADLVGEGASFVAAAG
+GQGGLGNAALSSVKRKAPGFALLGLPGEERELILEVKSVADIALVGYPSAGKSSLIAAIS
+AARPKVADYPFTTLVPNLGVVQAGDVRFTVADVPGLIPGASEGKGLGLEFLRHVERCAAL
+VHVLDCATLDPERDPLSDFEAIEAELEAYAVEPVFSQGGAGVVPLNERPRLVALNKTDLP
+DGREMADLVRAQLEERGLRVFDISALAHDGLESLKFAMAGLVEEARAREPEPEEAPVVEV
+PRRRRRGDQADFTVRREERNLEPLFRIRGDKPEKWVAQTDFQNDEAIGYLADRLQRAGVE
+DALFKAGARPGDAVVIGDDATGVVFDWEPTLSAGAELLAGPRGSDLRLEERTRATRAEKR
+AEQDQRRAARAATRAEMEAERRSGLWTGDPVEEEELD
+>3_686
+MAAFVDRVVLHLTAGNGGHGCVSVHREKFKPLGGPDGGDGGDGGDITLVVDSQTTTLLDY
+HHAPHRSAENGQPGMGDHREGKNGQSLVLPVPDGTVVKDEQGNIVADLVGEGATYVAAAG
+GQGGLGNAALASVKRKAPGFALLGLPGESRDLTLEIKTVADVALVGFPSAGKSSLIAALS
+AARPKIADYPFTTLVPNLGVVQAGDVRFTVADVPGLIPGASEGRGLGLEFLRHVERCAAL
+VHVLDCGSLESDRDPIADFEAIEAELEAYAVEPVFSQGGEGVVPLNERPRLIALNKTDLP
+DGAAMADMVRDELEGRGLRVFDISALAREGLDALKYAMAELVAEARSRVVEPAPAAPVEV
+PRRHRRRGERAEFTIRREERNLEPLFRVRGEKPERWVAQTDFQNDEAIGYLADRLQRAGV
+EDGLFKAGARPGDAVVIGDDVTGVVFDWEPTLSAGAELLAGPRGTDLRLDERTRATRAEK
+RAEQDARRAARAATRAEMEAERRSGLWTDTDDREG
+>4_906
+MAAFVDRVVLHLTAGNGGHGCVSVHREKFKPLGGPDGGDGGDGGDITLVVDSQTTTLLDY
+HHAPHRSAENGQPGMGDHREGKNGQSLVLPVPDGTVVKDEQGNIVADLVGEGATYVAAAG
+GQGGLGNAALASVKRKAPGFALLGLPGESRDLTLEIKTVADVALVGFPSAGKSSLIAALS
+AARPKIADYPFTTLVPNLGVVQAGDVRFTVADVPGLIPGASEGRGLGLEFLRHVERCAAL
+VHVLDCGSLESDRDPIADFEAIEAELEAYAVEPVFSQGGEGVVPLNERPRLIALNKTDLP
+DGAAMADMVRDELEGRGLRVFDISALAREGLDALKYAMAELVAEARSRVVEPAPAAPVEV
+PRRHRRRGERAEFTIRREERNLEPLFRVRGEKPERWVAQTDFQNDEAIGYLADRLQRAGV
+EDGLFKAGARPGDAVVIGDDVTGVVFDWEPTLSAGAELLAGPRGTDLRLDERTRATRAEK
+RAEQDARRAARAATRAEMEAERRSGLWTDTDDREG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001313.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001313.fa
new file mode 100644
index 0000000000000000000000000000000000000000..248ef9e0c4f5c41fca7e8fa6858fc9566df1a705
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001313.fa
@@ -0,0 +1,96 @@
+>0_1853
+MAANEDTTGAEERAEQTEQTTAETSAAVAGQAAAESPVEDGGTVTQAQADAAEGADAPER
+TAEAADIEDEAETDTAAEPEPDEAPGAPALQFDPTDPFAVPANVMEILRTEKSERRPARD
+ERPARGAEDEEEAPGRSRRRRRPSRDRDQAETEAGAEDEAVETAEGEQDAETAERGEGAV
+VSRRRRRRRRGDVDMELDGGEDGDPENTVTRVRAPRQALSTGSDAVQGVKGSTRLEAKRQ
+RRRDSRSGGRRRTVITEAEFLARREAVDRKMLVRQREHRIQIAVLEDGVLAEHFVSNTTQ
+DSLIGNVYVGKVQNVLPSMEAAFVDIGRGRNAVLYAGEVNWDAAQLDGKPKKIENALKSG
+DTVLVQVTKDPVGHKGARLTSQVSLPGRYLVYVPGGSMTGISRKLPDVERSRLKKILKDH
+LPQDAGVIVRTAAEGTSEQELQNDINRLRAQWEGIQEKASSTKVLAPELLYAEPDLTIKT
+VRDVFNEDFSAVLVQGEATWDNIEAYVTYVAPHLLDRLHHWVPQDHDGEDLYATHRVDEQ
+LHKALERKVYLPSGGSLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEVVRQ
+LRLRDIGGIIVIDFIDMVLEANQDLVLRRLVECLGRDRTKHQVAEVTSLGLVQMTRKRMG
+TGLVEVFSETCEHCAGRGILIHDTPVERGRSGGEPRGEGEGRRRRRRKGAGEGEQAQPAE
+STTTAGGEEVDAEDERQRRERAEAARAALHSIAKASGKVSEDEDPAEQAAPAEQAADAAE
+DQAAEAVEAARQDAAEETGEAGAQDGEGAEDEDEAPRRRRRRGRRRGRGRSEEAAEAAEA
+ASEDGSRDADAAPAGQAPAADEEEAPAADPVAQAEAAVTAVAEAEADAESGGEEREAEPA
+GDEEGARPRRARRRRGGRGRSRRGADREASTADADDEAAQPAQEPAQADAGAAGDRARAS
+RAGRVGAARAARVRPGRGRGGRRAASRPAPPPFAPRFERRCRAPGRGPGRRPGVVRPGDP
+VPRGGGRRRGDRAHRGAVHGRHRGARAPGRPRPGGGGRDGRAGGGRPRPGRAGRARPAAR
+PELRARRPPSPGAVGPVARCPRTACACRSRTPPGRHGADASRRPPPSPRPPPSRAPRRP
+>1_960
+MAANNEDTTRADERVEETAEQAVTQTAADTADGAEPERTAASDDAADPAEEPSAPTLQVD
+PTDPFAVPANLIEVLRTETTSRQRSEDEDAGESEDRAEGAVVSRRRRRRRRGEVDMELDG
+GEAGDPEHTVTRVRAPRQAVGTASDTVQSVKGSTRLEAKRQRRRDSRSGGRRRTVITEAE
+FLARREAVDRKMLVRQRDQRIQIAVLEDGVLAEHFVSHTTQDSMIGNVYLGKVQNVLPSM
+EAAFVDIGRGRNAVLYAGEVNWDAAQLDGKPRKIENALKSGDTVLVQVTKDPVGHKGARL
+TSQVSLPGRYLVYVPGGSMTGISRKLPDVERSRLKKILKDHLPQDAGVIVRTAAEGTSEQ
+ELQNDINRLRAQWEGIQEKASGTKVLAPELLYAEPDLTIKTVRDVFNEDFSAMLVQGEAT
+WDNIEAYVTYVAPHLLGRLHHWVPEDHDGEDLYATHRVDEQLHKALERKVYLPSGGSLVI
+DRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVL
+EANRDLVLRRLVECLGRDRTKHQVAEVTSLGLVQMTRKRMGTGLVEVFSETCEHCAGRGI
+LIQDTPVERGRSGGEQRGEAEGRRRRRRRGDGEGEHAHAAAATTTGAEHADSEDERQRRE
+RAEAARVALHSIAKASGKVAEDEAPAQESAPAEQAADAAEDSAAEAVEAASAGPAEAGQP
+AGTDEEETPRRRRRRGRRRSRGRAEESGDTGAEDAGSEDAARSHDDGPAESAGQTRQTEE
+EAAEPAAAAAPEHQDPVVQAEEAVAAVAEAEADAEAESPEDAAEQDDRPRRSRRRRGGRG
+RSRRGGEAASTEADADAEDHGAERATPSRHEAADADSSVAVSSEVASEPVPAEDAPAPVP
+AEDAPAPRRRRSRRASSDGVVRPAAGADASAERTADRTDAAPVEATEPSPEESTDATEVH
+EQPAAPAAVEEAVMVEPAATEPTAEPTADADQASAADAPTEAQAAPTAPVPGSPRRRSRR
+AVSSDGVHVQVQAAPGGAQGGRFTAAVAEASTPAEPQGAAPVMLGVGVKAADLARRGR
+>2_1780
+MAADESTTQDTHETAEGSTTPVEATEEETAAEVAESPAGEAAEATAAPDVRFDPTNPFAV
+PEGLLPLIEAETVERRRRRPAADPVPEGAADDAHADDEDDEDRPAVSRRRRRRRRGTVDM
+ELAGGEDGDPEDTVTRVRAPRRALSTGPEAVQGVKGSTRLEAKRQRRRESRSGGRRRTVI
+TEAEFLARRESVDRKMLVRQREHRIQIAVLEDGVLAEHFVSNTTQDSMIGNVYLGKVQNV
+LPSMEAAFVDIGRGRNAVLYAGEVDWDAAQLDGKAKKIENALKSGDTVLVQVTKDPVGHK
+GARLTSQISLPGRYLVYVPGGTMTGISRKLPDVERARLKKILKDHLPQDAGVIVRTAAEG
+TSEQELQNDINRLRVQWEGIQEKASSTKTLAPELLYAEPDLTIKTVRDVFNEDFSAMLVQ
+GEATWDSIEAYVTYVAPHLLDRLHHWVPEDHDGEDLYATHRVDEQLHKALERKVYLPSGG
+SLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEVVRQLRLRDIGGIIVIDFI
+DMVLESNQDLVLRRLVECLGRDRTKHQVAEVTSLGLVQMTRKRMGTGLVEVFSEVCEHCG
+GRGILIQDTPVERNRWGHEHRAEPEARRRNKRRRGTESGEGGPAEPTAAELTEEERLRAE
+RAAAARTALMSIAKASGKAADEEPSEEAAPRAEDAPEEAADEVRPSPAGDAEEQGESESG
+GRRRKRRGRRRGRGRGGDDAARSAEEQDAPAEHPAEAAGEPAPAEAGAPDPAETATEDAD
+ADSASDAPAAQAEADEDGRSGGRRRSRRRGGRRAESPQGSGAPASAPEASVEAEQDPEEP
+AGAAEAEEALAAEEAPASPEPAAVVTFDGEPVAVPRRRRSRRATSDGVSAPRPSGMDALE
+AAVDRRAEDAAAAAQRSPATPAATPTAAPEPAPAPVAGEGPAAAAPRRRSRRAVSADGAT
+VQVQEGAAAGGGRFTAQAAQAAPAGETAAPVMLGVGVKAADIVRGE
+>3_683
+MAANNEDTTRADERVEETAEQAVTQTAADTADGAEPERTAASDDAADPAEEPSAPTLQVD
+PTDPFAVPANLIEVLRTETTSRQRSEDEDAGESEDRAEGAVVSRRRRRRRRGEVDMELDG
+GEAGDPEHTVTRVRAPRQAVGTASDTVQSVKGSTRLEAKRQRRRDSRSGGRRRTVITEAE
+FLARREAVDRKMLVRQRDQRIQIAVLEDGVLAEHFVSHTTQDSMIGNVYLGKVQNVLPSM
+EAAFVDIGRGRNAVLYAGEVNWDAAQLDGKPRKIENALKSGDTVLVQVTKDPVGHKGARL
+TSQVSLPGRYLVYVPGGSMTGISRKLPDVERSRLKKILKDHLPQDAGVIVRTAAEGTSEQ
+ELQNDINRLRAQWEGIQEKASGTKVLAPELLYAEPDLTIKTVRDVFNEDFSAMLVQGEAT
+WDNIEAYVTYVAPHLLGRLHHWVPEDHDGEDLYATHRVDEQLHKALERKVYLPSGGSLVI
+DRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVL
+EANRDLVLRRLVECLGRDRTKHQVAEVTSLGLVQMTRKRMGTGLVEVFSETCEHCAGRGI
+LIQDTPVERGRSGGEQRGEAEGRRRRRRRGDGEGEHAHAAAATTTGAEHADSEDERQRRE
+RAEAARVALHSIAKASGKVAEDEAPAQESAPAEQAADAAEDSAAEAVEAASAGPAEAGQP
+AGTDEEETPRRRRRRGRRRSRGRAEESGDTGAEDAGSEDAARSHDDGPAESAGQTRQTEE
+EAAEPAAAAAPEHQDPVVQAEEAVAAVAEAEADAEAESPEDAAEQDDRPRRSRRRRGGRG
+RSRRGGEAASTEADADAEDHGAERATPSRHEAADADSSVAVSSEVASEPVPAEDAPAPVP
+AEDAPAPRRRRSRRASSDGVVRPAAGADASAERTADRTDAAPVEATEPSPEESTDATEVH
+EQPAAPAAVEEAVMVEPAATEPTAEPTADADQASAADAPTEAQAAPTAPVPGSPRRRSRR
+AVSSDGVHVQVQAAPGGAQGGRFTAAVAEASTPAEPQGAAPVMLGVGVKAADLARRGR
+>4_903
+MAANNEDTTRADERVEETAEQAVTQTAADTAAGAVQPERTPASDDAADAPEEPSAPTLQV
+DPTDPFAVPANLIEVLRTETTSRQRSEDEDDPDTSGRSRRRRRPSREDDRAEEGAADASA
+DAEDREDASESEDRAEGAVVSRRRRRRRRGEVDMELDGGEAGDPEHTVTRVRAPRQAVST
+ASDTVQSVKGSTRLEAKRQRRRDSRSGGRRRTVITEAEFLARREAVDRKMLVRQRDQRIQ
+IAVLEDGVLAEHFVSHTTQDSMIGNVYLGKVQNVLPSMEAAFVDIGRGRNAVLYAGEVNW
+DAAQLDGKPRKIENALKSGDTVLVQVTKDPVGHKGARLTSQVSLPGRYLVYVPGGSMTGI
+SRKLPDVERSRLKKILKDHLPQDAGVIVRTAAEGTSEQELQNDINRLRAQWEGIQEKASG
+TKVLAPELLYAEPDLTIKTVRDVFNEDFSAMLVQGEATWDNIEAYVTYVAPHLLDRLHHW
+VPEDHDGEDLYATHRVDEQLHKALERKVYLPSGGSLVIDRTEAMTVVDVNTGKFTGSGGN
+LEETVTKNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLEANRDLVLRRLVECLGRDRTKH
+QVAEVTSLGLVQMTRKRMGTGLVEVFSETCEHCAGRGIIIKDTPVERGRSGGEQRGEAEG
+RRRRRRRGNGEGEHAHAAAATTTGAEHADSEDERQRRERAEAARVALHSIAKASGKVAED
+ETPAQEPAPAEQAADAAEDSVAEAVEAASTGPAEAGQPAAADEEETPRRRRRRGRRRSRG
+RAEESGDTGAEDAGSEDAARSHDDGPAESAGQTRQTEEEAAEPAAAAAPEHQDPVVQAEE
+AVAAVAEAEADAEAESPEDAAEQGDRPRRSRRRRGGRGRSRRGGEAASTEADADAEDHGA
+ERATPSRHEAADADSSVAVSSEVASEPVPAEDAPAPVPAEDAPAPRRRRSRRASSDGVVR
+PAAGADASAERTADRTDAAPVEATEPSPEESTDATEVHEQPAAPAAVEEAVMVEPAATEP
+TAEPTADADQASAADAPTEAQAAPTAPVPGSPRRRSRRAVSSDGVHVQVQAAPGGAQGGR
+FTAAVAEASTPAEPQGAAPVMLGVGVKAADLARRGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001316.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001316.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fc33798cd20bf70670ac705500722f25b2341855
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001316.fa
@@ -0,0 +1,53 @@
+>0_1856
+MSGAPAPQTVEQVYADLLARAPENAMEPRLEPMRRVLALLGDPQHAAPVIHLTGTNGKTS
+TARMIEAVLRSYGLRTGRYTSPHLQSVTERISIDGAPVSDETFVRVWGEILPIVQAVDAE
+LEAEGRPRLTYFEAVTTLGFAVFADEPVEVVVLEVGLGGITDATNVADGAVSVVTPISLD
+HTDLLGETEAEIAEEKAGIVKPGGALVSAVQERDAAQVLLEAARAADVPFRFEGVEFGVL
+ERSLAVGGQQVSVRGLAAEYRDLFLPLHGEHQAQNLAVAVAALEMFLGGGDRPLDEELLR
+EGLAQVASPGRLEVLRTAPTLIVDAAHNPDGVRATARAVQEAFGFTRLALVVGILREKDA
+PAMLEALFRAFGDDVEDLALTQSSSPRAIPAGDLARMAVDAGWPEADVFAAESVPDALEW
+AVGRAEALETSADELASGTGGGVLVLGSVTLAAEVRALVGEPRHAGPVTVAARGLDPADL
+PRRRRPGRGGRGRPGPRDPRAARGPRRRRLPPPHRGGPMSTPQPGTGRTPEEDERFGDES
+WRPERETRAQRAWRPGTRRRRRSVRALFTSTVLMLEAVVIFFLGMMLFGMNRDQPGAVWF
+IAGYTLLAAVAVLTCALVRRPVGIAIGWAIQAVLVLSGFWEYSMFVVGALFALTWAYAVI
+KGGGMDVENAERDRLQAEWEAEHGQ
+>1_956
+MRGDAPGTVEEVYRDLLARAPENKMQPRLEPMRRVLALLGDPQHAAPVIHLTGTNGKTST
+ARMVEAVLRAYGLRTGRYTSPHLQRVTERISIDGAPVADETFVRVWGEILPIVQTVDAEL
+EAAGEVPLTYFEAVTTLGFAVFADEPVEVVVLEVGLGGVTDATNVADAVVSVVTPISLDH
+TDLLGETEAEIAEEKAGIIKPGGALVSAAQERDAAQVLLEAAQAADVPFRFEGVEFGVLE
+RSLAVGGQQVSVRGLAAEYRDLFLPLLGEHQAQNLAVAVAALEMFLGGGERPLDEELLRE
+GLSQVTSPGRLEVLRTAPTLIVDAAHNPDGVRATARAVQEAFGFTRLSLVVGILQEKDAP
+GMLAALYRAFGDDVEDLAVTQSSSARAIPAGELARMAVDAGWPEDDVYATESVPDALEWA
+VGRAEALETSADELASGTGGGVLVLGSITLAAEVRTLVGEPRHAGPVTVAARGLDPADLL
+DAVGLADADEDDLDPEILELLEDRDDAGARRRPEEDR
+>2_1802
+MSAPAEGRVPGTVEEVYADLLARAPEHRMEPRLDPVRRVLALLGDPQHAAPVIHLTGTNG
+KTSTARMIEAVLRAYGLRTGRYTSPHLERVTERISVDGEPVADEDFVRVWGEILPMVHTV
+DAELEAAGEPRLTYFEAVTVLGFAVFADAPVEVVVLEVGLGGITDATNVADGAVSVVTPI
+SLDHTDLLGDTEAEIAEEKAGIIKPGGFLVSAAQDADAAQVLLEAARAADVPFRFEGVEF
+GVLERRLAVGGQQVDVRGLADEYRELFLPLHGAHQAENLAVAVAALEAFLGGGQRPLDVE
+LLREGLAQVTSPGRLEVLRTAPTVVVDAAHNPDGVAVTARAVQEVFSFTRLALVVGVLQE
+KDARTMLEVLHREFGDLISDVALTQSASPRAIPAGDLAALAVDAGWPEDDLFITESVPDA
+LEWAVGRAEAVETSADALASGTAGGVLVLGSITLAAEVRSLLGAPAHAGPVTVAARGMDP
+ADLLAAVGLEDDDADAVDPEVLELLDDREEHTR
+>3_679
+MRGDVPGTVEEVYRDLLARAPENKMQPRLEPMRRVLALLGDPQHAAPVIHLTGTNGKTST
+ARMVEAVLRAYGLRTGRYTSPHLQRVTERISIDGAPVADETFVRVWGEILPIVQTVDAEL
+EAAGEVPLTYFEAVTTLGFAVFADEPVEVVVLEVGLGGVTDATNVADAVVSVVTPISLDH
+TDLLGETEAEIAEEKAGIIKPGGALVSAAQERDAAQVLLEAARAADVPFRFEGVEFGVLE
+RSLAVGGQQVSVRGLAAEYRDLFLPLLGEHQAQNLAVAVAALEMFLGGGERPLDEELLRE
+GLSQVTSPGRLEVLRTAPTLIVDAAHNPDGVRATARAVQEAFGFTRLSLVVGILQEKDAP
+GMLAALYRAFGDDVEDLAVTQSSSARAIPAGELARMAVDAGWPEDDVYATESVPDALEWA
+VGRAEALETSADELASGTGGGVLVLGSITLAAEVRTLVGEPRHAGPVTVAARGLDPADLL
+DAVGLADADEDDLDPEILELLEDRDDAGARRRPEEDR
+>4_899
+MRGDVPGTVEEVYRDLLARAPENKMQPRLEPMRRVLALLGDPQHAAPVIHLTGTNGKTST
+ARMVEAVLRAYGLRTGRYTSPHLQRVTERISIDGAPVADETFVRVWGEILPIVQTVDAEL
+EAAGEVPLTYFEAVTTLGFAVFADEPVEVVVLEVGLGGVTDATNVADAVVSVVTPISLDH
+TDLLGETEAEIAEEKAGIIKPGGALVSAAQERDAAQALLEAARAADVPFRFEGVEFGVLE
+RSLAVGGQQVSVRGLAAEYRDLFLPLLGEHQAQNLAVAVAALEMFLGGGERPLDEELLRE
+GLSQVTSPGRLEVLRTAPTLIVDAAHNPDGVRATARAVQEAFGFTRLSLVVGILQEKDAP
+AMLAALYRAFGDDVEDLAVTQSSSARAIPAGELVRMAVDAGWPEDDVYATESVPDALEWA
+VGRAEALETSADELASGTGGGVLVLGSITLAAEVRTLVGEPRHAGPVTVAARGLDPADLL
+DAVGLADADEDDLDPEILELLEDRDDAGARRRPEEDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001320.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001320.fa
new file mode 100644
index 0000000000000000000000000000000000000000..343fa382794e733bc86d55a71002cbc93bfa38d5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001320.fa
@@ -0,0 +1,30 @@
+>0_1862
+MTVVMEDVGKSFGGPTPVLEDVSVRIEPGEFVCLLGASGCGKSTLLNLIARLEAPTAGVV
+KAPRQGAAFMFQDAALFPWLTARGNIELALRFAGVPAAERRGRAGELLRLVHLGDAADLR
+PHQLSGGMRQRVALARALAQDRPLLLMDEPFGALDAITRDLLHVELERVWRQTGRTVVFV
+THNVAEAVRLGQRVLLLSSRPGRVVAEWDVPAAARHDAPAAAALTAAITARLGQEIRRHA
+H
+>1_950
+MTVVMEDVGKSFGGPTPVLEDVSVRIEPGEFVCLLGASGCGKSTLLNLVARLEAPTAGVV
+KTPREGAAFMFQDAALFPWLTARGNIELALRFAGVAAGERRERAGELLRLVHLDDAADLR
+PHQLSGGMRQRVALARALAQDRPLLLMDEPFAALDAITRDLLHGELERVWRQTGRTVVFV
+THNVAEAVRLGQRVLLLSSRPGRVVAEWDVPAAARHDAPAAAALTAAITARLGQEIRRHA
+H
+>2_1808
+MTVVMEDVGKSFGGPTPVLEDVSVRIEPGEFVCLLGASGCGKSTLLNLIARLEAPTAGVV
+KTPREGAAFMFQDAALFPWLTARGNIELALRFAGVPAAGRRERAGELLRLVHLGDAADLR
+PHQLSGGMRQRVALARALAQDRPLLLMDEPFAALDAITRDLLHVELERVWRQTGRTVVFV
+THNVAEAVRLGQRVLLLSSRPGRVVAEWDVPAAAHHDAPAAAALTAAITARLGQEIRRHA
+H
+>3_673
+MTVVMEDVGKSFGGPTPVLEDVSVRIEPGEFVCLLGASGCGKSTLLNIIARLEAPTAGVV
+KTPREGAAFMFQDAALFPWLTARGNIELALRFAGVAAGERRERAGELLRLVHLDDAADLR
+PHQLSGGMRQRVALARALAQDRPLLLMDEPFAALDAITRDLLHGELERVWRQTGRTVVFV
+THNVAEAVRLGQRVLLLSSRPGRVVAEWDVPAAARHDAPAAAALTAAITARLGQEIRRHA
+H
+>4_893
+MTVVMEDVGKSFGGPTPVLEDVSVRIEPGEFVCLLGASGCGKSTLLNLVARLEAPTAGVV
+KTPREGAAFMFQDAALFPWLTARGNIELALRFAGVAAGERRERAGELLRLVHLDDAADLR
+PHQLSGGMRQRVALARALAQDRPLLLMDEPFAALDAITRDLLHGELERVWRQTGRTVVFV
+THNVAEAVRLGQRVLLLSSRPGRVVAEWDVPAAARHDAPAAAALTAAITARLGQEIRRHA
+H
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001321.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001321.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2e69ad9abcdde161296ca393866d6f820a9dba30
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001321.fa
@@ -0,0 +1,45 @@
+>0_1863
+MSTALLDRHAPAGTLFRLATAGSVDDGKSTLVGRLLHDSKAVLADQLEAVARTSAERGFG
+GAEGGLDLALLTDGLRAEREQGITIDVAYRYFATDRRTFVLADCPGHVQYTRNTVTGAST
+ADAVVLLVDARSGVVEQTRRHLSVVALLRVPHVIVAVNKIDLVDYSEEVFTAIADDVRRV
+ARELGLSDAVSVPVSALQGDNVVTRSERTDWYTGPTLMELLESLPGADAEDDAAASFRFP
+VQLVLRPQGALAPGLDPEVFRDYRGYAGQVVAGTVRPGDAVAVLTPGQPARTTTVVGVDA
+AGESLEEASSPQSVVLRLADEVDVARGDTIAAADTAPRPTAEVAAALCWLSAAPLRVGQQ
+VLVKHGTAVVRALVQEVAGRLDLDTLRLDPAETLGLNDIGQVRLHLAAPLPVEPYAVHRR
+TGAFLVIDPQDGATLAAGMVRGGDEA
+>1_949
+MSTALLDRHAPAGTLFRLATAGSVDDGKSTLVGRLLHDSKAVLADQLEAVARTSAERGFG
+GAEGGLDLALLTDGLRAEREQGITIDVAYRYFATDRRTFVLADCPGHVQYTRNTVTGAST
+ADAVVLLVDARKGVVEQTRRHLSVVALLRVPHVIVAVNKIDLVDYAEEVFTAIAEDVRRV
+ARELGLSDAVSVPVSALQGDNVVTRSERTDWYTGPTLMELLESLPGADAEDDAAASFRFP
+VQLVVRPQGALAPGLDPEVFRDYRGYAGQVVAGTVRPGDAVAVLTPGQPARTTTVVGVDA
+AGESLEEASSPQSVVLRLADEVDVARGDTIAAADTAPRPTAEVAAALCWLSAAPLRVGQQ
+VLVKHGTAVVRALVQEVAGRLDLDTLRLDPAETLGLNDIGQVRLHLAAPLPVEPYAVHRR
+TGAFLVIDPHDGATLAAGMVRGGDEA
+>2_1809
+MSTALLDRHAPAGTLFRLATAGSVDDGKSTLVGRLLHDSKAVLADQLEAVARTSAERGFG
+GAEGGLDLALLTDGLRAEREQGITIDVAYRYFATDRRTFVLADCPGHVQYTRNTVTGAST
+ADAVVLLVDARKGVVEQTRRHLSVVALLRVPQVIVAVNKIDLVDYSEEVFTAIAEDVRRV
+ARELGLSDAVSVPVSALQGDNVVTRSERTDWYTGPTLMELLESLPGADAEDDAAASFRFP
+VQLVVRPQGALAPGLDPEVFRDYRGYAGQVVAGTVRPGDAVAVLTPGQPARTTTVVGVDA
+AGESLEEASSPQSVVLRLADEVDVARGDTIAAADTAPRPTAEVAAALCWLSAAPLRVGQQ
+VLVKHGTAVVRALVQEVAGRLDLDTLRLDPAETLGLNDIGQVRLHLAAPLPVEPYAVHRR
+TGAFLVIDPQDGATLAAGMVRGGDEA
+>3_672
+MSTALLDRRAPAGTLFRLATAGSVDDGKSTLVGRLLHDSKAVLADQLEAVARTSAERGFG
+GAEGGLDLALLTDGLRAEREQGITIDVAYRYFATDRRTFVLADCPGHVQYTRNTVTGAST
+ADAVVLLVDARKGVVEQTRRHLSVVALLRVPHVIVAVNKIDLVDYAEEVFTAIAEDVRRV
+ARELGLSDAVSVPVSALQGDNVVTRSERTDWYTGPTLMELLESLPGADAEDDAAASFRFP
+VQLVVRPQGALAPGLDPEVFRDYRGYAGQVVAGTVRPGDAVAVLTPGQPVRTTTVVGVDA
+AGESLEEASSPQSVVLRLADEVDVARGDTIAAADTAPRPTAEVAAALCWLSAAPLRVGQQ
+VLVKHGTAVVRALVQEVAGRLDLDTLRLDPAETLGLNDIGQVRLHLAAPLPVEPYAVHRR
+TGAFLVIDPHDGATLAAGMVRGGDEA
+>4_892
+MSTALLDRHAPAGTLFRLATAGSVDDGKSTLVGRLLHDSKAVLADQLEAVARTSAERGFG
+GAEGGLDLALLTDGLRAEREQGITIDVAYRYFATDRRTFVLADCPGHVQYTRNTVTGAST
+ADAVVLLVDARKGVVEQTRRHLSVVALLRVPHVIVAVNKIDLVDYAEEVFTAIAEDVRRV
+ARELGLSDAVSVPVSALQGDNVVTRSERTDWYTGPTLMELLESLPGADAEDDAAASFRFP
+VQLVVRPQGALAPGLDPEVFRDYRGYAGQVVAGTVRPGDAVAVLTPGQPARTTTVVGVDA
+AGESLEEASSPQSVVLRLADEVDVARGDTIAAADTAPRPTAEVAAALCWLSAAPLRVGQQ
+VLVKHGTAVVRALVQEVAGRLDLDTLRLDPAETLGLNDIGQVRLHLAAPLPVEPYAVHRR
+TGAFLVIDPHDGATLAAGMVRGGDEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001324.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001324.fa
new file mode 100644
index 0000000000000000000000000000000000000000..baf0df36b1b9081c84867faa88013d99e4c7c9f8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001324.fa
@@ -0,0 +1,48 @@
+>0_1866
+MVLDVEGDRVDAVVAGLKELGLDPEPSVFRRSTIACTGLEFCKLAIVDTKDTATAAIAQL
+EERLADLADRLPERLSLHVNGCPNSCARIQTADIGLKGQLLPDDDGGQTPGFQIHLGGGL
+ASVDRAEAGLGRSVRGLKVRADGLVDYVERLVRRYDEQREPGETFARWAHRVDEEALR
+>1_946
+MTQVNETSRPARTPRRPSAKPHGQWKVDGTAPLNHNEEFKQQDDGLNVRERIEQVYAHEG
+FDSIPSDDLHGRFRWWGLYTQRRQGIDGGKTATLEPHELEDRYFMLRVRIDGGDLTTEQL
+RVIGGISTDFGRDTADITDRQNVQLHWIRVEDVPEIWRRLESVGLSTTEACGDVPRVILG
+SPVAGIAADEIIDPTPVIREIADRWIGDLEISNLPRKFKTAITGHPSQDVVHEINDVSLI
+GVVHPELGPGYDLWVGGGLSTKARLADRIGAFVSAERAPEVWHAVVSIFRDYGYRRLRNK
+ARMKYLLEDWGPERFRTVLEEEYLGYALPDGPAPAPPTRPGDHVGVHEQKDGRFYIGAAP
+VVGRSSGTTLTALADLLEAHGSTRLRTTPHQKIVVLDVERDRVDAVVAGLKELGLDPEPS
+VFRRSTIACTGLEFCKLAIVDTKDTATAAIAQLEERLADLADRLPERLSLHVNGCPNSCA
+RIQTADIGLKGQLLPDDDGGQTPGFQVHLGGGLASVDRAEAGLGRSVRGLKVRADGLVDY
+VERVVRRYDEQREPGETFARWAHRVDEEALR
+>2_1812
+MTQVNETSRPARTPRRPSAKPHGQWKVDGTAPLNHNEEFKQQDDGLNVRERIEQVYAREG
+FDSIPSDDLHGRFRWWGLYTQRKQGIDGGKTATLEPHELEDRYFMLRVRIDGGDLTTEQL
+RVIGGISTDFGRDTADITDRQNVQLHWIRVEDVPEIWRRLESVGLSTTEACGDVPRVILG
+SPVAGIAADEIIDPTPVIREIADRWIGDLEVSNLPRKFKTAITGHPSQDVVHEINDVSLI
+GVVHPELGPGYDLWVGGGLSTKARLADRIGAFVSAERAPEVWHAVVSIFRDYGYRRLRNK
+ARMKYLLEDWGPERFRTVLEEEYLGYALPDGPAPAPPTRPGDHVGVHEQKDGRFYIGAAP
+VVGRSSGTTLTALADLLEAHGSTRLRTTPHQKIVVLDVERDRVDAVVAGLKELGLDPEPS
+VFRRSTIACTGLEFCKLAIVDTKDTATAAIAQLEERLADLADRLPERLSLHVNGCPNSCA
+RIQTADIGLKGQLLPDDDGGQTPGFQVHLGGGLASVDRAEAGLGRSVRGLKVRADGLVDY
+VERLVRRYDEQREPGETFARWAHRVDEEALR
+>3_669
+MTQVNETSRPARTPRRPSAKPHGQWKVDGTTPLNHNEEFKQQDDGLNVRERIEQVYAREG
+FDSIPSDDLHGRFRWWGLYTQRRQGIDGGKTATLEPHELEDRYFMLRVRIDGGDLTTEQL
+RVIGGISTDFGRDTADITDRQNVQLHWIRVEDVPEIWRRLESVGLSTTEACGDVPRVILG
+SPVAGIAADEIIDPTPVIREIADRWIGDLEVSNLPRKFKTAITGHPSQDVVHEINDVSLI
+GVVHPELGPGYDLWVGGGLSTKARLADRIGAFVSAERAPEVWHAVVSIFRDYGYRRLRNK
+ARMKYLLEDWGPERFRTVLEEEYLGYALPDGPAPAPPTRPGDHVGVHEQKDGRFYIGAAP
+VVGRSSGTTLTALADLLEAHGSTRLRTTPHQKIVVLDVERDRVDAVVAGLKELGLDPEPS
+VFRRSTIACTGLEFCKLAIVDTKDTATAAIAQLEERLADLADRLPERLSLHVNGCPNSCA
+RIQTADIGLKGQLLPDDDGGQTPGFQVHLGGGLASVDRAEAGLGRSVRGLKVRADGLVDY
+VERLVRRYDEQREPGETFARWAHRVDEEALR
+>4_889
+MTQVNETSRPARTPRRPSAKPHGQWKVDGTAPLNHNEEFKQQDDGLNVRERIEQVYAHEG
+FDSIPSDDLHGRFRWWGLYTQRRQGIDGGKTATLEPHELEDRYFMLRVRIDGGDLTTEQL
+RVIGGISTDFGRDTADITDRQNVQLHWIRVEDVPEIWRRLESVGLSTTEACGDVPRVILG
+SPVAGIAADEIIDPTPVIREIADRWIGDLEISNLPRKFKTAITGHPSQDVVHEINDVSLI
+GVVHPELGPGYDLWVGGGLSTKARLADRIGAFVSAERAPEVWHAVVSIFRDYGYRRLRNK
+ARMKYLLEDWGPERFRTVLEEEYLGYALPDGPAPAPPTRPGDHVGVHEQKDGRFYIGAAP
+VVGRSSGTTLTALADLLEAHGSTRLRTTPHQKIVVLDVERDRVDAVVAGLKELGLDPEPS
+VFRRSTIACTGLEFCKLAIVDTKDTATAAIAQLEERLADLADRLPERLSLHVNGCPNSCA
+RIQTADIGLKGQLLPDDDGGQTPGFQVHLGGGLASVDRAEAGLGRSVRGLKVRADGLVDY
+VERVVRRYDEQREPGETFARWAHRVDEEALR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001325.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001325.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5251f6fad4715d11039e8f97640ca92447c29d96
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001325.fa
@@ -0,0 +1,30 @@
+>0_1867
+MSAPVLHVIACAHGTHDAAGRVVIDGLRADLAALLDAEGPGAQVHEAYVDVQSPSLDEVV
+AALPPGEPAVIVPLLLSLGHHVHHDIHHAAAARPDTIAAAPLAGAGDDVEPRLVAVLAER
+VAQAVPAGEAATSEVILAAAGTRAADGQAQVHALAAALARATGLPVTAAFGAAATPPVPD
+AVSRVRATGRRAVAAAHLLAPGYFHDRLGESGADAVTDPLLPHPLVARIALDRLRSALAE
+APRGAAGGR
+>1_945
+MSAPVLHVIACAHGTHDAAGRDVIDGLRADLAALLAAEGPGAQVHEAYVDVQSPSLDEVV
+AALPPGEPAVIVPLLLSLGHHVHHDIHHAAAARPGTIAAAPLAGAGDDVEPRLVTVLAER
+VARAVPAGEAATSDVILAAAGTRAADGQAQVHALAGALARATGLPVTAAFGAAATPRVPD
+AVARVHAAGRRAVVAAHLLAPGYFHDRLGEAGADAVTDPLLPHPLVARIALDRLRSALVE
+APRGAAGGR
+>2_1813
+MSAPVLHVIACAHGTHDAAGRVVIDGLRADLAALLDAEGPGAQVHEAYVDVQSPSLDEVV
+AALPPGEPAVIVPLLLSLGHHVHHDIHHAAAARPDTIAAAPLAGAEDDVEPRLVTVLAER
+VAQAVPAGEAATSDIILAAAGTRAADGQAQVHALAAALARATGLPVTAAFGAAATPRVPD
+AVARVRATGRRAVVAAHLLAPGYFHDRLGESGADAVTDPLLPHPLVARIALDRLRSALAE
+APRGAAGGR
+>3_668
+MSAPVLHVIACAHGTHDAAGRDVIDGLRADLAALLAAEGPGAQVHEAYVDVQSPSLDEVV
+AALPPGEPAVIVPLLLSLGHHVHHDIHHAAAARPGTIAAAPLAGAGDDVEPRLVTVLAER
+VAQAVPAGEAATSDIILAAAGTRAADGQAQVHALAGALARATGLPVTAAFGAAATPRVPD
+AVSRVRAAGRRAVVAAHLLAPGHFHDRLGESGADAVTDPLLPHPLVARIALDRLRSALAE
+APRGAAGGR
+>4_888
+MSAPVLHVIACAHGTHDAAGRDVIDGLRADLAALLAAEGPGAQVHEAYVDVQSPSLDEVV
+AALPPGEPAVIVPLLLSLGHHVHHDIHHAAAARPGTIAAAPLAGAGDDVEPRLVTVLAER
+VARAVPAGEAATSDVILAAAGTRAADGQAQVHALAGALARATGLPVTAAFGAAATPRVPD
+AVARVHAAGRRAVVAAHLLAPGYFHDRLGEAGADAVTDPLLPHPLVARIALDRLRSALVE
+APRGAAGGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001334.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001334.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e35a0cbd12be728e810c185cf7a2e92c73db9858
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001334.fa
@@ -0,0 +1,31 @@
+>0_1877
+MPRSRTPRPALRALAGALPRRRRLPLRGTAVLITGGASGIGRLMALGAARRGAARVVVWD
+LDLSAAEAVAAEARALGAEAVAERVDVTDAAAVEAAAARAGAVDVAVNNAGVVTGARLED
+ATEEGIRRTFEVNALAPYWLTRAVLPGMKARDRGAVVVIASAAGLVGVARQTDYSATKHA
+AVGFAESLSAELRKDGSAVTALAVCPFYIDTGMFDGVRSRIPWLLPVLRQEEVAEQVLDA
+VEAGRTRLPLPRAVGLLAPLRALPTPVFDRAMDVMGVNDTMDGFTGRRPAVDVPAPDPRV
+FAPDGAAR
+>1_936
+MMHGSRPALRRAASALAGRRPLSLRGATVLVTGGASGIGRLIALGAARRGAGRVVVWDLD
+LQGAEAVAAEIRSQGADAQAERVDVTDAAAVEAAAARAGEVDVAVNNAGVVTGVRLEDAT
+EEGIRRTFEVNALAPYWLTRAVLPGMRARDRGAVVTVASAAGLVGVARQTDYSATKHAAV
+GFAESLAAELRKDGSRVTSLAVCPFYIDTGMFAGVRSRVPWLLPVLDPRHVAQEVLDAVE
+AGRTRLLLPRAVGLIAPLRALPAPVFDRAMDVLGVNATMDGFTGRRSRLFAGRETAR
+>2_1823
+MTPILNRLRGRRPLPLAGRAVLITGAGSGIGRLMALEAARRGAAVVHVWDRDDAAARTVA
+AEVAALGARGEAACVDVTDTAAVEAAAARAEAVDVLVNNAGVVTGTPLLETTEEGIRRTF
+EVNALAGYWTTRALLPGMLERGRGAVVTVASAAGLVGVARQTDYSASKHAAVGFAESLRA
+ELRRADAPVTSLVVCPFYISTGMFAGVRTKVPALLPILEPEAVAAQVVDAVEAGRERLVL
+PPAVQLIAPLRALPVPAFDRVMDVLGVNRAMDGFTGRR
+>3_659
+MHGSRPALRRAASALAGRRPLPLHGATVLVTGGASGIGRLIALGAAHRGAGRVVVWDLDL
+QGVEAVAAEIRSQGADARAERVDVTDAAAVEAAAAGAGEVDVAVNNAGVVTGAPLEDATE
+EGIRRTFEVNALAPYWLTRAVLPGMRARDRGAVVTVASAAGLVGVARQTDYSATKHAAVG
+FAESLAAELRKDGSRVTSLAVCPFYIDTGMFAGVRSRVPWLLPVLDPHHVAQEVLDAVEA
+GRTRLLLPRAVGLIAPLRALPAPVFDRAMDVLGVNATMDGFTGRRSRLFAGRETAR
+>4_879
+MMHGSRPALRRAASALAGRRPLSLRGATVLVTGGASGIGRLIALGAARRGAGRVVVWDLD
+LQGAEAVAAEIRSQGADAQAERVDVTDAAAVEAAAARAGEVDVAVNNAGVVTGVRLEDAT
+EEGIRRTFEVNALAPYWLTRAVLPGMRARDRGAVVTVASAAGLVGVARQTDYSATKHAAV
+GFAESLAAELRKDGSRVTSLAVCPFYIDTGMFAGVRSRVPWLLPVLDPRHVAQEVLDAVE
+AGRTRLLLPRAVGLIAPLRALPAPVFDLAMDVLGVNATMDGFTGRRSRLFAGRETAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001341.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001341.fa
new file mode 100644
index 0000000000000000000000000000000000000000..73695ac0754f9bd8adf2900bdcf94415ce6081ae
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001341.fa
@@ -0,0 +1,50 @@
+>0_1887
+MTRREGLHLGILLALASALAIVHSFLRYGIYEAKGYDLGIFDQVVRQYALFNAPLSSVKG
+VDFNILGDHFHPILALLAPFYWIWPDPRMLGIVMALALAAAAVPVYLFTRRRTGHAVSLV
+AVAALMLSWPFQAMVNWDFHEVTLGVPLMAWLVWALDGQRPWLATVLAAVLLTVREDMGV
+TLIAVALVMALRRFWPQAALVAVLGVLGYWFATSVVIPHYSPTGDFGYWQFQALGPDMGS
+SILTILTRPWEAAAALVDHPLKAALWLLHLVPLLFLPLLSPLTLMALPILLSRLWNDRLN
+VWAPVYQYDAILAPLLLMAALEGAVRLSDLLARRRRPRPAGTGAGSHASPPTRRLPAVVA
+STALATGLVGTAFFPQVFPYHRTLTGDMTMTQHARDLDHAVSLIPDGVCVEAADNAVPHL
+TARTYVGLHGDIGDELATWMIVDTSVAELGGWDPLTPDQALDRAERLGFETVWERGDVVV
+LRHPDRAVSPTCTQYLQHR
+>1_925
+MTRREGVQLAALLVAAAALYVTHSFLRYATYEAKGYDLGIFDQVVRQYALFNAPLSSVKG
+VDFHILGDHFHPILALLAPFYWVWPDPRMLGVVMALALAASAVPVYLFARRRAGHGVALA
+AVAALLLSWPFQAMVNWDFHEVTLGVPILAWLVWALDGQRAWLATGLAALLLTVREDMGV
+TLLAVALVMAIRRFWPQAAVTAVLGVLGYWFATSVVIPHYSPTGAFGYWQFTALGPDMRS
+SVLFLLTQPWNAVAVLFDHPLKVALWLLHFVPLLFLPVLSPLTLMALPILLSRLFNDRLN
+VWAPVYQYDAILAPLLLMAALEAAHRLAGRRDTLRRLPAVLVSAALAAGLIGTAFFPQVY
+PLHRTIAGDMTMTQHARDLDHAVGLIPDGVCVEAADNAVPHLTARTHVGLHGDIGDELAT
+WMIVDTSVPELGGWDPLTPEQALARAERLGFERVWSAGDVVVLHHPDRAVSPTCTTYLEH
+R
+>2_1837
+MPARRFPGQDRVRTWLHAPRPAVPAVAVTRRQGLHLGLVLLAFAALSITHSFLRFATYEA
+KGYDLGIFDQVVRQYALFNAPLSSVKGVDFNILGDHFHPILALLAPTYWIWPDPRMLGII
+MALALCAAAVAVYLTARRRVSHGWSLAAAGVVLFSWPFQAMVNWDFHEVTLGVPIMAWLV
+WALDGERPWLALGLGTALLTVREDMGVTVCALAVVFALRRRWVQAGLALVLGLAGYWFAT
+SVAIPHFSPTGGFGYWQFQALGPDMGSSLLTILTRPWEAVAALFDHPLKLALWLLHLVPL
+LFLPVLSPLTLLALPILLSRLWNDRLNVWAPVYQYDAILAPILLLAALEAATGLAARFPR
+VRRLPQVLLAWAGAVTLAGTAFLPQVFPFHRTLTGQMTTTQHARDLDQAVGMIPDGVCVE
+AADNAVPHLTDRTHVGLHGDIGDDLATWMIVDTSVTELGGWDPLTPDQALERARRLGFER
+VWSQGDVVVLHHPTRPVSATCTDYLRHR
+>3_647
+MTRREGVQLAALLVAAAALYVTHSFLRYATYEAKGYDLGIFDQVVRQYALFNAPLSSVKG
+VDFHILGDHFHPILALLAPFYWVWPDPRMLGVVMALALAASAVPVYLFARRRTGHGVALA
+AVAALLLSWPFQAMVNWDFHEVTLGVPILAWLVWALDGQRAWLATGLAALLLTVREDMGV
+TLLAVALVMAIRRFWPQAAVTAVLGVLGYWFATSVVIPHYSPTGAFGYWQFTALGPDMRS
+SVLFLLTQPWNAVAVLFDHPLKVALWLLHFVPLLFLPVLSPLTLMALPILLSRLFNDRLN
+VWAPVYQYDAILAPLLLMAALEAAHRLAGRRDALRRLPAVLVSTALAAGLIGTAFFPQVY
+PLHRTIVGDMTMTQHARDLDHAVALIPDGVCVEAADNAVPHLTARTYVGLHGDIGDELAT
+WMIVDTSVPELGGWDPLTPEQALARAERLGFERVWSAGDVVVLHHPDRAVSPTCTTYLEH
+R
+>4_871
+MTRREGVQLAALLVAAAALYVTHSFLRYATYEAKGYDLGIFDQVVRQYALFNAPLSSVKG
+VDFHILGDHFHPILALLAPFYWVWPDPRMLGVVMALALAASAVPVYLFARRRTGHGVALA
+AVAALLLSWPFQAMVNWDFHEVTLGVPILAWLVWALDGQRAWLATGLAALLLTVREDMGV
+TLLAVALVMAIRRFWPQAAVTAVLGVLGYWFATSVVIPHYSPTGAFGYWQFTALGPDMRS
+SVLFLLTQPWNAVAVLFDHPLKVALWLLHFVPLLFLPVLSPLTLMALPILLSRLFNDRLN
+VWAPVYQYDAILAPLLLMAALEAAHRLAGRRDTLRRLPAVLVSTALAAGLIGTAFFPQVY
+PLHRTIVGDMTMTQHARDLDHAVALIPDGVCVEAADNAVPHLTARTHVGLHGDIGDELAT
+WMIVDTSVPELGGWDPLTPEQALARAERLGFERVWSARDVVVLHHPDRAVSPTCTTYLEH
+R
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001342.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001342.fa
new file mode 100644
index 0000000000000000000000000000000000000000..771eb55593373a49bbf81a3af4d3be3fefb3e6c0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001342.fa
@@ -0,0 +1,55 @@
+>0_1888
+MRRAGLAPTPAPPGLPERETAPPEPAVAVRQGTWAAVLIMVGSWGVGWLPMTPDSVFSGS
+TLLNPLRVNLPGVLASTLLLASGSLLLVRAWLVLGRSLRGRWEGHGRLVSRAAWQWSAPL
+MLALPIFSRDVFSYLQQGRLFALGLDPYTQGVSALPGWFMQGADSIWAESPSPYGPLFLL
+CAEAIWRVTGGQIELSVTAFRLLALAGLALCLWAVPRLAEAAGRCGAWAAWVCVANPLFL
+LYMIAGVHNDALMSGLMLAGIVLMVRVPRRRLHALWGIVLIALSVAIKPLTALVLPFVGL
+LLPTGWDRFRRADPGLRRRDRLGPWITTAAIALAVLTILGAGSRLWFGWVPAMLTSGDAA
+FPYAPVGVLGLLLGAAADGLAGLPARAVAGGFYTLMTLAALGFGAWLALRRRAPEPVSAA
+AAVLFVAVVTAPIVQPWYLLWVLPLLACALRPLPWGADHPRWLGWVTALAVLLLTGVGVV
+DQISVAQWLPVAAVRALTAVVVLAGIAWIVVRDPATAPLFPGRRRPPREVVEPREAVGPR
+EPGAPPGPPTAAPDAEFPPDALAADPDRRRRPAPDRRPARPGETVTSQPRRPADTRTGSA
+AAPPSPAALRPGPRWIGILVGLTAVAAVVGLLTKQWCRVNGWAAPGVHVHMCYSDFAQLF
+PTRGLSDGYFPFYTPLPPEQWMEYPALLAVVAGVTMWLVPDSGDLHERTVMYFDVNALGV
+VLCWVVLVIATAYTARGRSRDALLVALAPGIILTSMLNWDLWAVMLAALALWAWTAHRPT
+LAGLLIGLGTALKLYPLFFFGAILVLALRTGRWRGLITSLAAGVAAWLAVNVPFMLTAFD
+QWSRFYTFSGDRAVSFSSTWLSLAWTGWSGETFSTLQNGMFALFCAGIAWLGLSARHRPR
+MAQLCFLIVASFLLWGKVYSPQFVMWLIPLVVLATPRWRAFWIWQAVEVYHWGGVWMESA
+RITSGGAFADGAWWITAWYASGIVAHIVALVWLMVTVVKDILDPSRDPVRRTALAQGAPT
+IAPGVAEDPHAGVYAGAPDRLVLPPAGRGLQPAEGATSGS
+>1_924
+MTSHPRSPAPSRPSGRWVGLLVGLTVVAAAVGVLTKQWCRVNGWAAPGVHAHMCYSDFAQ
+LFPTRGLSDGHFPFYTPLPPEQWMEYPALLAVVAGVTMWLVPASGDLHERTVTYFDVNAI
+GVVLCWIVLVVATAYTARGRSRDALLVALAPGIILTSMLNWDLWAVMLAALALWAWTAGR
+PTLAGLLIGLGTATKLYPLFFFGAIFVLALRTGRWAGFVKAALAGAAAWLAVNLPFMLTA
+FDQWSRFYTFSGDRAVSFSSTWLALAWTGWSGETFTTLQNGLFLVCCVGIAYLALAARHR
+PRMAQLCFLIVASFILWGKVYSPQFVMWLIPLVVLATPRWRAFWIWQAVEVYHWGGVWME
+SARITSDGAFAGGAWWITAWYASGIVAHIVALVWLMTTVVKDILDPVRDPVRRTALDQGA
+PEIAPGVAEDPHAGVFTGARDRLLLPPAGLGLQPLGESAGR
+>2_1838
+MSSHPRAADAAPRPAAGLRPAGRPSPRWIGVLIAVTAAAAVVGLLTKQWCRLNGWATPGV
+HVHMCYSDFAQLFPTRGLSDGYFPFYTPLPEEQWMEYPALLAVVAGASSWLVPSTGTLAE
+RTVTYFDVNAAGVVLCWMAVVVATAFTARGRSKDALLVAVAPGIILTSMLNWDLWAVMLA
+ALALWAWSEDRPVLSGLLLGLGAAMKLYPLFFFGALLVLALRTGRWRGFLGALAAGAAAW
+LAVNVPFMLTAFDQWSRFYTFSGDREVSFSSMWLAFTWTGLSGSAFSVISNGLFALCCVG
+VAYLGLSSRHRPRLAQLCLLIVAAFLLLGKVYSPQFVMWLIPLVVLATPRRKQFWIWQAA
+EFFHWAGVWMESARITSGGEFGGTWVTVWYASGIVLHMATLIWICVTVIRDIRDPERDPV
+RRSALEQGVEPLAPGVAEDPNAGVFTGAADRFLLPPAGHGLQPTR
+>3_646
+MTSHPRSPAPSRPSGRWVGLLVGLTVVAAAVGVLTKQWCRVNGWAAPGVHAHMCYSDFAQ
+LFPTRGLSDGHFPFYTPLPPEQWMEYPALLAVVAGVTMWLVPASGDLHERTVTYFDVNAI
+GVVLCWIVLVVATAYTARGRSRDALLVALAPGIILTSMLNWDLWAVMLAALALWAWTAGR
+PTLAGLLIGLGTATKLYPLFFFGAIFVLALRTGRWAGFVKAALAGAAAWLAVNLPFMLTA
+FDQWSRFYTFSGDRAVSFSSTWLALAWTGWSGETFTTLQNGLFLVCCVGIAYLALAARHR
+PRMAQLCFLIVASFILWGKVYSPQFVMWLIPLVVLATPRWRAFWIWQAVEVYHWGGVWME
+SARITSDGAFAGGAWWITAWYASGIVAHIVALVWLMTTVVKDILDPVRDPVRRTALDQGA
+PEIAPGVAEDPHAGVFTGAPDRLLLPPAGRGLQPLGGSADR
+>4_870
+MTSHPRSPAPTRPSARWVGLLVGLTVVAAAVGVLTKQWCRVNGWAAPGVHAHMCYSDFAQ
+LFPTRGLSDGHFPFYTPLPPEQWMEYPALLAVVAGVTMWFVPASGDLHERTVTYFDVNAI
+GVVLCWIVLVVATAYTARGRSRDALLVALAPGIILTSMLNWDLWAVMLAALALWAWTAGR
+PTLAGMLIGLGTATKLYPLFFFGAIFVLALRTGRWAGFVKAAVAGAAAWLAVNLPFMLTA
+FDQWSRFYTFSGDRAVSFSSTWLALAWTGWSGETFTTLQNGLFLVCCVGIAYLALAARHR
+PRMAQLCFLIVASFILWGKVYSPQFVMWLIPLVVLATPRWRAFWIWQAVEVYHWGGVWME
+SARITSDGAFAGGAWWITAWYASGIVAHVVALVWLMTTVVKDVLDPVRDPVRRTALDQGA
+PEIAPGVAEDPHAGVFTGARDRLLLPPAGRGLQPLGESAGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001343.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001343.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2387cda35d485b24d0ea7792a6f26710acb5cc68
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001343.fa
@@ -0,0 +1,55 @@
+>0_1889
+MSVTTPRPSGSTAGRPAHIGVGGLRADPKVAGGNTWPILVGTLGSLLLVAGSFSVGWLAS
+ASPINRWQWLIPWRTQETGVIVGTILLTLGCWVMFWAWLRLGQTVRPFGRGSLRTVNLAT
+ALWCLPQVFALPIFSRDIFAYVGQGRLMVAGQDPYEDTISSLSNWFQLGADATWADSETP
+YGPIFLWIEQAVVAVSGDMNPDLAIFLFRLVAVAGVVLIMVFVPLLARRLRVNGAWAQWV
+SAANPLFTISFVASGHNDALMVGLALAGTWCALRAGHPLRPQSAARSAAWGVAGVVLVTL
+SLGIKPITLVLLPFIGLLWAGPTAGWIRRFVLWFLTAGISFGIMAVVGALNGFGFGWVAV
+MVGTGTGTVPWGPIGILSLLTVGISELVGQGADQQAVEGVYKTAGRVLSVLIVLALMFLG
+RQDRVLTRMTWAFTALVILSPIIQPWYLLWLLPFFAVIGIRDDWQIKWVVFTVGYFLAFG
+ASDQLFTWQFLAIADQVKAISLIVSAVCLAWILVVDRRTSRFVKDHWHVRPAVRAGLARL
+RRAPRTPEPGE
+>1_922
+MSVSTPRPSGSTAHRPEYVGVGGLRADPQVAGADWWPILVGTLGSLLLVVGSYSVGWLAS
+ASPINRWQWLIPWRTQETGVLAGAALLTLGCWVMFWAWLRLGQTIRPFGRGALRTVNLAT
+VLWCLPQVVALPIFSRDIFAYVGQGRLMEAGQDPYVDTISSLSNWFQLGADATWADSETP
+YGPIFLWIEQAVVAISGDMNPDLAIFLFRLVAVAGVALIMVFVPLLARRMGVNDAWAQWI
+SVANPLFTISFVASGHNDALMVGLALAGTWCALRAGHPLRPQRPGQSVAWGVAGVVLVTL
+SLGIKPITLVLLPFIGLLWAGPTARWPRRFAFWALTAGISFGLMALVGVLNGFGFGWVAV
+MVGTGTGTVPWGPIGMLSLITVGASELLGQGADVQAVEGVYKTAGRVLSVLIVLALMFLG
+RQDRVMTRMTWAFTALVILSPIIQPWYLLWLLPFFAVIGIRDNWQIKWVVFTVGYFLAFG
+ASDQLFTWQFLDIADQVKAVSLIVSAVCLLWILVVDRRTSRFVKDHWHVRPAVRAGLARL
+RGAPRPVEPGE
+>2_1840
+MGVPAAGPSGSTAFRPEYIGVGGLRADPQVAGRPLWPILVGLLGSLMLVAGSFSVGWLAS
+ASPINRWQWLIPWRTQESGVMTGTVLLTLGCWVMFWAWLRLGQTVRPFGPGALRTVNVAT
+ALWCLPMVFALPIFSRDIFAYVGQGRLMVNGQDPYTDAISSLNNWFQLGADATWAGSETP
+YGPVFLWIEEVVVRISGDMNPDLAIFLFRLVAVVGVVLTMVFVPLLARRLSVNGAWAQWV
+SAANPLFTVSFVASGHNDALMVGLALAGTWCALRAGHPRGGQSTASHVGWGVAAVVLVTA
+SLGVKPITLVLLPFIGLLWAGPRAGWSRKFVYWAVTGGLSLALMVLVGRLNGFGFGWLEV
+MAGTGSGTSPWAPVGMMSIATRVLMEVLQLGPDLQAIEGFYKSVCRLLSVLIVLALMFLG
+RQDRVFTRMTWAFTTLVVLSPIVQPWYLLWLLPFFAVIGLRDNWQIKWVVFTVGYFLAFG
+AMDQLFTWQFLDIAEEVRAASLLVSGVSLVWILAVDRKTSRFIKDHWHVRPALREGVRRL
+RRRPTGGAAAPHTRPHPVERLGESGSEDAAARGAR
+>3_644
+MSVSTPRPSGSTAHRPEYVGVGGLRADPQVAGADWWPILVGTLGSLLLVVGSYSVGWLAS
+ASPINRWQWLIPWRTQETGVLAGTVLLTLGCWVMFWAWLRLGQTIRPFGRGALRTVNLAT
+VLWCLPQVVALPIFSRDIFAYVGQGRLMVAGQDPYVDTISSLSNWFQLGADATWADSETP
+YGPIFLWIEQAVVAISGDMNPDLAIFLFRLVAVAGVALIMVFVPLLARRLGVNDAWAQWI
+SAANPLFTISFVASGHNDALMVGLALAGTWCALRAGHPLRPQRPGQSVAWGVAGVVLVTL
+SLGIKPITLVLLPFIGLLWAGPTARWPRRFAFWALTAGISFGLMALVGVLNGFGFGWVAV
+MVGTGTGTVPWGPIGMLSLITVGASELLGQGADVQAVEGVYKTAGRVLSVLIVLALMFLG
+RQDRVMTRMTWAFTALVILSPIIQPWYLLWLLPFFAVIGIRDNWQIKWVVFTVGYFLAFG
+ASDQLFTWQFLDIADQVKAVSLIVSAVCLLWILVVDRRTSRFVKDHWHVRPAVRAGLARL
+RGAPRPVEPGE
+>4_868
+MSVSTPRPSGSTAHRPEYVGVGGLRADPQVAGADWWPILVGTLGSLLLVVGSYSVGWLAS
+ASPINRWQWLIPWRTQETGVLAGTALLTLGCWVMFWAWLRLGQTIRPFGRGALRTVNLAT
+VLWCLPQVVALPIFSRDIFAYVGQGRLMEAGQDPYVDTISSLSNWFQLGADATWADSETP
+YGPIFLWIEQAVVAISGDMNPDLAIFLFRLVAVAGVALIMVFVPLLARRLGVNGARAQWI
+SAANPLFTISFVASGHNDALMVGLALAGTWCALRAGHPLRPQRPGQSVAWGVAGVVLVTL
+SLGIKPITLVLLPFIGLLWAGPTARWPRRFAFWALTAGISFGLMALVGVLNGFGFGWVAV
+MVGTGTGTVPWGPIGMLSLITVGASELLGQGADVQAVEGVYKTAGRALSVLIVLALMFLG
+RQDRVMTRMTWAFTALVILSPIIQPWYLLWLLPFFAVIGIRDNWQIKWVVFTVGYFLAFG
+ASDQLFTWQFLNIADQVKAVSLIVSAVCLLWILVVDRRTSRFVKDHWHVRPAVRAGLARL
+RGAPRPVEPGE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001345.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001345.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c4f123f07a37c1fc2ed080493d9d3dcebf7a9930
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001345.fa
@@ -0,0 +1,15 @@
+>0_1948
+MSVVKINAITVPEGAGPELEKRFAVRKHAVDAEPGFEGFQLLRPTAGEDRYFVVTTWATE
+EDFQNWKGGRMPAAHAAESEGRPAPVATGAELLEFEVVDLD
+>1_913
+MSVVKINAISVPEGAGPELEKRFAARKHAVDQEPGFEGFQLLRPTAGEDRYFVVTTWASE
+EDFRRWRDGRMPAAHAAEQGGRPAPVATGADLLEFEVVDLG
+>2_1848
+MSVVKINAISVPEGAGPELEKRFAVRKHAVDQEPGFEGFQLLRPTAGEDRYFVVTTWASE
+EDFQRWRDGRMPAAHADEQGGRPTPVATGADLLELEVVDLG
+>3_641
+MSVVKINAISVPEGAGPELEKRFAARKHAVDQEPGFEGFQLLRPTAGEDRYFVVTTWASE
+EDFQRWRDGRMPAAHAAEQGGRPAPVATGADLLEFEVVDLG
+>4_861
+MSVVKINAISVPEGAGPELEKRFAARKHAVDQEPGFKGFQLLRPTAGEDRYFVVTTWASE
+EDFQRWRDGRMPAAHAAEQGGRPAPVATGADLLEFEVVDLG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001349.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001349.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8400c0c2b5b619819f35890afd83f9e9de49b894
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001349.fa
@@ -0,0 +1,14 @@
+>0_1955
+MTLEWPRDRRRPTPAKVVAIAESYGYRLLEKRERDHVIELDFERIRDDEGF
+>1_907
+MTAMNVFGVVYPFVLLVIAAAVWLGIRSSGRERTHASAVEQRLRERTFTGQDRVTLEWPR
+DRRRPSLAKVVSIGESYGYRLLDKREREHVVELEFERILDDEGF
+>2_1852
+MQTIPVMGWVFPVVLLVIAAAFWLGVRSSGGARGDSDLERRLRERTFTGAPRARLEWPRD
+RRRPTLAQLVRIGASHGYRLVSRTEAEHVYILDFQRVEDDDL
+>3_635
+MTAMNVFGVVYPFVLLVIAAAVWLGVRSSGRERTHASALEHRLRERTFTGQDRVTLEWPR
+DRRHPSLAKVVSIGESYGYRLLDKREREHVVELEFERILDDEGF
+>4_856
+MTAMNVFGVVYPFVLLVIAAAVWLGIRSSGRERTHASAVEQRLRERTFTGQDRVTLEWPR
+DRRRPSLAKVVSIGESYGYRLLDKREREHVVELEFERILDDEGF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001353.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001353.fa
new file mode 100644
index 0000000000000000000000000000000000000000..02177991c8462830b9838302b50ddf577f9605d2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001353.fa
@@ -0,0 +1,35 @@
+>0_1960
+MDRMTVSRPAVPASPEHALAPPTLGHVLEVVQGLWPRDLAEPWDAVGPVAGRPEAPVRTV
+LWALDPVQAVADEAVARGADLVVTHHPLLLRGTSSVAAVGHAAAAKGRLLHTLIEHRIAL
+FAAHTNADAVVGGVSDVLARAVGVTGALSPLTTSAAGTGAEGIGRVGDLPEETDLAAFAR
+VVHAALPATAGGVRVAGDPAQRIRRVAVCGGAGDSLFDAVRASGADVYVTADLRHHPASE
+ARETAVSGDGRPALVDVSHWASESLWLEHGARALEAALAERGLGVTTLFSDHRSDPWDFL
+VGGERADEGSHA
+>1_903
+MAGMTVSRPAVPASPEHALAPPTLGQVLEVVEGLWPRELAEPWDAVGPVAGRPEAPVRTV
+LWALDPVQAVADEAVARGADLVVTHHPLLLRGTSSVAAVGHAAAKGRLLHTLIEHRIALL
+AAHTNADAVVGGVSDVLARAVGVTGALSPLTASAAGTGAEGIGRVGDLPEETDLAAFARA
+VHAALPATAGGVRVAGGPAQRIRRVAVCGGAGDSLFDAVRASGADVYVTADLRHHPASEA
+RETAASGDGRPALVDVSHWASESLWLEHGARALEAALVERGLGVTTLFSDHRSDPWDFLV
+GGERADEGSRA
+>2_1856
+MTVPDHPLQGAGEGACGRAVATDAVASDVPRLSDVLAAVERLWPARLAESWDAVGPVVGR
+AGRPVRHVLWAVDPVQDVVDEAVRIGADLVVTHHPLMLRGTTSVAAVGHGGAFKGEVVHT
+LIEHGIALVAAHTNADSAVGGVSDAIAWRLGLTDVSPLQPSAGGSGAEGIGRVGELPAPV
+PLVEFARTVAALLPATAGGVRVAGDADLPVRRVAVCGGAGDSLFDAVRAADADVYVTSDL
+RHHPASEAREAARHAGGRPALVDTAHFAGEWLWLADGAAALAEELARGGHRARMTVSELV
+TDPWDLHLPSGLAERTTS
+>3_631
+MAGMTVSRPTVPASPEHALAPPTLGQVLEVVQGLWPRELAEPWDAVGPVAGRPEAPVRTV
+LWALDPVQAVADEAVARGADLVVTHHPLLLRGTSSVAAVGHAAAAKGRLLHTLIEHRVAL
+LAAHTNADAVVGGVSDVLARAVGVIGALSPLTTSAAGTGAEGIGRVGDLPEETDLAAFAR
+AVHAALPATAGGVRVAGDPAQRIRRVAVCGGAGDSLFDAVRASGADVYVTADLRHHPASE
+ARETAAPGEGRPALVDVSHWASESLWLEHGARALEAALAERGLGVTTLFSDHRSDPWDFL
+VGGERADEGSHA
+>4_852
+MAGMTVSRPAVPASPEHALAPPTLGHVLEVVQGLWPRELAEPWDAVGPVAGRPEAPVRTV
+LWALDPVQAVADEAVARGADLVVTHHPLLLRGTSSVAAVGHAAAAKGRLLHTLIEHRIAL
+LAAHTNADAVVGGVSDVLARAVGVTGALSPLTTSAAGTGVEGIGRVGDLPEETDLAAFAR
+AVHAALPATAGGVRVAGDPAQRIRRVAVCGGAGDSLFDAVRASGADVYVTADLRHHPASE
+AQETAVSGGGRPALVDVSHWASESLWLEHGARALEAALAERGLGVTTLFSDHRSDPWDFL
+VGGERADEGSHA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001355.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001355.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ee49bc3530bbe4e458a91e220b96f3bcea5252d6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001355.fa
@@ -0,0 +1,35 @@
+>0_1962
+MAHILDDITQAVGGTPLVRLNRLAKDLPGDVAVKVEFYNPANSVKDRIGTAIVDAAEASG
+ELTPGGTIVEGTSGNTGIALAMVGAARGYRVILTMPETMSTERRVMLKAFGAEIVLTPGA
+DGMRGALERAQQIVASTPNSIWAQQFANQANVQAHYTGTGPEIWDATEGAVDVFIAGVGT
+GGTITGAGRYLREQKPDVKLIAVEPADSPILSGGQAGPHKIQGIGANFVPEILDTELYDD
+VYAASLEESIETSRTLATQEGILGGISTGAIISAALKEAAKPESEGKLIVAIVCDFGERY
+ISTALFEDIRG
+>1_901
+MARILDDITQAVGGTPLVRLNRLAKDLPGDVAVKVEFYNPANSVKDRIGTAIVDAAEAAG
+ELSPGGTIVEGTSGNTGIALAMVGAARGYRVILTMPETMSTERRVMLKAFGAEIVLTPGA
+DGMRGALERAQEIVRSTPNSIWAQQFANQANVQAHYTGTGPEIWDASEGAVDVFIAGVGT
+GGTITGAGRYLREQKPDVKLIAVEPADSPILSGGQAGPHKIQGIGANFVPEILDTDLYDE
+VYPATFEESIETARRLGTEEGILGGISTGAIISAALKEAAKPESEGKLIVAIVCDFGERY
+ISTALFEDIRG
+>2_1858
+MAKILDNITQAVGGTPLVRLNSLTEGLPGDVAVKVEFYNPANSVKDRIGVAIVDAAEKSG
+QLTPGGTIVEGTSGNTGIALAMVGAARGYKVILTMPETMSAERRVMLRAFGAEIVLTPGA
+DGMRGAVERAQQIVRDTPNSIWAQQFANEANVRAHYTTTGPEIWDATGGAVDTFIAGVGT
+GGTITGAGRYLREQKPDVKLIAVEPSDSPILSGGQAGPHKIQGIGANFVPEILDTELYDE
+VYAATFEESIATSRALGAREGILGGISTGAIVSAALKEAAKPESEGKLIVAVVCDFGERY
+ISTALFEDVRG
+>3_629
+MARILDDITQAVGNTPLVRLNRLAKDLPGDVAVKVEFYNPANSVKDRIGTAIVDAAEAAG
+ELTPGGTIVEGTSGNTGIALAMVGAARGYRVILTMPETMSTERRVMLKAFGAEIVLTPGA
+DGMRGALERAQEIVRSTPNSIWAQQFANQANIQAHYTGTGPEIWDASEGAVDVFIAGVGT
+GGTITGAGRYLREQKPDVKLIAVEPADSPILSGGQAGPHKIQGIGANFVPEILDTDLYDE
+VYPATFEESIETARRLGTEEGILGGISTGAIISAALKEAAKPESEGKLIVAIVCDFGERY
+ISTALFEDIRG
+>4_850
+MARILDDITQAVGNTPLVRLNRLAKDLPGDVAVKVEFYNPANSVKDRIGTAIVDAAEAAG
+ELTPGGTIVEGTSGNTGIALAMVGAARGYRVILTMPETMSTERRVMLKAFGAEIVLTPGA
+DGMRGALERAQEIVRSTPNSIWAQQFANQANIQAHYTGTGPEIWDASEGAVDVFIAGVGT
+GGTITGAGRYLREQKPDVKLIAVEPADSPILSGGQAGPHKIQGIGANFVPEILDTDLYDE
+VYPATFEESIETARRLGTEEGILGGISTGAIISAALKEAAKPESEGKLIVAIVCDFGERY
+ISTALFEDIRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001359.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001359.fa
new file mode 100644
index 0000000000000000000000000000000000000000..810af98ef3253a9f7ce80209670aae4c9f539333
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001359.fa
@@ -0,0 +1,20 @@
+>0_1967
+MLFLQDGQWSILGLFQDELAGKATARTLDALLQSVTCLRMGGRDVLDGADTPRPGVEWAG
+YDREFEEADVAESRDVEPHGRIWILPATDGATVGLKLPGHRRYHDAVAQFADVDAARAAV
+AAIDELLGVGPRG
+>1_897
+MSATPLGFWKLPARPDGAARHLAVITGGEAQQTMLFLQDGQWSILALFQDELAGKAAART
+LDALLQSVTCLRMGGRDVLDGADTPRPGIEWAGYDREFEEADVAEQRDVEPRGRIWILPA
+TDGASVGLKLPGHRRYDDAVAQFADVDAARAAVAAIDELLGVGPRG
+>2_1864
+MPATPHGFWKLPAPSDAGPRHLAVITGGEAEQTMLFLQDAAGWHVLALFQDELAGRTTAR
+TLDRLLQSVTYLRMGGADLMDGADTERPGVEWAGYDREFEEQDAADETAADPAARLWILP
+ATDGASVGLKLPGHPRYADAVAQFVDAGTARAAVDAVDALIGARRPGAARPAAD
+>3_625
+MSATPLGFWKLPARPDGAARHLAVITGGEAQQTMLFLQDGQWSILALFQDELAGKAAART
+LDALLQSVTCLRMGGRDVLDGADTPRPGIEWAGYDREFEEADVAEQRDVEPRGRIWILPA
+TDGASVGLKLPGHRRYDDAVAQFADVDAARAAVAAIDELLGVGPRG
+>4_846
+MSATPLGFWKLPARPDGAARHLAVITGGEAQQTMLFLQDGQWSILALFQDELAGKAAART
+LDALLQSVTCLRMGGRDVLDGADTPRPGIEWAGYDREFEEADVAEQRDVEPRGRIWILPA
+TDGASVGLKLPGHRRYDDAVAQFADVDAARAAVAAIDELLGVGPRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001360.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001360.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d2604e7da306fdaa0293bc0e3fc72a0c0f77c85c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001360.fa
@@ -0,0 +1,25 @@
+>0_1968
+MATTPSVGRMSWFPRRRAASAPRALAARLENADAIAAAARRADVPLPVAAALAQLESGGR
+NVFGHDAGGVHAAPRGTDVPVTRELFEELEARVAAGETSNGVGPAQITWPPYFAQARRRG
+LRLWEPEDNMAFGLEILRGHLGGDLTEEGIARAGTLYNAGTLQGGVTDYGRRLARASRDW
+ARRLGEPAPPSSSPGRGAGRDGDRGRARSGAPGRTHVIEPGDTLWAIARANGTDVATLRR
+LNPDLVPEALAVGAPVRLP
+>1_896
+MGLLRDLLTRRSARDRSSDPPATLGRHLDNAAAIVAAARRADVPLAVAAALAELESGGRN
+VFGHDAGGVHSAPRGTDVLVTRERYEELVARVAQGETSNGVGPAQITWPPYFAQAAERGL
+HLWEPEDNLAFGLEILRGHLRGDLSAEGIARAGTLYNAGTLSDGVTAYGRRLAAASRAWA
+ERLGEPAPPPVRPG
+>2_1865
+MDPVTVLSASLAHPEAIVAAAGRARVPVSVAAALAELESGGRNVFGNDVGGVFSSPGAPD
+VEVTPERVAELRRRVADGERSNGVGPAQITWPPLFDRADAEGLDLADPEDNMTLGLSLLR
+DSARGDFSVAGLERAGTLYNAGTLAGGVTDYGRRLAAAAAAWERRLTARG
+>3_624
+MGLLRDLLTRRSARDRSSDPTATLGRHLDNAAAIVAAARRADVPLAVAAALAELESGGRN
+VFGHDAGGVHSAPRGTDVLVTRERYEELVARVAQGEKSNGVGPAQITWPPYFAQAAERGL
+HLWEPEDNLAFGLEILRGHLRGDLSAEGIARAGTLYNAGTLSDGVTAYGRRLAAATRAWA
+ERLGESAPPPVRPG
+>4_844
+MGLLRDLLTRRSARDRPSDPTATLGRHLDNAATIVAAARRADVPLPVAAALAELESGGRN
+VFGHDAGGVHSAPRGTDVPVTRERYEELVARVAQGETSNGVGPAQITWPPYFAQAAERGF
+RLWEPEDNLAFGLEILRGHLRGDLSAEGIARAGTLYNAGTLTHGVTAYGRRLAAATRVWA
+ERLGELAPPPVRPG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001365.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001365.fa
new file mode 100644
index 0000000000000000000000000000000000000000..38ad6ffde3b88462a793cfc700ba304fdf2e3ee2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001365.fa
@@ -0,0 +1,85 @@
+>0_1974
+MSAAEESSQILSGLTQQFPDKDPQETAEWIESLDGLIEERGTERAQFIMRSLLQRAGAKS
+VGVPMVTTTDYVNTIPADQEPEYPGDEELERRYRNYLRWNAAAIVQRAQKEGIGVGGHIS
+SYAGQATLYEVGLNHFFRGQDHPGGGDHIFFQGHSSPGNYARAFLEGRLTEEDLDGFRQE
+KSRQGHALSSYPHPRMMPDFWQFPTVSMGLGPMNAIFQAQTNRYLHNHGIKDTSDQHVWA
+FLGDGEMDEPESRGQLHVAANDKLDNLTFVINCNLQRLDGPVRGNGKIVQELESYFRGAG
+WNVIKVLWGREWDPLLEADDEGELVRIMNETLDGDYQTYKAESGGFVRDHFFGRSSATKE
+MVADMSDEEIWGLKRGGHDYRKVYAAYKSAMEHKGQPTVILAHTIKGYGLGKSFEGRNAT
+HQMKKMTVEDIKVFRDRHRIPVTDEQIERDPYDIPYYHPGKDAPEIKYLMERRKELGGFV
+PERRAKHHSIPVPPEAAYKQARKGSGKQQAATTMAFVRLLKDLMRDKNMGSRIVPIIPDE
+ARTFGMDSFFPTAKIYNPKGQNYLSVDRDLFLSYKESPQGKIYHVGINEDGATAAFNAVG
+TAYSTHGEPMIPVYIFYSMFGFQRTADNIWAAGDQLARGFMIGATAGRTTLAGEGTQHMD
+GHSPVIAGTNPAVKHYDPAYSYEIAHIVRQGFEDMYGEHDRGEDVRNVIYYLTVYNEPIH
+HIDEPEDLDVEGLLKGIYRLSEGQGDGPKVQLMGSGVSLPWAVEAQGILAEEWGVNASVW
+SVTSYNELYRDAVAAEKDALKDPSAAPRVPYVTQKLEGAEGPVVATSDFATSWTNQIRPF
+IPNRFAALGADEFGFADTRSAARRYFLIDSHSMVVRALQLLEEEGSVEKGTAAKAHEKYR
+LDDVNAGTTGNAGGDA
+>1_891
+MSAAEESSQIRSGLTDQLPDKDPQETSEWIESLDGLIEERGTERAQYIMRSLMQRASAQS
+VALPYVTTTDYVNTIPADQEPEYPGDEELERRYRNYLRWNAMALVQRAQRDGVGVGGHIS
+SYAGQATLYEVGLNHFFRGQDHPGGGDHIFFQGHSSPGNYARAFLEGRLTEEDLDGFRQE
+KSRQGHGLPSYPHPRMMPHFWQYPTVSMGLGPMNAIFQAQTNRYLHNNGIKDTSDQHVWA
+FLGDGEMDEPESRGQLHIAANDKLDNLTFVINCNLQRLDGPVRGNGKIVQELESYFRGAG
+WNVIKVLWGREWDPLLEADDEGELVRIMNETLDGDYQTYKAESGGFVRDHFFGRSSVTKE
+MVADMTDDEIWGLKRGGHDYKKVYAAYKAAMEHKGQPTVILAHTIKGYGLGKSFEGRNAT
+HQMKKLTVDDLKVFRDRHRIPISDEQIEKDPYNIPYYHPGADAPEITYMMERRKELGGFV
+PERRSDYHAIPLPPESAYKQARKGSGKQQAATTMAFVRLLKDLMRDKNMGPRFVPIIPDE
+ARTFGMDSFFPTAKIYNPKGQNYLSVDRDLFLSYKESPQGKIYHVGINEDGATAAFNAIG
+TAYSTHGEPMIPVYIFYSMFGFQRTADNIWAAGDQLARGFMIGATAGRTTLAGEGTQHMD
+GHSPVLASTNPAVKHYDPAYSYEIAHIVRQGLEDMYGDHDRGDDVRNVIYYLTVYNEPIT
+HIEEPEGLDVEGLLKGIYRLSEGQGDGPKVQLLGSGVSVPWALDAQRILSEEWGVNASVW
+SVTSYNELYRDAVAAEKDALKDPSATPRVPYVTQALQGAEGPIVATSDYSTSWTNQIRPF
+VPNRFSALGADEFGFADTRAAARRYFLIDTHSMVVRALQLLEEEGEVERGTAAKAHEKYR
+LDDVNAGTTGIAGGDA
+>2_1872
+MSAAEESSQIVSGLTSQRPDKDPQETAEWIESFDGLVDERGTERAEYIMRSLMQRAGAKS
+VALPHVTTTDYVNTIPADQEPEYPGDEELERRYRNYLRWNAMALVQRAQRDAVGVGGHIS
+SYAGQATLYEVGLNHFFRGQDHPGGGDHIFFQGHSSPGNYARAFLEGRLTEEDLDGFRQE
+KSRQGHALPSYPHPRMMPHFWQYPTVSMGLGPMNAIFQAQTNRYLHNNGIKDTSDQHVWA
+FLGDGEMDEPESRGQLHVAANDKLDNLTFVVNCNLQRLDGPVRGNGKIVQELESYFRGAG
+WNVIKVLWGREWDPLLEADDEGELVRIMNETLDGDYQTYKAESGGFVREHFFGRSSVTKE
+MVADMTDDEIWGLKRGGHDYKKVYAAYKAAMEHKGQPTVILAHTIKGYGLGKSFEGRNAT
+HQMKKLTVDDLKVFRDRHRIPISDEQIEKDPYNIPYYHPGADAPEITYMMERRKELGGFV
+PERRSTYHQIPLPPESVYKQARKGSGKQQAATTMAFVRLLKDLMRDKNMGPRFVPIIPDE
+ARTFGMDSFFPTAKIYNPKGQNYLSVDRDLFLSYKESPQGKIYHVGINEDGATAAFNAIG
+TAYSTHGEPMIPVYIFYSMFGFQRTADNIWAAGDQLARGFMIGATAGRTTLAGEGTQHMD
+GHSPVLASTNPAVKHYDPAYSYEIAHIVRQGLEDMYGDHEDGDARRNVIYYLTVYNEPIT
+HIEEPEGLDVEGLLKGIYRLSEGQGDGPKVQLLGSGVSVPWALDAQRILSEEWGVNASVW
+SVTSYNELYRDAVAAEKDALKDPSATPRVPYVTQALQGAEGPIVATSDYSTSWTNQIRPF
+VPNRFSALGADEFGFADTRAAARRYFLIDTHSMVVRALQLLEEEGGVERGTAAKAHEKYR
+LDDVTAGTTGIAGGDA
+>3_619
+MSAAEESSQIRSGLTDQLPDKDPQETSEWIESLDGLIEERGTERAQYIMRSLMQRASAQS
+VALPYVTTTDYVNTIPADQEPEYPGDEELERRYRNYLRWNAMALVQRAQRDAVGVGGHIS
+SYAGQATLYEVGLNHFFRGQDHPGGGDHIFFQGHSSPGNYARAFLEGRLTEQDLDGFRQE
+KSRQGHALPSYPHPRMMPHFWQYPTVSMGLGPMNAIFQAQTNRYLHNNGIKDTSDQHVWA
+FLGDGEMDEPESRGQLHVAANDKLDNLTFVINCNLQRLDGPVRGNGKIVQELESYFRGAG
+WNVIKVLWGREWDPLLEADDEGELVRIMNETLDGDYQTYKAESGGFVRDHFFGRSSVTKE
+MVADMTDDEIWGLKRGGHDYKKVYAAYKAAMEHKGQPTVILAHTIKGYGLGKSFEGRNAT
+HQMKKLTVDDLKVFRDRHRIPISDEQIEKDPYNIPYYHPGADAPEITYMMERRKELGGFV
+PERRSDYHAIPLPPESAYKQARKGSGKQQAATTMAFVRLLKDLMRDKNMGPRFVPIIPDE
+ARTFGMDSFFPTAKIYNPKGQNYLSVDRDLFLSYKESPQGKIYHVGINEDGATAAFNAIG
+TAYSTHGEPMIPVYIFYSMFGFQRTADNIWAAGDQLARGFMIGATAGRTTLAGEGTQHMD
+GHSPVLASTNPAVKHYDPAYSYEIAHIVRQGLEDMYGDHDRGDDVRNVIYYLTVYNEPIT
+HIEEPEGLDVEGLLKGIYRLSEGQGDGPKVQLLGSGVSVPWALDAQRILSEEWGVNASVW
+SVTSYNELYRDAVAAEKDALKDPSASPRVPYVTQALQGAEGPIVATSDYSTSWTNQIRPF
+VPNRFSALGADEFGFADTRAAARRYFLIDTHSMVVRALQLLEEEGEVERGTAAKAHEKYR
+LDDVNAGTTGIAGGDA
+>4_839
+MSAAEESSQIRSGLTDQLPDKDPQETSEWIESLDGLIEERGTERAQYIMRSLMQRASAQS
+VALPYVTTTDYVNTIPADQEPEYPGDEELERRYRNYLRWNAMALVQRAQRDAVGVGGHIS
+SYAGQATLYEVGLNHFFRGQDHPGGGDHIFFQGHSSPGNYARAFLEGRLTEQDLDGFRQE
+KSRQGHALPSYPHPRMMPHFWQYPTVSMGLGPMNAIFQAQTNRYLHNNGIKDTSDQHVWA
+FLGDGEMDEPESRGQLHVAANDKLDNLTFVINCNLQRLDGPVRGNGKIVQELESYFRGAG
+WNVIKVLWGREWDPLLEADDEGELVRIMNETLDGDYQTYKAESGGFVRDHFFGRSSVTKE
+MVADMTDDEIWGLKRGGHDYKKVYAAYKAAMEHKGQPTVILAHTIKGYGLGKSFEGRNAT
+HQMKKLTVDDLKVFRDRHRIPISDEQIEKDPYNIPYYHPGADAPEITYMMERRKELGGFV
+PERRSDYHAIPLPPESAYKQARKGSGKQQAATTMAFVRLLKDLMRDKNMGPRFVPIIPDE
+ARTFGMDSFFPTAKIYNPKGQNYLSVDRDLFLSYKESPQGKIYHVGINEDGATAAFNAIG
+TAYSTHGEPMIPVYIFYSMFGFQRTADNIWAAGDQLARGFMIGATAGRTTLAGEGTQHMD
+GHSPVLASTNPAVKHYDPAYSYEIAHIVRQGLEDMYGDHDRGDDVRNVIYYLTVYNEPIT
+HIEEPEGLDVEGLLKGIYRLSEGQGDGPKVQLLGSGVSVPWALDAQRILSEEWGVNASVW
+SVTSYNELYRDAVAAEKDALKDPSATPRVPYVTQALQGAEGPIVATSDYSTSWTNQIRPF
+VPNRFSALGADEFGFADTRAAARRYFLIDTHSMVVRALQLLEEEGEVERGTAAKAHEKYR
+LDDVNAGTTGIAGGDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001367.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001367.fa
new file mode 100644
index 0000000000000000000000000000000000000000..835ad81b7cb17fde8437b7f60a2f2b779953cc56
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001367.fa
@@ -0,0 +1,35 @@
+>0_1976
+MLAIVCPGQGSQTPGFLSPWLELDGTRALLESLSDAAGVDLVRHGTESDEETIKDTAVAQ
+PLIVAAGLVAAAALEADAAAPASTLVAGHSVGEITAAAVTGVLSPADALALVRVRATGMA
+RAAAATPTGMAAVVGGDQDEVLAAIEAADLAPANVNGAGQIVAAGTAEALAALGESAPAR
+ARVIPLKVAGAFHTEHMRPAVEELAAHVAGLSPADPRLTLLSNRDGQAVDAGAEVLSRIV
+DQVTRPVRWDLCMEAMAEREVTGVLELLPGGTLTGLAKRGLKGTAQLAVKTPEDLDAARA
+FLAEHTA
+>1_889
+MLAIVCPGQGSQTPGFLAPWLELDGTRDLLASLSDAAGVDLIRHGTESDEETIKDTAVAQ
+PLIVAAGLVAAAALEADAAAPKSTVVAGHSVGEVTAAAVTGVLSPAEALSLVRVRATGMA
+RAAAATPTGMAAVVGGDQDEVLAAIDAAGLAPANVNGAGQIVAAGTAEALGALAESAPAR
+ARVIPLKVAGAFHTEHMRPAVDDLATHVAGLSPSDPRLPLLSNRDGETVESGTDVLARIV
+DQVTRPVRWDLCMATMAARQVTGVLELLPGGTLTGLAKRGLKGTAQLAVKTPEDLDAARA
+FLAEHSA
+>2_1874
+MLAIVCPGQGSQTPGFLAPWRELEGVPSLLDRLSAAAGVDLTAHGTVSDEETIKDTAVAQ
+PLIVAAGLVAADVLGLDALAPDRVLAAGHSVGEITAAAVAGVLSPEDALALVRVRATGMA
+EAAAATPTGMAAVVGGDQDEVLAAVEAAGLTPANVNGGGQIVAAGTQDALDALAAQPPAR
+ARVIPLKVAGAFHTEHMRPAVDALAAHVTGLSPADPRLTLLSNREGAAVASGTEVLERIV
+NQVTRPVRWDLCMEAMAERGVTGIMEVLPGGTLAGLAKRGLKGVPSLAVKAPDDLDAARA
+FIAEHTA
+>3_617
+MLAIVCPGQGSQTPGFLAPWLELDGTRDLLASLSDAAGVDLIRHGTESDEETIKDTAVAQ
+PLIVAAGLVAAAALEADAAAPKSTVVAGHSVGEVTAAAVTGVLSPAEALSLVRVRATGMA
+RAAAATPTGMAAVVGGDQDEVLAAIDAAGLTPANVNGAGQIVAAGTAEALGALAESAPAR
+ARVIPLKVAGAFHTEHMRPAVDDLAAHVAGLSPSDPRLPLLSNRDGEAVESGTDVLARIV
+DQVTRPVRWDLCMATMATRQVTGVLELLPGGTLTGLAKRGLKGTAQLAVKTPEDLDAARA
+FLAEHSA
+>4_837
+MLAIVCPGQGSQTPGFLAPWLELDGTRDLLASLSDAAGVDLIRHGTESDEETIKDTAVAQ
+PLIVAAGLVAAAALEADAAAPKSTVVAGHSVGEVTAAAVTGVLSPAEALSLVRVRATGMA
+RAAAATPTGMAAVVGGDQDEVLAAIDAAGLAPANVNGAGQIVAAGTAEALGALAESAPAR
+ARVIPLKVAGAFHTEHMRPAVDDLAAHVAGLSPSDPRLPLLSNRDGEAVESGTDVLARIV
+DQVTRPVRWDLCMATMATRQVTGVLELLPGGTLTGLAKRGLKGTAQLAVKTPEDLDAARA
+FLAEHSA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001370.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001370.fa
new file mode 100644
index 0000000000000000000000000000000000000000..000d79128f1efa29f87852809d4f3d3536dc2474
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001370.fa
@@ -0,0 +1,40 @@
+>0_1979
+MTRTAVITGLGATTPIGGDVPTFWSNALKGVSGARTMEHEWVEELGLPVTFAAELAVPTA
+DVLSKVEQKRQDPGTQMATVAAREAWRDAGLEGVELDGDRLAVAFGTGIGGVWTLLDGWD
+ILRERGPRRVLPMTVPMLMPNGAAGALSLEFGARAGARTVVSACAAGTEALETALLLIRS
+GQADVVICGASEAAVHPLPMAAFAAMQALSKRNDDPQAASRPYDVDRDGFVLGEGAGVMV
+VESEEHARARGARVYAELAGTGVTSDSHHITAPEPEGLGATRAMRAALKAADLTPEDVCH
+VNAHATSTPKGDAPEYLAMKAVFGDHLDQVQVSATKSQTGHLLGASGAIESILSVLAVHH
+GQAPVTINLENQDPEIPLNVVTGSPAQLPEGPRVAVKNSFGFGGHNAVAVFRSV
+>1_886
+MTRTAVITGLGATTPIGGDVPTFWSHALQGVSGARTMEHDWVEKYELPVTFAAELAVPTS
+EVLSKVEQKRQDPATQMATVAAREAWKDAGLEGAEVDGDRLAVAFGTGIGGVWTLLDGWD
+TLRERGPRRVLPMTVPMLMPNGAAGALSLEFGARAGARTVVSACAAGTEALETALLLVRS
+GQADVVICGAAEAAVHPLPMAAFAAMQALSKRNDDPQAASRPYDVDRDGFVLGEGAGVMV
+IESEEHAKARGARVYAELAGAGVSSDSHHITAPEPEGLGATRAMRAALRSADITPEDVCH
+VNAHATSTPKGDAPEYLAMRAVFGDHLDQVQVSATKSQTGHLLGASGAIESILSVLAVHH
+GQAPVTINLDHQDPEIPLNVVTGSPARLPEGPRVAVKNSFGFGGHNAVAVFRSV
+>2_1877
+MTRTALITGLGATTPIGGDVPTFWANAQKGVSGAATMQHEWVEQYDLPVTFAAELAVPTS
+EVLSKVELKRQDPSTQMATVAAREAWADAGLADADVDPERLAVAMGTGIGGVWTILDAWD
+ALRERGPRRVMPMTVPMLMPNGAAGALSLEFGARAGARTVVAACAAGTEALDTALTLIRT
+GQADVVLCGATEAAVHPMPMAAFAAMQALSKRNDDPQSASRPYDVDRDGFVLGEGAGVMV
+VESEEHAAARGARVYARLAGTGVTSDSHHITAPEPEGLGATRAMRRALADAGLRPEDVGH
+VNAHATSTPKGDAPEYLAMKAVFGTGLDDVLVSATKSQTGHLLGASGAIESILSVLAVHH
+GVAPVTINLENQDPEIPLNVVTGTPAALPADRRVVVKNSFGFGGHNAVAVFTGV
+>3_614
+MTRTAVITGLGATTPIGGDVPTFWSHALQGVSGARTMEHDWVEKYELPVTFAAELAVPTS
+EVLSKVEQKRQDPATQMATVAAREAWKDAGLEGAEVDGDRLAVAFGTGIGGVWTLLDGWD
+TLRERGPRRVLPMTVPMLMPNGAAGALSLEFGARAGARTVVSACAAGTEALETALLLIRS
+GQADVVICGAAEAAVHPLPMAAFAAMQALSKRNDDPQAASRPYDVDRDGFVLGEGAGVMV
+IESEEHAKARGARVYAELAGAGVSSDSHHITAPEPEGLGATRAMRAALRSADIAPEDVCH
+VNAHATSTPKGDAPEYLAMRAVFGEHLDQVQVSATKSQTGHLLGASGAIESILSVLAVHH
+GQAPVTINLDHQDPEIPLNVVTGSPARLPEGPRVAVKNSFGFGGHNAVAVFRSV
+>4_834
+MTRTAVITGLGATTPIGGDVPTFWSHALQGVSGARTMEHDWVEKYELPVTFAAELAVPTS
+EVLSKVEQKRQDPATQMATVAAREAWKDAGLEGAEVDGDRLAVAFGTGIGGVWTLLDGWD
+TLRERGPRRVLPMTVPMLMPNGAAGALSLEFGARAGARTVVSACAAGTEALETALLLVRS
+GQADVVICGAAEAAVHPLPMAAFAAMQALSKRNDDPQAASRPYDVDRDGFVLGEGAGVMV
+IESEEHAKTRGARVYAELAGAGVSSDSHHITAPEPEGLGATRAMRAALRSADITPEDVCH
+VNAHATSTPKGDAPEYLAMRAVFGDHLDQVQVSATKSQTGHLLGASGAIESILSVLAVHH
+GQAPVTINLDHQDPEIPLNVVTGSPARLPEGPRVAVKNSFGFGGHNAVAVFRSV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001372.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001372.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1882318f4193f9fb6cdbab07345586fb2b05e22c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001372.fa
@@ -0,0 +1,35 @@
+>0_1981
+MASSSSSARPAAARAFAPSPRDAAWLEAFEEHLRHERNRSPQTVRAYATDLRDLVAHVAS
+GTWGGHPGTATSEAAVEADAVAPDVFAEVDVEDLRGWLAAMTDAGLARTTLARRVAAVRT
+FTGWLRREGLREDDPALRLRSPRPAATLPHVLQEQQAERLLAGAQARVAEAAVGDDPAAH
+ALALRDAALLELLYATGARVAELSALDVDDLEPGRAVARLTGKGDRQRTVPYGAPAARAL
+DAWLRLGRPRLARDGSGPAVFLGVRGGRLGVRQVRAVVDRALEGLGDTAARGPHALRHTA
+ATHLLDGGADLRSVQEVLGHSSLRTTQVYTHVSIDRLREGYRQAHPRA
+>1_884
+MAPSSSVRPAPAPRAPSPRDTAWLEAFEEHLRHERNRSPQTVRAYLADLHSLIDYVAGTA
+ATAGTPPVDDDAPARHGPSAPDVLPELDIEDLRGWLAAMSGSGLARATLARRVAAVRTFT
+AWLRREGLRSDDPALRLRSPRPEGTLPHVLQEQQATRLLAAAQERVDAAAAGDDPAAHAL
+ALRDAALLELLYATGARVAELSALDVDDLEAGRGVVRLTGKGDRQRTVPYGAPAGRALQA
+WERLGRPRLARPDSGPALFLGARGGRLGVRQARTVVDRALEGLGDTAARGPHALRHTAAT
+HLLDGGADLRSVQELLGHASLRTTQVYTHVSIDRLREGYRQAHPRA
+>2_1879
+MHPPHAHHAPGAPLPPASARDEAWLEAFAEHLLHERGRRPRTVRAYLADLRHLAAHVTDD
+GADAFAEVDLEDLRRWLARMRDQGLSRATVARRVAAARTFLGWLHRSGLRPDDPTLRLRA
+PAPDSRLPQVLQAEQAQRLLQAAEERVHEARRADDLHGAALAARDVALFELLYATGARVA
+EVAALDVDDLDLDRRTARLTGKGDRQRTVPFGAPAAAAVERWLRVARPVLATEHSGVALL
+LGARGGRADVRVLRGAVDRALERLGDTAARGPHALRHTAATHLLDGGADLRSVQELLGHS
+SLQTTQRYTHVSVDRLRDGYRRAHPRA
+>3_612
+MAPSSSARPAPAPRAPSPRDTAWLEAFEEHLRHERNRSPQTVRAYLADLRALIDHVAGTA
+GTSGSPAADDDAPARHVPSAPDVLAELDIEDLRGWLAAMSGAGLARATLARRVAAVRTFT
+AWLRREGLRSDDPALRLRSPRPEGTLPHVLQEQQATRLLAAAQDRVDAAAAGDDPAAHAL
+ALRDAALLELLYATGARVAELSALDVDDLEAGRGVVRLTGKGDRQRTVPYGAPAGRALQA
+WQRLGRPRLARPDSGPALFLGARGGRLGVRQARTVVDRALEGLGDTAARGPHALRHTAAT
+HLLDGGADLRSVQELLGHASLRTTQVYTHVSIDRLREGYRQAHPRA
+>4_832
+MTPSSSARPAPVPRDPSPRDTAWLEAFEEHLRHERNRSPQTVRAYLADLHSLIDHVAGTA
+GTSDTPAVDDDAPARHASSAPDVLAELDIEDLRGWLADMSGSGLARATLARRVAAVRTFT
+AWLRREGLRSDDPALRLRSPRPEGTLPHVLQEQQATRLLAAAQERVDAAAAGDDPAAHAL
+ALRDAALLELLYATGARVAELSALDVDDLEAGRGVVRLTGKGDRQRTVPYGAPAGRALQA
+WQRLGRPRLARPDSGPALFLGARGGRLGVRQARTVVDRALEGLGDTAARGPHALRHTAAT
+HLLDGGADLRSVQELLGHASLRTTQVYTHVSIDRLREGYRQAHPRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001380.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001380.fa
new file mode 100644
index 0000000000000000000000000000000000000000..534b25a25e0840d4f6d3cfb66f5857e7da606967
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001380.fa
@@ -0,0 +1,15 @@
+>0_1990
+MHILDSLDSNSLRSDIPEFAPGDTVKVHVNIIEGKTARVQVFQGYVMGRNGYGVRETFRV
+RKVSFGVGVERVFPVHSPVIDKIEVVTKGDVRRAKLYYMRDRHGKAARIREKRVDAK
+>1_876
+MHILDSFDKKTLRDDIPEFAPGDTVKVHVNIIEGKTARVQVFQGYVMGRQGHGVRETFRV
+RKVSFGIGVERVFPVHSPVIDKIEVVTKGDVRRAKLYYMRDRHGKAARIREKRVDAK
+>2_1887
+MHILDSFDKASLREDIPAFGPGDTVKVHVNIIEGKTARVQVFQGYVMGRQGHGVRETFRV
+RKVSFGVGVERVFPVHSPVIDKIEVLTKGDVRRAKLYYMRDRHGKAARIREKRADAK
+>3_604
+MHILDSFDKKTLRDDIPEFAPGDTVKVHVNIIEGKTARVQVFQGYVMGRQGYGVRETFRV
+RKVSFGIGVERVFPVHSPVIDKIEVVTKGDVRRAKLYYMRDRHGKAARIREKRADAK
+>4_824
+MHILDSFDKKTLRDDIPEFAPGDTVKVHVNIIEGKTARVQVFQGYVMGRQGYGVRETFRV
+RKVSFGIGVERVFPVHSPIIDKIEVVTKGDVRRAKLYYMRDRHGKAARIREKRVDAK
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001381.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001381.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ea7ce153c1183aaca4f08e1a69c4da66afb1bbe3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001381.fa
@@ -0,0 +1,29 @@
+>0_1991
+MRFDVVTIFPEYLAVLDVSLLGRARREGLVDVHVHDLRDFTFDRHRTVDDTPYGGGAGMV
+MKPEPWALALEHVAAQAPADAGERPVLLVPTPSGERFSQGLARELAQREHVAIACGRYEG
+IDERVFGWAEELFEVRLVSLGDYVLNGGEVAALAMIEAVGRLVPGVVGNPASLVEESHED
+GLLEYPVYTKPADWRGREVPPVLLSGDHGKVAAWRRAQQEERTRARRPDLWEALGRDG
+>1_875
+MRFDVVTIFPEYLAVLDVSLLGRARREGLVDVHVHDLRDFTFDRHRTVDDTPYGGGAGMV
+MKPEPWALALEHVAAQGPVSPAPAESSSAEPGDRPVLLVPTPSGERFTQRFARELAGREH
+VAIACGRYEGIDERVFGWAEELFEVRLVSLGDYVLNGGEVAALAMIEAVGRLVPGVVGNP
+ASLVEESHEDGLLEYPVYTKPADWRGRAVPPVLLSGDHGKVAAWRRAQQEERTRERRPDL
+WAAYDSED
+>2_1888
+MRIDVVSIFPEYMAVLDVSLLGKARREGLVDVHVHDLRDVTTDRHRTVDDTPYGGGAGMV
+MKPEPWALSLEAVAAASPMAAPAKPILMVPTPSGTPFTQATARELAQAEHLAFACGRYEG
+IDERVFGWAEDLFDVRLFSLGDYVLNGGEVAALAVIEAVGRLVPGVVGNPESLVEESHED
+GLLEYPVYTKPSMWRDREVPPVLLSGDHGRIAAWRRDQQEERTRIRRPDLWAAHHAGSAA
+ED
+>3_603
+MRFDVVTIFPEYLAVLDVSLLGRARREGLVDVHVHDLRDFTVDRHRTVDDTPYGGGAGMV
+MKPEPWALALEHVAAQGPVSPAPAESSSAEPGDRPVLLVPTPSGERFTQRFARELAGREH
+VAIACGRYEGIDERVFGWAEELFEVRLVSLGDYVLNGGEVAALAMIEAVGRLVPGVVGNP
+ASLVEESHEDGLLEYPVYTKPADWRGRAVPPVLLSGDHGKVAAWRRAQQEERTRERRPDL
+WAAYDSED
+>4_823
+MRFDVVTIFPEYLAVLDVSLLGRARREGLVDVHVHDLRDFTFDRHRTVDDTPYGGGAGMV
+MKPEPWALALEHVAAQGPVSPAPAESSSAEPGDRPVLLVPTPSGERFTQRFARELAGREH
+VAIACGRYEGIDERVFGWAEELFEVRLVSLGDYVLNGGEVAALAMIEAVGRLVPGVVGNP
+ASLVEESHEDGLLEYPVYTKPADWRGRAVPPVLLSGDHGKVAAWRRAQQEERTRERRPDL
+WAAYDSED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001383.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001383.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ff5485925ddbc747b62812cba2c9be4da420dbcc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001383.fa
@@ -0,0 +1,15 @@
+>0_1993
+MLTEALEHLVRGIVDTPEAVRVDARSQRRGDMLEVRVAPEDLGRVIGRQGRTATALRTVL
+DGLAGHPVRVDVVETDRRR
+>1_873
+MLTEALEHLVRGIVDTPEAVRVDARSQRRGDMLEVRVAPEDLGRVIGRQGRTATALRTVL
+DGLAGHPVRVDVVETDRRS
+>2_1890
+MLAEALEHLVRGIVDTPDAVRVASRPQRRGEMLEVRVAPEDLGRVIGRQGRTATALRTVL
+DGLAGHPVRVDVVETDRAR
+>3_601
+MLTEALEHLVRGIVDTPEAVRVDARSQRRGDMLEVRVAPEDLGRVIGRQGRTATALRTVL
+DGLAGHPVRVDVVETDRRS
+>4_821
+MLTEALEHLVRGIVDTPEAVRVDARSQRRGDMLEVRVAPEDLGRVIGRQGRTATALRTVL
+DGLAGHPVRVDVVETDRRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001391.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001391.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a6d2345a1443ff7775f7197e46c6161188ffd116
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001391.fa
@@ -0,0 +1,40 @@
+>0_2001
+MKVMPIYGTRPEAIKVAPIVKALQADERFECVVTVTGQHREMLDQVNELFGIVPDHDLNI
+IQPRQTLNGVFARTLDGLDAILEQERPDAVVVQGDTTTSTAGAVAAFNRGIPVVHAEAGL
+RSFDILSPFPEEANRKITSQISALHLPPTTVSRDNLLREAVAPEDVYVTGNTVIDALLEA
+VGHQVPFEDERLAELEASGRRVVLVTTHRRENQGDAMRGVGRALARLAADHPEVTFVLPA
+HRNPVVREAILPEIEGRANVLVTEPLAYGEFTHLLSVATVVLTDSGGVQEEAPSLGKPVL
+VMRENTERPEAVTAGTVRLIGTDEEVVVTEVTRLLTDEAAYTAMSQAVNPYGDGRAAERT
+VSAIAELLGVGERLPAFDGA
+>1_864
+MPKVMPIYGTRPEAIKVAPIVKALQADERFECVVTVTGQHREMLDQVNELFGIVPDHDLN
+IIQPRQTLNGVFARTLDGLDAVLEQERPDAVVVQGDTTTSTAGAVAAFNRGIPVVHAEAG
+LRSFDILSPFPEEANRKITSQISALHLPPTTVSRDNLLREAVAAEDIYVTGNTVIDALLE
+AVGHQVPFEDERLAELEASGRRVVLVTTHRRENQGDAMRGVGRALARLAADHPEVTFVLP
+AHRNPVVREAILPEIEGRENVLVTEPLAYGEFTHLLSVATVVLTDSGGVQEEAPSLGKPV
+LVMRENTERPEAVTAGTVRLIGTDEEVVVTEVTRLLTDEAAYTAMSQAVNPYGDGRAAER
+TVSAIAELLGVGERLPAFDGGDPA
+>2_1898
+MPLKIMPIYGTRPEAIKMAPIVNALRADDRFECFTTVTGQHREMLDQVNAIFGITPDADL
+DIMRPNQTLNGIMSVMLEGLDELLVRERPDAVVVQGDTTTSTAGAIAAFYRGIPVVHAEA
+GLRSGDLFSPFPEEANRKITSQIASLHLAPTSVSRANLEREAIDSAAITVTGNTVIDALL
+ETVAQQLPFTDPRLAELAERRAADPQSRVLLVTTHRRENQGEAMRGVGRALARLAQSHPN
+LTIVLPAHRNPVVREAVLPTLEGIDSVIVTEPLPYGEFTRMMDLADVVLTDSGGVQEEAP
+SLGKPVLVMRDNTERPEAVHAGTVRLIGTDEERLVEETSLLLTDPDAYAAMAHAVNPYGD
+GRAGLRTVAAIAQLLGVGDRLDEFGA
+>3_595
+MPKVMPIYGTRPEAIKVAPIVKALQADERFECVVTVTGQHREMLDQVNELFGIVPDHDLN
+IIQPRQTLNGVFARTLDGLDAVLEQERPDAVVVQGDTTTSTAGAVAAFNRGIPVVHAEAG
+LRSFDILSPFPEEANRKITSQISALHLPPTTVSRDNLLREAVAPEDVYVTGNTVIDALLE
+AVSHQVPFEDERLAGLEASGRRVVLVTTHRRENQGDAMRGVGRALARLAADHPEVTFVLP
+AHRNPVVREAILPEIEGRENVLVTEPLAYGEFTHLLSVATVVLTDSGGVQEEAPSLGKPV
+LVMRENTERPEAVTAGTVRLIGTDEEVVVTEVTRLLTDEAAYSAMSQAVNPYGDGRAAER
+TVSAIAELLGVGERMPEFAPDDRG
+>4_815
+MPIYGTRPEAIKVAPIVKALQADERFECVVTVTGQHREMLDQVNELFGIVPDHDLNIIQP
+RQTLNGVFARTLDGLDAVLEQERPDAVVVQGDTTTSTAGAVAAFNRGIPVVHAEAGLRSF
+DILSPFPEEANRKITSQISALHLPPTTVSRDNLLREAVAAEDIYVTGNTVIDALLEAVSH
+QVPFEDERLAELEASGRRVVLVTTHRRENQGDAMRGVGRALARLAADHPEVTFVLPAHRN
+PVVREAILPEIEGRENVLVTEPLAYGEFTHLLSVATVVLTDSGGVQEEAPSLGKPVLVMR
+ENTERPEAVTAGTVRLIGTDEEVVVTEVTRLVTDEAAYTAMSQAVNPYGDGRAAERTVSA
+IAELLGVGERLPAFDGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001396.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001396.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2e05355fd04237d16872087f78f1455b1d2b9500
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001396.fa
@@ -0,0 +1,26 @@
+>0_2013
+MHVTAETLERALTHRSYAYEQGGLPTNERLEFLGDSVLGYVVTDHIFTVHPDLAEGDLAR
+RRAAVVSTRALAKVARRIGIGPFVRLGTGEGRTGGADKDSILADTLEALIGAVHVDHGLV
+AASALVHRHVVPLLDEPDLVRESTDWKTVVAEAANRHGLGAVRYAIEGQGPAHDPRYRAT
+LVVGEREYGSAVASSKKQAERDAAAASWPALEADLPAAGR
+>1_846
+MHITAGTLERALTHRSFAYEQGGLPTNERLEFLGDSVLGYVVTDHIFTVYPDLAEGDLAR
+RRAAVVSTRALAKVARRIGIGPFVRLGTGERRTGGADKDSILADTLEALIGAVYVDHGAV
+AAAALVHRHVVPLLDEPDLLRESTDWKTVVAEAASRHGLGAVRYAIEGQGPAHDPRYRAT
+LVVGEREYGSAVASSKKQAERDAAAASWPALEADLPAAGR
+>2_1906
+MASPQTRTGSVPVPESSALLERLGVHITAGTLERALTHRSYAYEHGGLPTNERLEFLGDS
+VLGFVVTDHLFTAFPDLPEGDLARRRAAIVSTRALAKVARRIGVGPHVRLGTGETRTGGA
+DKDSILADTFEALIGAVYRDHGAVAAAALVHRHVVPLLDEPGLLRESTDWKTVVAEAASR
+HGLGEVRYDIEGQGPAHDPRFRATLTVGGRAFGSAVASSKKQAERDAAAEGWPELSATLP
+AAGS
+>3_577
+MHITAGTLERALTHRSFAYEQGGLPTNERLEFLGDSVLGYVVTDHIFTVYPDLAEGDLAR
+RRAAVVSTRALAKVARRIGIGPFVRLGTGERRTGGADKDSILADTLEALIGAVYVDHGAV
+AAAALVHRHVVPLLDEPDLLRESTDWKTVVAEAASRHGLGAVRYAIEGQGPAHDPRYRAT
+LVVGEREYGSAVASSKKQAERDAAAASWPALEAGLPAAGR
+>4_805
+MHITAGTLERALTHRSFAYEQGGLPTNERLEFLGDSVLGYVVTDHIFTVYPDLAEGDLAR
+RRAAVVSTRALAKVARRIGIGPFVRLGTGERRTGGADKDSILADTLEALIGAVYVDHGAV
+AAAALVHRHVVPLLDEPDLLRESTDWKTVVAEAASRHGLGAVRYAIEGQGPAHDPRYRAT
+LVVGEREYGSAVASSKKQAERDAAAASWPALEAGLPAAGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001406.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001406.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4d23fce4b662bc391188fe824e3f4babbb048787
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001406.fa
@@ -0,0 +1,20 @@
+>0_2023
+MESRPLRPLRRLVPLLTAIALGATACSGRVATVEAAPDAANPECAPAMVAMPDALGDAAL
+RPTDSQATAVWGDPAAVVLRCGAPVPGPTTDRCISVDGVDWVIRDEDENWRIVTYGRDPA
+VEVLFGKDKASSDTVMVGLASAVAQIDADGGCVNLQDATPVG
+>1_836
+MESRRLRRLVPLLTAIALGATACTGRVATVEAAPHAADPACAPAMVAMPDALGDLDLRPT
+DSQATAVWGDPAAVVLRCGAEVPGPTTDRCISVDGIDWVVRDEDENWRITTYGRDPAVEV
+LFGKDQASSDTVMVGLSSAVAQIEPSGGCVGVQDATPVG
+>2_1916
+MPRLPRPVILAPALAAAALGLTACSGPVVSVEAAPGAADPACAPAMVAVPDVLGGQDRRE
+TDSQATAAWGEPAAVVLRCGVPTPGPTTDRCVSVDDIDWVVRDEDDHWRITTYGRTPAVE
+AVFGKSEVSSDSVMTGLGSAVAQIPSQRRCVNIEDATPVG
+>3_567
+MESRRLRRLVPLLTAIALGATACTGRVATVEAAPHAADPACAPAMVAMPDALGDLDLRPT
+DSQATAVWGDPAAVVLRCGAEVPGPTTDRCISVDGIDWVVRDEDENWRITTYGRDPAVEV
+LFGKDQASSDTVMVGLSSAVAQIEPSGGCVSVQDATPVG
+>4_795
+MESRRLRRLVPLLTAIALGATACTGRVATVEAAPHAADPACAPAMVAMPDALGDLDLRPT
+DSQATAVWGDPAAVVLRCGAEVPGPTTDRCISVDGIDWVIRDEDENWRITTYGRDPAVEV
+LFGKDQASSDTVMVGLSSAVAQIESSGGCVSVQDATPVG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001410.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001410.fa
new file mode 100644
index 0000000000000000000000000000000000000000..aac7cb653668b404986f10ea9c43762087c51ab2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001410.fa
@@ -0,0 +1,45 @@
+>0_2027
+MAKLLTIHGGKPLTGEVTVRGAKNLVPKAMVAALLGNTPSVLRSIPEIKDVDVVSSLLEI
+HGVSVEWDKESGRITMDPAGVKSALTAEIDAHAGDSRIPILFCGPLMHAIGEAFIPDLGG
+CKIGDRPIDYHLAVLRNFGAVVDKRPGGISISAPKGLHGAKLELPYPSVGATEQVLLTAV
+KAEGITELKGAAVEPEIHDLIAVLQKMGAIITVQTDRTIRIEGVTEMRGYNHEALPDRNE
+SASWASAALATGGDIFVRGASQRDLTAFLNTYRKIGGEFDVVDDGIRFWHAGGDLNPLVL
+ETDVHPGFMTDWQQPLVVALTQAKGVSIVHETVYENRFGFTDALVRMGASIQLHRECLGS
+VPCRFGQRNFLHSAVISGPTPLHGVEIDIPDLRGGFSHLIAALAAEGTSTATGLEIINRG
+YEHFMDKLQGLGADVELSDRTR
+>1_832
+MAKLLTIHGGKPLTGEVTVRGAKNLVPKAMVAALLGNSPSVLRNIPEIKDVDVVSSLLEI
+HGVSVEWDKETGRITMDPAGVKSALTAEIDAHAGDSRIPILFCGPLMHAIGEAFIPDLGG
+CKIGDRPIDYHLAVLRNFGAVVDKRPGGISISAPKGLHGAKLELPYPSVGATEQVLLTAV
+KAEGITELKGAAVEPEIHDLIAVLQKMGAIITVQTDRTIRIEGVSEMRGYNHIALPDRNE
+SASWASAALATRGDIYVRGAEQRDLTAFLNTYRKIGGEFDVVDDGIRFWHAGGDLNPLVL
+ETDVHPGFMTDWQQPLVVALTQAKGVSIVHETVYENRFGFTDALVRMGASIQLHRECLGS
+VPCRFGQRNFLHSAVISGPTPLHGVEFDIPDLRGGFSHLIAALTAEGTSTATGLEIINRG
+YEHFMAKLEGLGADVELTERDR
+>2_1920
+MAKLLTIHGGKPLQGEVTVRGAKNLVPKAMVAALLGTGPSVLRSIPEIKDVDVVSSLLEI
+HGVTVDWDKESGTITMDPAGVKSALTAEIDAHAGDSRIPILFCGPLMHAIGEAFIPDLGG
+CKIGDRPIDYHLAVLRNFGAVVDKRPGGISISAPKGLHGAKLELPYPSVGATEQVLLTAV
+KAEGITELKGAAVEPEIHDLIHVLQKMGAIITVQTDRTIRIEGVPELRGYNHVAIPDRNE
+SASWASAALATKGDIFVRGASQRDLTAFLNTYRKIGGEFEVTDEGIRFWHGGGELNPLVL
+ETDVHPGFMTDWQQPLVVALTQATGVSIVHETVYENRFGFTDALVRMGASIQLHRECLGS
+VPCRFGQRNFLHSAVISGPTPLHGVDFDVPDLRGGFSHLIAALAAEGTSHATGLEIINRG
+YEHFMAKLQGLGADVELSERPR
+>3_563
+MAKLLTIHGGKPLTGEVTVRGAKNLVPKAMVAALLGNSPSVLRNIPEIKDVDVVSSLLEI
+HGVSVEWDKETGRITMDPAGVKSALTAEIDAHAGDSRIPILFCGPLMHAIGEAFIPDLGG
+CKIGDRPIDYHLAVLRNFGAVVDKRPGGISISAPKGLHGAKLELPYPSVGATEQVLLTAV
+KAEGITELKGAAVEPEIHDLIAVLQKMGAIITVQTDRTIRIEGVSEMRGYNHIALPDRNE
+SASWASAALATRGDIYVRGAEQRDLTAFLNTYRKIGGEFDVVDDGIRFWHAGGDLNPLVL
+ETDVHPGFMTDWQQPLVVALTQAKGVSIVHETVYENRFGFTDALVRMGASIQLHRECLGS
+VPCRFGQRNFLHSAVISGPKPLHGVEFDIPDLRGGFSHLIAALTAEGTSTATGLEIINRG
+YEHFMAKLEGLGADVELTERDR
+>4_791
+MAKLLTIHGGKPLTGEVTVRGAKNLVPKAMVAALLGNSPSVLRNIPEIKDVDVVSSLLEI
+HGVSVEWDKETGRITMDPAGVKSALTAEIDAHAGDSRIPILFCGPLMHAIGEAFIPDLGG
+CKIGDRPIDYHLAVLRNFGAVVDKRPGGISISAPKGLHGAKLELPYPSVGATEQVLLTAV
+KAEGITELKGAAVEPEIHDLIAVLQKMGAIITVQTDRTIRIEGVSEMRGYNHIALPDRNE
+SASWASAALATRGDIYVRGAEQRDLTAFLNTYRKIGGEFDVVDDGIRFWHAGGDLNPLVL
+ETDVHPGFMTDWQQPLVVALTQAKGVSIVHETVYENRFGFTDALVRMGASIQLHRECLGS
+VPCRFGQRNFLHSAVISGPTPLHGVEFDIPDLRGGFSHLIAALTAEGTSTATGLEIINRG
+YEHFMAKLEGLGADVEPTERDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001415.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001415.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e135ef578bc5497b1382d92498736e96993e8c43
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001415.fa
@@ -0,0 +1,40 @@
+>0_2032
+MTPAGGRPADGRTVGEVTEAQLLRVVLDGLAPAVRPGHWPPGTVAPGDDAALVPAPRGGT
+LVSTDAMGEGTDFLHRWPAGVRTRGHDAGWKAVAQNLSDVNAMGGTASALVTALTLPPTT
+PLAWVRSFAAGVVGAVDRLGAPGCRVAGGDLGTGERVHAAVTVLGDPHPAGVLRRAPAPA
+ARERVLAEGADLVHAQDAPGSSGAARSGALRPSAARPGPGWAAAGLALLLTDRDELARRA
+AALPPEDRPGARDLARAVRAQLRPRPPLALGPAAVEAGILTLMDVSDGLGRDAHRMAAAT
+GAAASAEAPPPVPWIDAAWLAEAAAPLRGVAALAGVSAESLVTGGGEDYGLLGLAWPETA
+LPAGFVRIGRLEPAGAPAPAGHRELPEAGWDPFGG
+>1_827
+MTVRDPAAAAGATVGDLTEAELLEVVLTGLAPAVRDGHWPAGTVAPGDDAALVPAPRGGT
+LISTDAMGEGTDFLHRWPAGPRTRGHDAGWKAVAQNLSDVNAMGGSASALVTALTLPPTT
+PVAWVRSFAAGIVGAVRHLGAPDCRVAGGDLGTGGRVHAAVTVLGDPHPGGVLCRTPAAA
+DRDRVLAEGADLVHAQAVPDGPRAAAPPGPGWAAAGLAVLLTDRAELERRADALPAADRP
+SPRELARAVRAQLRPRPPLALGPAAVTAGLLTLMDVSDGLGKDAHRMAAATGGAGPAPAP
+WLDEAWLAQAAAPLRRVAALAGTSPEALVTGGGEDYGLLGLAWPETELPRGFTRIGRLVP
+AGARAPAGHRPLPGSGWDPFAG
+>2_1925
+MSTPASTASAGGRPAPARTVGEASEAELLDLIQDALAPVARDVPWPAGTVPPGDDCAVVP
+APRGLVAVSTDAMGEGTDFLRRWPAGVRTRGHDVGWKAAAQNLSDVNAMGATPSALVTAL
+ALPAPTPLDWVASLAGGFTAAVRALGADRCRVAGGDLGAGESVQVAVTALGDPDPAGALR
+RAAGGERGARIARRGADLVLAAGSPRAAAAGEGQDSAWGPAGPGWAAAGLALLLTDRAVL
+TRRWADLAAHERPSARELARAVRGQLRPRPPLAAGPAAARAGLAALMDVSDGLGRDGHRL
+ARASSAPGAPLVPWVDRRWLAEAAEPLRRVASLAGTTPEALVLGGAEDYGLLGLAEPGLA
+LPSGFRRVGRLAPAGETPDGHVRLPEAGWDHFDAGRG
+>3_558
+MTVRDPAAAAGATVGDLTESELLEVVLTGLAPAVRDGHWPAGTVAPGDDAALVPAPRGGT
+LISTDAMGEGTDFLPRWPAGPRTRGHDAGWKAVAQNLSDVNAMGGTASALVTALTLPPTT
+PVAWVRSFAAGIVGAVRHLGAPDCRVAGGDLGTGGRVHAAVTVLGDPHPGGVLCRTPAAA
+DRDRVLVEGADLVHAQAVPDGPRAAAPPGPGWAAAGLTLLLTDRAELERRADALPAADRP
+SPRELARAVRAQLRPRPPLALGPAAVTAGLLTLMDVSDGLGKDAHRMAAATGGAGPAPAP
+WLDEAWLAEAAAPLRRVAALAGTSPEALVTGGGEDYGLLGLAWPETELPRGFTRIGRLVP
+AGARPPAGHRPLSESGWDPFAG
+>4_786
+MTMRDPAAAAGATVGDLTEAELLEVVLTGLAPAVRDGHWPAGTVAPGDDAALVPAPRGGT
+LISTDAMGEGTDFLHRWPAGPRTRGHDAGWKAVAQNLSDVNAMGGTASALVTALTLPPTT
+PVAWVRSFAAGIVGAVRHLGAPDCRVAGGDLGTGGRVHAAVTVLGDPHPGGVLRRTPAAA
+DRDRVLAEGADLVHAQAVPDGPRAAAPSGPGWAAAGLTLLLTDRAELERRADALPAADRP
+SPRELARAVRAQLRPRPPLALGPAAVTAGLLTLMDVSDGLGKDAHRMAAATGGAGPAPAP
+WLDEAWLAEAAAPLRRVAALAGTSPEALVTGGGEDYGLLGLAWPETELPRGFTRIGRLVP
+AGARPPAGHRPLSESGWDPFAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001417.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001417.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e5278e24b081120de749b6539c9bfff17d1db4bf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001417.fa
@@ -0,0 +1,50 @@
+>0_2035
+MDAETPVRVRFCPSPTGTPHVGLIRTALFNWGWARHTGGTLVFRIEDTDAKRDSEESYQQ
+LLEAMRWLGIDWDEGVEVGGPHEPYRQSQRGEIYAEVIEKLKAGGHIYPSYSSPEETEAR
+HRAAGRDPKLGYDGFDRDLTDEQVAAFEAEGRAPVWRLRMPDTDITFTDLVRGEITFKAG
+TVPDFVVVRADGSPLYTLVNPVDDALMGITHVLRGEDLLSSTPRQIALYRALHAVGVAAY
+MPVFGHLPYVMGEGNKKLSKRDPQANLFLHREHGFIREGLLNYLALLGWSLSADEDIFTP
+EQFVEHFDVHKVLANPARFDEKKAIAINGSHVRMLDADDFRERLVPYLHAAGLVDAEPTE
+REREILAAAAPLVQERVQLLGEAVEMLAFLFTADADVATSEGALKGMPADLGAAVAAARD
+ALAALPEDGFTTERIEEALRAALIDGLGLKPRQAFGPVRVAVTGRKVSPPLFESLEILGR
+DSALARLDRFAAEQGLDQGLPTDA
+>1_823
+MTDATAPVSENAPAPFADVPQVDAETPVRVRFAPSPTGTPHVGLIRTVLFNWGWARHTGG
+TLVFRIEDTDAKRDSEESYQQLLEAMRWLGIDWDEGVEVGGPHEPYRQSQRGQIYADVIE
+KLKAGGYIYPSYSSPEETEARHRAAGRDPKLGYDGHDRDLTDEQIAAFEAEGRAPVWRLR
+MPDEDITFTDLVRGEITFKAGSVPDFVVVRADGSPLYTLVNPVDDALMGITHVLRGEDLL
+SSTPRQIALYRALHAIGVARYMPVFGHLPYVMGEGNKKLSKRDPQANLFLHRDNGFIPEG
+LLNYLGLLGWSLSADEDIFTPQQFVEHFDVHKVLANPARFDEKKAIAINGTHVRMLDVAD
+FRDRLVPYLHAAGLVGEHLTEREMQILTAAAPLVQERVQLLGEAVEMLAFLFTADRDVRT
+AEGALKGMPADLGAAVAAAREALAALPEDEFTTERIEAALRAALIDGLGLKPRQAFGPVR
+VAVTGRKVSPPLFESLEILGRDSALARLDRFAAEQGLDQGRPTDA
+>2_1929
+MTEPTTASDTAAENAPAVFADVPQVDADTPVRVRFCPSPTGTPHVGLIRTALFNWGWARH
+TGGTLVFRIEDTDAKRDSEESYQQLLEAMRWLGIDWDEGVEVGGPHEPYRQSQRGEIYAE
+VIEKLKAGGHIYPSYSTPEETEARHRAAGRDPKLGYDGADRDLSAEQVEAYEAEGRRPVW
+RLRMPDADITFTDLVRGEITFKAGSVPDFVVVRADGSPLYTLVNPVDDALMGITHVLRGE
+DLLSSTPRQIALYRALHAIGVARYMPVFGHLPYVMGEGNKKLSKRDPQSNLFLHRDRGFI
+PEGLLNYLALLGWSLSADEDIFTPEQFVEHFDIHKVLANPARFDEKKATAINGTHVRMLE
+PADFRARLVPYLQAAGLVGERLTEREERILDAAAPLVHERVALLGEAVDMLAFLFTPDAE
+IATAEGALKGMPADLPTAVAAAREALAGIDEAEFTTAAVEEALRAALIDGLELKPRQAFG
+PVRVAVTGKKVSPPLFESLEILGKESALARLDRFAAEQAAA
+>3_554
+MTDATAPVSENAPAPFVDVPQVDAETPVRVRFAPSPTGTPHVGLIRTVLFNWGWARHTGG
+TLVFRIEDTDAKRDSEESYQQLLEAMRWLGIDWDEGVEVGGPHEPYRQSQRGQIYADVIE
+KLKAGGHIYPSYSSPEETEARHRAAGRDPKLGYDGHDRDLTDEQIAAFEAEGRAPVWRLR
+MPDEDITFTDLVRGEITFKAGSVPDFVVVRADGSPLYTLVNPVDDALMGITHVLRGEDLL
+SSTPRQIALYRALYAIGVARYMPVFGHLPYVMGEGNKKLSKRDPQANLFLHRDNGFIPEG
+LLNYLGLLGWSLSADEDIFTPQQFVEHFDVHKVLANPARFDEKKAIAINGTHVRMLDVAD
+FRDRLVPYLHAAGLVGEHLTEREMEVLTAAAPLVQERVQLLGEAVEMLAFLFTADRDVRT
+AEGALKGMPADLGAAVAAAREALAALPEEEFTTERIEAALRAALIDGLGLKPRQAFGPVR
+VAVTGRKVSPPLFESLEILGRDSALARLDRFAAEQGLDQDQPTDA
+>4_782
+MTDATAPVSENAPAPFVDVPQVDAETPVRVRFAPSPTGTPHVGLIRTVLFNWGWARHTGG
+TLVFRIEDTDAKRDSEESYQQLLEAMRWLGIDWDEGVEVGGPHEPYRQSQRGQIYADVIE
+KLKAGGHIYPSYSSPEETEARHRAAGRDPKLGYDGHDRDLTDEQIAAFEAEGRAPVWRLR
+MPDEDITFTDLVRGEITFKAGSVPDFVVVRADGSPLYTLVNPVDDALMGITHVLRGEDLL
+SSTPRQIALYRALYAIGVARYMPVFGHLPYVMGEGNKKLSKRDPQANLFLHRDNGFIPEG
+LLNYLGLLGWSLSADEDIFTPQQFVEHFDVHKVLANPARFDEKKAIAINGTHVRMLDVAD
+FRDRLVPYLHAAGLVGEHLTEREMEVLTAAAPLVQERVQLLGEAVEMLAFLFTADRDVRT
+AEGALKGMPADLGAAVAAAREALAALPEEEFTTERIEAALRAALIDGLGLKPRQAFGPVR
+VAVTGRKVSPPLFESLEILGRDSALARLDRFAAEQGLDQDQPTDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001423.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001423.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1e2ff2eeddd5f45997f66e6a8c246679149d84c7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001423.fa
@@ -0,0 +1,54 @@
+>0_2042
+MTDARAPYYLTTAISYPNGEPHIGHAYEYIATDAMARFQRLDGRDVRFLTGTDEHGQKME
+QTAQREGVTALELATRNAAVFKEMDDEVLDISYDRFIRTTDADHAEAVQEIWRRMEANGD
+VYLGSYAGWYSVRDERYFGEDETAVGEDGVRRAVETGTEVTWTEEESYFFRLSKYQEPLL
+EHYRRNPEFAAPRYRFNEVIRFVEDGLEDLSISRTSFDWGVPLPAPVDPDAEVADRRADH
+VTYVWVDALTNYLTGAGWPGRDPEAFGRYWPADLHVIGKDISRFHCIFWPAFLMSAGIEL
+PKRVMIHGFLNNNGAKMSKSLGNVVHPRDWVARYGLDAIRFFLLREFPFGADGSYSHEAV
+VGRKNADLANNLGNLAQRSLSMVAKNCEAAVPQPGPLTAEDEAVLAQVDALLERSRTAYA
+VQDFHDALEETWRVLGEVNAYFADQAPWVLRKTDEARMRTVLYVTLQAVRRVALLVQPVM
+PASASRLLDLLGVPAEGDAGRTGASGQGPRSFAAFHEDLVPGTALPKPEGVFPRHEEPAE
+A
+>1_817
+MTDARAPYYLTTAISYPNGEPHIGHAYEYIASDAMARFQRLDGRDVRFLTGTDEHGQKME
+QTAQQQGVSALELATRNAAVFKEMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGD
+IYLGSYAGWYSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQPLL
+DHYREHPDFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPDAADADRRADH
+VTYVWVDALTNYLTGAGWPAEDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLEL
+PRRVMIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLREFPFGADGSYSHEAV
+VSRKNADLANNLGNLAQRSLSMVAKNCGAAVPEPGEFTEADRAVLAQVDALLERSRSAYA
+VQDFHDALEETWRVLGEINAYFADQAPWVLRKTDEPRMRTVLYVTLQAVRRVALLAQPVM
+PGSASRLLDLLGVPAEGDAGRTGASGTGPRSFAAFHEDLVPGTPLPAPQPVFPRHEEPAE
+D
+>2_1941
+MTDTRAPYYVTTAIHYPNGEPHIGHAYEVVGADALARFMRLDGRDVFFLTGTDEHGQKMA
+QTAERLGVTPMELATRNSAAFKAMDDEVLGVSYDRFIRTTDEDHHRASQEIWRRMEANGD
+VYLDRYAGWYSVRDERFFDEDETEVREDGQRYAAETGTEVTWTEEESWFFRLSKYQEPLL
+ALYRDDPEFAAPRSRFNEVIRFVEGGLEDLSISRTSFDWGIDVPAPADGAASDAHHVMYV
+WVDALTNYLTGVGFPDESSESFRRFWPADVHVIGKDISRFHCVFWPAFLMSAGIELPKRV
+MIHGFLNNNGEKMSKSLGNVVAPRDWVARYGLDAVRFFLLREFPFGADGSYSHEAVVGRK
+NADLANNLGNLAQRSLSMVAKNCGGGVPEPGSLTEADTAVLAQVDALLEHSRAAYTVQDF
+HGALEETWRVLGEVNAYFADQAPWVLKKTDEPRMRTVLYVTLQAVRRVALLVQPVMPASS
+SRLLDLLGVPAEGDAGATAASNAGPRSFAAFGEDLMPGTALPRPEGVFPRHEDPAEG
+>3_548
+MTDARAPYYLTTAISYPNGEPHIGHAYEYIASDAMARFQRLDGRDVRFLTGTDEHGQKME
+QTAQQQGVSALELATRNAAVFKEMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGD
+IYLGSYAGWYSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQPLL
+DHYREHPDFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPDAADADRRADH
+VTYVWVDALTNYLTGAGWPADDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLEL
+PRRVMIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLREFPFGADGSYSHEAV
+VSRKNADLANNLGNLAQRSLSMVAKNCGAAVPEPGEFTEADRAVLAQVDALLERSRSAYA
+VQDFHDALEETWRVLGEINAYFADQAPWVLRKTDEPRMRTVLYVTLQAVRRVALLAQPVM
+PGSASRLLDLLGVPAEGDAGRTGASGTGPRSFAAFHEDLVPGTPLPAPQPVFPRHEEPAE
+D
+>4_776
+MTDARAPYYLTTAISYPNGEPHIGHAYEYIASDAMARFQRLDGRDVRFLTGTDEHGQKME
+QTAQQQGVSALELATRNAAVFKEMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGD
+IYLGSYAGWYSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQPLL
+DHYREHPDFAAPRYRFNEVIRFVEAGLEDLSISRTSFQWGIDLPAPADPDAADADRRADH
+VTYVWVDALTNYLTGAGWPAEDPEAFARYWPADLHVIGKDISRFHCIFWPAFLMSAGLEL
+PRRVMIHGFLNNNGAKMSKSLGNVVHPREWVARYGLDAIRFFLLREFPFGADGSYSHEAV
+VSRKNADLANNLGNLAQRSLSMVAKNCGAAVPEPGEFTEADRAVLAQVDALLERSRSAYA
+VQDFHDALEETWRVLGEINAYFADQAPWVLRKTDEPRMRTVLYVTLQAVRRVALLAQPVM
+PGSASRLLDLLGVPAEGDAGRTGASGTGPRSFAAFHEDLVPGTPLPAPQPVFPRHEEPAE
+D
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001429.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001429.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9262d345ade7c3205089ba589793608d016c9714
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001429.fa
@@ -0,0 +1,24 @@
+>0_2049
+MDSPTLQRRLRGVFDARVFNHGDYNVVYGQPSGSSSPLVIGYRHQPLEMLLCPFDPTSTP
+DDAPADAPAADAPEEDPHGPVAEPSSHGTDVVGVALGNVATVADTGSGYQVETVTGFRTW
+FDVPEHARVPVGDLTEDGTAGLDQAEDAVDFHAFMTAFMDELDRLYAAPEAGGTDVTGPD
+LHAR
+>1_797
+MTRADGSAYVGPMDTPTLHRRLRRVFDARVFNHGDYNVVYGQPSGSSSPLVIGYRHQPLE
+MLLCPFDPTSTPDDHDRRAPGVAEDDPHGPVTEASADRADVVEVGLANVATVADTGSGYQ
+VETVTGFRTWFDVPEHTRVPVGDLTEDGTAELDQAEDATDFHAFMTAFMDELDRLYATPE
+TDATDVTPPDLHGV
+>2_1947
+MDSPTLARRIRGAFDARVFNHGDYNLVYGQRSGGSLPLVIGYRHSPLEMLLCPLDPVEAV
+AAVPEEVALANVATVADTGSGYQVETVTGFRTWFEVVDRPRVPVGEASEDGLAELDQADD
+AADFHAFMTAFMDELDRLYAEPADPDLHPPQKSV
+>3_538
+MDTPTLHRRLRRVFDARVFNHGDYNVVYGQPSGSSSPLVIGYRHQPLEMLLCPFDPTSTP
+DDHDRRAPGVAEDDPHGPVTEASADRADVVEVGLANVATVADTGSGYQVETVTGFRTWFD
+VPEHTRVPVGDLTEDGTAELDQAEDATDFHAFMTAFMDELDRLYATPETDATDVTPPDLH
+GV
+>4_766
+MDTPTLHRRLRRVFDARVFNHGDYNVVYGQPSGSSSPLVIGYRHQPLEMLLCPFDPTSTP
+DDHDRRAPGVAEDDPHGPVTEASADRADVVEVGLANVATVADTGSGYQVETVTGFRTWFD
+VPEHTRVPVGDLTEDGTAELDQAEDATDFHAFMTAFMDELDRLYATPETDATDVTPPDLR
+GV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001433.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001433.fa
new file mode 100644
index 0000000000000000000000000000000000000000..04bf095c58be4a3afc85d9231e5ff28964b450e7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001433.fa
@@ -0,0 +1,98 @@
+>0_2061
+MGALARFSLRRRALVALVTVFIAVFGVLSAGQLKRELIPPLELPVISVSTLYPGASPEVV
+DSLVGEPLETALQAVEGLESSGSTSQASFNSIQLQFAYGTDLNRARSQVDRVVSNLASQL
+PEEAETSSFAGSVSDFPVVFLALSGDEDLNELRRRAEAVLAPRLQKLEGVRGADVLGGTE
+EHVSVVPDPEALAAAGLSTQDITTALEENAGLFPVGQVTEGESTYPVQAGAAVEDLEGLR
+GIVVTPAEGGQGAAPQDRTADGGPVGGGGGPPADAEATPAAPAEPAGDGEPRTLGEVAEV
+SLQAAEPTSVTRTDGADTLSVSVTATPDADLVAVSEAVREALPELESVVGGGADLTVVFD
+QAPFIQQSIDTLFQEGLLGLAFAVLVIAVFLLSLRSTLVTAVSIPLSLLAALIGVAVFGY
+SLNTLTLGALTISIGRVVDDAIVVVENIRRHLDLGADRRTAILIGTREVATAITASTLVS
+VAVFLPIAFVGGLAGELFRPFAVTATIALLASLVVALTIVPVLCWWFLRTPRRPAGDESP
+ADAAEGGAPAVPAGEHGHDAHPSAAGGWLARAYRPVLRWTQRHTVATLAGAVAVLAGTAA
+LVPLIPTNLIGDTGQNSFVVTADQEPGTSLEATAAAAGVIERTLLETEGVETVQWTAGTA
+GGPAGAFGGSSADRARFTVVTDENADQTALQDGVRADLAALEGVGEVSVSTQQGPGGGQD
+IEVSVSAPDPQALATAADEVAGALRGVEGAREVTTPAADVRPTFQVDVDTEAAARLGLTE
+EAVAGQAAAALQAVPVGDVRFGFEQFQVRLGDPDPVESLEALRQVAVQTGSGPVPLEELA
+SVERVDVPARVTSSNGERTAVVTVTPDDQDLGAVSRRVTEAVDGLALPEGVTATVGGAAE
+QQAATFRELGLALLAAIATVYVVMVATFNSLRQPLVLLVSIPFAATGVFLALLATGTALG
+LSTMIGLLMLVGIVVTNAIVLIDLINQYRRDRGMGLDEAIEVGALNRVRPVVMTALATIL
+AMVPMALGLTGHSGFISQPLAVAVVGGLLSSTLLTLVLVPVLYRLTEARGERRIQAERAE
+QARRDEEARRRAAEAEQAAAEQAESARAGLLARRRTGGAPAASAAAGMADDGGRRPGPLG
+RLRARLGGLVGRARRA
+>1_793
+MGALARFSLGRRALVALVTVFIAVFGVLSAGQLKRELIPPLELPVISVSTLYPGASPEVV
+DAQVGEPLETALQAVEGLESSRSTSQSGFNAVQLEFAYGTDLNRARSQVDRVVANLGPQL
+PEEAETSSFAGSVSDFPVVFLALSGDEDLNTLRRRAEDVLAPRLQKIDGVRGADVLGGTD
+ENVSVVPDPAALAAAGLTTSDITDALEENAGLFPVGQVTEGATTYPVQAGAAVEDLEGLR
+GIVVAPSGDGEPRTLDEVADVTLVAAAPTSLTRTDGVPTLSVSVTATPDADLVAVSQAVR
+DALPELASLVGGGADLTVVFDQAPFIQQSIDTLFQEGLLGLAFAVLVIAVFLLSVRSTLV
+TAVSIPLSLLAALIGVAAFGYSLNTLTLGALTISIGRVVDDAIVVVENIRRHLGLGADRR
+TAILDGTREVATAITASTLVSVAVFLPIAFVGGLAGELFRPFAVTATVALLASLVVALTI
+VPVLCWWFLRSPRRGAETTAAPAVPGDRPVAAGGWLTRAYRPVLRWTQRHTVVTLAAALA
+LLAGTAALVPLIPTNLLGDSGQNSFVVTAEQEPGTSLETTAAAAERIERVLLDTDGVETV
+QWTAGTAAGPMGAFGGSSADRARFTVVTDPDADQVALQDGVRAELTGLDGVGDVSVSTQQ
+GPSGGQDIEVAVSAPDPQALTAAADQVAEALRPVEGAREVTTPASDLRPTFQVDVDTVAA
+ARLGLTEEAVAGQAAAALQAVPVGDVRFGFESFAVQLGDPEPVESLDALRQVPVETAEGP
+VPLADLAEVSRVSVPARVTSSNGERTAVVTVTPDDEDLGAVSRRVTQAVAELDLPEGVTA
+AVGGAAEQQAQTFRDLGLALLAAVATVYVVLVATFNSLRQPLVLLVSIPFAATGVFLALL
+ATGTPLGLSTMIGLLMLVGIVVTNAIVLIDLINQYRRDRGMPLDEAIEVGALNRVRPVVM
+TALATVLAMTPMALGVTGHAGFISQPLAVAVVGGLVSSTLLTLVLVPVLYRLTEVRGERR
+LQEERRVAAAWEAQRVAAERAAKQERRAEQGSAAPSELDAGRLGRLRQRLRRRWRRA
+>2_1951
+MGALARFSLSRRALVALVTAFIAVFGVLSAGLLKRELIPSLELPVISVSTTYPGASPEVV
+DAEIGQPLEQALQAVEGLDSSASTSATSFNSVQLRFRYGTDLTRARSQVDRVISNLASQL
+PEEAQTTSFAGSVSDFPVVFLALSGDEDLNALKRRAEDVLVPRLQRIDGVRGAQVLGGTE
+EYVSVVPDAAKLAAAGLTTQDVTTALEENAGLFPIGQATSGTVTYPVQAGAPVGSVADLE
+QVTVTPGGGQSSTGAADQGAGAGAGGGPGAATGTPARLGDVAAVSMQAADPTSVTRTDGA
+PTLSLSVTATPDADLVAVSHAVADALPELESLAGSGAKLTVVFDQAPFIEQSIRTLFVEG
+LLGLAMAILVIAVFLLSARSTMVTAVSIPLSLLTALIGVAVFGYSLNTLTLGALTISIGR
+VVDDAIVVVENIRRHLGLGADKRTAILEGTREVATAITASTLVSVAVFLPIAFVDGLAGE
+LFRPFAVTTSIALLASLVVALTIVPVLCWWFLRAPRAAAAPGGAEGVSSPVEDAAQDTWL
+ARAYRPVLRWTQRHAVATLAGAAALLAGTVALAPLIPTNLLGDSGQNSFVVTAQQAPGTS
+LEATTAIAGRIEAALRDTPGVRTVQFTAGSAGGAMGAFGRGSADRATFTVVTDPDADQTA
+LQDEVRGRLAGLGDVGEVDVSAQQGPAGGQDITVSVTAPDPEALADGIDRVAEALRGLDG
+VLQASTPSSDVRPTFQVDVDTLAAAERGLTEKAVSGQVAAALQAVPAGTVRFGFQEFTVR
+LGDPDPVESLGALRAVPISTPSGPVPLSELADVRRADVPAQVTSSNGQRTAEVTVTPDPA
+DLGGVSRRVSDALEGVALPDGVEATVGGAATEQAKTFRDLGLALLAAIAAVYVVMVATFN
+SLRQPFVLLVSIPFAATGVVLALLASGTALGVATMIGLLMLVGIVVTNAIVLIDLINQYR
+RRHGMALDEAIERGALHRVRPVVMTALATVLAMTPMALGITGHAGFISQPLAVAVVGGLA
+SSTVLTLVLVPVLYRLTEARGERRIQAERAAREAEERELAEREARERELAEREAAARAVA
+GPAAAAHPAPAGRLSRRRGWRGWIRRATS
+>3_534
+MGALARFSLGRRALVALVTVFIAVFGVLSAGQLKRELIPPLELPVISVSTLYPGASPEVV
+DAQVGEPLETALQAVEGLESSRSTSQSGFNAVQLEFAYGTDLNRARSQVDRVVANLGPQL
+PEEAETSSFAGSVSDFPVVFLALSGDEDLNTLRRRAEDVLAPRLQKIDGVRGADVLGGTD
+ENVSVVPDPAALAAAGLTTSDITDALEENAGLFPVGQVTEGATTYPVQAGAAVEDLEGLR
+GIVVAPSGDGEPRTLDEVADVTLVAAAPTSLTRTDGVPTLSVSVTATPDADLVAVSQAVR
+DALPELASLVGGGADLTVVFDQAPFIQQSIDTLFQEGLLGLAFAVLVIAVFLLSVRSTLV
+TAVSIPLSLLAALIGVAAFGYSLNTLTLGALTISIGRVVDDAIVVVENIRRHLGLGADRR
+TAILDGTREVATAITASTLVSVAVFLPIAFVGGLAGELFRPFAVTATVALLASLVVALTI
+VPVLCWWFLRSPRRGAETTAAPAVPGDRPVAAGGWLTRAYRPVLRWTQRHTVVTLAAALA
+LLAGTAALVPLIPTNLLGDSGQNSFVVTAEQEPGTSLETTAAAAERIERVLLDTDGVETV
+QWTAGTAAGPMGAFGGSSADRARFTVVTDPDADQVALQDGVRAELTGLDGVGDVSVSTQQ
+GPSGGQDIEVAVSAPDPQALTAAADQVAEALRPVEGAREVTTPASDLRPTFQVDVDTVAA
+ARLGLTEEAVAGQAAAALQAVPVGDVRFGFESFAVQLGDPEPVESLDALRQVPVETAEGP
+VPLGDLAEVSRVPVPARVTSSNGERTAVVTVTPDDEDLGAVSRRVTQAVAELDLPEGVTA
+AVGGAAEQQAQTFRDLGLALLAAVATVYVVMVATFNSLRQPLVLLVSIPFAATGVFLALL
+ATGTPLGLSTMIGLLMLVGIVVTNAIVLIDLINQYRRDRGMTLDEAIEVGALNRVRPVVM
+TALATILAMTPMALGITGHAGFISQPLAVAVVGGLVSSTLLTLVLVPVLYRLTEVRGERR
+LQEERRVAAEREAQRVAAERAAEQARRAEERWAAPSELDAGRLGRLRQRLRRRWRRA
+>4_762
+MGALARFSLGRRALVALVTVFIAVFGVLSAGQLKRELIPPLELPVISVSTLYPGASPEVV
+DAQVGEPLETALQAVEGLESSRSTSQSGFNAVQLEFAYGTDLNRARSQVDRVVANLGPQL
+PEEAETSSFAGSVSDFPVVFLALSGDEDLNTLRRRAEDVLAPRLQKIDGVRGADVLGGTD
+ENVSVVPDPAALAAAGLTTSDITDALEENAGLFPVGQVTEGATTYPVQAGAAVEDLEGLR
+GIVVAPSGDGEPRTLDEVADVTLVAAAPTSLTRTDGVPTLSVSVTATPDADLVAVSQAVR
+DALPELASLVGGGADLTVVFDQAPFIQQSIDTLFQEGLLGLAFAVLVIAVFLLSVRSTLV
+TAVSIPLSLLAALIGVAAFGYSLNTLTLGALTISIGRVVDDAIVVVENIRRHLGLGADRR
+TAILDGTREVATAITASTLVSVAVFLPIAFVGGLAGELFRPFAVTATVALLASLVVALTI
+VPVLCWWFLRAPRRGAETTAAPAVPGDRPVAAGGWLTRAYRPVLRWTQRHTVVTLAAALA
+LLAGTAALVPLIPTNLLGDSGQNSFVVTAEQEPGTSLETTAAAAERIERVLLDTDGVETV
+QWTAGTTAGPMGAFGGSSADRARFTVVTDPDADQVALQDGVRAELTGLDGVGDVSVSTQQ
+GPSGGQDIEVAVSAPDPQALTAAADQVAEALRPVEGAREVTTPASDLRPTFQVDVDTVAA
+ARLGLTEEAVAGQAAAALQAVPVGDVRFGFESFAVQLGDPEPVESLDALRQVPVETAEGP
+VPLGDLAEVSRVPVPARVTSSNGERTAVVTVTPDDEDLGAVSRRVTQAVAELDLPEGVTA
+AVGGAAEQQAQTFRDLGLALLAAVATVYVVMVATFNSLRQPLVLLVSIPFAATGVFLALL
+ATGTPLGLSTMIGLLMLVGIVVTNAIVLIDLINQYRRDRGMTLDEAIEVGALNRVRPVVM
+TALATILAMTPMALGITGHAGFISQPLAVAVVGGLVSSTLLTLVLVPVLYRLTEVRGERR
+LQEERRVAAEREAQRVAAERAAEQARRAEERWAAPSELDAGRLGRLRQRLRRRWRRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001435.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001435.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cca428f618749d266ce74158a4afc6712eab37d6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001435.fa
@@ -0,0 +1,40 @@
+>0_2063
+MLLLHTSDWHLGRSFHGTGLLEGQRQVLDALVDTVRERGVDAVLLAGDVYDRALPSADAV
+ALLDATLARLREAGAQVVLTSGNHDSAVRLGFGAGLLSAAGVHVLTDPARLDEPVLLEDA
+AGERAAVYGVPYLEPRHLGQAWEVDPTHTGVMTEAVRRIRADLEDRRAGSPTPLAGVVLA
+HLFAAGGDASDSERDIGAGGSSWPASPAPADPAGRDAGCGAEPEGLVGTLGQVPVTVFDG
+LDYAALGHLHGRQTMAEHVRYSGSPLPYSFSEAKHVKGGWLVHVHGGAVTEVEPVDWRAG
+RRLAVLADRIGPLLDSPEYAFAENRWVQATVTDPERPEKALERLRSRFPHLLVFRHEPEG
+GRPERVRTYAQALRQAPTDLALTTGFVDHVRGRPASAEESALLDDALTASRTREAQA
+>1_791
+MILLHTSDWHLGRSFHGTGLLEAQEEVLDALVATVTERGVDAVLLAGDVYDRALPPADAV
+RLLDRTLTRLHAAGAQVVLTSGNHDSAVRLGFGGGLLAAAGVHVRADAVELDRPVLLTEP
+GVDGGAGQTVAVYGIPYLEPRHQGPAWGVEPHHTAVLTEAVRRVHADLAARRAETPEPVA
+AVVLAHLFAAGGHGSESERDIGEGEHVEPDAPPEMLVGTLGQVPVSVFDGLDYAALGHLH
+GRQRLAEHVRYSGSPLPYSFSEAGHRKGGWLVHVTGGAVTDVEAVDWDAGRRLAVLSGPI
+EDLLESPEFAWAEQCWVQVTVTDDERPERALERLKTRFPSVLVFRHEPAGGRRARERTYA
+QVLRQAPSDHALAVGFVDHVRQRPASGAEQDLLRDALEAARAGEVRA
+>2_1953
+MLLLHTSDWHLGRSFHGTGLLDSQRRVLAQLVDTVRERGVDAVLLAGDVYDRALPAADAV
+TLLDETLAALRAAGSQVVLTSGNHDSAIRLGFGSALMAAGGVHVRTDPERLAEPVLLEDA
+AGERAAVYGIPYLEPRHLGEAWGVDPHHTAVMTEAVRRVLADLEERRAADGPLAGVVLAH
+LFAAGAEGTESERDIGEGPHTDAHGTAPEGLVGTLGQVPVSVFSGLDYAALGHLHGRQTM
+APHVRYSGSPLPYSFSEARHTKGGWLVHVAGGAVTEVESVDWDAGRRLAVLEDRIQPLLD
+SPGYAWAEDRFVQATVTDPERPEKALERLRSRFPHLLVFRHEPEGGHAARERTYAQALRQ
+APDDLALTTGFVDHVRGRPASEAERELLDEALTASRIGEAQA
+>3_532
+MILLHTSDWHLGRSFHGTGLLEAQEEVLDALVATVTERGVDAVLLAGDVYDRALPPADAV
+RLLDRTLTRLHAAGAQVVLTSGNHDSAVRLGFGGGLLAAAGVHVRADAAELDRPVLLTEP
+GVDGGAGQTVAVYGIPYLEPRHQGPAWGVEPHHTAVLTEAVRRVHADLAARRAETPEPVA
+AVVLAHLFAAGGHGSESERDIGEGEHVEPDAPPEMLVGTLGQVPVSVFDGLDYAALGHLH
+GRQRLAEHVRYSGSPLPYSFAEAGHRKGGWLVHVTGGAVTDVEAVDWDAGRRLAVLSGPI
+EDLLESPEFAWAEQCWVQVTVTDDERPERALERLKTRFPSVLVFRHEPAGGRRARERTYA
+QVLRQAPSDHALAVGFVDHVRQRPASEAEQDLLRDALEAARAAEVRA
+>4_760
+MILLHTSDWHLGRSFHGTGLLEAQEEVLDALVATVTERGVDAVLLAGDVYDRALPPADAV
+RLLDRTLTRLHAAGAQVVLTSGNHDSAVRLGFGGGLLAAAGVHVRADAAELDRPVLLTEP
+GVDGGAGQTVAVYGIPYLEPRHQGPAWGVEPHHTAVLTEAVRRVHADLAARRAETPEPVA
+AVVLAHLFAAGGHGSESERDIGEGEHVEPDAPPEMLVGTLGQVPVSVFDGLDYAALGHLH
+GRQRLAEHVRYSGSPLPYSFSEAGHRKGGWLVHVTGGAVTDVEAVDWDAGRRLAVLSGPI
+EDLLESPEFAWAEQCWVQVTVTDDERPERALERLKTRFPSVLVFRHEPAGGRRARERTYA
+QVLRQAPSDHALAVGFVDHVRQRPASGAEQDLLRDALEAARAGEVRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001436.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001436.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a06b7322a860ac3ec51fa5bdc2e3be4e967b6c5e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001436.fa
@@ -0,0 +1,40 @@
+>0_2064
+MTETPAAPSLPGPEHATRVAALLAAGAAGDALGYTVEFDADAAVRARHGAEGLTTGEAAL
+AVVGGEALPISDDTQMTLYVLDGLLEWIEWQNDGQAADPAACVWLACLRWWATQHGGALP
+DGAPPVPPRWLEDHPELRARRAPGNACLSGLDSAAMGLPGDPRNPDSKGCGTVMRSAPYG
+MVPGLEDVHVVSFARQGAVLTHGHPTAWVAAAAYSLMIAALLRGAGLEDAVAHARVWVDS
+LDPAEGGETAAALASAVELAASPADDAGRPGTLPAALGEGWVAEEALAIAVHAALVAQAR
+HEDPADMLALALRIGANHAGDSDSTASLAGQLLGAAHGPAVFGADAAADGPAGLVPAWVA
+EREVVAEAARRWSAATT
+>1_790
+MSATAPEPTASSSTPLPGPEHADRVLALLAAGAAGDALGGVVEFTPASGIAAVHGPAGVT
+DAADLLAQEGAHALPITDDTQLTLYVLDGLLEWIEWQNDGVPADPAACVWLACLRWFATQ
+DGALPEGAPPAPPRWIDAHAELKVRRAPGTACLTGLAEPGMGLPGDPHNPGSKGCGTVMR
+SAPYGMVPGLEDPHVVSLARQGAVLTHGHPTAWVAAAAYALVIAALLRGLDLAAAVAHAR
+AWLDTLGEEAEETRAAVTAAVDLAGTVDADPGAPGALPTALGEGWVAEEALAIALYAALT
+AQAAHPADPAAALALALRIGVNHDGDSDSTASLAGQVLGAAHGTAVFGAHDPADRAAAEA
+SVPGWIAEREVVLEAARRWSAATT
+>2_1954
+MTDAAPSPRTDVSYPSRVLGLLAAGAAGDALGYAVEFDSVDRILGRLGAAGVTDGPALAA
+VSGVSALPVSGDTQMTLYVLDGMLEWIEWQNAGQASDPAACVWLACLRWLRTQDGALPDG
+APPAQDRWIDAHTELHAQRAPGMACLSGLRSSGMGVVPDPKNPDSKGCGAVMRSAPYGMV
+PGLEDHHVASFARQGAVLTHGHPTGWTAAAAFALTVSALFDGAELRGALEHPRTWLDSTG
+EDGAETRAALDGALAEAARAVEAGDDVGAPGTLPASLGEGWVAEEALAIAAYAALVAEAR
+AEDPAAALGLALRIGANHDGDSDSTAALAGQLVGARHGMAVFGSRGQDADSVPAWITERE
+VVAEAARRWIAATT
+>3_531
+MSATAPEPTASSSTPLPGPEHADRVLALLAAGAAGDALGGVVEFTPASGIAAVHGPAGVT
+DAADLLAQQGAHALPITDDTQLTLYVLDGLLEWIEWQNDGVPADPAACVWLACLRWFATQ
+DGALPEGAPPAPPRWIDAHAELKVRRAPGTACLSGLAEPGMGLPGDPHNPGSKGCGTVMR
+SAPYGMVPGLEDPHVVSLARQGAVLTHGHPTAWVAAAAYALVIAALLRGLDLAAAVAHAR
+AWLDTLGEEAEETRAAVTAAVDLAGTVDADPGAPGALPTALGEGWVAEEALAIALYAALT
+AQAAHPADPAAALALALRIGVNHDGDSDSTASLAGQVLGAAHGTAVFGAHDPADRAAAEA
+SVPGWIAEREVVLEAARRWSAATT
+>4_759
+MSATAPEPTASSSTPLPGPEHADRVLALLAAGAAGDALGGVVEFTPASGIAAVHGPAGVT
+DAADLLAQEGAHALPITDDTQLTLYVLDGLLEWIEWQNDGVPADPAACVWLACLRWFATQ
+DGALPEGAPPAPPRWIDAHAELKVRRAPGTACLTGLAEPGMGLPGDPHNPGSKGCGTVMR
+SAPYGMVPGLEDPHVVSLARQGAVLTHGHPTAWVAAGAYALVIAALLRGLDLAAAVAHAR
+AWLDGLGEEAAETRAAVTAAVDLAGTVDADPGAPGALPTALGEGWVAEEALAIALYAALT
+AQAVHPADPAAALALALRIGVNHDGDSDSTASLAGQVLGVAHGTAVFGAHDPADRAAAEA
+SVPGWVAEREVVLEAARRWSAATT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001438.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001438.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7fc1c5bbf5567a0181f49ed8d418bfa63d8dc3f2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001438.fa
@@ -0,0 +1,25 @@
+>0_2066
+MSGAATGVPEGARVVLATHNAGKVRELRQLLEGAVPGLDASVAVVDAGAVGAPDIVEDGV
+TFAQNALKKARAVAAHTGLIAVADDSGLAVDVLHGAPGIFSARWAGRHGDDRANLELLLA
+QLADVPDAHRGAEFVCAAALAVPSSADARGTHAIHVEHVEHGRLRGTLLRAPVGDGGFGY
+DPILRPDGRDESTAQLSAADKNAISHRGHAFRALLPYLVDALDARA
+>1_788
+MSAPASSSAGLPEGARVVLATHNAGKVRELRQLLAGAVPGLEVETAVVDAGAVGAPDVVE
+DGVTFAQNALKKARAVAAHTGLIAVADDSGLAVDVLHGAPGIFSARWAGRHGDDRANLEL
+LLAQLADVPDEHRGAQFVCAAALAVPSGPDAAGARAIHVEHVEHGRLPGTLLREPVGDGG
+FGYDPILRPEGRDVSTAQLSPEDKNAISHRGHAFRALLPYLVDALDARP
+>2_1956
+MSTPTAPVAPAGARVVLATHNAGKVRELRSLLAEALPALDVETAVVDAGAVGAPDVVEDG
+VTFEQNALKKARAVAAHTGLIAVADDSGLAVDVLGGAPGIFSARWAGRHGDDKANLELLL
+AQLGDVPDEHRGAAFVCAAALATPRGGDHVELGRMPGMLLREPVGDGGFGYDPILRPAGE
+DRSTAQLSSAEKNAISHRGQAFRALLPHLVAALSADS
+>3_529
+MSAPASSSAGLPEGARVVLATHNAGKVRELRQLLAGAVPGLDVEAAVVDAGAVGAPDVVE
+DGVTFAQNALKKARAVAAHTGLIAVADDSGLAVDVLHGAPGIFSARWAGRHGDDRANLEL
+LLAQLADVPDEHRGAQFVCAAALAVPSGPDAAGARAIHVEHVEHGRLPGTLLREPVGDGG
+FGYDPILRPEGRDVSTAQLSPEDKNAISHRGHAFRALLPYLVDALDARP
+>4_757
+MSAPASSSAGLPEGARIVLATHNAGKVRELRQLLAGAVPGLDVEAAVVDAGAVGAPDVVE
+DGVTFAQNALKKARAVAAHTGLIAVADDSGLAVDVLHGAPGIFSARWAGRHGDDRANLEL
+LLAQLADVPDEHRGAQFVCAAALAVPSGPDAAGARAIHVEHVEHGRLPGTLLREPVGDGG
+FGYDPILRPEGRDVSTAQLSPEDKNAISHRGHAFRALLPYLVDALDARP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001439.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001439.fa
new file mode 100644
index 0000000000000000000000000000000000000000..af6a2ec77c8a60d6eb0e449086d40a73c15f2699
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001439.fa
@@ -0,0 +1,30 @@
+>0_2067
+MTSPASTAPRPDGRAVDELRPITITRGWSRQAEGSALIEFGDTRVLCTASFTQGVPRWLK
+GEGTGWVTAEYAMLPRATNERNQRESVKGRIGGRTHEISRLIGRSLRAVIDLSALGENTI
+VLDCDVLDADGGTRTAAITGAYVALAEAVAWARREGILRKDAEVLKDSVAAVSVGIVDGV
+PVLDLPYVEDVKAETDMNVVVTGAGEFVEVQGTAEGVPFSRAELDTLLDLALTGTGELAR
+IQAETLAGAAGSAEAQA
+>1_787
+MSSPAPTAPRPDGRAVDELRPITITRGWSRQAEGSALIEFGNTRVLCTASFTEGVPRWLK
+GEGTGWVTAEYAMLPRATNERSQRESVKGRIGGRTHEISRLIGRSLRAVIDLSALGENTI
+VLDCDVLDADGGTRTAAITGAYVALAEAVAWARREGILAKGAAVLKDSVAAVSVGIVDGV
+PVLDLPYVEDVKAETDMNVVVTGAGEFVEVQGTAEGAPFTRAELDTLLDLALIGTGELAR
+IQAETLAAATEDRA
+>2_1957
+MTESSPSTSPSVTRQDGRAVDELRPITITRGFSRQAEGSALIEFGGTRVLCTASFTEGVP
+RWLKGEGTGWVTAEYAMLPRATNERSQRESVKGRIGGRTHEISRLIGRSLRAVIDLSALG
+ENTIVLDCDVLDADGGTRTASITGAYVALAEAVAWAQGRGILKKDARVLTDSVSAVSVGI
+IDGVPMLDLPYVEDVKAETDMNVVVTGSGDFVEVQGTAEGVPFRRAELDVLLDLALAGTA
+ELSRIQAETLAGDVAGRA
+>3_528
+MSSPAPTAPRPDGRAVDELRPITITRGWSRQAEGSALIEFGNTRVLCTASFTEGVPRWLK
+GEGTGWVTAEYAMLPRATNERSQRESVKGRIGGRTHEISRLIGRSLRAVIDLSALGENTI
+VLDCDVLDADGGTRTAAITGAYVALAEAVAWARREGILAKGAAVLKDSVAAVSVGIVDGV
+PVLDLPYVEDVKAETDMNVVVTGAGEFVEVQGTAEGAPFTRAELDTLLDLALIGTGELAR
+VQAETLAAATEDRA
+>4_756
+MSSPAPTAPRPDGRAVDELRPITITRGWSRQAEGSALIEFGNTRVLCTASFTEGVPRWLK
+GEGTGWVTAEYAMLPRATNERSQRESVKGRIGGRTHEISRLIGRSLRAVIDLSALGENTI
+VLDCDVLDADGGTRTAAITGAYVALAEAVAWARREGILAKGAAVLKDSVAAVSVGIVDGV
+PVLDLPYVEDVKAETDMNVVVTGAGEFVEVQGTAEGAPFTRAELDTLLDLALIGTGELAR
+IQAETLAAATEDRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001443.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001443.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0152fbdb933b331bc95d7e5db64d983d422daa2e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001443.fa
@@ -0,0 +1,15 @@
+>0_2071
+MSVLTSHDPTAPRAAGPAPGEAVPGGATDTAVLERPREDLALDRPWNVVVWNDPVNLMSY
+VAYVFRTHFGYSESRAHRLMLEVHERGRSVVATGTREKAELHVGAMHGYGLWATLEQAED
+>1_783
+MSVLTRHDPSAPRAVRPAPGESVPAGATDTALLERPHEDTARDRPWNVVVWNDPVNLMSY
+VAYVFRTHFGYSAAKAQRLMLEVHERGRSVVATGTKEKAELHVGAMHGYGLWATLEQAED
+>2_1961
+MPHPAPPAPGADTALLERPREDLAAARPWHVVVWNDPVNLMSYVAYVFRSHFGYSAARAQ
+SLMLEVHERGRSVVFTGSREVAEGHVTAMHGFGLWATLEQAED
+>3_524
+MSVLTRHDPSAPRAVRPAPGESVPAGATDTALLERPHEDTARDRPWNVVVWNDPVNLMSY
+VAYVFRTHFGYSAAKAQRLMLEVHERGRSVVATGTKEKAELHVGAMHGYGLWATLEQAED
+>4_752
+MSVLTRHDPSAPRAVRPAPGESVPAGATDTALLERPHEDTARDRPWNVVVWNDPVNLMSY
+VAYVFRTHFGYSAAKAQRLMLEVHERGRSVVATGTKEKAELHVGAMHGYGLWATLEQAED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001447.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001447.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7c1085d0c70b8c2481ca80ec63a25555f5b9b206
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001447.fa
@@ -0,0 +1,15 @@
+>0_2076
+MSVTGEPDLTDPFSPAGGGTSVLEREQQLQDVEPGDHERFAHYVRKEKITESAVTGAPVI
+ALCGKVWVPGRDPQKFPVCPTCQEIYEGLREPQDGDDAGAGGGRRGGWFGGRGRG
+>1_778
+MSVTGEPDLNDPFAPAGGGTSVLEREELRQEIEPGDHERFAHYVRKEKITESAVTGAPVI
+ALCGKVWVPGRDPNKFPVCPTCKEIYEGLREPQDGGDGDGGGKRGGWFGGRGRG
+>2_1968
+MSISDPFQNDPLSPSGGGTSVLEREEQLQDVEPGDHERFAHYVRKEKIMESALSGEPVIA
+LCGKVWVPGRDPNKFPVCPLCQEIYDGLRDPQDGDDAGSGGGRRGGFFGRGRG
+>3_518
+MSVTGEPDLNDPFAPAGGGTSVLEREELRQEIEPGDHERFAHYVRKEKITESAVTGAPVI
+ALCGKVWVPGRDPNKFPVCPTCKEIYEGLREPQDGGDGDGGGKRGGWFGGRGRG
+>4_745
+MSVTGEPDLNDPFAPAGGGTSVLEREELRQEIEPGDHERFAHYVRKEKITESAVTGAPVI
+ALCGKVWVPGRDPNKFPVCPTCKEIYEGLREPQDGGDGDGKRGGWFGGRGRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001448.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001448.fa
new file mode 100644
index 0000000000000000000000000000000000000000..dbcb9f9ff504f5310506eef6a60baecedf4b98db
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001448.fa
@@ -0,0 +1,50 @@
+>0_2077
+MALTLVRLRWALTLNQWRRSTFTLVLAVLGALYVLGLAVFVVVMLVTFLPDAWVVDRGTV
+TVIVASALALGWLLIPPFITGVDATLDPHSFVLFPVRARTLIAGLTLSAFTTPSGLATLI
+VMLGTGLSWWDIPAALAAALVGGALTAVTAVASGYGLAGLMAAYAGRRRVREVLSIALLI
+PVMLSGVIVAQTLDSLGDLFDVAPRVAAVAAWTPFGAGPAAAWAVAEGQGLRAAAHLLVA
+AAWCLAALALWHLAVRRTVEPVAVGGGSAREAGRADGAPLRWLGRPATGPRTAIAARAQR
+YWLRDPRYAAGLVMIPVLAAVLWFASTAGGDAGPGLGMLTMLGPVSAWALAYSISADIAY
+DHTAFHLHVVSGVRGADDRWGRVMGLAGWGVPALVVLTVATTAAADRWDLLPALLGLTLG
+LFGVTAAMSAFVSARFVYPVPKPGESPFKTPQGATMRIMLVQGAAMLVVVPLAVPVVVPF
+VVALVTQSAVWGWATLAVGLAWGAVALWLGVRMGAAWYDRAQAETYQAVAAF
+>1_777
+MALTLVRLRWTLTLNQWRRSPFTLVVSVLGALYVLGMAAVAVTLLVTGLPALPDEARGAT
+TVLVAAVVVLAWLVIPPFVTGVDATLDPHSFVLFPVPARTLIAGLVLSAFTTPAGLATLA
+VLVGLGASWWDRPAALAAGLAGGALTAVTAVAIGSGLAGLLAAYASRRRVRDVVSVLLFI
+PLMLGGVALSRAVASFEDFLAIAPQVARGAAWTPFGAGPAAAWAAAEGRGAAAALHLAVA
+AAWCLAALALWHLAVRRTVEPVAVGGGGSRRVGAGADPTPLRWLGRPATGPRTAIAARAQ
+RYWLADPRYAAGLIIIPLMAVVLWFTGGLASGGGLGPGLLLILGPMTAWSLAYSISADIA
+YDHTAFHLHVVSGVRGVDDRWGRVLGLAGWGVPMILLVTTATVAAAGDWSLLAPMLGLAL
+GLFGTTAGLSAFLSARFVYPVPKPGDSPFKTPQGAAMRTMLVQGASMLVSLALAVPFLVP
+FIVRLATGAAVWGWVTVALGFAWGAVALWLGVRLGARWYDRAQAETYQAVAAF
+>2_1969
+MALTLTRLRWALTLNGWRRSTLTLVLSVLGALYFFGMAAMAVAALVVGLPEAELPVRGAV
+TVLVAAVVVLLWTILPPLVTGVDATLDPSSFVLFPVPARTLVAGLLLSTFTTPIGALTLL
+GLLGVAASWWDTPAALAAAAVGAVLSAVTAVCLGYGVTGLMSSFTGRRRVREAISLLVLI
+PLMLGGVALSRVMQSIDDLLWLGPVLANAAVWTPFGAGLGAGWAAAEGRWGLAGLRLLVA
+LAWAVAAAALWMLAIRRTVEPAAVGSTDSAAPRGDRATDLRWLGRPATSARTAIAARAQL
+YWFKDPRYMASLVTVPLMFVLLWFMGTSGPEGATAILLAAGPVTAWALGYSLSADIAYDH
+TAFHLHVLAGVKGIDDRLGRVMGLLGWALPVVAGVTLATVAMHGDWSVLPAILGVSLGVL
+GACLGLSALVSARWVYPVPKPGDSPLKTPQGAAMRIMLVQGTSLLVTLVLLVPMAVPFVV
+LLVTGAAVWSWVTLAVGLAWGALALWLGVRAGAAWYDRAQAETLQAVQSW
+>3_517
+MALTLVRLRWTLTLNQWRRSPFTLVMSVLGALYVLGMAAVAVTLLVTGLPALPDEARGAT
+TVLAAAVVVLAWLVIPPFVTGVDATLDPHSFVLFPVPARTLIAGLVLSAFTTPVGLATLA
+VLVGLGASWWDRPAALAAGLAGGALTAVTAVAIGSGLAGLLAAYASRRRVRDVVSVLLFI
+PLMLGGVALSQAIASFEDFLAIAPQVARGAAWTPFGAGPAAAWAAAEGRGAAVALHLAVA
+AAWCLAALALWHLAVRRTVEPVAVGGGRSRRVAAGADPMPLRWLGRRATGPRTAIAARAQ
+RYWLADPRYAAGLIIIPLMAVLLWFTGGMAAEGGPGLGLLLILGPITAWSLAYSISADIA
+YDHTAFHLQVVSGVRGVDDRWGRVLGLAGWGVPMILLVTTATVAAAGDWSLLAPMLGLAL
+GLFGTTAGLSAFVSARFVYPVPKPGDSPFATPQGAAMRTMLVQGAAMLVSLALAVPFLVP
+FVVRLVTGAAVWGWVTVALGLAWGAVALWLGVRLGARWYDRAQAETYQAVAAF
+>4_744
+MALTLVRLRWTLTLNQWRRSPFTLVMSVLGALYVLGMAAVAVTLLVTGLPALPDEARGAT
+TVLAAAVVVLAWLVIPPFVTGVDATLDPHSFVLFPVPARTLIAGLVLSAFTTPVGLATLA
+VLVGLGASWWDRPAALAVGLVGGALTAVTAVAIGSGLAGLLAAYASRRRVRDVVSVLLFI
+PLMLGGLALSRAIASFEDFLAIAPQIARGAAWTPFGAGPAAAWAVAEGRGAAVALHLAVA
+AAWCLAALALWHLAVRRTVEPVAVGGGRSRRVAAGADPTPLRWLGRPATGPRTAIAARAQ
+RYWLADPRYAAGLIIIPLMAVLLWFTGGMAGEGGPGLGLLLVLGPITAWSLAYSISADIA
+YDHTAFHLHVVSGVRGVDDRWGRVLGLAGWGVPMILLVTTATVAAAGDWSLLAPMLGLAL
+GLFGTTAGLSAFVSARFVYPVPKPGDSPFATPQGAAMRTMLVQGAAMLVSLALAVPFLVP
+FVVRLVTGAAVWGWITVALGLAWGAVALWLGVRLGARWYDRAQAETYQAVAAF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001461.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001461.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c06bce947561c0dd8fa600371886cb5f42ccb356
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001461.fa
@@ -0,0 +1,25 @@
+>0_2090
+MISNGLILAAGANPLIPNPWEILVVVVGFALLMFIVIKFIVPTLEKSYQDRVEAIEGGLA
+KAEKAQAEANAMMADYESQLADARTEANRIREDARTEAAEIVAEARERATAESTRISEQA
+QAQIAAERQQAASQLKGEVGTLATTLASKIVGESLEDDARSQRVVDRFLADLDRHQSAGV
+AE
+>1_765
+MISNGLILAAAEGANPLIPNPWEILVVVVGFALLMFIVIKFIVPTLEKSYQDRVEAIEGG
+LAKAEKAQAEANAMMADYESQLADARTEANRIREDARTEAAEIVAEARERATAEARRISE
+QAQAQIAAERQQAAAQLKGEVGSLATTLAGKIVGESLEDDARSQRVVDRFLADLDRHQSA
+GVAE
+>2_1982
+MISNGLILASAEGANPLVPNPWEILVTTVGFAVLMFIVVKFVVPALEKSYTDRVEAIEGG
+LEKAEKAQAEANKMMADYEGQLADARQEANRIREEARTEGAQIVAEARERAAAEAARITE
+QAQTQIAAERTQAAAQLKGEVGTLATTLASKIVGESLDDDARSQRVVDRFLADLDRHQSA
+GVSE
+>3_505
+MISNGLILAAAEGANPLIPNPWEILVVVVGFALLMFIVIKFIVPTLEKSYQDRVEAIEGG
+LAKAEKAQAEANAMMADYESQLADARTEANRIREDARTEAAEIVAEARERATAEARRISE
+QAQAQIAAERQQAAAQLKGEVGSLATTLAGKIVGESLEDDARSQRVVDRFLADLDRHQSA
+GVAE
+>4_732
+MISNGLILAAAEGANPLIPNPWEILVVVVGFALLMFIVIKFIVPTLEKSYQDRVEAIEGG
+LAKAEKAQAEANAMMADYESQLADARTEANRIREDARTEAAEIVAEARERATAEATRISE
+QAQAQIAAERQQAAAQLKGEVGSLATTLAGKIVGESLEDDARSQRVVDRFLADLDRHQSA
+GVAE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001462.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001462.fa
new file mode 100644
index 0000000000000000000000000000000000000000..97a628e4c6be8eb947a174a80c82928a872c5135
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001462.fa
@@ -0,0 +1,15 @@
+>0_2091
+MELHGSLNMIGYGLAAIGSAIGVGLIFAAYINGVARQPEAQRILQPIALLGFALAEALAI
+LGLVFAFVIGA
+>1_764
+MELHGSLNMIGYGLAAIGSAIGVGLIFAAYINGVARQPEAQRILQPIALLGFALAEALAI
+LGLVFAFVIGA
+>2_1983
+MEISGSLNMIGYGLAAIGSAIGVGLIFAAYINGVARQPEAQRILQPIALLGFALAEALAI
+LGLVFAFVIN
+>3_504
+MELHGSLNMIGYGLAAIGSAIGVGLIFAAYINGVARQPEAQRILQPIALLGFALAEALAI
+LGLVFAFVIGA
+>4_731
+MELHGSLNMIGYGLAAIGSAIGVGLIFAAYINGVARQPEAQRILQPIALLGFALAEALAI
+LGLVFAFVIGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001465.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001465.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4b6a57089592dce957c2dfea62893bfe4f8cdab3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001465.fa
@@ -0,0 +1,40 @@
+>0_2094
+MRAYLVLVVVTALACGALTPLMRRIGLRARVFTPVRQRDMHRRPIPKLGGVAMAAAVLVG
+LAVGGTVPFLQGIYADDAAMVGLLVAVAVVFVVGIADDLWDLRWWVKMAGQVCAGLAVAL
+GGIRIEAMPVGWIPVGSEAMQIALTVFAVVLTMNALNFVDGLDGLAAGVALIGGSAFFVY
+SYLLTRTINQFDYANLATLLMALLVGACLGFLPFNRFPARIFMGEVGAMLLGLLMAAAAV
+AVTADVKALDGMRFRNVPAYMPILLPIAVLALPLLDLALAVVRRTARGASPFSADRGHLH
+HKLVDGGYTHAQAVWLLWLWAFLVAWGAVSLNFVDDMIVLPVLGLALLGAGYLTLRTPVR
+RRRAGAPAAGPALDPEEGA
+>1_761
+MRAYLVLVMVTAVACGALTPLMRRLGLRARVFTPLRQRDVHRHPVPKLGGVAMAAAVLVG
+FAVGGVVPFLQGIYADDAAMRGLLVAVAVVLVVGIADDMWDLRWWVKMAGQVLAGLAVAL
+GGIRIEAMPVGWIPVGNETTQVILTVFAVVLTMNAINFVDGLDGLAAGVALIGGSAFFVY
+SYLLTRTINQFDYANLATLLMALLVGACVGFLPWNLAPARIFMGEVGAMLIGLLMAAAAV
+AVTADVNALDGMRFRNVPAYMPILLPVAVLALPLADLALAVLRRTAKGTSPFSADRGHLH
+HKLVDGGYTQAQAVGLLWLWAFLVAWGAVSLNFVDHMVVLPVLAVALAGAGYLTLHPIVE
+RRRADRNDAAAHPDERGDA
+>2_1986
+MRAYLLVAAVTALTCLALTPWVRRVGVRARAYTPHRDRDVHRAPVPKLGGVAMVAAVLAG
+LAVAGTVPFLGGIFTDASAMRGLLAALGIILVLGVVDDLVDLRWWAKLGGQSLAALAVAL
+GGIRIAALPVGWIHVGSEAVQVALTVFVVVLTMNAINFIDGLDGLAAGVALIGGSAFFVY
+SYLLTRTIDQFDYSNLATLLMALLIGACAGFLPYNRHPARIFMGESGALLLGLLLSTAAV
+AVTADLDALEGFRFRNVPAYMPVLLPIAVLALPLADLTISVIRRAAHGESPFGADRGHLH
+HRLVDGGFTHAQAVRVLWLWSFIVAWGVLSLNFADDAVVLLLAAAGLAVATWLTVHPLRA
+RAARPASRPDAQPKDQP
+>3_501
+MRAYLVLVMVTAVACGALTPLMRRLGLRARVFTPLRQRDVHRHPVPKLGGVAMAAAVLVG
+FAVGGVVPFLQGIYADDAAMRGLLVAVAVVLVVGIADDMWDLRWWVKMAGQVLAGLAVAL
+GGIRIEAMPVGWIPVGNETTQVILTVFAVVLTMNAINFVDGLDGLAAGVALIGGSAFFVY
+SYLLTRTINQFDYANLATLLMALLVGACVGFLPWNLAPARIFMGEVGAMLIGLLMAAAAV
+AVTADVNALDGMRFRNVPAYMPILLPVAVLALPLADLALAVLRRTAKGTSPFSADRGHLH
+HKLVDGGYTQAQAVGLLWLWAFLVAWGAVSLNFVDHMVVLPVLAVALAGAGYLTLHPIVE
+RRRADRNDAAAHPDERGDA
+>4_728
+MRAYLVLVVVTAVACGALTPLMRRLGLRARVFTPLRQRDVHRHPVPKLGGVAMAAAVLVG
+FAVGGVVPFLQGIYADDAAMRGLLVAVAVVLVVGIADDMWDLRWWVKMAGQVLAGLAVAL
+GGIRIEAMPVGWIPVGNETTQVILTVFAVVLTMNAINFVDGLDGLAAGVALIGGSAFFVY
+SYLLTRTINQFDYANLATLLMALLVGACVGFLPWNLAPARIFMGEVGAMLIGLLMAAAAV
+AVTADVNALDGMRFRNVPAYMPILLPVAVLALPLADLALAVLRRTAKGTSPFSADRGHLH
+HKLVDGGYTQAQAVALLWLWAFLVAWGAVSLNFVDPMIVLPVLAVALAGAGYLTLHPIVE
+RRRAVRNDAAAHPDERGDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001470.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001470.fa
new file mode 100644
index 0000000000000000000000000000000000000000..709ee3a257571062981d09fd370d266e0b3f1836
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001470.fa
@@ -0,0 +1,40 @@
+>0_2099
+MAHQWRGVVREYADRLPVTEDTRVITLGEGGTPLIHAPHLSELVQGTVHVKFEGMNPTGS
+FKDRGMTMAITAAVDQGAKAVVCASTGNTSASAAAYAAQAGLTCAVLVPEGKISMGKMSQ
+AVAHGAEILQVQGNFDDCLEVARKLAENYPVFLVNSVNPARIEGQKTGAFEVVDALGDAP
+DYHLLPVGNAGNITAYWKGYREYAAPYVNPHEGASDEELPAVSTKTPVMWGFQAAGAAPI
+VLGHPVTEPDTIATAIRIGNPASWEQAEAARDGSGGMIDSVTDEEILAAHRWLSAKEGVF
+VEPASAAGVAGLIKHHAAGNVPAGKSWVITVTGHGLKDPQWALRDADGEDVTPRTVPFDV
+VTVAQALGLA
+>1_755
+MAHQWRGVVREYADRLPVTEDTRVITLGEGGTPLIHAPHLSELVQGTVHVKFEGMNPTGS
+FKDRGMTMAITAAVADGAKAVVCASTGNTSASAAAYAAQAGITCAVLVPEGKISMGKMSQ
+AVAHGAEILQVQGNFDDCLEVARKLAENYPVFLVNSVNPARIEGQKTGAFEVVDTLGDAP
+DYHLLPVGNAGNITAYWKGYREYAAPYVNPHEGASDAELPAVATKTPVMWGFQAAGAAPI
+VQGHPVTDPDTIATAIRIGNPASWEQAEAARDESGGMIDSVTDEEILEAHRWLSAKEGVF
+VEPASAAGVAGLLKHHAAGNVPAGKSWVITVTGHGLKDPQWALRGADGADVTPRSVPFDV
+VTVAQALGLS
+>2_1992
+MAHVWRGVIREYAGRLPVTEDTRVVSLGEGGTPLIRAPHLSELVEGEVYVKFEGMNPTGS
+FKDRGMTMAITAAVENGAKAVVCASTGNTSASAAAFAAQAGLTCAVLVPEGKISMGKMSQ
+AVAHGAEILQVQGNFDNCLDIARKLSENYPVFLVNSVNPARIEGQKTAAFEVVDLLGDAP
+DYHLLPVGNAGNITAYWKGYQEYSRPYVNPHPGTSDEELPAVATKTPVMWGFQAAGAAPL
+VLGHPVTEPETIATAIRIGNPASWDQATAARDASGGMIDSVTDEEILAAHRWLSSKEGVF
+VEPASAAGVAGLIKHHAAGNVPAGKTWVITVTGHGLKDPQWALKGADGDDVTPRSVPFDV
+VTVAEALGLT
+>3_495
+MAHQWRGVVREYADRLPVTEDTRVITLGEGGTPLIHAPHLSELVQGTVHVKFEGMNPTGS
+FKDRGMTMAITAAVADGAKAVVCASTGNTSASAAAYAAQAGITCAVLVPEGKISMGKMSQ
+AVAHGAEILQVQGNFDDCLEVARKLAENYPVFLVNSVNPARIEGQKTGAFEVVDTLGDAP
+DYHLLPVGNAGNITAYWKGYREYAAPYVNPHEGASDAELPAVATKTPVMWGFQAAGAAPI
+VQGHPVTDPDTIATAIRIGNPASWEQAEAARDESGGMIDSVTDEEILEAHRWLSAKEGVF
+VEPASAAGVAGLLKHHAAGNVPAGKSWVITVTGHGLKDPQWALRGADGADVTPRSVPFDV
+VTVAQALGLS
+>4_722
+MAHQWRGVVREYADRLPVTEDTRVITLGEGGTPLIHAPHLSELVQGTVHVKFEGMNPTGS
+FKDRGMTMAITAAVADGAKAVVCASTGNTSASAAAYAAQAGITCAVLVPEGKISMGKMSQ
+AVAHGAEILQVQGNFDDCLEVARKLAENYPVFLVNSVNPARIEGQKTGAFEVVDTLGDAP
+DYHLLPVGNAGNITAYWKGYREYAAPYVNPHEGASDAELPAVATKTPVMWGFQAAGAAPI
+VQGHPVTDPDTIATAIRIGNPASWEQAEAARDESGGMIDSVTDEEILEAHRWLSAKEGVF
+VEPASAAGVAGLLKHHAAGNVPAGKSWVITVTGHGLKDPQWALRGADGADVTPRSVPFDV
+VTVAQALGLS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001472.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001472.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fe9b6a694531866f743f9db41210240fd33c7f5d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001472.fa
@@ -0,0 +1,50 @@
+>0_2101
+MTTPQPAPASPLAPAWLPAPGDPDALAPGLWAAGVDRAADGELTVQGLRASALAVEFGTP
+LLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVDTAS
+GGELAIALAAGVDPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELEHLAALAAEAGH
+RAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPATTDRDGNVAGRSPAAVAVAAALAA
+ESIDLLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAYTAV
+DEPRPAAEIADALADDVQKTVERLGLACPRISLEPGRAISGPAGLTLYTVGVTKTVDADT
+PDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSAARTSDAQAVLTRVVGKHCESGDVLV
+RDVYLPEDLGRGDLLAVPATGAYTHVMASNYNALTRPAVVAVAGGRARVIIRRETQEDLF
+AREADPRLGR
+>1_753
+MRTPQPAPASPLAPAWLPAPGDPDALVPGLWAAGVDRAADGELTVQGLRASALAAEFGTP
+LLVVDEDDFRARARAFRKGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVDTAS
+GGELAIALAAGIDPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELTHLAALAAEAGR
+RAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTDRDGNVAGRSPAAVAVAAALAA
+ESIELLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAYTAV
+DEPRPAAEIADALADDVQKTVERLGLACPRISLEPGRAISGPAGLTLYTVGVTKTVDVDA
+PDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSARRTSEAEPVLSRVVGKHCESGDILV
+RDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPAVVAVSGGQARVIIRRETQEDLF
+ARETDPRLAR
+>2_1994
+MNAGSVNLEETVTETAPQSAHPLAPAWLPAPADPDALAPLVWSSGVARDAAGELAVQGVP
+ASVLAERFGTPVLVLDEDDFRARARAFREGFDAAFESLCGGADVYFAGKSMLTLSTARWA
+AEEGLRVDTASGGELAIALRAGVLPEHIGLHGNNKSAAELATALDAGVGRIIVDSVDELE
+FLAALAAERGQIAPVMLRVTPGVHAHTHDFIATAHEDQKFGLSLTPSATGRDGNEAGVAP
+AAVAVRTALQADSIRLLGLHCHIGSQIFEADGFGLAAERVLGFLAEVKDEHGVELPELDL
+GGGHGIAYTAVDEPRPAAEIADALADDVQKAVERLGLTCPRISIEPGRAISGPAGLTLYS
+VGVTKTVDVDAPDDGTASRRYVAVDGGMSDNPRPVLYDADYTAALASRTSDAAPALSRVV
+GKHCESGDILVRDVWLPEDVARGDLLAVPATGAYTHSMSSNYNALLRPAVVAVRDGEARE
+IVRRETLDDLLRREVDPQNPA
+>3_493
+MRTPQPAPASPLAPAWLPAPGDPDALVPGLWAAGVDRAADGELTVQGLRASALAAEFGTP
+LLVVDEDDFRARARAFRKGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVDTAS
+GGELAIALAAGIDPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELTHLAALAAEAGR
+RAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTDRDGNVAGRSPAAVAVAAALAA
+ESIELLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAYTAV
+DEPRPAAEIADALADDVQKTVERLGLACPRISLEPGRAISGPAGLTLYTVGVTKTVDVDA
+PDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSARRTSEAEPVLSRVVGKHCESGDILV
+RDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPAVVAVSDGQARVIIRRETQEDLF
+AREADPRLAR
+>4_720
+MTTPQPAPASPLAPAWLPAPGDPDALVPGLWAAGVDRAADGELTVQGLRASALAAEFGTP
+LLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVDTAS
+GGELAIALAAGVDPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELTHLAALAAEAGR
+RAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASSDRDGNVAGRSPAAVAVAAALAA
+ESIDLLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAYTAV
+DEPRPAAEIADALADDVQKTVERLGLRCPRVSLEPGRAISGPAGLTLYTVGVTKTVDADA
+PDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSARRTSEAEPVLSRVVGKHCESGDILV
+RDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPAVVAVSGGQARVIIRRETQEDLF
+AREADPRLAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001476.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001476.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ed639bff2c00302309250c5e5e05599133cccca3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001476.fa
@@ -0,0 +1,15 @@
+>0_2105
+MSTLTLTLNGEPAELAAATVRDVVAHVTGRAIGDDGAAADARRLGVAVAVGGEVVPRSAW
+ATRELTAGDEVDVVTAVQGG
+>1_749
+MSTLTLTLNGEPAELAVATVRDVVAHVTGRAIGEDGAAADGRRLGVAVAVGGEVVPRSAW
+ATRELAAGDEVDVVTAVQGG
+>2_1999
+MSALPLTLNGEPAELDGPTVRDVVEHVTGRTVRDDGAAADGRRLGVAVAVDGEVVPRSAW
+AARTLAGGEAVEVVTAVQGG
+>3_489
+MSTLTLTLNGEPAELAVATVRDVVAHVTGRAIGDDGAAADGRRLGVAVAVGGEVVPRSAW
+ATRALAAGDEVDVVTAVQGG
+>4_716
+MSTLPLTLNGEPAELAVATVRDVVAHVTGRAIGDDGAAADGRRLGVAVAVGGEVVPRSAW
+ATRALAAGDEVDVVTAVQGG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001477.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001477.fa
new file mode 100644
index 0000000000000000000000000000000000000000..732be3c382ff208978ce6beee401ab47200f5f7f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001477.fa
@@ -0,0 +1,40 @@
+>0_2106
+MHVAVVGAGIIGLTAAVRLRAAGHAVTLIAPELDAAGRPHAVAGATHAAAGMLAPLAETQ
+FSQDDLAPLLQAGWEAYPALVGLLAVFTDVETGFLAQGAWIVAADPSDARAWDHVLEHAS
+ILGRRVEPVSVRALRRAEPALTPGLAAAFDAPDDHQVDPRRLAAACVAALRAETGPDGGP
+LPAGAGPAARFVAGRVTAADPEGEGVRLTLADGGVLTADGAVLAAGLGHRGIGGAATAVE
+VPLRPVHGDVLRLRVRPEQLLPGESHLITRTVRGLVHGRQVYLVPRADGTLVVGASARED
+GLAGTCAGAVLDLLADAAAILPAVRECELVEITTAARPGTPDDAPRVLTVPEAPGAVVAT
+GFHRHGILLAPWAAGRILELLHARLKEIA
+>1_748
+MHVAVVGAGIIGLTAAVRLRAAGHAVTLIAPELDAAGRPHAVAGATHAAAGMLAPLAETQ
+FSQDDLAPLLQAGWEAYPALVDLLAAFTDVETGFLAQGAWIVAADPSDARAWDHVLEHAS
+ILGRRVEPVSVRALRRAEPALAPGLAAGFDAPDDHQVDPRRLAAACVAALRAETGPDGGP
+LPVGAGPAARFVAGRVTAAGPEGEGVRLTLADGGVLTADGAVLAAGLGHRGIGGAATAVE
+VPLRPVHGDVLRLRVRPEQLLPGESHLITRTVRGLVHGRQVYLVPRADGTLVVGASARED
+GLAGTSAGAVLDLLADAAAILPAVRECELVEITTAARPGTPDDAPRVLTVPEAPGAVVAT
+GFHRHGILLAPWAAGRILELLHARLKEIA
+>2_2000
+MHVAVVGAGIIGLTAAVRLRAAGHAVTLIAPELDTAGRPHAVAGATHAAAGMLAPLAETQ
+FSQDALAPLLHAGWKGWPLLVDLLAGFSDVGTGFRTEGSWIVAADPSDVLAWEHVLAHAS
+ALGRRVEPVAVRALRRAEPALAPGLAAGFDAPDDHQVDPRRAAAACLAALVAEAGPDGGP
+LPAGAGPAARLVSGTVTSADPVGSGVGLTLADGGILTADGAVLAAGLGHRGIGGAATAEV
+PLRPVHGDVLRLRVRPEQLLPGEDHLITRTVRGLVHGRQVYLVPRADGTLVVGASAREDG
+LAGTSAGSVLDLLADAAAILPAVRECELAEVTTAARPGTPDDAPRVEVVPGAPVVVATGF
+HRHGILLAPWAAGRVLDLLTALPKETA
+>3_488
+MHVAVVGAGIIGLTAAVRLRAAGHAVTLIAPELDAAGRPHAVAGATHAAAGMLAPLAETQ
+FSQDDLAPLLQAGWEAYPALVDLLAAFTDVETGFLAQGAWIVAADPSDARAWDHVLEHAS
+ILGRRVEPVSVRALRRAEPALAPGLAAGFDAPDDHQVDPRRLAAACVAALRAETGPDGGP
+LPVGAGPAARFVAGRVTAAGPEGEGVRLTLADGGVLTADGAVLAAGLGHRGIGGAATAVE
+VPLRPVHGDVLRLRVRPEQLLPGESHLITRTVRGLVHGRQVYLVPRADGTLVVGASARED
+GLAGTSAGAVLDLLADAAAILPAVRECELVEITTAARPGTPDDAPRVLAVPEAPGAVVAT
+GFHRHGILLAPWAAGRILELLHARLKEIA
+>4_715
+MHVAVVGAGIIGLTAAVRLRAAGHAVTLIAPELDTAGRPHAVAGATHAAAGMLAPLAETQ
+FSQDDLAPLLQAGWEAYPALVDLLAAFTDVETGFLAQGAWIVAADPSDARAWDHVLEHAS
+ILGRRVEPVSVRALRRAEPALTPGLAAGFDAPDDHQVDPRRLAAACVAALRAETGPDGGP
+LPTGAGPAARFVAGRVTAADPEGEGVRLTLADGGVLTADGAVLAAGLGHRGIGGAATAVE
+VPLRPVHGDVLRLRVRPEQLLPGESHLITRTVRGLVHGRQVYLVPRADGTLVVGASARED
+GLAGTSAGAVLDLLADAAAILPAVRECELVEITTAARPGTPDDAPRVLAVPEAPGAVVAT
+GFHRHGILLAPWAAGRILELLHAHLKEIA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001478.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001478.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fc43a08d5065af59f45a0c22f7dea82e343a0157
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001478.fa
@@ -0,0 +1,30 @@
+>0_2107
+MHSPDPLLMAAAGRDDGDTGPGTGRRARLAASRLYVCTDLQRFLRPDGTLDTVAFADFCA
+AAFRGGVDLIQVRDKAVDVAVELAAFAVLVPLARAHEALSAANDRADVAALAGVDVFHTG
+QTDLTTVQCRALLGPDVVLGRSCHTEAQVRAARAEDGLDYFCTGPVWATPTKPGRAAVGL
+ELPSHAARLDAEDPAGARPWFAIGGVDADRLTEVRAAGADRIVVVRAVTQAEDPEAAART
+LRAGLPG
+>1_747
+MHSPDPLLMTAAGRDDGGTGPGARRRARLAASRLYVCTDLQRFLRPDGTLDTAAFADFCA
+AAFRGGVDVIQVRDKAVDVAVELAAFATLVPLAREHGALSAANDRADVAALAGVDVFHTG
+QTDLTTAQCRALLGPDVVLGRSCHTEAQVRGARAEDGLDYFCTGPVWATPTKPGRAAVGL
+ELPTLAARLDAEDPAGARPWFAIGGVDADRLPEVRAAGAERIVVVRAVTQAEDPEAAART
+LRAGLPG
+>2_2001
+MHSPDPLLMTAAGRDDGDTGPGAGRRARLAASRLYVCTDLQRFLRPDGTLDTAAFGGFCA
+AAFRGGVDLIQVRDKAVDVAVELAAFAVLIPLAREHGALSAANDRADVAALAGVDVFHTG
+QTDLTTAQCRALLGPNVVLGRSCHTPDHVRAARAEDGLDYFCTGPVWATPTKPGRAAVGL
+GLPTLAARLDAEDPAGARPWFAIGGVDAERLPEVRAAGAGRIVVVRAVTQAADPEAAARE
+LRAGLPA
+>3_487
+MHSPDPLLMTAAGRDDGGTGPGARRRARLAASRLYVCTDLQRFLRPDGTLDTAAFADFCA
+AAFRGGVDVIQVRDKAVDVAVELAAFATLVPLAREHGALSAANDRADVAALAGVDVFHTG
+QTDLTTAQCRALLGPDVVLGRSCHTEAQVRGARAEDGLDYFCTGPVWATPTKPGRAAVGL
+ELPTLAARLDAEDPAGARPWFAIGGVDADRLPEVRAAGAERIVVVRAVTQAEDPEAAART
+LRAGLPG
+>4_714
+MHSPDPLLMAAAGRDDGGTGPGAGRRARLAASRLYVCTGLQRFLRPDGTLDTAAFADFCA
+AAFRGGVDVIQVRDKAVDVALELAAFAVLVPLAREHGALSAANDRADVAALAGVDVFHTG
+QTDLTTAQCRALLGPNVVLGRSCHTEAQVRAARAEDGLDYFCTGPVWATPTKPGRAAVGL
+GLPSLAARLDAEDPAGARPWFAIGGVDADRLPEVRTAGAERIVVVRAVTQAEDPEAAART
+LRAGLPG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001485.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001485.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2e6dd283a3cbd92213465a1eafb57a9beaa752ec
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001485.fa
@@ -0,0 +1,20 @@
+>0_2115
+MASVFSRIIAGELPARFVWQDETCVAFLSTGPLNPGHALVVPREEVDAWVDADPALVMHL
+MTVAQQLGKAQVRAFSAQRAGLMVAGYEILHLHVHVWPSNSLADFDLNRVDNSPDPAEMD
+DAAARLRAALRELGHGEVVPQD
+>1_738
+MATVFSRIIAGELPARFVWQDQTCVAFLSAAPLQPGHALVVPRAEVDEWVEVDPALVTHL
+TTVAQQIGKAQVAAFSARRAGLMIAGYEIPHLHVHVWPSTSLADFDLARVDNAPDPADLD
+DAAARLRAALRDLGHGEVVPQD
+>2_2010
+MATVFSRIIAGELPARFVWQDEQCVAFLSLGPLAQGHTLVVPREEVDQWVDADPDLLAHL
+TRVAQAIGRVQVRAFGAQRAGLMVAGYEIPHLHVHVWPSNSMNDYDMARVDNAPEPESLD
+EAAAAIRAGLREDGHGDVVPQD
+>3_477
+MATVFSRIIAGELPARFVWQDQTCVAFLSAAPLQPGHALVVPRAEVDEWVEVDPALVTHL
+TTVAQQIGKAQVAAFSARRAGLMIAGYEIPHLHVHVWPSTSLADFDLARVDNAPDPADLD
+DAAARLRAALRDLGHGEVVPQD
+>4_702
+MATVFSRIVAGELPARFVWQDQTCVAFLSAAPLQPGHTLVVPRAEVDEWVEVDPALVTHL
+TTVAQQIGKAQVAAFSARRAGLMIAGYEIPHLHVHVWPSTSLADFDLARVDNAPDPADLD
+DAAARLRAALRDLGHGEVVPQD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001489.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001489.fa
new file mode 100644
index 0000000000000000000000000000000000000000..02590bb5dc6b2b77371541dd802c8761e1675d7d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001489.fa
@@ -0,0 +1,35 @@
+>0_2121
+MHRTPRRRAAAALTLASALALAGCGADSGGDGQAGSGEPAAVATTTQLGSVLGDVARCAG
+ATTATVMGPGDDPHDFAPSSQQVAQMARAGLVFANGFGLEAGMASALENAAQDGAQVLEV
+APRLDPLPFGAGEGAADGHAGETADEHAAHAEEGSAGAHDGHDHGSQDPHVWMDVARMAR
+AAEVMGDALAEHTGEDRFADCGRQVRGELEATDAEVREILAAVPEDRRRLIADHDAYGYF
+AAAYGFEVAGVVVPGGSTDGEPSSQRIAELTQAVAEAGADALVTSAGGGAPTVETIAADG
+GGSTPVVELYEGGVGPADGEPAGYAEAMLHNARVLADALGE
+>1_733
+MLRRRRLPALTGALAALTLSLAACGGTSGDSAGAQAAGASADSGSGSAAGAPVAVATTTQ
+LGSVLDRVVACADARSATVMGPGDDPHDFSASSAQVKDMVSSGLVFSNGLGLEGGMESAL
+ANAEADGATVVEVAPQLDPLPFGGHDHAEEGAGHEGHDHGSEDPHVWMDVARMARAAELM
+GDTLAQERGDERFAECGATVRGELEQTDAQVREILAGVPEDRRTLVTDHDAYGYFSDAYD
+FTVSGVVVPGGSTDGEPSSQEIAELARSIRDGGADAVITSVGARNSLVDTVAEEAGNLPV
+IEVYESGVGPKDTPEADYAEAMLANARTLADALEG
+>2_2015
+MSRSSPTPRLAAPAVVAALGVALAGCSVADSSSPSAAEEGAVTASSSAAGPVVAVATTTQ
+LASVADRVARCGGGSVVSVMGPGDDPHDVAASSDQVAQMVHSGLVFTNGLGLEGGMDSAL
+DNARQDGAVVVEVAPRLDPLPFGEHDADHAGHEGADAHAGHEHGSQDPHVWMDVARMAAA
+ARVVGDELAAETGEQKYAECGATVEGELEETDRQVREILAAVPQERRTLVTDHDAYGYFS
+AAYGFTIEGVVVPGGSTDAEPSSRELAALTQQVKDHGAAALLTSTGTPNGLVETVAREAG
+GLPVVQLYEGGVGPVGTPEADYAQAMLHNARTLADALKG
+>3_472
+MLRRRRLPALTGALTALTLSLAACGGTSGDSAGEQAAGASAAAGSGSAAGAPVAVATTTQ
+LGSVLDRVVACADARSVTVMGPGDDPHDFSASSAQVKDMVSSGLVFSNGLGLEGGMESAL
+ANAEADGATVVEVAPQLDPLPFGGHDHAEEGAGHEGHDHGSEDPHVWMDVARMARAAELM
+GDTLAQERGDERFAECGATVRGELEQTDTQVREILAGVPEDRRTLVTDHDAYGYFSEAYD
+FTVSGVVVPGGSTDGEPSSQEIAELARSIRDGGADAVITSVGARNSLVDTVAEEAGDLPV
+IEVYEGGVGPKDTPEADYAEAMLLNARTLADALEG
+>4_697
+MLRRRRLPALTGALTALTLSLAACGGTSGDSSGAQAAGASADAGSGSAVGEPVAVATTTQ
+LGSVLDRVVACAGARSATVMGPGDDPHDFSASSAQVKDMVSSGLVFSNGLGLEGGMESAL
+ANAEADGATVVEVAPQLDPLPFGGHDHAEEGAGHEGHDHGSEDPHVWMDVARMARAAELM
+GDTLAQERGDEQFAECGATVRGELEQTDTQVREILAGVPEDRRTLVTDHDAYGYFSEAYD
+FTVSGVVVPGGSTDGEPSSQELAELARSIRDGGADAVITSVGARNSLVDTVAEEAGDLPV
+IEVYEGGVGPKDTPEADYAEAMLVNARTLADALEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001494.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001494.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6df24526d63e8c8eff20cd67812bdc05e7336962
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001494.fa
@@ -0,0 +1,25 @@
+>0_2126
+MNDRRIRIAAVGDHLLAGAGDARAIGWWGRVLARTQAPGVELENYVLAVPHETTEDLNER
+WWGEASRRYSEDTENRLVVALSDADLDLEASSTARSRLNLANVLDTASQRGIPVLVVGPT
+PTLDEERNARLAELNAAYLDVADRRSHVYVDTFTPLQGHEQWRADLAAGEGRPGQAGHGL
+IAWLVLHRGWYQWLGLPEPTA
+>1_728
+MHNRRIRIAAVGDQLLAGAGDARAIGWWGRVLARTQAPDVELENYVLAVPHETTEDLNER
+WWGEASRRFSEETENRLVVALSDADLDLEATSTARSRLNLANVLDTASQRNIPVLVVGPT
+PTLDEQRNARLAELNAAYLDVADRRNHVYVDTFTPLVGHEQWRSDLASGQGRPGQAGHGL
+IAWLVLHRGWYQWLGLPEPTA
+>2_2020
+MQNRRIRIAAVGDHILAGAGDPRSIGWWGRVLARTAAPEVTLENYVLAVPHETTEQLNER
+WWGEASRRFSESAENRLVVALSDADLDLEASSSARSRLNLANVLDTASQRGITALVVGPV
+PTLDEARNDRLADLNTAYQDVAARRGHLYVDAFTPLRTHEQWRADLAAGDGVPGQAGHGL
+IAWLVLHRGWYQWLGVPEPTA
+>3_467
+MHNRRIRIAAVGDHLLAGAGDARAIGWWGRVLARTQAPDVELENYVLAVPHETTEDLNER
+WWGEASRRFSEETENRLVVALSDADLDLEATSTARSRLNLANVLDTASQRNIPVLVVGPT
+PTLDEQRNARLAELNAAYLDVADRRNHVYVDTFTPLVGHEQWRSDLASGQGRPGQAGHGL
+IAWLVLHRGWYQWLGLPEPTA
+>4_692
+MHNRRIRIAAVGDHLLAGAGDARAIGWWGRVLARTQAPDVELENYVLAVPHETTEDLNER
+WWGEASRRFSEETENRLVVALSDADLDLEATSTARSRLNLANVLDTASQRNIPVLVVGPT
+PTLDEQRNARLAELNAAYLDVADRRNHVYVDTFTPLVGHEQWRSDLASGQGRPGQAGHGL
+IAWLVLHRGWYQWLGLPEPTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001499.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001499.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f37742b05ceb59258277736252b234cdcde2fbbd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001499.fa
@@ -0,0 +1,30 @@
+>0_2131
+MERPENPANRGRDLTEDLRLAHMLADNVDSITMSRFKAQDLEVSTKPDLTPVTDADRAAE
+ESIRSTLSRARARDGIVGEEFGGSLSRSGRQWVVDPIDGTKNFVRGVPVWATLIALLVDG
+EPVVGVVSAPALHRRWWAAAGQGAFAGTSLTRAQRISVSGVDDVADASLSFSSIEGWRER
+GAIREFLQLTSDVWRVRGFGDFWSYMLVAEGAVDIAAEPELELHDMAALVPIVREAGGRF
+TSLDGEDGPFGGHALATNGLLHEDVLARLRPSGGGED
+>1_723
+MERPENPATRGRDLTEDLRLAHMLADNVDSITMSRFKAQDLEVSTKPDLTPVTDADRAAE
+ESIRSTLSRARARDGVVGEEFGGSLSRSGRQWVVDPIDGTKNFVRGVPVWATLIALLIDG
+EPVVGVVSAPALHRRWWAAAGQGAFAGTSLTRAQRITVSGVDRVEDASLSFSSIEGWRER
+GSIRAFLQLTSDVWRVRGFGDFWSYMLVAEGAVDIAAEPELELHDMAALVPIVREAGGRF
+TSLDGEDGPFGGHALATNGLLHDDVLARLRAGDETEDSA
+>2_2025
+MDQTWNAARDLTEDLRLAHMLADNVDSITMSRFKAQDLEVSTKPDLTPVSDADRAAEESI
+RSTLSRARARDLILGEEFGGNLSRTGRQWVVDPIDGTKNFVRGVPVWATLIALLIDGEPV
+VGVVSAPALHRRWWAAAGQGAFAGTSLTRAQRIQVSDVDRVEDASLSFSSIEGWRERGAV
+REFLQLTSDVWRVRGFGDFWSYMLLAEGAVDVATEPELALHDMAALVPIVREAGGRFTSL
+DGEEGPFGGHALATNGLLHDEVLRRLTPGQD
+>3_462
+MERPENPATRGRDLTEDLRLAHMLADNVDSITMSRFKAQDLEVSTKPDLTPVTDADRAAE
+ESIRSTLSRARARDGIVGEEFGGSLSRSGRQWVVDPIDGTKNFMRGVPVWATLIALLIDG
+EPVVGVVSAPALHRRWWAAAGQGAFAGTSLTRAQRITVSGVDRVEDASLSFSSIEGWRER
+GSIRAFLQLTSDVWRVRGFGDFWSYMLVAEGAVDIAAEPELELHDMAALVPIVREAGGRF
+TSLDGEDGPFGGHALATNGLLHDDVLARLRAGEEAEGGA
+>4_687
+MERPENPATRGRDLTEDLRLAHMLADNVDSITMSRFKAQDLEVSTKPDLTPVTDADRAAE
+ESIRSTLSRARARDGIVGEEFGGSLSRSGRQWVVDPIDGTKNFVRGVPVWATLIALLIDG
+EPVVGVVSAPALHRRWWAAAGQGAFAGTSLTRAQRITVSGVDRVEDASLSFSSIEGWRER
+GSIRAFLQLTSDVWRVRGFGDFWSYMLVAEGAVDIAAEPELELHDMAALVPIVREAGGRF
+TSLDGEDGPFGGHALATNGLLHDDVLARLRAGDETEGGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001510.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001510.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2c72c88b7853fc7966f37774321525dcd1882073
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001510.fa
@@ -0,0 +1,45 @@
+>0_2146
+MVSVVGGRVDYSVVGLQNPMRISEMPGKTAKITVSGRMPNTRGSITRTGYSYSMTSKRAV
+IYTRISRDDRGVEAGVTRQEEDCRAKAAGLGFEVVRVYTDNDIGASTRSRKVRPEYAQML
+EAARRGAFGAILAYSTSRLTRRPREAEDLIDLVERHGVQIKTVVSGDWNLETADGRAVVR
+TLAAWDAAEAERTAERVARACEQRAAEGRTHGAVPYGWTRDADGTEHLHPERAQVIRDAA
+AHVLEGGSLRSFTLDLNARGVGSPRGGKWTAPQLKQLLLRERNAGRLVRRDPNNPRHRPV
+VGKGIWPQILDEETHDRLVAHLTDPTRRKSRGSELKHMMSGILICGVCGARCRLMPGGKS
+PDGTPRPPSYGCRECFGVKRRVAQVDEWVSYMARVRLAEKDAPALLAGDDEGARKAQRER
+DEARAKLDRAADAYAEGLIDSHQLTRISANLHKKREDAEARLARARPLGGLSFDRGASPV
+QVWRRAPVAVRRTLVEMMMTVTLLPGGRGSRFDPEQHLRIVMNDLKTSVSDILVTSGTVP
+DRPTGSEDSDPPRRE
+>0_2148
+MQVEEDDRRVVAVVEDPVREPVVCEAARRVLAGESLNSIARALNERGAPTAATDREEASR
+LWTASKVRQMLQRPGYAGLRVYRGEGVGKAAWEPLIEREQWDELQALFESSRAAQGPQDH
+RAAYLLTGIARCGVCGSKLVRRATRSGKVVRKDGTVAPKRRYDTYACAAGIDRAGAGFHV
+SMSMVHLDDYVSRLVVERLSRPDVLECLAGTEGTQSDERVALRAEIAGYREHLERARAYA
+AEHLRMDLLIDQEARLQPKIDTAERRLRELAAVDPEVRRLAEAADVRATWDALDLEGQRH
+VVRVRMTPSVLPRTRPGRRGLDPERVDVTWLSDCLESP
+>0_2320
+MVELVSLRKTNEVAAYVRASMDRKGDRWTVETQLRKIRALAEAKDWEVVEVYDDNAVSAT
+KKRRAGTRWAEMLDDARAGRFSMVVAVDMDRLLRSTKDLNTLIDLGLRVVTVDGEIDLST
+ADGEFRATMLAALARFEARRKAERQIRSNDRRRAEGIPASSWKAFGWTREGELIEAEADA
+VRRAFDAFLGEPSLSIRRIREDLNSAGHLTARGSAFSVDAVRYLLANPLYAGYIKHYASG
+ELYPVQGDAFPPIVGEQTWRAAVAKLEDNVRRSARQGNQPKYLLSTIGLCGKCGATLVSG
+TNSRKQPTYRCGEQFHLTRQREPVDAMVTEAVLTRLSSVDVHDLVMPQEDDGPDREALLT
+ERNALVERVKELSPLLLDVRQPVLEITEAIRGGKARIDQIDAEILDRSVSVAAKLLGDVD
+ESLGTMERREVVESKWKALDMDRRRMLVDELVTVTIEPIAPGHVKFDPDLIRIEPRRD
+>3_288
+MVELVALRKTNEVAAYVRASMDRKGDRWTVDTQLRKIRALAEAKDWNVVEVYEDNAVSAT
+KKRRAGTRWAEMLDDARAGRFSMVVAVDMDRLLRSTKDLNTLIDLGLRVVTVDGEIDLST
+ADGEFRATMLAALARFEARRKAERQIRSNERRRAEGIPASTWKAFGWTREGELIEEEAAA
+VRRAFDAFLGEPSLSIRRIREDLNSAGHLTARGSEFSVDAVRYLLANSLYAGFIRHYKTG
+ELYPVQGEAFPPIVGEQTWRAAVAKLEDNVRRSARQGNQPKYLLSTIGLCGKCGATLVSG
+TNSRKQPTYRCGEQFHLTRQREPVDAMVTEAVLTRLSSVDVHDLVMPQEAAGPDREELLT
+ERNALVERVKELSPLLRDIHQPVLEITAAINDVKARIDEIDAELLDRSVSVAAKLLAEVD
+EPVGTAERREVVESKWKALDMDRRRMLVDELVTVTIEPIMPGHVKFDPDLVRIEPRRD
+>3_2175
+MRAAIYLRISLDRHGDGLAVERQREDCKRIIAQRGWEHVATYEDPSVSASSRTVTRPGYE
+RMVRDWQAGRFDAVVCWDLDRLTRQPRQLEDWIDAAEQRGLHLVTANGEADLGTDAGRMF
+ARIKAAVSRQEVDRKSARQVRAAQQRAELGKGWGPRRPFGFAEDKVTHDPAEAAVVRRMY
+DDFNAGVGQREICRRLAAEGVRTSTGREWTQPALRQFLRNPRNAGLRAYRGEIIGPAEWA
+PLVSESVYRAALDRMDAPTKRVGGSGAKHLLIGVARCGVCDSPVGTNYTATHKRQYACRA
+GHVARSAEAVDAYVSEVAVGVLSTRGAAAFTRHDDAGQVELSAEADRIRARQEALAVEFA
+DGTLTAAQLRAANARMAERLEQVTAAMVAAEGNAALRPLLEAESVAAGWERLDIPRRRAV
+IDTLMNVRILRTSQGSRFDPASVEITPRTG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001512.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001512.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d15a86307c85ca6aafc9bc924abfeb938304a3ad
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001512.fa
@@ -0,0 +1,30 @@
+>0_2170
+MAVLLGLLLGGGLFLLWWSLWSPPVQRPQTARPDSRLRVLIAQSGIRRLSPAGVVSAMAV
+GGVVTGLLILAVTRTWTIAACFALFGAAVPWLLLSWQARRRTTALRELWPDAVDHARSAI
+RAGLTLPEALIQLGESGPEGLREPFRQFARDYRSGARFVDALDRLKARMADPVADRLVVS
+LRLTREVGGADIGRLLQTLSEFLRQDARTRAELEARQSWTVNAARLAVCAPWIVLLLLGT
+QPSAVAAYQSAAGGAVLLGGLVASVVCYRVMLRIGALPEEKRVFA
+>1_707
+MAALLGLALGCGLFLLWWSLWSPPTERPGAARPDSRLRVLIAQSGIQRLSPAGVVSAMAV
+GGLVVGLLVLSLTSTWTIAACFAVFGAAVPWLLLSWQARRRSTALRELWPDAIDHARSAI
+RAGLTLPEALIQLGETGPEGLREPFQQFARDYRAGARFVDALDRLKARMADPVADRLVVS
+LRLTREVGGADIGRLLQTLSEFLRQDARIRAELEARQSWTVNAARLAVCAPWLVLLLLGT
+QPAAVAAYRSAAGGAVLLAGMVASVVCYRVMLRIGALPREKRVFA
+>2_2045
+MGAVLGLGLGAGLFLMWWSLWSEPVVSAEEPRGPGRLAELIARSGIERLTPAGVVGAMAA
+GCVVAALIVLAVTRTWTIAACFGLFGAALPWALLTWQATRRTRALRDLWPDAVDHVRSAV
+RAGLTLPEALTQLGETGPEGLRAPFREFARDYRSGARFLDALERLKTRMADPVADRLVAS
+LRLTREVGGADIGLLLQSLSEFLRQDARTRAELEARQSWTVNAARLAVCAPWIVLLLLGT
+QPLAVTAYQSVAGGALLLAGLVVSALCYRIMLRIGALPQEKRVFA
+>3_447
+MAALLGLALGCGLFLLWWSLWSPPTEKPGAARTDARLRVLIAQSGIQRLSPAGVVSAMAV
+GGLVVGLLVLSLTSTWTIAACFAVFGAAVPWLLLSWQARRRSTALRELWPDAIDHARSAI
+RAGLTLPEALIQLGETGPEGLREPFQQFARDYRAGARFVDALDRLKARMADPVADRLVVS
+LRLTREVGGADIGRLLQTLSEFLRQDARIRAELEARQSWTVNAARLAVCAPWLVLLLLGT
+QPAAVAAYRSAAGGAVLLAGMVASVVCYRVMLRIGALPREKRVFA
+>4_671
+MAALLGLALGCGLFLLWWSLWSPPTEKPEAARPDSRLRVLIAQSGIQRLSPAGVLSAMAV
+GGLVVGLLVLSLTGTWTIAACFAVFGAAVPWLLLSWQARRRSTALRELWPDAIDHARSAI
+RAGLTLPEALIQLGETGPEGLREPFQHFARDYRAGARFVDALDRLKARMADPVADRLVVS
+LRLTREVGGADIGRLLQTLSEFLRQDARIRAELEARQSWTVNAARLAVCAPWLVLLLLGT
+QPAAVAAYRSAAGGAVLLAGMVASIVCYRVMLRIGALPREKRVFA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001525.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001525.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8c02cd5127fef47f0afac77a7b40552a24a05fce
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001525.fa
@@ -0,0 +1,25 @@
+>0_2189
+MAAELISGRRARMTRTTSESDVHVEMDLDGTGRAEISTSVPFYDHMLTALARHSQIDLTV
+RATGDTHIDVHHTVEDVAITLGEVLKTALGDKSGIRRFGEASVPLDEALARAVVDVSGRP
+YLVHEGEPEGQQYHLIGGHFTGSMTRHVFESITYHAAICLHMDVVRGRDPHHIVEAQFKA
+FARALRAAVEDDPRMSGVPSTKGAL
+>1_693
+MAAELISGRRARMTRTTSESDVYVEMDLDGTGRAEISTTVPFYDHMLTALSRHSQIDLTV
+RATGDTHIDVHHTVEDVAITLGEVLKTALGDKSGIRRFGEASVPLDEALARAVVDVSGRP
+YLVHEGEPEGQQYHLIGGHFTGSMTRHVFESITYHAAICLHMDVVRGRDPHHIVEAQFKA
+FARALRAAVEDDPRMTGVPSTKGAL
+>2_2060
+MAAELMSGRRARMQRTTSESDVYVEMDLDGTGTSEISTTVPFYDHMLTALSRHSQIDLTV
+RATGDTHIDVHHTVEDVAITLGEVLKTALGDKRGIRRFGEASVPLDEALARAVVDVSGRP
+YLVHEGEPEGQQYHLIGGHFTGSMTRHVFEAITYHASICLHMDVVRGRDPHHIVEAQFKA
+FARALRAAVEDDPRVHDVPSTKGAL
+>3_433
+MAAELISGRRARMTRTTSESDVYVEMDLDGTGRAEISTTVPFYDHMLTALSRHSQIDLTV
+RATGDTHIDVHHTVEDVAITLGEVLKTALGDKSGIRRFGEASVPLDEALARAVVDVSGRP
+YLVHEGEPEGQQYHLIGGHFTGSMTRHVFESITYHAAICLHMDVVRGRDPHHIVEAQFKA
+FARALRAAVEDDPRMTGVPSTKGAL
+>4_657
+MAAELISGRRARMTRTTSESDVYVEMDLDGTGRAEISTTVPFYDHMLTALSRHSQIDLTV
+RATGDTHIDVHHTVEDVAITLGEVLKAALGDKSGIRRFGEASVPLDEALARAVVDVSGRP
+YLVHEGEPEGQQYHLIGGHFTGSMTRHVFESITYHAAICLHMDVVRGRDPHHIVEAQFKA
+FARALRAAVEDDPRMTGVPSTKGAL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001526.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001526.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4eb25b343e4c1ceb3108f3c8f07ee952de5a6a8b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001526.fa
@@ -0,0 +1,40 @@
+>0_2190
+MTDLSSLPLRENLRGLSPYGAPQLDVPHMLNTNENTHPVPQEVATAIAERVAAVAGGLNR
+YPDREFTALRRALARYLGHGLTEGHVWAANGSNEILQQILQAFGGPGRTLLSFLPSYSMY
+PLLAGGTDTAFVDGGRAADHTLSAERAAAMVREHRPHVVFLASPNNPTGTALDLATIEAV
+YAAQAENESAGGPGAMIVVDEAYAEFALAGTRSALTLLPGRERLIVTRTMSKAFALAGAR
+VGYLAADPAVADALRLVRLPYHLSAVTQATAEAALDHVDALLETVEDIKGQRDRIVATLR
+ELGLEPSVSDSNFVFFGRLEDAADVWRRLLERGVLVRDVGIPHHLRVTAGTEEETTAFLE
+ALEAVLAEIGHRR
+>1_692
+MTDLSSLPLRENLRGLSPYGAPQLDVPYMLNTNENTHPVPEEVATAIAERVAAVAGGLNR
+YPDREFTGLRRALAGYLGHGLTADHVWAGNGSNEILQQILQAFGGPGRTLLSFLPSYSMY
+PLLAGGTDTVFVDGGRAEDHTLSAEHAAAMVREHRPHVVFLASPNNPTGTALDLATIEAV
+YAAQAQNEAAGGPGAMVVVDEAYAEFALAGTRSALTLLPGRERLIVTRTMSKAFALAGAR
+LGYLAADPAVADALRLVRLPYHLSAVTQATAEAALDHVDALLRTVEDIKAQRDRIVSTLR
+GLGLRPSVSDSNFVFFGHLEDASDVWRRLLDRGVLVRDVGIPHHLRVTAGTEAETTAFLT
+ALAEVLGETGDRS
+>2_2061
+MTDLSSLPLRDSLRGQSPYGAPQLDVPYMLNTNENTHPVPQAVAEAITARVAKVAGGLNR
+YPDREFTELREHLAAYLGHGITPEQVWAANGSNEVLQQILQAFGGPGRTLLSFLPSYSMY
+PLLANGTDTAFVDGGRAADHTLSAEHAAALVREHRPNVVFLASPNNPTGTALGLDVIEAI
+YAAQAQNEAEGGHGAMVVVDEAYAEFALAGTDSALTLLRGRERLIVTRTMSKAFALAGAR
+LGYLAADAAVADALRLVRLPYHLSAVTQATAIAALERVDELLETVEDIKGQRDRIVAELT
+GMGLVPAVSDSNFVFFGRLADAHAVWEALLERGVLVRDVGIPHHLRVTAGTEEETTAFLD
+ALREIVEQDPAVVSAVDAD
+>3_432
+MTDLSSLPLRENLRGLSPYGAPQLDVPYMLNTNENTHPVPEEVATAIAERVAAVAGGLNR
+YPDREFTGLRRALAGYLGHGLTADHVWAGNGSNEILQQILQAFGGPGRTLLSFLPSYSMY
+PLLAGGTDTVFVDGGRAADHTLSAEHAAAMVREHRPHVVFLASPNNPTGTALDLATIEAV
+YAAQAQNEAAGGPGAMVVVDEAYAEFALAGTRSALTLLPGRERLIVTRTMSKAFALAGAR
+LGYLAADPAVTDALRLVRLPYHLSAVTQATAEAALDHVDALLRTVEDIKAQRDRIVSTLR
+GLGLRPSVSDSNFVFFGHLEDASDVWGRLLDRGVLVRDVGIPHHLRVTAGTEPETTAFLT
+ALEEVLGETGHRS
+>4_656
+MTDLSSLPLRENLRGLSPYGAPQLDVPYMLNTNENTHPVPEEVATAIAERVAAVAGGLNR
+YPDREFTGLRRALAGYLGHGLTADHVWAGNGSNEILQQILQAFGGPGRTLLSFLPSYSMY
+PLLAGGTDTVFVDGGRAEDHTLSAEHAAAMVREHRPHVVFLASPNNPTGTALDLATIEAV
+YAAQAQNEAAGGPGAMVVVDEAYAEFALAGTRSALTLLPGRERLIVTRTMSKAFALAGAR
+LGYLAADPAVADALRLVRLPYHLSAVTQATAEAALDHVDALLRTVEDIKAQRDRIVSTLR
+GLGLRPSVSDSNFVFFGHLEDASDVWRRLLDRGVLVRDVGIPHHLRVTAGTEAETTAFLT
+ALAEVLGETGDRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001530.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001530.fa
new file mode 100644
index 0000000000000000000000000000000000000000..06eb6d37fe64fe359d44f125084aef4827637d5a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001530.fa
@@ -0,0 +1,54 @@
+>0_2194
+MTEEKNPTPAGGSEDEIQAVIDRILAADDARRSAAQGRADTPGRADAETAGDADAGTPDR
+TSALAGRALALAEGGDGHTAADGDQDELAARHSLRRVQGLSTELEDMTEVEYRQLRLERV
+VLAGVWTEGTAEDAENSLRELAALAETAGSEVLDGVIQRRATPDPATYLGKGKAQELAEI
+VALSGADTVVVDSELAPSQRRALEDVVRVKVIDRTALILDIFAQHASSREGRAQVELAQL
+EYLLPRLRGWGESMSRQAGGRAAGGEGIGSRGPGETKIELDRRRIRTRMAKLRKDIAGMK
+PAREAKRANRRRNRVPSVAIAGYTNAGKSSLLNRLTHAGVLVENALFATLDPTVRKAMTP
+DGIGYTLSDTVGFVRNLPTQLVEAFRSTLEEVADADVILHVVDGSHPDPEGQISAVRSVF
+AEVDAHRIPEIIVLNKADAADPAVVARIRAKEPHTVVVSARTGEGIEELERAIAATIPRP
+DVRLELLIPFTRGELVSRLHSEDAEILAEGYEEGGTRLSVLVRQDLAPEYEDYVVDPAAS
+>1_688
+MTEKNQHTPGPQGAHGSEDEIQAVIDRILAADDARRASEREATGRGSADSVVADHEDAPD
+AGTPDRSGALAGRALALDEGEDGHTDADGDQDELAARHSLKRVQGLSTELEDMTEVEYRQ
+LRLERVVLAGVWTEGSAEDAENSLRELAALAETAGSEVLDGVIQRRATPDPATFLGKGKA
+QELAEIVALSGADTVVVDSELAPSQRRALEDVVRVKVIDRTALILDIFAQHASSREGRAQ
+VELAQLEYLLPRLRGWGESMSRQAGGRAAAGEGIGSRGPGETKIELDRRRIRTRMAKLRR
+DIAGMKPAREAKRANRRRNRVPSVAIAGYTNAGKSSLLNRLTHAGVLVENALFATLDPTV
+RKAMTPDGIGYTLSDTVGFVRNLPTQLVEAFRSTLEEVADADVILHIVDGSHPDPEGQIA
+AVRSVFAEVHAHRIPEIIVLNKADAADPAVIARIRAKEPHAVVVSARTGEGIDELERAIA
+ATIPRPDVRLELLIPFTRGELVSRLHSADAEILAEGYEEGGTRLSVLVREDIAPDFAEFV
+VEADAL
+>2_2065
+MTEEKNPTPAGGSEDEIQAVIDRILAADDARRATEREAAGRGSADSAAADHEGAPDRSGA
+LAGRALALAEGGDGHTAADGDQDELAARHSLKRVQGLSTELEDMTEVEYRQLRLERVVLA
+GVWTEGTAEDAENSLRELAALAETAGSEVLDGVIQRRATPDPATFLGKGKARELADVVAL
+TGADTVIVDSELAPSQRRALEDVVRVKVIDRTALILDIFAQHATSREGRAQVELAQLEYL
+LPRLRGWGESMSRQAGGRAAGGEGIGSRGPGETKIELDRRRIRTRMAKLKKDIAGMKPAR
+EAKRANRRRNRVPSVAIAGYTNAGKSSLLNRLTHAGVLVQNALFATLDPTVRKAVTPDGI
+GYTLSDTVGFVRNLPTQLVEAFRSTLEEVADADVILHVVDASHPDPEGQIAAVRSVLREV
+DAQSVPEIIVLNKADAAEPDVIARIRAKEPHTVVVSARTGEGIPELESAISATIPRPDVR
+LELLVPFTDGQVVSRLHSVDAEILSETYEETGTRLTVLVRRDIAADLEGYRVDAAAGDDA
+QEAASA
+>3_428
+MTEKNQHTPGPQGAHGSEDEIQAVIDRILAADDARRASEREATGRGSADGAAAEHRDAPD
+AGTPDRSGALAGRALALDEGEDGHTDADGDQDELAARHSLKRVQGLSTELEDMTEVEYRQ
+LRLERVVLAGVWTEGSAEDAENSLRELAALAETAGSEVLDGVIQRRATPDPATFLGKGKA
+QELAEIVALSGADTVVVDSELAPSQRRALEDVVRVKVIDRTALILDIFAQHASSREGRAQ
+VELAQLEYLLPRLRGWGESMSRQAGGRAAAGEGIGSRGPGETKIELDRRRIRTRMAKLRR
+DIAGMKPAREAKRANRRRNRVPSVAIAGYTNAGKSSLLNRLTHAGVLVENALFATLDPTV
+RKAMTPDGIGYTLSDTVGFVRNLPTQLVEAFRSTLEEVADADVILHVVDGSHPDPEGQIA
+AVRSVFAEVDAHRIPEIIVLNKADAADPAVVARIRSKEPHAVVVSARTGEGIDELERAIA
+ATIPRPDVRLELLIPFTRGELVSRLHSADAEILAEGYEEGGTRLSVLVREDIAPDFAEFV
+VEADAS
+>4_652
+MTEKNQHTPGPQGAHGSEDEIQAVIDRILAADDARRASEREATGRGSADSVVADHEDAPD
+AGTPDRSGALAGRALALDEGEDGHTDADGDQDELAARHSLKRVQGLSTELEDMTEVEYRQ
+LRLERVVLAGVWTEGSAEDAENSLRELAALAETAGSEVLDGVIQRRATPDPATFLGKGKA
+QELAEIVALSGADTVVVDSELAPSQRRALEDVVRVKVIDRTALILDIFAQHASSREGRAQ
+VELAQLEYLLPRLRGWGESMSRQAGGRAAAGEGIGSRGPGETKIELDRRRIRTRMAKLRR
+DIAGMKPAREAKRANRRRNRVPSVAIAGYTNAGKSSLLNRLTHAGVLVENALFATLDPTV
+RKAMTPDGIGYTLSDTVGFVRNLPTQLVEAFRSTLEEVADADVILHVVDGSHPDPEGQIA
+AVRSVFAEVDAHRIPEIIVLNKADAADPAVVARIRSKEPHAVVVSARTGEGIDELERAIA
+ATIPRPDVRLELLIPFTRGELVSRLHSADAEILAEGYEEGGTRLSVLVREDIAPDFAEFV
+VEADAS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001531.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001531.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9b2404b35e2620cfa5ce68c7be4270d4225cffbe
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001531.fa
@@ -0,0 +1,37 @@
+>0_2195
+MRTILAADRRRRHPSPVGEHAPAVPTLGRMTPHPDRHVTVLVVGAGQAGLSAAHHLRRRG
+FQPVGPGEAPRPAPEGSPGTFAVLDAEDRPGGAWLHRWDTLTMGSVNHIHELPGHPVPPA
+DPAARANAVLPAYFAEYEERFDLRVHRPVRVSRVERIGEPGAAEGFRVHTDAGTWTCGFL
+VNATGTWTSPHWPAVPGRREFRGRQLHTHDYRDPEEFARRRVVVVGMGVSATQHLAEVSR
+VADTLWVTRREPRWIDDPDPGHLAESVEGVDERTRLGLAPRSVVSATGMFRSDWVREAQA
+RGVLERHPMFERIEPDGVRMPDGSLERADVILWATGFRPAVRHLAPLRLRTPDGGIRAAH
+GRALDEPRLFLIGYGPSQSTVGANRAGRDAVRAILADLRAAGAA
+>1_684
+MGRTQWPLTDEFAGQRVVIVGMGVSATQLLAEISTVADTLWVTRREPRWQDSAAPGALAE
+SVRGVDERTRAGLPPGSVVGATGMHRSSWVREAESRGVLVRHPMFTAVEPDGVRMPDGSF
+EPADVILWATGFRPAIRHLAPLRLRTPAGGIRVAGGRALDEPRLFLLGYGPSQSTVGANR
+AGRDAVRAILADLAGPASG
+>2_2067
+MTPHPDRHVTVLVVGAGQAGLSAAHHLRRRGFLPVGPGEAPGPAPGGSPGTFAVLDAEDR
+PGGAWLHRWDTLTMGSVNHIHELPGHPVPPADPDAQANAVLPAYFAEYEERFDLRVHRPV
+RVSRVERIGEPGAAEGFRVHTDTGTWTCGFLVNATGTWTSPHWPAVPGRREFRGRQLHTH
+DYRGPQEFAGRRVVVVGMGVSATQHLAEVSRVADTLWVTRREPRWIDDPDPGHLAESVEG
+VDERTRLGLAPRSVVSATGMFRSDWVREAQARGVLERHPMFERIEPDGVRMPDGSLERAD
+VILWATGFRPAVRHLAPLRLRTPDGGIRAAHGRALDEPRLFLIGYGPSQSTVGANRAGRD
+AVRAILADLRAAGAA
+>3_427
+MGVECTGRRVWATGAPAPGPLTTRTYPAGMTASPSPAPPRPGRTGRATVVVIGAGQAGLS
+AAYHLRRRGFVGLGPNDDGAAGVPDDAPGTFVVLDAETAPGGAWQHRWDSLTMATVNHIH
+ELPGDPVPPADPAAHANTLLPAYFADYEARFALPIRRPVRVRRVERIGEPGRARGFFVRT
+DGAPGTWRADFVVNATGTWTSPRWPSVPGMRSFRGRQLHTRDYVSKDEFAGQRVVIVGMG
+VSATQLLAEISTVADTLWVTRREPQWQDSAAPGALAESVRGVDERTRAGLPPGSVVGATG
+MHRSSWVREAETRGVLVRHPMFMAVEPDGVRMPDGSFEPADVILWATGFRPAIRHLAPLR
+LRTPAGGIRVAGGRALDEPRLFLLGYGPSQSTVGANRAGRDAVRAILADLAGPASG
+>4_651
+MGVECTGRRVWATGAPAPGPLTTRTYPAGMTASPSPAPPRPGRTGRATVVVIGAGQAGLS
+AAYHLRRRGFVGLGPNDDGAAGVPDDAPGTFVVLDAETAPGGAWQHRWDSLTMATVNHIH
+ELPGDPVPPADPAAHANTLLPAYFADYEARFALPIRRPVRVRRVERIGEPGRARGFFVRT
+DGAPGTWRADFVVNATGTWTSPRWPSVPGMRSFRGRQLHTRDYVSKDEFAGQRVVIVGMG
+VSATQLLAEISTVADTLWVTRREPQWQDSAAPGALAESVRGVDERTRAGLPPGSVVGATG
+MHRSSWVREAETRGVLVRHPMFMAVEPDGVRMPDGSFEPADVILWATGFRPAIRHLAPLR
+LRTPAGGIRVAGGRALDEPRLFLLGYGPSQSTVGANRAGRDAVRAILADLAGPASG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001532.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001532.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d35cbe4c3898b5c58fea4c7bbd49c0bf3a3f2a5b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001532.fa
@@ -0,0 +1,25 @@
+>0_2196
+MVAVTSPAHYFSPDPGTPERRRSVDVELAGRRVTLQTANGVFSPDGIDKGTAALLSAVPA
+PPARGAFLDVGAGWGPLALTLALASPEAEVTGVEVNERSLALARDNAAAVGASNARFLTP
+EQIPDDARFDLIWSNPPIRIGKAALHDLLAQWLPRLAPGGEAWLVVQKNLGADSLLPWIA
+GMLQEQAPGEFTATRAATVKGFRILRISRAAESSS
+>1_683
+MVAVSSASHYFDADPSAPERRRTVRTRLAGRDVEVQTANGIFSPDGLDKGTAALFSAVPA
+PPARGRFLDVGAGWGPIALTLALRSPEAEVTAVEVNDRSLQLTRDNAAALGLDNLVALRP
+EDVPEGAEFDLIWSNPPIRIGKPALHALLERWLPRLAPGGEAWLVVQKNLGADSLLPWIG
+RMLEERAPGRFTAERADSVKGFRILRVARAR
+>2_2068
+MDAVTSPAHYFSPDPGTPERRRRVDVEIAGRRVTLQTANGVFSPDGIDKGTAALLSAVPA
+PPARGAFLDVGAGWGPLALTLALTSPEAEVTGVEVNERSLALARDNAAAVGAQNARFLTP
+EQVPDDARFDLIWSNPPIRIGKAALHDLLAQWLPRLAPGGEAWLVVQKNLGADSLLPWIS
+GMLQERAPGEFTATRAATVKGFRILRISRAAESSS
+>3_426
+MVAVSSASHYFDADPSAPERRRTLRTRLAGRDVEVQTANGIFSPDGLDKGTAALFSAVPA
+PPATGRFLDVGAGWGPIALTLALRSPEAEVTAVEVNDRSLQLTRDNAAALGLDNVVALRP
+EDVPEDAEFDLIWSNPPIRIGKPALHALLERWLPRLAPGGEAWLVVQKNLGADSLLPWIG
+RMLEERAPGRFTAERADSVKGFRILRVVRAR
+>4_650
+MVAVSPASHYFDADPSAPERRRTLRTRLAGRDVEVQTANGIFSPDGLDKGTAALFSAVPA
+PPATGRFLDVGAGWGPIALTLALRSPEAEVTAVEVNDRSLQLTRDNAAALGLDNVVALRP
+EDVPEDAEFDLIWSNPPIRIGKPALHALLERWLPRLAPGGEAWLVVQKNLGADSLLPWIG
+RMLEERAPGRFTAERADSVKGFRILRVVRAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001533.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001533.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d8ff0e8e141686e97208c798f7f1a5bdfae5d1e7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001533.fa
@@ -0,0 +1,35 @@
+>0_2199
+MTEKTAAAAAPTSDAAPRVPFTKGHGTGNDFVLLADPDGNVHLEAAQVAVLADRHRGIGG
+DGVIRAVPSRHVEEGRALLAAHPEAEWFMDYRNGDGSIAEMCGNGVRVFVHFLSEKGLVD
+LAPGESITIGTRAGVKTVSRLAHGYAIDMGPWSYLDPELAEEAASDAMVLAAGLADPRPA
+LSVSMGNPHTVVPLASFEDLEGLDLTRAPEVDPAPSHGSNVEFVAAHEPLVREGVGRARM
+RVHERGVGETQSCGTGACAVAVAMRAWSGEGGSDSWLVEVPGGVLGVDFVAHPDGTEHVV
+LAGPAELVFDGELTV
+>1_682
+MTEQPAAPAAQDPLHASAPRVPFTKGHGTGNDFVLIADPDGNTQLDAQRVARLADRHRGI
+GADGVIRAVRSARLPEGEALLAEHPEAEWFMDYRNGDGSIAEMCGNGVRVFVHFLVEKGL
+VDLAPGRAITIGTRAGVKAVTRLEHGYAIDMGPWSYLNPELAEEAASDSMVLAHGLTDPR
+PALSVSMGNPHTVVPLASFADLQGLDLGRAPEVDPAPPHGTNVEFVAAHEPLVREGVGRV
+RMRVHERGVGETQSCGTGACAVAVAMRAWSGDQGTDSWLVEVPGGVLAVDVVPGPEGAEH
+VVLSGPAELVFDGELTA
+>2_2070
+MTEQPAAPAAQDPLHASAPRVPFTKGHGTGNDFVLIADPDGNTQLDAQHVARLADRHRGI
+GADGVIRAVRSARLPEGEALLAEHPEAEWFMDYRNGDGSIAEMCGNGVRVFVHFLVEKGL
+VDLAPGQAITIGTRAGVKAVTRLEHGYAIDMGPWSYLDPELAEEAASDSMVLAHGLPDPR
+PALSVSLGNPHTVVPLASFADLQGLDLGRAPEVDPAPPHGTNVEFVAAHEPLVREGVGRV
+RMRVHERGVGETQSCGTGACAVAVAMRAWAGDQGTDSWLIEVPGGVLAVDVVPGPEGAEH
+VVLSGPAELVFDGELTV
+>3_425
+MTEQPAAPAAQDPLHASAPRVPFTKGHGTGNDFVLIADPDGNTQLDAERVARLADRHRGI
+GADGVIRAVRSARLPEGEALLAEHPEAEWFMDYRNGDGSIAEMCGNGVRVFVHFLVEKGL
+VDLAPGQAITIGTRAGVKAVTRLEHGYAIDMGPWSYLDPELAEEAASDSMVLAHGLTDPR
+PALSVSMGNPHTVVPLASFADLEGLDLGRAPEVDPAPPHGTNVEFVAAHEPLVREGVGRV
+RMRVHERGVGETQSCGTGACAVAVAMRAWSGDQGSDSWLVEVPGGVLAVDVVPGPEGAEH
+VVLSGPAELVFDGELTA
+>4_649
+MTEQPAAPAAQDPLHASAPRVPFTKGHGTGNDFVLIADPDGNTQLDAQRVARLADRHRGI
+GADGVIRAVRSARLPEGEALLAEHPEAEWFMDYRNGDGSIAEMCGNGVRVFVHFLVEKGL
+VDLAPGRAITIGTRAGVKAVTRLEHGYAIDMGPWSYLDPELAEEAASDSMVLAHGLTDPR
+PALSISMGNPHTVVPLASFADLQGLDLGRAPEVDPAPPHGTNVEFVAAHEPLVREGVGRV
+RMRVHERGVGETQSCGTGACAAAVAMRAWSGDQGSDSWLVEVPGGVLAVDVVPGPEGTEH
+VVLSGPAELVFDGELTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001535.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001535.fa
new file mode 100644
index 0000000000000000000000000000000000000000..824a232cc8e339b636fbbcb8332418b45d0f65be
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001535.fa
@@ -0,0 +1,49 @@
+>0_2201
+MNVHDSERISGLLESTGYAPVPQDAQADLVVFNTCAVRENADNRLYGNLGNLRAVKDARP
+GMQIAVGGCLAQKDQATIQRKAPWVDVVFGTHNIGSLPVLLERSRHNAEAEIEILESLEV
+FPSTLPTKRDSTHSGWVSISVGCNNTCTFCIVPSLRGKEKDRRPGEILAEVQALVDAGAV
+EVTLLGQNVNTYGVEFGDRGAFAKLLRACGQIEGLERVRFTSPHPAAFTDDVIDAMAETP
+NVMPQLHMPLQSGSDTVLKAMRRSYRSKRFLGILEKVRERIPHAAITTDIIVGFPGETEE
+DFQDTMRVVEASRFSSAFTFQYSIRPGTPAGEMADQVPKAVVQERFERLVALQDRISAEE
+MATLVGTRQELLVTADSGTKASERGRLSGRARDNRLVHFSVPAGAPTPRPGDFVTVTVTE
+AHPFFAVADPAPEDYSLRRSRAGDAWDRAQAESCGVPTPGASGGAGATSLGMPTLRPRS
+>1_680
+MTLTDPTPRTTPLAQDGAAARPHEGLTYEVRTFGCQMNVHDSERISGLLESTGYAPVAED
+AQADLVVFNTCAVRENADNRLYGNLGNLRAVKDAHPGMQIAVGGCLAQKDQAAIQRRAPW
+VDVVFGTHNIGSLPVLLERSRHNAEAEIEILESLEVFPSTLPTKRDSTHSGWVSISVGCN
+NTCTFCIVPSLRGKEKDRRPGEILAEVQALVDAGAVEVTLLGQNVNTYGVEFGDRGAFAK
+LLRACGEIEGLERVRFTSPHPAAFTDDVIDAMAETPNVMPQLHMPLQSGSDKVLKDMRRS
+YRSAKFLRILEKVRERIPHAAITTDIIVGFPGETEEDFAETMRVVEASRFSSAFTFQYSI
+RPGTPAGEMDHQVPKAVVQERFERLVALQDRISAEEMATLVGTRQELLVTADSGSKAAER
+GRLSGRAPDNRLVHFSVPAGAETPRPGDFVTVTVTEAHPFFAVADPTAQDYVLRRSRAGD
+AWDRAQAESCGAPAPGTAGGSGATSLGMPTLRPRS
+>2_2072
+MTLTDPTTHLPALGTAPDAHAGLTYEVRTFGCQMNVHDSERISGLLESTGYTPAEDGTQP
+DLVVFNTCAVRENADNRLYGNLGNLRPVKDAHPGMQIAVGGCLAQKDQATIQEKAPWVDV
+VFGTHNIGSLPALLERSRHNAEAEMEILESLEVFPSTLPTKRESTHSGWVSISVGCNNTC
+TFCIVPSLRGKEKDRRPGEILAEVQALVDAGAVEVTLLGQNVNTYGVEFGDRGAFAKLLR
+ACGEIDGLERVRFTSPHPAAFTDDVIDAMAETPNVMPQLHMPLQSGSDKVLKDMRRSYRS
+AKFLRILEKVRERIPHAAITTDIIVGFPGETEEDFAETMRVVEASRFSSAFTFQYSIRPG
+TPAGEMDHQVPKAVVQERFERLVALQDRISAEEMATLVGTRQELLVTADSGSKATERGRL
+SGRAPDNRLVHFSVPAGAETPRPGDFVTVTVTEAHPFFAVADPTAQDYVLRRSRAGDAWD
+RAQAESCGAPAPGAAGGSGATSLGMPTLRPRF
+>3_423
+MTLTDPTPRTTPLAQDGAAARPHEGLTYEVRTFGCQMNVHDSERISGLLESTGYAPVAED
+AQADLVVFNTCAVRENADNRLYGNLGNLRAVKDAHPGMQIAVGGCLAQKDQAAIQRRAPW
+VDVVFGTHNIGSLPVLLERSRHNAEAEIEILESLEVFPSTLPTKRDSTHSGWVSISVGCN
+NTCTFCIVPSLRGKEKDRRPGEILAEVQALVDAGAVEVTLLGQNVNTYGVEFGDRGAFAK
+LLRACGEIEGLERVRFTSPHPAAFTDDVIDAMAETPNVMPQLHMPLQSGSDRVLKDMRRS
+YRSAKFLRILEKVRERIPHAAITTDIIVGFPGETAEDFAETMRVVEASRFSSAFTFQYSI
+RPGTPAGEMDHQVPKAVVQERFERLVALQDRISAEEMATLVGTRQELLVTADSGSKAAER
+GRLSGRAPDNRLVHFSVPAGAETPRPGDFVTVTVTEAHPFFAVADPTAQDYVLRRSRAGD
+AWDRAQAESCGAPAPGTAGGSGATSLGMPTLRPRS
+>4_647
+MTLTDPTPRTTPLAQDGAAARPHEGLTYEVRTFGCQMNVHDSERISGLLESTGYAPVAED
+AQADLVVFNTCAVRENADNRLYGNLGNLRAVKDAHPGMQIAVGGCLAQKDQAAIQRRAPW
+VDVVFGTHNIGSLPVLLERSRHNAEAEIEILESLEVFPSTLPTKRDSTHSGWVSISVGCN
+NTCTFCIVPSLRGKEKDRRPGEILAEVQALVDAGAVEVTLLGQNVNTYGVEFGDRGAFAK
+LLRACGEIEGLERVRFTSPHPAAFTDDVIDAMAETPNVMPQLHMPLQSGSDKVLKDMRRS
+YRSAKFLRILEKVRERIPHAAITTDIIVGFPGETEEDFAETMRVVEASRFSSAFTFQYSI
+RPGTPAGEMDHQVPKAVVQERFERLVALQDRISAEEMATLVGTRQELLVTADSGSKAAER
+GRLSGRAPDNRLVHFSVPAGAETPRPGDFVTVTVTEAHPFFAVADPTAQDYVLRRSRAGD
+AWDRAQAESCGAPAPGTAGGSGATSLGMPTLRPRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001542.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001542.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4af468ec85c2bdcde5b77ad683ad42c75481dd16
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001542.fa
@@ -0,0 +1,89 @@
+>0_2209
+MVLPRPTRRRPARGAQGVFDAERADDPAGSRDADRDASDDFDPWVDEEDAPEDADAEPTP
+PAGVRRPTAADRALEQVREHARAQREAAAAAEEPAEDADVDLEVEEPGRAAGPAAPSSPA
+AAVPSSTPEPVPPVTAEPARGTQSELGGDVSYTLPQSALLPAGPQPKERSEANDRVVAAL
+TTTFTEFKVDAQVTGFSRGPTVTRYEVEVAPGTKVEKVTALEKNIAYAVASSDVRILSPI
+PGKRAIGIEIPNTDKEVVALGDVLRSQAAQRTDHPMVMGVGKDVEGGYVVANLAKMPHML
+VAGATGAGKSSFVNSMITSILMRSTPDEVRMVMVDPKRVELTAYEGVPHLVTPIITSPKK
+AAEALQWVVKEMDTRYDDLAAFGYKHVDDFNKAVRAGQVKLPPDSKRVLRPYPYLLVIVD
+ELADLMMVAPRDVEDAIVRITQLARAAGIHLVLATQRPSVDVVTGLIKANVPSRMAFATS
+SVTDSRVVLDQPGAEKLLGQGDALFLPMGKSKPMRVQGAWVNESEIHAVVEHVKSQMQVQ
+YREDVVPEKTEKVIDEDIGEDLDLLLQAVELVVTTQFGSTSMLQRKLRVGFAKAGRLMDL
+MESRGVVGPSEGSKARDVLVKPDDLADVLATISGDAPPSGGSGEGGAPAAAPAAPASAGP
+RDLVQEDLDARPAAQSWDDEDDDEGSEDAWQLTGR
+>1_669
+MPAVSAVRGSLVGMATRTSPTRSSSSSATSRSGSAGRRGSGRKGSTATVPEADRPAAPLR
+ALHTLWMGLATPVGAGFRKLGPDVRIDREERRDGTGLVLLLLAALIAAVEWWGLRGTAVG
+RVVHGVVGGTVGWFALLVPIALLVVAVRCFRHATDHRANGRIIIGLLMATVAGSGIAHLV
+GGVPSAADAFEDMLGAGGMVGYLATAPLASLLTPVPVWVLMILLAFFSVLVLTATPVGSI
+PQRIAGGYDWLTGQDPEGASEQRAARRAERRRAREERREAEDLAAPLSVDAETGRTHPDH
+DQSYLDGPAAGAHAAGASRPGLFARLFGGRRAREEQAADAAPEHTASTAYDSPVIHEAEV
+GSHAAPEAETTQVLPRPAPRRAARGEQGVFDSEQAAADARDAGRDASDDFDPWVDEDDAP
+EDADAEPQPPAGVRRPTAADRALEQVREHARAQREAAAPAAAAPEEDAGEDTPFALDDAP
+RQGSGAAAPSSSSAVPASTPAPVPPVTAEPARGTQSELGGDVSYTLPQSALLPAGPQPKE
+RSEANDRVVAALTTTFTEFKVDAQVTGFSRGPTVTRYEVEVAPGTKVEKVTALEKNIAYA
+VASSDVRILSPIPGKRAIGIEIPNTDKEVVALGDVLRSQAAQRTDHPMVMGVGKDVEGGY
+VVANLAKMPHMLVAGATGAGKSSFVNSMITSILMRSTPDEVRMVMVDPKRVELTAYEGVP
+HLVTPIITSPKKAAEALQWVVKEMDTRYDDLAAFGYKHVDDFNKAVRAGQVKLPPDSKRV
+LRPYPYLLVIVDELADLMMVAPRDVEDAIVRITQLARAAGIHLVLATQRPSVDVVTGLIK
+ANVPSRMAFATSSVTDSRVVLDQPGAEKLLGQGDALFLPMGKSKPMRVQGAWVNESEIHA
+VVEHVKSQMQVQYRADVIPEKTEKVIDEDIGDDLDLLLQAVELVVTTQFGSTSMLQRKLR
+VGFAKAGRLMDLMESRGVVGPSEGSKARDVLVKPDDLADVLATISGDTPPSATSGDGDAS
+AGTGDGDASASAAPRDLVQEDLDSRPAAVDWNDEDDDEGSEDAWQLTGR
+>2_2079
+MATRTSPARSSSSSAKSRSGSSRPAKGSSGKGASAASPDLDRQPAFARAVRTGWMALATP
+VGAAVRKAGPDVRIARDDRRDGTGLLLVLVALLVAAVEWWGLRETAVGGVVHDVVGGTVG
+WFAFLLPVVLGVVAVRCFRHPLDHRANGRIVIGLLLATVAGSGIAHLVGGLPSAAESFAD
+VLHAGGIVGYLATVPLASLLTAVPVWALMVALAVFSLLVITATPLGSIGSRLRGAYAWLT
+GQDAEDAEARREQRRAERADRREAGEHRGEQTTADLFGDDRPGGRTHPDHDQSYLDAHGS
+SAAPAPARRPGLLARLFGRGHEEPAPAGRVSAPRAYESAVVEEAPAASRAASGSHAADEA
+PAAAVEPARPARRRNAAPRRAAATEVFDAEAPRGRRSAPPADDDFDPWVDEDSADDLDRA
+DDADTGALEVVPPAGVKRPTAADRALEQVREHARSQREATVEEAEKAEEHDDEAWDEHET
+LVLPTAAASAPAPAPAAVVPSVSRPEPVPEVTPEPARPSRPPQDGGHPYELPQSALLPAG
+PQPKERTESNDRVVQALTTTFTEFKVDAQVTGFSRGPTVTRYEVEVAPGTKVEKVTALEK
+NIAYAVASSEVRILSPIPGKRAIGIEIPNTDKEVVALGDVLRSQAAQRNDHPMIMGVGKD
+VEGGYVVANLAKMPHMLVAGATGAGKSSFVNSMIVSILMRSTPDEVRMVMVDPKRVELTA
+YEGVPHLVTPIITSPKKAAEALQWVVKEMDTRYDDLAAFGFKHVDDFNRAVRAGEVKLPP
+DSKRVLRPYPYLLVIVDELADLMMVAPRDVEDAIVRITQLARAAGIHLVLATQRPSVDVV
+TGLIKANVPSRMAFATSSVTDSRVVLDQPGAEKLLGQGDALFLPMGKSKPMRVQGAWVNE
+SEIHAVVEHVKAQMQVQYREDVVPEKSEKVIDEDIGDDLDLLLQAVELVVTTQFGSTSML
+QRKLRVGFAKAGRLMDLMESRGVVGPSEGSKARDVLVKPDDLADVLATINGDTPPSRPAA
+PASAAAPAPAPAAATEAAPDRWASADLVGDDLDSRPAATSWDGEDDDEGSEDAWQLTGR
+>3_415
+MATRTSPTRSSSSSATSRSGSAGRRGSGRKGSTATVPEADLPAAPLRALHTLWMGLATPV
+GAGFRKLGPDVRIDREERRDGTGLLLLLLAALIAAVEWWGLRGTAIGRVVHGVVGGTVGW
+FALLVPIALLVVAVRCFRHATDHRANGRIIIGLLMATVAGSGIAHLVGGVPSAAEAFEDM
+LGAGGMVGYLATAPLASLLTPVPVWVLMILLAFFSVLVLTATPVGSIPQRLAGGYDWLTG
+QDPEGASERRAARRDERRRAREVRREAEDLATPLSVDAETGRTHPDHDQSYLDGPAAGAH
+AAGASRPGLLARLFGGRRAREDQAADAAPEHTAGTAYDSPVIHEAEAGSHAAPEAETTQV
+LPRPAPRRAARGEQDVFDAERAAANARDADQDASDDFDPWVDEDDAPEDADAEPQPPAGV
+RRPTAADRALEQVREHARAQREAAAPAAASLEEDAGEDTPFALDDAPGQGSGTAASSSAV
+PASTPAPVPPVTAEPARGTQSPLGGDVSYTLPQSALLPAGPQPKERSEANDRVVAALTTT
+FTEFKVDAQVTGFSRGPTVTRYEVEVAPGTKVEKVTALEKNIAYAVASSDVRILSPIPGK
+RAIGIEIPNTDKEVVALGDVLRSQAAQRTDHPMVMGVGKDVEGGYVVANLAKMPHMLVAG
+ATGAGKSSFVNSMITSILMRSTPDEVRMVMVDPKRVELTAYEGVPHLVTPIITSPKKAAE
+ALQWVVKEMDTRYDDLAAFGYKHVDDFNKAVRAGQVKLPPDSKRVLRPYPYLLVIVDELA
+DLMMVAPRDVEDAIVRITQLARAAGIHLVLATQRPSVDVVTGLIKANVPSRMAFATSSVT
+DSRVVLDQPGAEKLLGQGDALFLPMGKSKPMRVQGAWVNESEIHAVVEHVKSQMQVQYRA
+DVIPEKTEKVIDEDIGDDLDLLLQAVELVVTTQFGSTSMLQRKLRVGFAKAGRLMDLMES
+RGVVGPSEGSKARDVLVKPDDLADVLATISGDTPPSATSGDGDASASAGPRDLVQEDLDS
+RPAAVDWNDEDDDEGSEDAWQLTGR
+>4_639
+MATRTSPTRSSSSSSATSRSGSAGRRGSGRKGSTATVPEADRPAAPLRALHTLWMGLATP
+VGAGFRKLGPDVRIDREERRDGTGLVLLLLAALIAAVEWWGLRGTAVGRVVHGVVGGTVG
+WFALLVPIALLVVAVRCFRHATDHRANGRIIIGLLMATVAGSGIAHLVGGVPSAADAFED
+MLSAGGMVGYLATAPLASLLTPVPVWVLMILLAFFSVLVLTATPVGSIPQRIAGGYDWLT
+GQDPEGASEQRAARRAERRRAREERREAEDLATPLSVDAETGRTHPDHDQSYLDGPAAGA
+HAAGASRPGLFARLFGGRRAREEQAADAAPEHTASTAYDSPVIHEAEAGSHAAPEAETTQ
+VLPRPAPRRAARGEQGVFDAEQAAADARDAGRDASDDFDPWVDEDDAPEDADAEPQPPAG
+VRRPTAADRALEQVREHARAQRESAAPAAARQEGDAGEDTPFALDDAPGQGSGAAAPSSS
+SAVPASTPAPVPPVTAEPARGTQSELGGDVSYTLPQSALLPAGPQPKERSEANDRVVAAL
+TTTFTEFKVDAQVTGFSRGPTVTRYEVEVAPGTKVEKVTALEKNIAYAVASSDVRILSPI
+PGKRAIGIEIPNTDKEVVALGDVLRSQAAQRTDHPMVMGVGKDVEGGYVVANLAKMPHML
+VAGATGAGKSSFVNSMITSILMRSTPDEVRMVMVDPKRVELTAYEGVPHLVTPIITSPKK
+AAEALQWVVKEMDTRYDDLAAFGYKHVDDFNKAVRAGQVKLPPDSKRVLRPYPYLLVIVD
+ELADLMMVAPRDVEDAIVRITQLARAAGIHLVLATQRPSVDVVTGLIKANVPSRMAFATS
+SVTDSRVVLDQPGAEKLLGQGDALFLPMGKSKPMRVQGAWVNESEIHAVVEHVKSQMQVQ
+YREDVIPEKTEKVIDEDIGDDLDLLLQAVELVVTTQFGSTSMLQRKLRVGFAKAGRLMDL
+MESRGVVGPSEGSKARDVLVKPDDLADVLATISGDTPPSAASGDGDASASAAPRDLVQED
+LDSCPAAVDWNDEDDDEGSEDAWQLTGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001543.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001543.fa
new file mode 100644
index 0000000000000000000000000000000000000000..46a25888ef929d01877535a2cb9bd93655d5b1e0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001543.fa
@@ -0,0 +1,55 @@
+>0_2210
+MTPGTRLSTPPKLKKGTCRIVQLGGLEEVGRNMVTFEIDGKILIVDCGVLFPEEHQPGVD
+LILPDFDYIRDRMDDVVGIVLTHGHEDHIGAVPYLLRLRDDIPVIGSKLTLALIEAKLEE
+HRIKPRTRVVKEDEIVEFGPFECEFVAVNHSIPDALAVAIHTDAGTILHTGDFKMDQLPL
+DGRITDLRAFARLGEEGVDLFMTDSTNAEVPGFTTTEAEIGPTLERYFATAKRRIVVASF
+SSHVHRVQQVLDAAHKHGRKVAFGGRSMIRNMTIAAKLGYLNVPNGILVDIRKVDKYKDD
+EVVLMVTGSQGEPMAALSRMANGDHQVQLEEGDLVVLASSLIPGNENSVFRVINGLMKLG
+ANVVHKGMAKVHVSGHASEGELLYCYNIVEPEFVMPVHGETRHLIANGRIAEKTGVPAEN
+VILAGNGTVVDMTDGLVKVVGEVDCGYVYVDGSSVGEISDSDLKDRRVLGEEGFISIITV
+VNRQTGSIVSGPDIHARGVAEDEKVFEDIKPKIARALEEAVQSSKDHTAHQLQQVVRRTV
+GTWVNRKLRRRPMIIPVVLEA
+>1_668
+MTAGTRLSTPPKLKRGTCRIVQLGGLEEVGRNMVTFEIDGKILIVDCGVLFPEEHQPGVD
+LILPDFDYIRDRVDDVVGIVLTHGHEDHIGAVPYLLRLRDDIPVIGSKLTLALIEAKLEE
+HRIKPRTRVVKEDDIVEFGPFECEFVAVNHSIPDALAVAIHTDAGTILHTGDFKMDQLPL
+DGRITDLRAFARLGEEGVDLFMTDSTNAEVPGFTTTEAEIGPTLERYFATAKRRIVVASF
+SSHVHRVQQVLDAAHKHGRKVAFGGRSMIRNMTIAAKLGYLNVPNGILVDIRKVDKYRDD
+EIVLMVTGSQGEPMAALSRMANGDHQVQLEEGDLVVLASSLIPGNENSVFRVINGLMKLG
+ATVVHKGMAKVHVSGHASEGELLYCYNIVEPEFVMPVHGETRHLIANGRIAEKTGVPAEN
+VILAGNGTVVDMTDGLVKVVGEVECGYVYVDGSSVGEISDSDLKDRRVLGEEGFLSIITV
+VNRQTGAIVSGPDVHARGVAEDEKVFEEIKPKIVRALEEAVQSSKDHTAHQLQQVVRRTV
+GTWVNRKLRRRPMIIPVVLEA
+>2_447
+MTRSSRNSSSRRRGGGQSRRPRSSGAPGQLAKGGLRITPLGGLGEIGRNMTVFEHQGKLL
+IVDCGVLFPEDHQPGIDVILPDFTSIRDRLQDVVGVVLTHGHEDHIGGVPYLLKERPDIP
+LIGSELTLAFIEAKLKEHKIVPKTHMVVAEDKRHMGPFELEFVAVNHSIPDALAVAIRTE
+AGLILHTGDFKMDQFPLDRRITDLRHFARLGEEGVDVFLTDSTNAEVPGFTISERELTPA
+IDHVFRTAPKRIIVSSFASHVHRIQQVLDAAHASGRKVAFVGRSMVRNMGIAGDLGYLKI
+PKGLVVDFKKLQDMPDEKIALISTGSQGEPMAALGRMANQTHQIKLNKGDTVLLASSVVP
+GNETSITGIINKFTDMGVNVVHKGNAKVHVSGHASAGELVYCYNIVQPRNVMPVHGEAAH
+LHANAELAKKTGLPEDRVFITKDGDVLDLVDGRVSVAGKVEAGLVYVDGDTIGKVTEGTL
+EERRTMQEAGVVTVVAIVDPDTNQLAEPLEFMTKGFIQDASVFKGAAEKVKSALSRSNVQ
+DIDDIEKLERVIGDAVTRHLERAYRRAPLVTVVVVDA
+>3_414
+MTAGTRLSTPPKLKRGTCRIVQLGGLEEVGRNMVTFEIDGKILIVDCGVLFPEEHQPGVD
+LILPDFDYIRDRVDDVVGIVLTHGHEDHIGAVPYLLRLRDDIPVIGSKLTLALIEAKLEE
+HRIKPRTRVVKEDDIVEFGPFECEFVAVNHSIPDALAVAIHTDAGTILHTGDFKMDQLPL
+DGRITDLRAFARLGEEGVDLFMTDSTNAEVPGFTTTEAEIGPTLERYFATAKRRIVVASF
+SSHVHRVQQVLDAAHKHGRKVAFGGRSMIRNMTIAAKLGYLNVPNGILVDIRKVDKYRDD
+EIVLMVTGSQGEPMAALSRMANGDHQVQLEEGDLVVLASSLIPGNENSVFRVINGLMKLG
+ATVVHKGMAKVHVSGHASEGELLYCYNIVEPEFVMPVHGETRHLIANGRIAEKTGVPAEN
+VILAGNGTVVDMTDGLVKVVGEVECGYVYVDGSSVGEISDSDLKDRRVLGEEGFISIITV
+VNRQTGAIVSGPDVHARGVAEDEKVFEEIKPKIVRALEEAVQSSKDHTAHQLQQVVRRTV
+GTWVNRKLRRRPMIIPVVLEA
+>4_638
+MTAGTRLSTPPKLKRGTCRIVQLGGLEEVGRNMVTFEIDGKILIVDCGVLFPEEHQPGVD
+LILPDFDYIRDRVDDVVGIVLTHGHEDHIGAVPYLLRLRDDIPVIGSKLTLALIEAKLEE
+HRITPRTRVVKEDDIVEFGPFECEFVAVNHSIPDALAVAIHTDAGTILHTGDFKMDQLPL
+DGRITDLRAFARLGEEGVDLFMTDSTNAEVPGFTTTEAEIGPTLERYFATAKRRIVVASF
+SSHVHRVQQVLDAAHKHGRKVAFGGRSMIRNMTIAAKLGYLNVPNGILVDIRKVDKYRDD
+EIVLMVTGSQGEPMAALSRMANGDHQVQLEEGDLVVLASSLIPGNENSVFRVINGLMKLG
+ATVVHKGMAKVHVSGHASEGELLYCYNIVEPEFVMPVHGETRHLIANGRIAEKTGVPAEN
+VILAGNGTVVDMTDGLVKVVGEVECGYVYVDGSSVGEISDSDLKDRRVLGEEGFLSIITV
+VNRQTGTIVSGPDVHARGVAEDEKVFEEIKPKIVRALEEAVQSSKDHTAHQLQQVVRRTA
+GTWVNRKLRRRPMIIPVVLEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001545.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001545.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4ce5b09274ba7805dee4ad14797bf01d65cca1d1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001545.fa
@@ -0,0 +1,20 @@
+>0_2214
+MADRAPRPAEQTVADPAEHAARARRSTLMSKLWVGFVSLLVLFFASFAVYVAVAFIRAPQ
+LLAKGIGVGVIFVVLVTVAVLAREVWFGQQTERLADLLEAEGGLPEDDLPRSPGGRIDRA
+AADAQFEVYRVEAEAAPRDWRTRYRLALAYDASGDRRRAREAAREAVRLHRQG
+>1_665
+MDWTDTWTLAEPSRTPDDGAVGPPAPAVRARRSTVMSKVWVGFVCLLVLLFAGFALNASV
+ALVRAPQPLAKAIGAGVILVVLVTVAVLAREVWFGRQTERLADQLEAEGGLPEDDLPRSP
+GGRIDREAADAQFELYRVEAEAAPRDWRARYRLALAYDASGDRRRAREAAREAVRLHRAG
+>2_2081
+MASTDPRPGVDREQAPRAGSSTGAKLWVLFVAALTLFFAFFVVRAAVVFIAAGGVLPAVI
+GVAVILVVLVGLGLLGREMLFGLQTERLARTLEAEGGLPADDLPRSPGGRIDRDAADAAF
+ADAADEVRAAPEDWRARYRLSLAYDAAGDRRRAREAARQAISLASRRG
+>3_411
+MAEPSRTPDDGAVGPTEHAARARRSTVMSKVWVGFVSLLVLLFAGFALNASVALVRAPQP
+LAKAIGAGVILVVLVTVAVLAREVWFGRQTERLADQLEAEGGLPEDDLPRSPGGRIDREA
+ADAQFELYRVEAEAAPRDWRARYRLALAYDASGDRRRAREAAREAVRLHRAG
+>4_635
+MAEPSRTPDDGAVGPTEHAARARRSTVMSKVWVGFVSLLVLLFAGFALNASVALVRAPQP
+LAKAIGVGVILVVLVTVAVLAREVWFGRQTERLADQLEAEGGLPEDDLPRSPGGRIDREA
+ADAQFELYRVEAEAAPRDWRARYRLALAYDASGDRRRAREAAREAVRLHRAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001546.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001546.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2ac531572cb65410fc5e0c3710e7c5cf83d2ca26
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001546.fa
@@ -0,0 +1,30 @@
+>0_2215
+MTDAPAPSAVPADDAVPRVAILGAGGKMGRHAVPAVREAAALELVAELGSADPLEAILDA
+GATHVLDLTVPDVSPRNAAFAVEHGLHTVIGTSGWGPERREALAAQLAEHPGVGVLIAPN
+FSVGSVLASAFAAKAARFFESVELIEMHHPAKLDAPSGTAVRTAELIGQARREAGVPPSP
+DATERDPDGSRGAVVDGVHVHAVRLRGLEAHQEVLLGGPGEQLVVRHDAFDRGAYMPGIV
+LGLRTVASRPGLTYGLDGYLDLG
+>1_664
+MTETRTPSAVSAPDDVPRVAILGARGRMGRHAVPAVRAAEGLELVAELGSQDRLDAVLDA
+GATHVLDLTVPDASPENVAFAVEHGLHTVVGTSGWVPERRERLEAQLAEHPGVGVLIAPN
+FSVGSVLASAFAAQAARYFESVELVELHHPDKVDAPSGTAVRTAELIGAARDAAGVPVSP
+DATEHDPDGARGAVVHGVHVHAVRLRGLEAHQEVLLGGPGEQLVVRHDAFDRGAYMPGVV
+LGLRTVASRPGLTYGLDGYLDLG
+>2_2082
+MTETTPRTPVPGDATPRVAILGASGKMGRHAVPAVRAAQGLELVAELGSGDPLQAVLDAG
+ATHVLDLTVPDASPENVAFAVEHGLHVVVGTSGWGAERRAALEERLAARPGVGVLIAPNF
+SVGSVLASAFAARAARWFESVEVVELHHPAKLDAPSGTAVRTAEMIAASRAEAGVGPSPD
+ATERDPDGARGAVVDGVHVHAVRLRGLEAHQEVLLGGPGEQLTVRHDAFDRQAYMPGVVL
+ALREVAGRPGLTYGLDAVLGLD
+>3_410
+MTETRTPSAVSAPDDVPRVAILGARGRMGRHAVPAVRAAEGLELVAELGSQDRLDAVLDA
+GATHVLDLTVPDASPENVAFAVEHGLHTVVGTSGWVPERRERLEAQLAEHPGVGVLIAPN
+FSVGSVLASAFAAQAARYFESVELVELHHPDKVDAPSGTAVRTAELIGAARDAAGVPVSP
+DATEHDPDGARGAVVHGVHVHAVRLRGLEAHQEVLLGGPGEQLVVRHDAFDRGAYMPGVV
+LGLRTVASRPGLTYGLDGYLDLG
+>4_634
+MTETRTPSAVSAPDDVPRVAILGARGRMGRHAVPAVRAAEGLELVAELGSQDRLDAVLDA
+GATHVLDLTVPDASPENVAFAVEHGLHTVVGTSGWVPERRERLEAQLAEHPGVGVLIAPN
+FSVGSVLASAFAAQAARYFESVELVELHHPDKVDAPSGTAVRTAELIGAARDAAGVPVSP
+DATEHDPDGARGAVVHGVHVHAVRLRGLEAHQEVLLGGPGEQLVVRHDAFDRGAYMPGVV
+LGLRTVASRPGLTYGLDGYLDLG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001556.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001556.fa
new file mode 100644
index 0000000000000000000000000000000000000000..687c98217bbde2b79551fe198e523ccf2200ee1c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001556.fa
@@ -0,0 +1,20 @@
+>0_2233
+MADPARAGRLAQRIKVLVAEALRRSVKDDRVEAVTVTEVRVTNDLQHATVYYTVLGDEAT
+AAAAHEGIQENRGVLRREVGRGLTIRLVPTLEFVADTVPEAAAHLEDVLRAAKERDAELA
+KAREGATYAGEADPYRTSEPGSEADDAPRA
+>1_654
+MADPARAGRLAQRIKVLVAEALRRGVKDDRVEPVTVTEVRVTNDLQHATVYYTVLGDEAT
+VAAAHEGIQDNRGILRREVGRGLTIRLVPTLEFVADTVPEAAAHLEDVLRAAKERDAELA
+KAREGASYAGDADPYRTAEPDADADDAPRA
+>2_2093
+MADPARAGRLAQRIKVLVAEALRRAVKDERVEPVTVTEVRVTNDLQHATVYYTVLGDEAV
+VAAAQEAIQENRGVLRREVGRGLTIRLVPTLEFVADTVPEAAAHLEDVLRAAKERDAELA
+KAREGAQYAGDADPYRTSGDDDEQD
+>3_400
+MADPARAGRLAQRIKVLVAEALRRGVKDDRVEPVTVTEVRVTNDLQHATVYYTVLGDEAT
+VAAAHEGIQDNRGILRREVGRGLTIRLVPTLEFVADTVPEAAAHLEDVLRAAKERDAELA
+KAREGASYAGDADPYRTAEPDADADDAPRA
+>4_624
+MADPARAGRLAQRIKVLVAEALRRGVKDDRVEPVTVTEVRVTNDLQHATVYYTVLGDEAT
+VAAAHEGIQDNRGILRREVGRGLTIRLVPTLEFVADTVPEAAAHLEDVLRAAKERDAELA
+KAREGASYAGDADPYRSAEPDADADDAPRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001557.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001557.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cf401b0f2fdfd580005a0a77a35124a46ef23bf3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001557.fa
@@ -0,0 +1,81 @@
+>0_2234
+MMPKQITPAPAPARGGGRGRPGGGPGGGPGRPGGPGGRGGRGNAQGAFGRGGGARKGRKS
+KRAKRQEFEQAHTREIGGVKVPKGDGTTVLRLRRGASLADFAEKIRADVADLVKVLFTLG
+EMASANQSLDEDTFQLLGDELGYKVQIVSPEDEDKELLEAFDIDLEAEEANEDEADLEPR
+PAVVTVMGHVDHGKTRLLDAIRSSNVIEGEAGGITQHIGAYQVPVQHEGEDRRLTFIDTP
+GHEAFTAMRARGAKVTDIAVLVVAADDGVMPQTVEALNHAQSAGVPIVVAVNKIDKDTAQ
+PDKIRGQLTEYGLVPEEYGGDTMFVDVSARNGINIDQLLEAVLLTADAALELTANPSKDA
+RGVAVEANLDKGRGAVVTVLVQTGTLRVGDNMVVGSAHGRVRAMFDENGAPVEEADPSRP
+VQVLGLSSVPRAGDSFLVTEDDRTARQIAEKREAADRNAQLAKRRKRITLEDFDQAVAEG
+KLDTLNLIIKGDASGAVEALEDSLLKIEVGEDEVQLRVIHRGVGAITQNDVNLATVDDAI
+IIGFNVRPAERVADLADKEGVDMRFYSVIYDAIDDIENALKGMLKPEYEEVALGSAEVRE
+VFRSSKWGSIAGSLVRSGLIRRNAQARLVRDGAVVADNLKIESLRRFKDDATEVREGYEC
+GIGLGSFNDIKEGDVIETFEMREKPRA
+>1_653
+MAKVRVHELAKELGITSKEALSTLKDLGEFVSSASSTIEPPVVKKLRNAYPGAGKSAAKP
+GSTPAAPGRSAAPKPAAAPSPRAAAPTSNVGAPAPGPAAGRTAAPKPGAAPTPGPAAPTP
+AAPAEPKAPQPPATPGSAAPKPGAAAPKPGASAPKPGAPRPGNNPFSPKGGSAGPRPGAR
+PGGRGGAPRPGNNPFAPSQGMRSGREDRAPRPGGPRPPAGAGGPRPGGPRPAAGAGGPRP
+GGPRPNPGMMPKQITPAPQPARGRGRPGGGPGGGPGRPGGPGGRGGRGNAQGAFGRGGGP
+RKGRKSKRAKRQEFEQQHTREIGGVKVPKGDGTTVLRLRRGASLADFAEKIRADVADLVK
+VLFTLGEMASANQSLDEETFQLLGDELGYKVQIVSPEDEDKELLEAFDIDLEAEAANEDE
+ADLEPRPAVVTVMGHVDHGKTRLLDAIRSSNVIEGEAGGITQHIGAYQVPVEHEGEQRRL
+TFIDTPGHEAFTAMRARGAKVTDIAVLVVAADDGVMPQTVEALNHAQSAGVPIVVAVNKI
+DKDTAAPDKIRGQLTEYGLVPEEYGGDTMFVDVSARNNINIDQLLEAILLTADAALELTA
+NPHKAARGVAIEANLDKGRGAVVTVLVQTGTLRVGDTMVVGSAHGRVRAMFDENGNAVEA
+ADPSRPVQVLGLSTVPRAGDSFLVTDDERTARQIAEKREAADRNAQLAKRRKRITLEDFD
+QAVAEGKLDTLNLIIKGDASGAVEALEDSLLKIEVGEDEVQLRVIHRGVGAITQNDVNLA
+TVDNAIIIGFNVRPAERVADLADREGVDMRFYSVIYDAIDDIENALKGMLKPEYEEVELG
+SAEVREVFRSSKWGNIAGSLVRSGLIRRNAQARLVRDGVVVSDHLKIESLRRFKDDATEV
+REGYECGIGLGSFNDIKEGDVIETFEMQEKPRV
+>2_2094
+MAKVRVHELAKELGITSKEALSTLKDLGEFVSSASSTIEPPVVKKLRGAYPGAGAKGSAK
+PAAAAPAAPKPAGGSAPSPAAAKPAAASAPGASAPKPGSAAPQPGSAAPKPGGSAPKPGA
+SAPAPAAQKSAPAAPKAPAAPAPQAPAPKPGASAPKPGASAPKPGGAKPAPRPGNNPFTS
+KAGSAGPRPGGGRSGGPRPGNNPFAPSQGMRSGREDRAPRPGGPRPAAGAGGPRPGGPRP
+AAAGAGGPRPGGPRPNPGMMPKHITPAATPARGGGRGRPGAGGPGGGPGRPGGGPAGRGG
+GRGNAQGAFGRGGGARKGRKSKRAKRQEFEQQHTREIGGVKVLKGDGTTVVRLRRGASLA
+DFAEKIHADVADLVKVLFTLGEMASANQSLDEETFQLLGGELGYVVQIVSPEDEDKELLE
+AFDIDLEAEAAGEDEADLQPRPAVVTVMGHVDHGKTRLLDAIRSSNVTAGEAGGITQHIG
+AYQVPVEHEGSERRLTFIDTPGHEAFTAMRARGAKVTDIAVLVVAADDGVMPQTVEALNH
+AQSAGVPIVVAVNKIDKDSAQPDKIRGQLTEYGLIPEEYGGDTMFVDVSARNNLHIDDLL
+EAILLTADAALELSANPDKAARGVAIEANLDKGRGAVVTVLVQTGTLRVGDTMVVGSAHG
+RVRAMFDENGTPVEEATPSRPVQVLGLSSVPRAGDSFLVTDDERTARQIAEKREAADRNA
+QLAKRRKRITLEDFDQAVAEGKLDTLNLIIKGDASGAVEALEDSLLKIEVGEDEVQLRVI
+HRGVGAITQNDVNLATVDNAIIIGFNVRPAERVADLADKEGVDMRFYSVIYDAIDDIENA
+LKGMLKPEYEEVQLGSAEVREVFRSSKWGAIAGSLVRSGLIRRNAQARLVRDGAVVSENL
+KIESLRRFKDDATEVREGYECGIGLGNFNDIKEGDVIETFEMQEKPRV
+>3_399
+MAKVRVHELAKELGITSKEALSTLKDLGEFVSSASSTIEPPVVKKLRNAYPGAGKSAAKP
+GSTPAAPGRSAAPKPAAAPSPRAAAPTSNAGAPAPGPAAGRTAAPKPGAAPTPGPAAPTP
+AAPAEPKAPQPPATPGSAVPKPGAAAPKPGASAPKPGAPRPGNNPFSPKGGSAGPRPGAR
+PGGRGGAPRPGNNPFAPSQGMRSGREDRAPRPGGPRPPAGAGGPRPGGPRPAAGAGGPRP
+GGPRPNPGMMPKQITPAPQPARGRGRPGGGPGGGPGRPGGPGGRGGRGNAQGAFGRGGGP
+RRGRKSKRAKRQEFEQQHTREIGGVKVPKGDGTTVLRLRRGASLADFAEKIRADVADLVK
+VLFTLGEMASANQSLDEETFQLLGDELGYKVQIVSPEDEDKELLEAFDIDLEAEAANEDE
+ADLEPRPAVVTVMGHVDHGKTRLLDAIRSSNVIEGEAGGITQHIGAYQVPVEHEGEQRRL
+TFIDTPGHEAFTAMRARGAKVTDIAVLVVAADDGVMPQTVEALNHAQSAGVPIVVAVNKI
+DKDTAAPDKIRGQLTEYGLVPEEYGGDTMFVDVSARNNINIDQLLEAILLTADAALELTA
+NPHKAARGVAIEANLDKGRGAVVTVLVQTGTLRVGDTMVVGSAHGRVRAMFDENGNAVEA
+ADPSRPVQVLGLSAVPRAGDSFLVTDDERTARQIAEKREAADRNAQLAKRRKRITLEDFD
+QAVAEGKLDTLNLIIKGDASGAVEALEDSLLKIEVGEDEVQLRVIHRGVGAITQNDVNLA
+TVDNAIIIGFNVRPAERVADLADREGVDMRFYSVIYDAIDDIENALKGMLKPEYEEVELG
+SAEVREVFRSSKWGNIAGSLVRSGLIRRNAQARLVRDGVVVSEHLKIESLRRFKDDATEV
+REGYECGIGLGSFNDIKEGDVIETFEMQEKPRV
+>4_623
+MAKVRVHELAKELGITSKEALSTLKDLGEFVSSASSTIEPPVVKKLRNAYPGAGKSAAKP
+GSTPAAPGRSAAPKPAAAPSPRAAAPTSNAGAPAPGPAAGRTAAPKPGAAPTPGPAAPTP
+AAPAEPKAPQPPATPGSAAPKPGAAAPKPGASAPKPGAPRPGNNPFSPKGGSAGPRPGAR
+PGGRGGAPRPGNNPFAPSQGMRSGREDRAPRPGGPRPPAGAGGPRPGGPRPAAGAGGPRP
+GGPRPNPGMMPKQITPAPQPARGRGRPGGGPGGGPGRPGGPGGRGGRGNAQGAFGRGGGP
+RKGRKSKRAKRQEFEQQHTREIGGVKVPKGDGTTVLRLRRGASLADFAEKIRADVADLVK
+VLFTLGEMASANQSLDEETFQLLGDELGYKVQIVSPEDEDKELLEAFDIDLEAEAANEDE
+ADLEPRPAVVTVMGHVDHGKTRLLDAIRSSNVIEGEAGGITQHIGAYQVPVEHEGEQRRL
+TFIDTPGHEAFTAMRARGAKVTDIAVLVVAADDGVMPQTVEALNHAQSAGVPIVVAVNKI
+DKDTAAPDKIRGQLTEYGLVPEEYGGDTMFVDVSARNNINIDQLLEAILLTADAALELTA
+NPHKAARGVAIEANLDKGRGAVVTVLVQTGTLRVGDTMVVGSAHGRVRAMFDENGNAVEA
+ADPSRPVQVLGLSAVPRAGDSFLVTDDERTARQIAEKREAADRNAQLAKRRKRITLEDFD
+QAVAEGKLDTLNLIIKGDASGAVEALEDSLLKIEVGEDEVQLRVIHRGVGAITQNDVNLA
+TVDNAIIIGFNVRPAERVADLADREGVDMRFYSVIYDAIDDIENALKGMLKPEYEEVELG
+SAEVREVFRSSKWGNIAGSLVRSGLIRRNAQARLVRDGVVVSDHLKIESLRRFKDDATEV
+REGYECGIGLGSFNDIKEGDVIETFEMQEKPRV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001558.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001558.fa
new file mode 100644
index 0000000000000000000000000000000000000000..66d4e64af70f8860c8265ae9ca383663613a436f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001558.fa
@@ -0,0 +1,35 @@
+>0_2235
+MSALRMLEAEREIPMDRLIPTIEQALLMAYHRTPGALKRARVEIDRVSGHVTVWATELDE
+DGTPIGEFDDTPNGFGRVAASTARQVMIQRMREEDDDKVLGEFKDKEGELVSGLIQQGVN
+RHMIQVNLGTLEAVLPPPEQVPGEDYSHGRRLRAYVVSATRGNKGPSVTVSRSHPGLVRK
+LFELEVPEIADGSVEITALAREAGHRTKMAVRATRPGVNAKGASIGEMGSRVRAVMTELN
+DEKIDIVEHAEDPAQMIANALSPAKTVSVEVLDADQHSARAVVPEHQLSLAIGKEGQNAR
+LAAKLTGWRIDIVGDGSDASAPAR
+>1_651
+MSALRMLEAEREIPMDRLIPTIEQALLMAYHRTPGALKRARVEIDRATGHVTVWATELDE
+DDTPIGEFDDTPNGFGRVAASTARQVMIQRMREEDDDKVLGEFKDKEGELVSGVIQQGLN
+RHMVQVNLGTLEAVLPPPEQVPGEDYAHGRRIRAYVVSATRGAKGPSVTVSRSHPGLVRK
+LFELEVPEIADGSVEITALAREAGHRTKMAVRATRPGVNAKGASIGEMGSRVRAVMTELN
+DEKIDIVDHVDDPAAMIANALSPATTVSVEILDADQHSARAVVPEYQLSLAIGKEGQNAR
+LAAKLTGWRIDIVGDGVTTSAPGR
+>2_2096
+MSALRMLVAERDIPLDRLVPAIEQALLIAYHRTPGAIKGSRVELDRSTGHVTVWAPEVED
+DGTCVGEFDDTPNGFGRIAASTARQVIFQRLRDADDAKVLGEFKDREGELVSGVIQQGSH
+RHMVQVDLGSLEAVLPPPEQVPGEDYRHGRRIRAVIVSATRGPKGPSVTLSRSHPNLVRR
+LFALEVPEIADGTVEITALAREAGHRTKMAVKATRPGVNPKGAAIGEMGSRVRAVMTELG
+GEKIDIVEHADDPAEMIKHALSPAQALSVEILDADQHSARAVVPQHQLSLAIGKEGQNAR
+LAARLTGWRIDIVGDAAQQPGADAAQQPGADAASEMAPATEAGAEA
+>3_397
+MSALRMLEAEREIPMDRLIPTIEQALLMAYHRTPGALKRARVEIDRATGHVTVWATELDE
+DDTPIGEFDDTPNGFGRVAASTARQVMIQRMREEDDDKVLGEFKDKEGELVSGVIQQGLN
+RHMVQVNLGTLEAVLPPPEQVPGEDYAHGRRIRAYVVSATRGAKGPSVTVSRSHPGLVRK
+LFELEVPEIADGSVEITALAREAGHRTKMAVRATRPGVNAKGASIGEMGSRVRAVMTELN
+DEKIDIVDHVDDPAAMIANALSPATTVSVEILDADQHSARAVVPEYQLSLAIGKEGQNAR
+LAAKLTGWRIDIVGDGVTTSAPGR
+>4_621
+MSALRMLEAEREIPMDRLIPTIEQALLMAYHRTPGALKRARVEIDRATGHVTVWATELDE
+DDTPIGEFDDTPNGFGRVAASTARQVMIQRMREEDDDKVLGEFKDKEGELVSGVIQQGLN
+RHMVQVNLGTLEAVLPPPEQVPGEDYAHGRRIRAYVVSATRGAKGPSVTVSRSHPGLVRK
+LFELEVPEIADGSVEITALAREAGHRTKMAVRATRPGVNAKGASIGEMGSRVRAVMTELN
+DEKIDIVDHVDDPAAMIANALSPATTVSVEILDADQHSARAVVPEYQLSLAIGKEGQNAR
+LAAKLTGWRIDIVGDGVTTSAPGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001559.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001559.fa
new file mode 100644
index 0000000000000000000000000000000000000000..50c82e577ce69775a9a22c46eb17c2d16034c735
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001559.fa
@@ -0,0 +1,25 @@
+>0_2236
+MDSTDRHDDAASLRARVEEALASADVVVEEVRVAGAAAHPTVEVVVDRASGTEGLSLDEL
+AGLSGRVSAALDALGDHVPGVGAGEYLLELTTAGVDRPLTQPRHFARNVGRLVEVAVDGG
+EPFTARLLAADEDAVELAEVRPGAKKGMKAKELPAQRVELARLGPAVVQVEWTPAQQAAD
+AAAAGEQTAEHTEA
+>1_650
+MDSTDRRDDLAELRTRVEEALAADDVVVEQVRATGTAEHRTVEVVLDRASGTQGLSLDDV
+ARLSGRVSAALDALGDHVPGVGAGEYLLEVTTAGVDRPLTEPRHFARNVGRLVEVSVDGA
+APVTARLKDVTDDDVELAVVRPPAKKGMKAKELPAERVALDRLGPAIVQVEWSPAQQAGD
+ADAAAGEDTAEHTEA
+>2_2097
+METVPAALTELVEGAVSHRGVVVESVRVAGAADAPTVEVVLDRLEGTEGLSLDEVAELSG
+LVSDALDACGDEVPGVGAGEYLLEVSTAGVDRPLTGPRHWLRNVGRLVEVSIDAALPVTA
+RVLGVEASGVELEVVRPGAKKGMPAKVLPAEHVDFSRLGPGQVQVEWSTAAEQSGAEQTA
+EQTEA
+>3_396
+MDSTDRRDDLAELRTRVEEALAADDVVVEQVRATGTAEHRTVEVVLDRASGTQGLSLDDV
+ARLSGRVSAALDALGDHVPGVGAGEYLLEVTTAGVDRPLTEPRHFARNVGRLVEVSVDGA
+APVTARLKDVTDDDVELAVVRPPAKKGMKAKELPAERVALDRLGPAIVQVEWSPAQQAGD
+ADAAAGEDTAEHTEA
+>4_620
+MDSTDRRDDLAELRTRVEEALAADDVVVEQVRATGAAEHRTVEVVLDRASGTQGLSLDDV
+ARLSGRVSAALDALGDHVPGVGAGEYLLEVTTAGVDRPLTEPRHFARNVGRLVEVSIDGA
+APVTARLKDVTDDDVELAVVRPPAKKGMKAKELPAERVALDRLGPAIVQVEWSPAQQAGD
+ADAAAGEDTAEHTEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001562.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001562.fa
new file mode 100644
index 0000000000000000000000000000000000000000..62b8399c8fc45bc136eed8422bf6d813bb197bdc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001562.fa
@@ -0,0 +1,34 @@
+>0_2239
+MTRLPPVPRWSPSTDRQVRAATGGRVRLLTDADTPALAALSARAPVSNVFVDSLLEAGRL
+AGPRGGAAGTLFLGIDAGEGRDDDGAPVAGLRAALWVGSNVVPVAAAETPDAGWAPGDAE
+ALGAAAVALRRRYGSLYGPAEPVLAVGSALAAAGHRARSVREDQPLLVLGADGAAETSPH
+VVQAHPRDFERVLPASAAMFEEELGFSPFLGGAAQYRDRVERLIRAGRVFIDPGPADAGG
+PLRFKADIGLLSSRCAQIQGVWMAPAARGRGLAAAAMAAVVEYVRLQAPVVSLYVNAYNT
+PALRTYERVGFERRGTFATVLY
+>1_647
+MTRLPPVPRWSPSTDREVRAATGDRVRLLTDADTAALAALSARAPVSNVFVDSLLEAGRL
+AGPRGGAAGTLFLGIDDDAPGAGALRAAVWIGSNVVPVAASEAPDAGWAPGDAEALGAAA
+AALRRRYGSIYGPAGPVLAAGEALAAAGHRSRSVRPDQPLLVLGTAGGIDPNPHVVQAQP
+HDFARVLPASAAMFEEELGFSPFAGGAAQYRDRVERLIHTGRVFIDPGPRDAGGPLRFKA
+DIGLLSSRCAQIQGVWMAPAARGRGLAASAMAAVVDYVRLQAPVVSLYVNAYNTPALRTY
+ERVGFERRGTFATVLY
+>2_2100
+MDLAAASDGRVRVLTDADTPALTALAAADPVANVHAASLLEAGRLAGPRGGRADGTLFLG
+VEDPDRPGALRSACWVGSTVVPLAGHDDDVPALAASVAALRRRFASVYGPAVTVLAVGRT
+LRDAGHRPRAVREEQPLMVHARTPGDLVPDPAVRAAAPGEWESVVPASAAMFEEELGFSP
+FLTGAAQYRDRVRRLVADGRVFTAPGEPVVDDPTSGVRFKADIGLLSASCVQVQGVWLHP
+SRRGRGEAAPAMAAAVALMARRAPAVSLYVNGFNTPALRTYERVGFERVGTFATVLY
+>3_393
+MTRLPPVPRWSPSTDREVRAATGDRVRLLTDADTAALAALSARAPVSNVFVDSLLEAGRL
+AGPRGGAAGTLFLGIDDDAPGAGALRAAVWIGSNVVPVAASEAPDAGWAPGDAEALGAAA
+AALRRRYGSIYGPAGPVLAAGEALAAAGHRSRSVRPDQPLLVLGTAGGIDPNPHVVQAQP
+HDFARVLPASAAMFEEELGFSPFAGGAAQYRDRVERLIHAGRVFIDPGPRDAGGPLRFKA
+DIGLLSSRCAQIQGVWMAPAARGRGLAASAMAAVVDYVRLQAPVVSLYVNAYNTPALRTY
+ERVGFERRGTFATVLY
+>4_617
+MTRLPPVPRWSPSTDREVRAATGDRVRLLTDADTAALAALSARAPVSNVFVDSLLEAGRL
+AGPRGGAAGTLFLGIDDDAPGAGGLRAAVWIGSNVVPVAASEAPDAGWAPGDAEALGAAA
+AALRRRYGSIYGPAGPVLAAGEALAAAGHRSRSVRPDQPLLVLGTAGGIDPNPSVVQAQP
+RDFARVLPASAAMFEEELGFSPFAGGAAQYRDRVERLIQAGRVFIDPGPRDAGGPLRFKA
+DIGLLSSRCAQIQGVWMAPAARGRGLAVSAMAAVVDYVRLQAPVVSLYVNAYNTPALRTY
+ERVGFERRGTFATVLY
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001563.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001563.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7c268501efadce965f513edcc9869d83742f3918
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001563.fa
@@ -0,0 +1,40 @@
+>0_2240
+MPVSLGMPSAPPPVLAPRRATRQIRVGSVGVGSQHQVSVQSMTTTKTHDIGATLQQIAEL
+TAAGCDIVRVACPTDKDAEALKVIAQQSTIPVIADIHFQPKYVFAAIEAGCGAVRVNPGN
+IKKFDDKVKEIAQAAAEHGTSIRIGVNAGSLDPRLLKKHGKATPEALVESAVWEASLFEE
+HGFKDFKISVKHNDPVIMARAYELLAEQGDWPLHLGVTEAGPAFQGTIKSATAFGYLLGK
+GIGDTIRVSLSAPPVEEVKVGLQILQSLNLRERKLEIVSCPSCGRAQVDVYTLAEEVTEG
+LKDLEVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIRTVPEDQIVDTLIE
+EANRIAAEMGVGEESGDQAAAGAPVVSVH
+>1_646
+MPVSLGMPSAPPPVLAPRRTTRQIQVGSVGVGSQHPVSVQSMTTTKTHDIGATLQQIAEL
+TAAGCDIVRVACPTDKDAEALKVIAQQSTIPVIADIHFQPKYVFAAIEAGCGAVRVNPGN
+IKKFDDKVKEIAQAASDHGTSLRIGVNAGSLDPRLLQKYGKATPEALVESAVWEASLFEE
+HGFKDFKISVKHNDPVIIARAYELLAEQGDWPLHLGVTEAGPAFQGTIKSATAFGYLLGQ
+GIGDTIRVSLSAPPVEEVKVGLQILQSLNLRERKLEIVSCPSCGRAQVDVYTLAEQVTEG
+LQDLEVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIRTVPEDQIVETLIE
+EANRIAGEMDLGEDGGDQAAAGAPVVSVH
+>2_2101
+MPVSLGMPSAPPPVLAPRRRTRQIQVGRVGVGSEHPVSVQSMTTTKTHDIGATLQQIAEL
+TAAGCDIVRVACPTDKDADALKVIAQQSTIPVIADIHFQPKYVFAAIEAGCGAVRVNPGN
+IKKFDDKVKEIAQAATEHGTSLRIGVNAGSLDPRLLQKHGKATPEALVESAVWEASLFEE
+HGFKDFKISVKHNDPVIMARAYELLAEQGDWPLHLGVTEAGPAFQGTIKSATAFGYLLGK
+GIGDTIRVSLSAPPVEEVKVGLQILQSLNLRERKLEIVSCPSCGRAQVDVYTLAEQVTEG
+LKDVTVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIRTVPEDQIVDTLIE
+EARRIAAEMGHEDGEGEAAPAGAPSVTVH
+>3_392
+MPVSLGMPSAPPPVLAPRRTTRQIQVGSVGVGSQHPVSVQSMTTTKTHDIGATLQQIAEL
+TAAGCDIVRVACPTDKDAEALKVIAQQSTIPVIADIHFQPKYVFAAIEAGCGAVRVNPGN
+IKKFDDKVKEIAQAASDHGTSLRIGVNAGSLDPRLLQKYGKATPEALVESAVWEASLFEE
+HGFKDFKISVKHNDPVIMARAYELLAEQGDWPLHLGVTEAGPAFQGTIKSATAFGYLLGQ
+GIGDTIRVSLSAPPVEEVKVGLQILQSLNLRERKLEIVSCPSCGRAQVDVYTLAEQVTEG
+LQDLEVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIRTVPEDQIVETLIE
+EANRIAGEMDLGEDGGDQAAAGAPVVSVH
+>4_616
+MPVSLGMPSAPPPVLAPRRTTRQIQVGSVGVGSQHPVSVQSMTTTKTHDIGATLQQIAEL
+TAAGCDIVRVACPTDKDAEALKVIAQQSTIPVIADIHFQPKYVFAAIEAGCGAVRVNPGN
+IKKFDDKVKEIAQAASDHGTSLRIGVNAGSLDPRLLQKYGKATPEALVESAVWEASLFEE
+HGFKDFKISVKHNDPVIMARAYELLAEQGDWPLHLGVTEAGPAFQGTIKSATAFGYLLGQ
+GIGDTIRVSLSAPPVEEVKVGLQILQSLNLRERKLEIVSCPSCGRAQVDVYTLAEQVTEG
+LQDLEVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIRTVPEDQIVETLIE
+EANRIAGEMDLGEDGGDQAAAGAPVVSVH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001572.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001572.fa
new file mode 100644
index 0000000000000000000000000000000000000000..200f3d5cd5b3cf813ec3a4bfe4c81e76574296a5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001572.fa
@@ -0,0 +1,40 @@
+>0_2255
+MTLVDHTRPAGGEAATSPPPGEPAEAPMLQVLDAEGRRHAQPELDPWIEDVDADALAALY
+RQMAVVRRLDVEATHLQRQGELALWPPLLGQEAAQVGSAVALREDDFVFPSYRENGVALL
+RGVPALDLLRVWRGSTFSGWDPQATGVATQQIIIGAQALHAVGYAMGVQRDQADAATIVY
+FGDGATSQGDVNEAMVFSASYRSPVVFFCQNNHWAISEPVKLQTRRSIADRPWGFGIPSL
+RVDGNDVLAVLAATRAAVERAADGGGPTFIEAVTYRMGPHTTADDPTRYRDDAELEAWKA
+RDPLTRVEAHLRTLDVDVDAVLAQAQAEADELAAEVRRALESLVEDGAELLFDEIYAEPH
+QELERQRREHALYLQQFDDEEAGA
+>1_632
+MTLVDHTRPTGGQSAGSPPPAGPAEAVMLQVLDTEGRRRPQPELDPWIEDVDADALAALY
+RQMAVVRRLDVEATHLQRQGELALWPPLLGQEAAQVGSAVALRPDDFVFPSYRENGVALL
+RGVPALDLLRVWRGSTFSSWDPNETRVATQQIIIGAQALHAVGYAMGVQRDQADVATIVY
+FGDGATSQGDVNEAMVFSASYQSPVVFFCQNNHWAISEPVRLQTRRSIADRPWGFGIPSM
+RVDGNDVLAVLAATRAAVERAADGGGPTFIEAVTYRMGPHTTADDPTRYRDDAELEAWKA
+RDPLTRVEAHLRTLDVDVDAVLAQAQAEADELAAEVRRALEALEEDGADRLFDEIYAEPH
+QELERQRREHALYLQQFGDEEAGA
+>2_2110
+MTDVHLPEQDAPPRSDRPAEQLQVLTPDGRRSPSPELDPWLTDVDEEMLARLHRELTLVR
+RLDTEATHLQRQGRLALWPPLRGQEASQVGAAAALRPADHVFPSYRENGLCLLRGVEAGE
+LLRVWSGSSFSGWDPAATGVATQQLVIGAQTLHAVGYAMGVQRDAADVSTLVCFGDGATS
+EGDVHEAMVFAASYQAPVVFFCQNNHWAISEPVGLQARRSIADRAWGYGIPALRVDGNDV
+LAVLAAVRRGVDRAAAGAGPMFVEAVTYRMGAHTTADDPTRYQDPAELEAWARRDPLERL
+TAHLRDVGADADAVVDASEAAADDLAARMRADLDALPEEGPEALFAHVYAEPHQELARQQ
+RDLQLHLDGLDAGEEQA
+>3_378
+MTLVDHTRPTGGQSAGSPLPAGPAEAVMLQVLDTEGRRRPQPELDPWIEDVDADALAALY
+RQMAVVRRLDVEATHLQRQGELALWPPLLGQEAAQVGSAVALRPDDFVFPSYRENGVALL
+RGVPALDLLRVWRGSTFSSWDPNETRVATQQIIIGAQALHAVGYAMGVQRDQADVATIVY
+FGDGATSQGDVNEAMVFSASYQSPVVFFCQNNHWAISEPVRLQTRRSIADRPWGFGIPSM
+RVDGNDVLAVLAATRAAVERAADGGGPTFIEAVTYRMGPHTTADDPTRYRDDAELEAWKA
+RDPLTRVEAHLRTLDVDVDAVLAQAQAEADELAAEVRRALEALEEDGADRLFDEIYAEPH
+QELERQRREHALYLQQFDDEEAGA
+>4_602
+MTLVDHTRPTGGQSAGSPPPAGPAEAVMLQVLDAEGRRRPQPELDPWIEDVDADALAALY
+RQMAVVRRLDVEATHLQRQGELALWPPLLGQEAAQVGSAVALRPDDFVFPSYRENGVALL
+RGVPALDLLRVWRGSTFSSWDPNETRVATQQIIIGAQALHAVGYAMGVQRDQADVATIVY
+FGDGATSQGDVNEAMVFSASYQSPVVFFCQNNHWAISEPVRLQTRRSIADRPWGFGIPSM
+RVDGNDVLAVLAATRAAVERAADGGGPTFIEAVTYRMGPHTTADDPTRYRDDAELEAWKA
+RDPLTRVEAHLRTLDVDVDAVLAQAQAEADELAAEVRRALEALEEDGADRLFDEIYAEPH
+QELERQRREHALYLQQFDDEEAGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001573.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001573.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d4cbe378ef2f8a5d798c3cf918e0f475f6a0ad40
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001573.fa
@@ -0,0 +1,25 @@
+>0_2256
+MTTRRPQDAEPPFELVEQDEIGYETSHVDAFLARAREAREGGAPLTADEVRQARFATVNG
+GYATDEVDDELDRLEGELAAAEREAFVSERGDEDWSADLEERVAELVARADRAPAERFRR
+PSREDATSYDVDAVDALVDRLRVTLAGAEGAAAPDARGGLTADDVRRASFGEAEGDRGYE
+EGQVDAYLDAAVDVLLRRA
+>1_631
+MTPRTTPDAEPVFELVEQDEIGYETTHVDAFMARAREARDGGAPLTAEEVRQARFATVNG
+GYATDEVDDELDRLEEELAAAERQAFVAERGDEDWAADLEERVAELVARADRAPAERFRR
+PSRADAVSYDVDQVDALVDRLRVTLAGAEDSTDPGAEGGLTADDVRRASFGEAEGAAGYE
+EGQVDAYLDAAVDVLLRRA
+>2_2112
+MTPTSPEARADFEHVGPDEIGYEPAHVDAFLERARRAEAGEGDLTAEDVRQARFATVNGG
+YAADQVDDELDRLEEVLMGREREDAVGDGAWDRELAERSQELLGRADRAPAERFRRPSAD
+DAQSYDVDDVDALVDRLRATLTDGSDELTADDVRRAGFASAQGGDGYDEAQVDAYLDAAV
+DVLLRRG
+>3_377
+MTPRTTPDAEPVFELVEQDEIGYETTHVDAFMARAREARDGGAPLTAEEVRQARFATVNG
+GYATDEVDDELDRLEEELAAAERQAFVAERGDEDWAADLEERVAELVARADRAPAERFRR
+PSRADAVSYDVDQVDALVDRLRVTLAGAEDSTDPGAEGGLTADDVRRASFGEAEGAAGYE
+EGQVDAYLDAAVDVLLRRA
+>4_601
+MTPRTTPDTEPVFELVEQDEIGYETTHVDAFMARAREARDGGAPLTAEEVRQARFATVNG
+GYATDEVDDELDRLEEELAAAERQAFVAERGDEDWAADLEERVAELVARADRAPAERFRR
+PSRADAVSYDVDQVDALVDRLRVTLAGAEGSTDPDAEGGLTADDVRRASFGEAEGAAGYE
+EGQVDAYLDAAVDVLLRRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001574.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001574.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e7081f2bfa746fa6d06ec4944b43a3a775200d5c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001574.fa
@@ -0,0 +1,25 @@
+>0_2258
+MIQETLQSAEEQMDRTIEATREDFASVRTGRANPGLYSKVMVDYYGSYTPLQQLASFTTT
+DARTLLITPFDQSALRNIEKALSESEVGANPSNDGKVIRVVMPELTEERRKEYVKLVKSK
+AEEHKVSVRNARRKAKDALDKAVKDGEVGEDEGARGEKDLDAMTKKHVDLIEEMAKNKEQ
+ELLEV
+>1_629
+MIQETLQSAEEQMDRTIEATREDFASVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTT
+DARTLLITPFDQSALRNIEKALSESEVGANPSNDGKVIRIVMPELTEERRKEYVKLVKSK
+AEEHKISVRNARRKAKEAMDKAVKDGEVGEDEGARGEKELDALTKRHVELIDEMAKNKEQ
+ELLEV
+>2_2114
+MIQETLTSAQEQMERTIEATREDFASVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTT
+DARTLLITPFDVSALRNIEKALSDSEVGANPSNDGKVIRVVMPELTAERRKEYVKLVKNK
+AEEHKVSVRNARRKAKEAIDKLVKDKEIGEDEGARGEKDLDALTKKHTDLIEEMAKKKEA
+ELLEV
+>3_375
+MIQETLQSAEEQMDRTIEATREDFASVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTT
+DARTLLITPFDQSALRNIEKALSESEVGANPSNDGKVIRIVMPELTEERRKEYVKLVKSK
+AEEHKISVRNARRKAKEAMDKAVKDGEVGEDEGARGEKELDALTKRHVELIDEMAKNKEQ
+ELLEV
+>4_599
+MIQETLQSAEEQMDRTIEATREDFASVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTT
+DARTLLITPFDQSALRNIEKALSESEVGANPSNDGKVIRIVMPELTEERRKEYVKLVKSK
+AEEHKISVRNARRKAKEAMDKAVKDGEVGEDEGARGEKELDALTKRHVELIDEMAKNKEQ
+ELLEV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001575.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001575.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c71d9de7158bd1f6bbbcd77678b96411ef447fd5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001575.fa
@@ -0,0 +1,30 @@
+>0_2259
+METNRAPEDPKTAHVPQTSDDTGRRRVLLKLSGEVFGGGKVGVDPETVRGIAEQIAVAAD
+RVEIAIVVGGGNFFRGAELSENGMDRRRADYMGMLGTVMNCLALQDFLIQAGVSTRVQSA
+IHMEQVAESYIPLRAIRHMQKGRVVVFGAGTGLPYFSTDTVAAQRALEIGADEVLMAKSG
+VDGVYTADPKKDPSAELLTHLTYDEALLRNIRVMDLTAMTMCKDNNLDMRVFGMEGPGNV
+TRALLGEPIGTTVTV
+>1_628
+METNRAPEDPTTAHAPQTSDDTGRRRVLLKLSGEVFGGGKIGVDPETVRGIAEQIAAAAD
+QVEIAIVVGGGNFFRGAELSENGMDRRRADYMGMLGTVMNCLALQDFLIQAGVTTRVQSA
+IHMEQVAESYIPLRAIRHMQKGRVVIFGAGTGLPYFSTDTVAAQRALEVGADEVLMAKSG
+VDGVYTADPKKDPTAERLTHLTYDEALLRNIRVMDLTAMTMCKDNDLDMRVFGMEGPGNV
+TRALLGEPIGTTVTV
+>2_2115
+MSPAQQPENHAVDAEDTGRRRVLLKLSGEVFGGGSVGIDPVTVRGIAEQIAEAAEQVEIS
+IVVGGGNFFRGAELSESGMDRRRADYMGMLGTVMNCLALQDFLLQAGVSTRVQSAIHMEQ
+VAESYIPLRAVRHMQKGRVVVFGAGTGLPYFSTDTVAAQRALEIGADEVLMAKSGVDGVY
+TADPKKDPTAQRLEHLTYDEALRKDIRVMDLTAMTMCKDNGLSMRVFGMEGPGNVTRALL
+GEEIGTSVTP
+>3_374
+METNRAPEDPTTAHAPQTSDDTGRRRVLLKLSGEVFGGGKIGVDPETVRGIAEQIAAAAD
+QVEIAIVVGGGNFFRGAELSENGMDRRRADYMGMLGTVMNCLALQDFLIQAGVTTRVQSA
+IHMEQVAESYIPLRAIRHMQKGRVVIFGAGTGLPYFSTDTVAAQRALEVGADEVLMAKSG
+VDGVYTADPKKDPTAERLTHLTYDEALLRNIRVMDLTAMTMCKDNDLDMRVFGMEGPGNV
+TRALLGEPIGTTVTV
+>4_598
+METNRAPEDPTTAHAPQTSDDTGRRRVLLKLSGEVFGGGKIGVDPETVRGIAEQIAAAAD
+QVEIAIVVGGGNFFRGAELSENGMDRRRADYMGMLGTVMNCLALQDFLIQAGVTTRVQSA
+IHMEQVAESYIPLRAIRHMQKGRVVIFGAGTGLPYFSTDTVAAQRALEVGADEVLMAKSG
+VDGVYTADPKKDPTAERLTHLTYDEALLRNIRVMDLTAMTMCKDNDLDMRVFGMEGPGNV
+TRALLGEPIGTTVTV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001581.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001581.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cc2f2568c42ce0dab47948863393871305915053
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001581.fa
@@ -0,0 +1,35 @@
+>0_2267
+MSHQAPPADALKAGAPRPAVPVTPQTRASSLTDLLGAVVRLLPLQMKDELALAKGHVVAK
+GKKAGIGAGVTVVGLFFLALVVVALVVALIGAFADPTFWFPALMVAAAFLVLGAIFAGIG
+LFMVKGAMPLVPQETVRNLEYDLGYLKEGNAFDPAEYDRLKAERAEAKRVEAKRAEERRK
+VEKEENKKARKNGEAAPHPDRDEASEAEIRRRADLRRRHLGDIRSGLEEKTSVKGQLAAF
+AAQRKGRGVTPQTAHATDQTAPFTGAARAGEKAAEAEDYVKDNWQPLALLGASSAAFLAL
+AGRLRRR
+>1_620
+MSHQAPPADASKVRAPRTAVPVTPQTRASSLTDLLGAVVRLLPLQMKDELELAKRHVAAK
+GKKAGIGAGIAVVGLFFLALMVVALVVTLIGAFADPTFWFPALMVALAFLVLGLIFAGVG
+LMMVKGAMPLVPQEIVRNLEYDLGYLKEGNAFDPAEYDRLKAERAEAKRVEAAREAERKK
+VEKEENKKARKNGEAAPHPDRADASEAEIRRRADLRRRHLGDIRSGLDEKTSVKGQLAAF
+AAQRKGRGVTPETAHATEQTAPFTGAARAGERTAEAEDYVKDNWQPLALLGASSAAFVAL
+AGRLRRR
+>2_2125
+MSHAAPTAAPRAPRPTTPVTPQTRASSLTDLLAAVVRLLPLQLKDELALAKGQAAAKGKK
+AGIGAALAVVGLFFLALMTIALVVALIGAFANPPFWFPALMVALVFLVLGLVLAGVGAMQ
+IKGAMPLVPQETVRNLEYDLGYLKEGNDFDPAEYDRLKAERAEAKRLEKQREAERKKVEK
+EENKQARKDGLAAPHPAKDDASEDEVRRRAELRRRHLGDIRSGLDEKTSVKGQVAAFTAQ
+RKLRGTTPDTAHATEQTAPFTTAARAGEQTAAAEDYVKERWQPLALLGASGTAFAVLASR
+LRGRKG
+>3_366
+MSHQAPPADASKVRAPRTAVPVTPQTRASSLTDLLGAVVRLLPLQMKDELELAKRHVAAK
+GKKAGIGAGIAVVGLFFLALMVVALVVTLIGAFADPTFWFPALMVALAFLVLGLIFAGVG
+LMMVKGAMPLVPQEIVRNLEYDLGYLKEGNAFDPAEYDRLKAERAEAKRVEAAREAERKK
+VEKKENKKARKNGEAAPHPDRADASEAEIRRRADLRRRHLGDIRSGLDEKTSVKGQLAAF
+AAQRKGRGVTPETAHATEQTAPFTGAARAGERTAEAEDYVKDNWQPLALLGASSAAFVAL
+AGRLRRR
+>4_590
+MSHQAPPADASKARAPRTAVPVTPQTRASSLTDLLGAVVRLLPLQMKDELALAKGHVAAK
+GKKAGIGAGVAVVGLFFLALMVVALVVTLIGAFADPSFWFPALMVALAFLVLGLIFAGVG
+LVMVKGAMPLVPQETVRNLEYDLGYLKEGNAFDPAEYDRLKAERAEAKRVEAAREAERKK
+VEKEENKKARKNGEAAPHPDRDDATEAEIRRRADLRRRHLGDIRSGLDEKTNVKGQLAAF
+AAQRKGRGVTPETTHATEQTAPFTGAARAGERTAEAEDYVKDNWQPLALLGASSAAFVAL
+AGRLRRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001583.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001583.fa
new file mode 100644
index 0000000000000000000000000000000000000000..184b5c8e260079ee46e29d94764b38eb5c1e9cfa
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001583.fa
@@ -0,0 +1,36 @@
+>0_2270
+MDTTRLDDDLRAMLAEVESDRRGEPSDYLEDVAGQHVDGLAAAVCTVDGHQAAAGETDHA
+FALQSVSKALTYAVVLQEVGLDAVLERVGVEPSGEAFNHLSLHDDGRPYNPLINAGAIMA
+HALLPAGDHEERVALLVRRYSALAGAELEVSQDVLDAELTRADRNLGLAHLLADAGQLPV
+SAREAVAGYLAQCSVTVTAPQLAVMGATLAAGGTNPVTGERVLDEWVAQQTMSVMLTCGM
+YDATGQWVAEVGVPAKSGVSGALLGAVPGALGIATWSPRLDERGNSRRGIGIFEGLSARW
+DLHVLQHRGALRGLRASR
+>1_616
+MDTTRFDDDLRAMLGEVESDRRGEPSDYLEDVAGQHVDGLAVAVCTVDGHQAAAGETEHA
+FALQSVSKALTYAVVLQEIGLDHVLEDVGVEPSGESFNHLSLHDDGRPCNPLINAGAILV
+HSLLPAGDEDERTALLLRRYSALAGVELEVCEDVLDAERTRADRNLGLAHLLADAGRLPI
+SAREAVAGYLAQCSVLVTAPQLAVMGATLAAGGTNPVTGERVLDEWVAQQTMSVMLTCGM
+YDASGQWVAEVGVPAKSGVSGALLGAVPGALGLAAWSPRLDEQGNSRRGIGLFEGLSARW
+DLHVLQHRGALRGLSGPR
+>2_2132
+MGIGSLIATMLPSSIAFLPACTGMVIGWRWLGLPLGPNARSSAHRDRPGARPRPGRPSTT
+VTGMDTTRFDDDLRAMLGEVESDRRGEPSDYLEDVAGQHVDGLAVAVCTVDGHQAAAGET
+EHAFALQSVSKALTYAVVLQEIGLDHVLEDVGVEPSGESFNHLSLHDDGRPCNPLINAGA
+ILVHSLLPAGDEDERTALLLRRYSALAGVELEVCEDVLDAERTRADRNLGLAHLLADAGR
+LPISAREAVAGYLAQCSVLVTAPQLAVMGATLAAGGTNPVTGERVLDEWVAQQTMSVMLT
+CGMYDASGQWVAEVGVPAKSGVSGALLGAVPGALGLAAWSPRLDEQGNSRRGIGLFEGLS
+SRWDLHVLQHRGALRGLSGPR
+>3_362
+MDTTRFDDDLRAMLDEVESDRRGEPSDYLEDVAGQHVDGLAVAVCTVDGHQAAAGETEHA
+FALQSVSKALTYAVVLQEIGLDHVLEDVGVEPSGESFNHLSLHDDGRPCNPLINAGAILV
+HSLLPAGDEDERTALLLRRYSALAGVELEVCEDVLDAERTRADRNLGLAHLLADAGRLPI
+SAREAVAGYLAQCSVLVTAPQLAVMGATLAAGGTNPVTGERVLDEWVAQQAMSVMLTCGM
+YDASGQWVAEVGVPAKSGVSGALLGAVPGALGLATWSPRLDEQGNSRRGIGLFEGLSARW
+DLHVLQHRGALRGLSGPR
+>4_586
+MDTTRFDDDLRAMLDEVESDRRGEPSDYREDVAGQHVDGLAAAVCTVDGHQAAAGETEHA
+FALQSVSKALTYAVVLQEIGLDHVLEDVGVEPSGESFNHLSLHDDGRPCNPLINAGAILV
+HALLPAGDEDERTALLLRRYSALAGVELEVCEDVLDAERTRADRNLGLAHLLADAGRLPI
+SAREAVAGYLAQCSVLVTAPQLAVMGATLAAGGTNPVTGERVLDEWVAQQAMSVMLTCGM
+YDASGQWVAEVGVPAKSGVSGALLGAVPGALGIATWSPRLDEQGNSRRGIGLFEGLSARW
+DLHVLQHRGALRGLSGPR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001589.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001589.fa
new file mode 100644
index 0000000000000000000000000000000000000000..546e1f6df2819b3f4291860c63afc916e25e6cb4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001589.fa
@@ -0,0 +1,34 @@
+>0_2302
+MPVEPGRDDVGPAGEAGRAVVGAGQRRRVVNPVAATPPSYLGRHYPVPMSHPSPGDLSET
+VPTADLDAVRALVAQARRPVVLTGAGMSAESGIPTFRDAQTGLWERYSPEQLATEDAFLA
+DPDLVWSWYRWRARMVRARRPNPGHDAVAHWQRAVPGLEVVTQNVDDLHERAGARVLAHL
+HGSLFEHRCAECGAPADVDPGAPADAEAAGSEADLEAMLREAPPTCPACGTGRIRPGVVW
+FGEMLPQEPWERAYEALERCDLALVVGTSGLVQPAASLPFVALGAGAAVVEVNPVETELS
+GAVTHALRGSAGAVLPALVAGV
+>1_555
+MADPHPVLAASAPVLADPHPVLAASAPDLDPDALDAVRALVAAAERPVVLSGAGMSAESG
+IPTFRDARTGLWERFSAEELATEEAFLADPALVWSWYRWRARMVRARRPNPGHDAVAAWQ
+RRTPGLEVVTQNVDDLHERAGARVLAHLHGSLFEHRCAECWAPADVDPGAPADEATAGSE
+ADLEAMLREAPPACTVCGDGLIRPGIVWFGEMLPAEPWDRAFAALEDCDLCVVVGTSGIV
+QPAASLPFVALGAGAAVVEVNPVETELSGAVTHVLRGPAGAVLPALVAGVWPGPSGALST
+ARHVTW
+>2_2195
+MSPTQPSDPAALGAVRRLILEAERPVVLTGAGVSAESGVPTFRDAQTGLWERYSPEQLAT
+AEAFAADPSLVWSWYLWRARMVRAVEPNAGHRALAAWQARTPALRIVTQNVDDLHERAGA
+DVLSHLHGSLFAFRCAECDTPADVDPSAVVALAESAAPGSEAGLEALMHLEPPLCAACRR
+GRVRPDIVWFGELLPERAWGDAQAALEECDLCVVVGTSGVVQPAASLPFLALGAGAPVVE
+VNPDRTALSDAMTHVLRGPAGTVLPALLG
+>3_296
+MADPHPVLAASAPVLAASAPVLAASAPDLDPGALDAVRALVAAAERPVVLSGAGMSAESG
+IPTFRDAQTGLWERFSAEQLATEEAFLADPALVWSWYRWRARMVRARRPNPGHDAVAAWQ
+RRTPDLEVVTQNVDDLHERAGARVLAHLHGSLFEHRCAECGAPADVDPGAPSDVDAAGSE
+ADLEAMLREAPPACPACGTGRIRPGVVWFGEMLPQEPWERAYEALERCDLALVVGTSGLI
+QPAASLPFVALGAGVAVVEVNPVKTELSGAVTHALRGSAGAVLPALVAGVWPGPSGALST
+ARHVTW
+>4_556
+MADPHPVLAASAPVLADPHPVLAASAPDLDPGALDAVRALVAAAERPVVLSGAGMSAESG
+IPTFRDAQTGLWERFSAEQLATEEAFLADPALVWSWYRWRARMVRARRPNPGHDAVAAWQ
+RRTPDLEVVTQNVDDLHERAGARVLAHLHGSLFEHRCAECGAPADVDPGAPSDVDAAGSE
+ADLEAMLREAPPACPACGTGRIRPGVVWFGEMLPQEPWERAYEALERCDLALVVGTSGLI
+QPAASLPFVALGAGVAVVEVNPVETELSGAVTHALRGSAGAVLPALVAGVWPGPSGALST
+ARHVTW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001591.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001591.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cf5a20cd68fd1cfa0aadd08d8228c16623268676
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001591.fa
@@ -0,0 +1,45 @@
+>0_2307
+MTVSSSTTTPERGAATDGLSAADPAAGAPAAVDPHASHYAKSAGAGRRIADDEQLHEGRH
+AAPTTDRLSLPALTLGPITVDVPVVLAPMAGITNTAFRRLCREYGGGLYVNEMVTARALV
+ERKPESMRIIKHDPDEVPRSVQLYSVDPVTTGAAVRMLVEEDRADHIDLNFGCPVPKVTR
+RGGGSALPWKSELFASIVKAAVTEAGRKDIPVTVKMRRGIDEDHLTFLDAGRTARDLGVA
+AVALHGRTTRQFYSGTAVWEDIARLREALPDIPVLGNGDIWSAEDAIAMVEQTGVDGVVI
+GRGCQGRPWLFGDLQAAFEGRHDRFRPTLGMVADTLYRHAELLVDTFEGDELKALRDIRK
+HVAWYFKGYPVGSEIRTALSTVPDLATMAEILSRVDRDQPYPGLDAEGPRGRSGAPKRPH
+LPDGWLDSRELNAEQKAMIAAAELDVSGG
+>1_550
+MTSSHTLPAAAVTDADDVAHYAKSAGAGRRITDDDQLHEARHPAPTTDRLTLPPLRLGPL
+TIDVPVVLAPMAGITNTAFRRLCREYGGGLYVNEMVTARALVERKPESMRIIQHDPDEVP
+RSVQLYSVDPVTTGAAVRMLVEEDRCDHIDMNFGCPVPKVTRRGGGSALPWKAELFASIV
+KAAVTEAAKKDIPVTVKMRRGIDEDHLTFLDAGRTARDLGVAAVALHGRTTRQFYSGTAV
+WDDIARLREALPDIPVLGNGDIWSAEDAIAMVEQTGVDGVVIGRGCQGRPWLFGDLQAAF
+EGRQDRFQPTLGMVADTLYRHAELLVDTFGGDETKALRDIRKHVAWYLKGYPVGSEIRTA
+LSTVPDLATMREILARVDRDQPYPGEAAEGPRGRAGAPKRPHLPDGWLDSRELNAEQQAM
+IQAAELDVSGG
+>2_2197
+MTASHTLPDAAVDPHYAKSAGAGRRIADDDQLHEGGHAAPRSDRLNLPPLKLGPITVDVP
+VVLAPMAGITNTAFRRLCREYGGGLYVNEMVTSRALVERKPESMRIIQHDPDEVPRSVQL
+YSVDPVTTAAAVRMLVEEDRADHIDMNFGCPVPKVTRRGGGSALPWKSELFASIVKAAVT
+EASKKDIPVTVKMRRGIDEDHLTFLDAGRTARDLGVAAVALHGRTTRQFYSGTAVWEDIA
+RLREALPDIPVLGNGDIWSAEDAIAMVEQTGVDGVVIGRGCQGRPWMFGDIQNAFEGRPE
+RFHPTLGMVADTLYRHAELLVDTFGGDEVKALRDIRKHVAWYFKGYPVGSEVRTGLSTVP
+NLATLRELLDRLDRDMPYPGAPAEGPRGRAGAPKRPHLPDGWLDSRELNEEQRAMIHAAE
+LDVSGG
+>3_291
+MTSSHTLPAAAMTDADDVADPHAAHYAKSAGAGRRITDDDQLHEGRHPAPTTDRLTLPPL
+RLGPLTIDVPVVLAPMAGITNTAFRRLCREYGGGLYVNEMVTARALVERKPESMRIIQHD
+PDEVPRSVQLYSVDPVTTGAAVRMLVEEDRCDHIDMNFGCPVPKVTRRGGGSALPWKSEL
+FASIVKAAVTEAAKKDIPVTVKMRRGIDEDHLTFLDAGRTARDLGVAAVALHGRTTRQFY
+SGTAVWDDIARLREALPDIPVLGNGDIWSAEDAIAMVEQTGVDGVVIGRGCQGRPWLFGD
+LQAAFEGRQDRFQPTLGMVADTLYRHAELLVDTFGGDETKALRDIRKHVAWYFKGYPVGS
+EIRTALSTVPDLATMREILTRVDRDQPYPGEAAEGPRGRAGAPKRPHLPDGWLDSRELNA
+EQQAMIQAAELDVSGG
+>4_551
+MTSSHTLPAAAVTDADDVADPHAAHYAKSAGAGRRIADDDQLHEARHPAPTTDRLTLPPL
+RLGPLTIDVPVVLAPMAGITNTAFRRLCREYGGGLYVNEMVTARALVERKPESMRIIQHD
+PDEVPRSVQLYSVDPVTTGAAVRMLVEEDRCDHIDMNFGCPVPKVTRRGGGSALPWKSEL
+FASIVKAAVTEASKKDIPVTVKMRRGIDEDHLTFLDAGRTARDLGVAAVALHGRTTRQFY
+SGTAVWDDIARLREALPDIPVLGNGDIWSAEDAIAMVERTGVDGVVIGRGCQGRPWLFGD
+LQAAFEGRQDRFRPTLGMVADTLYRHAELLVDTFGGDETKALRDIRKHVAWYFKGYPVGS
+EIRTALSTVPDLATLREILARVDRDQPYPGEAAEGPRGRAGAPKRPHLPDGWLDSRELNA
+EQKAMIQAAELDVSGG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001592.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001592.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5ae28a504e6193118ae3611d2bde6ad29f72516d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001592.fa
@@ -0,0 +1,20 @@
+>0_2308
+MTEQPQDPRQDQTAAEPAPEPAEALAAETTDAVAPEAAPGEAGQPSPEMLELAGRMFDAA
+RSGDAETLEAYIVAGLNPDLQNGKGDTFLTLAAYHDQPGVVEMLIRVGADVEKANDRGQR
+PLTCATFKGDVASMRLLLAAGADPDAGTPSARQTAQMFGGEEITAVLDEPR
+>1_549
+MSEQWSEKDIELANRLFDMARDGDTAQLKAYLDAGVSTRLRNHAGDSFLTLAAYHEHPDT
+VAMLIEAGAEIEHANDRGQRALTCATFKRDVASMRHLLAAGADPDAGTPSARQTAQMFAG
+ADLLAVLDGGGAAPPSEA
+>2_2198
+MTEHQDTQGQHAPATPPAEPAVESAGPSPEMLELAGRMFDAARTGDVDTLEAYIVAGLNP
+DLQNGKGDTFLTLAAYHDQPAVVEMLIRVGADVEKANDRGQRPLTCATFKGDVASMCLLL
+AAGADPDAGTPSARQTAQMFGGERVAAVLDEAR
+>3_290
+MSEQWSEKDIELANRLFDMARDGDTAQLKAYLDAGVSTRLRNHTGDSFLTLAAYHEHPDT
+VAMLIEAGAEIEHANDRGQRALTCATFKRDVASMRHLLAAGADPDAGTPSARQTAQMFAG
+ADLLAVLDGGDAAPASEA
+>4_550
+MSEQWSEKDIELANRLFDMARDGDTAQLKAYLDAGVSTRLRNHAGDSFLTLAAYHERPDT
+VAMLIEAGAEIEHANDRGQRALTCATFKRDVASMRHLLAAGADPDAGTPSARQTAQMFAG
+ADLLAVLDREDAAPSSEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001613.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001613.fa
new file mode 100644
index 0000000000000000000000000000000000000000..90595c6cc1ada59f718683e80b76318f6584853d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001613.fa
@@ -0,0 +1,15 @@
+>0_2349
+MSAAHEPRTPNAAGTPDDAAAEPTTADPLQLRGVELDPEEMAALTAVLAHARAAEAEAAR
+AAAEAADPRPLDRTLRRRGDLGLWARPGRGQWRRGAGLQ
+>1_522
+MSALLGPGAPDENDESTQATPASADPLQLSGPELEPEEMAALAAVLEAAAAARAEAARLA
+AAAADPRPLDRTLRRRGDLGLWARPGRGQWRQGAGPQ
+>2_2232
+MSAALPDDAADREVQDPEPMRLTGSSLEPEEMAALTAVLAQMRAQGGAAVPQAGRSGRLR
+RPDRSLVRRGDLGLWARPGEDQWRRAAGRR
+>3_256
+MSALLGPGAPDENDASTQATPAPADPLQLSGPELEPEEMAALAAVLEAAAAARAEAARLA
+AEAADPRPLDRTLRRRGDLGLWARPGRGQWRQGAGPQ
+>4_525
+MSALLGPGAPDENDESTQATPASADPLQLSGPELEPEEMAALAAVLEAAAAARAEAARLA
+AAAADPRPLDRTLRRRGDLGLWARPGRGQWRQGAGPQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001618.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001618.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4a2146b275dfad8f05abc95f779207e295d3ec43
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001618.fa
@@ -0,0 +1,30 @@
+>0_2357
+MSEQTFSPSPASPLAGDHPGFDQARAAAAVIADATGVAEHRIAVVLGSGWGEAAGLIGEE
+VAAVPLAEVPGFHAPKVPGHNAVIRSVRLPDGTHALVFGSRTHFYESRDAQAVAHTVRTA
+AAAGAKTVVLTNGCGGLDPEIAPGTPVLISDHLNLTGATPLVGATFVDLTDLYSPRIRQI
+AREVDPSLREGVYVQFSGPQYETPAEVRMARTLGGDLVGMSTALDAIAARHAGLEVFGMS
+LVTNLGAGISETALSHGEVVEAGQAAGPRISRLLADIVWRL
+>1_516
+MTDQTSIPSPDSPLTGDHPGFAEARAAADTIARATGVAEHRVAVVLGSGWGEAAGLIGDE
+VAAVPLAEVPGFHAPKVPGHNAVIRSVRLPDGTHALVFGSRTHFYESRDAQAVAHTVRTA
+AAAGARTVVLTNGCGGLDPEIAPGTPVLIADHINLTGATPLVGATFVDLTDLYSPRLRAI
+AREVDPSLREGVYVQFAGPQYETPAEVRMARTLGGDLVGMSTALDAIAARHAGLEVFGIS
+LVTNLGAGISETPLSHAEVVEAGQAAGPRIARLLADIVGRL
+>2_2239
+MSEQSTPTPTPASLARLAGDHPGFAEARAAAEAIAEATGCAEHRIAVVLGSGWGEAAELI
+GVERARIDLADVPGFHAPKVPGHNAVIRSVELADGSRALVFGSRTHFYESRDAQAVAHTV
+RTAAAAGAATVVLTNGCGGLDPEIAPGTPVLIADHINLTGATPLVGATFVDLTDVYSPRI
+RAIAQEVDPTLTEGVYVQFSGPQYETPAEVRMATALGGDLVGMSTALDAIAARHAGLEVF
+GISLVTNHGAGIQETPLSHQEVVEAGQAAGPRISRLLAEIVGRL
+>3_249
+MTDQTSIPSPDSPLTGDHPGFAEARAAADTIARATGVAEHRVAVVLGSGWGEAAGLIGEE
+VAAVPLAEVPGFHAPKVPGHNAVIRSVRLPDGTHALVFGSRTHFYESRDAQAVAHTVRTA
+AAAGARTVVLTNGCGGLDPEIAPGTPVLIADHINLTGATPLAGATFVDLTDLYSPRLRAI
+AREVDPSLREGVYVQFAGPQYETPAEVRMARTLGGDLVGMSTALDAIAARHAGLEVFGIS
+LVTNLGAGISETPLSHAEVVEAGQAAGPRIARLLADIVGRL
+>4_519
+MTDQTSIPSPDSPLTGDHPGFAEARAAADTIARATGVAEHRVAVVLGSGWGEAAGLIGDE
+VAAVPLAEVPGFHAPKVPGHNAVIRSVRLPDGTHALVFGSRTHFYESRDAQAVAHTVRTA
+AAAGARTVVLTNGCGGLDPEIAPGTPVLIADHINLTGATPLVGATFVDLTDLYSPRLRAI
+AREVDPSLREGVYVQFAGPQYETPAEVRMARTLGGDLVGMSTALDAIAARHAGLEVFGIS
+LVTNLGAGISETPLSHAEVVEAGQAAGPRIARLLADIVGRL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001622.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001622.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8c94e06fec4aebd9134b8c4f2c6c431d154d18a2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001622.fa
@@ -0,0 +1,32 @@
+>0_2362
+MSQDRRAPIRNPFLEPGASVPGAPPRRADADPEDRLAEFRLGPAFGGRPAQPRRPQGFGG
+RTAPGEGTTTTPRPDGTAAAEPADTAAEPVDTAAEPAANPKTARPAESAEAADAPAPAPA
+PLPTVRVLAVCTGNICRSAYVQHTLQAQLNALLGDRGRAEVTSAGTEPNQALTVPEPLRE
+LSPSRRVRAALTEHRPQQLTAASLWGQDLVITAADDHLEEVLREDPGAVRRTFTVRGIGT
+LLGEHGEEIAAAVPPGAGLAALVDAMADLRVRLIGRGEEPDADLPDPFRGPAEGYAQMVE
+TARPIVELLAWEIARALDGDLVEDDEPTRV
+>1_511
+MSRDHRPPIRNPFLPPTPEEPEVPARDGGHPAGDGGDADAPAASTAREDRLAEFRLGPAF
+RPHPADRVPGPVPSARVLVVCTGNICRSAYVEYALQAQLNALLGDRGRAEVTSAGTEPNQ
+ALTVPGPLLDRAPSRRVRAALTQHRPQQLTGRSLAGQDLVLTATDDHLDEVLREDPAAVR
+RTFTILGMGTLLRDHGEELAAAVPPGAGVTALVTALAALRSRLIAHGERPDADLPDPFRG
+PAEGYAAMAQTAQPIVELLAWEIARALDGDLVEEEPTGA
+>2_2243
+MSWFERPALRSPFAAAPGMDAPADDGAGGPLRILTVCTGNICRSAWAHHVLQARLDAALG
+ADVVEVSSAGTGPNQALAVPEELLTLAPDAGVRAALAAHRPRRLTARVLAGQDLVLTATE
+AHRDAVVREAPAALRRSATLLDAGALLADPDAVAPGGGGRALVAALEAARREGRGLDAGR
+RGLFPAGRRAADLADPFRGPAEGYTEMTRALEPALAAVEAAVVRAVEPAR
+>3_244
+MSRDHRPPIRNPFLPPTPEEPEVPARDGGHPAGDGGDADAPAASTAREDRLAEFRLGPAF
+RPHPADPATPRQRATPTERTVAPAPVRAAEPASPASPAGRVPGPLPSARVLVVCTGNICR
+SAYVEYALQAQLNALLGDRGRAVVTSAGTEPNQALTVPGPLLDLAPSRRVRAALTQHRPQ
+QLTGRSLADQDLVLTATDDHLDEVLREDPAAVRRTFTILGMGTLLRDHGEELAAAVPPGA
+GVTALVTALAELRSRLIAQGERPDADLPDPFRGPAEGYAAMAQTAQPIVELLAWEIARAL
+DGDLVEEEPTGA
+>4_514
+MSRDHRPPIRNPFLPPTPEEPEVPTRDGGHPAGDGGDAGAPAAATAREDRLAEFRLGPAF
+LPHPADPAAPRQHATPAERAVAPATAAAAEPASPAAPADRVPGPLPSARVLVVCTGNICR
+SAYVEYALQAQLNALLGDRGRAVVTSAGTEPNQALTVPGPLLDLAPSRRVRAALTQHRPQ
+QLTGRSLADQDLVLTATDDHLDEVLREDPAAVRRTFTILGMGTLLRDHGEELAAAVPPGA
+GVTALVTALAELRSRLIAQGERPDADLPDPFRGPAEGYAAMAQTAQPIVELLAWEIARAL
+DGDLVEEEPTGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001624.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001624.fa
new file mode 100644
index 0000000000000000000000000000000000000000..154d9f61ac7a35c7701854bd3efd66c12c0bdacd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001624.fa
@@ -0,0 +1,16 @@
+>0_2367
+MAADRLPAPFGMTSERGSAWAVAPGVAWALTDGGDAAVMHLEHGVPLLLSPTGHAVWDVL
+VGGRTPEDDLTAAPPIPLPEEAVAAETAAAFGLAPEDVAADVGAFLAMLEQHGVVVRVGG
+VLPRP
+>1_509
+MTVETTEGWTLAPNIAWARTAGGQAAVMTLEAGQPLLLGASGDVIWDVLVGGRTPEDDLV
+ADPPASLSTTDVTVQVAEAFGLAPADVAADVHAFLEMLEAHGVLVRVRTA
+>2_2248
+MSDAEHPPFAQAPAARAWRVAPTTAWVRSGEHQVTVMDLDEGNPQVLSPTGSAVWELLLD
+GRTPEDDLAADPPKPVEEEALCGAVAEAFGVDVEVVAADTRAFLGMLAGHRLVVPAVLP
+>3_239
+MTVETTEGWALAPDIAWARTAGGQTAVMTLEAGQPLLLSASGDVIWDVLVGGRTPADDLV
+ADPPAPLSTTDVTVQVAKAFGLYPADVAADVHAFLEMLEAHGVLVRVRTA
+>4_509
+MTVETTEGWALAPDIAWARTAGGQAAVMTLEAGQPLLLSASGDVIWDVLVGGRTPEDDLI
+ADPPVPLSTTDVTVQVAEAFGLDPADVAADVHAFLEMLEAHGILVRVRTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001628.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001628.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d3d1c64b429831813e045fcc60d2703bc8fcc275
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001628.fa
@@ -0,0 +1,25 @@
+>0_2371
+MSAGTTLIVGLGNPGPEYERTRHNVGQMVADELASRMGAGFTRHRAGAVVATGRLGIGGP
+RVVLAKSTGYMNVSGRPVSALASFYGVGPEDLVVVHDELDIPFDALRLKRGGGEGGHNGL
+KSITASLGTKDYARVRVGIGRPPGRMDVADFVLRSFSKPEQDALPLHVDRAADAVEKLVT
+DGLEAAQQAFH
+>1_504
+MTTGTTLIVGLGNPGPEYERTRHNVGQMVADELASRMGVGFTRHRAGAVVATGRLGIGGP
+RVVLAKSTGYMNVSGRPVSALAAFYGIGPEDLVVVHDELDIPFDTLRLKRGGGEGGHNGL
+KSITASLGTKDYARVRVGIGRPPGRMDVADFVLRPFTKPEQDALPLHVDRAADAVEKLVT
+DGLEPAQQAFH
+>2_2253
+MTGTTLIVGLGNPGPEYERTRHNVGHMVAGELASRMGVGFTRHKAGAVVATGRLGIGGPR
+VVLAMSTGYMNTSGRPVSALTNFYDVAPEDLVVVHDELDIPFETLRLKRGGGEGGHNGLK
+SITASLGTKDYHRVRVGIGRPPGRMDVADFVLKPFTKQEQELLPLHVDRAADAVEKLVTD
+GLEAAQQAFNS
+>3_234
+MTTGTTLIVGLGNPGPEYERTRHNVGQMVADELASRMGVGFTRHRAGAVVATGRLGIGGP
+RVVLAKSTGYMNVSGRPVSALASFYGIGPEDLVVVHDELDIPFDTLRLKRGGGEGGHNGL
+KSITASLGTKDYARVRVGIGRPPGRMDVADFVLRPFTKPEQDVLPLHVDRAADAVEKLVT
+DGLAPAQQAFH
+>4_504
+MTTGTTLIVGLGNPGPEYERTRHNVGQMVADELASRMGVGFTRHRAGAVVATGRLGIGGP
+RVVLAKSTGYMNVSGRPVSALASFYGIGSEDLVVVHDELDIPFDTLRLKRGGGEGGHNGL
+KSITASLGTKDYARVRVGIGRPPGRMDVADFVLRPFTKPEQDVLPLHVDRAADAVEKLVT
+DGLEAAQQAFH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001629.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001629.fa
new file mode 100644
index 0000000000000000000000000000000000000000..813ae286f62201f3dd6fc4ee245f7f4a559f2005
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001629.fa
@@ -0,0 +1,25 @@
+>0_2372
+MSDKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQDPIHLLLPAQETTLAVRNPNALLT
+VVNEAGEEHLVLPKDIQRHALKDTVEHLDLIEVRRGEKVVVDVTVHVEGEVAKGNDYVLD
+HVTVPLEAEATHLPESVTISVEGREAGEHVYATDVQVPAGTTLQLEDEIVIATVSEVVEQ
+DLGDESVQEEQAAEGEAAEGESAEGESEGSED
+>1_503
+MSDQLKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQDPVHLLLPAQETTLAVRNPNAL
+LTVVNEAGEEHLVLPKDIQRHAIKDTVDHLDLIEVRRGEKVVVEVTVQVEGEVAPGTEYV
+LDYATVPVEADATDLPEVVTISIEGREAGDHVYAPDVQVPAGATLQLEDDIVIATVNEVV
+EQDLGDESVQEEQAAESAED
+>2_2254
+MSDQIKLKVTRRTDFGKGASRQARRAGQIPAVVYGHGAEPIHLLLPAQETTLAVRNPNAL
+LTVVNEAGEEHLVLPKDIQRHPIRQTVDHLDLIEVRRGEKVVVEVPVHVEGELSTAVDAE
+YVLDYPTVPVEAEATDLPENVLISVEGREPGQHVYATDVQVPAGVTLQLEDEIVIATVSE
+VVEQDLGDESVQEEQAAESAEGAEGEGESEGSEESAEGESEGSED
+>3_233
+MSDQLKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQEPVHLLLPAQETTLAVRNPNAL
+LTVVNEAGEEHLVLPKDIQRHAIKDTVDHLDLIEVRRGEKVVVEVTVQVEGEVAPGNDYV
+LDYVTVPVEADATDLPEAVTISVEGREAGDHVYAPDVQVPAGATLQLEDDIVIATVSEVV
+EQDLGDESVQEEQAAESAEGESEGSED
+>4_503
+MSDQLKIKVTRRTDFGKGAARQARRAGLIPAVVYGHGQEPVHLLLPAQETTLAVRNPNAL
+LTVVSEAGEEHLVLPKDIQRHAIKDTVDHLDLIEVRRGEKVIVEVTVQVEGEVARGNEYV
+LDYVTVPVEADATDLPEAVTISVEGREAGDHVYAPDVQLPAGATLQLEDDIAIATVNEVL
+EQDLGDESVQEEQAAESAEGESEGSED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001630.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001630.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6874b85550e07ad5af5ddc451209d7c07507a9cd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001630.fa
@@ -0,0 +1,45 @@
+>0_2374
+MKITETAIPGLLVIDLDVHGDNRGWFKENWQREKIRALAAEHPRLATLAPVQNNISFNDA
+VGTTRGIHAEPWDKYVAVAHGRIFGAWVDLREGPSFGAVATVELGPEKAVFVPRGVGNSY
+QTLEPDTAYTYLVNDHWSADAQSQYTFLNLADPTAAIAWPIPLEEAELSDKDRAHPMLAD
+VTPMPPAPILVLGAGGQLGRALVARAEAAGIPVEAHDRTTWDLEDPDSWPREHFRGLRAV
+VNASAMTAVDAAETPEGRAQAWAVNATAVAELARRCAEAGVPLAHVSTDYVFDGTLPVGQ
+EHPVDHPLAPLGVYGQSKAAGEAAVRTVPRHWIVRTSWVIGEGRNFVATMASLAERGIDP
+AVVDDQHGRLTFADDLADALLHLVTTDAPTGTFHMTNSGDVVTWHDVARWVFEDTGHDAA
+RVSATTTAAYTAGKEGVAPRPTNSALDLGPLAVVGYTAPDQRGRLRDHLSELTGDAR
+>1_499
+MRITETAIPGLLVLDLDVHGDNRGWFKENWQREKIRALAAEHPRLAALAPVQNNISFNDA
+VGTTRGIHAEPWDKYVAVAHGRIFGAWVDLREGPSFGAVATVELGPEKAVFVPRGVGNSY
+QTLEPDTAYTYLVNDHWSADAQGRYTFLNLADPTAAIAWPIPLEDAELSDKDRAHPMLAD
+VTPMPSAPILVLGAGGQLGRALVARAEAAGIPVEAHGRDTWDMTDPASWPREHFRGLRAV
+VNASAMTAVDAAETPEGRAQAWAVNAAAVAELARRCTKAGVPLAHVSTDYVFDGALPVGQ
+EHPVDHPLAPLGVYGQSKAAGEAAVRTVPRHWIVRTSWVIGEGKNFVATMASLAERGIDP
+AVVADQHGRLTFADDLADALLHLVTTDAPTGTFHMTNSGDVVTWHDVARWVFEDTGHDAA
+RVSATTTAAYLAGKEGVAPRPTNSALDLGPLAAVGYTAPDQRERLRDHLTEFKAGTC
+>2_2256
+MKITETAIPGLLVLDLDVHGDNRGWFKENWQREKIRALAAEHPRLASLAPVQNNISFNDA
+VGTTRGIHAEPWDKYVAVAHGRIFGAWVDLREGPSFGAVATVELGPEKAVFVPRGVGNSY
+QTLEPDTAYTYLVNDHWSADAQGQYTFLNLADPTAAIAWPIPLEDAELSDKDRAHPMLAD
+VTPMPPAPILVLGAGGQLGRALVARAEAAGIPVEAHGRDTWDMTDPASWPREHFRGLRAV
+VNASAMTAVDAAETPEGRAQAWAVNATAVAELARRCTEAGVPLAQVSTDYVFDGTLPVGQ
+EHPVDHPLAPLGVYGQSKAAGEAAVRTVPRHWIVRTSWVIGEGKNFVATMASLAERGIDP
+AVVADQHGRLTFADDLADALLHLVTTDAPTGTFHMTNSGDVVTWHDVARWVFEDTGHDAA
+RVSAATTAEYMAGKEGAAPRPTNSALDLGPLAAVGYTAPDQRERLRDHLSEAAGGTR
+>3_230
+MRITETAIPGLLVLDLDVHGDNRGWFKENWQREKIRALAAGHPRLASLAPVQNNISFNDA
+VGTTRGIHAEPWDKYVAVAHGRIFGAWVDLREGPSFGAVATVELGPEKAVFVPRGVGNSY
+QTLEPDTAYTYLVNDHWSADAQGQYTFLNLADPTAAIAWPIPLEDAELSDKDRAHPMLAD
+VTPMPPAPILVLGAGGQLGRALVVRAEAAGIPVEAHGRDTWDMTDPASWPREHFRGLRAV
+VNASAMTAVDAAETPEGRAQAWAVNATAVAELARRCTEAGVPLAHVSTDYVFDGTLPVGQ
+EHPVDHPLAPLGVYGQSKAAGEAAVRTVPRHWIVRTSWVIGEGKNFVATMASLAERGIDP
+AVVADQHGRLTFADDLADALLHLVTTDAPTGTFHMTNSGDVVTWHDVARWVFEDTGHDAG
+HVSATTTAAYLAGKEGVAPRPTNSALDLGPLAAVGYTAPDQRERLRTYLRR
+>4_499
+MRITETAIPGLLVLDLDVHGDNRGWFKENWQREKIRALAAEHPRLASLAPVQNNISFNDA
+VGTTRGIHAEPWDKYVAVAHGRIFGAWVDLREGPSFGAVATVELGPEKAVFVPRGVGNSY
+QTLEPDTAYTYLVNDHWSADAQGQYTFLNLADPTAAIAWPIALEDAELSDKDRAHPMLDD
+VVPMPPAPILVLGAGGQLGRALVARAEAAGIPVEAHGRDTWDMADPASWPREHFRGLRAV
+VNASAMTAVDTAETTEGRAQAWAVNATAVAELARRCTEAGVPLAHVSTDYVFDGALPVGQ
+EHPVDHPLAPLGVYGQSKAAGEAAVRTVPRHWIVRTSWVIGEGKNFVATMASLAERGIDP
+AVVADQHGRLTFADDLADALLHLVTTDAPTGTFHMTNSGDVVTWHDVARWVFEDTGHDAA
+RVSATTTAAYLAGKEGVAPRPTNSALDLGPLAAVGYTAPDQRERLRDHLTEFKAGTC
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001631.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001631.fa
new file mode 100644
index 0000000000000000000000000000000000000000..af19d0633193de6d4b69993d049a38d41136bf20
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001631.fa
@@ -0,0 +1,43 @@
+>0_2379
+MSTRARSSSTPTAPSVSVVIPVYNGAPTLPLQLEALHTQVGAPAFEVVVVDNRSTDDLDG
+AVRPFMESGPPLRVVRADGHQGSSYARNRGIAAARAPYVMFCDADDVVSRHWVATGAAAF
+ATAPIWTGSVTHLPAAVFEQGLEAVRDLLGDGPRPQDGPGREVPGPFPVLMGGDFGASRE
+LLVAVGGFDQSFPHAGDDNDLAFRVLRAGHRLVEMPQVRVASRGKTSLQTAHRIAFRSAR
+AHALLADRYGLWERSRATTWASEPVRCLGAAVKMAAHPTRADWRGLACRTAMASGTLAGA
+VEYHLLRRRPAPQVGLGLDPDDTALPGEEPQGAGGPGHPELVSVIIPAYNAEAYIAEQIE
+SLAVQVDAPEFEVIVADNGSTDRTASTAREAAERWGLTLTVVDARGPASASHARNVGAMA
+AAGGVLLFCDADDFVGPEWVRELAAAVRSREDALAVGTLLHRRFNDAAVLAAYGIPPEAG
+EPRTDAAGYPVVHGGFAGHLPTVAGNDFGVRRSLYLAVGGMDSSFPGGSEETDFSWRAQR
+RGAVVVHAPRAIVHYRLRSTPQTVFRQQRIQQVGRMLLWMRHRGDGMSGPSWRVSVTEVA
+RHLPAYLLVRERAARLRHARIAGGHLGALQGMVRYRLLKRIPPRRLVDGSSVPRA
+>2_2262
+MNQAVSVVIPCHNAAGSMQRQVDALLPQLEETDELLLVENRSADGTRRIAEEAALRDARV
+RVLNAPDKAGANHARNIGAARAHNPIILFCDADDVVHSGWVRSLRQVLGTDGIAGGSATP
+VDEEGRRLGPDLGLHETFGGPAYPLGATMGVRREVLETIGGFDESYAGGHDETDLAWRAA
+RAGWPTHFVPEARIDYVQRPDARSALQQRRLYARTSIQVWVQNPDLVDQSAVSLRGALNG
+VRLGLPLGIKMIRGTATARDAARWGWALGVLEGHLRYRVLGRPPARVAPPIPPAPHPAEP
+NRPCA
+>3_193
+MTVESVDVSVIIPMHNGGELIHEQLDALAAQRTDLNWEVIVGDNRSTDGSPDAVRARADS
+FPVPLAVVDAFRVQGASHARNAAAAAARGEVLAMCDADDRVAPDWVEQAFRGVREIAPMV
+AGANRLLSHPQRPDAPLLNPRILHGRGAQTCNAAVRRDVFLASGGFDESLPPYGVEDSDL
+SARVLAAGHTIAPHPGLVLYFRETTGLKAKLRKIHSSGQAEAVLWSRGHEAQGTPLAESQ
+FVVALAALPADAVRTARARELRSLPKWTLREAAVRTGRWRGYRRWVKTGKAGEPRLPFLD
+GRGGAA
+>3_223
+MFADADDVVSRWWVRNGARAFESSDLWSGGAPFMTDEQMREGVEGARRAFDDSDEWHAPV
+PGDLRNAFPVLMGGDFGVTREVFERVGGFDHSLGAVYEDNDFAVRAHLKGIRVDEAAAVR
+IAFRGKWDMRFRTRLVRRSAKAHSLVTTRYELGRQSHFPNPWVEFVRTGASAALMTLGCK
+TPDWEGVRLRAQTAAGAAAGRVEYRWMRRGPQPQIGLGYRRADSSPFSQADAAGAGENSE
+EVLAASVVIPARNAEGWIGEQLDSLAAQCDAPLFEVVVADNGSYDRTAQIALSHPTPFQV
+RVVDASGVPSASHARNVGARLARGHVLLFCDADDFVGDRWAGELYRAVTSGPQLVARGVL
+EHSRFNDVDVLAAYRIDPAQDLHDTEDSPRIERVSDGFAGYLATVPGNNFAIRRDDYLKL
+GGMDPAYPGGSEETDFVWRAQEAGFTVVQAAGAVVYYRLRTTPAAIFRQQRNQQRGRMYL
+WTRYRGRGMSGPSVKASVFAISRHMPMWPFLRRDRGRALAWAYTVGAHVGALEGMARYRR
+PALLRSRRPGSDGGTAA
+>4_493
+MSRPVSVIIPCHNAAAWVDRQISAVLAQLRADDELVLVDNRSTDTTYERLEAAAAGDRRV
+RTVSAPERPGANHARNVGIAAARNPLLLFCDADDLVTGGWVEAFRAALQNAGITGGAATP
+VDADGCRIGSDLGLHEIFGGPAYPLGACMAIRKDVVNAVGGFDESFAGGHDETDLAWRAE
+RAGWPTAFVPDARIDYLQRPDAAATVRQRRAYARTSIQLWARHPETVNPHGVSVKGAVRG
+VLRGLPNAVRVLRGRASADQAAQWGWSLGLLEGHLRYRILGKPPAAHTPRPDASA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001633.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001633.fa
new file mode 100644
index 0000000000000000000000000000000000000000..83f615538ed2e3778cfd01cb813ce258cb4becde
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001633.fa
@@ -0,0 +1,40 @@
+>0_2385
+MTDTTRGRIAIAHDYLTQKGGAERVVLALHRMWPDAPIYTTFYDPEGTFPEFKDARIITS
+PLNRVGVLRRDPRRALPLLPVASSLMHVKEPVAVVSTSGWAHGFRYHGDTLVYCHTPARW
+VYLLEDYLGEEGQKSMKGRVARVLRPGLRAWDRAAQRRRTRYVANSTVVKERIEEAYGLT
+DVPIVFPPHSVSTDGSQEPIPGAEHLAEGGYLLSVARLMPYKHVDVAIRAAERTGLRLLV
+IGKGPDEARLKAMAGDGVVFAQDLTDAQLRWAYAHATALIAASHEDFGITPLEASAWGVP
+TVALRAGGYLDTITEGVNGVFVEAPTVEAVTDGVEQALARDWDPPAMRAHAERFSEDQIA
+RQVRTQLGQLQNHARNKGAM
+>1_490
+MTDMTRGRIAIAHDYLTQKGGAERVVLALHRMWPDAPIYTTFYDPEGTFPEFKDARIITS
+PLNRVGVLRKDPRRALPLLPLASSLLHVKEPVAVVSTSGWAHGFRYDGATLVYCHTPARW
+VYLLDDYLGEGGRNSIKGRIARALRPGLRRWDRAAVRRRSRYVANSTVVKERIEDVYGLD
+GVDLVFPPHSVSTDGPQEPIPGAERLAEDGFLLSVARLMPYKHVDVAIEAAARAGRPLVV
+IGKGPEEARLRAMAGEDVVFGQDLTDAQLRWAYAHAIALIAASHEDFGITPLEASAWGVP
+TVALRAGGYLDTIVDGVNGTFVLDASIDAVGEGIKKLQAARWDTAAMRRHVEKFSEREFA
+LRIRALVEGLPGA
+>2_2267
+MKIHASRPLSARRASQPGRIAIAHDYLTQKGGAERVVLALHRMWPDAPIYTTFYNPEGTF
+PEFKKARIITSPLNRVGVLRSDPRRALPLLPLASSLMHVKEPLAVVSTSGWAHGFRYEGD
+TLVYCHTPARWVYLLEDYLGEGGQRSLKGRVARALRPALRAWDSAAQLRRTRYVANSTVV
+KRRIEEVYGVANVDLVFPPHSVSTDGPQAPIPGAEDLAEGGYLLSVARLMPYKHVDVAIR
+AAERTGRRLLVIGKGPEEARLRALAGQGVVFAQDLTDAQLRWAYAHAVALIAASHEDFGI
+TPLEASAWGVPTVALRAGGYLDTIVEGVNGVFVPEPTVEAVTDVVEQVLAQDWDRGAMQA
+HAEHFSEVAFRERLARLLDDPHGAV
+>3_219
+MSEQTPATIAIAHDYLTQKGGAERVVLALHRMWPDAPIYTTFYDPEGTFPEFEDAHIVTS
+PLNRVGVLRKDPRRALPLLPLASSLMHVKEPIAVVSTSGWAHGFRYDGATLVYCHTPARW
+VYLLDDYLGEDGRNSIKGRIARVLRPGLRRWDRAAVRRRSRYVANSTVVKKRIDDVYGLD
+GVDLVFPPHSVSTDGPQGPIPGAEQLAEDGFLLSVARLMPYKHVDVAIEAAARAGRPLVV
+IGKGPEEARLRAMAGEDVVFGQDLTDAQLRWAYAHATALIAASHEDFGITPLEASAWGVP
+TVALRAGGYLDTIVDGVNGVFVEEPTVDAVAGGVERLLAHDWDRAAMQAHAERFSEAQFG
+RRIRALVAESPAGPAHRGRQ
+>4_489
+MTDTTRGRIAIAHDYLTQKGGAERVVLALHRMWPDAPIYTTFYDPEGTFPEFKDARIITS
+PLNRVGLLRKDPRRALPLLPLASSLMHVKEPIAVVSTSGWAHGFRYDGATLVYCHTPARW
+VYLLDDYLGEGGRDSIKGRIARVLRPGLRRWDRAAVRRRSRYVANSTVVKERIEEVYGLI
+DVPVVFPPHSVSTDGPQEPIPGAEHLAEGGYLLSVARLMPYKHVDVAIRAAERTGLRLLV
+IGKGPEEARLKAMAGDGVVFAQDLTEAQLRWAYAHATALIAASHEDFGITPLEASAWGVP
+TVALRAGGYLDTIVEGVNGVFVNGTSVAAVAGGIEWVRAHNWDRAAMRSHARRFSEFEFG
+QQVQAQLGWIGISR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001638.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001638.fa
new file mode 100644
index 0000000000000000000000000000000000000000..227d7041aab0ed1b79122f2b05a0f8fb7a75190e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001638.fa
@@ -0,0 +1,40 @@
+>0_2391
+MSGVGSGDVPLFWRPEDLPAWQRWQRAQWPASRRLADTARRLARAGRGALAAGRGAAPAP
+ESGLRLVLPAGDVHTLVGVESAAPTQRAALVEPVRALAEGRAGHAAADAARTAAGVGWVV
+PADVVAAQLPDLPGSDALSVHAVDDVMVAERLGGLRCVLVAGEYLPAGRAAVRWARERGA
+RVGVVQHGLLAVSTPPVPRDVALYAFTDHDAHWWTQGRTDVQAVAVGSALLEAARRMASH
+AVADAVPRAAGPGVFLGQLHGAELPRTDFARAAQEYVRATGAAYRPHPAERDRLSLAQHE
+AWRKAGMRIDATAGPLASTAGPVAAVFSTGILEAAQAGRPAWAVHPDPPAWLEGFWERYG
+MTRWRPGVETEPTPPLASPSADPAAAIAAHLWKETA
+>1_483
+MTDAPLFWRSEDLPRWHAWQRAQWPLTRRAADTARSTVRGVAGALTRRRSTGDDAPRLLL
+PAGDVHTLVALESFGPTQLAALASPVAALATARPEAAAGVGWVLPAGDAPALPGAVGHRE
+HAATADVVTDRLPGLRRVLVAGEYLPSGRAAVRWARQRGARVGVVQHGLLAVSTPPVPRD
+ATLYAFTSADADWWTQGRADVEAVAVGSALLEQARRAAPAPSDTAGDGPGVFLGQLHGAE
+LPRRDFAAAAEQYVRATGAAYRPHPAERDRLSRGQHAAWRRAGVRIDDAGAPLVATRGPV
+AAVFSTGILEAAQAGRPAWAVHPDPPAWLEGFWRRYGMTRWRPGRTPEPTPPLASPTADP
+AAAIAEHVWKESA
+>2_2274
+MTRAVAQPPLFWRAEQLDAWRRWQRTQWPLARRAADLVRGGVARSRGAVQAPDAGLRLLL
+PAGDVHTLIAVESAGPTQRAALVEPTRALAEGRTGLDAAARTRLLGGVAWVVPADVAGAL
+LPDLPAAAQLTGHAADPDTVGTRLAGLERVLVAGEYLPAGRAAVRWAHERGASVHVVQHG
+LLAVSTPPVPRDATLYAFTARDADWWTQGRADVRAVPVGSALLEAARRGAASADPTATGS
+TGPGPGLFLGQLHGAELPRAQFAAAAEQYVRTTGAVYRPHPAERDRLSRAQHARWEGAGI
+AVDRSGAPLTQTAGPVAAVFSTGILEAAQTGRPAWAVHPDPPRWLVEFWDRYGITRWMPG
+ADPTPTPALVAPTADPAAAIARDLWKEHA
+>3_212
+MTDAPLFWRSGDLPRWHAWQRAQWPLTRRAADTARSTVRGVAGALARRGSTGDDVPRLLL
+PPGDVHTLVALESFGPTQLAALASPVAALATARPEAAAGVGWVLPAGDAPALPGAAGHRE
+HAATADVVTDRLSGLRRVLVAGEYLPSGRAAVRWARQRGARVGVVQHGLLAVSTPPVPQD
+ATLYAFTSADADWWTQGRADVEAVPVGSALLEQARRTAPALSGAGDDGPGVFLGQLHGAE
+LPRRDFAAAAEQYVRATGAAYRPHPAERDRLSRGQHAAWRRAGVRIDDAGAPLVATRGPV
+AAVFSTGILEAAQAGRPAWAVHPDPPAWLEGFWRRYGMTRWRPGRVPEPTPPLASPTTDP
+AAAIAEHVWKESA
+>4_482
+MTDAPLFWRSEDLPRWHAWQRAQWPLTRRAADTARSTVRGVAGALTRRRSTGDDAPRLYL
+PAGDVHTLVALESFGPTQLAALASPVAALATARPEAAAGVGWVLPAGDAPALPGAVGHRE
+HAATADVVTDRLSGLRRVLVAGEYLPSGRAAVRWARQRGARIGVVQHGLLAVSTPPVPQD
+ATLYAFTSADADWWTQGRADVEAVPVGSVLLEQARRTAPALSGAGDDGPGVFLGQLHGAE
+LPRRDFAAAAEQYVRATGAAYRPHPAERDRLSRGQHAAWRRAGVRIDDAGAPLVATRGPV
+AAVFSTGILEAAQAGRPAWAVHPEPPAWLEGFWRRYGMTRWRPGRTPEPTPPLASPTADP
+AAAIAEHVWKESA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001642.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001642.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6078c1a04e45679ccae12393229a56699e59e73d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001642.fa
@@ -0,0 +1,30 @@
+>0_2395
+MAERVEPVRGEDGDDGSVAAPERRRSRLPGWASVLLNVVVAIAVVAVVQALWVKVYSVPS
+GSMEQTLEVGDRMLVNRTAYPDGMAASQDVVVFNANEDWAQPLPPEGPVENAVRTFGDIT
+GIGRSHDQALVKRVVGTEGQTVECCTSEGRVTVDGQPLDEPYLHNDLPFAPGRLDCESDV
+MSARCFGPITVPEDSMLVLGDHRSNSADSVIGCRGLPAEQAEGCARFVTREDVVGEVFVT
+IWPPSNWGGH
+>1_478
+MAERVEPAHGEDGGAVAAPQPHRPRLPFWASLLLNVVVALAVVAVVQALWVKVYSVPSGS
+MENTLEVGDRMLVNRTAYPDGAADAQDVVVFTANEDWAHPMPPEGAVENAVRTFGDLTGI
+GRSHEQALVKRVIGTAGQTVECCTAEGAVTVDGEPLDEPYIHNDLPFIRDELDCESEVMS
+ARCFGPVTVPEDSMLVLGDHRSNSADSVIACRGIPADQAGDCARFVTREDIVGEVFVTVW
+PPTHWGGH
+>2_2278
+MAHTPDAVPARDEAACDEAVRDDAAPAPASSAAAPGRRRRVQLPFWASVLLNVAVALLVV
+SVVQALWVKVYSVPSGSMEQTLQVGDRMLVNRTAYPDGVAERQDIVVFDANETWGVDTVG
+EEGPVEGAVRTFGDLTGIGRSHENALVKRVIGLPGETVECCTSQGAVTVGGTPLEEDYLY
+EDLPFVPGTLDCTTTPRSSRCFGPVTVPERSMLVMGDHRSNSADSVYQCRGLTAEQAGDC
+AHFVRDEDVVGRVFSTVWPPSNWSGH
+>3_208
+MAERVEPAHGEDGGAVAAPQPHRPRLPFWASLLLNVVVALAVVAVVQALWVKVYSVPSGS
+MENTLEVGDRMLVNRTAYPDGMADAQDVVVFTANEDWAHPMPPEGAVENAVRTFGDLTGI
+GRSHEQALVKRVVGTAGQTVECCTAEGAVTVDGEPVDEPYIHNDLPFIRDELDCESEVMS
+ARCFGPVTVPEDSMLVLGDHRSNSADSVIACRGIPADQAGDCARFVTREDIVGEVFVTVW
+PPTHWGGH
+>4_477
+MAERVEPAHGDDVDGGAVAAPQPHRPRLPFWASLLLNVVVALAVVAVVQALWVKVYSVPS
+GSMENTLEVGDRMLVNRTAYPDGAADSQDVVVFTANEDWAHPMPPEGAVENAVRTFGDLT
+GIGRSHEQALVKRVVGTAGQTVECCTAEGAVTVDGEPLDEPYIHNDLPFIRDELDCESEV
+MSARCFGPVTVPEDSMLVLGDHRSNSADSVIACRGIPADQVGDCARFVTREDIVGEVFVT
+VWPPTHWGGH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001643.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001643.fa
new file mode 100644
index 0000000000000000000000000000000000000000..726bc219b30277caf856c0cf90546b6715ccfe9f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001643.fa
@@ -0,0 +1,35 @@
+>0_2396
+MTELSRSEDKRLVLATGRAHPELAQEIAEELGTELLPMSAYDFANGEIYVRSGESVRGKD
+VFIIQSHPAPLNNHLMEQLIMVDSMKRASARRITVVSPFYPYARQDKKGRGREPISARLV
+ADLYKTAGASRVMSVDLHTAQIQGFFDGPVDHLFAIPLLADYIRTRVEGEEVTVVSPDTG
+RVRVAEQWADRLGGVPLGFVHKSRDLTVPNKAESKTVVGDVEGRVCVLIDDMIDTGGTIA
+GAVQILKEAGAKDVIIAATHAVFSEPAAQRLGECGAREVVVTNTLPILEEKRFETLTVLS
+IAPLIARAIREVFEDGSVTSLFDGDA
+>1_477
+MTELSRSEDKRLVLATGRAHPELAQEIAEELGTELLPMSAYDFANGEIYVRSGESVRGKD
+VFIIQSHPAPLNNHLMEQLIMVDSMKRASARRITVVSPFYPYARQDKKGRGREPISARLV
+ADLYKTAGASRVMSVDLHTAQIQGFFDGPVDHLFAIPLLADHIRSSVEGEEVTVVSPDTG
+RVRVAEQWADRLGGVPLGFVHKSRDLTVPNKAESKTVVGDVEGRVCVLIDDMIDTGGTIA
+GAVQILKDAGAKDVIIAATHPVFSDPAAQRLGECGAREVVVTNTLPIPEEKRFETLTVLS
+IAPLIARAIREVFEDGSVTSLFDGVA
+>2_2279
+MTELSRSEDKRLVLAAGRAHPGLAQEIAEALGTELLPMSAYDFANGEIYVRSGESVRGKD
+VFVIQSHPAPLNNHLMEQLIMVDSMKRASARRITVVSPFYPYARQDKKGRGREPISARLV
+ADLYKTAGASRVMSVDLHTAQIQGFFDGPVDHLFAIPLLADYIRGQVEGEKVTVVSPDTG
+RVRVAEQWADRLGGVPLGFVHKSRDLTVPNKAESKTVVGDVEGRVCVLIDDMIDTGGTIA
+GAVRILKEAGAKDVIIAATHAVFSDPAAQRLGESGAREVVVTNTLPIPEEKRFDNLTVLS
+IAPLIARAIREVFEDGSVTSLFDGDA
+>3_207
+MTELSRSEDKRLVLATGRAHPELAQEIAEELGTELLPMSAYDFANGEIYVRSGESVRGKD
+VFIIQSHPAPLNNHLMEQLIMVDSMKRASARRITVVSPFYPYARQDKKGRGREPISARLV
+ADLYKTAGASRVMSVDLHTAQIQGFFDGPVDHLFAIPLLADHIRSSVEGEEVTVVSPDTG
+RVRVAEQWADRLGGVPLGFVHKSRDLTVPNKAESKTVVGDVEGRVCVLIDDMIDTGGTIA
+GAVQILKDAGAKDVIIAATHAVFSDPAAQRLGECGAREVVVTNTLPIPEEKRFETLTVLS
+IAPLIARAIREVFEDGSVTSLFDGVA
+>4_476
+MTELSRSEDKRLVLATGRAHPELAQEIAEELGTELLPMSAYDFANGEIYVRSGESVRGKD
+VFIIQSHPAPLNNHLMEQLIMVDSMKRASARRITVVSPFYPYARQDKKGRGREPISARLV
+ADLYKTAGASRVMSVDLHTAQIQGFFDGPVDHLFAIPLLADHIRSSVEGEEVTVVSPDTG
+RVRVAEQWADRLGGVPLGFVHKSRDLTVPNKAESKTVVGDVEGRVCVLIDDMIDTGGTIA
+GAVQILKDAGAKDVIIAATHPVFSDPAAQRLGECGAREVVVTNTLPIPEEKRFETLTVLS
+IAPLIARAIREVFEDGSVTSLFDGVA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001649.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001649.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9d14aac86a0e3f5a0de90baf27eb6cd99970e9e2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001649.fa
@@ -0,0 +1,35 @@
+>0_2403
+MAHASETPLAYRAPAQQPDDDGGPRRDAREEKSGRRRRLEFPPAPEPLPVPVVDNHTHLD
+FRDGLVRVDVHQAMDAAEAVGVVGAVQVGCDVASARFTIAAIEAEPRLLGAVALHPNDAA
+RLAERGEFEEAFAQIAELARHPRVRAVGETGLDYFRTQDETGHAAQQESFRRHIRLAREL
+GTALQIHDRDAHDDVVRILLEEAAEGGLPPHVVFHCFSGGPELARTCAEHGWHMSFAGPV
+TFKANDELREALRIAPAELLLVETDAPFLTPHPHRGRPNAPYLVPLTLRGMAETRGDDVD
+ALARAVSENTARVYGSF
+>1_468
+MAHASETPLAYRAPAQQPDDDGGPRRDAHEEKSGRRRRLEYPPAPEPLPVPVVDNHTHLD
+FRDGLVRVDVHQAMDAAEAVGVTGAVQVGCDIASARFTIAAIEAEPRLLGAVALHPNDAA
+RLAERGEFEEAFAQIAELARHPRVRAVGETGLDYFRTQDEAGHAAQQESFRRHIRLAREL
+GTALQIHDRDAHDDVVRILLEEAADGGLPPHVVFHCFSGGPDLARTCAEHGWHMSFAGPV
+TFKANDELREALRIAPAELLLVETDAPFLTPHPHRGRPNAPYLIPLTLRGMAETRGDDVA
+ALARAVSENTARVYGSF
+>2_2286
+MATTTSAQSASTQSASTEPGIPSAYRPPATPADLGDGPARDTREEKSGRKRRLEYPPAPE
+PLPVPVVDNHTHLDFRDGLVRVDVHQAMDAAEAVGVVGAVQVACDVESARFTVEAIEAES
+RLLGAVALHPNDAARLTARGEFEEAFAVIAELAEHPRVRAVGETGLDFFRTTDEAGHAAQ
+EESFRRHIRLARELGKALQIHDRDAHDDVVRVLLEEEADGGLPPHVVFHCFSGGPDLART
+CAERGWHASFAGPVTFKANDDLRDALRLLPRELVMVETDAPFLTPHPHRGRPNAPYLIPV
+TLRGMAEARGEEVAELAAAVAENTARVYGEF
+>3_198
+MAHASETPLAYRAPAPQPDDDGGPRRDAHEEKSGRRRRLEYPPAPEPLPVPVVDNHTHLD
+FRDGLVRVDVHQAMDAAEAVGVTGAVQVGCDVASARFTIAAIEAEPRLLGAVALHPNDAA
+RLAERGEFEEAFAQIAELARHPRVRAVGETGLDYFRTQDETGHAAQQESFRRHIRLAREL
+GTALQIHDRDAHDDVVRILLEEAADGGLPPHVVFHCFSGGPDLARTCTEHGWHMSFAGPV
+TFKANDELREALRTAPAELLLVETDAPFLTPHPHRGRPNAPYLIPLTLRGMAETRGDDVD
+ALARAVSENTARVYGSF
+>4_467
+MAHASETPLAYRAPAQQPDDDGGPRRDAREEKSGRRRRLEYPPAPEPLPVPVVDNHTHLD
+FRDGLVRVDVHQAMDAAEAVGVVGAVQVGCDVASARFTIAAIEAEPRLLGAVALHPNDAA
+RLAERGEFEEAFAQIAELARHPRVRAVGETGLDYFRTQDEAGHAAQQESFRRHIRLAREL
+GTALQIHDRDAHDDVVRILLEEAADGGLPPHVVFHCFSGGPELARTCAEHGWHMSFAGPV
+TFKANDELREALRIAPAELLLVETDAPFLTPHPHRGRPNAPYLIPLTLRGMAETRGDDVD
+ALARAVSENTARVYGSF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001655.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001655.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7a3d1c6e5a1432f973eafa4eb59b1e9b6889d045
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001655.fa
@@ -0,0 +1,16 @@
+>0_2411
+MRRCSKTGCQSPALATLTYNYADSQVVIGPLSRLAEPHTYDLCAEHARRTTAPRGWEVLR
+LELPGHYEAVAPDGTVHTVPTAPRAVPAAPPADVASRPSLAAPRPAPAVPPVDADEPEAP
+APPTRPGLRLVRDDDPLPPA
+>1_460
+MRRCSKTGCQSPALATLTYNYADSQVVIGPLSRRAEPHTYDLCGEHARRTTAPRGWEVLR
+LELPEHYEAVDADGGVRTVPTRPMAVPPARPGLRVVRDGD
+>2_2294
+MRRCSKTGCQEPAEATLTYNYAGSQVVIGPLAQRAEPHAYDLCAAHAARTTAPRGWEVLR
+LAPAAPAAPGVAAPTHPALRLVTDPVEGTAG
+>3_187
+MRRCSKTGCQSPALATLTYNYADSQVVIGPLSRRAEPHTYDLCGEHARRTTAPRGWEVLR
+LELPEHYEAVDADGGVRTVPTRPMAVPPARPGLRVVRDGD
+>4_460
+MRRCSKTGCQSPALATLTYNYADSQVVIGPLSRRAEPHTYDLCGEHARRTTAPRGWEVLR
+LELPEHYEAVDADGGVRTVPTRPMAVPPARPGLRVVRDGD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001661.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001661.fa
new file mode 100644
index 0000000000000000000000000000000000000000..49db80c23c71060073a8eb88f396d56913ace5b6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001661.fa
@@ -0,0 +1,52 @@
+>0_2417
+MSPATGSVPAGHAQPDPLRDPRVASPTERTRRALILTLLTLFVPGGAQVVAGSRPLGRAA
+LRVTVAVWGVLLAGLLWWLVHRASLISLLARDGVLLVLAIALGLLAVGWAVLWIDTLRLI
+RLHLLAPGARKATAVATVLALVLTSGALLYGGWATNAGRGALGSVFGDGPAVARTEGRYN
+ILVMGGDAGEGREGLRPDSIHVASVDARSGAVVMFSLPRNLQNAPFTEGSPLWGVYPDGF
+SCGDECILNALYTDVETNHPDLYPDAENPGAEAMMDAAGGILGLEISGYALMDMGGFAQL
+IDAMGGVDLVTGGYVVHRGVRPDGEWGNIWWEPGEHHFDGKDALAFARSRHWSTDYARIR
+RQQCMQAAMLAQFSPGTVLTRFEQILDAGQQIVTTSLPQSQLGTFVDLAERSRGQKMRRL
+TIGPPDFGDTRDQFTTFPDYDLVHERVDEMLAEEPGQAGGATGGEAGHAAGVGSGASALP
+LLTVLAVAAQEAVPDEVDEDDPATWPAPPTRPDGGAYTAEDLMLAEDLGQEDLLNHASST
+NGLCAPGR
+>1_453
+MSSATGSVPAGHAQPDPLRDPRVASPTERTRRALILTALTLLVPGGAQLVAGSRRLGRVA
+LRVTVTVWAVLILGLLWWLVSRASLISLMARDGVLLGLAVVLAALAVGWAVLWVDTFRLI
+RPHLLAPGARKITAAVTALALVLTSGALLYGGWAANTSRGALGEVFQEGPAVPEAEGRYN
+ILVLGADAGEGRQGLRPDSMHVVSVDARTGAIVMFSLPRNLQNAPFVEGSPLWDVYPNGF
+DCGDECILNALYTDVEEHHADLYPDAEHPGAEAMKDAAGGILGLDVSGYALMDMGGFAQL
+IDAMGGVDVVSGGYVVHRGVRPDGAWGNIWWEPGTHHFNGDDALAFARSRHWSTDYARIR
+RQQCMQAAMLEQFSPATVLTRFEGILAAGQQIVTTDLPQSQLGTFADLAERSRGQKMRRL
+TIGPPDFGDTGTHFTTYPDYDLVHRRVDEMLADESVTAGSEPTGVSATPLLTVLAVVAQE
+TQTPDVDEDDPATWPAPPTRTDGEPFTAEDLMTAEDLGQEDVLNHASSTNGLCVPAP
+>2_2301
+MPASAASSPVLTRDPVRDPRQATGPERRRRAGILLLLTLLVPGGAQAVAGSRRWGRIALR
+VTLAVWAAVLLALVLALTARAALVSVLANPVVLVLLGVVLVTLAIGWGLLWVDTFRLIRV
+HLLGPRARAATAAATVVALVVTSGGLGYTAWMTQSGRGALGSIFGSGPAIEAADGRYNIL
+VMGGDAGEDRVGLRPDSMHVASVDAETGAVTLFSLPRNLQNAPFTPDSPLWQAYPNGFDC
+GDDCILNALYMDVEEKHKDLYPDAEHPGAEAMMDAAGGVLGLEITGYAMMDMAGFAQLVD
+AMGGVDVVSGGYVTHRGARPDGTWGDIWWEPGTHHFGGDDALAFARSRKFATDYARIRRQ
+QCMQAAMLQQFTPATVLTRFEGIVSAGTQIVTTNVPQSQLGTFVDLADRSRGYRMARLTI
+GAPDFGTANDRFTTRPDYDLVHRRVAELLDEEPTKAGSASTAAPAASPGATPLLALTAAI
+PAPLLVAEASPAATGTGGTTRPGVDPDDPSTWPSAPTGPNGEPYSAMELMRIQDAGDEAQ
+LVRIASTNDLCAPGG
+>3_180
+MSPATGSVPAGHAQPDPLRDPRVASPTERTRRALILTALTLLVPGGAQLVAGSRRLGRVA
+LRVTVTVWAVLILGLLWWLVSRASLISLMARDGVLLGLAVVLAALAVGWAVLWVDTFRLM
+RPHLLAPGARKITAAVTALALVLTSGALLYGGWAANTSRGALGEVFQEGPAVPEAEGRYN
+ILVLGADAGEGRQGLRPDSMHVVSVDARTGAIVMFSLPRNLQNAPFVEGSPLWDVYPNGF
+DCGDECILNALYTDVEEHHADLYPDAEHPGAEAMKDAAGGILGLDVSGYALMDMGGFAQL
+IDAMGGVDVVSGGYVVHRGVRPDGAWGNIWWEPGTHHFNGDDALAFARSRHWSTDYARIR
+RQQCMQAAMLEQFSPATVLTRFEGILAAGEQIVTTDLPQSQLGTFADLAERSRGQKMRRL
+TIGPPDFGDTGTHFTTYPDYDLVHRRVDEMLADESATAGSEPTGVSATPLLTVLAVVAQE
+TEAPDVDEDDPATWPAPPTRSDGEPFTAEDLMTAEDLGQEGVLNHASSTNGLCVPAP
+>4_453
+MSSATGSVPAGHAQPDPLRDPRVASPTERTRRALILTALTLLVPGGAQLVAGSRRLGRVA
+LRVTVTVWAVLILGLLWWLVSRASLISLMARDGVLLGLAVVLAALAVGWAVLWVDTFRLI
+RPHLLAPGARKITAAVTALALVLTSGALLYGGWAANTSRGALGEVFQEGPAVPEAEGRYN
+ILVLGADAGEGRQGLRPDSMHVVSVDARTGAIVMFSLPRNLQNAPFVEGSPLWDVYPNGF
+DCGDECILNALYTDVEEHHADLYPDAEHPGAEAMKDAAGGILGLDVSGYALMDMGGFAQL
+IDAMGGVDVVSGGYVVHRGVRPDGAWGNIWWEPGTHHFNGDDALAFARSRHWSTDYARIR
+RQQCMQAAMLEQFSPATVLTRFEGILAAGQQIVTTDLPQSQLGTFADLAERSRGQKMRRL
+TIGPPDFGDTGTHFTTYPDYDLVHRRVDEMLADESVTAGSEPTGVSATPLLTVLAVVAQE
+TQTPDVDEDDPATWPAPPTRTDGEPFTAEDLMTAEDLGQEDVLNHASSTNGLCVPAP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001662.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001662.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3a4b303260f8e7f17db44f416d002137305304b4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001662.fa
@@ -0,0 +1,40 @@
+>0_2419
+MHVLKPVIRDYAWGSPTLLARLQGREPTGRPEAEIWLGDHPGAPCGVVVGDGSVTGLDEL
+TAADRERCLGPNVDTDRLPYLAKLLAAGAPLSIQAHPTLEQARAGFAAEEAAGVPVDAPH
+RNYKDANHKPEMLVALTHFSAMCGFRSPEVSSDSFEALAHALTEHADGDTSAVAVAAARI
+SQTLAAGDLEDAFTAILDPESVWAAPGSVAQVVEVLRAAEDLAERDPSLATALEVAEHYP
+DDPGVIVAILLNRVDLAPGQALHLPAGNVHAYLHGLGVEVMAASDNVLRGGLTAKHVDVE
+ELRRVVTFEAVPVPSTEPERVADSVVAFRPPFDEFELLQATLEDDAVRELDVHGPGIAVV
+TRGSAHLGLAGQEVTLGPGESVFLPAAETATGPLAVRAADGAPATVHVTDLPRR
+>1_452
+MHVLKPVIRDYAWGSPTLLADLQGREPTGRPEAELWLGDHPGAPCVAVVADGARVGLDEV
+VAADPERCLGPAAPEGRLPFLMKLLAAGAPLSIQAHPTLEQARAGFAAEEAAGVPVDAPQ
+RNYKDANHKPEMLLALTPFAAMCGFRSPEVSSDSFEALARALTERADGDTSAVAVAAARI
+SQALAAGDLEDAFTSILDPDSVWGAPGAVAQVVDVLRAAPDLAERDPSLATALEAAQHHP
+DDPGVVVAILLNRVDLAPGQAIHLPAGNVHAYLHGLGVEVMAASDNVLRGGLTPKHMDVP
+ELRRVVTFEALPVPSTEPERVADSVVAFRPPFEEFELLQATLEDDAVHGLDVHGPGIAVV
+TRGTASLALAGQEIELGPGEAVFLPAAETASGPLAVRAAAGAPATVHVAGLPRG
+>2_2302
+MHLLEAVVRDYAWGSPTLLAELEGREPSGAPEAEKWLGAHPGAPCTVSGPEGRCGLDELI
+AADPAPMLGEAARFGRLPYLMKLLAAGRPLSIQAHPTRERARAGFAAEEAAGVPVDAPHR
+NYKDDNHKPEMIVALTPFSALCGFRRPEDAAATFERMADALAEWADGDATDVGIAARRIA
+AHLAAEDVEAAFADILDPDAVWSAGGVDRLIEAVRAQPDLVAHDPALATALEVAEQCPGD
+PGVLVTLLLNRVDLVPGQAVHLPAGNVHAYLHGLGVEVMAASDNVLRGGLTPKHVDVPEL
+RRVVAFAPLPVPYTDPVEDGAGVVRYRPPFEEFELTRLAADAGGPSAEARVAGPAIAVAV
+DGPAVLACGADAVRLEAGAAVFLPAEETAAAPLTLSPATDDAPARVFVAALPTA
+>3_179
+MHVLKPVIRDYAWGSPTLLADLQGREPTGRPEAELWLGDHPGAPCVAVVADGAHIGLDEV
+VAADPERCLGPAAPEGRLPFLMKLLAAGAPLSIQAHPTLEQARAGFAAEEAAGVPVDAPE
+RNYKDANHKPEMLLALTPFSAMCGFRSPEVSSDSFEALARALTERADGDTSAVAVAAARI
+SQALAAGDLEDAFTSILDPDSVWGAPGAVAQVVDVLRAAPDLAERDPSLATALEAAQHHP
+DDPGVVVAILLNRVDLAPGQAIHLPAGNVHAYLHGLGVEVMAASDNVLRGGLTPKHVDVP
+ELRRVVTFEALPVPSTEPERVADSVVAFRPPFEEFELLQATLEDDAVHGLDVHGPGIAVV
+TRGTARLVLAGQEIELGPGEAVFLPAAETASGPLAVRAAAGAPATVHVAGLPRG
+>4_452
+MHVLKPVIRDYAWGSPTLLADLQGREPTGRPEAELWLGDHPGAPCVAVVADGARVGLDEV
+VAADPERCLGPAAPEGRLPFLMKLLAAGAPLSIQAHPTLEQARAGFAAEEAAGVPVDAPQ
+RNYKDANHKPEMLLALTPFAAMCGFRSPEVSSDSFEALARALTERADGDTSAVAVAAARI
+SQALAAGDLEDAFTSILDPDSVWGAPGAVAQVVDVLRAAPDLAERDPSLATALEAAQHHP
+DDPGVVVAILLNRVDLAPGQAIHLPAGNVHAYLHGLGVEVMAASDNVLRGGLTPKHVDVP
+ELRRVVTFEALPVPSTEPERVADSVVAFRPPFEEFELLQATLEDDAVHGLDVHGPGIAVV
+TRGTASLALAGQEIELGPGEAVFLPAAETASGPLAVRAAAGAPATVHVAGLPRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001665.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001665.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c14ddcd3c38303692dcb47f7667538e03b342fa0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001665.fa
@@ -0,0 +1,25 @@
+>0_2422
+MSTENTATAAAAAHDDGAAGSRPTPQEAWETLAEGNRRFVAGDPGHPNQNAERRSTLTSG
+QEPIAVIFGCSDSRLAAEIIFDVGLGDVFVIRTAGQVIDDAVLGSLEYSVDVLKIPLIVV
+LGHDSCGAVTATVESYISGDMPPGFIRSLVERITPSVLAGRRRGLEEIDDFVAEHVDQTC
+DRLVETSQAVRDAVEAGRTAVVGLTYSLAGGTAQPGRVLGALQV
+>1_449
+MTPHTRPETTPAPDVVVPTSDLTPAEAWEVLAEGNRRFVAGEPSHPNQNAERRSDLTAGQ
+APVAVIFGCADSRLAAEIIFDLGLGDVFVVRTAGHVIDDAVLGSIEYGVDVLEIPLVIVL
+GHNSCGAVTATVESYISGTMPRGFVRPLVERIIPSVLAGRRRGLEEVDEFVAEHVDQTCD
+HLLETSQSVRAAVESGRTAVVGLTYSLSEGTARPGRVHGDLAV
+>2_2305
+MTTAAETTPARPTPAEAWRTLQEGNRRFVAGTPGHPNQDSERRHGLTEGQAPIAVIFGCA
+DSRLAAEIIFDVGLGDVFVVRTAGHVVDDAVLGSLEYAVDSLDVPLIIVLGHDSCGAVTA
+TVESYISGTMPAGFVRSLVERITPSVLAGRRRGLEEVDDFVAEHVDQTCDRLLETSQSVR
+AAVEAGRTAVVGLTYSLAEGTASPGRVHGRIEA
+>3_176
+MTPHTRPETTPAPDVVVPTSDLTPAEAWEVLAEGNRRFVAGEPSHPNQNAERRSDLTAGQ
+APVAVIFGCADSRLAAEIIFDLGLGDVFVVRTAGHVIDDAVLGSIEYGVDVLEIPLVIVL
+GHNSCGAVTATVESYISGTMPRGFVRPLVERIIPSVLAGRRRGLEEVDEFVAEHVDQTCD
+HLLETSQSVRAAVESGRTAVVGLTYSLSEGTARPGRVHGDLAV
+>4_449
+MTPHTRPETTPAPDVVVPTSDLTPAEAWEVLVEGNRRFVAGEPSHPNQNAERRSDLTAGQ
+APVAVIFGCADSRLAAEIIFDLGLGDVFVVRTAGHVIDDAVLGSIEYGVDVLEIPLVIVL
+GHNSCGAVTATVESYISGTMPRGFVRPLVERIIPSVLAGRRRGLEEVDEFVAEHVDQTCD
+HLLETSQSVRAAVESGRTAVVGLTYSLSEGTARPGRVHGDLAV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001666.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001666.fa
new file mode 100644
index 0000000000000000000000000000000000000000..dff821d441b1abbb8bd630a9a06e9f28dff17bba
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001666.fa
@@ -0,0 +1,45 @@
+>0_2423
+MTAQNPEQQFRIEHDTMGEVKVPIDALYRAQTQRAVENFPISGKGLEPAHIHALAQVKKA
+AAKANAELGVISQERADAIVAAADQVIAGEHDDQYPIDVFQTGSGTSSNMNTNEVLATLA
+TRALKDAGSEDEVHPNDHVNASQSSNDVFPTSVHVAVTGALINELIPALDHLAVSLEKKE
+KAFANIVKSGRTHLMDATPVTLGQEFGGYAAQVRYGIERVESSLPRVAEVPLGGTAVGTG
+INTPKGFSARVIELLAEETGLPLTEARNHFEAQANRDGLVEASGQLRNVAYSIMKINNDL
+RWMGSGPNTGLGEIFIPDLQPGSSIMPGKVNPVICEAAIMVCAQVIGNDTTVSLSSTNGA
+FELNVGIPVMAANLLESIRLLANTSRVMADKMIDGIEANEERCAFLAGASPSIVTPLNKV
+IGYEAAAKIAKHAVANKMTVREAVVDLGYVERGEITEEQLDTALDTMSMTHPE
+>1_448
+MTAENTDQQFRIEHDTMGEVKVPVNALYRAQTQRAVENFPISGKGLEPAHIHALAQVKKA
+AAKANAELGIISQERADAIVAAADQVIAGDHDDQYPIDVFQTGSGTSSNMNTNEVLATLA
+TRALKEAGSEDEVHPNDHVNASQSSNDVFPTSVHVAVTAALVNDLVPALDHLAVSLEKKA
+EAFAGVVKSGRTHLMDATPVTLGQEFGGYAAQVRYGIERIQSALPRVAEVPLGGTAVGTG
+INTPKGFSARVIELLAEETGLPLTEARNHFEAQANRDGLVEASGQLRNIAFSLMKINNDL
+RWMGSGPNTGLGEIAIPDLQPGSSIMPGKVNPVICEAAIMVCAQVIGNDTTVALSSTNGA
+FELNVGIPVMAANLLESIRLLANTTRVMADKMIDGIEANEERCAFLAGASPSIVTPLNKV
+IGYEAAAKIAKHAVANKMTVREAVVDLGYVERGEITEEQLDKALDTMSMTHPE
+>2_2306
+MTAQNTEQQFRIEHDTMGEVKVPVDALYRAQTQRAVENFPISGKTLEPAHIHALAQIKKA
+AAKANAELGVISQERADAIVAAADEVISGKHDGEYPIDVFQTGSGTSSNMNTNEVLATLA
+TRRLKDAGSSEEVHPNDHVNASQSSNDVFPTSVHVAVTGALVNDLKPALEHLAESLERKA
+EEFQGIVKSGRTHLMDATPVTLGQEFGGYAAQVRYGIERIEASLPRVAEVPLGGTAVGTG
+INTPQGFSARVIELLAEETGLPITEARNHFEAQANRDGLVEASGQLRNIAYSFIKINNDL
+RWMGSGPNTGLGEIALPDLQPGSSIMPGKVNPVICEAAIMVAAQVIGNDTTISLSSTNGA
+FELNVGIPVMAANLLESIRLLANTSRVMADKMIDGIEANEERCTFLAGASPSIVTPLNKV
+IGYEAAAAIAKHAVKNKMTVREAVVDLGYVERGEVTEEQLDKALDTMSMTHPGE
+>3_175
+MTAENTDQQFRIEHDTMGEVKVPVNALYRAQTQRAVENFPISGKGLEPAHIHALAQVKKA
+AAKANAELGIISQERADAIVAAADQVIAGDHDDQYPIDVFQTGSGTSSNMNTNEVLATLA
+TRALKEAGSEDEVHPNDHVNASQSSNDVFPTSVHVAVTAALVNDLVPALDHLAVSLEKKA
+EAFAGVVKSGRTHLMDATPVTLGQEFGGYAAQVRYGIERIQSALPRVAEVPLGGTAVGTG
+INTPKGFSARVIELLAEETGLPLTEARNHFEAQANRDGLVEASGQLRNIAFSLMKINNDL
+RWMGSGPNTGLGEIAIPDLQPGSSIMPGKVNPVICEAAIMVCAQVIGNDTTVALSSTNGA
+FELNVGIPVMAANLLESIRLLANTTRVMADKMIDGIEANEERCAFLAGASPSIVTPLNKV
+IGYEAAAKIAKHAVANKMTVREAVVDLGYVERGEITEEQLDKALDTMSMTHPE
+>4_448
+MTAENTDQQFRIEHDTMGEVKVPVNALYRAQTQRAVENFPISGKGLEPAHIHALAQVKKA
+AAKANAELGIISQERADAIVAAADQVIAGDHDDQYPIDVFQTGSGTSSNMNTNEVLATLA
+TRALKEAGSEDEVHPNDHVNASQSSNDVFPTSVHVAVTAALVNDLVPALDHLAVSLEKKA
+EAFAGVVKSGRTHLMDATPVTLGQEFGGYAAQVRYGIERIQSALPRVAEVPLGGTAVGTG
+INTPKGFSARVIELLAEETGLPLTEARNHFEAQANRDGLVEASGQLRNIAFSLMKINNDL
+RWMGSGPNTGLGEIAIPDLQPGSSIMPGKVNPVICEAAIMVCAQVIGNDTTVALSSTNGA
+FELNVGIPVMAANLLESIRLLANTTRVMADKMIDGIEANEERCAFLAGASPSIVTPLNKV
+IGYEAAAKIAKHAVANKMTVREAVVDLGYVERGEITEEQLDKALDTMSMTHPE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001673.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001673.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3731984c0a5a6acbc27cf1f36723a77db905e2ef
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001673.fa
@@ -0,0 +1,20 @@
+>0_2430
+MSHHAHAVHAQDPTLANRYGTDQDRPSRRRLWVGLGVLGLLGAVLLAVWLGLNLSVGNIE
+YKDVGYTIEDDGNATVTFQVLVPEGVQAECDVLVMDSHAAPVGFRTVRLVSVPQDQRDTP
+SDAQQVYTVDVRTVVRGDSGVVEACRKL
+>1_440
+MSHHAPAVRAQDPTLANRYGTDHTRPGRRRLWAGLGGLGLVVAVLLSVWIGLNMSVGAIE
+YKDVGFTIEDDGHATVTFQASVPEGVQAECDVLVTDSHAAPVGFRTVRLETLPADRRDSP
+SDAQQRYTVDVRTVVRGDSGVVETCRKV
+>2_2314
+MSSTPAPAASAPETTLATRYGVGQRRDRRRLWTVLGAVALVLAVATAVAVALGNSVGRVE
+AEDVGYRIDDAAHAAVTFQVTLPRGVEAAACDLKVMDARYAPVGFHTVRVSAGPDHPAGE
+TVTYTADVRTVGRGVTGVVEGCRPA
+>3_167
+MSHHAPAVRAQDPTLANRYGTDHTRPGRRRLWAGLGGLGLVVAVLLSVWIGLNMSVGAIE
+YKDVGFTIEDDGHATVTFQASVPEGVQAECDVLVTDSHAAPVGFRTVRLETLPADRRDSP
+SDAQQRYTVDVRTVVRGDSGVVETCRKV
+>4_440
+MSHHAPAVRAQDPTLANRYGTNHTRPGRRRLWAGLGGLGLVVAVLLSVWIGLNMSVGAIE
+YKDVGFTIEDDGHATVTFQASVPEGVQAECDVLVTDSHAAPVGFRTVRLETLPADRRDSP
+SDAQQRYTVDVRTVVRGDSGIVETCRKV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001675.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001675.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c1d399e7690e7a6c9420c6b71e8986f6f86a596d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001675.fa
@@ -0,0 +1,25 @@
+>0_2432
+MLTAEKTHLLLTREDGRSESPSHHGVALAAAALADYRAAGIVTVEDAPVDRARVLVTAAG
+VTGHPVLDARLGKVDALAGTPVTAAVAAGRPNLRKAVIARLTETGDLAEHKAFMATRHLP
+RGGTRAELLDRLTAVVLDEREATDEDVLLLGVLQHLNLAWRLLPGTHERYGRRELVRRVE
+SLTRSDLLVQAVRRAVGGTAAAVTAAAAGSLA
+>1_438
+MLTVEKAHLLLTREDGRSESPSHHRVALAAAALADHRSAGIVTLEDVPVDRARVLVTAAG
+TTGDPVLDSSLGQVDALAGRPLVSTVAAGKPDLRKAVVAHLTETGRLTERKAFLATRHVP
+RGTERTELLAHLTAVVLDEAEPCDEDVLLLGVLQHLNLARRLLPGAHERYDRREMVRRIE
+TLTREDLLVQAVRRAVGGTCGTVTAAAAGSVA
+>2_2316
+MLTSEKLHLLLTREDGRSLSPSHHGVALAAAVLADLRDAGIVSLEDAPVSRARVLVTGAG
+STDHPVLDALLPELDGLRGKKVAAVVGKGRPKARKPVVAHLVETGELVEHKALLNTRHTP
+VGPGRPALVAGLTSALDGDSPSDEDRLLLGVLHQLNVLRRVLPEAGAEGESRREQSRRLE
+RLTHDDLLVQAVGRTVSTAAAAAAAAG
+>3_165
+MLTVEKAHLLLTREDGLSESPSHHRVALAAAALADHRSAGIVTLEDVPVDRARVLVTAAG
+TTGDPVLDSSLAQVDALAGRPLVSTVAAGKPDLRKAVVAHLTETGCLTERKAFLATRHVP
+RGTERTELLAHLTAVVLDEAEPSDEDVLLLGVLQHLNLARRLLPGAHERYDRREMVRRIE
+ALTREDLLVQAVRRAVGGTCGTVTAAAAGSAA
+>4_438
+MLTVEKAHLLLTREDGLSESPSHHRVALAAAALADHRSAGIVTLEDVPVDRARVLVTAAG
+TTGDPVLDSSLGQVDALAGRPLVSTVAAGKPDLRKAVVAHLTETGRLTERKAFLATRHVP
+RGTERTELLAHLTAVVLDEAEPSDEDVLLLGVLQHLNLARRLLPGAHERYDRREMVRRIE
+ALTREDLLVQAVRRAVGGTSGTVTAAAAGSAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001680.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001680.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9b9cd037ef7d4d4db324ddc3761d6c8cce5d05a2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001680.fa
@@ -0,0 +1,45 @@
+>0_2449
+MSLTPELSPKPRLLIVGGGYAGFHIAKELQKKVKDAGGVVTVVDPLPYMTYQPFLPEVVG
+GHIDGRNVVVDHATHLKDAEVLRGTVVKVEHARRVATVRGEDGHEFEVPYQDVVMTAGAT
+TRVFPIAGLGEHGIGLKTVEEAEALRNQILERLDAASLMVDAEARRRALTFVVVGGGFAG
+VETVGEMEHLIRTAVSRDPRVSQSEVRIALVEAMGRIMPEVSEDQAAGVVEHLKDRGIEV
+LLNTSLGDATDGIMTLVDMKDKSEKEKFGADTLVWTAGVAANSVAKQTDFPVEERGRIEV
+TATLQVKDGQGGVLEGAWGCGDVCAVPDLTGAGPGGFCVPNAQHAGRQAKQLAANYLAVR
+HGEGEVQEYVHKSLGTVAGLGFFKGVGNPLGVKISGPAAFLAHRGYHAYAMPTLDRRFRI
+FAGWVAETLFGRDSTSVEGQDRPFNAFRRAAGVELEPGRFERKRALESSKG
+>1_430
+MSLTPELSPKPRLLIVGGGYAGFQLAKELQTKVKDRGGVVTVVDPLPYMTYQPFLPEVVG
+GHIVGRNVVVDLATHLKDAEVLRGTVVKVEHARRVATVRGEDGHEFELPYQDIAMTAGAT
+TRVFPIKGLGEHGIGLKTVEEAVTLRNQILERLDAASLMVDAEARRRALTFVVVGGGFAG
+IETVGEMEHLIRTAVARNPRLSQSEVRIVLVEAMGRIMPEVGEDQAVGVVEHLKDRGIEV
+LLNTSLGDATDGIMTLVDMKDKSEKEKFGADTLVWTAGVAANAVAKQTDFPVEERGRIEV
+TPTLQVKDGENGVFEGAWGCGDVCAVPDLTGAGPGGFCVPNAQHAGRQAKQLAANYMAVR
+HGEGEVQEYVHKSLGAVAGLGFFKGVGNPLGVKISGPAAFLAHRGYHAYAMPTLDRRFRI
+LSGWVAETLFGRDSTSVAGLDTPFNPFRRAAGVELEPGRFERQRALESSKG
+>2_2321
+MSITPDLSPKPRLLVVGGGYAGFHIAQTLQSKVKDRGGVVTVVDPRPYMTYQPFLPEVVG
+GHIEGRHVIVDLQTHLKDTEVVRGAVTKVEHARKVAVVRGEDGAEFEVPYQDIVMTAGAN
+TRVFPIPGLAEQGIGLKTVEEAVALRNQILERLDAAALMTDAEQRRAALTFVVVGGGFAG
+IEAIAEMENLIRTAVSRNENLSQTEVRIVLVEAMGRIMPEVSEDQAQAVVAHLKGRGIEV
+LLNTSLGDATGGVMKLVNMADKSEADSFRADTLVWTAGVAANGVAKQTDFPVEDRGRIEV
+TPTLQIKDGEGVLEGAWACGDVAAVPDLTGAGPGGFCVPNAQHAGRQAAQLAKNYMAVRH
+GEGEVQEYVHKSLGAVAGLGFLKGVGNPMGVKLFGVPAFLAHRGYHAYAMPTLERRFRIV
+SGWIAETLFGRDSTSVDGQETPFNAFRVAAGAEPVPSTLEKKRAGELAAK
+>3_160
+MSLTPELSPKPRLLIVGGGYAGFHVARELQKKVAERGGVVTVVDPRPYMTYYPFLPEVVG
+GHIEGRHVNVDLQTHLKDAEVVRGAVVSVDHAGRTAVVRGEGGDEFEIPYQDIVMTAGAV
+TRVFPIPGLGEQGIGLRSVEEAVQLRNQILERLDAGSLMTDAEERKRALTFVVVGGGFAG
+IEAIAEMENLIRNAVERNERLSQSEIRIVLVEAMGRIMPEVSEEQAQGVVEHLKDRGIEV
+LLNTSLGDATDGVMKLVAMPSKEEAETFAADTLVWCAGVVANSVVKSTDFPVDDRGRVEA
+TPTLQIKDGEAGALEGAWACGDVSAVPDLTGAGPGGFCVPNAQHAIRQAKRLAANYMAVR
+HGEGEVQEYVHKSLGTVAGLGFGRGVGNPLGTKIAGIPAFLAHRGYHGYAMPTLERKFRI
+LSGWVAETLFGRDSTSVAGLDTPFNPFRRAAGVELEPGRFERQRALESSKG
+>4_433
+MSLTPELSPKPRLLIVGGGYAGFHVARELQKKVAERGGVVTVVDPRPYMTYYPFLPEVVG
+GHIEGRHVNVDLQTHLKDAEVVRGAVVSVDHAGRTAVVRGEGGDEFEIPYQDIVMTAGAV
+TRVFPIPGLGEQGIGLRSVEEAVQLRNQILERLDAGSLMTDAEERKRALTFVVVGGGFAG
+IEAIAEMENLIRNAVERNERLSQSEIRIVLVEAMGRIMPEVSEEQAQGVVGHLKDRGIEV
+LLNTSLGDATDGVMKLVAMPSKEEAETFAADTLVWCAGVVANSVVKSTDFPVDDRGRVEA
+TPTLQIKDGEAGALEGAWACGDVSAVPDLTGAGPGGFCVPNAQHAIRQAKRLAANYMAVR
+HGEGEVQEYVHKSLGTVAGLGFGRGVGNPLGTKIAGIPAFLAHRGYHGYAMPTLERKFRI
+LSGWVAETLFGRDSTSVAGLDTPFNPFRRAAGVELEPGRFERQRALESSKG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001681.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001681.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f2e8cfba0d52365b75add26370beb9617a330651
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001681.fa
@@ -0,0 +1,51 @@
+>0_2450
+MTASTRPAHDRAVTEADLDTLSRQLGRPVRDVVEIGARCVCGNPLVATTAPRLTNGIPFP
+TTFYLTHPALTAAVSRVEADGEMARMNERLEQDAELAAAHRAAHEAYIAERDRVGADAGT
+GPVPEIAGVSAGGMPERVKCLHALVGHALAAGPGVNPLGDETIALVAPWWTPEVCACEGA
+WDEAAAVPTKDLSRHVKHLERVAALKEVTVAGVDCGTNSIRLLISRPAGTDETTGAGADP
+AAPLADVVREMRVVRLGEGVDATGAFSDAALERTFAAVEEYARLVQRHHAGRVRFVATSA
+SRDVSNRAAFVDGVRERLGVEPEVVSGAEEAALSFTGAVSAVETADLGPEDLVLVVDLGG
+GSTELVVGTPAGEVVGAVSLDMGCVRFTERHLHSDPPTSDEVAAARADARRLLDDAAARL
+PLERVARVVGVAGSVTTVTAEALGLSAYEPAAIHGARLPITEFRAAAQGLVAATRAERSE
+RGFMHPGRVDVIGAGALLWSTVLERVAETAGVTEAWASEHDILDGIVLSLRS
+>1_429
+MTVSPRPAQDRTVTEQDLDTLSRQLGRPVRDVVEIGARCVCGNPLVATTAPRFSNGIPFP
+TTFYLTHPVLTAAVSRVEADGEMARMNDRLAQDPALAAAHRAAHEAYIAERDRVGAEAGT
+GPVPEIAGVSAGGMPERVKCLHALVGHALAAGPGVNPLGDEAIALVAPWWTPEVCACEGA
+WDEAAAVPTKDLSRHVRHLERVAALKEVTVAGVDCGTNSIRLLISRPAGTDETTGAVADP
+TAPLADVVREMRVVRLGEGVDATGAFSDAALERTFAAVDEYARLVQRHHAGRVRFVATSA
+SRDVSNRAAFVDGVRERLGVEPEVVSGDEEAALSFAGAVSAVETADLGPEDLVLVVDLGG
+GSTELVVGTPAGEVVGAVSLDMGCVRFTERHLRSDPPTSDEVAAARADARRLLDDAAARL
+PLERVARVVGVAGSVTTVTAEALGLSTYEPEAIHGARLPIAEFRAAAEGLVAATRAERSE
+RGFMHPGRVDVIGAGALLWSTVLERVAETAGVTEAWASEHDILDGIVLSLRS
+>2_2322
+MTTPASRPASQEDALTETPAPQDPRAVTEQDLDTLSRQLGRPVRDVVEVGARCVCGNPLV
+ATTAPRLSNGIPFPTTFYLTHPVLTAAVSRLEAGGLMAEMNDRLAADPELAAAHRAAHEA
+YLAERERIRVASGTGEVPEIAHVSAGGLPDRVKCLHALVGHALAAGPGVDPLGDEAIAAV
+AEWWTPGVCACAGAWDEAAPVPTRDLSRHVKHLERVERLERVTVAGVDCGTNSIRLLIAR
+PAGAEDAAEPAGLPAGAPLEDVVREMRVVRLGEGVDATGAFSEAALERTFAAVDEYAHLV
+KRHHAGRVRFVATSASRDVSNREAFVQGVSERLGVEPEVISGEEEARLSFAGAVSAVDVS
+ALDDDALVLVVDLGGGSTEFVVGTPAGEVVDAVSMDMGCVRFTERFGLAGSAAADGVAAA
+RAAVEQVMDDVAARLPLERVGAAVGVAGTVTTVTAEALGLAEYDPAAIHGAVLPVERLRA
+AAEALLTADREERAARGFMHPGRVDVIGAGSLIWSTVLARVAAASGVTEAVTSEHDILDG
+IALSLRG
+>3_159
+MTVSPRPAQDRTVTEKDLDTLSRQLGRPVRDVVEIGARCVCGNPLVATTAPRLSNGIPFP
+TTFYLTHPVLTAAVSRVEADGEMARMNDRLAQDPALAAAHRAAHEAYIAERDRVGAEAGT
+GPVPEIAGVSAGGMPERVKCLHALVGHALAAGPGVNPLGDEAIALVAPWWTPEVCACEGA
+WDEAAAVPTKDLSRHVRHLERVAALKEVTVAGVDCGTNSIRLLISRPAGTDETTGAVADP
+TAPLADVVREMRVVRLGEGVDATGAFSDAALERTFAAVDEYARLVQRHHAGRVRFVATSA
+SRDVSNRAAFVDGVRERLGVEPEVVSGAEEAGLSFAGAVSAVETADLGPEDLVLVVDLGG
+GSTELVVGTPAGEVVGAVSLDMGCVRFTERHLRSDPPTSDEVTAARADALRLLDDAAARL
+PLERVARVVGVAGSVTTVTAEALGLSTYEPEAIHGARLPIAEFRAAAEGLVAATRAERAE
+RGFMHPGRVDVIGAGALLWSTVLERVAEVAGVTEAWASEHDILDGIVLSLRS
+>4_432
+MTVSPRPAQDRTVTEKDLDTLSRQLGRPVRDVVEIGARCVCGNPLVATTAPRLSNGIPFP
+TTFYLTHPVLTAAVSRVEADGEMARMNDRLAQDPALAAAHRAAHEAYIAERDRVGAEAGT
+GPVPEIAGVSAGGMPERVKCLHALVGHALAAGPGVNPLGDEAIALVAPWWTPEVCACEGA
+WDEAAAVPTKDLSRHVKHLERVAALKEVTVAGVDCGTNSIRLLISRPAGTDETTGAGADP
+AAPLADVVREMRVVRLGEGVDATGAFSDAALERTFAAVDEYARLVQRHHAGRVRFVATSA
+SRDVSNRAAFVDGVRERLGVEPEVVSGAEEAGLSFAGAVSAVETADLGPEDLVLVVDLGG
+GSTELVVGTPAGEVVGAVSLDMGCVRFTERHLRSDPPTSDEVTAARADALRLLDDAAARL
+PLERVARVVGVAGSVTTVTAEALGLSTYEPEAIHGARLPIAEFRAAAEGLVAATRAERAE
+RGFMHPGRVDVIGAGALLWSTVLERVAEVAGVTEAWASEHDILDGIVLSLRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001683.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001683.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1ae5699f1423eb9b4f0a7f4a27dbe5f91e23d1c7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001683.fa
@@ -0,0 +1,30 @@
+>0_2454
+MDRLVAVVEALRDHCPWTAALTHGDLAEYLVEEAYEAVAEIEARDAAAWADVPARRADGA
+YPALAAELGDVLFQVVLHAAVSRPPGAPVSSAGFRVADAADALTVKMIRRNPLVLTPEGA
+PRSAEELARVTPEAVELAWEEVKAQERAAAGETASGEAEQAGGPASDPGFGGIPARLPAL
+AAAAKVVDRAARQPADPLARHAPLSGDPDSGHRAGHAAPDDGDPGWGDEAALGAELFALV
+RRARAAGLDPERALRGTVARVRSGDWDALRPPTAG
+>1_426
+MDRLVAVVEALRDHCPWTAALTHADLAEYLVEEAYEAVAEIESRDAAAWADVPARRADGA
+YPALAAELGDVLFQVVLHAAVSRAPGAPAETAGFRVDDAADALTAKMIRRNPLVLTPEGG
+LRPAEELAAVTPEAVELAWERVKAQERAAAGLSPAAPAHDDGGTGPGLDVGDIPARLPAL
+AAAANVVDRAARQEPDPLAAHVPAPAAEAGERPAAGWPDEAALGAELFALVRRARAAGLD
+PERALRTTVARVRAGDWSALRPSG
+>2_2325
+MSDAVDRLVATTEALRTHCPWTRALTHRSLTQYLVEEAYEALAEIEARTDAEWADVPARR
+ADGSYPALAGEMGDVLFQVVLHAAVSRAPDAPAPAAGFRLDDAADALTAKLVRRNPLVFT
+PDGAVRPPAELEGITPEAVELAWERVKRAERAAAEGGGAPDGPTGAPRPDDVGLGGIPAH
+LPALAAASAVVDRAARQDVDPLAGHVPLPERTGEAWEDEAALGAELFETVRRARAAGLDP
+ERALRGAIACVRAGDWDALRR
+>3_156
+MDRLVAVVEALRDHCPWTAALTHADLAEYLVEEAYEAVAEIESRDAAAWADVPARRADGA
+YPALAAELGDVLFQVVLHAAVSRAPGAPAETAGFRVDDAADALTAKMIRRNPLVLTPEGG
+LRPAEELAAVTPEAVELAWERVKAQERAAAGLSSAAPAHGDGGTGPGLDVGDIPARLPAL
+AAAAKVVDRAARQEPDPLAAHVPAPAAEAGERPAAVWPDEAALGAELFALVRRARAAGLD
+PERALRTTVARVRAGDWSALRPSG
+>4_429
+MDRLVAVVEALRDHCPWTAALTHADLAEYLVEEAYEAVAEIESRDAAAWADVPARRADGA
+YPALAAELGDVLFQVVLHAAVSRAPGAPAESAGFRLDDAADALTAKMIRRNPLVLTPEGG
+LRPAEELAAVTAEAVELAWERVKARERAAAGLSPAAPAHDDGGTGPGLDVGDIPARLPAL
+AAAAKVVDRAARQEPDPLAAHVPAPAAEAGERPAAGWPDEAALGAELFTLVRRARAAGLD
+PERALRATVARVRAGDWAALRPSG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001684.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001684.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fd0bb492dde62dbe212e71bcf8350b0c80addc75
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001684.fa
@@ -0,0 +1,40 @@
+>0_2455
+MTATQLPDTASPSPLEVDLAALPKVSLHDHLDGGLRVGTVLELATEAGVDVPADTVEGLA
+EWIAEHANGESLEKYLQVFALTTAVMQTREQLRRVAREFVEDLVADGVVYGEIRWAPEQH
+LAGGLSLDEAVEAVQEGLDEAVDAAEAQGRLIRVGQLVTAMRHADRAQEIAELAVRHRER
+GVVGFDIAGAEAGFPPSRFAETFTWLAAHHLPVTVHAGEGDGLDSVRSALVDGRALRLGH
+GVRLAEDISVEFGGVDEDGEQLDELTGLVDLGETAAWVRDRQIALEVCPSSNLQTGAVDA
+EAGIAGHPIDLLVQLGFRVTVNTDNRLVSDVSLTDELYLLAETFGYSLAELLDLQLNAAE
+AAFLAVDEREDLAEILVAGWGEVISGDDAGPVLEELDEDDEDEDA
+>1_425
+MTTTQLPDTASPSPLEVDLAVLPKVSLHDHLDGGLRVGTVLDLAREAGVEVPADTVEGLA
+EWIAEHANGESLEKYLQVFALTTAVMQTREQLRRVAREFVEDLVADGVVYGEIRWAPEQH
+LAGGLSLDEAVEAVQAGLDEAVEADAAAGHAIRVGQLVTAMRHADRAQEIAELAVRHRAA
+GVVGFDIAGAEAGFPPSRFADTFTWLAAHHLPVTVHAGEGDGLDSVRSALVDGRALRLGH
+GVRLAEDISVEYGGVDEDGEQLDELTGLVDLGETAAWVRDRQIALEVCPSSNLQTGAVDA
+AAGIAGHPIDLLVQLGFRVTVNTDNRLVSDVSLTDELYLLAETFGYSLSELLDLQLNAAE
+AAFLSVDEREDLAEILVAGWGEVISGDAVGPVLEELDDEDEDD
+>2_2326
+MTISSQTPADAAPSPLTIDLGALPKVSLHDHLDGGLRVATVLELAREAGVEVPADTVDGL
+ADWFAEHANGESLEKYLETFALTTSVMQTHEQLRRVAREFVEDLVADGVVYGEIRWAPEQ
+HLASGLTLDEAVEAVQEGLDEAVDAADEAGHVIRVGQLVTAMRHADRAQEIAELAVRHRD
+RGVVGFDIAGAEIGFPPSRFADTFTWLAQQHLPVTVHAGEAEGLSSIQDALVSGRALRLG
+HGVRIADDIQVEFGGLDEDGVPVDADTGIVDLGETAAWVRDRQIALEICPSSNLQTGAVD
+AAAGIAGHPIDLLVQLGFRVTVNTDNRLVSNVSLTDELYLLAETFGYSLSELLDLQLNAA
+EAAFLAVDEREDLAEILVSGWGEVISGAGGTVALEELEADTDDEADA
+>3_155
+MTTTQLPDTASPSPLEVDLAVLPKVSLHDHLDGGLRVGTVLDLAREAGVEVPADTVEGLA
+EWIAEHANGESLEKYLQVFALTTAVMQTREQLRRVAREFVEDLVADGVVYGEIRWAPEQH
+LAGGLSLDEAVEAVQAGLDEAVEAADAAGHVIRVGQLVTAMRHADRAQEIAELAVRHREA
+GVVGFDIAGAEAGFPPSRFADTFTWLAAHHLPVTVHAGEGDGLDSVRSALVDGRALRLGH
+GVRLAEDISVEYGGVDEDGEQLDELTGIVDLGETAAWVRDRQIALEVCPSSNLQTGAVDA
+AAGIAGHPIDLLVQLGFRVTVNTDNRLVSDVSLTDELYLLAETFGYSLSELLDLQLNAAE
+AAFLSVDEREDLAEILVAGWGEVISGDAVGPVLEELDDEDEDD
+>4_428
+MTTTQLPDTASPSPLEVDLAVLPKVSLHDHLDGGLRVGTVLDLAREAGVEVPADTVEGLA
+EWIAEHANGESLEKYLQVFALTTAVMQTREQLRRVAREFVEDLVADGVVYGEIRWAPEQH
+LAGGLTLDEAVEAVQAGLDEAVEAADAAGHVIRVGQLVTAMRHADRAQEIAELAVRHREA
+GVVGFDIAGAEAGFPPSRFADTFTWLAAHHLPVTVHAGEGDGLDSVRSALVDGRALRLGH
+GVRLAEDISVEYGGVDEDGEQLDELTGLVDLGETAAWVRDRQIALEVCPSSNLQTGAVDA
+AAGIAGHPIDLLVQLGFRVTVNTDNRLVSDVSLTDELYLLAETFGYSLSELLDLQLNAAE
+AAFLSVDEREDLAEILVAGWGEVISGDAVGPVLEELDDEDEDD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001685.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001685.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1cef3501ed9881d4732ee7d569dbb20151e95940
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001685.fa
@@ -0,0 +1,25 @@
+>0_2456
+MLEWIEETVLHAAAQWWMLPLTLALCLLDGIVPVFPSESVIVALAAIVRDGQPFSLWALW
+AVGFAGAFLGDILAYAIGRAVGVDRFRWMRTPRVRASVAVARHHLNGHGALLLFTGRFIP
+GGRVAINLTAGAIRYPLHRFVVLDLLSTAAWSAYSIMIARLTTGWLDNALLQIAVSVTGA
+ALVGVLLDRALKAVLRRRLGTGVKGLRQAEDEALR
+>1_424
+MLAWLEGAILHASAQWWVLPLTLLLCLLDGIVPIFPSESVLVALGAIVRDGHPFSLWALW
+GVGFAGAFLGDVAAYAIGRAVGVERFRWMRLRRVRATVEVARHHLHSHGALLLFTARFIP
+GGRVALNFTAGATRYPPVRFVALDLLSTASWAAYSIMIARLTAGWLENPVLQIAVSVTGA
+ALVGLLLDRLLKALLRRRLGAGVKGLTLAEQEALR
+>2_2327
+MVQALEQAILAGASHPWALPLAALLCLLDGLVPVFPSESVLVALASIVEDGRPFPLAALW
+AAGFVGAFLGDVAAYGAGRGVGVTRFRWMRHGRVRRTIVMARRNLDSHGALLLFTARFIP
+GGRVAVNLAAGAMHYSPWRFVGLDLVSTALWSVYSIAIARLTVGWLDSTVLRMAVAVLGA
+ALVGLLLDRAVKALLRRRLARDGHRLGADEQAALR
+>3_154
+MLAWLEGAILHASAQWWVLPLTLLLCLLDGIVPIFPSESVLVALGAIVRDGHPFSLWALW
+GVGFAGAFLGDVAAYAIGRAVGVERFRWMRLRRVRATVEVARHHLHSHGALLLFTARFIP
+GGRVALNLTAGATRYPPVRFVALDLLSTASWAAYSIMIARLTAGWLENPVLQIAVSVTGA
+ALVGLLLDRLLKALLRRRLGAGVKGLTLAEQEALR
+>4_427
+MLAWLEEAILHASAQWWVLPLTLLLCLLDGIVPIFPSESVLVALGAIVRDGHPFSLWALW
+GVGFAGAFLGDVAAYAIGRAVGVERFRWMRLRRVRATVEVARHHLHSHGALLLFTARFIP
+GGRVALNLTAGATRYPPVRFVALDLLSTASWAAYSIMIARLTAGWLENPVLQIAVSVTGA
+ALVGLLLDRLLKALLRRRLGSGVKGLTLAEQEALR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001686.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001686.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5f0583085c33ff935ec8916ba35f5819fcbab8ba
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001686.fa
@@ -0,0 +1,45 @@
+>0_2457
+MTAQQQAEPFDAVEVIRAKRDRQTLSPEQIDWVVDAYTRGVVADEQMSALAMAILLNGMD
+RAEISRWTDAMIASGERMDFSGLTAPDGRVLPTADKHSTGGVGDKITLPLAPLVASYGVA
+VPQLSGRGLGHTGGTLDKLEAIPGWRADLTNEQMMRQLSEVGAVICAAGSGLAPADKRLY
+ALRDVTGTVEAIPLIASSIMSKKIAEGTGALVLDVKCGSGAFMKDEASARELARTMVDLG
+RDAGVDTVALLTDMSVPLGLTAGNALEVRESVEVLAGGGPADVVELTVELARAMLAGAGV
+TDVDPAQNLANGKAMDVWHRMIEAQGGDPRADLPTAAHTEDVVAEADGVLAELDAMAVGL
+AAWRLGAGRERQGQPVQAGAGVELHVRPGERVARGQKVMTLHTDTPERFARAKAALEGGW
+AVAEKGEAEAAALRDRSVILDRIG
+>1_423
+MTAQPQAEPFDAVEVIRTKRDRGTLSPEQIDWVVDAYTRGVVADEQMSALAMAILLNGMD
+RAEIARWTDAMIASGERMDFGGLTTPDGRPLATADKHSTGGVGDKITLPLAPLVASFGVA
+VPQLSGRGLGHTGGTLDKLEAIPGWRADLSNEAMLRQLSEVGAVICAAGSGLAPADKRLY
+ALRDVTGTVEAIPLIASSIMSKKIAEGTGALVLDVKCGSGAFMKDEASARELARTMVDLG
+RDAGVDTSALLTDMSVPLGRTAGNALEVRESVEVLAGGGPADVVELTVALAAAMLAGAGV
+TDVDPAEHLANGRAMDVWNRMIEAQGGDPRAALPTAAHTEDVVAETDGVLTELDAMAVGL
+AAWRLGAGRERQGQAVQAAAGVEVHVRPGERVARGQKVLTLHTDTPERFERAKAALAGGW
+AVGELDDAAARTLRERSVILDRIG
+>2_2328
+MTTTSMPAQPAAPEAFDAIEVIRLKRDGHRLDPERIDWVVDAYTRGVVAPEQMSALAMAI
+LLNGMDREEIARWTAAMIASGERMDFSGLSAPDGRRLATADKHSTGGVGDKITLPLAPLV
+ASYGVAVPQLSGRGLGHTGGTLDKLESIPGWRADLTNDQMMRQLGEVGAVVCAAGAGLAP
+ADKKLYALRDVTGTVEAIPLIASSIMSKKIAEGTGALVLDVKCGSGAFMKDEASARELAR
+TMVDLGRDAGVDTSALLTDMSVPLGLTAGNALEVRESVEVLAGGGPADVVELTVELARAM
+LAGAGVTDVDPAENLANGKAMDVWHRMIQAQGGDSHAELPAARHQETVTADADGVLTELD
+AMAVGLAAWRLGAGRERQGEPVQAGAGVELHARPGDAVRAGQPLMTLHTDTPERFDRARA
+ALAGGWAVTAADEAEAAALRSRSVILDRIG
+>3_153
+MTAQPQAEPFDAVEVIRTKRDRGTLSPEQIDWVVDAYTRGVVADEQMSALAMAILLNGMD
+RAEIARWTDAMIASGERMDFGGLTTPDGRPLATADKHSTGGVGDKITLPLAPLVASFGVA
+VPQLSGRGLGHTGGTLDKLEAIPGWRADLSNEAMLRQLSEVGAVICAAGSGLAPADKRLY
+ALRDVTGTVEAIPLIASSIMSKKIAEGTGALVLDVKCGSGAFMKDEASARELARTMVDLG
+RDAGVDTSALLTDMSVPLGRTAGNALEVRESVEVLAGGGPADVVELTVALAAAMLAGAGV
+TDVDPAEHLANGRAMDVWNRMIEAQGGDPRAALPTAAHTEDVVAETDGVLTELDAMAVGL
+TAWRLGAGRERQGQAVQAAAGVEVHVRPGERVARGQKVLTLHTDTPERFERARAALAGGW
+SVGELDDDAARALRERSVILDRIG
+>4_426
+MTAQPQAEPFDAVEVIRTKRDRGTLSPEQIDWVVDAYTRGVVADEQMSALAMAILLNGMD
+RAEIARWTDAMIASGERMDFGGLTTPDGRPLATADKHSTGGVGDKITLPLAPLVASFGVA
+VPQLSGRGLGHTGGTLDKLEAIPGWRADLSNEAMLRQLSEVGAVICAAGSGLAPADKRLY
+ALRDVTGTVEAIPLIASSIMSKKIAEGTGALVLDVKCGSGAFMKDEASARELARTMVDLG
+RDAGVDTSALLTDMSVPLGRTAGNALEVRESVEVLAGGGPADVVELTVALAAAMLAGAGV
+TDVDPAEHLANGRAMDVWNRMIEAQGGDPRAALPTAAHTEDVVAETDGVLTELDAMAVGL
+AAWRLGAGRERQGQAVQAAAGVEVHVRPGERVAQGQKVLTLHTDTPERFERARAALAGGW
+AVGELDDVDARTLRERSVILDRIG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001688.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001688.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b48d3a40445115d203879564a5ab05755101905a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001688.fa
@@ -0,0 +1,45 @@
+>0_2459
+MSTAAQTNPVQPTPAGTGRAPSAEAPREGGTVVVRSWTTPIVFTVFTVLALVVFGLNAPD
+AAATFRVSTEADAFRIPDLVADGAGGGWIVTAILVVLTVLAWMRAARGRAVGAVLGISFA
+LVFVAGFLIWVVGSAANTSVFLTGLIAGSFALAVPLIFGSMAGILSERAGVVNIAIEGQL
+LAGAFTAALVGSMTGSPWAGLAAAVVAGVLVSVILAVFSIKYLVNQVIVGVVLNVLVAGL
+TGFLFSTVLSENSSGLNSPPRFETLRIPGLADIPVIGPILFEQTLLGYGMYLIVAVIYIG
+LFHTRWGLRVRAVGEHPKAADTLGINVLRTRYVNVLLGGAVAGMGGAFFTLVQSSSFSRE
+MTAGMGFIALAAVIFGRWNPIGAFFAALLFGFATNMQYVLAILGTPVPSQFMAMLPYLVT
+IFAVAGLVGRSRAPAASGVPYVKE
+>1_421
+MSATAARPHADVVRPEAAEPARVVVRHWTTPIALTILTLLALAVFALGAPEATATFRLSH
+ASDAVVLPDLTADPVLGGWLLVGLMAVLTAVAWLATLRSGRTPGWAAALFAVAFVAAFLI
+WVIGSADNTTVFLTGLIAGSFALAVPLIFGSMAGILAERSGVVNIAIEGQLLAGAFTAAV
+VGTATGSPWAGLVAAIVAGVLVSWLLAVFSIKYLVNQVIVGVVLNVLVAGLTSFLYSTVL
+TDGDTELNAPPHFPNLRIPGLADIPVLGPILFDQTILGYAMYLLVIALWFALFRTRWGLR
+VRAVGEHPKAADTVGIDVNRTRYAAVLLGGAVAGMGGAFFTLVSASSFTKEMTAGQGFIA
+LAAVIFGRWNPIGAFFAALLFGFATNMQYVLAILGTPVPSQFMAMLPYLVTVFAVAGLVG
+RSRGPAASGVPYVKE
+>2_2330
+MSTAAPARESATPSERAGAASSGVVVRHWSTPVLLSVFTLVSLVVFALGASDSTAVFRIS
+EASDAVRLPDLLADPAVTGWALTAVMAAITAAAWVLTLRGRRLPGWAAGLFALAFTAAFL
+VWVVGAATNNEVFLTGLIAGSFTLAVPLIFGSMAGILSERSGVVNIAIEGQLLAGAFMAA
+VVGSLTGSPWAGLGAAIVAGVLVSWLLAVFSIRYLVNQVIVGVVLNVLVAGLTNFLFSTV
+LTADSDLNAPPRFPDLRIPLLADIPVIGPILFDQTILGYLMYAIVALLWFGLFRTRWGLR
+VRAVGEHPKAADTVGIDVNRTRYVNVLLGGAVAGMGGAFFTLVSASSFSKEMTAGQGFIA
+LAAVIFGRWNPIGAFFAALLFGFATNMQFVFAILGTPVPSPFMAMLPYLVTVFAVAGLVG
+RSRGPAAAGEPYVKE
+>3_151
+MSATAARPHADVVRPEAAEPARVVVRHWTTPIALTILTLLALAVFALGAPETTATFRLSH
+ASDAVVLPDLTADPVLGGWLLVGLMAVLTVVAWLATLRSGRTPGWAAALFAVAFVAAFLI
+WVIGSADNTTVFLTGLIAGSFALAVPLIFGSMAGILAERSGVVNIAIEGQLLAGAFTAAV
+VGTATGSPWAGLAAAIVAGVLVSWLLAVFSIKYLVNQVIVGVVLNVLVAGLTSFLYSTVL
+TGGDTELNAPPHFPNLRIPGLADIPVLGPILFDQTILGYAMYLLVIALWFALFRTRWGLR
+VRAVGEHPKAADTVGIDVNRTRYAAVLLGGAVAGMGGAFFTLVSASSFTKEMTAGQGFIA
+LAAVIFGRWNPIGAFFAALLFGFATNMQYVLAILGTPVPSQFMAMLPYLVTVFAVAGLVG
+RSRGPAASGVPYVKE
+>4_424
+MSATAARPHADVVRPEAAEPARVVVRHWTTPIALTILTLLALAVFALGAPEATATFRLSN
+ASDAVVLPDLTADPVLGGWLLVGLMAVLTAVAWLATLRSGRTPGWAAALFAVAFVAAFLI
+WVIGSADNTTVFLTGLIAGSFALAVPLIFGSMAGILAERSGVVNIAIEGQLLAGAFTAAV
+VGTATGSPWAGLAAAIVAGVLVSWLLAVFSIKYLVNQVIVGVVLNVLVAGLTSFLYSTVL
+TGGDTELNAPPHFPNLRIPGLADIPVLGPILFDQTILGYAMYLLVIALWFALFRTRWGLR
+VRAVGEHPKAADTVGIDVNRTRYAAVLLGGAVAGMGGAFFTLVSASSFTKEMTAGQGFIA
+LAAVIFGRWNPIGAFFAALLFGFATNMQYVLAILGTPVPSQFMAMLPYLVTVFAVAGLVG
+RSRGPAASGVPYVKE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001692.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001692.fa
new file mode 100644
index 0000000000000000000000000000000000000000..df13c81f65537b6a878e002980499e70b7bacf67
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001692.fa
@@ -0,0 +1,40 @@
+>0_2463
+MTTSDSVLSDQRPASLPSVASVVAELEAEVVAFRRDLHRHPELSYEEYRTTDRIMELLTG
+YGFSPVRMESTGAYVDIGEGPVVLALRADIDALPLEEETGLPYVSVNDGVTHACGHDMHT
+AVMAGAALVIGRILRGATADPALRTAGERARGSVRVIFQPAEERLPGGSLSVLRQGILDG
+VPRILAAHCDPAVDVGSIGTRIGAITSAADTIRITLTGRGGHTSRPHLTEDMVFALSQIA
+VNVPAVLSRRIDVRSAVSVVWGQIAAGSAPNAIDNTGYLAGTMRCLDADVWEEAGDLLDE
+VVTQVAAPYGVQVQLEHVRGVPPVHNTDAETALIETAARRELGARAIQLTPQSMGGEDFA
+WMTQRVPGSMLRLGTRTPGGPVYDLHRGDFTPDERAIGVGMRVFAAAALQALVGEEGH
+>1_417
+MTTSDSVLTGPRPTSVPSVGPVVAELEDEIVSFRRDLHRHPELSYEEYRTTDRIVELLSG
+YGLSPVRMESTGAYVDVGEGPVVLALRADIDALPVEEETGLPYVSVNDGVAHACGHDMHT
+AVMAGVAVALGRILRGATADADLRAVGERVHGTVRVIFQPAEERLPGGSLAVLRQGILDD
+VPRILAAHCDPQVDVGSIGTRIGAITSAADTIRITLTGRGGHTSRPHLTEDMVFALSQIA
+VNVPAVLSRRIDVRSAVSVVWGQIAAGSAPNAIDNTGYLAGTMRCLDADVWEEAGALLDE
+VVRQVAAPYGVHVQLEHVRGVPPVHNTEGETALIETAARRELGSRAIVLTPQSMGGEDFA
+WMTQKVPGSMLRLGTRSPGGPIYDLHRGDYAPDERAIGVGMRVFTAAALQVLTGEDHH
+>2_2334
+MTTSESVVTGTAPRLAPPSVAPVVQQLEEHVTAFRRDVHRHPELSYEEYRTTDLIVETLA
+EYGLNPVRLEGTGAYVDLGEGPVVLGLRADIDALPVEEETGLPYVSVNDGVAHACGHDMH
+TAVMLGTALTLGRILRGAAPTAELRAVGERARGRVRVIFQPAEERLPGGSLAVIRQGVLE
+GVPRVLAAHCDPHFDVGTIGTRIGAITSAADTIRITLTGRGGHTSRPHLTEDMVFALSQI
+AVNVPAVLSRRIDVRSAVSVVWGQIAAGSAPNAIDNTGYLAGTMRCLDAGVWEEAGALLD
+EVVTQVASPYGVQVQLEHIRGVPPVDNAEAETALIEDAARRELGAHAIALTPQSMGGEDF
+AWMTQKVPGAMLRLGTRTPGGPTYDLHRGDYAPDERAIGVGMRVFAAAALDVLAGPAR
+>3_147
+MTTSDSVLTGPRPTSVPSVGPVVAELEDEIVSFRRDLHRHPELSYEEYRTTDRIVELLSG
+YGLSPVRMESTGAYVDVGEGPVVLALRADIDALPVEEETGLPYVSVNDGVAHACGHDMHT
+AVMAGVAVALGRILRGATADPDLRAVGERVHGTVRVIFQPAEERLPGGSLAVLRQGILDD
+VPRILAAHCDPQVDVGSIGTRIGAITSAADTIRITLTGRGGHTSRPHLTEDMVFALSQIA
+VNVPAVLSRRIDVRSAVSVVWGQIAAGSAPNAIDNTGYLAGTMRCLDADVWEEAGALLDE
+VVRQVAAPYGVHVQLEHVRGVPPVHNTEGETALIETAARRELGSRAIVLTPQSMGGEDFA
+WMTQKVPGSMLRLGTRSPGGPIYDLHRGDYAPDERAIGVGMRVFTAAALQVLTGEDHH
+>4_420
+MTTSDSVLTGPRPTSVPSVGPVVAELEDEIVSFRRDLHRHPELSYEEYRTTDRIVELLSG
+YGLSPVRMESTGAYVDVGEGPVVLALRADIDALPVEEETGLPYVSVNDGVAHACGHDMHT
+AVMAGVAVALGRILRGATADPDLRAVGERVHGTVRVIFQPAEERLPGGSLAVLRQGILDD
+VPRILAAHCDPQVDVGSIGTRIGAITSAADTIRITLTGRGGHTSRPHLTEDMVFALSQIA
+VNVPAVLSRRIDVRSAVSVVWGQIAAGSAPNAIDNTGYLAGTMRCLDADVWEEAGALLDE
+VVRQVAAPYGVHVQLEHVRGVPPVHNTEGETALIETAARRELGSRAIVLTPQSMGGEDFA
+WMTQKVPGSMLRLGTRSPGGPIYDLHRGDYAPDERAIGVGMRVFTAAALQVLTGEDHH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001696.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001696.fa
new file mode 100644
index 0000000000000000000000000000000000000000..df769d0dc539b866f27d939a21ea612b305c14c0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001696.fa
@@ -0,0 +1,55 @@
+>0_2467
+MQVHKYDVVIVGAGGAGMRAAIEAGQRAHTAVLTKIYPTRSHTGAAQGGMCAALANVEED
+NWEWHTFDTVKGGDYLVDQDAAEVMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
+RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHNVEFYNEFYVLDLLLVEEDAVREDGTP
+YKQKRAAGVVSYELATGEIHVFQAKSVVFATGGAGKVYKTTSNAHTLTGDGMAIAYRAGL
+PLEDMEFVQFHPTGLAGLGILLSEAARGEGGILRNSDGERFMERYAPTIKDLAPRDIVAR
+SMAEEVRQGRGAGPNKDYVLLDLTHLEPSHIDEKLPDITEFARTYLGVEPYTEPVPVFPT
+CHYFMGGVPTNIKAEVLQDNDTVVPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAG
+IYAAEYAQTADFVELPEGGELPTVEHIENLRSATGSERVADIRAELQESMDADMQVFRDE
+DSIRRALAKIEELRGRYENVSVQDKGKRFNLDLLEGMELGYLLDIAEAMTLAALGRKESR
+GGHYREDYPDRDDANFMAHTMIYRDETAEMEGVKGIRFETKPVVVTRYQPMERKY
+>1_413
+MQVHKYDVVIVGAGGAGMRAAIEAGQRAHTAVLTKIYPTRSHTGAAQGGMCAALANVEED
+NWEWHTFDTVKGGDYLVDQDAAEVMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
+RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHNVEFFNEFYVLDLLLVEEDAVREDGTA
+YKQKRTAGVVSYELATGEIHVFQAKSVIFATGGAGKVYKTTSNAHTLTGDGMAIAYRAGL
+PLEDMEFVQFHPTGLAGLGILLSEAARGEGGILRNADGERFMERYAPTIKDLAPRDIVAR
+SMAEEVRQGRGAGPNKDYVLLDLTHLEPSHIDEKLPDITEFARTYLGVEPYTEPVPVFPT
+CHYFMGGIPTNIQAEVLQDNDTVVPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAG
+IYAAEYAAQADWVELPEGGELPTVEHIENLRSATGSERVADIRAELQESMDADMQVFRDE
+DSIRRALAKIEELRGRYENVSVQDKGHRFNLDLLEGMELGYLLDIAEAMTLAALGRKESR
+GGHYREDYPDRDDENFMAHTMIYRDETAEMEGVKGIRFETKPVVVTRYQPMERKY
+>2_2338
+MQVHKYDVVIVGAGGAGMRAAIESGQRARTAVLTKIYPTRSHTGAAQGGMCAALANVEED
+NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
+RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFYNEFYVLDLLLVDEDATREDGTP
+YTQKRVAGVVSYELATGEIHVFQAKAVIFATGGAGKVYKTTSNAHTLTGDGMAIAYRAGL
+PLEDMEFVQFHPTGLAGLGILLSEAARGEGGILRNAEGERFMERYAPTIKDLAPRDIVAR
+SMAEEVRQGRGAGPNKDYVLLDLTHLEPSHIDEKLPDITEFARTYLGVEPYTEPVPVFPT
+CHYFMGGMPTNVKAEVLQDNDTVVPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAG
+IHAAEYAAQADWVELPEGGELPTVQHIENLRSATGSERVADIRAELQESMDADMQVFRDE
+DSIRRALAKIEELRHRYENVSVQDKGHRFNLDLLEGMELGYLLDIAEAMTLAALGRKESR
+GGHYREDYPNRDDANFMAHTMIYRDETAEMEGVKGIRFETKPVVVTRYQPMERKY
+>3_143
+MQVHKYDVVIVGAGGAGMRAAIEAGQRAHTAVLTKIYPTRSHTGAAQGGMCAALANVEED
+NWEWHTFDTVKGGDYLVDQDAAEVMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
+RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHNVEFFNEFYVLDLLLVEEDAVREDGTA
+YKQKRTAGVVSYELATGGIHVFQAKSVIFATGGAGKVYKTTSNAHTLTGDGMAIAYRAGL
+PLEDMEFVQFHPTGLAGLGILLSEAARGEGGILRNADGERFMERYAPTIKDLAPRDIVAR
+SMAEEVRQGRGAGPNKDYVLLDLTHLEPSHIDEKLPDITEFARTYLGVEPYTEPVPVFPT
+CHYFMGGIPTNIQAEVLQDNDTVVPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAG
+IYAAEYAAQADWVELPEGGELPTVEHIENLRSATGSERVADIRAELQESMDADMQVFRDE
+DSIRRALAKIEELRGRYENVSVQDKGRRFNLDLLEGMELGYLLDIAEAMTLAALGRKESR
+GGHYREDYPDRDDENFMAHTMIYRDETAEMEGVKGIRFETKPVVVTRYQPMERKY
+>4_416
+MQVHKYDVVIVGAGGAGMRAAIEAGQRAHTAVLTKIYPTRSHTGAAQGGMCAALANVEED
+NWEWHTFDTVKGGDYLVDQDAAEVMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
+RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHNVEFFNEFYVLDLLLVEEDAVREDGTA
+YKQKRTAGVVSYELATGEIHVFQAKSVIFATGGAGKVYKTTSNAHTLTGDGMAIAYRAGL
+PLEDMEFVQFHPTGLAGLGILLSEAARGEGGILRNADGERFMERYAPTIKDLAPRDIVAR
+SMAEEVRQGRGAGPNKDYVLLDLTHLEPSHIDEKLPDITEFARTYLGVEPYTEPVPVFPT
+CHYFMGGIPTNIQAEVLQDNDTVVPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAG
+IYAAEYAAQADWVELPEGGELPTVEHIENLRSATGSERVADIRAELQESMDADMQVFRDE
+DSIRRALAKIEELRGRYENVSVQDKGHRFNLDLLEGMELGYLLDIAEAMTLAALGRKESR
+GGHYREDYPDRDDENFMAHTMIYRDETAEMEGVKGIRFETKPVVVTRYQPMERKY
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001700.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001700.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b1213a6e09c4b6a2839ff493f31fe73a9241856a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001700.fa
@@ -0,0 +1,45 @@
+>0_2472
+MKATDLAGTALANTMRAKLRTFLTVVAIVIGAFTLTLTSGLGAGINKFVDNMVEGFGSPD
+QLTVMKQVDPTSFAAGGAPQEYEPDEAAAGEMFGLPLLTAADLDRIRDTEHVTEVETARL
+VEPEYIEGEDGRQWQVPFMGSSFEIGALSLAAGREPAADAAEVTVPQDWVEALGGQTPED
+VLGQTVTLVAADPLGKQDGVEAEVVGVTEPMASGSGSGPVPSGEVETRLHEIQTAGLPEA
+QRDTFFSASVTVADMAANEAAVKAALAEEGYSAQTLEDQLGPIRGIIDAVTWVLNGFALI
+ALLAASFGIINTLLMAVQERTREIGLMKALGMTGRKIFGLFTMEAVVIGLLGSLIGVGLG
+VAVGVVANQVLTEGALSGVTGLVLYAVEPLSLALIVLLIVAIAFLAGTLPAARAARKDPI
+EALRYE
+>1_408
+MKATDVAGTALANTMRSKLRTFLTVVAIVIGAFTLTLTTGLGAGINKYVDNVVEGFGKPG
+ELTVMKQQDMSSAGAASGSPQEYAEQDAAGGEMFGMPLLTQEDLAAIEDTEHVTEVKTYR
+VAEPEYIQGPDDRKWQTGFMGSSGEIDMLTFSAGRAPEAGAAEIVMPESWVEDLGAGDAE
+DLVGTELTVVAATPLQEHKSVTATVVGVTKAAASGAGTAPTPSESLEQEIYDITTEGLPE
+SQRDTYFQATAIVADPEANEDAVKQALADQGLLAQTLEEQLGVIRGIIDAVTWVLTGFAL
+IALLAASFGIINTLLMAVQERTREIGLMKALGMTGGKIFGLFTMEAVVIGLLGSLVGIGL
+GVAVGLIANQVLTTGPLSGVTGLVLFAVNPLALLLILLLIVAIAFIAGTLPALRAARKDP
+IEALRHE
+>2_2342
+MKAPDLIRTALGNTARAKLRTFLTVIAIMIGAFTLTLTSGLGAGINKYVDNMVAGFGAPD
+ELTVSKPAGNQMAGMTGGAPTEYEDSAAAGEMYGMPLLTQEDLDRIGATEHVTGVETVRI
+VEVQDLRGADGRRWSVPMMGGTYEIGKLSVKAGREPAADGGAMELTVPTEWVESLGGTAP
+EDVLGQEVTLTTKTPLQQERTVQAEVVGVTERLPSGVGANPVPSAALEQGLHDIQTEGLP
+EEQRNTYFQATAIVEGMPGNEAAVKAALSEQGYQAQTLEDQLGSIRGIISAVTWVLNGFA
+LIALLAASFGIINTLLMAVQERTREIGLMKALGMTSGRIFGLFTLEAVVIGLLGSLLGVG
+LGVAVGVGVNAWLTTGGPLEDVAGLVLYAVDPLALLLIVLLIVAIAFVAGTLPAARAARK
+DPIEALRHE
+>3_138
+MKATDVAGTALANTMRSKLRTFLTVVAIVIGAFTLTLTTGLGAGINKYVDNVVEGFGKPG
+ELTVMKQQDMSSAGAASGSPQEYTEQDAAGGEMFGMPLLTQEDLAAIEDTEHVTEVKTYR
+VAEPEYIQGPDDRKWQTGFMGSSGEIDMLTFSAGRAPEAGAAEIVMPESWVEDLGAGDAE
+DLVGTELTVVAATPLQEHKSVTATVVGVTKAAASGAGTAPTPSESLEQAIYDITTEGLPE
+SQRNTYFQATAIVEDPEANEDAVKQALADQGLLAQTLEEQLGVIRGIIDAVTWVLTGFAL
+IALLAASFGIINTLLMAVQERTREIGLMKALGMTGGKIFGLFTMEAVVIGLLGSLVGIGL
+GVAVGLIANQVLTTGPLSGVTGLVLFAVNPLALLLILLLIVAIAFIAGTLPALRAARKDP
+IEALRHE
+>4_411
+MKATDVAGTALANTMRSKLRTFLTVVAIVIGAFTLTLTTGLGAGINKYVDNVVEGFGKPG
+ELTVMKQQDMSSAGAASGSPQEYTEQDAAGGEMFGMPLLTQEDLAAIEDTEHVTEVKTYR
+VAEPEYIQGPDDRKWQTGFMGSSGEIDMLTFSAGRAPEAGAAEIVMPESWVEDLGAGDAE
+DLIGTELTVVAATPLQEHKSVTATVVGVTKAAASGAGTAPTPSESLEQEIYDITTEGLPE
+SQRDTYFQATAIVADPEANEDAVKQALADQGLLAQTLEEQLGVIRGIIDAVTWVLTGFAL
+IALLAASFGIINTLLMAVQERTREIGLMKALGMTGGKIFGLFTMEAVVIGLLGSLIGIGL
+GVAVGLIANQVLTTGPLSGVTGLVLFAVNPLALLLILLLIVAIAFIAGTLPALRAARKDP
+IEALRHE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001707.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001707.fa
new file mode 100644
index 0000000000000000000000000000000000000000..11179f30cfd0a15154da9a9f04afde47916fe132
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001707.fa
@@ -0,0 +1,16 @@
+>0_2481
+MDALDLPALAGARALELPGSELTHPFGPEADVYKVRGRVFMLVLEARGAMLVNLKAVPED
+GAALREAYPAQVTPGYHMSKRHWISLGPPPADPHDDDAPARLDAALVRDLVTESYLLVLE
+RSVPRRDWPVDPATFGRG
+>1_1958
+MDEPTLLRVALPVANTPGHHLDQRLWLSRAARPVDPETFGRA
+>2_743
+MDEPTLLRIARDRALELPGSAASHPFGPDTEVVKVQGKLFVVFIDHDGRRLVNVKARPED
+GAQLRAALPAAITPGYHMDKRHWLSLAAHPDLDEQLVRDLVTESYLLVVAKLPRTRRPVD
+PDTFGRA
+>3_1678
+MDEPTLLRVALPVANTPGHHLDQRLWLSRAARPVDPETFGRA
+>4_1896
+MDEPTLLRIARDRALELPGSAASHPFGPDTEVMKVQGKLFAVFIDHDGRRLVNVKARPED
+GAQLRAALPAAITPGYHMDKRHWLSLAAHPDLDEQLVRDLVTESYLLIVAKLPRTRRPVD
+PETFGRV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001708.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001708.fa
new file mode 100644
index 0000000000000000000000000000000000000000..972af6c6f44f70fd5f0615a78990c4d08c2cefca
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001708.fa
@@ -0,0 +1,35 @@
+>0_2482
+MTAKVLDGKATAAALKEELRERVSALTERGHTPGLGTVLVGEDAGSQKYVAGKHRDCAEV
+GIESIQRELPADATEEEILAVVRELNEDPACTGYIVQLPLPKHVDTQKVLEAIDPDKDAD
+GLHPMNLGRLVASVGGELDSPLPCTPAGCVELLRRHGVELAGKHVLVIGRGVTIGRPAGL
+VLTRREVNATVTLAHTGTQNLDELLGQADVVIAAAGSAHMVRPEQVKDGVIVLDVGVSCV
+TGEDGTSRVLGDVDPAVKEKAAWMAPNPGGVGPMTRVMLLSNVVEAAERAADAEDWAGER
+AEA
+>1_400
+MTAKVLDGKATAAAIKEELRGRVAALAERGHTPGLGTLLVGEDAGSQKYVAGKHRDCAEV
+GIESIQRELPADATEEQILDVVRELNEDPACTGYIVQLPLPKHVDTQKVLEAIDPDKDAD
+GLHPMNLGRLVASVGGELDSPLPCTPAGCVELLRHHGVELAGKHVLVIGRGVTIGRPAGL
+VLTRREVNATVTLAHTGTTNLDELLASADVVIAAAGSAHMVTPEQVKEGVIVLDVGVSRV
+TGEDGTSRVLGDVDPAVKEKAAWMAPNPGGVGPMTRVMLLANVVEAAERAADGEDWAGER
+AGA
+>2_2351
+MTAKVLDGKATAAAIKEELRGRVAALAERGHTLGLGTLLVGEDAGSQKYVAGKHRDCAEV
+GIRSIQKELPGDATEEQILDVVRELNEDPECTGYIVQLPLPKHVDTQKVLEAIDPDKDAD
+GLHPMNLGRLVASVGGELDSPLPCTPAGCVELLRHHGVELAGKHVLVIGRGVTIGRPAGL
+VLTRREVNATVTLAHTGTTNLDELLASADVVIAAAGSAHMVKPEQVKEGVIVLDVGVSRV
+TGEDGKSRVLGDVDPAVKEKAAWMAPNPGGVGPMTRVMLLANVVEAAERAADGEDWAGER
+AGA
+>3_130
+MTAKVLDGKATAAAIKEELRGRVAALAERGHTPGLGTLLVGEDAGSQKYVAGKHRDCAEV
+GIESIQRELPADATEEQILDVVRELNEDPACTGYIVQLPLPKHVDIQKVLEAIDPDKDAD
+GLHPMNLGRLVASVGGELDSPLPCTPAGCVELLRHHGVGLAGKHVLVIGRGVTIGRPAGL
+VFTRREVNATVTLAHTGTTNLDELLASADVVIAAAGSAHMVKPEQVKEGVIVLDVGVSRV
+TGEDGTSRVLGDVDPAVKEKAAWMAPNPGGVGPMTRVMLLANVVEAAERAADGEDWAGER
+AGA
+>4_403
+MTAKVLDGKATAAAIKEELRGRVAALAERGHTPGLGTLLVGEDAGSQKYVAGKHRDCAEV
+GIESIQRELPADATEEQILDVVRELNEDPACTGYIVQLPLPKHVDTQKVLEAIDPDKDAD
+GLHPMNLGRLVASVGGELDSPLPCTPAGCVELLRHHGVELAGKHVLVIGRGVTIGRPAGL
+VLTRREVNATVTLAHTGTTNLDELLASADVVIAAAGSAHMVKPEQVKEGVIVLDVGVSRV
+TGEDGKSRVLGDVDPAVKEKAAWMAPNPGGVGPMTRVMLLANVVEAAERAAEDDGRAGER
+AGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001709.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001709.fa
new file mode 100644
index 0000000000000000000000000000000000000000..316fb4fce093332c67a5f1fc5927457bc9b3ae0c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001709.fa
@@ -0,0 +1,45 @@
+>0_2483
+MTQTPDINTQPLSEVDPEIAAALADELGRQRGTLEMIASENFVPRAILETQGSVLTNKYA
+EGYPGRRYYGGCEFVDVAENLAIQRAKDLFGAEHANVQPHAGAQANVAVMTALMDHGDTL
+MGLSLAHGGHLTHGMKINFSGKNYKIAAYEVEPDTYRIDMDKVREKALEAQPKVIVAGWS
+AYPRQLDFAAFRSIADEVGAKLWVDMAHFAGLVAAGLHPNPVPHADVVTSTVHKTLAGPR
+SGFILSTEEFKKKIDSAVFPGQQGGPLMHAIAGKAVAFKIAGSADFKEKQERTLQGAQIL
+AERLTAPDMTELGISVLTGGTDVHLVLVDLRESQLDGKQGEDILHEVGITVNRNSVPWDP
+RPPMTTSGLRIGTPALASRGFGEAEFREVAEIVAAALKPSPDVQALRARVVKLTEDFPLY
+DGLEGW
+>1_399
+MTQTPDINTQPLAEVDPEIAAALADELGRQRGTLEMIASENFVPRAILETQGSVLTNKYA
+EGYPGRRYYGGCEFVDVAENLAIQRAKDLFGAEHANVQPHAGAQANVAVMTSLLDHGDTM
+MGLSLAHGGHLTHGMKLNFSGKNYSIAAYEVEPDTHRIDMDKVREKALEARPKVIVAGWS
+AYPRQLDFAAFRSIADEVGARLWVDMAHFAGLVAAGLHPNPVPHADVVSSTVHKTLAGPR
+SGFILSTEELKKKIDSAVFPGQQGGPLMHAIAGKAVAFKIAGSADFKEKQERTLAGAQIL
+AERLTAPDMAEHGISVLTGGTDVHLVLVDLRESQLDGRQGEDILHEVGITVNRNSVPWDP
+RPPMTTSGLRIGTPALASRGFGEAEFREVSDVIAEALKPSPDVEALRARVVKLTEDFPLY
+DGLEGW
+>2_2352
+MTQTPDINTQPLAEVDPEIAAALADELGRQRGTLEMIASENFVPRAILETQGSVLTNKYA
+EGYPGRRYYGGCEFVDVAENLAIQRAKDLFGAEHANVQPHAGAQANVAVMTSLLDHGDTM
+MGLSLAHGGHLTHGMKLNFSGKNYSIAAYEVEPDTHRIDMDKVREKALEARPKVIVAGWS
+AYPRQLDFAAFRSIADEVGARLWVDMAHFAGLVAAGLHPNPVPHADVVSSTVHKTLAGPR
+SGFILSTEELKKKIDSAVFPGQQGGPLMHAIAGKAVAFKIAGSADFKEKQERTLAGAQIL
+AERLTAPDMAEHGISVLTGGTDVHLVLVDLRESQLDGRQGEDILHEVGITVNRNSVPWDP
+RPPMTTSGLRIGTPALASRGFGEAEFREVSDVIAEALKPSPDVEALRARVVKLTEDFPLY
+DGLEQW
+>3_129
+MTQTPDINTQPLAEVDPEIAAALADELGRQRGTLEMIASENFVPRAILETQGSVLTNKYA
+EGYPGRRYYGGCEFVDVAENLAIQRAKDLFGAEHANVQPHAGAQANVAVMTSLLDHGDTM
+MGLSLAHGGHLTHGMKLNFSGKNYSIAAYEVEPDTHRIDMDKVREKALEARPKVIVAGWS
+AYPRQLDFAAFRSIADEVGARLWVDMAHFAGLVAAGLHPNPVPHADVVSSTVHKTLAGPR
+SGFILSTEELKKKIDSAVFPGQQGGPLMHAIAGKAVAFKIAGSADFKEKQERTLAGAQIL
+AERLTAPDMAEHGISVLTGGTDVHLVLVDLRESQLDGRQGEDILHEVGITVNRNSVPWDP
+RPPMTTSGLRIGTPALASRGFGEAEFREVSDVIAEALKPSPDVEALRARVVKLTEDFPLY
+DGLEGW
+>4_402
+MTQTPDINTQPLAEVDPEIAAALADELGRQRGTLEMIASENFVPRAILETQGSVLTNKYA
+EGYPGRRYYGGCEFVDVAENLAIQRAKDLFGAEHANVQPHAGAQANVAVMTSLLDHGDTM
+MGLSLAHGGHLTHGMKLNFSGKNYSIAAYEVEPDTHRIDMDKVREKALEARPKVIVAGWS
+AYPRQLDFAAFRSIADEVGARLWVDMAHFAGLVAAGLHPNPVPHADVVSSTVHKTLAGPR
+SGFILSTEELKKKIDSAVFPGQQGGPLMHAIAGKAVAFKIAGSADFKEKQERTLAGAQIL
+AERLTAPDMAEHGISVLTGGTDVHLVLVDLRESQLDGRQGEDILHEVGITVNRNSVPWDP
+RPPMTTSGLRIGTPALASRGFGEAEFREVSDVIAEALKPSPDVEALRARVVKLTEDFPLY
+DGLEGW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001713.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001713.fa
new file mode 100644
index 0000000000000000000000000000000000000000..effdbd08946314b084b90fe487e3bf7ad8b28187
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001713.fa
@@ -0,0 +1,45 @@
+>0_2489
+MASITLNHIDKTYDDGFHAIKDVNLEIEDGEFVILVGPSGSGKSTLLRMIVGLEDISDGE
+MLIDGRRVNEAAPKDRNLAMVFQNYALYPHLTVYENIAFPLRLIKDNKPAEEEIDRKVRN
+AARVLELEDHLERKPGNLSGGQRQRVAMGRAIVREADAFLFDEPLSNLDAKLRGQMRAEI
+SQLQRRLATTSVYVTHDQTEAMTLGDRVAVLKKGVLQQVASPRELYEQPLNLFVAGFIGS
+PSMNFLPASLKEKDGVHVLSSPIGDIPVPPEKARAAEGRDIVFLGLRPEFFEDAELVEDS
+RRDQGSTFDATLTHLEWLGHEQYGYIEFDPDPAVAEMLSSLAKDLDADELRPVVVATLSG
+ESRARPGTPTRLWVDTTRVHLFDPKTGENLTRDPEVGAELTRRAAEERRRQIEVAAERDA
+AADREAADTRR
+>1_393
+MASITLNHIDKTYDDGFHAIKDVNLEIEDGEFVILVGPSGSGKSTLLRMIVGLEDITDGE
+MLIDGRRVNEAAPKDRNLAMVFQNYALYPHLTVYENIAFPLRLIKDNKPSEEEIDRKVRD
+AARVLELEDHLERKPGNLSGGQRQRVAMGRAIVREADAFLFDEPLSNLDAKLRGQMRAEI
+SQLQRRLATTSVYVTHDQTEAMTLGDRVAVLKKGELQQVASPRELYEQPLNLFVAGFIGS
+PSMNFLPASLKQKEGGHVLSSPIGDIPVPPEKARAAEGRDIVFLGLRPEFFEDAELVEDS
+RRDRGSTFDATLTHLEWLGHEQYGYIEFDPDPAVAEMLSSLAKDLDADELRPVVVATLSG
+ESRARPGTPTRLWVDTTRVHLFDPTTGENLTRDPEVGAELTRRAAEERRRQIEMAAERDA
+AEHEADAPRR
+>2_2357
+MASITLNHIEKTYDDGYHAISDVNLDIEDGEFVILVGPSGSGKSTLLRMIVGLEDISGGD
+LLIDGRRVNEAAPKDRNLAMVFQNYALYPHLSVYENIAFPLRLAKDGKLSEEELDRKVRD
+AARVLELQDHLDRKPANLSGGQRQRVAMGRAIVRDADAFLFDEPLSNLDAKLRGQMRAEI
+SQLQRRLATTSVYVTHDQTEAMTLGDRVAVLKKGVLQQVASPRELYEQPLNLFVAGFIGS
+PSMNFLPATVKEQGGQYVLSSPIGDIPVPAEKAQRAAGRDIVFMGLRPEFFEDAELVEDA
+KRPHGSEFDATLTHLEWLGHEQYGYIEFEPDPEVAELLSSLAKDLDADELRPVVVTTLSA
+ESAARPGVPTRLWVDTTRVHLFDPKTGENLTRDAEAGAELTRRTAEARRRQIEAAQARDA
+EGR
+>3_122
+MASITLNHIDKTYDDGFHAIKDVNLEIEDGEFVILVGPSGSGKSTLLRMIVGLEDITDGE
+MLIDGRRVNEAAPKDRNLAMVFQNYALYPHLTVYENIAFPLRLIKDNKPSEEEIDRKVRD
+AARVLELEDHLERKPGNLSGGQRQRVAMGRAIVREADAFLFDEPLSNLDAKLRGQMRAEI
+SQLQRRLATTSVYVTHDQTEAMTLGDRVAVLKKGELQQVASPRELYEQPLNLFVAGFIGS
+PSMNFLPASLKQKEGGHVLSSPIGDIPVPPEKARAAEGRDIVFLGLRPEFFEDAELVEDS
+RRDRGSTFDATLTHLEWLGHEQYGYIEFEPDPAVAEMLSALAKDLDADELRPVVVATLSG
+ESRARPGTPTRLWVDTTRVHLFDPTTGENLTRDPEVGAELTRRAGEERRRQIEMAAERDA
+AEHEADAPRR
+>4_396
+MASITLNHIDKTYDDGFHAIKDVNLEIEDGEFVILVGPSGSGKSTLLRMIVGLEDITDGE
+MLIDGRRVNEAAPKDRNLAMVFQNYALYPHLTVYENIAFPLRLIKDNKPSEEEIDRKVRD
+AARVLELEDHLERKPGNLSGGQRQRVAMGRAIVREADAFLFDEPLSNLDAKLRGQMRAEI
+SQLQRRLATTSVYVTHDQTEAMTLGDRVAVLKKGELQQVASPRELYEQPLNLFVAGFIGS
+PSMNFLPASLKQKEGGHVLSSPIGDIPVPPEKARAAEGRDIVFLGLRPEFFEDAELVEDS
+RRDRGSTFDATLTHLEWLGHEQYGYIEFEPDPAVAEMLSALAKDLDADELRPVVVATLSG
+ESRARPGTPTRLWVDTTRVHLFDPTTGENLTRDPEVGAELTRRAGEERRRQIEMAAERDA
+AEHEADAPRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001720.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001720.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f5d5499b4a11e40fbd1a7d930121a00abf899f99
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001720.fa
@@ -0,0 +1,70 @@
+>0_2497
+MSKIIYTLTDEAPMLATASLLPIVRAYAGTAGVELETRDISLAGRILAAFRDVLPEDQRT
+ADALAELGELVKSPEANVIKLPNISASVPQLRAAIKELQEDGYALPEYPDEPKTDEEKDA
+KARYDSVKGSAVNPVLREGNSDRRAPKAVKNYAKMFPHSMGEWTPDSKTAVATMGADDFR
+SNEKSVTMPADDTLTIEFTGEDGKTTVLKEGLKVLAGEVVDGTFMSAKALDAFLAEQVKR
+AKEEGILFSAHLKATMMKVSDPVIFGHVVKAYFSELFEKYGEQLEAAGLNPNNGLAAIEG
+GLDKLDAETAEGVKKAIAAAYEEGPDVAMVNSAKGITNLHVPSDVIVDASMPAMIRTSGR
+MWNKDDQTQDTLAVIPDSSYAGIYQAVIEDCKKHGAYDPTTMGTVPNVGLMAQKAEEYGS
+HDKTFILESAGTVAVKNAAGETLISHDVEAGDIWRACQTKDVPVRDWVKLAVTRARASQT
+PAVFWLDETRAHDRELIAKVEEYLKEHDTEGLDLRILSPVEAAKLSVERIRRGEDTISVT
+GNVLRDYNTDLFPILELGTSAKMLSVVPLLNGGGLFETGAGGSAPKHVQQLVEENHLRWD
+SLGEFLALAVSFEHEAVANENHRAQVLADTLDAATGTLLIEGKSPQRKVGELDNRGSHFY
+LALYWARELAKQTEDAELVAAAKPVAEELEAQEETILAELNGVQGSPVDLGGYYWPELEK
+VTSVMRPSATLNAIVDKLSV
+>1_382
+MSKIIYTLTDEAPMLATASLLPIVRAYAGTAGVELETRDISLAGRILAAFKDVLPEDQRT
+ADALAELGELVKSPEANVIKLPNISASVPQLRAAIKELQADGYALPEYPDEPKTDEEKDA
+KARYDSVKGSAVNPVLREGNSDRRAPKAVKAYAKRFPHSMGEWTPDSKTAVATMGADDFR
+ANEQSVTLPAADVLTIEFTGEDGKTTVLKEGLKVLKGEVVDGTFMSAKALDAFLAEQVKR
+AKEEGILFSAHLKATMMKVSDPVIFGHVVKAYFSELFEKYGEQLAAAGLSANNGLAAIEG
+GLDKLDAETAEGVRAAIAAAYENGPDVAMVNSAKGITNLHVPSDVIVDASMPAMIRTSGR
+MWNKDDQTQDTLAVIPDSSYAGVYQAVIDDCKANGAYDPTTMGTVPNVGLMAQKAEEYGS
+HDKTFIMDAAGTVAVKNSAGETLLSHDVEAGDIWRACQTKDVPVRDWVKLAVTRARASQT
+PAVFWLDETRAHDRELIKKVEEYLKEHDTEDLDIRILSPVEAAKLSVERIRRGEDTISVT
+GNVLRDYNTDLFPILELGTSAKMLSVVPLLNGGGLFETGAGGSAPKHVQQLVEENHLRWD
+SLGEFLALAVSFEHEAVANENHRARVLADTLDAATGTLLIEGKSPKRKVGELDNRGSHFY
+LALYWARELAKQTEDAELAAAAKPVAEELEAQEETILGELNGVQGSPVDLGGYYWPELEK
+VTSVMRPSATLNAIVDKLSV
+>2_2366
+MSKIIYTLTDEAPMLATASLLPIVRAYAGTAGVELETRDISLAGRILAAFNDLLPEEQRV
+NDALAELGELVKTPEANVIKLPNISASVPQLRAAIKELQADGYALPEYVDDPQTDKEKDA
+RKRYDSVKGSAVNPVLREGNSDRRAPKAVKNYAKKFPHSMGAWTADSKTAVATMGQDDFR
+SNEKSVTMPKDDVLSIEFTGQDGTTKILKEGLKVLEGEVVDGTFMSAKALDAFLAEQVTR
+AKEEGVLFSAHLKATMMKVSDPVIFGHVVKAYFADLFAQYGEQLAAAGLDPNNGLAAIEA
+GLDKLDAETAEGVRKAIADAYQNGPDVAMVNSDKGITNLHVPSDVIVDASMPAMIRTSGH
+MWDKDGAERDTLAVIPDSSYAGIYQVVIDDCKANGAYDPTTMGTVPNVGLMAQKAEEYGS
+HDKTFVMEADGTVEVKDSAGEVLFSHEVEAEDIWRACQTKDVPVQDWVKLAVTRARASQT
+PAVFWLDETRAHDRELIKKVEQYLQGHDTEGLDLRIMSPVEATKFTVERMRRGEDTITVT
+GNVLRDYNTDLFPILELGTSAKMLSIVPLINGGGLFETGAGGSAPKHVQQLVGENHLRWD
+SLGEFLALAVSFEHEAAHNGNHRAQVLADTLDAATGILLIEGKSPERKAGQLDNRGSHFY
+LALYWAQELAKQTADAELAAAAKPVAEELEAQEETILAELNGVQGSPVDLGGYYAPSMDK
+VSEVMRPSATLNGIIATLGA
+>3_114
+MSKIIYTLTDEAPMLATASLLPIVRAYAGTAGVELETRDISLAGRILAAFKDVLPEEQRT
+ADALAELGELVKTPEANVIKLPNISASVPQLRAAIKELQAHGYALPEYPDEPKTDAEKDA
+KARYDSVKGSAVNPVLREGNSDRRAPKAVKAYAKRFPHSMGEWTPDSKTAVATMGADDFR
+ANEQSVTLPAADVLTIEFTGEDGKTTVLKEGLKVLKGEVVDGTFMSAKALDAFLAEQVKR
+AKEEGILFSAHLKATMMKVSDPVIFGHVVKAYFSELFEKYGEQLAAAGLSANNGLAAIEG
+GLDKLDAETAEGVRAAIAAAYENGPDVAMVNSAKGITNLHVPSDVIVDASMPAMIRTSGR
+MWNKDDQTQDTLAVIPDSSYAGVYQAVIDDCKANGAYDPTTMGTVPNVGLMAQKAEEYGS
+HDKTFIMDAAGTVAVKNSAGETLLSHEVEAGDIWRACQTKDVPVRDWVKLAVTRARASQT
+PAVFWLDETRAHDRELIKKVEEYLKEHDTEGLDLRILSPVEATKLSVERIRRGEDTISVT
+GNVLRDYNTDLFPILELGTSAKMLSIVPLLNGGGLFETGAGGSAPKHVQQLLEENHLRWD
+SLGEFLALAVSFEHEAVANENHRAQVLADTLDAATGTLLIEGKSPKRKVGELDNRGSHFY
+LALYWARELAKQTEDAELAAAAKPIAEELEAQEETILAELNGVQGSPVDLGGYYAPEMEK
+VTSVMRPSATLNAIVDKLSV
+>4_388
+MSKIIYTLTDEAPMLATASLLPIVRAYAGTAGVELETRDISLAGRILAAFKDVLPEEQRT
+ADALAELGELVKSPEANVIKLPNISASVPQLRAAIKELQADGYALPEYPDEPKTDEEKDA
+KARYDSVKGSAVNPVLREGNSDRRAPKAVKAYAKRFPHSMGEWTPDSKTAVATMGADDFR
+ANEQSVTLPAADVLTIEFTDEDGETTVLKEGLKVLKGEVVDGTFMSAKALDAFLAEQVKR
+AKEEGILFSAHLKATMMKVSDPVIFGHVVKAYFSELFEKYGEQLAAAGLSANNGLAAIEG
+GLDKLDAETAEGVRAAIAAAYENGPDVAMVNSAKGITNLHVPSDVIVDASMPAMIRNSGR
+MWNKHDQTQDTLAVIPDSSYAGVFQAVIDDCKANGAYDPTTMGTVPNVGLMAQKAEEYGS
+HDKTFIMDAAGTVAVKNSAGETLLSHDVEAGDIWRACQTKDVPVRDWVKLAVTRARASQT
+PAVFWLDETRAHDRELIKKVEEYLKEHDTEDLDIRILSPVEAAKLSVERIRRGEDTISVT
+GNVLRDYNTDLFPILELGTSAKMLSVVPLLNGGGLFETGAGGSAPKHVQQLVEENHLRWD
+SLGEFLALAVSFEHEAVANENHRARVLADTLDAATGTLLIEGKSPKRKVGELDNRGSHFY
+LALYWARELAKQTEDAELAAAAKPIAEELGAQEETILAELNGVQGSPVDLGGYYWPELEK
+VTSVMRPSATLNAIVDKLSV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001721.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001721.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6964c42a459987de8801fa21929ac6afaab14202
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001721.fa
@@ -0,0 +1,55 @@
+>0_2500
+MTSAQPTTTVLDTVPLKRALISVYDKTGLEELATGLHAAGVQIVSTGSTAQRIAAAGVPV
+TEVAEVTGFQECLDGRVKTLHPRVHAGILADRRREDHVAQLRDLEVEPFDLVVVNLYPFV
+DTVNSGAAEDAVVEQIDIGGPSMVRAAAKNHASVAIVVDPARYGEVVQAAQSGGFDLRAR
+RRLAALAFAHTAGYDNAVAAWTAAHFAEDTEQDDVPIFPPYAGFSLERAEILRYGENPHQ
+PAALYLDSSAAPGIAQAELLHGKPMSYNNYVDADAAVRAAFDHPAPAVAIVKHANPCGVA
+VTDEGADVAQAHAKAHACDPVSAFGGVIAANRPVTAVMAAQVKDVFTEVVVAPSFEPEAL
+QILTAKKNLRLLALPEGFVRDAVEAKQVSGGMLLQIADAVDADGDDPATWTLAAGAAADE
+ATLADLAFAWRAVRAAKSNAVLLAHDGATVGVGMGQVNRLDSCRLAVERANTLGAAQTGG
+QDVTTSEVTTAGGAENVSGEGAPERARGAVAASDAFFPFADGLQILIDAGVRAVVQPGGS
+VRDEEVVAAAEAAGVTLYLTGARHFFHG
+>1_380
+MLEDTRTPSKERPLVTSAQPTTTVLDTVPLKRALISVYDKTGLEELATGLHAAGVQIVST
+GSTAQRIAAAGVPVTEVAEVTGFQECLDGRVKTLHPRVHAGILADRRREDHVTQLRELEV
+EPFDLVVVNLYPFVDTVNSGAAEDAVVEQIDIGGPSMVRAAAKNHASVAIVVDPARYGEV
+VQAAQSGGFDLRARRRLAALAFAHTAAYDNAVAAWTAAHFGEDTHADEIPVFPPYAGFSL
+ERAQILRYGENPHQPAALYLDSSAAPGIAQAELLHGKPMSYNNYVDADAAVRAAFDHPVP
+AVAIVKHANPCGVAVTDEGTDIAQAHAKAHACDPVSAFGGVIAANRPVTAAMAAQAKDVF
+TEVVVAPSFEPEALEILTAKKNLRLLSLPEGFVRDAVEAKQVSGGMLLQITDAVDADGDD
+PATWTLAAGPAADEATLADLAFAWRAVRAAKSNAVLLAHDGATVGVGMGQVNRLDSCRLA
+VERANTLGAAQTGGQDVSTAGGAENVSGDGAPERARGAVAASDAFFPFADGLQILLDAGV
+RAVVQPGGSVRDEEVVAAAEAAGVTLYLTGARHFFHG
+>2_2369
+MSSAPSVTTVLDEVPLKRALISVYDKTGLEELATGLHAAGVQLVSTGSTAQRIAAAGVPV
+TEVSEVTGFQECLDGRVKTLHPRVHAGILADRRREDHVAQLADLDVEPFDLVVVNLYPFV
+ETVRSGADEDAVVEQIDIGGPSMVRAAAKNHASVAVVVDPARYVDVVAAAQAGGFDLRTR
+RRLASLAFAHTAAYDNAVAAWTAAHFGEDAEDEDAPVFPPYAGFSLERAATLRYGENPHQ
+PAALYVDHEAAPGIAQAELLHGKAMSYNNYVDADAAVRAAFDHAVPAVAIVKHANPCGVA
+VAGEGEDVAVAHAKAHACDPVSAFGGVIAANRPVTRAMAEQVAPIFTEVVVAPSFDEDAL
+EVLTAKKNLRLLALPEGFARDAVEAKQVSGGMLMQIADAVDADGDDPRTWTLAAGEAADE
+ATLADLAFAWRAVRAAKSNAVLLAHDGATVGVGMGQVNRLDSCRLAVERANTLGAAQTGG
+QDVSSAGGAENVSGEGAPERARGAVAASDAFFPFADGLQILVDAGVKAVVQPGGSVRDQE
+VVDAANAAGITMYLTGARHFFHG
+>3_113
+MTSAQPIPTVLDTVPLKRALISVYDKTGLEELATGLHAAGVQIVSTGSTAQRIAAAGVPV
+TEVAEVTGFQECLDGRVKTLHPRVHAGILADRRREDHVTQLRELEVEPFDLVVVNLYPFV
+DTVNSGAAEDAVVEQIDIGGPSMVRAAAKNHASVAIVVDPARYGEVVQAAQSGGFDLRAR
+RRLAALAFAHTAGYDNAVAAWTAAHFGEDTDADEIPVFPPYAGFSLERAQILRYGENPHQ
+PAALYLDSSAAPGIAQAELLHGKPMSYNNYVDADAAVRAAFDHPVPAVAIVKHANPCGVA
+VTDEGTDIAQAHAKAHACDPVSAFGGVIAANRPVTAAMAAQVKDVFTEVVVAPAFEPEAL
+EILSAKKNLRLLSLPEGFLRDAVEAKQVSGGMLLQIADAVDADGDDPATWTLAAGPAADE
+AVLADLAFAWRAVRAAKSNAVLLAHDGATVGVGMGQVNRLDSCRLAVERANTLGAAQTGG
+QDVSSAGGAENVSGEGAPERARGSVAASDAFFPFADGLQILIDAGVKAVVQPGGSVRDEE
+VVAAAEAAGVTLYLTGARHFFHG
+>4_386
+MTSAQSIPTVLDTVPLKRALISVYDKTGLEELATGLHAAGVQIVSTGSTAQRIAAAGVPV
+TEVAEVTGFQECLDGRVKTLHPRVHAGILADRRREDHVTQLRELEVEPFDLVVVNLYPFV
+DTVNSGAAEDAVVEQIDIGGPSMVRAAAKNHASVAIVVDPARYGEVVQAAQSGGFDLRAR
+RRLAALAFAHTAGYDNAVAAWTAAHFGEDTDADEIPVFPPYAGFSLERAQILRYGENPHQ
+PAALYLDSSAAPGIAQAELLHGKPMSYNNYVDADAAVRAAFDHPVPAVAIVKHANPCGLA
+VTDEGTDIAQAHAKAHACDPVSAFGGVIAANRPVTAAMAAQVKDVFTEVVVAPAFEPEAL
+EILSAKKNLRLLSLPEGFLRDAVEAKQVSGGMLLQIADAVDADGDDPATWTLAAGPAADE
+AVLADLAFAWRAVRAAKSNAVLLAHDGATVGVGMGQVNRLDSCRLAVERANTLGAAQTGG
+QDVSSAGGAENVSGEGAPERARGSVAASDAFFPFADGLQILIDAGVKAVVQPGGSVRDEE
+VVAAAEAAGVSLYLTGARHFFHG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001722.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001722.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6712028cfa93c23bd1bd4ee592c688c02aa12d75
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001722.fa
@@ -0,0 +1,45 @@
+>0_2501
+MQGRIFLIGGLGFMFDAWDVALNGVMIPLLREEWALAPADAAWIGTANLIGMAVGAFLWG
+TIADRIGRKAAFAWTLAIFSVFTLAGALTDSLLWFAVFRFVAGVGLGGTIPVDYALVGEF
+TPRRLRGRVLAAMDGWWPVGAALCGLVSAWLVGTWGDWRLPLLAMVLPALLVFVVRLGIP
+ESPLFLMSRGREAEARKVIDRMVEATGAERREYVMPPVEQERAGGVLAQLAAVWRFSPRI
+TAVTWALFVAIMVVYYIALQWLPTFLIDAGYAEGRAFIMTSGMAAAGLLGVVVATVLIEV
+TGRRWLLGVSAVVASALLVWLASVLGVPSAVLPLVLAFGFVVQIAIPVLYTYVSELYPTT
+LRASGFGWASAASRVGAGLGPLFFVGTLVPAMGLPAAFAVTGGLVLLACVAMLALAPETR
+GRALEVSAD
+>1_379
+MSSATPPRPSADGAHPGPAPDVVAPDAALPTGEAVVQELPWRWSVQGRIFLIGGLGFMFD
+AWDVTLNGVMIPLLREEWALDKADAAWIGTANLIGMAVGAFLWGTIADRIGRKAAFAWTL
+AIFSVFTIAGALTDSLLWFALFRFVAGMGLGGTIPVDYALVGEFTPRRLRGRVLAAMDGW
+WPVGAALCGLVSAWLVGTWGDWRLPLLAMVLPALLVFVVRLGIPESPLFLMSRGREAQAR
+AVIDRMVAATGAPRRPYTMPPAEPARSSGVGAQLAAVWRFSPRITAVAWALFVAIMLVYY
+IALQWLPTFLIDAGYAEGRAFIMTSGMAAAGLLGVVVATALIEVTGRRWLLAVSAVVASA
+LTVWLASVLDVPAAVLPLVLTFGFVVQVAIPVLYTYVSELYPTTLRASGFGWASAASRVG
+AGLGPLLFVGTLVPALGLPGAFAVTGGLVVLACAAMLALAPETRGRALEVSAD
+>2_2371
+MPPTGSHAASAAPTGEQVVQELPWRWPVQGRIFLIGGLGFMFDAWDVTLNGVMIPLLTEE
+WGLSKADAAWIGTANLIGMAVGAFLWGTVADQIGRKAAFTWTLLIFSVFTLAGALTDSLL
+WFAVFRFMAGIGLGGTVPVDYALVGEFTPRRLRGHVLTAMDGWWPIGAALCGVVSAWLVG
+TWSDWRLPLLAMVLPALLVFLVRLGIPESPLYLMSRGREREARAVIDRMVERTGAEPRPY
+VMPAADSRAHGGLLAQLAAVWRFSPRITATAWLLFVAVMLIYYIALQWLPTFLIEAGFAQ
+SRAFITTSGMAAAGLVGVAVSAVLVEATGRRRLLAVSGVVASGLLVWLASVLGVPGAALP
+LVLAYGFVIQIAVPVLYTYVSELYPTTLRASGFGWASAASRVGAGLGPLFFVGTLVPALG
+LPGAFGVTAGLVVVAVLVMFAWAPETRGRALEVAED
+>3_112
+MSSATPPRPSADGAHPGPTPDVVSPDAALPTGEAVVQELPWRWSVQGRIFLIGGLGFMFD
+AWDVTLNGVMIPLLREEWALDKADAAWIGTANLIGMAVGAFLWGTIADRIGRKAAFAWTL
+AIFSVFTIAGALTDSLLWFALFRFVAGVGLGGTIPVDYALVGEFTPRRLRGRVLAAMDGW
+WPVGAALCGLVSAWLVGTWGDWRLPLLAMVLPALLVFVVRLGIPESPLFLMSRGREAQAR
+AVIDRMVAATGAPRRPYTMPPAEPARSGGVGAQLAAVWRFSPRITAVAWALFVAIMLVYY
+IALQWLPTFLIDAGYAEGRAFIMTSGMAAAGLLGVVVATALIEVTGRRWLLAVSAVVASA
+LTVWLASVLDVPAAVLPLVLAFGFVVQVAIPVLYTYVSELYPTTLRASGFGWASAASRVG
+AGLGPLLFVGTLVPALGLPGAFAVTGGLVVLACAAMLALAPETRGRALEVSAD
+>4_385
+MSSATPPHPSADGAHPGPTSDVVAPDATLPTGEAVVQELPWRWSVQGRIFLIGGLGFMFD
+AWDVTLNGVMIPLLREEWALDKADAAWIGTANLIGMAVGAFLWGTIADRIGRKAAFAWTL
+AIFSVFTIAGALTDSLLWFALFRFVAGMGLGGTIPVDYALVGEFTPRRLRGRVLAAMDGW
+WPVGAALCGLVSAWLVGTWGDWRLPLMAMVLPALLVFVVRLGIPESPLFLMSRGRETQAR
+AVIDRMVAATGAPRRPYTMPPAEPARSGGVGAQLAAVWRFSPRITAVAWALFVAIMLVYY
+IALQWLPTFLIDAGYAEGRAFIMTSGMAAAGLLGVVVATALIEVTGRRWLLAVSAVVASA
+LTVWLASVLDVPAAVLPLVLTFGFVVQVAIPVLYTYVSELYPTTLRASGFGWASAASRVG
+AGLGPLLFVGTLVPALGLPGAFAVTGGLVVLACAAMLALAPETRGRALEVSAD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001723.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001723.fa
new file mode 100644
index 0000000000000000000000000000000000000000..522985f3e551642d4e1731a6450c03b563c42275
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001723.fa
@@ -0,0 +1,25 @@
+>0_2502
+MRIVALVSGSGTNLQAVLDAVASGALDVEIAAVGADVADAGGLERARAHGIETFVVSPRD
+HADRHAWDVALADAVAAHEPDWVLCSGFMRILGAPLLERFEGRILNTHPALLPSFPGAHG
+VRDALAHGVKVSGCTVHVVDAGVDTGPILAQAAVPVLDTDTESELHERIKVQERALLLRV
+LGELSRR
+>1_378
+MRIVALVSGSGTNLQAVLDAVASGALDMEIAAVGADVADAGGLERARAHGIETFVVSPKD
+HADRRAWDEALADAVAAYAPDWVVCSGFMRILGAPLLERFDGRILNTHPALLPSFPGAHG
+VRDALAHGVKVTGCTVHVVDAGVDTGPILAQAAVPVLDTDTEAELHERIKVQERALLLRV
+LGELSRR
+>2_2373
+MRILALVSGSGTNLQAVLDAVASGALPLEVAAVGSDVPGVQGLARAEAAGIPTFTVAPAD
+HPDRAAWNVALAEAVAAYEPDWVVCSGFMRILGAPLLEAFPGRIVNTHPALLPSFPGAHG
+VRDALAYGVKVTGCTVHLVDAGVDTGPILAQAAVPVLDTDTEEVLHERIKVQERVLLLRV
+LGELAAGRSPRQA
+>3_111
+MRIVALVSGSGTNLQAVLDAVASGALDMEIAAVGADVADAGGLERARAHGIETFVVSPKD
+HADRRAWDEALADAVAAYAPDWVVCSGFMRILGAPLLERFDGRILNTHPALLPSFPGAHG
+VRDALAHGVKVTGCTVHVVDAGVDTGPILAQAAVPVLDTDTEAELHERIKVQERALLLRV
+LGELSRR
+>4_384
+MRIVALVSGSGTNLQAVLDAVASGALDVEIAAVGADVADAGGLERARAHGIETFVVSPKD
+HADRRAWDEALADAVAAYAPDWVVCSGFMRILGAPLLERFEGRILNTHPALLPSFPGAHG
+VRDALAHGVKVTGCTVHVVDAGVDTGPILAQAAVPVLDTDTEAELHERIKVQERALLLRV
+LGELSRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001724.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001724.fa
new file mode 100644
index 0000000000000000000000000000000000000000..be0b7c5b46146fcb732083bad7f8561b684b7b67
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001724.fa
@@ -0,0 +1,19 @@
+>0_2503
+MVLSLSLVLPWKLAALVLGLVALVLGVRVWLTSRGERRAGLPRAVAAGGMALALFGTTTA
+ALPLLAWDATVELERCTSSALTVRAQQACADAFTRAVEERTGVPQLRP
+>1_377
+MSAPVPSSPPRPPQGAPDPGRVRTGRALLWQSVALLGMVLSFSLVLPWKLIALALGLVAL
+VLGVRVWVTSRGAERSGLPRAVASAGMAMALMGMTTAALPLLAWDATVQLEQCGASALTV
+RAQQACADEFTRQVEERTGVPQLRP
+>2_2374
+MSALPPVPPSAPDRRPADAAARARVGRLLVAQSAALLAMLGAFTLVLPFKVLTLAAALAA
+LVLGVLVFTASRRTAQSLVPRAAAGAGMALALMGLTVGVFPLLLWNETAGFERCTASAVT
+VRAQQTCADDFTATVERRTGVAQLGG
+>3_110
+MSAPVPSSPPRPPQGAPDPGRVRTGRALLWQSVALLGMVLSFSLVLPWKLIALALGLVAL
+VLGVRVWVTSRGAERSGLPRAVASAGMAMALMGMTTAALPLLAWDATVQLEQCGASALTV
+RAQQACADEFTRQVEERTGVPQLRP
+>4_383
+MSAPVPSSPPRPPQGAPDPGRVRTGRALLWQSVALLGMVLSFSLVLPWKLIALALGLVAL
+VLGVRVWVTSRGAERSGLPRAVASAGMAMALMGMTTAALPLLAWDATVQLEQCSASALTV
+RAQQACADEFTRQVEERTGVPQLRP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001726.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001726.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e3d8d09d855536158ca1b68ee47202b2bf59d2cd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001726.fa
@@ -0,0 +1,40 @@
+>0_2505
+MVAESFLPHMNGVTHSILQVLRHLRERGDEAIVIAPAASWSAGWTQRAGEGQAPREVEGF
+PVHALPSVPLSGYSSVRVAAGTVGRLRGILTAFGPDVVHIASPFVLGWRAVQAAEELGIP
+SVAVYQTEVPGYAARYGAPWLEDVLWSHVARLHNTATLTLAPSSFTVRQLHAAGLRRVHL
+WGRGVDTRRFHPVKRDDALRAELAPHGERLIGFVGRLAHEKQVEDLRVLSDLPGTRLVVI
+GSGPLREQLERRLPGAHFAGFQGGEDLARHVASLDLFVHPGESDTFGQTLQEAMASGVPV
+VAVGRGGPLDIVDPSRTGWLYPPGELDELRRHVADLAHDDVKRSAFAQAAWASVQGRTWP
+VLCEQLVGCYEKAVAVQDRRRRELARRLLAMPSQLTARVFG
+>1_375
+MRVVVVAESFLPHMNGVTNSILQVLRHLRERGDEAMVVAPAASWSAGWTQRAGAGEAPRE
+VEGFPVRTLPSVPLTGYTSVRVAAGTVGRLRGMLADFAPDVVHIASPFVLGWRAVQAAEE
+LGIPSVAVYQTEVPGYAARYGAPWLEDVLWSHVARLHNMATLTLAPSSFTVRQLHRQGVR
+RVHLWGRGVDSRRFHPAKRDEALRAELAPNGEKLVGFVGRLAHEKQVGDLRVLSDLPGTR
+LVVIGSGPLREQLERELPGAHFAGFQGGEDLARHVASLDLFVHPGESDTFGQTLQEAMAS
+GVPVVAVGRGGPLDIVDASRTGWLYPPGELDELRRHVADLVYDDVKRAAFADAAWASVQG
+RTWPVLCEQLMGYYEKAIAVQERRRVELARRLLTAPALLAARVFG
+>2_2376
+MRVAVIAESFLPHMNGVTNSILQVLKHLRSRGDEAVVIAPAASWSAGWTQRAGAGQAPSE
+VEGFPVITLPSMPLSGYASVRVAAGTVLRLRSLLADFAPDVVHIASPFVLGWRAVQAAEE
+LGIPSVAVYQTEVPRYAAKYGAPWLEDVLWNHVTRLHNTATLTLAPSSFTLRQLHHVGVR
+RVHLWGRGVDSTRFHPAKRDEALRAELAPNGERLIGFVGRLAHEKQVADLRVLADLPDTR
+LVIIGSGPLRDQLERRLPGAHFAGFQGGEDLARHVASLDLFVHPGESDTFGQTLQEAMAS
+GVPVVAVGRGGPLDIVDSSRTGWIYQPGDLGELRARVADLAYDDAKRAAFAEAAWASMQG
+RTWPVLCEQLVGYYEKAIHVQRRRRGELSRRLLGAPGAVASRAYRVFG
+>3_108
+MRVVVVAESFLPHMNGVTNSLLQVLRHLRERGDEAMVVAPAASWSAGWTQRAGAGEAPRE
+VEGFPVRTLPSVPLTGYTSVRVAAGTVGRLRGMLADFAPDVVHIASPFVLGWRAVQAAEE
+LGIPSVAVYQTEVPGYAARYGAPWLEDVLWSHVARLHNMATLTLAPSSFTVRQLHRQGVR
+RVHLWGRGVDSRRFHPAKRDEALRAELAPNGEKLVGFVGRLAHEKQVGDLRVLSDLPGTR
+LVVIGSGPLREQLERELPGAHFAGFQGGEDLARHVASLDLFVHPGESDTFGQTLQEAMAS
+GVPVVAVGRGGPLDIVDASRTGWLYPPGELDELRRHVADLVYDDVKRAAFADAAWASVQG
+RTWPVLCEQLMGYYEKAIAVQERRRVELARRLLTAPALLAARVFG
+>4_381
+MRVVVVAESFLPHMNGVTNSILQVLRHLRERGDEAMVVAPAASWSAGWTQRAGAGEAPRE
+VEGFPVRTLPSVPLTGYTSVRVAAGTVGRLRGMLADFAPDVVHIASPFVLGWRAVQAAEE
+LGIPSVAVYQTEVPGYAARYGAPWLEDVLWSHVARLHNMATLTLAPSSFTVRQLHRQGVR
+RVHLWGRGVDSRRFHPAKRDEALRAELAPNGEKLVGFVGRLAHEKQVGDLRVLSDLPGTR
+LVVIGSGPLREQLERELPGAHFAGFQGGEDLARHVASLDLFVHPGESDTFGQTLQEAMAS
+GVPVVAVGRGGPLDIVDASRTGWLYPPGELDELRRHVADLVYDDVKRAAFADAAWASVQG
+RTWPVLCEQLVGYYEKAIAVQERRRVELARRLLTAPSLLAARVFG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001729.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001729.fa
new file mode 100644
index 0000000000000000000000000000000000000000..52235129ba51be8245a21694a01888d499176815
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001729.fa
@@ -0,0 +1,41 @@
+>0_2509
+MSAVSDAAPVSPRRTRLAALGDPTPVENVATHLQEGWNRWHRSRALRAGHVPTIMAFTGY
+GSTSWVRILSRVVIAPDEEFLNGRRISKVVADGVRGWRNFVAPPMAYAEVEVEVGGTRTT
+VRTDRMGVVDAVLDVEMEPGWRTATLHVGDDEHVTMDLYICHPDARIGLVSDIDDTVVVT
+SLPRPLLAAWNSFVIDEHARTPTPGMAVLLRRVAELEPKAPVLYLSTGAWNVAQTLTRFL
+GRNLYPLGALLLTSWGPTKDRWFRSGQEHKKTQLERLAEQFPDIKWILVGDDGQHDPEIY
+ADFAQRHPDRVAAIVIRQLTPSEALLAGGRAEDTRRSTPGIPWCYGPDGASLSNQLEDLG
+ILPVGFVDVQPEGWKEDILGDDEVLSAAEHGAAALGDEADAPDTAAEPRVPAGEAAVGDG
+AADEAEAAEAGGSR
+>1_370
+MPAASDAPTPAPRRGRLAPSGDPTPVENVATHLQEGWNRWHRARALRAGNVPTVMAFTGY
+GSTSWVRILSRVVIASDEEFMNGRRLSKVVADGVRGWRNFVAPPMAYAEVEVQVGDLRTT
+VRTDRMGVVDVVLDVELEPGWQTATLHVGGQEEHAVMDLYICEPGARIGLVSDIDDTVVV
+TSLPRPLLAAWNSFVIDEHARTPTPGIAVLLRRIAELEPKAPVLYLSTGAWNVAQTLTRF
+LGRNLYPLGALLLTSWGPTRDRWFRSGQEHKRVQLERLAEQFPDIQWILVGDDGQHDPEI
+YAEFAQRHPDRVKAIVIRQLTPSQALLAGGRAEDTRRSTPGIPWCYGPDGATLSNQLEDL
+GILPVEFVDVQPEAWREDILGDDEAPATLDAAAQRDDRSTDEEAAR
+>2_2380
+MPASESASIAAQNDPARRQRLAAAGGPTPAENVATHLQEQWNRWHRSRALRRGFVPTVMA
+FTGYGTTSWVRVLSRVVLAKDEDFLNGRRLSKVVADGVHGWRNFVAPPMAYAEVEVEVGD
+LVTTVRADRMGVVDVVLDVELEPGWRTAVLRVGDEEEVTTDLYIASPDAKVGLVSDIDDT
+VVVTSLPRPLLAAWNSFVIDEHARTPTPGMAVLLRRIAAAEPMAPVLYLSTGAWNVAQTL
+TRFLGRNLYPLGALLLTSWGPTKDRWFRSGQEHKVTQLERLAQQFPDLQWILVGDDGQHD
+PEIYADFATKHPDKVKAIVIRQLTPSEALLAGGRAEATRHSTPGIPWCYGPDGAALSNQL
+EDLGILPVDFVDVHPEGWLEDILGEDEASAAGRDGDEHGVHGGRADQDEARDVDVSAQD
+>3_103
+MPAASDAPTPAPRRGRLAPSGDPTPVENVATHLQEGWNRWHRARALRAGNVPTVMAFTGY
+GSTSWVRILSRVVIASDEEFMNGRRLSKVVADGVRGWRNFVAPPMAYAEVEVQVGDLRTT
+VRTDRMGVVDVVLDVELEPGWQTATLHVGGQEEHAVMDLYICEPGARIGLVSDIDDTVVV
+TSLPRPLLAAWNSFVIDEHARTPTPGIAVLLRRIAELEPKAPVLYLSTGAWNVAQTLTRF
+LGRNLYPLGALLLTSWGPTRDRWFRSGQEHKRVQLERLAEQFPDIQWILVGDDGQHDPEI
+YAEFAQRHPDRVKAIVIRQLTPSQALLAGGRAEDTRHSTPGIPWCYGPDGATLSNQLEDL
+GILPVEFVDVQPEAWREDILGDDEAPATLDAPGQRDGRPADEEAAR
+>4_376
+MPAASDAPTPAPRRGRLAPSGDPTPVENVATHLQEGWNRWHRARALRAGNVPTVMAFTGY
+GSTSWVRILSRVVIASDEEFMNGRRLSKVVADGVRGWRNFVAPPMAYAEVEVQVGDLRTT
+VRTDRMGVVDVVLDVELEPGWQTATLHVGGQEEHAVMDLYICEPGARIGLVSDIDDTVVV
+TSLPRPLLAAWNSFVIDEHARTPTPGIAVLLRRIAELEPKAPVLYLSTGAWNVAQTLTRF
+LGRNLYPLGALLLTSWGPTRDRWFRSGQEHKRVQLERLAEQFPDIQWILVGDDGQHDPEI
+YAEFAQRHPDRVKAIVIRQLTPSQALLAGGRAEDTRHSTPGIPWCYGPDGATLSNQLEDL
+GILPVEFVDVQPEAWREDILGDDEAPATLDAAAQRDGRSADEEAAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001731.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001731.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0a902dca8adc4573d68a60489d817c7b68a74261
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001731.fa
@@ -0,0 +1,20 @@
+>0_2512
+MTPQHHDTADAPSMQRPDPVAEPGDHLMFEHPDGEPVLVLDEDQVWRLLRRVRHARLGLA
+VDGRPDIVPVNVRAHDGAIYFRTAPGSKLAELTVNPRVVVQADGILADQAWSVLVHGTAR
+RLDTEAEIAEAESLGIEPWVPTLKDFYVRVDVQRVSGRHFVFGTHPERNESQTD
+>1_367
+MTQQHHDTDDAPSMQRPDPVAEPGDHLMFEHPDGEAVLVLDEDQVWRLLGRVGHARLGLA
+VDGRPDIVPVNVRAHDGAIYFRTAPGSKLAELTVNPRVVVQADGILADQAWSVLVHGTAR
+RLDTEAEIAEAESLGIEPWVPTLKDFYVRVDVQRVSGRHFVFGPHPERNESQTD
+>2_2383
+MTEHTTPSMQRPDPAVGPGSMFPHPEGEPVLKLTDEQIWKLMRGVRHARLGLAVGGEPDI
+VPVNVRAVDGVVWFRTAPGSKLAELTVNPRVVVQADGILSDQAWSVLLHGTARRADTAEE
+IAEAESMGIRPWVPTIKDFYVKVEVDSATGRHFLLGEQPERDGAEPTD
+>3_100
+MTQQHHDTDDAPSMQRPDPVAEPGDHLMFEHPDGEAVLVLDEDQVWRLLRRVRHARLGLA
+VDGRPDIVPVNVRAHDGAIYFRTAPGSKLAELTVNPRVVVQADGILADQAWSVLVHGTAR
+RLDTEAEIAEAESLGIEPWVPTLKDFYVRVDVQRVSGRHFVFGPHPERNESQTD
+>4_373
+MTQQHHDTDDAPSMQRPDPVAEPGDHLMFEHPDGEAVLVLDEDQVWRLLGRVGHARLGLA
+VDGRPDIVPVNVRAHDGAIYFRTAPGSKLAELTVNPRVVVQADGILADQAWSVLVHGTAR
+RLDTEAEIAEAESLGIEPWVPTLKDFYVRVDVQRVSGRHFVFGPHPERNESQTD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001732.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001732.fa
new file mode 100644
index 0000000000000000000000000000000000000000..13cefa5affce819b7e2e114cbaf53bc757fac614
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001732.fa
@@ -0,0 +1,35 @@
+>0_2514
+MLEIPRVEDNGRLGPVNSALVPRYGGAPTYALLPRLDEAAAAGVAPEIKVVGVPFDAGVS
+YRPGARFGSGHVRQSSRLLRPYNPATDTSPFAQSQVVDAGDMAVNPFNIGEAIEAIQQDA
+MDLTEDGASLMTIGGDHTIALPLLRAASARAGEPVALLHFDAHLDTWDTYFAAEYTHGTP
+FRRAVEEGILDTEAISHVGTRGPLYGKKDLDDDHRMGFGIVTSSDVFRKGVDEIVDQLRQ
+RIGDRPLYISVDIDVLDPAHAPGTGTPEAGGITSRELLEILRGLRGLDIVGADLVEVAPA
+YDHAELTGVAASHVAYDLITLMADRRASRAAAGEEQGR
+>1_364
+MLEIPRVEDNGRLGPVNSALVPRYGGTPTYALLPRLDEAAAAGVAPEIKVVGVPFDAGVS
+YRPGARFGSGHVRQSSRLLRPYNPATDTSPFAQAQVVDAGDMAVNPFDIGEAIEAIQQDA
+MDLTEDGSSLMTIGGDHTIALPLLRAASARAGEPVALLHFDAHLDTWDTYFGAEYTHGTP
+FRRAVEEGILDTEAISHVGTRGPLYGKKDLDDDHRMGFGIVTSSDVFRQGVDEIVDQLRQ
+RIGGRPLYISVDIDVLDPAHAPGTGTPEAGGITSRELLEILRGLRGLDIVGADLVEVAPA
+YDHAELTGVAASHVAYDLISLMADRRATRAAAGEESAR
+>2_1718
+MLEIPRVEDNGRLGPVNSALVPRYGGAPTYALLPRLDEAAAAGVAPEIKVVGVPFDAGVS
+YRPGARFGSGHVRQSSRLLRPYNPATETSPFAQAQVVDTGDMAVNPFHIGEALESIQQDA
+MDLTEDGASLMTIGGDHTIALPLLRAASARAGEPVALLHFDAHLDTWDTYFGAAYTHGTP
+FRRAVEEGILDTEAISHVGTRGPLYGKKDLDDDHRMGFGIVTSSDVFRKGVDEIVDQLRQ
+RIGGRPLYISVDIDVLDPAHAPGTGTPEAGGLTSRELLEILRGLRGLDIVGADLVEVAPA
+YDHAELTGVAASHVAYDLISLMADRRATRAAAEGGVDA
+>3_97
+MLEIPRVEDNGRLGPVNSALVPRYGGTPTYALLPRLDEAAAAGVAPEIKVVGVPFDAGVS
+YRPGARFGSGHVRQSSRLLRPYNPATDTSPFAQAQVVDAGDMAVNPFDIGEAIEAIQQDA
+MDLTEDGSSLMTIGGDHTIALPLLRAASARAGEPVALLHFDAHLDTWDTYFGAEYTHGTP
+FRRAVEEGILDTEAISHVGTRGPLYGKKDLDDDHRMGFGIVTSSDVFRQGVDEIVDQLRQ
+RIGGRPLYISVDIDVLDPAHAPGTGTPEAGGITSRELLEILRGLRGLDIVGADLVEVAPA
+YDHAELTGVAASHVAYDLISLMADRRATRAAAGEESAR
+>4_370
+MLEIPRVEDNGRLGPVNSALVPRYGGAPTYALLPRLDEAAAAGVAPEIKVVGVPFDAGVS
+YRPGARFGSGHVRQSSRLLRPYNPATDTSPFAQAQVVDAGDMAVNPFDIGEAIEAIQQDA
+MDLTEDGSSLMTIGGDHTIALPLLRAASARAGEPVALLHFDAHLDTWDTYFGAEYTHGTP
+FRRAVEEGILDTEAISHVGTRGPLYGKKDLDDDHRMGFGIVTSSDVFRQGVDEIVDQLRQ
+RIGGRPLYISVDIDVLDPAHAPGTGTPEAGGITSRELLEILRGLRGLDIVGADLVEVAPA
+YDQAELTGVAASHVAYDLISLMADRRATRAAAGEEPGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001734.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001734.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6feb0b95a0a9874516ac1d0506ccafc70511054f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001734.fa
@@ -0,0 +1,50 @@
+>0_2516
+MTLNLTIVAVYLVGMLAFGWWGKTRAASSEDYLVAGRRLGPVLFTGTMAAVVLGGAATVG
+GVGLGYEFGLSGAWLVAAIGVGVLILSVAFAPILARLKIYTVSQMLRLRYGRGGASHASS
+FVMLAYTLMLAATSTGAYASIFVVLFGWDRWLSVLVGGGIVLAYSVLGGMWSITLADMAQ
+FLIMTIGLFALMLPLSLANAGGWSAMQERLGAEFFSWDGIGVQSIVTYFVIYTLGLLVGQ
+DVWQRVFTARSPRVAQVGGATAGLYCIVYGVAGALIGMAARTVTADIATTDDVFAWVAQN
+LLPVGVGGVALAAAVAAMMSTASGAIIAASTVMRTDILPILRGEATAAEDGATAEDEAPE
+TAAELASNRGWVLLLGAVVLGLAIVVPDVVAALTIAYDILVGGLFVAIVGGLVWKRGTGT
+AALWSMVVGTLGTLGTMGWLELNAAEPFEGVFANEPIYVGLAASAVVYVLLSLMTRPTDP
+AVLEAWRVRSRHGVDAAARERL
+>1_362
+MTLNLTIVAVYLVGMLAFGWWGKTRAASSEDYLVAGRRLGPVLFTGTMAAVVLGGAATVG
+GVGLGYEFGLSGAWLVAAIGVGVLILSVAFAPILARLKIYTVSQMLRLRYGRGGASHASS
+FVMLAYTLMLAATSTGAYASLFVVLFGWDRWLSVLVGGGIVLAYSVLGGMWSITLADMAQ
+FLIMTIGLFALMLPLSLANAGGWSAMQERLGAEFFSWDGIGVQSIVTYFVIYTLGLLIGQ
+DVWQRVFTARSPRVAQIGGATAGLYCIVYGVAGAVIGMAARTVTADIAATDDVFAWVAQN
+LLPVGVGGVALAAAVAAMMSTASGAIIAASTVMRTDILPILRGEATAAEDGAVAEDAATE
+TAAELASNRGWVLLLGAVVLGLAIVVPDVVAALTIAYDILVGGLFVAIVGGLVWKRGTGT
+AALWSMVVGTVGTLGTMGWLELNAAEPFEGVFANEPIYVGLAASAVVYVLLSLMTRPTDP
+AVLEAWRVRSRHGVDPAVRAQV
+>3_86
+MTDTTVPLIILALYIVFVVGVGIYARRKATSDSSRDYLTGSGDVGVWVNGFAIFAAFATG
+GTMLGNIGLSYVGGWGYITAYNAGVALGYVITTFFLAKTLKNMNVATVPEFIRKRFHGRT
+LNILVPIILMATLVAYVVAQMKVGGLLGEQLFGFPYEWSVIVVGLVYIFYTFYGGMRAVT
+LTDFVQGLLMISVVVICGGIAFGQHGGPANLYEMAVAIRPKWEGTEQFPLISYIGAFIIW
+ATVNAVLPHTVMRIFAAKNERQGRASLAIGLGLYVLTAIATTIFVVAAVIIVQGEEELAS
+ADSTFLIFLAEQTPSWVAGLAFAGIFAAVMSSVSAMLLALGGAFAYDLVAELRPSMSDRS
+KRRLTSISVLGFGILTLVLSLNPPELLTLLYTAAMGMLASGLFFPTLLGIWWKRMNSSGA
+LAGLIVGVGSYLFLLWGTGMPSLSQVTVSIPLSLLACIVVSLMTKPPTDAEMERITIAHE
+REFLIQGQDDLIETAERH
+>3_95
+MTLNLTIVAVYLVGMLAFGWWGKTRAASSEDYLVAGRRLGPVLFTGTMAAVVLGGAATVG
+GVGLGYEFGLSGAWLVAAIGVGVLILSVAFAPILARLKIYTVSQMLRLRYGRGGASHASS
+FVMLAYTLMLAATSTGAYASIFVVLFGWDRWLSVLVGGGIVLAYSVLGGMWSITLADMAQ
+FLIMTIGLFALMLPLSLANAGGWSALKERLGAEFFSWDGIGVQSIVTYFVIYTLGLLIGQ
+DVWQRVFTARSPRVAQIGGATAGLYCIVYGVAGAVIGMAARTVTADIATTDDVFAWVAQN
+LLPVGVGGVALAAAVAAMMSTASGAIIAASTVMRTDILPIFRGEATASEDGATAEDEIPE
+TAAELASNRGWVLLLGAVVLGLAIVVPNVVAALTIAYDILVGGLFVAIVGGLVWQRGTGT
+AALWSMVVGTVGTLGTMGWLELNAAEPFEGVFANEPIYVGLAASAVVYVLLSLMTRPTDP
+AVLEAWRVRSRHGVDPAVRAQV
+>4_368
+MTLNLTIVAVYLVGMLAFGWWGKTRAASSEDYLVAGRRLGPVLFTGTMAAVVLGGAATVG
+GVGLGYEFGLSGAWLVAAIGVGVLILSVAFAPILARLKIYTVSQMLRLRYGRGGASHASS
+FVMLAYTLMLAATSTGAYASIFVVLFGWDRWLSVLVGGGIVLAYSVLGGMWSITLADMAQ
+FLIMTVGLFALMLPLSLANAGGWGAMQERLGAEFFSWDGIGVQSIVTYSVVYTLGLLIGQ
+DVWQRVFTARSPRVAQIGGATAGLYCIIYGVAGAVIGMAARTVTADIATQDDVFAWVAQN
+LLPVGVGGVALAAAVAAMMSTASGAIIAASTVMRTDILPILRGEATASEDGATAGDEAPE
+TAAELASNRGWVLLLGAVVLGLAIVVPDVVAALTIAYDILVGGLFVAIVGGLVWKRGTGT
+AALWSMVVGTVGTLGTMGWLELNAAEPFEGVFANEPIYVGLAASAVVYVLLSLMTPPTDP
+AVLEAWRVRSRHGVDAVAGASLTRNPGACDPPMPARWSGQTMRRRAILPQAPPGP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001737.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001737.fa
new file mode 100644
index 0000000000000000000000000000000000000000..36a73442b40ca280f2ba63a442e92d7e0a708db9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001737.fa
@@ -0,0 +1,20 @@
+>0_2519
+MDAAETPEGPEATAYDGGRPAWQHRLLAGGDEPDPRFTLANERTFLAWVRTALALLAGGV
+AVEAFTGALFAPPVRVALSTVLLVLAALLAVGAGARWLRVERAMRRGRPLPLPLIVPVLA
+GGVVLAVVVLMLAVVLPRG
+>1_359
+MDAAETPDGPETAAHDGGRPAWQHRLLAGGEEPDPRFTLANERTFLAWVRTALALLAGGV
+AVEAFTGALFAPPVRVVLSTVLLVLAALLALGAGARWLRVERAMRRGRPLPLPLIVPVLA
+GGVVLAVVVLLAAVVLPRG
+>2_2391
+MDAAETPDGPEAAAYDGGRPAWQHRLLAGGDEPDPRFTLANERTFLAWVRTALALLAGGV
+AVEAFTGALFAPPVRVALSTVLLVLAALLALGAGARWLRVERAMRRGRPLPLPLIVPVLA
+GGVVLAVVVLMLAVVLPRG
+>3_92
+MDAAETPDGPETAAHDGGRPAWQHRLLAGGEEPDPRFTLANERTFLAWVRTALALLAGGV
+AVEAFTGALFAPPVRVVLSTVLLVLAALLALGAGARWLRVERAMRRGRPLPLPLIVPVLA
+GGVVLAVVVLMLAVVLPRG
+>4_365
+MDAAETPDGPETAAHDGGRPAWQHRLLAGGEEPDPRFTLANERTFLAWVRTALALLAGGV
+AVEAFTGALFAPPVRVVLSTVLLVLAALLALGAGARWLRVERAMRRGRPLPLPLIVPVLA
+GGVVLAVVVLLAAVVLPRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001741.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001741.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2cc4407c0289c4646eda474c1ddd54b60f1b9032
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001741.fa
@@ -0,0 +1,79 @@
+>0_2536
+MPTAVTRAAADPEAWGGDPESWGRDAAPAHTPDSLVAGLNPQQSAAVTHTGAPLLIVAGA
+GSGKTRVLTHRIAWLLATGRARPHEILAITFTNKAAAEMRERVSGLIGPTAQRMWISTFH
+SSAVRLLRNEAANIGLKSTFTIYDSADSLRLVTTIAKLHELDPKRFAPKALLNRISSLKN
+ELVEADDYASTVAEGDPWGRAVAAVYRDYTARLRQANALDFDDLIGMTVHMFEAFPRVLD
+NYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAGEPEGVDTPGGELTVVGDSDQSIYAFRG
+ADIRNIVEFEQDFTDAVTIKLEQNYRSTQTILDAANAVISNNPDRRKKDLWTAEGAGAAI
+VGYAAENESAEAEWIASTIDRLQDEDGIRPADVAVFYRTNAQSRALEERLVTRGIPYRVI
+GGTRFYDRKEIKDALAYLRVIVNPDDDVNVRRILNEPKRGIGDRAEGAVAAWAERNRTTF
+SAALRDAEHAPGMATRSLKAVNGFVQMMDDLAQVAESAGPATVLEAVLEQSGMLAALRES
+EDLQDESRADNLGELVAVVRSFEKTTPDGTLSDFLEQVALVADADQLPTAPDVEGESLAE
+AQGQVTLMTLHTAKGLEFPVVFLTGMEHGVFPHARSMTDEKELAEERRLAYVGLTRARRR
+LFLTRAEARSLWGQHQFNPPSQFLGEIPEALIDWEREGAVRSAGSLSLTGAGTSRYAGRF
+GSGGGRPAWRSRDDDGGARPQRLTRGDEPTDLTVPSAVVRGRAPSRVQPQKEIVALSPGD
+RVSHATFGQGRVDAVAGAGDKTVATVTFEDSGAQKRLLLRYAPLTKVED
+>1_349
+MADLFSALGRTHLNLDRTRRPADPETALPGLVPPAVTRAAADPEAWGVDARPAAPSHTPE
+SLVAGLNPQQAAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAITFTN
+KAAAEMRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYDSADSLRLVT
+TVAKQHELDPKRFAPKALLNRISSLKNELVEADDYAATVAEGDPWGRAVAAVYRDYTARL
+RQANALDFDDLIGVTVHMFEAFPRVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAG
+DPEGVETPGGELTVVGDSDQSIYAFRGADIRNIVEFEQDFTDAVTIKLEQNYRSTQTILD
+AANAVIERNPDRRPKRLWTAEGEGPAIVGYAAENESAEAEWIATTIDRLQDEDGIRPADV
+AVFYRTNAQSRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDDVNVRRI
+LNEPKRGIGDRAEGAVAAWAERNRSTFSAALRDAENAPGMAARSLKAVRGFVQMMDDLGQ
+VAESAGPATVLEAVLEQSGMLAALRESEDVQDESRADNLGELVAVVRSFETTHPDGTLSD
+FLEQVALVADADQLPTAPDVEGEALAEQQGQVTLMTLHTAKGLEFPVVFLTGMEHGVFPH
+ARSMTDEKELAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEIPETLID
+WEREGTTRSAGSLSLTGAGTSRYAGRFGGGRPAWRSRDDDGARPQRLTRGDEPADLTVPS
+AVVRGKAPSRVQPQKEIVALSPGDRVSHATFGEGRVDAVAGAGDKTVATVTFDATGAQKR
+LLLRYAPLTKVEG
+>2_2395
+MADLFSSLGRDPLFAPRTRPADPETALPGLVPTAVTRAADPEAGAWGAGRDAGAPSAGPL
+TPEGLVEGLNPQQAAAVQHTGSPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEVLAIT
+FTNKAAAEMRERIAGLIGDTARRMWISTFHSSCVRILRNEAANIGLKSTFTIYDSADSLR
+LVTQIAKVQDLDPKRFAPKALLSRISALKNELVDPEDHASRVAEGDPWGRAVAAVYTEYT
+ARLRQANALDFDDLIGMTVHMFEAFPRVLDGYRRRFRHVLVDEYQDTNHAQYRLIRLLSG
+PAGEPEGVDTPGGELTVVGDSDQSIYAFRGADIRNIVEFEQDFTDAATIKLEQNYRSTQT
+ILDAANAVIAHNPDRRKKDLWTAEGEGPRIIGYAAENESAEAEWIASTIDRLQDEEGIRP
+ADVAVFYRTNAQSRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDDVNV
+RRILNEPKRGIGDRAEGAVAAWAERNRVPFFTALRDAENAPGMATRSLKAVQGFVQLMDD
+LAQVAESAGPATVLEAVLEQSGMLAALRESEDLQDESRADNLGELVAVVRAFEKGTPGGT
+LTDFLEQVALVADADQLPAAPDVEGEELAEQQGQVTLMTLHTAKGLEFPVVFLTGMEHGV
+FPHSRSLTDEKEMAEERRLAYVGITRARRRLHLSRAEARSLWGQHQFNPPSQFLGEIPDE
+LIEWERAGTDRSFGGLTSLAGAGTSRYANRFSGGGSGSARRGSMTGAWGDRAAGGVGGGL
+ASNRPQRLTRGEEAADLTVPSSVVRGRAPSRVQPQKEVVALSAGDRVEHATFGAGRVDAV
+AGTGDKTVATVTFDATGAQKRLLLRYAPLTRVEG
+>3_74
+MADLFSALGRTPLNLDRTRRPADPETALPGLVPPAVTRAAADPEAWGEDARPAAPAHTPE
+SLVAGLNPQQAAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAITFTN
+KAAAEMRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYDSADSLRLVT
+TVAKQHELDPKRFAPKALLNRISSLKNELVEADDYAATVAEGDPWGRAVAAVYRDYTARL
+RQANALDFDDLIGMTVHMFEAFPRVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLSGPAD
+DPEGVETPGGELTVVGDSDQSIYAFRGADIRNIVEFEQDFTDAATIKLEQNYRSTQTILD
+AANAVIERNPDRRPKRLWTAEGEGPAIVGYAAENESAEAEWIATTIDRLQDEDGIRPADV
+AVFYRTNAQSRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDDVNVRRI
+LNEPKRGIGDRAEGAVAAWAERNRSTFSAALRDAENAPGMAARSLKAVRGFVQMMDDLGQ
+VAESAGPATVLEAVLEQSGMLAALRESEDLQDESRADNLGELVAVVRSFETTHPDGTLSD
+FLEQVALVADADQLPTAPDVEGEALAEQQGQVTLMTLHTAKGLEFPVVFLTGMEHGVFPH
+ARSMTDEKELAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEIPEALID
+WEREGTTRSAGSLSLTGAGTSRYAGRFGGGRPAWRSRDDDGARPQRLTRGDEPADLTVPS
+AVVRGKAPSRVQPQKEIVALSPGDRVSHATFGEGRVDAVAGAGDKTVATVTFDATGAQKR
+LLLRYAPLTKVEG
+>4_356
+MADLFSALGRTPLNLDRTRRPADPETALPGLVPPAVTRAAADPEAWGEDARPAAPAHTPE
+SLVAGLNPQQAAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAITFTN
+KAAAEMRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYDSADSLRLVT
+TVAKQHELDPKRFAPKALLNRISSLKNELVEADDYAATVAEGDPWGRAVAAVYRDYTARL
+RQANALDFDDLIGMTVHMFEAFPRVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAG
+DPEGVETPGGELTVVGDSDQSIYAFRGADIRNIVEFEQDFTDAVTIKLEQNYRSTQTILD
+AANAVIERNPDRRPKRLWTAEGEGPAIVGYAAENESAEAEWIATTIDRLQDEDGIRPADV
+AVFYRTNAQSRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDDVNVRRI
+LNEPKRGIGDRAEGAIAAWAERNRSTFSAALRDAENAPGMAARSLKAVRGFVQMMDDLGQ
+VAESAGPATVLEAVLEQSGMLAALRESEDLQDESRADNLGELVAVVRSFETSHPDGTLSD
+FLEQVALVADADQLPTAPDVEGEALAEQQGQVTLMTLHTAKGLEFPVVFLTGMEHGVFPH
+ARSMTDEKELAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEIPEALID
+WEREGTTRSAGSLSLTGAGTSRYAGRFGGGRPAWRSRDDDGARPQRLTRGDEPADLTVPS
+GVVRGKAPSRVQPQKEIVALSPGDRVSHATFGEGRVDAVAGAGDKTVATVTFDATGAQKR
+LLLRYAPLTKVEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001745.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001745.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3136b5954518420caaca4268ebd758f8bcc0c3d3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001745.fa
@@ -0,0 +1,40 @@
+>0_2541
+MAAPAEITLPQDLLPADGRFGAGPSKVRSEQLQALQDAAGLLGTSHRQKPVKDLVASVRA
+GVAELFSAPEDYEVILGVGGSTAFWDAAAFGLVRERAQHLSFGEFGSKFAKATDKAPFLG
+ASDIRTAEPGSRPEPEAVAGVDVYAWPHNETSTGVMAPVARPEGIDEDALVVIDATSAAG
+GLDVDVSQADVYYFAPQKNFASDGGLWLALFSPRALARVAEIKESGRWIPDFLDLSTAVD
+NSLKDQTYNTPALATLVMLDAQLRWMNGQGGLAAMAARTADSSSRVYAWAEASSYATPYV
+ARPEDRSGVICTVDFSDDVDAAAVAKALRANGVVDVEPYRKLGRNQLRIATFAAIDPEDV
+SALLRCIDHVVEQLG
+>1_343
+MTSPAEITIPQDLLPADGRFGAGPSKVRPEQLSALQDAAGLLGTSHRQKPVKDLVARVRS
+GVAELFSAPEGYEVILGVGGSTAFWDAAAFSLVRERAQHLSFGEFGSKFAKATDQAPFLA
+PSDIRTSEPGTRPEPEAVAGVDVYAWPHNETSTGVVAPVVRPAGIDEDALVVVDATSAAG
+GLPVDVSEADVYYFAPQKNFASDGGLWLALFSPRALARVAEIKESGRWIPAFLDLATAVE
+NSLKDQTYNTPALATLVMLDAQLRWMNGQGGLDAMTARTADSSSRVYAWAEASSFATPYV
+ARPEDRSAVICTVDFSDDVDAAAVAQVLRANGVVDVEPYRKLGRNQLRIATFAATEPEDV
+AALLRCIDHVVERLG
+>2_2400
+MTDPTAITIPPEMLPQDGRFGAGPSKVRPEQLQALQEAAGLLGTSHRQKPVKDLVASVRA
+GVAELFSVPEGYEVVLGVGGSTAFWDAAAFSLVRSKAQHLSFGEFGSKFARATDNAPFLE
+ASDIRSSEPGTRPQPEAVPGVDVYAWPHNETSTGVSAPVVRPEGIDDDALVVIDATSAAG
+GLDVDVSQADVYYFAPQKNFASDGGLWLALFSPRALARVAEIKESGRWIPEFLDLSIAVD
+NCLKDQTYNTPALATLVMLDAQLRWMNANGGLGFTTGRTADSASRVYAWAEASEHATPYV
+ADPAERSNVICTVDFDDAVDAAAVAQALRANGVVDVEPYRKLGRNQLRIATFAAIDPEDV
+TALLACIDHVVARLG
+>3_68
+MTSPAEITIPQDLLPADGRFGAGPSKVRPEQLSALQDAAGLLGTSHRQKPVKDLVARVRS
+GVAELFSAPEGYEVILGVGGSTAFWDAAAFSLVRERAQHLSFGEFGSKFAKATDQAPFLA
+PSDIRTSEPGTRPEPEAVAGVDVYAWPHNETSTGVMAPVVRPAGIDEDALVVVDATSAAG
+GLPVDVSEADVYYFAPQKNFASDGGLWLALFSPRALARVTEIKESGRWIPAFLDLATAVD
+NSLKDQTYNTPALATLVMLDAQLRWMNGQGGLDAMTARTADSSSRVYAWAEASSFATPFV
+ARPEDRSAVICTVDFSDDVDAAAVAQVLRANGVVDVEPYRKLGRNQLRIATFAAIEPEDV
+AALLRCIDHVVERLA
+>4_350
+MTSPAEITIPQDLLPADGRFGAGPSKVRPEQLSALQDAAGLLGTSHRQKPVKDLVASVRS
+GVAELFSAPEGYEVILGVGGSTAFWDAAAFSLVRERAQHLSFGEFGSKFAKATDQAPFLA
+PSDIRTSEPGTRPEPEAVAGVDVYAWPHNETSTGVMAPVVRPAGIDEDALVVVDATSAAG
+GLPVDVSEADVYYFAPQKNFASDGGLWLALFSPRALARVAEIKESGRWIPAFLDLATAVE
+NSLKDQTYNTPALATLVMLDAQLRWMNGQGGLDAMTARTADSSSRVYAWAEASSFATPFV
+ARSEDRSAVVCTVDFSDDVDAAAVAQALRANGVVDVEPYRKLGRNQLRIATFAAIEPEDV
+AALLRCIDHVVERLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001747.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001747.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5a56c47e9d4c116cd33e4be4a7ec1b6a2179d6c5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001747.fa
@@ -0,0 +1,20 @@
+>0_2543
+MPRRTAAPAPDPADPRRAHGSPGRRRDAGDTDDEEQVPHMPTGRIKFYDSAKGFGFAQTD
+EGEEVHVPSSALPAGVTELRGGARVEFGVAEGRRGKQALSLRVLDAAPSSVRNHRPRPAE
+MAVLMEDLIRWLDETSNGLRRGQYPQSGQAKKMAQVLRRVADDLEA
+>1_341
+MPTGRIKFYDSTKGFGFAQTDEGEEVHVPASALPAGVTELRGGTRVEFGVAEGRRGKQAL
+SLRVLDAAPSVVRNHRPGATEMAVLMEDLITWLDQASNGLRRGRYPQRAQAQKMAQVLRR
+VADDLEA
+>2_2402
+MPTGRIKFYDSAKGFGFAQTDDGEEVHVPAAALPAGVSDLRSGTRVELGVAEGRRGKQAL
+TVEVLDDAPSVVRNHRPSPEKMAVLMEDLIKVLDQTSNGLRRGRYPQRAQAQKIAAVLRR
+VADDLEA
+>3_66
+MPTGRIKFYDSTKGFGFAQTDEGEEVHVPASALPAGVTELRGGTRVEFGVAEGRRGKQAL
+SLRVLDAAPSVVRNHRPGATEMAVLMEDLITWLDQTSNGLRRGRYPQRAQAQKMAQVLRR
+VADDLEA
+>4_348
+MPTGRIKFYDSTKGFGFAQTDEGEEVHVPASALPAGVTELRGGTRVEFGVAEGRRGKQAL
+SLRVLDAAPSVVRNHRPGATEMAVLMEDLITWLDQTSNGLRRGRYPQRAQAQKMAQVLRR
+VADDLEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001748.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001748.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e2ec7cee21842da527c8d82516e4b6fbbac6feb8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001748.fa
@@ -0,0 +1,14 @@
+>0_2544
+MLGVTVTAVSFVALLGLLAAYFFSWPAVPALYALAMFGLPVGFSLMLLHVVLGAVRRSRL
+>1_340
+MTSQDSPTRVAGMPRTSTLPAPAPADHRGGRGVVLVLGVAVTAVSALALVALLVAYFLAW
+PASPALFALALFGLPVGFGLMLLHVVLGAVRRSRP
+>2_2403
+MPSPRTSPQPRPDAAPAPSGARRALRVLLTAGVVLTVVSGLGLLGALAAYFLHATPAFLP
+ALYAVSLFGLPLGFTLMVLHVVLSAVLRARS
+>3_65
+MTSQDSPTRVAGMPRTSTLPASAPAADPADHRGGRGVVLVLGVAVTAVSALALVALLVAY
+FLAWPASPALFALALFGLPVGFGLMLLHVVLGAVRRSRP
+>4_347
+MTSQDSPTRVAGMPRTSTLPASAPAADPADHRGGRGVVLVLGVAVTAVSALALVALLVAY
+FLAWPASPALFALALFGLPVGFGLMLLHVVLGAVRRSRP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001749.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001749.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fdabb82b4ba1c3397df69445291b797bd8ce329a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001749.fa
@@ -0,0 +1,59 @@
+>0_2546
+MSGRLDAAAARARLPRAWLSSAWRGQSLRTKLVMMITVLMLALVAVTAIATAALFRQEAV
+RQLDEDMAANRDTVSMYLANVAQTGEYYMPQLPILRYYGVVWDNDGDRVVQTPVVPGSDE
+PDLPSITPERALEIGSASFEVAGTQDESSRWRVQLYGLSSGDGTMAVALPLEGVRSSVER
+VTSLVVTIGLLGTAGTVIVANLAVQRAFRALNRVERTAAKIAAGDLTQRVESAAPDTEVG
+RLSRSLNAMLAHIESAFRDKEVSEDKMRRFVQDASHELRTPLVTIRGFSELYRHGGLREE
+EDVAAAMQRIESEATRMTRLVEDLLTLARLDEQRPLELAPVDLLILAMDSMMDASVNAPD
+RKVTLVGLDGGRAGSAPIVGDENRMRQVVVNLMANALRYTPAGTPIEIAVGTVDPLGGPG
+AAGDGEGRTSVIEIRDHGLGVSEEDAARIFERFYRADTSRHRETGGTGLGLAIVAAIVAQ
+HGGSVRLLETEGGGATFSVHLPWAPFEDDDDLEDEDDAGPVSESENAAEVSHTGPLGLVA
+PSGAGASVVDAARRSRLLRAGERFRRASAERRPRAGTPAQAPAEGAASPGEEEPGPAAPD
+RP
+>1_338
+MRARLDAAAARVRHPRAWLRGAWQGQSLRTKLVVMIAALMLALVAVTAVATAVLFRQEAV
+RQLDEDMAANRDTVSMYLANVAQTGEYYMPQLPILRFYGVVWDNEGARVVQTPVMPGADE
+PALPDITPAEALERGSASFEVPGTQPDSSGWRVQLYGLSSGDGTMAVALPLQSVTSSVER
+VTSIVVTIGLLATAGTVIVANLAVQRAFRTLNRVERTAAKIAAGDLSQRVESAAPDTEVG
+RLSRSLNAMLAHIESAFRDKEISEDKMRRFVQDASHELRTPLVTIRGFSELYRHGGLREE
+EDVAAAMQRIESEATRMTRLVEDLLTLARLDEQRPLEHAPVDLLILAMDSMMDASVNAPD
+RKVTLVGPDGDRAAPAPILGDENRMRQVVVNLMANALRYTPAGTPIEIAVGTVDHLGGQA
+GADGAGRSSVIEIRDHGPGVSEEDRARIFERFYRADTSRHRETGGTGLGLAIVAAIVAQH
+GGSVRLLETEGGGATFSVHLPWAPFEDEADEDVEDERLPARDTDDDAAGPPTGPLALAAP
+SGAGASAADAARSSRLLRAAERFRRASAERRRRASAPAQAPQADPPSPGEDDPAAERDAR
+P
+>2_2405
+MGPRLGVAAARLRHPRTWLWGWWGARPLRTKLVVMITALMMVLVAVIALVTAVLFRTELL
+RQLDDDLSHNRDEVSIYLTTMSQTGGYYTPQQSILRFYGVVWDTSGRAVVSTPLMPGADG
+PALEGMTPEQVDAQGSASFEVPGTTAGSDGWRVQLYHLRSGEGSLAIALPLHGVRTSVER
+VVTLVVTIGLLGTAVSVVASNLLVERAFRALNRVERTAAKIAAGDLSQRVAYAPPSTEVG
+RLSRSLNAMLAHIETAFRDKEASEDKMRRFVQDASHELRTPLVTIRGFSELYRHGGITRE
+EDVAAAMGRIESEAGRMHRLVEDLLTLARLDEQRPLEHEPVDLLVLGMDSMMDASVNAPD
+RKVSLVGLDGGPAGSAPLMGDENRMRQVVVNLMTNALRYTPEGTPIEIAVGTRDAFGGDS
+GVDGTRHSVIEIRDHGAGVSEEDAARIFERFYRADASRHRETGGTGLGLAIVAAIVAQHG
+GSVRLLETEGGGATFSVHLPWAALEDDADDDLDLEDDDARPGAGVPAGRPPTGGSTAAGS
+AGALETGQRRRLAWAGERFRRASAARRQAQAGTSPAQAARDGA
+>3_63
+MRARLDAAAAHVRHPRAWLRGTWQGQSLRTKLVVMIAALMLALVAVTALATAALFRQEAV
+RQLDEDMAANRDTVSMYLANVAQTGEYYMPQLPILRFYGVVWDNEGARVVQTPVMPGADE
+PALPDITPAEALERGSASFEVPGTQPDSSGWRVQLYGLSSGDGTMAVALPLQSVTSSVER
+VTSIVVTIGLLATAGTVIVANLAVQRAFRTLNRVERTAAKIAAGDLSQRVESAAPDTEVG
+RLSRSLNAMLAHIESAFRDKEISEDKMRRFVQDASHELRTPLVTIRGFSELYRHGGLREE
+EDVAAAMQRIESEATRMTRLVEDLLTLARLDEQRPLEHAPVDLLILAMDSMMDASVNAPD
+RKVTLVGPDGDRAAPAPILGDENRMRQVVVNLMANALRYTPAGTPIEIAVGTVDHLGGQA
+GADGAGRSSVIEIRDHGPGVSEEDRARIFERFYRADTSRHRETGGTGLGLAIVAAIVAQH
+GGSVRLLETEGGGATFSVHLPWAPFEDEADEDVEDERPSARDTDDDAAGPPTGPLAQTAP
+SGAGASAADAARRSRLLRAAERFRRASAERRRRVSAPAQAPQADAPSPGGDDPAAGRDAR
+P
+>4_345
+MRARLDAAAARVRHPRAWLRGAWQGQSLRTKLVVMIAALMLALVAVTAVATAVLFRQEAV
+RQLDEDMAANRDTVSMYLANVAQTGEYYMPQLPILRFYGVVWDNEGARVVQTPVMPGADE
+PALPDITPAEALERGSASFEVPGTQPDSSGWRVQLYGLSSGDGTMAVALPLQSVTSSVER
+VTSIVVTIGLLATAGTVIVANLAVQRAFRTLNRVERTAAKIAAGDLSQRVESAAPDTEVG
+RLSRSLNAMLAHIESAFRDKEISEDKMRRFVQDASHELRTPLVTIRGFSELYRHGGLREE
+EDVAAAMQRIESEATRMTRLVEDLLTLARLDEQRPLEHAPVDLLILAMDSMMDASVNAPD
+RKVTLVGPDGDRAAPAPILGDENRMRQVVVNLMANALRYTPAGTPIEIAVGTVDHLGGQA
+GADGAGRSSVIEIRDHGPGVSEEDRARIFERFYRADTSRHRETGGTGLGLAIVAAIVAQH
+GGSVRLLETEGGGATFSVHLPWAPFEDEADEDVEDERPSARDTDDDAAGPPTGPLAQTAP
+SGAGASAADAARRSRLLRAAERFRRASAERRRRVSAPAQAPQADAPSPGGDDPAAGRDAR
+P
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001759.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001759.fa
new file mode 100644
index 0000000000000000000000000000000000000000..710105359f2fab09ba18a415b16da6c29ac2df4a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001759.fa
@@ -0,0 +1,75 @@
+>0_2566
+MSTSTERPVPSSTYRLQVGPDLPLESVAGLVPYLRRLGVGWLYLSPILEAEPGSDHGYDV
+VDPTRLDAARGGAEGLEAVARAAREAGLGVLVDIVPNHVGVATPEANPAWWDLLAHGSEA
+AHAPWFDVDWTAGEGRVLLPVLGDGPDGEAEAELDRLVVETGDDGGRLRHWDTRYPLAPG
+SLAAAEEETGLRAADVFAGAEPAHEPTPERARLARAVHARQHYRLIGWRRGDAELNYRRF
+FTVTTLAGVRVEDPEVFDAVHAEPARWVREGLVQGLRVDHPDGLADPAGYVRRLRSHVLP
+EGYLVVEKILEPGEELPADWDVDGTTGYDALGEVERVFMHPVAAGGPNEDERRRRDWDEV
+VAEAKRDVATGSLVAETARLVREVRGVHALGAHADEDVAAAFAAVLSRLPVYRTYLPVGL
+AVLERALADAGEAEPALAPVLADLGPELADPDSPVARRFQQTSGMVMAKGVEDRSFYRWT
+RWANLNEVGGDPAHVQLSLDAFHAAQQARQAAWPTAMTTLSTHDTKRGEDVRARIAVLAE
+EPDRWAGELAGLRALHPLGDEGAERLLWESIVGVWPTDGTAPSTERILGFLQKASREAAL
+STTWTDQDPEFEGRLEDLARAVTAPDSPARGAVQAVADRIAEPGLVVQLGHKLVQLAAPG
+VPDVYQGTELPVPSLVDPDNRRPVDFHARADLLDRLDAGHVPGLDDADAAKLAVVAAVLR
+ARRDRPELFTRHRRLDVSGPAAEHAVAFDRGGALAVATRWPVHLAAAGGWGETVVTLPPG
+RWEDAVTGRPVHPDARGAVRLDELLSTLPVALLVPARAEEATP
+>1_326
+MSTSTVRSAPASTYRLQVSPDLPLESVAGLVPYLRRLGVDWLYLSPLLEAEPGSDHGYDV
+VDPTRLDAARGGAEGLDAVARAAHEAGMGVLVDIVPNHVGVATPQANPAWWDVLTHGPEA
+AHAAWFDVDWAAGGGSLLIPVLGDGPDGDADAELNRLVVDEGRLRYWDNVYPLAPGSLEA
+AEAETGLRAAEVFAEADPAKESTAERARLARAVHDRQHYRLVGWRRGDAELNYRRFFTVT
+TLAGVRVDEPEVFDAVHAEPARWVREGLVDGLRVDHPDGLADPAGYARRLRSHVLPEGYL
+VVEKILEPGEALPADWPVDGTTGYDALGEVERVFMHPEAAGDAAEDARRRREWDEAVVRA
+KHDVATGSLAAETARLVREVRAVHALGAHPDEDVAAAFAAVLARLPVYRTYLPVGLAVLE
+GALADAAEAEPALAAVLGDLRPELTDPDSPVARRFQQTSGMVMAKGVEDRSFYRYTRWAN
+LNEVGGDPSHVALSLADFHAAQQARQAAWPTAMTTLSTHDTKRGEDVRARIAVLAEEPDR
+WAAELAELRRLHPLGHPDAERLLWESIVGVWPTDGTAPEEERILGFLQKASREAALATSW
+TDQDPEFEARLAALAAAVTSPEGPARGVLQAVADRIAEPGLVVQLGHKLVQLAAPGVPDV
+YQGTEVPFPTLVDPDNRRPVDFAARADLLDRLDAGHTPGLDDPAAAKLAVVAAVLRTRRD
+RPELFTGHRPLDVSGPAAEHAIAFDRGGALAVATRWPVRLAAAGGWGETVVTVPAGRWED
+AVTGHPVHPDARGAVRLDELLSTLPVALLVPAHAPSDRRERTAP
+>2_2417
+MSHTDAVSAPASTYRLQVGPDLPLDSVAGLVPYLRRLGVDWLYLSPILAADPGSDHGYDV
+VDPARVDPARGGPEALAALAAAAHEAGMRLLVDVVPNHLGVATPLANPAWADLLAHGPEA
+AHAAWFDVDWEAGDGRVLLPVLGDGPEGDPRGAEAGLDQLIVDPSAGEHGVLRHWDTAYP
+LAPGSLAAAEEETGLRAAEVFAGADPAAPTDDAARLGRAVHDRQHYRLVHWRRGDAELNY
+RRFFTVTTLAGLRVEDPEVFDATHVEIGRWVSEGLVHGLRIDHPDGLTDPGAYLRALRER
+VLPEGYLVVEKILEPGEDLPAAWPVDGTTGYDALGELERVFMPADPDGPAADDAARAAWE
+ALIAEAKRDVATGSLAAETARLVREARAAVVLGAHSDEALTEAFADVLASLDVYRTYLPV
+GAERLAAAVARARAAHPEPADVLDDVARVLADPDSPVARRFQQTSGMVMAKGVEDRSFYR
+WTRWANLNEVGGDPAHLDLPLAGFHALQRARQASWPTTMTALTTHDTKRSEDVRARITAL
+AEEPASWEDALARLRTAHPLDAPGLEELVWESIVGVWPTDGTAPEADRLEEFLLKSAREG
+QEHTSWTAQDDAYEGRLRALAADVVAPDSAARAVVQEIADRIAEPGLTVQLGRKLVQLAA
+PGVPDVYQGTEIPFPTLVDPDNRRAVDFEARADLLDRLDAGHAPTLDEPEAAKLLVVSRA
+LRARRDRPELFHGYRPLDVDGPAAAHLIAFSRGGALALATRLPLTLAAAGGWRETVVSLP
+PGRWRCAVTGRAVTPDARGAVRVDDVLSQLPVALLLPEEETA
+>3_51
+MSTSTVRSAPASTYRLQVSPDLPLESVAGLVPYLRRLGVDWLYLSPLLEAEPGSDHGYDV
+VDPTRLDAARGGAEGLDMVARAAHEAGMGVLVDIVPNHVGVATPRANPAWWDVLTHGPEA
+AHAAWFDVDWAAGGGSLLIPVLGDGPDGDADAELNRLVVDEGRLRYWDNVYPLAPGSLEA
+AEAETGLRAAEVFAEADPASEPTAEQARLARAVHERQHYRLVGWRRGDAELNYRRFFTVT
+TLAGVRVDEPEVFDAVHAEPARWVREGLVDGLRVDHPDGLADPAGYARRLRSHVLPEGYL
+VVEKILEPGEALPADWPVDGTTGYDALGEVERVFMHPEAAGDAAEDARRRREWDEAVVRA
+KHDVATGSLAAETARLVREVRAVHALGAHPDEDVAAAFAAVLARLPVYRTYLPVGLAVLE
+GALADAAAAEPGLADVLGDLRPELTDPDSPVARRFQQTSGMVMAKGVEDRSFYRYTRWAN
+LNEVGGDPSHVALSLADFHSAQQARQAAWPTAMTTLSTHDTKRGEDVRARIAVLAEEPDR
+WAAELAELRRLHPLGHPDAERLLWESIVGVWPTDGTAPEEERILGFLQKASREAALATSW
+TEQDPEFEARLAALAAAVTSPEGPARGVLQAVADRLAEPGLVVQLGHKLVQLAAPGVPDV
+YQGTEVPFPTLVDPDNRRPVDFAARADLLDRLDAGHTPGLDDPAAAKLAVVAAVLRARRD
+RPELFTGHRPLDVSGPAAEHAIAFDRGGALAVATRWPVRLAAAGGWGETVVTVPAGRWED
+AVTGHPVHPDARGAVRLDELLSTLPVALLVPAHAPSDRRERTAP
+>4_333
+MSTSTVRSAPASTYRLQVSPDLPLESVAGLVPYLRRLGVDWLYLSPLLEAEPGSDHGYDV
+VDPTRLDAARGGAEGLDMVARAAHEAGMGVLVDIVPNHVGVATPPANPAWWDVLTHGPEA
+AHAAWFDVDWAAGDGSLLIPVLGDGPDGNADAELDRLVVDAEGGRLRYWDNVYPLAPGSL
+EAAETETGLRAAEVFAAADSAKEPTAEQARLARAVHDRQHYRLVGWRRGDAELNYRRFFT
+VTTLAGVRVEEPEVFDAVHAEPARWVREGLVDGLRVDHPDGLADPAGYARRLRSHVLPEG
+YLVVEKILEPGETLPADWPVDGTTGYDALGEVERVFMHPEAAGDAAEDARRRREWDEAVV
+RAKHDVATGPLAAETARLVREVRAVHALGAHPDEDVAAAFAAVLARLPVYRTYLPVGLAV
+LEGALADAAEAEPGLADVLGDLRPELTDPDSPVARRFQQTSGMVMAKGVEDRSFYRYTRW
+ANLNEVGGDPSHVALSLADFHAAQQARQAAWPTAMTTLSTHDTKRGEDVRARIAVLAEEP
+DRWAAELAELRRLHPLGHPDAERLLWESIVGVWPTDGTTPEEERILGFLQKASREAALAT
+TWTDQDPEFEARLAALAAAVTSPEGPARGVLQAVADRIAEPGLVVQLGHKLVQLAAPGVP
+DVYQGTEVPFPTLVDPDNRRPVDFAARADLLDRLDAGHTPGLDDPAAAKLAVVAGVLRAR
+RDRPELFTGHRPLDVSGPAAEHAIAFDRGGALAVATRWPVRLAAAGGWGQTVVTVPAGRW
+EDAVTGHPVHPDARGAVRLDELLSTLPVALLVPAHAPSDRRERTAP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001762.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001762.fa
new file mode 100644
index 0000000000000000000000000000000000000000..dc6da525ad27ff88b331fd8996c357b1a000b0be
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001762.fa
@@ -0,0 +1,30 @@
+>0_2569
+MKLATFRQPDSDAAYPGATFAAVITSVHPEDPEVAVRAVALPECRDVGEYLTAEPQEQRE
+MVESALRAAQEDRSLLLDTSTLVYDTLIPFPTKVFCVGLNYTNHIEETGQNQPEHPTLFA
+KFTQSLTGALDPVEVPEEDHLVDYEGELCIVIGEPGRRIAVEDAKEHIAGYAVANDVSMR
+GWQGRTSEWLQGKVWEASTPVGPWLVTPDELTADARIITRVNGVERQDDRIADVVFSPEE
+LVAYVSQMITLNPGDLIMTGTPAGVAVARKGADGRRPWLQAGDVVEVEITGLGRQRNELV
+>1_323
+MKLATFRQPDSDAAYPGATFAAVITSVHPEDPEVAVRAVALPDCRDVGEYLTATPEEQRE
+MVEGALRAAQADRSLLLDTSGLVYDTLVPFPTKVFCVGLNYTNHIDETGLERPEHPTLFA
+KFPQSLTGALDPIEVPEEDHRVDYEGELCIVVGEPGRRIAVEDAPEHIAGYAVANDISMR
+GFQGRTSEWLQGKVWEASTPVGPWLVTPDEFPADARVLTHVNGELRQEDRVADVVFSPAE
+LVSYASQLITLNPGDLILTGTPAGVALARRDAEGRRPWLRPDDVVEVEITGLGRQRNELV
+>2_2420
+MKLATFRQPDSDASYPGATFAAVLTSFHPQDPQVAVRAVALPECRDVGEFLTAEPQEQKD
+MVREALEAAKEDHGLLLDVSTLVYDTLVPFPTKVFCVGLNYADHIRETGQEKPEHPTLFA
+KFAQSLTGALDPIEVPEEDHRVDYEGELCVVIGEPGRRIAVEDAKDHIAGYAVANDVSMR
+GFQGRTPEWLQGKVWEASTPVGPWLVTADEFPKDARIVTRVNGEVRQDGKVKDVVFSPAE
+LVSYVSQLVTLNPGDLIMTGTPAGVAVARRDGDGRRPWLRADDVVEVEITGLGRQRNELV
+>3_48
+MKLATFRQPDSDAAYPGATFAAVITSVHPEDPEVAVRAVALPDCRDVGEYLTATPEERRE
+MVEGALRAAQADRSLLLDTSGLVYDTLVPFPTKVFCVGLNYTNHIDETGLERPEHPTLFA
+KFAQSLTGALDPIEVPEEDHRVDYEGELCIVVGEPGRRIAVEDAPEHIAGYAVANDISMR
+GFQGRTSEWLQGKVWEASTPVGPWLVTPDEFSADARVLTHVNGELRQEDRVADVVFSPAE
+LVSYASQLVTLNPGDLILTGTPAGVALARRDAEGRRPWLRPDDVVEVEITGLGRQRNELV
+>4_330
+MKLATFRQPDSDAAYPGATFAAVITSVHPEDPEVAVRAVALPDCRDVGEYLTATPEEQRE
+MVEGALRAAQADRSLLLDTSGLVYDTLVPFPTKVFCVGLNYTNHIDETGLERPEHPTLFA
+KFPQSLTGALDPIEVPEEDHRVDYEGELCIVVGEPGRRIAVADAPEHIAGYAVANDISMR
+GFQGRTSEWLQGKVWEASTPVGPWLVTPDEFPADARVLTHVNGELRQEDRVADVVFSPAE
+LVSYASQLITLNPGDLILTGTPAGVALACRDAEGRRPWLRPDDVVEVEITGLGRQRNELV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001764.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001764.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2c3462094b8137b7d9c8e3e9021f723608f6318f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001764.fa
@@ -0,0 +1,48 @@
+>0_2614
+MDEAGVVDPERLRRGLAEVEFREPTRVAVVTERGPDLSGLDDDRAAQAFNGRVLERARAE
+HPDWLSADGQTWADGLVIVALDPDNRMLGLYVGEDRSLSTDQLQDVREDGYEAARAAKWT
+DALVDVTDSAAELIGRPWWQHPGLWVGAGAVGLVGAGTGAAVMADRRKKQARTQADLESA
+RGHLTAVTLELDATEVNASTVPTDSPHAATLLERFRGFRERTLDATAEQQRLEAVPEKDL
+HRRKHREAAAALRAQTAELDGLDDAIGAANALLNRHPGWPAAWDLQTAPLREDLDAVAEL
+RDAVTDTPSVQAAVAALESFRAEASGRLDALGGDLEAERVTPAAALDELDGLRGRLTSLV
+GSVAEAEITAFSDDDEERRILREKLRSRRGTHRAARGSILDCTLPSDAYWTVVAFNAGHR
+AGERSVQERREAASSPSSSGTGYGSSGGSFSGTGSSGRF
+>1_321
+MAAAPQAHAVAWDRVELVDDAGVIDPAQLRRDLAGIEFREPTRVAVVTERGPDLSALDDD
+RASQAFNGRVLERARAEHPDWLSADGQKWADGLVIVALDPDNRLIGVYVGEDRMLSTDQL
+RDVREAGHEAARAARWTDTVVEVTDAAAELIGRPWWQAPELWFGAGIVGVAGGGAAAAVL
+ASRRRRRRRTADLLTEARTHLTSVTLEMDATEVNASTVPEDSPHAAALMERFRGFRRQAL
+DASAELDRLEALPERSLHRTEHARAAEDVRDRARELDRLDDAVAAANTFLNRHPGWPSAW
+DQQTAPLRADLDAVGTLASSVGSAGPVRSAVAALESFRAEAQGRLEALGADLQDERLTPA
+AALDELDALRRRLTGLVSALADAEVAAFGKDEAERELLRDELRTHRGPARSARGSILDSA
+LPTDAYWTVVAFTTGHQAGERSVQDHRQAQSSSSGTGYGSSAGSFSGAGSSGRF
+>2_2425
+MPEPTAPRPSRLARAPRARLLARAARPLAAAAVAGAALAGAAAPAGVAATAAAVPVAAGA
+VVAAPAAHALEWSRVDLADQAGIIDPAQLERDLAGIEFRAPTRVAVFTERGPDIRGLDEE
+RKAQAFNGRVLEFARAQRPGWISADGQKWADGLVIVAVDPDNRMLGVYQGEDRKLESGGQ
+SAVREAGTDAARDARWTDAVVDMVDEAATRIGRPWNEDPVVWLGLGGGALGVLGAGAGIT
+AAVVGPRRSRARRSAEHLEEARHHLTSVTLDWETTELNASTVPLGSRHGARLMERYRGFH
+RSALDATARLEELEAAPVKDRSAQSFVDRAGGVRDDVAALDALDDAIADANALLNRLPGW
+EDAWDRQVAPLREDLHRVPALHDRLGDVDGTAVPLAALDSFRDEARTELERLGTGLTAQT
+VAPDDAIDALERLRRRLTVRIEELARAVAQAQDGRKKQRLMQESLDGQRAVPRDRRGSIL
+DAGDGWRTYWTVTAFDAGVDAGDSAVASYESSSSGTGYGSSGGSFSGSGSSGSF
+>3_46
+MTRPTHRTARRTLAAVALSAAALTGPAAAATVVALPVTAGVTGAVVATAPQAHAVAWDQV
+ELVDDAGVIDPAQLRRDLAGIEFREPTRVAVVTERGPDLSALDDDRASQAFNGRVLERAR
+AEHPDWISADGQKWADGLVIVALDPDNRLIGVYVGEDRTLSTDRLREVREAGHEAARAAR
+WTDTVVDVTDAAAELIGRPWWQAPELWFGAGIVGVAGGGAAAAALASRRRRRRRTADLLA
+EARTHLTSVTLEMDATEVNASTVPEDSPHAAALMERFRTFRRQALDASAELDRLEALPER
+SLHRTEHARAAEDVRDRARELDRLDDAVAAANTFFNRHPGWPAAWDQQTAPLRADLDAVG
+TLASSVGSAGAVRSAVAALESFRTEAQDRLEALGADLQDERLTPAAALDELDALRRRLTG
+LVSALADAEVAAFGKDEAERELLRDELRTHRGPVRSARGSILDSALPADAYWTVVAFTTG
+RQAGERSVQDHRQAQSSSSGTGYGSSGGSFSGAGSSGRF
+>4_328
+MTRPTHRIARRTLTAVALSAAALTGPAASATVVALPVTAGVTGAVVAAAPQAHAVAWDQV
+ELVDDAGVIDPAQLRRDLAGIEFREPTRVAVVTERGPDLSALDDDRASQAFNGRVLERAR
+AEHPDWLSADGQKWADGLVIVALDPDNRLIGVYVGEDRMLSTDRLREVREAGHEAARAAR
+WTDTVVDVTDAAAELIGRPWWQAPELWFGAGIVGVAGGGAAAAALASRRRRRRRTADLLA
+EARTHLTSVTLEMDATEVNASTVPEDSPHAAALMERFRNFRRQTLDASAELDRLEALPER
+SLHRTEHARAAEDVRDRARELDRLDDAVAAANTFLNRHPGWPAAWDQQTAPLRADLDAVG
+TLASSVGSAGPVRSAVAALESFRTEAQDRLEALGADLQDERLTPAAALDELDALRRRLTG
+LVSALADAEVAAFGEDEAERELLRDELRSHRGPARSARGSILDSALPADAYWTVVAFTTG
+HQAGERSVQDHRQAQSSSSGTGYGSSGGSFSGAGSSGRF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001765.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001765.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c97fb61c038082d361b21a7900813237a7fe7db0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001765.fa
@@ -0,0 +1,20 @@
+>0_2615
+MSAAENPATRKDPLAFYLDKAVPDAWKAVGGLAAAVRTAAEEAGLDRQLVELVNLRVSQI
+NGCGFCLDLHAREGAKAGLNAQRMALLPAWREAEAVYSEQERAALELAEAVTELPEQEQL
+HYVQASTAAALTDAQYAAVQWAAMVMNLTNRISILSHHPVRRRED
+>1_320
+MTAADTPAPRQDPLAFFLDKAVPEAWHAVGPLASAARGAAEQAGLDRQLVELVNLRVSQL
+NGCVFCLDRHTRQGADAGLSVQRLGLLPAWREAGAVYSEQERAALELAEAVTDLPEQEQL
+NYVQASTAAVLTDAQYAAVQWVAIVMNLTNRISILSHHPVRRRDG
+>2_2426
+MSSPHDDAAPARKDPLAFYLDKAVPEAWVAVGGLAAAARRAAVEAGLDEQLMELVNLRVS
+AINGCAYCLDVHTRKGVGAGLSDQRRGLLSAWREAPEVYTELERAALELAEAVTELPEQE
+QQQYVQLSTHGVLTDAQYAAVQWLAIVMNVTNRISILSHHPVRRHDS
+>3_45
+MTAADTPAPRQDPLAFFLDKAVPEAWHAVGPLASAARAAAEQAGLDRQLVELVNLRVSQL
+NGCGFCLDRHTRQGADAGLSVQRLGLLPAWREAGAVYSEQERAALELAEAVTDLPEQEQL
+NYVQASTAAVLTDAQYAAVQWVAMVMNLTNRISILSHHPVRRRDD
+>4_327
+MTAADTPAPRQDPLAFYLDKAVPEAWHAVGPLASAARDAAEQAGLDRQLVELVNLRVSQL
+NGCVFCLDRHTRQGADAGLSVQRLGLLPAWREAGAVYSEQERAALELAEAVTDLPEQEQL
+NYVQASTAAVLTDAQYAAVQWVAIVMNLTNRISILSHHPVRRRDG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001766.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001766.fa
new file mode 100644
index 0000000000000000000000000000000000000000..19fb9dfffb741e9a6cc0c947549b3fe511c1ccb0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001766.fa
@@ -0,0 +1,17 @@
+>0_2617
+MTENTPTLDAPQVRKVGEKYEIVVDGDGTVAGYTLAIDYEGTDGVAQRIFPHTKMAEEYG
+GRGLASVLVREALKDSVAAGFRIVPVCPYVKQWTQKHDDVAGDVDQARPEHLQFLEEHAR
+RRSEG
+>1_319
+MTEQTPSLEHPQVRKNAERYEIVVDEAGTVAGYTVAIDYDTGDGPTQRIFPHTKVDHGYE
+GRGLASTLVREALKDTVAAGRRIVPVCPYVKDWVNEHDDVAGEVDPAGPEHLQFLESRQD
+>2_2428
+MTEQTSSLDHPQVRKNAEKYEIVVDADGTVAGYTLAIDYTAEDGTAEDGTEQRIFPHTKL
+EDAYEGKGLASTLVREALRDTEAAGRRIVPVCPYVKQWADKHADEVEGQVDQPRPEHLQF
+LEKHAQERKQG
+>3_44
+MTEQTPSLEHPQVRKNAERYEIVVDDAGTVAGFTVAIDDDTADGPAQRIFPHTKVDHQYE
+GRGLASTLVREALKDTVAAGRRIVPVCPYVKDWVDEHDDVAGEVDPARPEHMQFLESRQD
+>4_326
+MTEQTPSLEHPQVRKNGERYEIVVDDAGTVAGFTVAIDDDTADGPAQRIFPHTKVDHEYE
+GRGLASNLVREALKDTVAAGRRIVPVCPYVKDWVDEHDDVAGEVDPARAEHLQFLESRQD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001772.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001772.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8d9ed1674492c123bec1be202b3d12e81077bd80
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001772.fa
@@ -0,0 +1,28 @@
+>0_4
+MKHRSLTLTAALAVTALGLTACGDSGDAGAGGDEKYTVGINQLVSHPALDGAREGFKEAF
+SDAGLEVTFEEQNAQGEQATVTSIASTFANDGDVDLVAAIATPAAQGTAAAVKDKPVVFM
+AVTDPKGAELVASEEAPGGNVTGVSDRNPVQEQLQLLKDVNPDAKTVGIVYNSGEANSAV
+QVEQAKEAGQELGLEIKEATVTNSSEVQQGVQSLSDVDGIYVPTDNAVVSALETVVGFGE
+ENDIPVISADIDSVDRGALGTYGIDYKAHGKQAGEMAVKILKDGANPGEIAVGFADPANL
+QLVLNPAAAEAYGVEIPAELSDEADRLVEG
+>1_313
+MKHRSLPLTAALAVAALGLTACGDSGSGGSGSSSAAGGDGSYTVGINQLVSHPALDGAAE
+GFKEAFKDAGLDVTFEEQNAQGEQATVTSIASTFANDGDVDLVAAIATPAAQGTASAVKD
+KPVVFMAVTDPQGAELVASDEAPGGNVTGVSDRNPVKEQLQLLKDVKPDATTVGIVYNSG
+EANSKVQVDQAKEAGKELGLEVKEATITNSSEVQQGVQSLSGVDGIYVPTDNAVVSALET
+VVGYGEEQRVPVISADIDSVERGALGTYGIDYTAHGKQAGEMAVKILKDGAKPAELPVGY
+ADPANLQLVLNPKAAEAYGVEIPAELTDRADQLVEG
+>3_38
+MKHRSLPLTAALAVAALGLTACGDSGSGGSGSSSAAGGDGSYTVGINQLVSHPALDGAAE
+GFKEAFKDAGLDVTFEEQNAQGEQATVTSIASTFANDGDVDLVAAIATPAAQGTASAVKD
+KPVVFMAVTDPQGAELVASDEAPGGNVTGVSDRNPVKEQLQLLKDVKPDATTVGIVYNSG
+EANSKVQVDQAKEAGKELGLEVKEATITNSSEVQQGVQSLSGVDGIYVPTDNAVVSALET
+VVGYGEEQRVPVISADIDSVERGALGTYGIDYTAHGKQAGEMAVKILKDGAKPAELPVGY
+ADPANLQLVLNPKAAEAYGVEIPAELTDRADQLVEG
+>4_320
+MKHRSLPLTAALAVAALGLTACGDSGSGGSGSSSAAGGDGSYTVGINQLVSHPALDGAAE
+GFKEAFEDAGLDVTFEEQNAQGEQATVTSIASTFANDADVDLVAAIATPAAQGTASAVKD
+KPVVFMAVTDPKGAELVASDEAPGGNVTGVSDRNPVKEQLQLLKDVKPDATTVGIVYNSG
+EANSKVQVDQAKEAGKELGLEVKEATITNSSEVQQGVQSLSGVDGIYVPTDNAVVSALET
+VVGYGKEQRVPVISADIDSVERGALGTYGIDYTAHGKQAGEMAVKILKDGAKPAELPVGY
+ADPANLQLVLNPKAAEAYGVEIPAELTDRADQLVEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001780.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001780.fa
new file mode 100644
index 0000000000000000000000000000000000000000..75ae776f84c0ac6fd4d6fafeb2596b8910317fa4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001780.fa
@@ -0,0 +1,31 @@
+>0_118
+MFPITDDQEALVDAVRDFAQQRVAPHALEWDAEKHFPVDVLAEAGELGLGGIYVGEEHGG
+TGLERKDAILIFEELSKADPAFAAYISIHNMVAWMIDSYGNDEQRAQWIPELMSMEHLAS
+YCLTEPGAGSDAAALKTRAVRDGDDYVLNGVKQFISGAGSSDYYVVMCRTADTGAKGISA
+VVVHKDTPGLSFGPNEKKMGWHTQPTRQVIFEDVRVPVANRLGEEGDGFRIAMKGLNGGR
+LNIGACSIGGGLAALDKATRYLKERSAFGEPLTTKQALVFELADMAVKLETAHTLLMRAA
+DALDRNDPDTVRLCAMAKLVATESGYEAADAALQLHGGYGYLHEYGVEKLVRDLRVHRIL
+EGSNEIMRMIVGRGLIGG
+>1_234
+MDVLAEAGELGLGGIYVGEEHGGTGLARTDAILIFEELAKADPAFAAYISIHNMVAWMID
+SFGSDEQRARWIPDLVGMEHLASYCLTEPGAGSDAAALKTRAVRDGDHYVLNGVKQFISG
+AGSSGYYVVMCRTADTGARGISAVVVHKDTPGLSFGPSEKKMGWHTQPTRQVIFEDVRVP
+VADRLGEEGDGFRIAMKGLNGGRLNIGACSIGGGLAALDKATRYLKERSAFGEPLTTKQA
+LVFELADMSVKLETAHTMLMRAADALDRNDPDTVRLCAMAKLVATESGYEAADTALQLHG
+GYGYLHEYGVEKLVRDLRVHRILEGSNEIMRMIVGRGLIG
+>3_2197
+MFPITDDQKALVDAVRDFAEQRVAPHALDWDAEKHFPVDVLAEAGELGLGGIYVGEEHGG
+TGLERTDAILIFEELAKADPAFAAYISIHNMVAWMIDSFGSDEQRARWIPDLAGMEYLAS
+YCLTEPGAGSDAAALKTRAVRDGDHYVLNGVKQFISGAGASDCYVVMCRTADTGARGISA
+VVVHKDTPGLSFGPNEKKMGWHTQPTRQVIFEDVRVPVADRLGEEGDGFRIAMKGLNGGR
+LNISACSIGGGLAALDKATRYLKERSAFGEPLTTKQALVFELAEMAVKLETAHTMLMRAA
+DALDRNDPDTVRLCAMAKLVATEHGYEAADTALQLHGGYGYLHEYGVEKLVRDLRVHRIL
+EGSNEIMRMIVGRGLIG
+>4_234
+MFPITDDQKALVDAVRDFTEQRVAPHALDWDAEKHFPVDVLAEAGELGLGGIYVGEEHGG
+TGLERTDAILIFEELAKADPAFAAYISIHNMVAWMIDSFGSDEQRARWIPDLAGMEHLAS
+YCLTEPGAGSDAAALKTRAVRDGDHYVLNGVKQFISGAGASDCYVVMCRTADTGARGISA
+VVVHKDTPGLSFGPNEKKMGWHTQPTRQVIFEDVRVPVAGRLGEEGDGFRIAMKGLNGGR
+LNIGACSIGGGLAALDKATRYLKERSAFGEPLTTKQALVFELADMSVKLETAHTMLMRAA
+DALDRNDPDTVRLCAMAKLVATEHGYEAADTALQLHGGYGYLHEYGVEKLVRDLRVHRIL
+EGSNEIMRMIVGRGLIG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001781.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001781.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5ba2b82844d1c02e6b7cb6541a38258fd8ef2f8b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001781.fa
@@ -0,0 +1,25 @@
+>0_133
+MEPLNLSSPGLSPAVWRVTTVSRVEIRHLRSFVAVAEERHFGRAAERLHIAQPPLSQQIK
+QLEAALGVTLLERTTRRVDLTDAGRLLLDRSRQLLTDLASLEHDVREVGRGAAGILRVGF
+VGSATYRLMPAIVRAARDAMPGVRLQITGEKITPALEDALLENRLDVAVLRPPVRAAELT
+LTPVEAGRLLLAVPAGHRLAAEDGPVALADLVDEEFVSYPRDSALTAIVQEAARRVGFRP
+RLVQRAGETSTVMAFVAAGLGVAVVPDDVRRPGAVSGVAFRPLSDMPDVELAVAAKADAR
+SPLVPAFVELACRTAAALAEAGEDPTPDPDRPAQET
+>0_789
+MDVHQAKAFLAVAEELHFGRAAGRLQIAQPALSRTVKQLERSLGTDLFVRSTRRVELTAA
+GLALLEPARTLVQASQTAREAVQSALAGETGTVRLGFAGASTHGVVGQLARSVRRRRPGL
+TLEIHSSQFSHLGLERVLEGSLDVAIGRWDFIPHELASRVIAHEEAIVALPADHPHAQET
+GPIDVGLLRDEPWVTLPSGLGSALANRLTTLATSAGFAPRVVQQAPDSFTQMVLVAAGLG
+CAVTLDSVRDNSATPGVVYRPVAGDNPPLEVRMLWRSLDASPALRAVLDLAPAAEPAGVA
+PARTDAAD
+>1_1976
+MVGITLRHMEYLVAVIDEGSMTAAAARLHVTQATVSMALAECERRLGVPLLVRQPAKGVA
+ATLAGHRMAVQARRILGLVHEMEASVPAMPGELAGDLEVGCVPSLSPQAVPVLAEHFSRR
+HPRVTLHYREGAATDLQREVLQGRLEMAVMFSRQQAPGLRSIEVARAQLKVMLPEGHRLA
+AAHEVAFADVAQEPAILIDLPPSTERSLEFMRAAGVEPTLRWSSNNLATVASLVGAGLGW
+SLRYTLPGEQPAARGLVEIPVADPTPPNAVCAVVPDGDRVDQRVRHALEVLRRVLSEEEG
+RPDVDCA
+>2_95
+MEIRHLRSFVAVAEERHFGRAAERLHIAQPPLSQQIKQLEAELGVRLLDRTTRRVDLTEA
+GRLMLERTRSLLADLASLEHDDDIASAVKPELLLDVQQGADGNSTVYDFVLDPVSEKTHP
+TAIRD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001784.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001784.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bc3dfe057ae68e2b3f011892124531cb1a5e6522
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001784.fa
@@ -0,0 +1,25 @@
+>0_179
+MKSSLLTATGLPRAAAVLAAAGLLLTGCAADPTLDENWPEIRQKVVDAQSLRLQMDGEAA
+PDAEGSGQDSEITAAAADLSGATDDSHLKGTMDMDMGADSVDMEILRLGEEVFLKMAADG
+DGVPAEMAMFEQLVGDRWMLMPADEADSMAGISLKEIMDDLEADMPAAEAFDGKDLKAEK
+VELDGQEYLKYALPEEFHDFARTMYVHPDDETLHRLEGTGGEDAEADTTATFSEWNAVQA
+PERPAEDQIVDMAALQGLTG
+>1_192
+MKTPARLAVGMLAASGLLLTGCASDPTLDESWPEIRQKVVDAESLRLRVEGTAADKEEEK
+DDASASAAPSASLGTDASQSLNVDLAGATDDSHLKGTMNMDMGAATMDIEVLRRDADVFF
+KLKADGDDLPQEMGMFSTLVGDRWIKTSADQAAQMDISLQEIMSDLEEDMPAADAFDGKD
+LKAEEVELEGRTYLKYALPEEHHEFGRTMLIDPESTTLYRLEDVNSEDEDVDANATFTEW
+NAVEAPEAPAKEDVFDLAELQELAG
+>2_115
+MTPRLSRASLTALLGAGALALSACGGDPAPAASSSAEAASSSAAGPTVSTSPNGSDAAAS
+SSSESAASESSASDVPAGQAPEAEVVWKDIQQGLDEAESVHILAEIDGGSGSEVQRVDLA
+GDVAGTTVQGSVTGDSADFTGTMDFIHVGGQTYLKMDGSGGGDASRMAEALDGRWLVDTQ
+GMIPVDEMNPQVFLDEMKQEFSTVTDAELAAMEGEVVQVDGEEMYRYSDDSSWTMTVDKD
+NHVREFRDTKSSGEGTVTMDRWNQVTPAAAPPAAEQVTMDELSQEIASSGAGSSAGATAS
+ATVDG
+>2_135
+MKSPKIAAAALLATGGLLLSACATQPTLEESWPEVRQKVVDAQSLHLKMDGTAKEDASGS
+ASASSSSDIQSGTIDLAGATDDSHLKGTVAAKMGDGEVNMDILRLGQDVYMRINKAEGGQ
+APEGMDAFQQIVGDRWMLMPADQASGMGELSLGTVMDDLEEDMPAADAFNGKDVKAEEVD
+LDGRKVLKYALPEEHKDFGRTMYVDKETKELYRLEDVNSVESEADATATFTEWNAVQAPE
+RPAEDEVFDMQKLSEGLAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001789.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001789.fa
new file mode 100644
index 0000000000000000000000000000000000000000..25ed9374212a9396d9f059965f0cc2c2e44d0b75
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001789.fa
@@ -0,0 +1,34 @@
+>0_220
+MPAPPPPAASPPHADGRATSDGNAFSRAMRPVNTVMERFIPSSLMFSILLTAIVAVLALI
+LTPTAPVDVLMGWGNGLSGLLAFMTQMALILLLGHILANTGPVRALLTALARVPRSAVQA
+YSFVFVVAALASLVTWGLGLVVGGLLAREVAAQGRERGLRLHFPLLVAAGFSGFVVWHMG
+YSASGPLTAATPGSFLEDSLGGRTVPISDTVFTWWNLTAAAVAIVAVTLVLYLIAPRGDD
+RIHELDVDARERAVVTEPELETPADRLDASRIPTLLVGLALAAFLVVHFVQGGTLTLDIV
+NWSFLALIFLLVRSAQELIQLTAHAASNVGEILLQFPLYAGILGMMTASGLIQIFSDALV
+AVANPTTFGLLAFLAAGLVNFFVPSGGGQFAVQGPIMLSAGAELGVDPAITIMAVSYGDQ
+WTNMIQPFWALPLLAIAGLRMRDILGYTTVVLLVTGVVFAGTMLLVSL
+>1_145
+MGWGDGLSGLLAFITQMALVLMLGHILANTGPVRRLLARLASIPRTPLAAYIFVFVVAAA
+ASLITWGLGLVVGALLAKEVAAQARERGLVLHFPMLVAAGFSGFVVWHMGYSGSGPLTAA
+TPGSFLTESLDGRTVPVSETTFSWWNITAAVVTVLVVALALFLVAPRAGDRIVELEIDAR
+DQDAVPAPEIETPADRLDASRVPTLLVGAMLVVYLVMHFVGGGTLTLDIVNWSFLALILL
+LVRSPHELIGLTQSAASNVGEILLQFPLYAGILGMMTTTGLVAVLSDAFVAISNPVTFGL
+LAFLAAGLVNFFVPSGGGQFAVQGPIMLQAGDALGVDPAITIMAVSYGDQWTNMIQPFWA
+IPLLAIAGLKMRDILGYTTVVLLASGLVFGGTLLLVSL
+>3_2110
+MGWGDGLSGLLAFITQMALVLMLGHILANTGPVRRLLARLASIPRTPLAAYIFVFVVAAA
+ASLITWGLGLVVGALLAKEVAAQARERGLVLHFPMLVAAGFSGFVVWHMGYSGSGPLTAA
+TPGSFLTESLGGRTVPVSETTFSWWNITAAVVTVLVVALALFLVAPRAGDRIVELEIDAR
+DQDAVSAPEIETPADRLDASRVPTLLVGAMLVIYLVMHFVGGGTLTLDIVNWSFLALILL
+LVRSPHELIGLTQSAASNVGEILLQFPLYAGILGMMTSTGLVAVLSDAFVAISNPVTFGL
+LAFLAAGLVNFFVPSGGGQFAVQGPIMLQAGDALGVDPAITIMAVSYGDQWTNMIQPFWA
+IPLLAIAGLKMRDILGYTTVVLLASGLVFGGTLLLVSL
+>4_153
+MSATSTRPPTPRPPGRAAREGTFFSRAMRPLNTTMERFIPSSLVFTIVLTFAVAALCLLL
+TPAGPADVVVGWGDGLSGLLAFITQMALVLMLGHILANTGPVRRLLARLASIPRTPLAAY
+IFVFVVAAAASLITWGLGLVVGALLAKEVAAQARECGLVLHFPMLVAAGFSGFVVWHMGY
+SGSGPLTVATPGSFLTESLDGRTVPVSETTFSWWNITAAVVTVLVVALALFLVAPRAGDR
+IVELEIDARDQDAVSAPEIETPADRLDASRVPTLLVGAMLVVYLVMHFVGGGTLTLDIVN
+WSFLALILLLVRSPHELIGLTQSAASNVGEILLQFPLYAGILGMMTTTGLVAVLSDAFVA
+ISNPVTFGLLAFLAAGLVNFFVPSGGGQFAVQGPIMLQAGDALGVDPAITIMAVSYGDQW
+TNMIQPFWAIPLLAIAGLKMRDILGYTTVVLLASGLVFGGTLLLVSL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001790.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001790.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9e7b14c156a263e1a1410bab37a5f77a730bdf1a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001790.fa
@@ -0,0 +1,36 @@
+>0_229
+MSRRRRVRPLSTAAALAVVAGLCAPGALAQDPVPAPDAPEVRSAVEDLSRPASPAEERSW
+DAARAELAEDTAGDAFYRPPATIPARPGTLIRSEPSAFYLDPVKLIRVPARATRILYSSV
+DAQGRPMAVSGTVLTPTAPWTGGGERPVIGYAVGTQGAADRCAPSRTLSTGEQYEGVGIS
+SLLGRGHTVVVTDYEGLGTPGAHTYMVRESQAHAVLDSVRAAAQVDGAEVTASSPVALAG
+YSQGGGASAAAAELAPSYAPELDLKGAYAGAPPADLVQVADRIDGGSYSAFLLYAMSGQL
+AAYDVDPAVYLNEHGRQVLTDAVETCVTDSGEHGSLDSSALTHTGQSFPQLVRTDPQLAG
+ILAEQKLGAEGRRPEVPVMIAHSLTDDVIPYRTGRELGLRWCAEGARVRFDPILTPTHMG
+GYVAALPRMHSFLDAALADRWTPNSCGWF
+>1_137
+MAPVRRPSRPLALAAAVAVVAGFGAPHAALAQESAPAPDAPEVSSAVEDLSQPATTAEDA
+RWNAARDALAAASADDPFYLPPTTLPSTPGALIRTEPTAFYLDPVRLVQVPAHATRIMYA
+SQDAQGRPIAVTGTVLTPTAPWTGAGERPVIGYAVGTQGAADRCAPSRTLSTGVQYEGVG
+ITSLLSRGHAVVVTDYEGLGTPGTHTYMVREAQAHAVLDAVRAAAQVAGSGVTATAPVAL
+AGYSQGGGAAAAAAELAPDYAPELDLKGAYAGAPPADLVQVAGRIDGGLYAAFLLYAMAG
+QLAAYDVDPATHLNETGLTALDGAAETCLAGSLAYAHLDSATLTHTGQDFPELVRSDAEL
+AGILAEQRIGAQGRRPDVPVMIAHSVTDDVIPYRAGRDLGRRWCAEGARVRFDPLLTPTH
+VGGHVASLPRMGAFLDATLADRWTADSCGWF
+>3_2102
+MAPARRPSRPLALAAAVAVVAGFGAPHAALAQESAPAPDAPEVSSAVADLSQPATTAEDA
+RWNAARDALAAASVDDPFYLPPAVVPATPGALIRSEPAAFYLDPVRLVQVPAHATRIMYA
+SQDAQGRPVAVTGTVLTPTAPWTGGGERPVIGYAVGTQGAADRCAPSRTLSTGAQYEGVG
+ITSLLSRGHAVVVTDYEGLGTPGTHTYMVREAQAHAVLDAVRAAAQVSGSGVTSTAPVAL
+AGYSQGGGAAAAAAELASDYAPELDLKGAYVGAPPADLVQVADRIDGGLYAAFLLYAMAG
+QLAAYDVDPATHLNETGLTALAGAAETCVAGSLAYAHLDSATLTHTGQDFPELVRSDAEL
+AGILAEQRIGAPGRRPDVPVMIAHSVTDDVIPYRTGRDLGRRWCAEGARVRFDPLLTPTH
+VGGHVASLPRMGAFLDATLADRWTADSCGWF
+>4_145
+MAPSRPLALAAAVAVVAGFGAPHAALAQESAPAPDAPEVSSAVADLSQPATTAEDARWNA
+ARDALAAASADDPFYLPPATVPATPGALIRTEPTAFYLDPVRLVQVPAHATRIMYASQDA
+QGRPIAVTGTVLTPTAPWTGGGERPVIGYAVGTQGAADRCAPSRTLSTGVQYEGVGITSL
+LSRGHAVVVTDYEGLGTPGAHTYMVREAQAHAVLDAVRAAAQVSGSGVAATAPVALAGYS
+QGGGASAAAAELASEYAPELDLKGAYVGAPPADLVQVADRIDGGLYAAFLLYAMAGQLAA
+YDVDPATHLNETGLTALAGAAETCMVGGLAYAHLDSATLTHTGQDFPELVRSDAELAGIL
+AEQRIGAPGRRPDVPVMIAHSVTDDVIPYRTGRDLGRRWCAEGARVRFDPLLTPTHVGGH
+VASLPRMGAFLDATLADRWTADSCGWF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001794.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001794.fa
new file mode 100644
index 0000000000000000000000000000000000000000..da9c1f140a8b7365fbf77fb93e46dc5e62f07b42
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001794.fa
@@ -0,0 +1,15 @@
+>0_294
+MTVCLGNICRSPAAEAVLHRKLAEAGLADEVTVTSAGTADYHVGDRPHELTRAVGGELGY
+AFESVGVHLAAGHLDEADLVLVMDESNLADVRALAATDEQRAKVRMMGEFASDADTAGVL
+EVPDPYGHPRAQFEDMYRQLEDAADGVVAAIRDGRL
+>1_79
+MRIMTVCLGNICRSPAAEAVLNRKLAEAGLHDVEVTSAGTSDEHVGARPHHLTREVGGEL
+GYEFPTVGVQLSADLVDEADLILVMDEANLADARRLATTDEQRDRIHLMGEFASDADSAG
+VREVPDPYGYPRPQFEEMYRQIEDAADGVVAAIRDGRL
+>3_2043
+MRIMTVCLGNICRSPAAEAVLNRKLAEAGLDDVEVTSAGTSDEHVGARPHHLTREVGGEL
+GYEFPTVGVQLSADLVDDADLILVMDEANLADARRLATTDEQRDRIHLMGEFASDADRAG
+VREVPDPYGYPRPQFEEMYRQIEDAADGVVAAIRDGRL
+>4_73
+MGVQLSAELVDDADLILVMDEANLADTRRLATTDEQRDRIHLMGEFASDADSAGVREVPD
+PYGYPRPQFEEMYRQIEDAADGVVAAIRDGRL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001797.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001797.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ef02dcb09d032e8d60e3d3e161c7d0a4f89b7e1d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001797.fa
@@ -0,0 +1,36 @@
+>0_337
+MSTSLHPPQAVIGEPEVLEDVRADVVSHPAWLRLKAAATALQGLQAKDGSVPDPADHPAA
+GGHVETITAAVAELAPLFPHDAAYLAALPRDFARWRDGGFGVPDFLDSLVAFQPQEHRVD
+GIRHLVVFPMYTQNGSSSRHVEALLVEAIWPEFIAQLEAGDYGNRLFLSLRLLDFTPGYE
+TNSAVLFPETVAMREIPTFTWGAIFQDREAARFRRVVAAAAEITRLDLPEDAAELVADQD
+LAEQTFVMWDLIHDRTHMRGDLPFDPFMIKQRMPFFLYTLEEMRCDLTAFRETVRIEREL
+SARAAAGEELTAVQAQTLRHAKLVQYAVLFDRVFRFALTGSRVRNYDGLGGQLLFAWLHR
+RHVVQWRDVKLTIDWDRLAEAVVELGDAIDRLYWESIDRPKTVHWLKAYELVASVVAPHP
+ASVWAQGLPREVLAGPPKEMTDLVLDDEFPLSMFFEALGKKLRGVIESTAGIRAADA
+>1_47
+MSTTLQPARTDGVASEAPADARTVETHPAWLRLKAAATALQPLQVKDGSIPDPADHAAAR
+EHVETIVAAVEELAPLFPHDAAYLAALPRDFARWADGGFAEPDFLDSLVAFQPQEHRVDG
+VRHLVVFPMYTQNGSPDRHVEALVVETIWPEFIAELEAGDYGNRLFVSLRLIDFTPGYDT
+NSAVLFPETVAMREIPTFTWGAIFQDREAARFRRVVTAAAEVTQLELPAELAELLSSQEL
+AEGTFVMWDLIHDRTHMRGDLPFDPFMIKQRMPFFLYTLEEMRCDMTAFRECVAIERRLT
+ARAAAGEQLTGLEEQTRRHAGLVQHAVLFDRVFRFALTGSRVRNYDGLGGQLLFAWLHRK
+DVIQWRDVELSVDWDRLADAVVELGDAIDTLYWESIDRPKTVHWLQAYELVASVVTPHPA
+SVWAQGLPREVLAGPPKGYTDLVLDDEFPLSMFFEALEKKMRGVIESTAGIRGTDA
+>3_2011
+MSTTLQPAQADVVVPETPADARTVETHPAWLRLKAAATALQPLQVKDGSIPDPADHAAAR
+KHVETIVAAVEELAPLFPHDAAYLAALPRDFARWADGGFAEPDFLDSLVAFQPQEHRVDG
+VRHLVVFPMYTQNGSPDRHVEALVVETIWPEFIAALEAGDYGNRLFLSLRLIDFTPGYDT
+NSAVLFPETVAMREIPTFTWGAIFQDREAARFRRVVTAAAEITQLELPAELAELLSCQEL
+AEGTFVMWDLIHDRTHMRGDLPFDPFMIKQRMPFFLYTLEEMRCDMTAFRECVAIERRLT
+ARAAAGEQLTALEEQTRRHAGLVQHAVLFDRVFRFALTGSRVRNYDGLGGQLLFAWLHRK
+DVIQWRDVELSVDWDRLADAVVELGDAIDTLYWESIDRPKTVHWLQAYELVASVVTPHPA
+SVWAQGLPREVLAGPPKGYTDLVLDDEFPLSMFFEALEKKMCGVIESTAGIRGTDA
+>4_42
+MSTTLQPARTDVVVPETPADARTVETHPAWLRLKAAATALQPLQVKDGSIPDPADHAAAR
+EHVETIVAAVEELAPLFPHDAAYLTALPRDFARWADGGFAEPDFLDSLVAFQPQEHRVDG
+VRHLVVFPMYTQNGSPDRHVEALVVETIWPEFIAELEAGDYGNRLFVSLRLIDFTPGYDT
+NSAVLFPETVAMREIPTFTWGAIFQDREAARFRRVVTAAAEITQLELPAELAELLSCQEL
+AEGTFVMWDLIHDRTHMRGDLPFDPFMIKQRMPFFLYTLEEMRCDMTAFRECVAIERRLT
+ARAAAGEQLTALEEQTRRHAGLVQHAVLFDRVFRFALTGSRVRNYDGLGGQLLFAWLHRK
+DVIQWRDVELSVDWDRLANAVVELGDAIDTLYWESIDRPKTVHWLQAYELVASVVTPHPA
+SVWAQGLPREVLAGPPKGYTDLVLDDEFPLSMFFEALEKKMCGVIESTAGIRGTDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001799.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001799.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1537f953c7210b7ee4706ea859835d157c3de698
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001799.fa
@@ -0,0 +1,40 @@
+>0_384
+MTSSLTTRRTFLGASVGALALAGLTACADPAISPQPSGRILPTDPLVAEYEKRRAASGTT
+VTHRLSAAPLETSLQGRGLTTWGYNDGLNGPLLRAQTGDLLKVSVANDLPEGTSVHWHGL
+ALRNDADGVQGLTQDPIAAGGRYTYGFRLSHPGTYWYHSHFDTQRERALYGALIVEDPNE
+PLSYDQEWVVILDDWLDGITGTPQDVVEELSAGMDMSGDMEGMAGMDHGSMSQDSSSGMP
+MKHMLMGAESDYLGGDAGDVKIPVHLFNGRPPSDPDTFSSTPGNRIRLRLINAAGDTAYR
+VGIPGQELTITHTDGFPVQPRQADAVVLGMGERLDVLITLGDQAVPVLALPEGKTGHAYG
+IIAAGPKTTLSGRLPQTLGGTVLDGSRLKAHESVLLPPKDPTRTHEVRLTGSMMEYDWGI
+NGRRFDPANPFEGAFELRLDERVRVTMTNDTDMWHPMHLHGHTFQLADHGARKDTVIIKP
+RQTIVFDFEADNPGQWLTHCHNAYHAEAGMMGVFSYIH
+>1_603
+MTSSLTTRRTFLGASVGALALAGLAACADPAISPQPSGRILPTDPLVAEYEKRRAASGTT
+VTHRLSAAPLETSLQGRGLTTWGYNDGLNGPLLRAQTGDLLKVSVANDLPEDTSVHWHGL
+ALRNDADGVQGVTQDPIAAGGRYTYGFRLSHPGTYWYHSHFDTQRERALYGALIVEDPNE
+PLSYDQEWVVILDDWLDGITGTPQDVVEELSAGMDMSGDMEGMAGMAGMDHGSMSQDSSS
+GMPMKHMLMGAESDYLGGDAGDVKIPVHLFNGRPPSDPDTFSSTPGNRIRLRLINAAGDT
+AYRVGIPGQELTITHTDGFPVQPRQADTVVLGMGERLDVLITLGDQAVPVLALPEGKTGH
+AYGIIAAGPKTTLSGRLPQTLGGTVLDGSRLKAHESVLLPPKDPTTTHEVRLTGSMMEYD
+WGINGRRFDPANPFEGAFELRLDERVRVTMTNDTDMWHPMHLHGHTFQLADHGARKDTVI
+IKPRQTIVFDFEADNPGQWLTHCHNAYHAEAGMMGVFSYIH
+>2_2149
+MTSSLTTRRTFLGASVGALALAGLAACADPAISPQPSGRILPTDPLVAEYEKRRAASGTT
+VTHRLSAAPLETSLQGRGLTTWGYNDGLNGPLLRAQTGDLLKVSVANDLPEDTSVHWHGL
+ALRNDADGVQGVTQDPIAAGGRYTYGFRLSHPGTYWYHSHFDTQRERALYGALIVEDPNE
+PLSYDQEWVVILDDWLDGITGTPQDVVEELSAGMDMSGDMEGMAGMAGMDHGSMSQDSSS
+GMPMKHMLMGAESDYLGGDAGDVKIPVHLFNGRPPSDPDTFSSTPGNRIRLRLINAAGDT
+AYRVGIPGQELTITHTDGFPVQPRQADAVVLGMGERLDVLITLGDQAVPVLALPEGKTGH
+AYGIIAAGPKTTLSGRLPQTLGGTVLDGSRLKAHESVLLPPKDPTRTHEVRLTGSMMEYD
+WGINGRRFDPANPFEGAFELRLDERVRVTMTNDTDMWHPMHLHGHTFQLADHGARKDTVI
+IKPRQTIVFDFEADNPGQWLTHCHNAYHAEAGMMGVFSYIH
+>4_578
+MTSSLTTRRTFLGASVGALALAGLAACADPVISPQPSGRILPTDPLVAEYEKRRAASGTT
+VTHRLSAAPLETSLQGRGLTTWGYNDGLNGPLLRAQTGDLLKVSVANDLPEDTSVHWHGL
+ALRNDADGVQGVTQDPIAAGGRYTYGFRLSHPGTYWYHSHFDTQRERALYGALIVEDPNE
+PLSYDQEWVVILDDWLDGITGTPQDVVEELSAGMDMSGDMEGMAGMAGMDHGSMSQDSSS
+GMPMKHMLMGAESDYLGGDAGDVKIPVHLFNGRPPSDPDTFSSTPGNRIRLRLINAAGDT
+AYRVGIPGQELTITHTDGFPVQPRQADAVVLGMGERLDVLITLGDQAVPVLALPEGKTGH
+AYGIIAAGPKTTLSGRLPQTLGGTVLDGSRLKAHESVLLPPKDPTRTHEVRLTGSMMEYD
+WGINGRRFDPANPFEGAFELRLDERVRVTMTNDTDMWHPMHLHGHTFQLADHGARKDTVI
+IKPRHTIVFDFEADNPGQWLTHCHNAYHAVAGMMGVFSYIH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001800.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001800.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6bb09b20ccf637198870feeb6c672bf8f177e7eb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001800.fa
@@ -0,0 +1,24 @@
+>0_385
+MTPLTRRTLIAGGLTLLGAGTLTACAAPNPATSPAAGTGTQGTGTAITHVHALTRDPESG
+EVLLATHQGLFRLQDGELTQVGPVVDFMGFTLTPEGRYLASGHPAPNTDLPEPLGLAEST
+DRGQSWTVLSRGGQSDFHALAAGPNGVLGFDGQLRASTDGLTWQSLEIPVAPASLAISPQ
+TGTVLATTETGMLRSTDHGATWTTLDTPQLMHLVAWADDTTAVGAGTEGHLLTSTDAGDT
+WTASDRPVGTATALGAGITDDGQTEALLVVGSTVLSTTDGGNTTESLL
+>1_604
+MTPLTRRTLIAGGLTLLGAGTLTACAAPNPATSPAAGTGTQGTGTAITHVHALTRDPESG
+EVLLATHQGLFRLQDGELTQVGPVVDFMGFTLTPEGRYLASGHPAPRTDLPEPLGLAEST
+DRGQSWTVLSRGGASDFHALAAGPNGVLGFDGQLRASTDGLTWQSLEIPVAPASLAISPK
+TGTVLATTETGMLRSTDHGATWTTLDTPQLMHLVAWADDTTAVGAGTEGHLLTSTDAGDT
+WTASDRPVGTATALGTGITDDGQTEALLVVGSTVLSTTDGGNTTESLL
+>2_2148
+MTPLTRRTLIAGGLTLLGAGTLTACAAPNPATSPAAGTGTQGTGTAITHVHALTRDPEYG
+EVLLATHQGLFRLQDGELTQVGPVVDFMGFTLTPEGRYLASGHPAPRTDLPEPLGLAEST
+DRGQSWTVLSRGGASDFHALAAGPNGVLGFDGQLRASTDGLTWQSLEIPVAPASLAISPQ
+TGTVLATTETGMLRSTDHGATWTTLDTPQLMHLVAWADDTTAVGAGTEGHLLTSTDAGDT
+WTASDRPVGTATALGTGITDDGQTEALLVVGSTVLSTTDGGNTTESLL
+>4_577
+MTPLTRRTLIAGGLTLLGAGTLTACAAPNPATSPAAGTGTQGTGTAITHVHALTRDPESG
+EVLLATHQGLFRLQDGELTQVGPVVDFMGFTLTPEGRYLASGHPAPRTDLPEPLGLAEST
+DRGQSWTVLSRGGASDFHALAAGPNGVLGFDGQLRASTDGLTWQSLEIPVAPASLAISPQ
+TGTVLATTETGMLRSTDHGATWTTLDTPQLMHLVAWADDTTAVGAGTEGHLLTSTDAGDT
+WTASDRPVGTATALGTGITDDGQTEALLVVGSTVLSTTDGGNTTESLL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001804.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001804.fa
new file mode 100644
index 0000000000000000000000000000000000000000..94688f474a626db92b7a3aa1fc56b9201eebc472
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001804.fa
@@ -0,0 +1,22 @@
+>0_441
+MESTQPFVLSLGAVLAAAGLDPHDVLAIRHTYKESGLPSRAAATPERVLAYTREQHHVGK
+FPKEPARHWLIFMGEGGRRSRLTAVYENRGEAVAERTERYRYYDVAPVPLLASLEERLVV
+EWSADPVNWAKRGPLAARFPVLEIADPSTEAFPGFDHVLLSYGDLQSMVTETRYAGWRTA
+LEAVRGIYLIADETAGQCYVGKADGERGVLGRWEAYARDGHGGNVALRDALELDPAQPER
+YTFSLLRVFGSNTPQVQIDAAEKHYKEALMTRRFGLNRN
+>1_2212
+MPHSDPVPEPFVLTLGSVLDAAGLDPHEVLAIRHTYKESGLPSRAAATPERVLAYTREQH
+HLGKFPKEPARHWLIFMGEGGRRSRLTAVYENRGEAVAERTERYRYYDVAPVPLLASLEE
+RLVVEWSADPVNWAKRGPLAARFPVLEIADPTTEAFPGFDHVLLSYGGLQSMVTETRYAG
+WRTALQAVRGIYLIADETAGQCYVGKADGERGVLGRWEAYARDGHGGNVALRDALELDPA
+QPERYTFSLLRVFGSNTPQAQIDAAEKHYKEALMTRRFGLNRN
+>2_391
+MPLLASLEERLVVEWSADPVNWVKRGHLAARFPVLEIADSTTEAFPGFDHVLLSYGDLQS
+MVTETRYAGWRTALQAVHGIYLIADDAASQCYVGKADGERGVLGRWEAYARDGHGGNVAI
+RDALELDPAQPERYTFSLLRVFGSNTPQAQIDAAEKHYKDALMTRRFGLNRN
+>3_1915
+MESTQPVPEPFVLTLGAVLAAAGLDPHDVLAIRHTYKESGLPSRAAATPERVLAYTREQH
+HVGKFPKEPARHWLIFMGEGGRRSRLTAVYENRGEAVAERTERHRYYDVAPVPLLASLEE
+RLVVEWSADPVNWAKRGPLAARFPVLEIADPTTEAFPGFDHVLLSYGDLQSLVTETRYAG
+WRTALQAVRGIYLIADETAGQCYVGKADGERGVLGRWAAYARDGHGGNVALRDALELDPA
+QPERYTFSLLRVFGSSTPQAQIDAAEKHYKEALMTRRFGLNRN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001806.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001806.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8b4ac7518c524b943269e334613bee0f2e86ef1a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001806.fa
@@ -0,0 +1,12 @@
+>0_445
+MTRLLPGDSLTLDLAPEDPADLLARLRAAGVAMNESAERLITDARVCAVVPERVTVVERT
+LAELGLPDGGTLPELRRAVEAAGLRECPPTVAPLLRLVTLDQANAPDSLLRHGRAPDDSA
+HVFSPSLSDEPGVHRGLYLRVVDHVPWLRGFVCDDLHVFGPEDRWILAL
+>1_2198
+MNVSAEQLIGDESGVHRGLYRRVVDHVPWLRGFVCDDLHNFGPEDRWILAR
+>2_683
+MADLIDRAGIELTLAGDPHELLTQLQAAGVRFNDSARTLLFRPALARDLQTSRPVRVVER
+SLTDLGLPNGGTLPQLRRAALAAGLAPCPPAVAPLLRLRTLDQVNAPDSVLRHGRAPEGS
+VHVLSPSLGEDPRVHRGFYLRVVDEAPWLRGFMCDDLHVMGADDRWVLSAPTSAP
+>4_2130
+MNVSAEQLIGDESGVHRGLYRRVVDHVPWLRGFVCDDLHNFGPEDRWILAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001807.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001807.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f729809d0d1a7846cd8f5b1ae09cd2ff99d19371
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001807.fa
@@ -0,0 +1,20 @@
+>0_498
+MTITAAETQSLTAEATAVLAAMPGVSYAQFLAEAPEVPGIVAVVADQAARARLGVEAEET
+GLLAVTVAPYGLRARDVRAAFQSGRTAVSPLRQALAALLEDELGLDVERTSPGAAGAGFT
+LTPESEDALTAWMRAHLTLRAWATQDASVLADVADQVNADLAPALALDGVAAPSAHLRER
+LAAMTAAARRSATI
+>1_2160
+MTITAIDTSSLTTEAAAVLAATPGMRYAEFLTAAPAVPGIVAVVADESARAALGLTPAAG
+DVLAVDVADESLQCREVRAAFQSGRTGGSPLRQAFAALLAGELGLDVERTSPGAAGAGFA
+LTPESEETLTAWMREHLTLRAWVAQDASALEGVAREVAADLAPALQPGALEAPVAQRVAA
+MRASARRSATL
+>3_1887
+MTITAVDTPSLTAEAAAVLAATPGMRYAEFLTAAPAVPGIVAVVAEESARAALGLTPAAG
+DVLAVDVADESLQCREVRAAFQSGRTGVSPLRQAFAALLAGELGLDVERTSPGAAGVGFA
+LTPESEETLTAWMREHLTLRAWVAQDASALEGVAREVAADLAPALQPGALEAPVAQRVAA
+MRASARRSATL
+>4_2100
+MTITAVDTPSLTTEAAAVLAATPGMRYAEFLTAAPAVPGIVAVVAEESARAALGLTPAAG
+DVLAVDVADESLQCREVRAAFQSGRTGVSPLRQAFAALLAGELGLDVERTSPGAAGAGFA
+LTPESEETLTAWMREHLTLRAWVSQDASALEGVAREVAADLAPALQPGALEAPVAQRVAA
+MRASARRSATL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001808.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001808.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ad9c8ecf875a75ecae69a820769366ae8fcf659e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001808.fa
@@ -0,0 +1,16 @@
+>0_512
+MEHIDETALPAPQDRVATASREVDAPAGVVFELIADPARQPEWDGNDNLAGAEPGQRVTA
+AGDVFVMTLRKGVDRANHVVEFEEGRRIAWKPSEVGGEPFGQLWRWEVEGIRDEPRCRVT
+HTYDWTELTDPGRIRRALRTGPEQLRASIDRLAELARTQPQA
+>1_2153
+MEHIDETALPAPEDRVVSATRHVDAPAGVVFELIADPSRQPEWDGNDNLAEAAPGQRVTA
+VGDVFVMTLQKGVDRANHVVEFEEGRRIAWKPSEVGGEPFGQLWRWEVEGDDEGGCRVTH
+TYDWTALTDPKRVQKALRTGEGQLRASIDRLAELAERQG
+>3_1877
+MEHIDETALPAPEDRVVSATHHVDAPAGVVFELIADPSRQPEWDGNDNLAEAAPGQRVTA
+VGDVFVMTLQKGVDRANHVVEFEEGRRIAWKPSEVGGEPFGQLWRWEVEGDDEGGCRVTH
+TYDWTALTDPKRIQKALRTGEEQLRASIDRLAELAERQD
+>4_2093
+MEHFDETALPAPEDRVVSATRHVDAPAGVVFELIADPSRQPEWDGNDNLAEAAPGQRVTA
+VGDVFVMTLQKGVDRANHVVEFEEGRRIAWKPSEVGGEPFGQLWRWEVEGDDEGGCRVTH
+TYDWTALTDPKRIQKALRTGEEQLRASIDRLADLAERQG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001815.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001815.fa
new file mode 100644
index 0000000000000000000000000000000000000000..03b2332077ea25a1b22cba199e7afb75870eb7a2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001815.fa
@@ -0,0 +1,13 @@
+>0_543
+MSESTGFSAAEKAAMAERAEELRAQRGGKKKADALQDLMEKIEAMPEQDRALAVAVHQIV
+TEVAPELEPRTWYGMPAYARGKDVLVFLQVSSKFDVRYTTLGFNESAALDDGPMWPTAYA
+LTALNDDVRARIADLVRRAVG
+>1_2127
+MSESTGFSAAEQAAIAERAQELRAQRGGKKKADALQDLLATIEEMPEPDRALAVAVHRIV
+TEVAPELDPRT
+>3_1852
+MSESTGFSAAEQAAIAERAQELRAQRGGRKKADALQDLLVKIEEMPEQDRAMAVGVHRIV
+TEAAPELEPRTWYGMPAYARGTDVLVFLQVSSKFGVRYTTLG
+>4_2073
+MTESTGFSAAEQAAIAERAQELRAQRGGKKKADALQDLLAKIEEMPEQDRAMAVAVHRIV
+TEAAPELEPRTWYGMPAYARGTDVLVFLQVSSKFGVRYTTLG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001816.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001816.fa
new file mode 100644
index 0000000000000000000000000000000000000000..30bd982ddfd34791af5991e89d166a8036746ea2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001816.fa
@@ -0,0 +1,24 @@
+>0_544
+MPSSAAPPSDAASSRPDRRGSSGSVGTASRTLLLVVVMALFIWLATSVRLPDIDTLRDRL
+ASFGFWSWLVFVLAYAGVALTPVPVTLMALTGGVLFGAVQGSVLSVAGALLGSIGAYWIA
+RALGRDVILRGLGRHADTVEEHLEDAGFLALLTLRVAPGLPYWPVNYGAGALGVPSGMFV
+GSTAVGVIPGQVSLVALGAFAVHPGVLNGVILGAGWLAVGVLTVWAARHWRRAANHDDGE
+GGED
+>1_2126
+MPSTAVPPRDSGAASTLPARTGHRGVSILRTAALVLVVAAFVWLALTVRLPGVDELRAQL
+DGFGWWSWLAFTVLYAAVALTPIPVTIMAVTAGVLFGAIEGTVLSVVGALLGSLGAYGIA
+RAVGREVVLRWLGRHAETVERRLEDTGFLALLTLRVAPGLPYWPVNYGAGALAVPLGIFA
+GSTAVGVIPGQLSLVAMGAFAVRPGVVNGVLLGVGWLTVGGLTLWAVRHWRRAARSAEEP
+ENPQSGHDTPSPRRRRGVS
+>3_1851
+MPSTAVPPRDSGAASTLPARTGHRGVSILRTAALVLVVAAFVWLALTVRLPGVDELRAQL
+DGFGWWSWLAFTVLYAAVALTPIPVTIMAVTAGVLFGAIEGTVLSVVGALLGSLGAYGIA
+RAVGREVVLRGLGRHAETVERRLEDTGFLALLALRVAPGLPYWPVNYGAGALAVPLGIFA
+GSTAVGVIPGQLSLVAMGAFAVRPGVVNGVLLGVGWLAVGGLTLWAVRRWRRAARAAEGP
+AGSEGPESPRSGQDTPSPRARRGVS
+>4_2072
+MPSTAVPPRDSGAASTLPARTGHRGVSILRTAALVLVVAAFVWLALTVRLPGVDELRAQL
+DGFGWWSWLAFTVLYAAVALTPIPVTIMAVTAGVLFGAIEGTVLSVVGALLGSLGAYGIA
+RAVGREVVLRWLGRHAATVERRLEDTGFLALLTLRVAPGLPYWPVNYGAGALAVPLGIFA
+GSTAVGVIPGQLSLVAMGAFAVRPGVVNGVLLGVGWLAVGGLTLWAVRRWRRAARAAEGP
+AGSEGPESPRSGQDTPSPRARRGVS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001824.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001824.fa
new file mode 100644
index 0000000000000000000000000000000000000000..72c84d5a439ae0a10ee9f713c5333e8ee488b76a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001824.fa
@@ -0,0 +1,19 @@
+>0_652
+MAFAALSRSARLAGLSAAALLALTACGGQDSSDADASASTTAPASESAQSSESSSASASS
+LSAAPADYEAGTCFTAPLGARDLSTFETTDCEGAHIAEYLWAVPAVAEGEEADPAAAQTC
+TAQAQRLSEEKEDQLNGAVLTSSELGNYGTDEKHCVVYGVSGEWEGQIVDPELTLDEAIA
+ASAGA
+>1_2047
+MAFAALSRSARLAGLSAAALLALTACGGQDSSDADASASTTAPASASAQGAESSSASASS
+LSAAPADYEAGTCFTAPLGARDLSSFETTDCEGAHTAEYLWAVPAVAEGEEADPAAAQTC
+TAQAQRLSEEKEDQLNGAVLTSSELGNYGTDEKHCVVYGVSGEWEGQIVDPEITLETASA
+DA
+>3_1765
+MAFAALSRSARLAGLSAAALLALTACGGQDSSDADASASTTAPASASAQGVESSSASASS
+LSAAPADYEAGTCFTAPLGARDLSSFETTDCEGAHTAEYLWAVPAVAEGEEADPAAAQTC
+TAQAQRLSEEKEDQLNGAVLTSSELGNYGTDEKHCVVYGVSGEWEGQIVDPEITLETASA
+DA
+>4_1988
+MAFAALSRSARLAGLSAAALLALTACGGQDSSDADASASASAQGSESSSASASSLSAAPA
+DYAAGTCFTAPLGARDLSSFETTDCEGAHTAEYLWAVPAVAEGEEADPAAAQTCTAQAQR
+LSEEKEDQLNGAVLTSSELGNYGTDEKHCVVYGVSGEWEGQIVDPEITLETASADA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001826.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001826.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b3a59484b8d0b668d218b368fba17d4bca000115
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001826.fa
@@ -0,0 +1,24 @@
+>0_661
+MSGGRPAGALTVSVVIPVLDDAAHLRECLRHLARQTRPADEVIVVDNGSADESSAVARKA
+GARVVAEPLRGISAAAAAGYDAAVGDVILRCDADTRPPPDWVARAAGRFEAEPDLAALTG
+PGTFYDQPRLLARLRSRAYGAAYRFGAGAAVAGTALWGSNLGLRAEAWRAVRGRVHRRRP
+DVHDDLDLSFHLGLADVGSVVHDRRLHVGAAGRIFTSLPARVRQLRMAVTTLRLNWALLS
+PGMRWVRRARRSR
+>1_2039
+MTPARPTVSVVVPVLDDAEHLRVCLALLAAQSRPALEVVVVDNGCVDDSAVLARAAGARV
+VHEPRRGVPAAAAAGLDAAVGELLVRCDADTRMPADWLERIVARFDADSGLDALTGPGTF
+HDQPGLRGRVRAALYTGAYRWGAGAAVAATPVWGSNCALRAEAWQAVRTRVHRERGDVHD
+DLDLSFQLALAGRRIRFDPDLRVEVAGRIFHSLRQRVRQGRMAVTTLQVNWARLSPGRRW
+LRRAARSRPRPHWGRGPDGQSRD
+>3_1757
+MTPARPTVSVVVPVLDDAEHLRVCLALLAAQSRPALEVVVVDNGCVDDSAVLARAAGARV
+VHEPRRGVPAAAAAGLDAAVGELLVRCDADTRMPADWLERIVARFDADSGLDALTGPGTF
+HDQPGLRGRVRAALYTGAYRWGAGAAVAATPVWGSNCALRAEAWQAVRTRVHRERGDVHD
+DLDLSFQLALAGRRIRFDPDLRVEVAGRIFHSLRQRVRQGRMAVTTLQVNWARLSPGRRW
+LRRAARSRPRPHWGRGPDGQSRD
+>4_1980
+MTPARPTVSVVVPVLDDAEHLRVCLALLAAQSRPALEVVVVDNGCVDDSAMLARAAGARV
+VHEPRRGVPAAAAAGLDAAVGELLVRCDADTRMPADWLERIVARFDADPGLDALTGPGTF
+HDQPGLRGRVRAALYTGAYRWGAGAAVAATPVWGSNCALRAEAWQAVRTRVHRERGDVHD
+DLDLSFQLALAGRRIRFDPDLRVEVAGRIFHSLRQRVRQGRMAVTTLQVNWARLSPGRRW
+LRRAARSRPRPHWGRGPDGQSRD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001828.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001828.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1cc26099e12897a21865fb217dcc89e80fd8d675
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001828.fa
@@ -0,0 +1,16 @@
+>0_669
+MTDADLDDMCRLLGDAEAMRYYPRAKSRNEVQRWINWSKDNYAKHGFGLWVIEHRTTGDF
+IGDCGLTWQNVDGQEVLEVGYHVLPERQGQGLATEGASACLRHGFETLDATMVTAIINPD
+NMASRRVAERIGMTVWKSTRDPSGAPIVVYSSHGQEA
+>1_2030
+MTDADLDDMFRLLGDAEVMRYYPRAKSRNEVRRWINWSKDNYATHGFGLWVIEHRTTGDF
+IGDCGLTWQNVDGQEVLEVGYHVLPEHQGQGLATEGASACLRHGFETLDATMVTAIINPD
+NMASRRVAERIGMTVWKSTRDPRGAPIVVYSSHGHEA
+>2_586
+MTDADLDDMCRLLGDAEVMRYYPRAKSRNEVQRWINWSKDNYAEHGFGLWVIEHRATGDF
+IGDCGLTWQNVDGQEVLEVGYHVLPERQGQGLATEGASACLRYGFETLCATMVTAIINPD
+NMASRRVAERIGMTVWKSTRDPSGAPIVVYSSHGQEA
+>3_1749
+MTDADLDDMCRLRGDAEVMRYYPRAKSRNEVQRWINWSKDNYAKHGFGLWVIEHRTTGDF
+IGDCGLTWQNVDGQEVLEVGYHVLPERQGQGLATEGASACLRHGFETLDATMVTAIINPD
+NMASRRVAERIGMTVWKRTRDPSRAPIVVYSSHGQEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001830.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001830.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9459614926b4ef48089eeee886e79a2f8683d822
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001830.fa
@@ -0,0 +1,32 @@
+>0_672
+MRAALAMKVGGKFEIHDVVIDDPVGREVLVDVKASGLCHSDLHLIDHDFGLPLPAAGGHE
+ISGIVAAVGPSVTSLKPGDRVVACLISYCGACARCLSGQTTLCLNQEALVRGPEEKPRLT
+LEDGTPVAQSVNVGGFAEQVLVHENQLAVVNEDIPFPHAALIGCSVVTGAGAAINTAHVR
+PGDTVAVVGVGGIGLNAVSGARLCGAKRVIAIDLDDSKLEAARRFGATDVVNSGSGDAVG
+AVLGITGTGVDHAFEAIGLPVTQQLTQDVLGPGGTAYLIGIAPPGTTAQFGASLDSLFAQ
+RRLQAVLMGSSNIQRDIPLYADLYVQGRMELDHMVSQEISLDEINAGYERLLNGEVIRSV
+ITSF
+>0_757
+MKTTAAVATAAETPLTITEVEIDDLRADELRIRMVASGVCHTDAIVRDQWYPTPLPAVLG
+HEGAGVVEEVGDGVHGFSAGDRVLLSFSSCGHCRACHEGQPAYCADMFALNFGGRRLEDG
+STSYTLDGEQVSSHFFGQSSFAALANVPARCAVKVDDDAPLELLAPLGCGIQTGAGAVLN
+VLRPEPGASLVVFGAGAVGLSAVMAAKVARCGTIIAVDMHPDRLRLAEELGATHTLQAGE
+PVAERIRELTDGGTEYAVDTTGVAAIFGDNVDALAPRGVLGVVGAAALGTEASFDIGTNL
+PKGITIRTIVEGESIPQVFVPRLMALHAAGEFPFDRLVKSYPFAQINQAFEDSKSGETLK
+PVVVFDQA
+>3_82
+MTRSTSTRIQGAVLQTLSATAPYAQSRPLEVQDLQLAPPQGREVLVRIEAASVCHSDLSV
+VQGLRPRPVPMLLGHESAGIVESTGPEVASVAVGDRVIMTFLPRCGECPACRTEGRLPCS
+EGTAANERGDLLSGGRRLSTEDGPVAHHLGVSGFATHAVVDARSVVRVEHDVPADIAAVL
+GCAVLTGGGAVMNAVSVPKGSTVVVVGLGGVGMAAAIVARALGHEVIGVDGISTKRDLAV
+ELGAQQVYAPQEALDAEVRGDLVVDATGNPRGFETAVELTGPGGATVTVGLPPADAMSSV
+SPMALVAQARTIVGSYLGSAVPQRDIPRFVELWRAGRLPIERLISSHISLEDINQAMDRL
+DSGAEMRQVILFDQEQPSQGQE
+>3_1746
+MRAALAMKVGGKFEIHDVVIDDPVGREVLVDVKASGLCHSDLHLIDHDFGLPLPAAGGHE
+ISGVVAAVGPSVTSLKPGDRVVACLIAYCGACARCLAGQTTLCLNQEAVVRGPEEKPRLT
+LQDGTPVAQSVNVGGFAEQVLVHENQLAVVNEDIPFPQAALIGCSVVTGAGAAINTAHVR
+PGDTVAVVGVGGIGLNAVSGARLCGAKRVIAIDLDDSKLEAARRFGATDVVNSGSGDAVE
+AVLGITGTGVDHAFEAIGLPVTQQLAQDVLGPGGTAYLIGIAPPGTTAQFGASLDSLFAQ
+RRLQAVAMGSSNIQRDIPLYADLYVQGRMDLDHMVSQEISLDEINTGYERLLNGEVIRSV
+ITSF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001836.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001836.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5e1aa85e10bdba8cdcbc0e74f97d45e7aa5a6ea1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001836.fa
@@ -0,0 +1,18 @@
+>0_748
+MSTHDHDHDPADPRRATTSAPASLEPEIEAMHAARGNEEDRDWALLLVGVLVVDGVSTAA
+ARRHLRRAAEAVAQSGEGPDELFGTPVEFAAQMRADAAEAGEPIVDSTPDASWRDVPVVG
+FTVAAAISVLFFVVWLVRDGLTTEYSWGLLAGPVLMSLLGVGAMTLWERLLPRVSRLVAV
+LAAGAAFVVVVGGLAGWLVTGGGTETLFTGSTFWLLALAPVHAALAWLANRVLPEARPVA
+TSSADPLDDDAWARELAGTLRLRMQLSDARIREIVREAQAHAADAGRPLAEEFGAPAGYA
+SRFAKDGVAGKRRMAWFFTALAGLVVLTNVAGAVEDGGIDAWSVAQILVLVLVVGVSWRE
+YRAAVRRRDAVAPGAGGR
+>1_1993
+MLVLLILATRLPGVVAGERLSVWDVAYLLLAVVVLVSEWRDYRAAVRRARR
+>3_1710
+MTIRPHSDPVTPDATWRDVPVLGFTVAAGIAVLFCLVWLLRDGLTTDYTWGLLLSPVLMS
+VPGAAVMVLWERLLARVPRLAATLVAVAALLALGLVLAWWLVEVNAQTHLFTGSTFWLLA
+VAPVCAGLAWLAHRLLPPARRPVGEPPAALDDDAWARRLAGVLRLRKDLPDARVAEIVRD
+ARARGAAAGRPLAEELGSPESYAAGFQKDRVAAPRRRAWAVTALVLLILATRLPGVVAGE
+RLSAWDVAYLLVAVVVLVWTWLDYRAAVRRARR
+>4_1928
+MLLILATRLPGVVAGERPSAWDVAYLLLAVVVLVSEWCGYRAAVRRARR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001837.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001837.fa
new file mode 100644
index 0000000000000000000000000000000000000000..33ba38811a84f1a129304f723e0a6539db1b7e7c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001837.fa
@@ -0,0 +1,31 @@
+>0_754
+MEHTLVRPPKAAPGDRIAVVSPSFAAPGFAPEVHEQAMRRLRELTGLEPVEYPTTRELGA
+SPEDRARDLNAAFADPRIRAVFATVGGEDQITVIGHLDAAAVRADPKPFLGYSDNTNLHQ
+WLWAHGVASFHGGSTQVHLGPGPGVDAVHAASLRAALLTGERLEITEPGESEDVGVDWQD
+PRALAEFGQREPVAADDDGLGGPGASPWRWAGPQRSVTGRTWGGNLEVLQWVLAAGRGPV
+DVAALRGGVLLLETSEELPSATDVRRMLRVLGERGILGEVAAVLAARPPVSDFDVRPDAQ
+ERARLRRAQADVMVETVHRYNPDAVVCVGVPFGHTRPQWILPHGGEMTVDGVEKRVWAEF
+G
+>1_1983
+MRRLAEVTGLVPVEYPTTRQLGASPESRARDLNAAFADPQIRAVIATVGGEDQITVIGHL
+DADAVRADPKPFLGYSDNTNLHQWLWANGVASFYGGSTQVHLGPGPAVDEVHAASLRAAL
+LTGGRLEITEPGESEDHGVDWLDPRALTEFGTREPVPGPHDDGARGVGAGASPWRWAGPR
+RAVTGRTWGGCLEVLPWVMAAGRGPADMAVLEGGVLLIETSEELPSAGEVRRLLRILGES
+GVLGAVDAVLAARPPTRSFEVPRGAEERARRRAEQADVVLEEVGRYNPDAVVCVGVPFGH
+TRPQWVLPHGGVMTVDGAERRVWAEYC
+>3_1700
+MASRYAPGMTQPLVHPPKAQPGDRIAVVSPSFAAPGFAPAVHEQAMRRLAEVTGLVPVEY
+PTTRQLGASAEDRARDLNAAFADPQIRAVIATVGGEDQITVIGHLDADAVRADPKPFLGY
+SDNTNLHQWLWANGVASFYGGSTQVHLGPGPAVDEVHAASMRAAMLTGGRLEITEPGESE
+DHGVDWLDPRALTEFGERDPVPCPHDDGARGVGEGASPWRWAGPRRAVTGRTWGGCLEVL
+PWVMAAGRGPADMAVLEGGVLLIETSEELPSAGEVRRLLRILGERGVLGAVDAVLAARPP
+TSSFEAPRGAEERARRSAEQADVVVEEVGRYNPDAVVCVGVPFGHTRPQWVLPHGGVMTV
+DGVERRVWAEFG
+>4_1918
+MTQPLVHPPKAQPGDRIAVVSPSFAAPGFAPAVHEQAMRRLAEVTGLVPVEYPTTRQLGA
+SPEDRARDLNAAFADPQIRAVIATVGGEDQITVIGHLDADAVSADPKPFLGYSDNTNLHQ
+WLWANGVASFYGGSTQVHLGPGPAVDEVHAASLRAALLTGGRLEITEPGESEDHGVDWLD
+PRALTEFGTREPVPGLHDDGARGVGGAPGAGASPWRWAGPQRAVTGRTWGGCLEVLPWVM
+AAGRGPADMAVLEGGVLLIETSEELPSAGEVRRLLRILGERGVLGAVDAVLAARPPTSSF
+EAPRGAEERARRSAEQADVVVEEVGRYNPDAVVCVGVPFGHTRPQWVLPHGGVMTVDGVE
+RRVWAEFG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001845.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001845.fa
new file mode 100644
index 0000000000000000000000000000000000000000..db3bbe3ac4f2f8a097a9f4a8e284370564ab2dd2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001845.fa
@@ -0,0 +1,36 @@
+>0_830
+MTLADAYVFDAVRTPFGKIGGKLAGTRPDDLAAHVIRTIVDRAPGLEGLRRESAQDVADE
+LKGRPIEAGTDRARPDRIDEVVFGNANGAGEENRNVGRMASLLAGLPVSIPGTTVNRLCG
+SSLDAAIIASRQINTGEADVMLVGGVESMSRAPWVLPKTSRPFPLHNLEAVNTTLGWRLI
+NDAMPKDWTISLGESTERLRERFGITRERQDEFAARSHQLTAKAWEEGRYDSLVAAVPGT
+DLERDETVRPDSTPETLAGLRTVFRKEDGTVTAGNASPMNDGASAALLGSEKGAEILGLQ
+PIARIAGRATAANEPDFFGYAPVEAVNLALKRAGIGWKDVAAVELNEAFAAQSLACLDAW
+GVDPEIVNAWGGAIAVGHPLGASGTRVLGTLARRLQDTGDRWGVAALCIGVGQGIAVVLE
+NVDAR
+>2_768
+MCVDRTSLARPRGRAYGEAMSLTDAYVFDAVRTPFGKIGGKLAGVRPDDMAAHVVRALVD
+RAPGLEGLRAESAQAVADAAAGHPIEAGTDAAAPQKIDDVVFGNANGAGEENRNVGRMAT
+LLAGLPLSIPGTTVNRLCGSSLDAAIIASRQINTGEADVVLVGGVESMSRAPWVLPKTSR
+PFPMHNLEAANTTLGWRLINDAMPSQWTVSLGEATEQLRERFDVSRERQDEFAARSHQLT
+AKAWDEGRYDDLVTVVPGTDLERDETVRPDSTPETLAGLRTVFRKENGTVTAGNASPMND
+GASAAFLGSEKGAEVLGLPPIARIAGRATAANEPNFFGYAPVEAANVALRRAGITWKDVA
+AVELNEAFAAQSLVCVDAWGVDPEIVNAWGGAIAIGHPLGASGTRVLGTLARRLQATGER
+WGVAALCIGVGQGIAVVLENVDAR
+>3_1652
+MSLTDAYVFDAVRTPFGKVGGALSGVRPDDMAAHVVRTLVDRAPGLEGLRAASAQAVADA
+AAGRPIEAGTDAAAPQRIDEVVFGNANGAGEENRNVARMATLLAGLPLSIPGTTVNRLCG
+SSLDAAIIASRQINTGEADVVLVGGVESMSRAPWVLPKTTRPFPMHDLAAANTTLGWRLI
+NDAMPPEWTVSLGEATELLRERFGISRERQDEFAARSHRLTARAWDEGRYDSLVAAVPGT
+DLERDETVRPDSTPETLAGLRTVFRRENGTVTAGNASPMNDGASAALLGSSTGADVLGLE
+PLARIAGRATAANEPDFFGYAPVEAVNRALSRAGIGWKDVAAVELNEAFAAQSLACTDAW
+GVDPEIVNAWGGAIAIGHPLGASGTRVLGTLARRLEASGERWGVAALCIGVGQGIAVVLE
+NVAAR
+>4_1870
+MSLTDAYVFDAVRTPFGKVGGALSGVRPDDMAAHVVRTLVDRAPGLEGLRAASAQAVADA
+AAGRPIEAGTDAAAPQRIDEVVFGNANGAGEENRNVARMATLLAGLPLSIPGTTVNRLCG
+SSLDAAIIASRQINTGEADVVLVGGVESMSRAPWVLPKTTRPFPMHDLAAANTTLGWRLI
+NDAMPPEWTVSLGEATELLRERFGISRERQDEFAARSHRLTARAWDEGRYDSLVAAVPGT
+DLERDETVRPDSTPETLAGLRTVFRRENGTVTAGNASPMNDGASAALLGSSTGADVLGLE
+PLARIAGRATAANEPDFFGYAPVEAVNRALSRAGIGWKDVAAVELNEAFAAQSLACTDAW
+GVDPEIVNAWGGAIAIGHPLGASGTRVLGTLARRLEASGERWGVAALCIGVGQGIAVVLE
+NVAAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001854.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001854.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3de2c0c6170fb76f78a5c2ee873db76101b25a2b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001854.fa
@@ -0,0 +1,14 @@
+>0_881
+MAGLNQRIISVLALPKPSLKEQREIAEHLDRETAKIDALISKAERFIELAQERRAALITA
+AVTGQIEIPTED
+>2_821
+MCSRYLGYLVLSSFFLEQVNASTYGTKMPRANWDFIKTIEVWAPDFDTQRCIADYLDRET
+ATIDALIAKQVELMNRLRERRQAVIDRAFVSTSEIVILRRHLVLNDSGAWGEDPTGADDV
+AVLRSTEQTVDGYWAISDPALRTLSQTERQNTRLREGDLIVTKTSGSFKHVGKTTLVDNE
+VAEGGYGFGNFMQRLRLKSTMIPKFLWWFMRTDQARSWINLVATTSTGLMNLNGSTLGRM
+EVPLPSLVEQREIADHLDRETAKIDALIAKAERFIELAQERRAALITAAVTGQIEIPTED
+>3_1598
+MARIVEVMTRETAKIDALIAKAERFIELAQERRAALITAAVTGQIEIPTED
+>4_1819
+MAGLNQRIISVLALPKPSLKEQREIAEHLDRETAKIDALIAKAERFIELAQERRAALITA
+AVTGQIETTSELHRRW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001855.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001855.fa
new file mode 100644
index 0000000000000000000000000000000000000000..67442f6b7e8ab367349839c48b0ac98320da6999
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001855.fa
@@ -0,0 +1,80 @@
+>0_882
+MAIHNESELETYICEYLQSHGWLYSANDEGYDRKNAIFPEDVHAWLVENQPEDYGRIVKA
+DAPASAQQAQRDQITTRLVDVLNKPQDTGVGGTLNVLRKGFKVGTSATLRMAEPRPATNL
+NPAAVASYERMRLRVMRQVHFTGAHESESVDLVLFVNGLPVATIELKTDSTQSIGHAKKQ
+YRDRNPKATPLFGFGTRAVVHFAVSNREVWMTTKLAGKDTFFLPFNQGDDGHAGNPLNPN
+GGSSTAYLWERILQRDTWLEILQKFVFLKKETVEDEYGRSRRKSTLIFPRFHQWEAVTKM
+LAAVREEGVGKSYLIEHSAGSGKTNTIAWTAHRLLSTYGVDEQRVFDSVIVVTDRTVLDD
+QLQEAVRQIERTSGTVVAVDRKNLGGEPTSKSALVKQTLLQGNRIIVVTLQTFPAVLELL
+KGDSTLAGRTYAVIADEAHSSQTGSAAAKLKRVLTPDEQADLEDGGEADTESILAAEVAA
+TGRPQNISFFAFTATPKDKTLQMFGRPSGEYDEKGQEIPASFHRYTMQQAIEEEFILDVL
+KNFTNYDTAFKLALAGQQGEFRPEGDRAAVGKPTTEVDQTEASKKLMRWVKLHPTNIAQK
+VRIIVEHFRANVAGLLDGQAKAMVVTDSRAAAVRYKRQMDQYIQDMGYTDVGTLVAFSGE
+ITDDDFGLEKVTERSMNPPVTGDLAKAFDGDGYQVMIVANKYQTGFDQPKLCALYVDKKL
+SGVLAVQTLSRLNRAAPGKDTTYVLDFVNSEDDIQAAFEPYYAGAKLETVTDPNLIHDLG
+TKLDAAGVYDWAEVDAFAEVWVVWKPGSGQEGLQAALEPVAYRFRKELAHARMNQDETRV
+NELVLVRKDMRSFVSLYDFLSQIYEFGDTEHYKRALFLRHLVQLVGDQPGGEELIDLSDV
+QLVSIRQNKTSSGDIGLTGGTALKGTTAVGGGQVHEKQRGPLEDVIEKINEIFAGEGVDA
+SPSQQEAWVSALVAPLMEDEKLLGQAGANSLEQFLASPNLERSAMGAVYANEDAFAKMTD
+IVGRGGDPSKMIVAAIGEYLYLTVRGEGAGPVDVAHGRSAVFADETAPSQGTSVDERASA
+TPSRVRKGN
+>2_822
+MAIHNESELETYICEYLERHGWLYSANDDGYDRKNAIFPEDVHAWLAENQPEDYGRLVKA
+DAPASAQQAQRDQITTRLIDVLNKPQDTGVGGTLNVLRKGFKVGTSATLRMAEPRPATNL
+NPAAVASYEHMRLRVMRQVHFNPATNQSVDLVLFVNGLPVATIELKTDSTQSIGHAKKQY
+RERNSKATPLFGFGTRAVVHFAVSNREVWMTTKLAGKDTFFLPFNQGDDGHAGNPLNPNG
+GSSTAYLWERILQRDTWLEILQKFVFLKKETVEDEYGRSRRKSTLIFPRFHQWEAVTTML
+AAVREEGAGKSYLIEHSAGSGKTNTIAWTAHRLLSTYGADEQRVFDSVIVVTDRTVLDDQ
+LQEAVRQIERTSGTVVAVDRKNLGGEATSKSALVKQTLLQGNRIIVVTLQTFPAVLELLK
+GDSTLAGRTYAVIADEAHSSQTGSAAAKLKRVLTPDEQADLEDGGEADTESILAAEVAAT
+GRPENISFFAFTATPKDKTLQMFGRPSGEYDEKGQEIPASFHRYTMQQAIEEEFILDVLK
+NFTNYDTAFKLALAGQQGEFRPEGDRAAVGKPTTEVDQTEASKKLMRWVKLHPTNIAQKV
+KIIVEHFRANVAHLLDGQAKAMVVTDSRAAAVRYKRQMDQYIHDMGYTDVGTLVAFSGEI
+TDDDFGLEKVTERSMNPSVTGDLAKAFDGDGYQVMIVANKYQTGFDQPKLCALYVDKKLS
+GVLAVQTLSRLNRAAPGKDTTYVLDFVNSENDIQAAFEPYYAGAKLETVTDPNLIHDLGT
+KLDAAGVYDWDEVDAFADVWVAWKPGSGQEGLQAALEPVAYRFRKELAHARMNHDETRVN
+ELVLVRKDMRSFVSLYDFLSQIYEFGDTEHYKRALFLRHLVQLVGDQPGGEELIDLSDVQ
+LVSIRQKKTSSGDIGLTGGAALKGTTAVGGGQAREKQRGPLEEVIEKINEIFAGEGVDAS
+PSQQEAWVSALVAPLMEDEKLLGQAGANSLEQFLASPNLERSAMGAVYANEDAFAKMTDI
+VGRGGDPSKMIVAAIGEYLYWKVRGEGAGPVDVAHGRSAVFADETAPSQGTSVDERASAT
+PSRVRKGN
+>3_1597
+MAIHNESELETYICEYLEQHDWLYSPNDAGYDRKNAIFPEDVHAWLAENQPEDYGRIVKA
+DAPASAQQAQRDQITTRLIDVLNKPQDTGVGGTLNVLRKGFKVGTSATLRMAEPRPATNL
+NPAAVASYERMRLRVMRQVHFNPATNQSVDLVLFVNGLPVATIELKTDSTQSIGHAKKQY
+RDRNPKATPLFGFGTRAVVHFAVSNREVWMTTKLAGKDTFFLPFNQGDDGHAGNPLNPNG
+SSTAYLWERILQRDTWLEILQKFVFLKKETVEDEHGRSRRKSTLIFPRFHQWEAVTTMLA
+AVREEGAGASYLIEHSAGSGKTNTIAWTAHRLLSTYGVDEQRVFDSVIVVTDRTVLDDQL
+QEAVRQIERTSGTVVAVDRKNLGGEATSKSALVKQTLLQGNRIIVVTLQTFPAVLELLKG
+DSTLAGRTYAVIADEAHSSQTGSAAAKLKRVLTPDEQADLDDGGEADTESILAAEVAATG
+RPQNISFFAFTATPKDKTLQMFGRPSGEYDEKGQEIPASFHRYTMQQAIEEEFILDVLKN
+FTNYDTAFKLALAGQQGEFRPEGDRAAVGKPTTEVDQTEASKKLMRWVKLHPTNIAQKVK
+IIVEHFRANVAGLLDGQAKAMVVTDSRAAAVRYKRQMDQYIQDMGYTDVGTLVAFSGEIT
+DDEFGLEKVTERSMNPSVTGDLAKAFDGDGYQVMIVANKYQTGFDQPKLCALYVDKKLSG
+VLAVQTLSRLNRAAPGKDTTYVLDFVNSEDDIQAAFEPYYAGAKLEAVTDPNLIHDLGTK
+LDAAGVYDWDEVDAFAEVWVAWKPGSGQEGLQAALEPVAYRFRKELAHARMNQDETRVNE
+LVLVRKDMRSFVSLYDFLSQIYEFGDTEHYKRALFLRHLVQLVGDQPGGEELIDLSDVQL
+VSIRQKKTSSGDIGLTGGAALKGTTAVGGGQVREEQRGPLEEVIEKINEIFAGEGVDASP
+SQQEAWVSALVAPLMEDEKLLGQAGANSLEQFLASPNLERSAMGAVYANEDAFAKMTDIV
+GRGGDPSKMIVAAIGEYLYWKVRSEGTGPVDVAHGRSAVFADETAPSQGTSVDERARATP
+SRVRKGS
+>4_1817
+MAIHNESELETYICEYLEQHGWLYSPNDDGYDRKNAIFPEDVHAWLAENQPEDYGRLVKA
+DAPASAQQAQREQITTRLVDVLNKPQDTGVGGTLNVLRKGFKVGTSATLRMAEPRPATNL
+NPAAVASYERMRLRVMRQVHFNPATNQSVDLVLFVNGLPVATIELKTDSTQSIGHAKKQY
+RDRNPKATPLFGFGTRAVVHFAVSNREVWMTTKLAGKDTFFLPFNQGDDGHAGNPLNPYG
+GSSTAYLWERILQRDTWLEILQKFVFLKKETVEDEHGRSRRKSTLIFPRFHQWEAVTTML
+AAVREEGAGKSYLIEHSAGSGKTNTIAWTAHRLLSTYGADEQRVFDSVIVVTDRTVLDDQ
+LQEAVRQIERTSGTVVAVDRKNLGGEATSKSALVKQTLLQGNRIIVVTLQTFPAVLELLK
+GDSTLAGRTYAVIADEAHSSQTGSAAAKLKRVLTPDEQADLEDGGEADTESILAAEVAAT
+GRPQNISFFAFTATPKDKTLQMFGRPSGEYDEKGQEIPASFHRYTMQQAIEEEFILDVLK
+NFTNYDTAFKLALAGQKGEFRPEGDRAAVGKQTTEVDQTEASKKLMRWVKLHPTNIAQKV
+KIIVEHFRANVAGLLDGQAKAMVVTDSRAAAVRYKRQMDQYIQDMGYTDVDTLVAFSGEI
+TDDEFGLEKVTERSMNPSVTGDLAKAFDGDGYQVMIVANKYQTGFDQPKLCALYVDKKLS
+GVLAVQTLSRLNRAAPGKDTTYVLDFVNSEDDIQAAFEPYYAGAKLETVTDPNLIHDLGT
+KLDAAGVYNGDEVDVFADVWVAWKPGSGQEGLQAALEPVAYRFRKELAHARMNQDETRVN
+ELVLVRKDMRSFVSLYDFLSQIYEFGDTEHYKRALFLRHLVQLVGDQPGGEELIDLSDVQ
+LVSIRQKKTSSGEIGLTGGAALKGTTAVGGGQVREKQRGPLEEVIEKINEIFAGEGVDAS
+PSQQEAWVSALVAPLMEDEKLLGQAGANSLEQFLASPNLERSAMGAVYANEDAFVKMTDI
+VGRGGDPSKMIVAAIGEYLYWKVRSEGAGPVDVAHGRSAVFVDETAPSQGTSVDERASAT
+PSRVRKGN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001861.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001861.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7772cf099aee06dd4471922d38f59b01beaf81af
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001861.fa
@@ -0,0 +1,88 @@
+>0_909
+MTPTFSAQDHDDLDRVLTATGGIPDPADLQHLADDAVAQVRRWLADARGHEADFAAQQLA
+GALKEPGGLDFIVRFVDHVVRPEDPAIAARALRELAQQAPGFLPPALRAVFGVGGRAAPL
+VPRVAVPVARRVLRRMVSHLIVDARDRQLGEAIAALRDERTRLNVNLLGEAILGKGEADR
+RLEGIAGLIRRDDVDYVSVKVSAATAPHAPYAFDEAVADITERLTPLYELARDNGTFINL
+DMEEYHDLDLTLNVFTGLLEQPGLRDYEAGIVLQAYLPDALAAMVRLQEWAARRVAAGGA
+PVKVRVVKGANLPMELMQASLMGWPVATVASKQEADTNYKRVLNYALTPEHLRHVRIGVA
+GHNLFDVALAHRLMDRRGLGPEQVEFEMLLGMATGQAAAVKADVGSLLLYTPVVRPEEFD
+VAISYLVRRLEEGASPENFMSAVFDLDADEALFAREEERFRASLAHLDAEVPRPSRGQDR
+SRGEDGVRPAAVDGFANTPDTDPSLPGNRAWARGILEAIPGSALGAERARAHRVGTAEAA
+RAAIADTQAPGAAWGALTGAQRAEALDAVGRALHAGRGRLLEVAAAETGKTLDQGDPEIS
+EAVDFAHYYARLARGLDEVEGARAVPVRLTLVIPPWNFPVAIPVGGVLAALGAGSPVVFK
+AAPQSERTGAVAWELIVQGLRDSGLFDDGGPLAAHDPADLVRLVTMADEDEEEVGTALVT
+DPAVERLILTGGWDTAKLFKGMRPDLHLLAETSGKNAVIVTPSADLDLATKDVVHSAFGH
+AGQKCSASSLVVLVGSVATSERFHRQLLDAASSLHVAHPADPRAQMGPVIEEPGEKLRRG
+LTELGEGERWALRPRELDATGRLWSPGIRSGVRPGADAHLTEYFGPVLSVMTAATLNEAI
+DIVNAVDFGLTSGLHSLDPDEIAHWLERVHAGNLYVNRGITGAIVRRQPFGGWKRSVVGP
+TTKAGGPHYLHGLVDWVDAPSSTSESPAADRAGEGTAAGTPAAAERSWLDAARALDERAW
+AATFGSGTDVSALAAERNVLRHLPVPVLVRRASGPAEHLLRVVSAGLRAGAPMTVSIAPT
+PAAQAPGTDDLSAEALRGQVDELVRTAGAGRAEGAAPVSVVVEDAAAFHDRARQLAQIPP
+AAEGGGDARIRLVADWAQDREGARAAGAALHAALGDTPDVAVYAGPVVSAGEVELLPFLH
+EQALSVTAHRFGTPDHLTDAIL
+>1_1871
+MTAMFSAQDHDDLDRVLSATGGIPDPADLHALADDAVAQVRRWLAESRDHEADFAARQLA
+GALKEPGGLDFIVRFVDHVVRPEDPAIAARALRELAGRAPGFLPPALRAVLGVGGRAAPL
+VPRIAVPTARRVLRHMVSHLIVDARDRQLGKAIAALRDEHTRLNINLLGEAILGQGEADR
+RLEGIAALIRRDDVDYVSVKVSAATAPHAPYAFDEAVADITERLTPLFELARDRDTFINL
+DMEEYRDLDLTLNVFTALLEQPGLRDYEAGIVLQAYLPDALAAMVRLQEWAARRVAAGGA
+PVKVRVVKGANLPMERMQASLTGWPLATVGSKQEADTNYKRVLNYALTPEHLAHVRIGVA
+GHNLFDVALAHRLIERRGLDPAAVEFEMLLGMATGQAAAVRADVGALLLYTPVVRPEEFD
+VAISYLVRRLEEGASPENFMSAVFDLDADADLFAREEERFRASLRHLDAAVPRPNRLQDR
+SRGEDGPTPAPVDGFANTPDTDPALPGNREWARRILAAVPGSDLGTDTVRAHRATTADDA
+RAAIAATAHPGARWGALTGHERADALDAVGRALHAGRARLLEVAAAETGKTLDQGDPEVS
+EAVDFAHYYARLARGLDAVEGARAVPVRLTLVIPPWNFPVAIPVGGVLAALGAGSPVVFK
+PAPQSERTGAVAWELIVAGLRDSGLFDDGGPLAGHDPADLVRLVTLADEDEAEVGAALVT
+DPAVERLILTGSWDTARLFKGMRPDLHLLAETSGKNAVIVTPSADLDLATKDVVQSAFGH
+AGQKCSASSLVVLVGSVGTSERFHRQLLDAASSLHVAHPVDPRAEMGPVIEAPGEKLRRG
+LTELGPGERWALRPRQLDETGRLWSPGIRSGVRPGADAHLTEYFGPVLAVMTAETLEEAI
+GIVNAVDYGLTSGLHSLDREEIDVWLRGVRAGNLYVNRGITGAIVRRQPFGGWKRSVVGP
+TTKAGGPHYLHGLVDWEDAPTWAGGEGRPGAEADGAGASWLETARALDTHAWTTVFGVAT
+DVSALEAERNVLRHVPTPVLVRRHSGPADHLLRIVSAGLRAGAPMTVSLRPTPTAEGPDA
+DGLSAEAVRGRVEKLVRSARTEGAGTAAPVDVVVEDDAAFHDRARRLALILPATEGGGDA
+RIRLVADWTGDREAAEAARSALHAALGDTPDVAVYAGPVVSAGEVELLPFLHEQAVSVTA
+HRFGTPDHLTEGVL
+>3_1578
+MTATFSAQDHDDLDRVLGVTGGIPDPADLHALADDAVAQVRRWLAESRDHEADFAARQLA
+GALKEPGGLDFIVRFVDHVVRPEDPAIAARALRELAGRAPGFLPPALRAVLGVGGRAAPL
+VPRIAVPTARRVLRRMVSHLIVDARDRQLGKAIAALRDEHTRLNINLLGEAILGQGEADR
+RLEGIAALIRRDDVDYVSVKVSAATAPHAPYAFDEAVADITERLTPLFELARDRDTFINL
+DMEEYRDLDLTLNVFTALLEQPGLRDYEAGIVLQAYLPDALAAMVRLQEWAARRVAAGGA
+PVKVRVVKGANLPMERMQASVTGWPLATVGSKQEADTNYKRVLNYALTPEHLAHVRIGVA
+GHNLFDVALAHRLIERRGLDPAAVEFEMLLGMATGQAAAVRADVGALLLYTPVVRPEEFD
+VAISYLVRRLEEGASPENFMSAVFDLDADADLFAREEERFRASLRHLDAAVPRPNRLQDR
+SRGEDGPTPAPVDGFANTPDTDPALPGNREWARRILAAVPGSDLGTDTVRAHRATTADDA
+RAAIAATADPGARWGALTGHERADALDAVGRALHAGRARLLEVAAAETGKTLDQGDPEVS
+EAVDFAHYYARLARGLDAVEGARAVPVRLTLVIPPWNFPVAIPVGGVLAALGAGSPVVFK
+PAPQSERTGAVAWELIVAGLRDSGLFDDRGPLAGHDPADLVRLVTLADEDEAEVGAALVT
+DPAVERLILTGSWDTARLFKGMRPDLHLLAETSGKNAVIVTPSADLDLATKDVVQSAFGH
+AGQKCSASSLVVLVGSVGTSERFHRQLLDAASSLHVAHPADPRAEMGPVIEAPGEKLRRG
+LTELGPGERWALRPRQLDETGRLWSPGIRSGVRPGADAHLTEYFGPVLAVMTAETLEEAI
+GIVNAVDYGLTSGLHSLDREEIDVWLRGVRAGNLYVNRGITGAIVRRQPFGGWKRSVVGP
+TTKAGGPHYLHGLVDWEDAPTWAGGEGRPGSEADGAGASWLETARALDTQAWTTVFGVAT
+DVSALEAERNVLRHVPTPVLVRRHSGPADHLLRIVSAGLRAGAPMTVSLRPTPTAEGPDA
+DGLSAEAVRGRVEELVRSARTEGAGTAAPVDVVVEDDAAFHDRARRLALVPPAAEGGGDA
+RIRLVADWTGDREAAEAARSALHAALGDTPDVAVYAGPVVSAGEVELLPFLHEQAVSVTA
+HRFGTPDHLTEGVL
+>4_1791
+MTATFSAQDHDDLDRVLGATGGIPDPADLHALADDAVAQVRRWLAESRDHEADFAARQLA
+GALKEPGGLDFIVRFVDHVVRPEDPAIAARALRELAGRAPGFLPPALRAVLGVGGRAAPL
+VPRIAVPTARRVLRHMVSHLIVDARDRQLGKAIAALRDEHTRLNINLLGEAILGQGEADR
+RLEGIAALIRRDDVDYVSVKVSAATAPHAPYAFDEAVADITERLTPLFELARDRDTFINL
+DMEEYRDLDLTLNVFTALLEQPGLRDYEAGIVLQAYLPDALAAMVRLQEWAARRVAAGGA
+PVKVRVVKGANLPMERMQASLTGWPLATVGSKQEADTNYKRVLNYALTLQHLAHVRIGVA
+GHNLFDVALAHRLIERRGLDPAAVEFEMLLGMATGQAAAVRADVGALLLYTPVVRPEEFD
+VAISYLVRRLEEGASPENFMSAVFDLDADAGLFAREEERFRASLRHLDAAVPRPNRLQDR
+SRGEDGPTPAPVDGFANTPDTDPALPGNREWARRILAAVPGSDLGTDTVRAHRATTADDA
+RAAIAATADPGARWGSLTGHERADALDAVGRALHAGRARLLEVAAAETGKTLDQGDPEVS
+EAVDFAHYYARLARGLDAVEGARAVPVRLTLVIPPWNFPVAIPVGGVLAALGAGSPVVFK
+PAPQSERTGAVAWELIVAGLRDSGLFDDRGPLAGHDPADLVRLVTLADEDEAEVGAALVT
+DPAVERLILTGSWDTARLFKGMRPDLHLLAETSGKNAVIVTPSADLDLATKDVVQSAFGH
+AGQKCSASSLVVLVGSVGTSERFHRQLLDAASSLHVAHPADPRAEMGPVIEAPGEKLRRG
+LTELGPGERWALRPRQLDETGRLWSPGIRSGVRPGADAHLTEYFGPVLAVMTAETLEEAI
+GIVNAVDYGLTSGLHSLDREEIDVWLRGVRAGNLYVNRGITGAIVRRQPFGGWKRSVVGP
+TTKAGGPHYLHGLVDWEDAPTWAGGEGRPGSVADGAGASWLETARALDTHAWTTVFGVAT
+DVSALEAERNVLRHVPTPVLVRRHSGPADHLLRIVSAGLRAGAPMTVSLRPTPTAEGPDA
+DGLSAEAVRGRVEELVRSARTEGAGTAAPVDVVVEDDAAFHDRARRLALIPPATEGGGDA
+RIRLVADWTGDREAAEAARSALHAALGDTPDVAVYAGPVVSAGEVELLPFLHEQAVSVTA
+HRFGTPDHLTEGVL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001865.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001865.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e5a0a9f98ffe16caf65b2f27ee43d8c4a2492a73
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001865.fa
@@ -0,0 +1,33 @@
+>0_945
+MFYNVVGGNVRAIDGPTTYSAFPANVSAKLPPADPDGVAREVSAMIRAADIPEWARRSFA
+GTVVMDANDIGRNALGRDTAASAAVLEAAFADNPLGQGRERTPLAVVVRMD
+>1_1833
+MRDTTADAAQVPARPDDAAVYRYLAFGEADRPFLVGGPRPAPPAPAATPSPVADLESVRA
+AIRAHGGPLASTAHVCGRPAPTPSAADASRGLRGAARTLTATRRDVAARLADSRERADVP
+VEALLNSAFVDAHADERPADRGVPRGRLAGLVDAVLPPARPAGDDAAAGLLLALREPVRE
+VFASDSFAARPYADAPTVRALFEDFLAHPRRHDPERFWRLLNLELWLRDAVDADAAPAGP
+ATAVDEAPTAPAPVKPDHEPNPGKELDLVSAEDGRRYRRFPVQTGLVDRDTDLQAYLRGE
+IEDFFRDLPADAMPQDAPWHFSVSEKIVAITQGRSYYTWEVRPSVAARVLSRLVTRTPAG
+IGLGDPTTMQLAIQEAGLPRIVLSAAAGAAGKVAGKRGVFYNVVGGNVRAIDGPTTYSTF
+PANVSAKLPPAEPDRVAAEVSAMIRAADIPAWAKASFAGTVVMDANDIGRNALGKDTAAS
+AAVLEAAFADNPLGQGRERTPLAVVVRMD
+>3_1540
+MRDTTADAAQVPARPDDAAVYRYLAFGEADRPFLVGGPRPAPLAPAATPSPVADLESVRA
+AIRAHGGPLASTAHVCGRPAPTPSAADASRGLRGAARTLTATRRDVAARLADSRERADVP
+VEALLNSAFVDAHADERPADRGVPRWRLAGLVDAVLPPARPADDDAAAGLLLALREPVRE
+VFASDSFAARPYADAPTVRALFEDFLAHPRRHDPERFWRLLNLELWLRDAVDPDAAPASP
+AAAVDEAAGAPAPAKPDHEPNPGKELDLVSAEDGRRYRRFPVQTGLVDRDTDLQAYLRGE
+IEDFFRDLPAEAMPQDAPWHFSVSEKIVAITQGRSYYTWEVRPSVAARALSRLVTRTPAG
+IGLGDPTTMQLAIQEAGLPRIVLAAAAGAAGKVAGKRGVFYNVVGGNVRAIDGPTTYSTF
+PANVSAKLPPAEPDRVAAEVSAMIRAADIPAWAKASFAGTVVMDANDIGRNALGKDTAAS
+AAVLEAAFADNPLGQGRERTPLAVVVRMD
+>4_1754
+MRDTTADAAQVPARPDDAAVYRYLAFGEADRPFLVGGPRPAPLAPAATPSPVADLESVRA
+AIRAHGGPLASTAHVCGRPAPTPSAADAPRGLRGAARTLTATRRDVAARLADSRERADVP
+VEALLNSAFVDAHADERPADRGVPRGRLAGLVDAVLPPARHADDDAAAGLLLALREPVRE
+VFASDSFAARPYADAPTVRALFEDFLAHPRRHDPERFWRLLNLELWLRDAVDADAAPAGP
+ATAVDEAPTAPAPAKPDHEPNPGKELDLVSAEDGRRYRRFPVQTGLVDRDTDLQAYLRGE
+IEDFFRDLPADAMPQDAPWHFSVSEKIVAITQGRSYYTWEVRPSVAARALSRLVTRTPAG
+IGLGDPTTMQLAIQEAGLPRIVLSAAAGAAGKVAGKRGVFYNVVGGNVRAIDGPTTYSTF
+PANVSAKLPPAEPDRVAAEVSAMIRAADIPAWAKASFAGTVVMDANDIGRNALGKDTAAS
+AAVLEAAFADNPLGQGRERTPLAVVVRMD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001866.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001866.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ef4683004ddd8b8044db04dabf651bbeef40ff90
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001866.fa
@@ -0,0 +1,16 @@
+>0_959
+MTPQPAAAPAEHVAVVHALRAFSEGAEHAVDEAGRGIGLHRTDLKALAHLMRCADEDRPV
+TATDLGAHLHLTRAATTAVVDRLVASGHARRRRDDVDRRRVLVEHTDSARRDGAAAFLPM
+SLRISGALTPFTAEELRAALRVIEAATAALQAPPDAPAAPVPG
+>1_1820
+MIKQPWGLARLPAMTTQPPSAPAEHLAVVHALRVFSESAEHAVDEAGRGVGLHRTDLRAL
+AYLMARAAAGEPVTASDLGAHLHLTRASATALVDRLAAAGHVRRHRDEGDRRRVLVEHTD
+TARRDGQRAFEPMSQRLSAALEGFSAAELRAAVRVLEAATAALTDPAPEDP
+>3_1527
+MIKQPWGLARLPAMTTQPPSAPAEHLAVVHALRVFSESAEHAVDEAGRGVGLHRTDLRAL
+AYLMARAAAGEPVTASDLGAHLHLTRASATALVDRLAAAGHVRRHRDEGDRRRVLVEHTD
+TARRDGQRAFEPMSQRLSAALEGFSAAELRAAVRVLEAATAALTDPAPEDP
+>4_1741
+MTTQPPSAPAEHLAVVHALRVFSESAEHAVDEAGRGVGLHRTDLRALAYLMARAAAGEPV
+TASDLGAHLHLTRASATALVDRLAAAGHVRRRRDEGDRRRVLVEHTDTARRDGQRAFQPM
+SQRLSAALEGFSVAELRAAVRVLEAATAALTDPTPEDP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001867.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001867.fa
new file mode 100644
index 0000000000000000000000000000000000000000..35d4eb0a037c3c51f083e8eb5d660de8a2a70594
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001867.fa
@@ -0,0 +1,57 @@
+>0_960
+MRTPPDLSALRSPDARRAAGSADPDSAAGRPEGLGASAAGRDGERTDGRTGDRTGERTAG
+RPSAWLRFGLAAALFVVWFAVMGLGGPTFGKIGDVSSNDQSTFLPASAESTRAGEEAAAF
+RDGEAVPAVIVAEADLSDPAQAFPALGGLAETLRGVDGVTDVAGPIPAEDGEAVQFLAFV
+DSSDGAEREVADVVEDLKGILADPAAADADLADTVAADADWHLGGPAGLATELGGAFAGI
+DGLLLLVALVVVFVILVIVYRSVLLPILVLLTAVGALCAAILAVYGMAVAGWIQLNGQAQ
+GILSILVIGAATDYCLLLVARHREELLVREEVTASLLAAVRGSFGAITASASTVALALLI
+LLVSDLNSNSSLGPIAATGILFAWLAALTLLPALLQLAGRAAFWPTVPSPENARRRATRR
+AERGRAFVQPEDAAGRPLAGLEEDHGVWTKVGAAVARRPRPVWLATLAVLLVMSAGLLQL
+QASGVAQEDVLLGESDSRQAQALLTEHFDAGSGAPAQIVAPAEDADAVLAAVEADPGVAE
+ASVTTDEAPAPAGPPPGVTGGGEGTPAEGGAGRPEAAPQPDPEPKVVDGTVLISATLADP
+GESLAAQATVERLRAELADVGSGGEVLVGGPAAQALDTNTTSQRDLVVVIPLILAMLLVI
+LSMLLRSILAPVLLVAATVISFGAAMGVSALVFRHVFGFENADPTVPLYGFVFLVALGID
+YTIFLMTRAREETPRHGTRAGVLRALTVTGGVITSAGVVLAATFAALAVIPLMFMLQLAF
+IVAFGVLLDTLVVRTLLIPALVRDIGPKVWWPARAE
+>1_1819
+MPTPPDLSAFRTPAATGRPPRGLRLGLAAALAVVWFAVLGLGGPVFGRIGDVSSNDQATF
+LPASAESTRAGQEAAAFQDGEAVPAVVVGPASTADPAAAFPALADLAGRLGEVPGVTDVA
+GPIPSDDGAAVQFLAFVDSSAGAERPVADVVADLREVVADPAAADPALAGTVAADTEWHV
+GGPAGLVAELGGAFAGIDGLLLLVALAVVFVILVAVYRSVLLPVLVLLTAVAALCGAIVA
+VYGMALAGWIQLNGQAQGILSILVIGAATDYCLLLVARHREELLVRADVGEALRAAVRGS
+FGAITASASTVALALLILMASDLNSTRSLGPVAATGVAFAWLAALTLLPALLRLTGRAAF
+WPTIPSPERARRRAQRRAARGRAFTPPLDGAGRPVAGLEEDHGVWTRVGAVVARRPRLVW
+VATTVVLLALCGGLLQLRADGVAQEDVLLGDSDARQAQALLSEHFDAGAGAPAQILAPAG
+DAEAVLAAVAEDPGVAEAEVTTDAPEAAAGPPPGVTDAEGGAGAASAPEPQPRVVDGRVL
+VSATLADPGESLAAQQTVARLRDRLADLPATGEILVGGPAAQALDTNVTTQRDLRVVIPL
+ILAMLLVILAVLLRSLLAPVLLVAATVVSFGAALGVSALVFRHVFGFEDADPTVPLYGFV
+FLVALGIDYTIFLMTRAREETPRHGTRAGVLRALTVTGGVITSAGVVLAATFAALAVIPL
+MFMVQLAFIVAFGVLLDTLIVRSLLIPALVRDIGPKVWWPAKVD
+>3_1526
+MPTPPDLSAFRTPAATGRPPRGLRLGLAAALTVVWFAVLGLGGPVFGRIGDVSSNDQATF
+LPASAESTRAGQEAAAFQDGEAVPAVVVGPASTADPAAAFPALADLAGRLGEVPGVTDVA
+GPIPSDDGAAVQFLAFVDSSAGAERPVADVVADLREVVADPAAADPALAGTVAADTEWHV
+GGPAGLVAELGGAFAGIDGLLLLVALAVVFVILVAVYRSVLLPVLVLLTAVAALCGAIVA
+VYGMALAGWIQLNGQAQGILSILVIGAATDYCLLLVARHREELLVRADVGEALRAAVRGS
+FGAITASASTVALALLILMASDLNSTRSLGPVAATGVAFAWLAALTLLPALLRLTGRAAF
+WPTIPSPERARRRAERRAARGRAFTPPRDGAGRPVAGLEEDHGVWTRVGAVVARRPRLVW
+VATTVVLLALCGGLLQLRADGVAQEDVLLGDSDARQAQALLSEHFDAGAGAPAQILAPAE
+DAEAVLAAVAEDPGVAEAEVTTDAPEAAAGPPPGALDAEGGAGAASAPEPQPRVVDGRVL
+VSATLADPGESLAAQQTVARLRDRLADLPTSGEILVGGPAAQALDTNVTTQRDLRVVIPL
+ILAMLLVVLAVLLRSLLAPVLLVAATVVSFGAALGVSALVFRHVFGFEDADPTVPLYGFV
+FLVALGIDYTIFLMTRAREETPRHGTRAGVLRALTVTGGVITSAGVVLAATFAALAVIPL
+MFMVQLAFIVAFGVLLDTLVVRTLLIPALVRDIGPKVWWPAKVD
+>4_1740
+MPTAPDLSAFRTPAAPGRPSRGLRLGLAAALAVVWFAVLGLGGPVFGAIGDVSSNDQATF
+LPASAESTRAGEEAAAFQDGEAVPAVVVGPASTADPAAAFPALADLAGLLGEVPGVVDVA
+GPIPSEDGAAVQFLAFVDSSAGAERPVADVVADLREVVADPAAAAPALAGTVAADTEWHV
+GGPAGLVAELGGAFAGIDGLLLLVALVVVFVILVAVYRSVLLPVLVLLTAVAALCGAIVA
+VYGMALAGWIQLNGQAQGILSILVIGAATDYCLLLVARHREELLVRAEVGEALRAAVRGS
+FGAITASASTVALALLILMASDLNSTRSLGPVAATGVAFAWLAALTLLPALLRLTGRAAF
+WPTIPSPERARRRTERRAARGRAFTPPRDGAGRPIAGLEEDHGVWTRVGTVVARRPRPVW
+VATTVGLLALCGGLLQLRADGVAQEDVLLGDSDARQAQALLSEHFDAGAGAPAQILAPAG
+DAEAVLAAVAEDPGVAEAEVTADAPEAAAGPPPGVTDAEGGAGAASAPEPQPRVVDGRVL
+VSATLADPGESLAAQQTVARLRDRLADLPTSGEILVGGPAAQALDTNVTTQRDLRVVIPL
+ILAMLLVILAVLLRSLLAPVLLVAATVVSFGAALGVSALVFRHVFGFEDADPTVPLYGFV
+FLVALGIDYTIFLMTRAREETPRHGTRAGVLRALTVTGGVITSAGVVLAATFAALAVIPL
+MFMVQLAFIVAFGVLLDTLVVRTLLIPALVWDIGPKVWWPAKAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001875.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001875.fa
new file mode 100644
index 0000000000000000000000000000000000000000..34a25264dc1cffb0f19ab3cd65c1fe912174dedf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001875.fa
@@ -0,0 +1,16 @@
+>0_1200
+MTGHEHPRPEPLSAAVDEQMLEDFLNQHLLGSRSGVKAFRAAEQTWAGTPQEDALRRLGD
+AVQDDQERLEALIGELGLRTPLVDRAAGAAAEVGGRLNPVNALRTRGSGWTQIELDLLQG
+MLQAKAAMWHVLEALAPHEPVLDAGEMAALYERAQDQQRAVQRIAEDTLLERFLR
+>1_1615
+MTGHDHPRPESISAAVDEQMLADFLNQHLLGSRSGVKAFRAAEQTWAGTPQEAALRRLGD
+AVQDDQDRLEALIGELGLRTPLVDRAAGAAAEVGGRLNPVNALRTRGSGWTQIELDLLQG
+MLQAKSAMWDVLEQLAPHLPAVDAAEMQALRQRTADQQREVQRITSATLEGRFLAG
+>3_1330
+MTGHEHPRPESTSAAVDEQMLEDFPNQHLLGSRSGVKAFRAAEQTWAGTPQEAALRRLGD
+AVQDDQDRLEALIGELGLRTPLVDRAAGAAAEVGGRLNPVNALRTRGSGWTQIELDLLQG
+MLQAKSAMWHVLEQLAPHLPAVDAAEMQALRQRAADQQREVQRITSATLEGRFLAG
+>4_1545
+MTGHEHPRPESTSAAVDEQMLADFLNQHLLGSRSGVKAFRAAEQTWAGTPQEAALRRLGD
+AVQDDQDRLEALIGELGLRTPLVDRAAGAAAEVGGRLNPVNALRTRGSGWTQIELDLLQG
+MLQAKSAMWHVLEQLAPHLPAVDAAEMHALRQRTGDQQREVQRITSATLEGRFLAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001877.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001877.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3eb48c42034e1fbe04583c084fa10405e045cbfe
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001877.fa
@@ -0,0 +1,19 @@
+>0_1299
+MAVEEQRLALPVDGELPEGFAVQGLRIASGVLPRREEAAVTVRVLD
+>2_419
+MSPLMTVGEFALATGLSAKALRFYDERGLLAPADVDAHSGYRRYEPGQIRTAAQIRVLRA
+AGLTVDDVRSVLADPASLPARLEAHAAEVRRRRDLEDRALALAAAGVYAAPDPDDDGGPA
+RPGPVAERTVGPTPWAGVVQRVALDEAGEEATTERANAAFATLFQALAEAGSAPAGPPWT
+ALRPVPSAADVVETVLAVPLSGPAPAGLRVDGHEVVTGTLPRRVERYVDVRADAGEVDLL
+DDAPGGALPHPGLLGLMDAFDVEDAGTAPEIRQILADPEAGHVELAVTVREEAGAGQG
+>3_1900
+MSPLMTVGEFALATGLSAKALRFYDERGLLAPADVDAHSGYRCYAPGQIRTAAQIRVLRA
+AGLTVDDVRSVLADPASLPARLETHAAELRRRRDLEDRALALAVAGVYAAPDPDDDGGPA
+RPGPVAERTVGPTPWAGVVQRVALDEAGEESTTERANAAFVTLFQALAEAGSAPAGPLWT
+ALRPVPGAADVVETVLAVPLSGPAPAGLRVDGHEVVAGTLPRRVERYVDVRADTGEVDLL
+DDAPGGALPHPDLLGLMDAFDMEDAGAAPEIRQILADPEAGHIELAVTVREEAGAGQG
+>4_2120
+MSPLMTVGEFALATGLSAKAHAAELRRRRDLEDRALALAVAGVYAAPDPDDDGGPARPGP
+VAERTVGPTPWAGVVQRVALDEAGEESTTERANAAFATLFQALAEAGSAPAGPLWTALRP
+VPGAADVVETVLAVPLSGPAPAGLRVDGHEVVAGTLPRRVERYVDVRADTGEVDLLDDAP
+GGALPHPDLLGLMDAFDMEDAGAAPEIRQILADPEAGHIELAVTVREEAGAGQG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001886.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001886.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ec012789de99c72eb315710dc1ac37a1845aae77
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001886.fa
@@ -0,0 +1,18 @@
+>0_1703
+MNALSLNPRGGAEHLARHAGLVAALRERPVVVETEAAGDRAALRAANELGLRRVGRELRF
+LVR
+>1_1109
+MPVGAATLRELPLVGETSPELAALVDRAHREARALNRLLGVHPLALGTVAPADVLGADAT
+AALRTGLAAGLGVAPTAWEDPGVVLAPAADADPELLHVVLLHTTAVVAGPPALVARLADA
+DVSDLLDDASLGAHLRGPVEDVSAAWLHAADRQALSLDPDGGAAHVARHAELTAVLETRP
+VVVERVGMRDRDAQRAADAVGLRRVGRERVLRVAAP
+>3_837
+MPVGAATLRELPLVGETSPELAALVDRAHREARALNRLLGVHPLALGTVAPADVLGADAT
+AALRTGLAAGLGVAPTAWEDPGVVLAPAADADPELLHVVLLHTTAVVAGPPALVARLADA
+DVSDLLDDASLGAHLRGPVEDVSAAWLHAADRQALSLDPDGGAAHVARHAELTAVLETRP
+VVVERVGMRDRDAQRAADAVGLRRVGRERVLRVAAP
+>4_1059
+MPVGAATLRELPLVGETSPELAALVDRAHREARALNRLLGVHPLALGTVAPADVLGADAT
+AALRTGLAAGLGVAPTAWEDPGVVLAPAADADPELLHVVLLHTTAVVAGPPALVARLADA
+DVSDLLDDASLGAHLRGPVEDVSAAWLHAADRQALSLDPDGGAAHVARHAELTAVLETRP
+VVVERVGMRDRDAQRAADAVGLRRVGRERVLRVAAP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001889.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001889.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1ead7256d6da45013001aa2f9fa51d3f0eb58d0e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001889.fa
@@ -0,0 +1,20 @@
+>0_1839
+MDETPEPPRTRRRRGRPLSPALSREAIADAALAVARTEGYEGLTMAAVGRRLGVAPSALY
+NHISGKHELLVLLQDAVMGEVSLVELEAAIRGEAPVVAALRAWARSYRDVFAAHPPLIPL
+IATLPIEGAPSTQRVYETVCAVLARTGLAPGQVLARVIALESFIYGSAYDVDAPADIFEV
+AGAQERLPAFGAAAEAFREGGGTRATGARNPYADAPFEEGLDLLLAGLDD
+>1_972
+MDETTEPPRARRRRGRPLSPALSREAIADAALAVARTEGYEGLTMAAVGRRLGVAPSALY
+NHISGKHELLVLLQDAVMGEVSLVELEAAIRGEVPVVAALRAWARSYRDVFAAHPPLIPL
+IATLPIEGAPSTQRVYETVCAVLARTGLAPEQVLARVIALESFIYGSAYDVDAPADIFEV
+AGAQERLPALGAAAEAFRAGGGTRATGARNPYADAPFEEGLDLLLAGLGD
+>3_695
+MAAVGRRLGVAPSALYNHISGKHELLVLLQDAVMGEVSLVELEAAIRGEVPVVAALRAWA
+RSYRDVFAAHPPLIPLIATLPIEGAPSTQRVYETVCAVLARTGLAPEQVLARVIALESFI
+YGSAYDVDAPADIFEVAGAQERLPALGAAAEAFRAGGGTRATGARNPYADAPFEEGLDLL
+LAGLGD
+>4_915
+MDETTEPPRARRRRGRPLSPALSREAIADAALAVARTEGYEGLTMAAVGRRLGVAPSALY
+NHISGKHELLVLLQDAVMGEVSLVELEAAIRGEVPVVAALRAWARSYRDVFAAHPPLIPL
+IATLPIEGAPSTQRVYETVCAVLARTGLAPEQVLARVIALESFIYGSAYDVDAPADIFEV
+AGAQERLPALGAAAEAFRAGGGTRATGARNPYADAPFEEGLDLLLAGLGD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001891.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001891.fa
new file mode 100644
index 0000000000000000000000000000000000000000..181a0a0f04bb5d21c08ddcd7c1ccaea622fe2254
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001891.fa
@@ -0,0 +1,52 @@
+>0_1949
+MSTAETTRTGERRGRTGPRLPHRWRRPALAGLLIVLSLILAPEQVAQGTAHPVAAALMLA
+AAVVAGAGIVRSAVAALRVKTIGIDLLVATAAIGATLLGNFWEAAAVTFLFALGHALEDA
+TLAKTRSALGDLVATAPETAVVLEADGTQRTVAAHEVPAGATVLVKAGARVPVDGVVLTG
+TGAVDEASITGESLPAEKSDGDDVYAGTVATAGLLHVQARGVGADTTLARIIHRVEEAQE
+ARARTQQFMDRFSRWYTPAIMVLALVTGLITRDVPLALTLLVIGCPGALVISIPVAIVAG
+IGRGAKDGVLIKGGEFLERSAKVDAVAVDKTGTLTSGTPELTDVVALEDGREDEVLGWAA
+RLEAASDHPLAAPIVAAGRDRGLLSGAMATDVDVVLGRGLTGTVEGRTVAVGNVALLRES
+GADADRTARVEAVAAELAAAGRTPMAVAVDDVPVGVLAVADTVRPEAAGMIRELHRIGVR
+EVVMLTGDQPGVAHAVARQVGVDRVRAGLLPEDKLDAITAMQAEGRVVAMVGDGVNDAPA
+LASADIGVAMGAAGSGVAIETADIALMGDRLELLPQALGLAQRTVGVMRQNIAVSLVTVA
+ALLAGVFAGGVTMSIGMLVHEASVLLVIANAMRLLRPAAGSGRGGSRAAQSRSTTSNSSS
+SAPVATGAGRPSDSAA
+>1_912
+MSTPAVTRPGRPRARFALSRRWRRPVVAGLLIAVSLVLAPEQLAHGTGHLVAAGLMLAAA
+VVAGLPIARDAIAALRVKTVGIDLLVATAAIGASLLGNFWEAAAVTFLFALGHALEDATL
+SQTRSALADLVSTAPETAVVVDADGTQRTVPAHEVAPGATVLVKAGARVPVDGVVLTGVG
+AVDEASITGESIPAEKTDGDAMYAGTVATAGLLQVQARGVGADTTLARIIHRVEAAQEAR
+ARTQQFMDRFSRWYTPAIMVLAFATGLITRDVPLALTLLVIGCPGALVISIPVAIVAGIG
+RGAKDGVLIKGGEFLERSAKVDAVAVDKTGTLTSGTPELTDVVAFEPGAEDEVLRWAARL
+EAASDHPLAAPIVAAGRDRGLLDGPLATDVDVVLGRGLTGEVDGRVVAVGNVAMLRERGV
+DPAATDRVETVAAELAEAGRTPAAVVVDGIPLGVLAIADTLRPEAAGMIRALHGIGVREV
+VMLTGDHPGVAQAVARQVGVDDVRAGLLPQDKLEAIEALQAEGRVVAMVGDGVNDAPALA
+TADIGVAMGAAGSGVAIETADIALMGDRLERLPQALDLARRTVRVMRQNIAISLVTVVAL
+LAGVFAGGVTMAVGMLVHEASVLLVIVNAMRLLRRPGQPRSTTSNSSRSAPVATGAGRPP
+CSAA
+>3_640
+MSTLAVTRPGRTRARFTLSRRWRRPVVAGLLIAVSLVLAPEQLAHGTGHLVAAGLMLAAA
+VVAGLPIARDAIAALRVKTVGIDLLVATAAIGASLLGNFWEAAAVTFLFALGHALEDATL
+SQTRSALADLVSTAPETAVVVDADGTQRTVPAHEVAPGATVLVKAGARVPVDGVVLTGVG
+AVDEASITGESIPAEKTDGDAVYAGTVATAGLLQVEARGVGADTTLARIIHRVEAAQEAR
+ARTQRFMDRFSRWYTPAIMVLAFATGLITRDVPLALTLLVIGCPGALVISIPVAIVAGIG
+RGAKDGVLIKGGEFLERSAKVDAVAVDKTGTLTSGTPELTDVVAFEPGAEDEVLRWAARL
+EAASDHPLAAPVVAAGRDRGLLDGPLATDVDVVLGRGLTGEVDGRVVAVGNVAMLRERGV
+DPAATDRVETVAAELAEAGRTPAAVVVDGIPLGVLAIADTLRPEAAGMIRALHGIGVREV
+VMLTGDQPGVAQAVARQVGVDHVRAGLLPQDKLEAIEALQAEGRVVAMVGDGVNDAPALA
+TADIGVAMGAAGSGVAIETADIALMGDRLERLPQALDLARRTVRVMRQNIAISLVTVVAL
+LAGVFAGGVTMAVGMLVHEASVLLVIVNAMRLLRRPGQPRSTTSNSSRSAPVATGAGRPP
+CSAA
+>3_1070
+MVTLAVAAVLLVAGLVVEWTIHSEPVALALFWGAILIGGVYPLRSAIRAVRHKRLTITVL
+LVVAAIGAIALGVIEEAAMLVVIFSLGEAMEAYATDKARGSISALMELAPPTANRLNDDG
+ATKTVAVEELHPGDVVLVRPGERLPTDGAVIDGASWVDASPVTGESVPVEATAGTEVFGG
+SLNGNGVLRIEVTKEYYDTVLARVIEQVEEAQANRSGAERFADKFGAVYTPAMFALAIAV
+ALVLPLLGFEWREAIYRALVVLVVSCSCALIISVPVSVVTAIARGARDGILIKGGIYLER
+LADIKAVAFDKTGTLTRGRPTLAQVTPLDGISEDEALTLAAAVETGSEHPIATAIVAGAR
+DRGLTIPAVQDARALPGAGMEATLDGRTLHIGRPTDEDRTDGTAGPALAHAEAEGCTAVV
+LRDDTRPLAVVAVADQLRPDAESTLTELRDLGVERVLMLTGDNATVARSTAQALGLDDYR
+AELLPEDKSAAIRELREKHGVIAMVGDGVNDAPALANADLAIAMGAASTDVALETADVAL
+MADELDRLPAAIRLSRRARNNIKINIALSLTVVAILIVAALAGWMSLTTGLLLNEGSAAL
+IILNGLRMLRPGRGETRRAQVDFGTRQGSDLNSGRPCAPGSTTDGHSVAAGSSYDQREHG
+R
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001893.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001893.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6b079425d40257c192820e74c22947e3e6a3ae77
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001893.fa
@@ -0,0 +1,23 @@
+>0_2140
+MSTHQHDHGHPRPEASEQTGREHGAPAPQVDPDEDPRAFWEGRYGGERVWSGKVNATTAA
+LVAGLGVTPGRALDLGCGEGGDVLHLAEAGWDVTGIDLSEAAVARARDAARERGVTQRTR
+FLAADLSDPAADWGAHEAGAAGYDLVTASFLQSPVALDRRRILRRAADSLAPGGHLVLVS
+HGAPPPWAPPQLAERGDFPSPAAELAALGVPADGDARWEVLTAELRERDTTGPDGRSTRL
+KDTVVVVRRR
+>0_2525
+MHSTTDQHAASGRYGDEHAELYDLMYGSLPDWKQLPALCRRVRPAARTVLEFGIGNGRLA
+LPLAEEGFEVTGLEASGVLAGQLAARARDLPVDVVVGDFRERLTQDRFDLCLLMTNTLFM
+TEGVADQRRVLRRAAEALAPDGMLIVETYDPQVYLEKPAVSNFSMPLGDDALLTDTVIVD
+RLNCSVHIHHTVVRRGEVTVLRERSSWLTPRELDLVCEEVGLKRTLRFADLAGSPITDST
+RNVVSCYERR
+>0_2610
+MTGATRHDSPSQNPQEFWEGRYRYAERVWSGRPNPSLVNAVQHLAPGKALDLGCGEGADA
+IWLATQGWLVTGVDISATAIARARREAQRQQASAATRFVTADLARWEPDDGPYDLMTASF
+LHSPVPLPRIAILQRAATTVRAGGHLVVLSHAALPPWVDAADHPAHSFPSPARQFVELNL
+NEHDWLVLSIQTHTRHATAPSGEAAELTDGVLLLQRR
+>2_2038
+MSDQHSPGHEHRHGGAAPQIDPGMDPREFWENRYGGEQVWSGKVNATTAALVAGLDLPDG
+PGRALDLGCGEGGDVVHLAEAGWHATGVDISEAAVARGREAAAARGVAERTRFLAADLTD
+TSADWGARDDGAAGYDLVTGSFFQSPVALDRARILRHAASLVAPGGHVVLVSHAAPPSWA
+PPEVAARGDFPTPAGDLEALGIMTEGDEDWEVLVAEVRGRESTGPNGEAGHLDDGVVVVR
+RQR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001905.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001905.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bc636a5e30c155cb026c7b72ed717b59a5cbc4be
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001905.fa
@@ -0,0 +1,24 @@
+>0_2286
+MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEK
+RLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGK
+ALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKI
+LIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALT
+EAMGMLNHHFAAAA
+>0_2291
+MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEK
+RLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGK
+ALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKI
+LIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALT
+EAMGMLNHHFAAAA
+>0_2581
+MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEK
+RLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGK
+ALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKI
+LIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALT
+EAMGMLNHHFAAAA
+>0_2592
+MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEK
+RLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGK
+ALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKI
+LIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALT
+EAMGMLNHHFAAAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001916.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001916.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fe3c41dc8391b3feae76554eb985885533f0b958
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001916.fa
@@ -0,0 +1,15 @@
+>0_2510
+MAAVRALRTLLAEGYATPEAPVAVTGAGWPDYDARVLPGLAAAQELAGVDVDYLRHVDRV
+SDAGIDAASLADLGTLFTYVLRGERFSEGHIGAALANGKVGRMLDRLAELVPQVR
+>1_369
+MTEHPLPTPDDDATLTGPQTPTPQRVAAVRALRELLAAGYGTEARPIASYGAPAPGTLGG
+VYPDYDDRVFPGLVAAQELAGIDVDYLRNVDRVSEAGIAEASLADLGTLFTYLVRGERFA
+DGHVAAAIENGKVGRMLDRLTALVPEIR
+>3_102
+MTEHPLPTPDDDATLTGPQTPTPQRVAAVRALRELLAAGYGTEARPIASYGAPAPGTLGG
+VYPDYDDRVFPGLVAAQELAGIDVDYLRNVDRVSEAGIAEASLADLGTLFTYLVRGERFA
+DGHVAAAIENGKVGRMLDRLTALVPEIR
+>4_375
+MTEHPLPTPDDDATLTGPQTPTPQRVAAVRALRELLAAGYGTEARQIASYGAPAPGTLGG
+VYPDYDDRVFPGLVAAQELAGIDVDYLRNVDRVSEAGIAEASLADLGTLFTYLVRGERFA
+DGHVAAAIENGKVGRMLDRLTALVPEIR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001918.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001918.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0132e2786f622ba99aaebf1928235d525b5d1c76
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001918.fa
@@ -0,0 +1,36 @@
+>1_37
+MSEHQQHVGRRDPRISDEAIERGRRAHELDRAHVFHSWSAQRDLNPMTILDAEGSWVWDG
+EGRPMVDFSGQLVFTNVGHRHPKIVAAIREQAETLATVAPQHVNDARSEAARLITEWLPE
+SINHVFFTNAGAEANDHAVRMARLHTGRHKVLSAYLSYHGATRLTANLTGSLRRVGSDSA
+SDGVVHFQPAYTYRSAFGSENDEQEAERALAHLRDVIELEGPSTVAAVVLEAVPGTAGIF
+MPPPGYMAGVKELCREHGILLIIDEVMVGFGRVGEWFGHQLTGVTPDIVTFAKGVNSGYV
+PLGGVAMSDDVYESFATTPYPGGLTYSGHPLACAAAVAAITAMEEECMVANAKRIGEEII
+GPRLAEIAAAHPSVGDVRGAGAFWAVELVKDRQTRERLAPLGQVAPVMGRMMAEAKDRGL
+LLFMAENRFHLCPPLNISDEDLRFGLDVLDQVLALADEEVAAG
+>3_2001
+MSEHQQHVGRRDPRISDEAIERGRRAHELDRAHVFHSWSAQRNLTPMTILDAEGSWVWDG
+EGRPMVDFSGQLVFTNVGHRHPKIVAAIREQAETLATVAPQHVNDARSEAARLITERLPE
+SINHVFFTNAGAEANEHAVRMARLHTGRHKVLSAYLSYHGATRLTANLTGSLRRVGSDSA
+SDGVVHFQPAYTYRSAFGSESDEQEAERALAHLRDVIELEGPSTVAAVILEAVPGTAGIF
+LPPPGYMAGVKELCREHGILLIIDEVMVGFGRVGEWFGHQLTGVTPDIVTFAKGVNSGYV
+PLGGVAMSDDVYESFATTPYPGGLTYSGHPLACAAAVAAITAMEEEGMVAHAKRIGEEVI
+GPRLAEIAAAHPSVGDVRGAGAFWAVELVKDRQTRERLAPLGQVAPVMGRMMAEAKDRGL
+LLFMAENRFHLCPPLNISDEDLRFGLDVLDQVLALADEEVAAG
+>3_2114
+MTAPAEAGLLDRDAAHLWHPYGAAGARQLYAVRGARGVHLDLEGPGGERHRAIDAMASWW
+SVVHGHGHPALVEALTRQAAAFPHVMFGGLTHAPAVDLAERLVAHTPAALEHVFLADSGS
+VSVEVALKLALQYQATRGRPSRRRFLTVRGGYHGDTAAPMGVCDPVDGMHAAFTSLVARH
+LFLPRPPAARWVPEGFAAAPTAPDAAPAGHWEADDAALAAWEDEARAFTAAHADEIAGVI
+LEPVLQGAGGMRVYDPRCLTVLRELCDEHGLLLIADEIATGFGRTGRWLACEGAGVAPDV
+LCLGKALTGGTMTGAAMLCTAEVAETVSRRERGMPGALLHGPTFMGNPLMCAVASASLDL
+LTDPRDGWAAQVPRVEAGLRAGLAAAADLPAVTDVRVLGAVGVVELDRTVDVEPVTRAAV
+ARGAWVRPFRRLVYVMPPYVSTDDDVATICAAVTGAVEEVCA
+>4_32
+MSEHQQHVGRRDPRISDEAIERGRRAHELDRAHVFHSWSAQRDLNPMTILDAEGSWVWDG
+EGRPMVDFSGQLVFTNVGHRHPKIVAAIREQAETLATVAPQHVNDARSEAARLITERLPE
+SINHVFFTNAGAEANEHAVRMARLHTGRHKVLSAYLSYHGATRLTANLTGSLRRVGSDSA
+SDGVVHFQPAYTYRSAFGSESDEQEAERALAHLRDVIELEGPSTVAAVILEAVPGTAGIF
+LPPPGYMAGVKELCREHGILLIIDEVMVGFGRVGEWFGHQLTGVTPDIVTFAKGVNSGYV
+PLGGVAMSDDVYESFATTPYPGGLTYSGHPLACAAAVAAITAMEEEGMVAHAKRIGDQII
+GPRLAEIAAAHPSVGDVRGAGAFWAVELVRDRQTRERLAPLGQVAPVMGRMMAEAKDRGL
+LLFMAENRFHLCPPLNISDEDLRFGLDVLDQVLTLADEEVAAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001919.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001919.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3d32075bc8f53cf6310aaf2bebbdee54fbe90123
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001919.fa
@@ -0,0 +1,40 @@
+>1_44
+MDTSAPRTSPSTPPASAAHITPEGGSLRRTLKSRHLTMIAMGGAIGTGLFVASGNTIATA
+GPGGALAAYVAIGFMVFLLMQSLGEMSTYLPVSGAFEEYSTRFVSPSFGFAIGWNYWYNW
+AITVAAELVAAALIMRYWLPDVPSWIWSATFLALLFGLNALSTRAYGESEFWFSLIKVAT
+VVIFLVLGVLMIVGILGGSSPGFHNWTDGEAPFVGGGAGILAIFMVAGFSFQGTELVGVA
+AGEAEDPEKNVPKAIRTVFVRILLFYVGAITVVGFLIPYTSPHLLGSDVEDISISPFTLV
+FENAGVLAAASVMNAVILTAILSAGNSGLYASTRMLWALADSGKAPRFLAKVNRRGVPMN
+ALYATTAVGAACFLTTFIGDGAAYVWLVSASGLAGFIVWMGIAWSHYRFRRAYVAQGHDP
+KDLPYRAFLFPLGPIVALVMCAVVILGQNYQAFMGDVDLVAVASAYIGLPLFLALWLGHK
+LVTGSKPVRYEDADLTRVLD
+>2_282
+MNPTDSPRTAGPAGSTAAAASPEPHTGLKRTLAARHLMMIAMGGAIGTGLFVASGNSIAT
+AGPGGALLAYVVIGFMVFLLMQSLGEMATYLPVSGAFEEYATRFVSPSFGFAIGWNYWYN
+WAITVAAELVAAALVMRYWFPDVPSWAWSALFLALLFGLNALSTRAYGESEFWFSLIKVV
+TVVVFLVLGVLMIVGVLGDAAVGTDNWTTGEAPFVGGAPGILAIFLVAGFSFQGTELVGV
+AAGEAEDPERTVPKAIRTVFWRILLFYVGAITVIGFLIPYTSPNLLGSDIEDIAISPFTL
+VFENAGVLAAAAVMNAVILTAILSAGNSGLYASTRMLWALADSGKAPRFLAKVNRRGVPM
+NALVVTTAVGALCFLTTFIGDGAAYVWLVSASGLAGFIVWMGIAWSHYRFRKAYVAQGND
+ITDLPYRAALFPLGPIVALLLCTVVILGQNYEAFLNGVDLVAVASAYIGLPLFLALWIGH
+KLVTGSKGVRPEEADLTRGRA
+>3_2008
+MDTSAPRTSPSTPAASAAHATHEGGSLQRTLKSRHLTMIAMGGAIGTGLFVASGNTIATA
+GPGGALVAYVAIGFMVFLLMQSLGEMSTYLPVSGAFEEYSTRFVSPSFGFAIGWNYWYNW
+AITVAAELVAAALIMRYWLPDVPSWIWSAIFLALLFGLNALSTRAYGESEFWFSLIKVAT
+VVIFLVLGVLMIVGILGGSSPGFHNWTDGEAPFVGGGAGILAIFMVAGFSFQGTELVGVA
+AGEAEDPEKNVPKAIRTVFVRILLFYVGAITVVGFLIPYTSPHLLGSDVEDISISPFTLV
+FENAGVLAAASVMNAVILTAILSAGNSGLYASTRMLWALADSGKAPRFLAKVNRRGVPMN
+ALYATTAVGAACFLTTFIGDGAAYVWLVSASGLAGFIVWMGIAWSHYRFRRAYVAQGHDP
+KDLPYRAFLFPLGPIVALVMCAVVILGQNYQAFMGDVDLVAVASAYIGLPLFLALWLGHK
+LVTGSKPVRYEDADLTRVLD
+>4_39
+MDTSAPRTSPSTPAASAAHATHEGGSLQRTLKSRHLTMIAMGGAIGTGLFVASGNTIATA
+GPGGALVAYVAIGFMVFLLMQSLGEMSTYLPVSGAFEEYSTRFVSPSFGFAIGWNYWYNW
+AITVAAELVAAALIMRYWLPDVPSWIWSAIFLALLFGLNALSTRAYGESEFWFSLIKVAT
+VVIFLVLGVLMIVGILGGSSPGFHNWTDGEAPFVGGGAGILAIFMVAGFSFQGTELVGVA
+AGEAEDPEKNVPKAIRTVFVRILLFYVGAITVVGFLIPYTSPHLLGSDVEDISISPFTLV
+FENAGVLAAASVMNAVILTAILSAGNSGLYASTRMLWALADSGKAPRFLAKVNRRGVPMN
+ALYATTAVGAACFLTTFIGDGAAYVWLVSASGLAGFIVWMGIAWSHYRFRQAYVAQGHDP
+KDLPYRAFLFPLGPIVALVMCAVVILGQNYQAFMGDVDLVAVASAYIGLPLFLALWLGHK
+LVTGSKPVRYEDADLTRVLD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001920.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001920.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e5bd3a970c9e88d584446a44e74d831fb92c623b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001920.fa
@@ -0,0 +1,29 @@
+>1_69
+MRHPAPLPAALLHGPFTAAQARAAGIDRNRLRRSDVERLARGLYRRREATPAAVERPAAG
+SSPYRWSTPLSATQHELLLRLARHRATTVVSHQTAARAREIWLPERLDAGDGVHVSRPRD
+RGRLALPGVISHRTALPPADVERVRIGGLAWHVTAPPRLWVDLAALLDDDELVILGDHLV
+RRAKLSGGPGAAERARAALAQAAEASPSAHNRRRRLRTAATLVRVGAHSPKETRLRLALT
+AAGLPEPALQLEARDPEFSLHHPATADLGYRQARVALHYDGGHHGADRQIDRDVQRNAAF
+ERRGYRNITVSSSDARRGFTRVIVEVRRHLGDAGDLSRKESEWGVNGTSERPLT
+>2_247
+MERWPPHTDIMSRPPRDLPAVLRRGPFTTASALALGVPASRLRRSDVRRLRRGVLVWTGA
+TDGGSTVDPALPPRPAAASGADTPWVLASRLTPSEQETLAGVLAAAPDATASHLTAARLT
+GLWLPTRLAADRTLHVTRPPGTANSAPAGVRMHRRRPTSEGAQLVRGSGPPLDGPIPVTG
+PARTWRDLASLLDLAELVVLGDRLVCSSGPERADPLCSRAALVQAAARPGQRHAVLARDA
+AALVRDGAHSPPETRLRLALLDAGLPEPELQLEVWDPAFSRSRPATADLGWRRHGVVLQY
+EGAGHDDPVQVRGDTLRDAAFQRRGVVVIRAAAADLAEGFRGTTALAEAALRRRGWTPGR
+E
+>3_2033
+MRRPTPLPASLLDGPFTAAQARAAGIDHNRLRRSDVERLARGLYRRREAAPAAVERPAAG
+SSPYRWSTPLSATQHELLLRLARHRATTVVSHQTAARAREIWLPERLDAGDEVHVSRPRD
+RGRLALPGVTSHRTALPPADVERVRIGGLAWYVTAPPRLWVDLAALLDDDELVILGDHLV
+RRAELSGGPDAAERTRAALTQAAETSPSAHNRRRRLRTAATLVRVGAHSPKETRLRLALT
+AAGLPEPALQLEVWDPEFSLHHPATADLGYPQARVALHYDGGHHGADRQIDRDVQRNAAF
+ERRGYRNITVSSSDARRGFTRVIVEVRRHLGDAGGLSRKESEWGGDPASERHHA
+>4_63
+MRHPAPLPAALLHGPFTAAQARAAGIDLNRLRRSDVERLARGLYRRREVTPAAVERPAAG
+SSPYRWSTPLSATQHELLLRLARHRATTVVSHQTAARAREIWLPERLDAGDDVHVSRPRD
+RGQLSLPGVTSHRTALPPADVERVRIGGLAWYVTAPPRLWVDLSALLDDDELVILGDHLV
+RRAQLSGGPDAAERTRAALAQAAEASPSAHNRRRRLRTAATLVRVGAHSPKETRLRLALR
+AAGLPEPALQLEVWDPEFSLHHPATADLGYRQARVALHYDGGHHGADRQIDRDVQRNAAF
+ERRGCRNITVSSSDARRGFTRVIVEVRRHLGDAGDLSRKESEWGVNGTSERPLT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001923.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001923.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3bf1bc102a6ca397fcbf7c21c0865d2264309010
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001923.fa
@@ -0,0 +1,20 @@
+>1_219
+MTTTHMHTDAEDTIHPTQPAPDAGPLSQAEIDRLFADRHTTQLFSDEPVDLALIERAYAD
+LRWAPTAMNNQPLRLDVVDSPEARARLAPLMIEFNREKTERAPLTLIASYDLDWHRHMGH
+LAPFREGFEEDAEGKPGMREGMGRTNALIQVGYLLVALRAHGLEVGPMAGFDAAAVDAEF
+HADRAWKSLLVINVGHAAADDEKAQQPRQGRLDFDQAAQVL
+>2_101
+MTTTYMHTDAEDTIHSTQPAPDAGPLSQAEIDRLFADRHTTQLFSDEPVDLALIERAYAD
+LRWAPTAMNNQPLRLDVVDSPEARARLAPLMIEFNREKTERAPLTLIASYDLDWHRHMGH
+LAPFREGFEEDAEGKAGMREGMGRTNALIQVGYLLVALRAHGLEVGPMAGFDAAAVDAAF
+HADRAWKSLLVINVGHAAADDEKAQQPRQGRLDFDQAAQVL
+>3_2183
+MTTTHMHTDAEDTIHPTQPAPDAGPLSQAEIDRLFADRHTTQLFSDEPVDLALIERAYAD
+LRWAPTAMNNQPLRLDVVDSPEARARLAPLMIEFNREKTERAPLTLIASYDLDWHRHMGH
+LAPFREGFEEDAEGKPGMREGMGRTNALIQVGYLLVALRAHGLEVGPMAGFDAAAVDAEF
+HADRAWKSLLVINVGHAAADDEKAQQPRQGRLDFDQAAQVL
+>4_220
+MTTTHMHTDAEDTIHPTQPAPDAGPLSQAEIDRLFADRHTTQLFSDEPVDLALIERAYAD
+LRWAPTAMNNQPLRLDVVDSPEARARLAPLMIEFNREKTERAPLTLIASYDLDWHRHMGH
+LAPFREGFAEDAEGKPGMREGMGRTNALIQVGYLLVALRAHGLEVGPMAGFDAAAVDAEF
+HADRAWKSLLVINVGHAAADDEKAQQPRQGRLDFDQAAQVL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001926.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001926.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2bb933c02f2b9c7cf77636284d6ebb274b712348
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001926.fa
@@ -0,0 +1,28 @@
+>1_366
+MAPWLPTRSRRPFPQVTEAGEVPAVTPTFEGRASHPPAEDVEDQGAAFDVGTLVSRRNAL
+GIFGAGAGALVLAACGVQEGASSSSSSTSASAGSSSPAASSSSAASASPSATLTEMVTET
+AGPYPGDGSNGPDVLDASGIERSDLTTSIDTGTVAEGVPLTVTMNVIDMANGDAAMTGAA
+VYLWHADAQGRYSMYSDGITEETYLRGVQVVGDDGTVTFTTVWPGCYDGRWPHLHFEVFP
+DKASITDATNNVLTSQIAMPEEQSSQVYATSAYDGSTANFAKVSLETDNVFSDGYETQLP
+QITGSVEKGFAITIDVPIDTTTEQEQGGMGGPGGGQPPAGGEGGQPPAQP
+>2_2385
+MAPWLPTRSRRPFPQVTEGGEAPAVTPTFEGRAFHRPAEDVEDQGAAFDVGTLVSRRNAL
+GIFGAGAGALVLAACGVQEGASSSSSSTSASAGSSSPAASSSAASASPSATLTEMVTETA
+GPYPGDGSNGPDVLDASGIERSDLTTSIDTGTVAEGVPLTVTMNVIDMANGDAAMTGAAV
+YLWHADALGRYSMYSDGITEETYLRGVQVVGDDGTVTFTTVWPGCYDGRWPHLHFEVFPD
+KASITDATNNVLTSQIAMPEEQSSQVYATSAYDGSTANFAKVSLETDNVFSDGYETQLPQ
+ITGSVEKGFAITIDVPIDTTTEQEQGGMGGPGGGQPPAGGEGGQPPARP
+>3_99
+MAPWPPTRSRRPFPQVTEGGGAPAVTPTFEGRAFHRPAEDVEDQGAAFDVGTLVSRRNAL
+GIFGAGAGALVLAACGVQEGASSSSGSTSASAGSSSPEASSSSAASASPSATLTEMVTET
+AGPYPGDGSNGPDVLDASGIERSDLTTSIDTGTVAEGVPLTVTMNVIDMANGDAAMTGAA
+VYLWHADAQGRYSMYSDGITEETYLRGVQVVGDDGTVTFTTVWPGCYAGRWPHLHFEVFP
+DKASITDATNNVLTSQIAMPAEQSAQVYATSAYDGSTENFAQVSLETDNVLSDGYETQLP
+QITGSVEKGFAITIDVPIDTTTEQEQGGMGGPGGGQPPARP
+>4_372
+MAPWLPTRSRRPFPQVTEAGEVPAVTPTFEGRAFHHPAEDVEDQGAALDVGTLVSRRNAL
+GIFGAGAGALVLAACGVQEGASSSSGSTSASAGSSSPAASSSSAASASPSATLTEMVTET
+AGPYPGDGSNGPDVLDASGIERSDLTTSIDTGTAAEGVPLTVTMNVIDMANGDAAMTGAA
+VYLWHADAQGRYSMYSDGITEETYLRGVQVVGDDGTVTFTTVWPGCYDGRWPHLHFEVFP
+DKASITDATNNVPTSQIAMPEEQSAQVYATSAYDGSTENFADVSLETDNVFSDGNETQLP
+QITGSVEKGFAITIDVPIDTTTEQEQGGMGGPGGGQPPAGGEGGQPPAQP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001927.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001927.fa
new file mode 100644
index 0000000000000000000000000000000000000000..800e9b5603bc45ce30556755d579122adcb07a28
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001927.fa
@@ -0,0 +1,28 @@
+>1_374
+MDATPHARPAEPGPLPDPAEPRRLAGKDVHPVGLGCMNIVHGYSGFLDDDAAVDLLTRVL
+EDGTDHLDTATLYGGGRSEELVGRALARAGSGVRERVLLASKGGLVRDGQRRIDGRPETL
+RAHVDASLSRLGQDRIDLYYLHRLDPEVPVEESVGALAEAVTEGKIGAIGLSEVSAVTLT
+RAVAVHPIAAVQSEYSLATRNPEWGVLEACRRHGTAFVAFSPVSRGLLTDAPPRLGGLDA
+GDLRHRLPRFAEGHYEANLTLREALSAEAVRLGTSTAGLAVAWVLAQGKDVLAIPGTTSW
+EHWLEDRGAHEVRLTPADVARLDDLVNDATVAGPRYSESQQASIDTEAAPPR
+>2_2377
+MDTAANPALTTDLRSPRRVAGKDVRPVGLGCMNLVHGYSGFLSEREAVDLVVGVLADGTD
+HLDTATLYGGGLSEEYVGKALTRVGADVRDRVLLASKCGLSRDADRPIDGRPETLRAQVD
+ASLRRLGQDRIDLYYLHRLDPRVPVEESVGALAEAVAAGKIGAIGLSEVSGATLDRAATE
+HPVAAVQNEYSLATRNPEWGLLEACRRHGAALVAFSPVCRGLLTDAPPVVADLPDGDMRH
+AMPRFQGPAWEANLRLREEFASEAARLGVPAASLAVAWVLAQGADVVAIPGTTDPAHWRE
+DRGAEEVSLTLEDLARLDALVNHATVQGRRYSDAQQASVDTEDAPQQG
+>3_107
+MDATPHARPAEPGPLPDPAEPRRLAGKDVHPVGLGCMNIVHGYSGFLDDDAAVDLLTRVL
+EDGTDHLDTATLYGGGRSEELVGRALARAGSDVRERVLLASKGGLVRDGQRRIDGRPETL
+RAHVDASLSRLGQDRIDLYYLHRLDPEVPVEESVGALAEAVTEGKIGAIGLSEVSAVTLT
+RAVAVHPIAAVQSEYSLATRNPEWGVLEACRRHGTAFVAFSPVSRGLLTDAPPRLGGLDA
+GDLRHRLPRFAEGHYEANLTLREALSAEAVRLGTSTAGLAVAWVLAQGKDVLAIPGTTSW
+EHWLEDRGAHEVRLTPADVARLDDLVNDATVAGPRYSESQQASIDTEAAPPR
+>4_380
+MDATPHPRPAEPGPLPDPAAPRRLAGKDVHPVGLGCMNIVHGYSGFLDDDAAVDLLTRVL
+EDGTDHLDTATLYGGGRSEELVGRALARAGSDVRERVLLASKGGLVRDGQRRIDGRPETL
+RAHVDASLSRLGQDRIDLYYLHRLDPEVPVEESVGALAEAVTEGKIGAIGLSEVSAVTLT
+RAVAVHPIAAVQSEYSLATRNPEWGVLEACRRHGTAFVAFSPVSRGLLTDAPPRLGGLDA
+GDLRHRLPRFAEGHYEANLTLREALSAEAVRLGTSTAGLAVAWVLAQGKDVLAIPGTTSW
+EHWLEDRGAHEVRLTPADVARLDDLVNDATVAGPRYSESQQASIDTEAAPPR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001929.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001929.fa
new file mode 100644
index 0000000000000000000000000000000000000000..42b03b784a1a74dbf595289c793423af6de4cd47
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001929.fa
@@ -0,0 +1,20 @@
+>1_454
+MTATPQTPAQPLQDDAPVVSVVMGSDSDWPVMSAAAEALRELDVPVEVGVVSAHRMPHEM
+VEFGARAHERGIRVIVAGAGGAAHLPGMLAAVTPLPVIGVPVKLKSLDGMDSLLSIVQMP
+AGVPVATVSIDGARNAGLLAARILASADTAEGDRLRAALAEHADELNAQARAKGARLRER
+MAADR
+>2_2300
+MTAEQTTQPTSDAPCTRPLQEEAPVVSVVMGSDSDWPVMGQAVEALRELGVPVEVGVVSA
+HRMPHEMVDFGARAHERGIRVIVAGAGGAAHLPGMLAAVTPLPVIGVPVKLRSLDGLDSL
+LSIVQMPAGVPVATVSVDGARNAGLLAARILAAGTDDGAAHLRAALQDVAAGLNAQARAK
+GARLHERAADGA
+>3_181
+MTATPQTPAQPLQDDAPVVSVVMGSDSDWPVMSAAAEALRELDVPVEVGVVSAHRMPHEM
+VEFGARAHERGIRVIVAGAGGAAHLPGMLAAVTPLPVIGVPVKLKSLDGMDSLLSIVQMP
+AGVPVATVSIDGARNAGLLAARILASADTAEGDRLRAALAEHADELNAQARAKGARLRER
+MAADR
+>4_454
+MTATPQTPAQPLQDDAPVVSVVMGSDSDWPVMSAAAEALRELDVPVEVGVVSAHRMPHEM
+VEFGARAHERGIRVIVAGAGGAAHLPGMLAAVTPLPVIGVPVKLKSLDGMDSLLSIVQMP
+AGVPVATVSIDGARNAGLLAARILASADTAEGDRLRAALAEHADELNAQARAKGARLRER
+MAADR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001935.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001935.fa
new file mode 100644
index 0000000000000000000000000000000000000000..db2526ab6df6f264daaaf6363800cfeb36ce9ec6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001935.fa
@@ -0,0 +1,25 @@
+>1_759
+MSAPAWSALLRDAAARLTTVGIDSPRVDAELLLAHVLGLDRGALLARVFAGAVAEPAQAA
+AFEALIGRRAAREPVQHLTGVAHFHGLDLAVGPGVFVPRPETELLVETVVADLAARPTAG
+VVVDLCTGSGAIAAAVAAWGEARGRPLAVTAVELDPTAADWARRNLAPRGVDLRQGDALV
+ACPDLEGRVDVVVSNPPYVPEAEVPAQPEARLDPARALYGGDAPGLRIPQAIVHRAAELL
+VPGGLFAMEHHETQGPALLAALGADPRFMGVRVHRDLTGRDRFLTARRSGEAAAGAEVEE
+>2_1988
+MTSSGPATPPADWSALLRQAAATLRAAGVDSPRADAELLLSHLLGGDRGTLLARVLAGAA
+PGPGQAEAFGALVERRAVREPLQHITGAAAFHGLTLEVGPGVFVPRPETELLVEEGIRAL
+AVLDGPARVVDLCTGSGAIAAAVAAWAEERHRDVAVTAVEREDAALAWARRNLEPRGVDL
+RQGDALVACADLDGTVDVVLSNPPYVPDAELPVQAEALADPPTALYGGDAAGLRIPRGII
+ARAAGLLRPGGRLVMEHHEAQGEALAAEARLGGRFEDVRVLPDHTGRERFLAAVRTGALV
+APPSDGRMEP
+>3_499
+MSAPAWSALLRDAAARLTTVGIDSPRVDAELLLAHVLGLDRGALLARVFAGAVAEPAQAA
+AFEALIGRRAAREPVQHLTGVAHFHGLDLAVGPGVFVPRPETELLVETVVADLAARPTAG
+VVVDLCTGSGAIAAAVAAWGEARGRPLAVTAVELDPTAADWARRNLAPRGVDLRQGDALV
+ACPDLEGRVDVVVSNPPYVPEAEVPAQPEARLDPARALYGGDAPGLRIPQAIVHRAAELL
+VPGGLFAMEHHETQGPALLAALGADPRFMGVRVHRDLTGRDRFLTARRSGEAAAGAEVEE
+>4_726
+MSAPAWSALLRDAAARLTAVGIDSPRVDAELLLAHVLGLDRGALLARVFAGAVAEPAQAA
+AFEALVGRRAAREPVQHLTGVAHFHGLDLAVGPGVFVPRPETELLVETVVADLAARPAAG
+AVVDLCTGSGAIAAAVAAWGEARGRPLAVTAVELDPTAADWARRNLAPRGVDLRQGDALV
+ACPDLEGRVDVVVSNPPYVPEAEVPAQPEARLDPARALYGGDTPGLRIPRAIAHRAADLL
+APGGLFAMEHHETQGPALLSALGADRRFTGERVHQDLTGRDRFLTARRSGEAAAGAEVEE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001939.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001939.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c91596a1221f12bd049c13512587e06a8d43eeef
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001939.fa
@@ -0,0 +1,20 @@
+>1_1019
+MFTGIVTHLGTVVALEHDAAADTALLTLDAGGALDGLPAGGSLAVDGVCLTALDGPTERP
+GVFRADLMGQTLRMTSLGDRAPGDRVNLERCLRPTDHLDGHVVQGHVDGTGEVLAVTPHG
+AWTTLRIGLPARLARYVPAQGAIALQGVSLTVTAVSDPGAAAHWFEVGIIPATLEATTLG
+ALRPGDRVNLETDVLARYAERLALIPSAPAAPTEEARP
+>2_1679
+MFTGIITHLGTVLSLEERPETDTAVLTVDAGGALDGLPAGGSLAVDGVCLTALDDDAASA
+APGVFRADLMGQTLRMTSLGGRRPGDRVNLERCLRPTDHLDGHVVQGHVDGTGTVLAVSP
+HGDWTTLRIGLPARLARYVAAQGAIALQGVSLTVTGVSPADAREHWFEVGLIPATLEATT
+LGRLAAGDTVNLETDVLARYAERLAAIPAPTTEEPHA
+>3_747
+MFTGIVTHLGTVVALEHDAAADTALLTLDAGRALDGLPAGGSLAVDGVCLTALDGPTERP
+GVFRADLMGQTLRMTSLGDRAPGDRVNLERCLRPTDHLDGHVVQGHVDGTGEVLAVTPHG
+AWTTLRIGLPARLARYVPAQGAIALQGVSLTVTAVSDPGAAAHWFEIGIIPATLEATTLG
+ALRPGDRVNLETDVLARYAERLALIPSAPAAPTEEARP
+>4_966
+MFTGIVTHLGTVVALEHDAAADTALLTLDAGGALDGLPAGGSLAVDGVCLTALDEPTERP
+GVFRADLMGQTLRMTSLGDRAPGDRVNLERCLRPTDHLDGHVVQGHVDGTGEVLAVTPHG
+AWTTLRIGLPARLARYVPAQGAIALQGVSLTVTAVSDPGAAAHWFEIGIIPATLEATTLG
+ALRPGDRVNLETDVLARYAERLALIPSAPAAPTEEARP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001945.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001945.fa
new file mode 100644
index 0000000000000000000000000000000000000000..67f5a4d9cda34ded4a6d53823d1df6ea9421c4e0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001945.fa
@@ -0,0 +1,12 @@
+>1_1242
+MTTETAADETGTDAGAHRHGYISDKDRYRNRMKRIEGQARGITKMIDDEKYCIDILTQVS
+ALTRALQGVATGLLDDHLKHCVLDAAKKGDEDAAIAKIQEATDAINRLVRS
+>2_692
+MSVDNDSHQHGYISDKERYLGRMKRIEGQARGIAKMIDEEKYCIDILTQVSALTRALQGV
+ATGLLDDHLKHCVLDAAKLSDEAAVEKIQEATDAINRLVRS
+>3_970
+MTTETAADETGTDAGAHRHGYISDKDRYRNRMKRIEGQARGITKMIDDEKYCIDILTQVS
+ALTRALQGVATGLLDDHLKHCVLDAAKKGDEDAAIAKIQEATDAINRLVRS
+>4_1199
+MTTETAADETGADTGAHRHGYISDKDRYRNRMKRIEGQARGITKMIDDEKYCIDILTQVS
+ALTRALQGVATGLLDDHLKHCVLDAAKKGDEDAAIAKIQEATDAINRLVRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001947.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001947.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e0709e0ec7b974ab243df08eece5046e20796975
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001947.fa
@@ -0,0 +1,32 @@
+>1_1309
+MIGLLIGGVLGLVLSAVGTPLFIRFLVKRGYGQFVRDDGPTTHKTKRGTPTMGGAVIIGS
+MVLAYLITHGLLAVFGVDFGGPTASGLILLLLTVGMAFVGFVDDFTKITKQRSLGLTPRG
+KIILQALIGTAFAVLALNFPDERGLTPASTAISFARDIPWLDLAFAGPAIGVILFVIWSN
+LITTATTNAVNLTDGLDGLATGATAMITGAYVLISLFQSSQSCALEGTRGCYEVRDPMDL
+ALLAAILTGSLLGFLWWNTSPAKIFMGDTGSLGLGGALAGFAIFTRTEILVAVLAGLMVA
+ITLSVIIQVGWFKVSGGKRVFLMAPLQHHFELKGWAEVTVVVRFWLLSLMCVTVGLAIFY
+GDWLIRQGGLAGVTP
+>2_1401
+MIGLLIGGVLGLILSGLGTPLFIRYLVKRGYGQQVRDDGPQTHKSKRGTPTMGGFVIISA
+LVLGYLLTHGILALLGSELAGPTASGWIVLLLTVGMAFVGWIDDYTKIAKQRSLGLTPKG
+KIILQGLIGTAFAVLALLFPNADGVTPASTAVSFVRDIPWLELAFAGPVVGVVLFVIWSN
+IITTATTNAVNLTDGLDGLAAGATAMVTGAYVLVSLFQASQSCGLTEGAEACYVVRDPMD
+LGLLAAVLTGALLGFLWWNTSPAKIFMGDTGSLGLGGALAGLAILSRTEILVVILAGLMV
+AITLSVIIQVGWFKISGGKRVFLMAPLQHHFELKGWAEVTVVVRFWLISLVCVIIGLALF
+YGEWLLQHGALQAVAR
+>3_1038
+MIGLLIGGVLGLVLSAAGTPLFIRFLVKRGYGQFVRDDGPTTHKTKRGTPTMGGAVIIGS
+LVLAYLITHGLLAVLGVDFGGPTASGLILLLLTVGMAFVGFVDDFTKITKQRSLGLTPRG
+KIILQALIGTAFAVLALNFPDERGLTPASTAISFARDIPWLDLAFAGPASGVILFVIWSN
+LITTATTNAVNLTDGLDGLATGATAMITGAYVLISLFQSSQSCALEGTRGCYEVRDPMDL
+ALLAAILTGSLLGFLWWNTSPAKIFMGDTGSLGLGGALAGFAIFTRTEILVAVLAGLMVA
+ITLSVIIQVGWFKVSGGKRVFLMAPLQHHFELKGWAEVTVVVRFWLLSLMCVTVGLAIFY
+GDWLIRQGGLAGVTP
+>4_1263
+MIGLLIGGVLGLVLSAVGTPLFIRFLVKRGYGQFVRDDGPTTHKTKRGTPTMGGAVIIGS
+MVLAYLITHGLLAVFGVDFGGPTASGLILLLLTVGMAFVGFVDDFTKITKQRSLGLTPRG
+KIILQALIGTAFAVLALNFPDERGLTPASTAISFARDIPWLDLAFAGPAIGVILFVIWSN
+LITTATTNAVNLTDGLDGLATGATAMITGAYVLISLFQSSQSCALEGTRGCYEVRDPMDL
+ALLAAILTGSLLGFLWWNTSPAKIFMGDTGSLGLGGALAGFAIFTRTEILVAVLAGLMVA
+ITLSVIIQVGWFKVSGGKRVFLMAPLQHHFELKGWAEVTVVVRFWLLSLMCVTVGLAIFY
+GDWLIRQGGLAGVTP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001949.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001949.fa
new file mode 100644
index 0000000000000000000000000000000000000000..38e8e91ce4e14165173b51eb5e416c1f97895c22
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001949.fa
@@ -0,0 +1,24 @@
+>1_1356
+MTEHTRDDVAPAPLVVAVDGPSGSGKSSVSKAVARRLGAAYLDTGAMYRAVAWHCLNEGV
+DLADAEAVAAAAVAMDLDQSTDPDVEAVRVGGTDVTEAIRGPEVTDTVSTVAVVIPVREE
+LHRRQRAAIAAAGRMVAEGRDITTVVAPDAHARVLLTASEAVRTARRSGQLAAAGETGVD
+AGTLHRQVAGRDARDATVSTFDRPADGVALVDSTELDFEQTVAAVLAAVEDQAGIPAVKG
+GRR
+>2_1373
+MTEHTQHDDAARPALVVAVDGPSGSGKSSVSKAVARRLGAAYLDTGAMYRAVAWHVLDSG
+VDLADPDAIAGAARAMDLRQSTDPDVESVVVGGTDVTDAIREDRVTDVVSTVAVVIPVRE
+ELQRRQRAAIAGAGRIVAEGRDITTVVAPDAHARVLLTASAEARMARRSGQLQRAGAGER
+DAATLERQVSGRDARDSAVSTFDRPAEGVALVDSTELDFEQTVAAVLAAVQDQAGVDAVP
+GR
+>3_1095
+MTEHTRDDVAPAPLVVAVDGPSGSGKSSVSKAVARRLGAAYLDTGAMYRAVAWHCLHEGV
+DLADAEAVAAAAVAMDLDQSTDPDVEAVRVGGTDVTEAIRGPEVTDTVSTVAVVIPVREE
+LHRRQRAAIAAAGRMVAEGRDITTVVAPDAHARVLLTASEAVRTARRSGQLAAAGETGVD
+AGTLHRQVAGRDARDATVSTFDRPADGVALVDSTELDFEQTVAAVLAAVEDQAGIPAVKG
+GRR
+>4_1305
+MTEHTRDDVAPAPLVVAVDGPSGSGKSSVSKAVARRLGAAYLDTGAMYRAVAWHCLHEGV
+DLADAEAVAAAAVAMDLDQSTDPDVEAVRVGGTDVTEAIRGPEVTDTVSTVAVVIPVREE
+LHRRQRAAIAAAGRMVAEGRDITTVVAPDAHARVLLTASEAVRTARRSGQLAAAGETGVD
+AGTLHRQVAGRDARDATVSTFDRPADGVALVDSTELDFEQTVAAVLAAVEDQAGIPAVKG
+GRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001951.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001951.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ae4acfa67d6549e3e99bfee7999c9aaef564ba02
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001951.fa
@@ -0,0 +1,37 @@
+>1_1361
+MVQQRVVRAPGRSDPGGSVPPTALAAAAREGVTTAPAGSRVLVLHDRTDLQRLGDELTVA
+HTLTTALRAQTHEHANQLHTALALVESGRLEAARAVLSRRAADEEASDDVLAALLDAKAA
+QARERGVALTWSAELTAPAPLRPLDLLTVLGNLVDNDLDAAAAPDLSAVDRWVDVEVVSD
+ATGLVVQVADGGPGPSDADRRRLFDRGWSTKPVGAAGRGMGLWLTRRIAEEAGGVVDVAT
+DSGTVFTVEVPREPTPQEET
+>2_1367
+MRHPWSIARRVAASLVLLLSVIAVFSGWAGWRQARDATFVVEERHVLGVARLAAREEVVV
+DALGSPAGAAALQARIPSVVDDAGVSWLTLLDARGTRVASWRPEQVGTAYPAPVDRALAG
+ESWTEVSATGPAGISVRALVPVRDAEGAVVGVLTMGVRVSELEVAASAQLPRLAVTFALT
+LAAGLGAALLVARYLHRVTLGRGPEDLAESFLLSAAAMDSLEASLVVLAPDGSIRQHNAA
+AVHALGLPARTEDGTVPAAARLPEELARALEEHADADFPARVGDRLFVVRQRVLGAARPR
+RGGAVDDAAREGISPAPAGTRVLMLHDRTDLQRLTDDLALSRTLTAALRSQTHEHANQLH
+TALALLDSGRTDAARDVLTRHRRPDQDAEDVVSALLEAKAAQAAERGVELTYAVRLSAPA
+PLAALDLVSVVGNLVDNALDAAADAAEPAGRWVDADVTCDADGLLVQVADGGPGLDPDGD
+RVFEPGWSTKPAGIAGRGMGLALVRSIASQAGGVVEVATDSGTVFTVEVPPAGPEQDGEA
+A
+>3_1100
+MRHPWSIARRIAVVHVALVAAIALFSVWSAYLQAREVAQRVEERHVQGVTTLVARDPALV
+SALRAGDAPALQAGIDGWIAEAQVSWLTVMDPDGMRLASWRPEQVGVRYPRPVDAVVAGD
+TVVELSSTGAAGRSVRALAPVVDPEDGTVLGVVTTGVQISDVAIMAQAQIPGILLGSAAV
+AAVGLLVAWLVGRYLNRVTLGRGPEQIAEQFLLAETAMDSLEAGVVVLAPDGRARLHNDA
+AARLLGWEGAGEPRLPTELSAALPGAVSGEASLAAGGRVLVVQQRVVRSPGRSDPGGSVP
+PTALAAAAREGVTTAPAGSRVLVLHDRTDLQRLGDELTVAHTLTTALRAQTHEHANQLHT
+ALALVESGRLEAARAVLSRRAADEEASDDVLAALLDAKAAQARERGVALTWSAELTAPAP
+LRPLDLLTVLGNLVDNALDAAAAPDLSAADRWVDVEVVSDAAGLVVQVADGGPGPSDADR
+GRLFDRGWSTKPVGAAGRGMGLWLTRRIAEEAGGVVDVATDSGTVFTVEVPREPTPQEET
+>4_1310
+MRHPWSIARRIAVVHVALVAAIALFSVWSAYLQAREVAQRVEERHVQGVTTLVARDPALV
+SALRAGDAPALQAGIDGWIAEAQVSWLTVMDPDGMRLASWRPEQVGVRYPRPVDAVVAGD
+TVVELSSTGAAGRSVRALAPVVDPEDGTVLGVVTTGVQISDVAIMAQAQIPGILLGSAAV
+AAVGLLVAWLVGRYLNRVTLGRGPEQIAEQFLLAETAMDSLEAGVVVLAPDGRVRLHNDA
+AARLLGWEGAGEPRLPTELSAALPGAVGGEASLAVGGRVLVVQERVVRAPGRSDPGGSVP
+PTALAAAAREGVTTAPAGSRVLVLHDRTDLQRLGDELTVAHTLTTALRAQTHEHANQLHT
+ALALVESGRLETARAVLSRRAADEEASDDVLAALLDAKAAQARERGVALTWSAELTAPAP
+LRPLDLLTVLATWWTTPSTPPPHRTCPRQTGGSTSKWSRTPRAWWCRWPTAAPDPPTRTA
+AGSSTGAGRRSPSAPPDAAWGCG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001953.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001953.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e954a9f5b972ca25146ec092bca14cfbe1a8a8f1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001953.fa
@@ -0,0 +1,15 @@
+>1_1393
+MTAPDSLDGTDPLLRGVGLDAQTRCAHYATARDVVALRFACCPAYWSCHRCHAELADHPA
+VPVPAGEFDRPHVLCGVCRTELSVTAYLALEATADPACPACGAPFNPGCADHAPLYFDVP
+ASGSPAGDADPAAQP
+>2_1332
+MVTPADPGPAVRGVDADPQTRCAHYRTERDVVALRLDCCPEYWCCRECHDELAGHPGRPL
+PREAFGLPSVLCGVCRHEMDVPAYRAAMAHADPHCPACGAGFNPGCSRHARLYFAVDA
+>3_1134
+MTAPDSLDGTDPLLRGVGLDAQTRCAHYATARDVVALRFACCPAYWSCHRCHAELADHPA
+VPVPAGDFDRPHVLCGVCRTELSVAAYLALEATADPACPACGAPFNPGCAAHAPLYFDVP
+ASGSPAGDVDPATRP
+>4_1342
+MTAPDSLDGTDPLLRGVGLDAQTRCAHYATARDVVALRFACCPAYWSCHRCHAELADHPA
+VPVPAGDFDRPHVLCGVCRTELSVTAYLALEAAADPACPACGAPFNPGCAAHAPLYFDVP
+ASGSPAGEADPPAQP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001958.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001958.fa
new file mode 100644
index 0000000000000000000000000000000000000000..64e6cfe84c1e5d382b82acd29ce5d94eefc87509
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001958.fa
@@ -0,0 +1,16 @@
+>1_1453
+MLATTLEQISVAGARGRPRIRPDRLIADKGYPSKANRAWLRRHGIAATIPERADQITHRR
+RRPGRPIDFGEDQRQRYRGRNVVERCFNRLKQWRGIAMRSDKYARNYHAGLSLAATLHWL
+TTLL
+>2_623
+MTTKIHLVCDGKGRTLAFVLTGGQVADTSMFPDTIDEIRVVGVKGRPRTRPERVIADKGY
+PSKKNRAWLRQRGIATTIPERDDQIAHRRKKPGRPIDFGRDQKRRYKGRNAVERCFNKLK
+QWRGIAARSDKTPRNFHAGLSLAATLQWV
+>2_1709
+MNYKKSGDEPADHAIGRSRGGLTTKSHLVCDGKGRVLAFVVTGGQVADTSMLATTLELIS
+VAGARGRPRARPDRLIADKGYPSKANRSWLRRHGIAATIPERADQIAHRRRRPGRPIDFG
+EDQRQRYRGRNVVERCFNRLKQWRGIAMRSDKYARSYHAGLCLAATLHWLTTTL
+>2_2184
+MNYKKSGDEPADHAIGRSRGGLTTKSHLVCDGKGRVLAFVVTGGQVADTSMLATTLELIS
+VAGARGRPRARPDRLIADKGYPSKANRSWLRRHGIAATIPERADQIAHRRRRPGRPIDFG
+EDQRQRYRGRNVVERCFNRLKQWRGIAMRSDKYARSYHAGLCLAATLHWLTTTL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001959.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001959.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fc868364facd2d3aaf01d5d8e9ea8ac7ff575f98
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001959.fa
@@ -0,0 +1,28 @@
+>1_1538
+MTRTPPAVAPPAAETGGESLLTVLIALGVNAVIAVVKSIVGAVTGSAAMVAEAAHSWADA
+GNEVFLLLAERRAGRAPDARHPLGYGRAAYVWSMVAAFGLFAVGSAVSVWHGITAWSAPE
+EEAEYTIAYIVLAVAFVLEGISFLNAHRRVRRDAERRHISDATFLRQTSDPTLRAVWVED
+ASALIGLAIAAAALALHQLTGDPRWDAAGSILVGVLLGVVAIFLLSRNMAFLVGEVADPV
+IRTRVLRWLLERPEVLSVSYLHLEYVGPEKLFVVGAVDLAGDERESEAAVLLQRVEDALL
+EHPRVAAVVLSLSNPAHAPLAPESQNTRV
+>2_1197
+MSHSDDIRPSVAAHPDDGDATSDPALAPPQAEDRPEGLVTVVIALAVNVAVAVVKSVVAA
+LTGSAAMVAEASHSWADAGNEVFLLVAERRAARPADARHPLGYGRAAYVWSMVAAFGLFA
+VGAAVSVWHGITAWSAPEEEGGGHLIGYVVLAVAFVLEAVSFGNAHRRVSAGAQEHRVSR
+SRFLARTSDPTLRAVWAEDSAALVGIGIAAAAIALHQLTGDARWDAAGSILVGVLLGAVA
+VFLLSKNMAFLVGEVADPAVRVRVLRWLLERPEVLSVSYLHLEYVGPGRLAVVGAVDLAA
+DEVESLAAVALQRVEDALLAHPVVAAAVLSLSNPSHAPLRLEDEEAAARR
+>3_1260
+MTRTPPAVAPPAAESGGESLLTVLIALGVNTVIAVVKSIVGAVTGSAAMVAEAAHSWADA
+GNEVFLLLAERRAGRAPDARHPLGYGRAAYVWSMVAAFGLFAVGSAVSVWHGITAWSAPE
+EEAEYTIAYIVLAVAFVLEGISFLNAHRRVRRDAERRHISDATFLRQTSDPTLRAVWVED
+ASALIGLAIAAAALALHQLTGDPRWDAAGSILVGVLLGVVAIFLLSRNMAFLVGEVADPV
+IRTRVLRWLLERPEVLSVSYLHLEYVGPEKLFVVGAVDLAGDERESEAAVLLQRVEDALL
+EHPRVAAVVLSLSNPAHAPLAPESQNTRV
+>4_1465
+MTRTPPAVAPPAAESGGESLLTVLIALGVNTVIAVVKSIVGAVTGSAAMVAEAAHSWADA
+GNEVFLLLAERRAGRAPDARHPLGYGRAAYVWSMVAAFGLFAVGSAVSVWHGITAWSAPE
+EEAEYTIAYIVLAVAFVLEGISFLNAHRRVRRDAERRHISDATFLRQTSDPTLRAVWVED
+ASALIGLAIAAAALALHQLTGDPRWDAAGSILVGVLLGVVAIFLLSRNMAFLVGEVADPV
+IRTRVLRWLLERPEVLSVSYLHLEYVGPEKLFVVGAVDLAGDERESEAAVLLQRVEDALL
+EHPRVAAVVLSLSNPAHAPLAPESQNARA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001961.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001961.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b3ca32cc0b549ff34df5a2919fcbbf81d01ca686
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001961.fa
@@ -0,0 +1,20 @@
+>1_1722
+MTRVPPAHGHRPALRDSTGSAHGPGVEPGARPRLSAEDLLAARDALAPFGRLSRQEPIEW
+AAEEPLAPDLADFYRYVGPEWLEIDTLGLPVMFFPLDRLWDEQAGYRWNPRTGALLVDWN
+DDWTVVAKQGADPFIHAASTGQVLMAPGDEGWEDRLDEPRPVFRDLTEMTRALAAVGTAW
+ARFDDPFTADWHLTEEVTAAVVAGLEGVLGAHDRAVDLARALGYLGAV
+>2_1001
+MDRHLLPAGPGEVTPRPRIALDPARLHAARAALSVFGPVHRQEPIEWAAEEPLAPDLAEF
+YREVGPDWVEIDTLGLPLLMFPLERLWDEQAGYRWNHRTGAMLADWNEDWTVVAKQGAEP
+FIHEAATGHVLMAHGEEGWEDRLGEPVPVFRDVAEMTLALCAAGAAWAGSDDPFTADWHV
+RPEVTSAVVDGLEQVLGDRARAVDVARRLGHLRAA
+>3_1439
+MTRVPPAHGHRPALRDSTGSAHGPGVEPGARPRLSAEDLLAARDALAPFGRLSRQEPIEW
+AAEEPLAPDLADFYRYVGPEWLEIDTLGLPVMFFPLDRLWDEQAGYRWNPRTGALLVDWN
+DDWTVVAKQGADPFIHAASTGQVLMAPGDEGWEDRLDEPRPVFRDLTEMTRALAAVGTAW
+ARFDDPFTADWHLTEEVTAAVVAGLEGVLGAHDRAVDLARALGYLRAV
+>4_1651
+MTRVPPAHGHRPALRDSTGSAPGPGVEPGARPQLSAEDLLAARDALAPFGRLSRQEPIEW
+AAEEPLAPDLADFYRYVGPEWLEIDTLGLPVMFFPLDRLWDEQAGYRWNHRTGALLVDWN
+EDWTVVAKQGADPFIHAASTGQVLMAPGDEGWEDRLDEPEPVFRDLAEMTRALAAVGTAW
+ARFDDPFTVDWHLTEEVTTAVVAGLEAVLGAHDRAVDLARALGYLRAV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001965.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001965.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4d01420262219ac61dc3f380b63c4db37535fb4a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001965.fa
@@ -0,0 +1,24 @@
+>1_1853
+MTTTTPLPPLDGATTPAQARERFRAGLVRPTSGIADGYAQANLVSIPQDHAYDVLLFAQR
+NPQALPLLGVFEAGEVNGPALDGDVRTDVPQYVVYRDGVETDRPTDLLDVWRDDLVTFVI
+GCSFTFESALVAEGIRMAHQDAGVNVPMYRTTRRCASAGRLSGPLVVSMRPLPADRVADA
+VRITSRYPAVHGAPVHVGDPAGLGITDLSAPDFGDAVEVPQGHLPVFWACGVTPQAAIME
+SRPPLAITHAPGHMLITDLPDRMFQVP
+>2_863
+MTALHGGTGPAEARERFRAGLVRPTAGIADGFAQANLMVVPQDLAWDVLLFAQRNPKALP
+LLGVLEAGEVRGPAVDGDVRTDVPQYVVYEDGVPVGRPTDLLEVWRDDLVTFLIGCSFTF
+ESALVAEGIRIAHQDAGVNVPMYRTTRRCVPAGRLSGPLVVSMRPIPADRVADAVRITSR
+YPSVHGAPVHVGDPAALGIADLSAPDFGDAVEVPPGHLPVFWACGVTPQAAVMESRPPLA
+ISHAPGHMLITDIPDRTFQIP
+>3_1560
+MTTTTPLPPLDAATTPAQARERFRAGLVRPTSGIADGYAQANLVSIPQDHAYDVLLFAQR
+NPKALPLLGVFEAGEVNGPALDGDVRTDVPQYVVYRNGVETDRPTDLLDVWRDDLVTFVI
+GCSFTFESALVAEGIRMAHQDAGVNVPMYRTTRRCASAGRLSGPLVVSMRPIPADRVADA
+VRITSRYPAVHGAPVHVGDPAGLGITDLSAPDFGDAVEVPQGHLPVFWACGVTPQAAIME
+SRPPLAITHAPGHMLITDLPDRMFQVP
+>4_1774
+MTTTTPLPPLDGATTPAQARERFRAGLVRPTSGIADGYAQANLVSIPQDHAYDVLLFAQR
+NPQALPLLGVFEAGEVNGPALDGDVRTDVPQYVVYRDGVETDRPTDLLDVWRDDLVTFVI
+GCSFTFESALVAEGIRMAHQDAGVNVPMYRTTRRCASAGRLSGPLVVSMRPLPADRVADA
+VRITSRYPAVHGAPVHVGDPAGLGITDLSAPDFGDAVEVPQGHLPVFWACGVTPQAAIME
+SRPPLAITHAPGHMLITDLPDRMFQVP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001971.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001971.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4b73bd763c6b8fdeb3185f82afdce2a2ff93021b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001971.fa
@@ -0,0 +1,32 @@
+>1_1985
+MTTKDSRTRSLIDVDVLEYHRLLTPEQQEKLGEIRAALAEIVTPHVAEAWSRDEFPHEIA
+RRVGELGYNHISGMTEDPLFRGHLMAELARADISLSVYFALHNDLVGATLEALGSEEQKQ
+TWLPGLYAMEYTGCFALTEPEHGSDVAGGMATTARREGDEWVINGAKRWIGNGTMSRIAI
+VWARDEEDDQVKGFIVETDTPGYEATKIEHKTAVKIVQNADITFTDVRIPAENKLEKANT
+FADTNVILLGSRNGLGWQAVGAQQGILDAARRYALERTQFGRPIAGHQLVQSLLVQIAAN
+LAATLGMAHRAVQLEAAGEVSMTQASLVKLKTSQMCRESAALGRQMMGGNGILADVGLGR
+FFCDVEAIFTYEGTYEVNSLIVGRGLTGHSAFL
+>2_716
+MTTTDSRTRSLIDVDVLEYHRLLTPEQQEKLTEIRAALAEIVTPHVAEAWSRDEFPHEIA
+RRVGELGYNHVSGMTEDPLFRGHLMAELARADISLSVYFALHNDLVGATLEALGSEEQKQ
+TWLPGLYAMEYTGCFALTEPEHGSDVAGGMATTARREGDEWVINGAKRWIGNGTMSRIAI
+VWARDEEDDQVKGFIVETDTPGYEATKIEHKTAVKIVQNADITFTDVRIPAENKLEKADT
+FADTNVILLGSRNGLGWQAVGAQQGILDAARRYALERTQFGRPIAGHQLVQSLLVQIAAN
+LAATLGMAHRAVQLEAAGEVSMTQASLVKLKTSQMCRESAALGRQMMGGNGILADTGLGR
+FFCDVEAIFTYEGTYEVNSLIVGRGLTGHSAFL
+>3_1702
+MTTTDSRTRSLIDVDVLEYHRLLTPEQQEELTEIRAALAEIVTPHVAEAWSRDEFPHEIA
+RRVGELGYNHISGMTEDPLFRGHLMAELARADISLSVYFALHNDLVGATLEALGSEEQKQ
+TWLPGLYAMEYTGCFALTEPEHGSDVAGGMATTARREGDEWVINGAKRWIGNGTMSRIAI
+VWARDEEDDQVKGFIVETDTLGYEATKIEHKTAVKIVQNADITFTDVRIPAENKLEKANT
+FADTNVILLGSRNGLGWQAVGAQQGILDAARRYALERTQFGRPIAGHQLVQSLLVQIAAN
+LAATLGMAHRAVQLEATGEVSMTQASLVKLKTSQMCRESAALGRQMMGGNGILADVGLGR
+FFCDVEAIFTYEGTYEVNSLIVGRGLTGHSAFL
+>4_1920
+MTTTDSRTRSLIDVDVLEYHRLLTPEQQEKLTEIRAALAEIVTPHVAEAWSRDEFPHEIA
+CRVGELGYDHISGMTEDPLFRGYLMAELARADISLSVYFALHNDLVGATLEALGSEEQKQ
+KWLPGLYAMEYTGCFALTEPEHGSDVAGGMATTARREGDEWVINGAKRWIGNGTMSRIAI
+VWARDEEDDQVKGFIVETDTSGYEATKIEHKTAVKIVQNADITFTDVRVPAENKLEKANT
+FADTNVILLGSRNGLGWQAVGAQQGILDAARRYALERAQFGRPIAGHQLVQSLLVQIAAN
+LAATLGMAHRAVQLEAAGEVSMTQASLVKLKTSQMCRESAALGRQMMGGNGILADVGLGR
+FFCDVEAIFTYEGTYEVNSLIVGRGLTGHSAFL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001972.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001972.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6cadac3f29fd2e270aad44cc76c920bf475ffbd8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001972.fa
@@ -0,0 +1,56 @@
+>1_1987
+MSEHMITWDQDADGVVTLTMDDPQARVNTMNERYQDAMDAVVDRLEAERDTVTGVVLTSA
+KKTFFAGGDLDSLAQAGPEDVESVFALTQRVKGQLRRLETLGRPVVAAINGTALGGGLEI
+ALACHRRIAVDDPGLKVGLPEVTLGLLPGGGGITRLVRMVGVERALMEWLLQGTARDARA
+AMEKGIIDEVVTDPADLVPAAKRWILEHRDDADAAAKPWDVKGFRIPGGTPAQASFASRL
+PAFAATLRRQLHGADLPAPKAILSAAVEGSQVDFDTASRIETRYFVSLVTGHTSSAMIQA
+FHSDMQALRSGAALGGPSRERSTITTAAVLGAGMMGVGIAHALALNGVDVMLKDVSLEAA
+ERGRERVGALLEGRVAKGRMSREDADAVLARVQPTEDYQDLAHVDAVIEAVFEDVELKDS
+VFAEVEKVVGPDTLLCSNTSTLPITLLQGPRERSQDFIGLHFFSPVDRMKLVEIIRGEQT
+SQRTVERAYDLVQQIRKLPILVNDGRGFYTSRVYGTLVLEAAALVEEGVDAQRIERAARH
+AGFPASPLAMMDEVSLTLIQHIRREEEKAVAEAGGERPVRPGERVVERMVDEFGRPGRAQ
+GAGFYEYPEEGPKHLWPGLAEHFATGADVPEQDLQDRLLYRMAIETARCFDDGVLTDAPS
+ANLGGVFGIGFPPHTGGPVTFMTHREGGPAAFVARADELADRYGERFRPGDTLRQRAERG
+EGPGR
+>2_714
+MTENTITWDQDAEGVVTLTMDDPTAKVNTMNGHWQESMRAAVERLEQERESITGVILTSA
+KKTFFAGGDLDQLGPSGPEDAEDVFAMTEHVKSLLRRLEKLGRPVVAAINGAALGGGLEI
+ALACHRRVAVDDPRIKVGLPEVTLGLLPGGGGITRLVRMLGLEKALMDWLLQGTQYRPAQ
+AKEKGVIDELVSSPEELLPAARRWILEQGAAAAKAREGGPEETDEALGAPSYAVKPWDRK
+GFRLPGGTPQQPQLASRLPAFAATLVKTLHGADLPAPRAILSAAVEGAQVDFDTASRIET
+RYFTSLVTGRVSTAMVQAFHTEMGAIRAGAGLGERVSERHTIATAAVLGAGMMGAGIAHA
+LATSGIDVVLKDVSKENAERGKAHCADLVGKAVARGRMDQSAADEVLGRIRTTDDYADIA
+GVDAVIEAVFEDFDLKSEVFAEVEKVVGRQTLLCSNTSTLPITQLQGPRERAADFVGLHF
+FSPVDRMKLVEIIRGEQTSQETVERAYDLVQQIRKVPILVNDGRGFYTSRVFGTLVLEAA
+AMVEEGVDPQRVERTARQAGFPGAPLAMLDEVSLTLTQHVRREAEKAAEAAGTERAEQPG
+ERVVDRMVEEFDRPGRARGAGFYEYPAEGPKHLWPGLREHFAAEVDVSDEDLKDRFLYRM
+ALETAACFEAGVLTDTASADIGGILGIGYPPHTGGPATFATNRPGGLADFVSRADALADA
+YGERFRPSDWLRERAAAGQGLA
+>3_1704
+MSEHMITWDQDTDGVVTLTMDDPQARVNTMNERYQDAMDAVVDRLEAERDTVTGVVLTSA
+KKTFFAGGDLDSLAQAGPEDVESVFALTQRVKGQLRRLETLGRPVVAAINGTALGGGLEI
+ALACHRRIAVDDPGLKVGLPEVTLGLLPGGGGITRLVRMVGVERALMDWLLQGTARDARA
+AMEKGILDEVVTDPADLVPAAKRWILEHRDDADAAAKPWDVKGFRIPGGTPAQASFASRL
+PAFAATLRRQLHGADLPAPKAILSAAVEGSQVDFDTASRIETRYFVSLVTGHTSSAMIQA
+FHSDMQALRSGAALGGPSRERSTITTAAVLGAGMMGVGIAHALALNGVDVMLKDVSLEAA
+ERGRERVGALLEGRVAKGRMSREDADAVLARVQPTEDYQDLAHVDAVIEAVFEDVELKDS
+VFAEVEKVVGPDTLLCSNTSTLPITLLQGPRERSQDFIGLHFFSPVDRMKLVEIIRGEQT
+SPRTVERAYDLVQQIRKLPILVNDGRGFYTSRVYGTLVLEAAALVEEGVDAQRIERAARH
+AGFPASPLAMMDEVSLTLIQHIRREEEKAVAEAGGERPVRPGERVVERMVDEFGRPGRAQ
+GAGFYEYPEQGPKHLWPGLAEHFATGADVPEQDLQDRLLYRMAIETARCFDDGVLTDAPS
+ANLGGVFGIGFPPHTGGPVTFMTHREGGPAAFVARADELADRYGERFRPGGTLRQLAERG
+EGPGR
+>4_1922
+MSEHMITWDQDADGVVTLTMDDPQARVNTMNERYQDAMDAVVDRLEAERDTVTGVVLTSA
+KKTFFAGGDLDSLAQAGPEDVESVFALTQRVKGQLRRLETLGRPVVAAINGTALGGGLEI
+ALACHRRIAVDDPGLKVGLPEVTLGLLPGGGGITRLVRMVGVERALMEWLLQGTARDARA
+AMEKGIIDEVVTDPADLVPAAKRWILEHRADADAAVKPWDVKGFRIPGGTPAQASFASRL
+PAFAATLRRQLHGADLPAPKAILSAAVEGSQVDFDTASRIETRYFVSLVTGHTSSAMIQA
+FHSDMQALRSGAALGGPSRERSTITTAAVLGAGMMGVGIAHALALNGVDVMLKDVSLEAA
+ERGRERVGALLEGRVAKGRMSREDADAVLARVQPTEDYQDLAHVDAVIEAVFEDLELKDS
+VFAEVEKVVGPDTLLCSNTSTLPITLLQGPRERSQDFIGLHFFSPVDRMRLVEIIRGEQT
+SPRTVERAYDLVQQIRKLPILVNDGRGFYTSRVYGTLVLEAAALVEEGVDAQRIERAARH
+AGFPASPLAMMDEVSLTLIQHIRREEEKAVAEAGGERPVRPGERVVERMVDEFGRPGRAQ
+GAGFYEYPEQGPKHLWPGLAEHFATGADVPEQDLQDRLLYRMAIETARCFDDGVLTDAPS
+ANLGGVFGIGFPPHTGGPVTFMTHREGGPAAFVARADELADRYGERFRPGDTLRQRAERG
+EGPGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001976.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001976.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4e036a786c1d3d692ff43e045b9d732bb0a869db
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001976.fa
@@ -0,0 +1,16 @@
+>1_2110
+MTDIRRTATALTLGAAVVTGLGAPAAVAQTTAPATETATTAPASESPAPQEEEKDDNGNW
+GLWGLAGLLGLAGLAGRRKREVHAEPVRRDHHVAGAHRDHDVHRVDDRAGDVRTEGADAR
+RREADGTLGDATRRPGTGDAR
+>2_490
+MADIRKTATALTLSAAVLVGAGAPAATAAESSTAPATETATTAPASSQSPEPEQTEEKDD
+NGNWGLWGLAGLLGLAGLAGRGKKREVVHAQPVREAPRVQPTHTENHHVDTTRVQDGVRD
+AGHRAGGTDGTPGNGR
+>3_1835
+MTDIRRTATALTLAAAVVTGLGAPAAVAQTTAPATEAATTAPASESPAPQEEEKDDNGNW
+GLWGLAGLLGLAGLAGRRKREVHAEPVRRDHHVGGAHRDHDVHRVDDRAGDVRAEGADTR
+RPGTGDAR
+>4_2056
+MTDIRRTATALTLGAAVVTGLGAPAAVAQTTAPATETATTAPASESPAPQEEEKDDNGNW
+GLWGLAGLLGLAGLAGRRKREVHAEPVRRDHHVAGAHRDHDVHRVDDRAGDVRTEGADAR
+RREADGTLGDATRRPGTGDSR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001979.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001979.fa
new file mode 100644
index 0000000000000000000000000000000000000000..39df39134ae48fca90e0711a7edf5d5ae39bc8d5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001979.fa
@@ -0,0 +1,20 @@
+>1_2163
+MTLMWGAVAASSLLVGAVLATLHRWHMGTIGLVLAFGAGALIASVSFELAEAGVQAAGPA
+AVGIGLTLGAAAYFLGDRAVERSAARSGGSSSGAALTVGALLDGIPEQLVLGIGLAAGEG
+VSLALLVAIFMSNLPESIAATADSLDGGKRRRHLLIQWSLVTVVCALATWGGGLIADVAS
+PALTGGIQGFAAGALLVMLIDTMIPEAREKGGEKAGLLTVVGFALGAFLSLVV
+>2_1205
+MTQILLWGVVSASSLLLGALLALARDWHRPTIGRILAFGAGALIASVSLELAEEGVNTGG
+AVAVGVGLALGAAAYFTANRVVERRGGGSGGGSGAALTVGALLDGIPEQVVLGVGLAAGG
+EISLALVVAIFVSNLPEAIGSSADLLRAGKTRRHVLTQWSVVTVVCILATVVGGLLAELA
+TPGMTAGVQGFAAGALLVMLIDTMIPEAREQGGETAGLVTVVGFALACGLSLLG
+>3_1889
+MTLMWGAVAASSLLVGAVLATLRRWHMGTIGLVLAFGAGALIASVSFELAEAGVQAAGPA
+AVGIGLTLGAAAYFLGDRAVERSAARSGGSSSGAALTVGALLDGIPEQLVLGIGLAAGEG
+VSLALLVAIFMSNLPESIAATADSLDGGKTRRHLLVQWSLVAVVCALATWGGGLIADVAS
+PTLTGGIQGFAAGALLVMLIDTMIPEAREKGGEKAGLLTVVGFALGAFLSLVV
+>4_2102
+MTLMWGAVAASSLLVGAVLATLRRWHMGTIGLVLAFGAGALIASVSFELAEAGVQAAGPA
+AVGIGLTLGAAAYFLGDRAVERSAARSGGSSSGAALTVGALLDGIPEQLVLGIGLAAGEG
+VSLALLVAIFMSNLPESIAATADSLDGGKTRRHLLIQWSLVAVVCALATWGGGLIADGAS
+PALTGGIQGFAAGALLVMLIDTMIPEAREKGGEKAGLLTVVGFALGAFLSLVV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001990.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001990.fa
new file mode 100644
index 0000000000000000000000000000000000000000..10c4dbe9652b2e7f1e7939a8e9ef6c45b20ab9d4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001990.fa
@@ -0,0 +1,21 @@
+>0_200
+MKPGWTTVALGDVAEVRRTSVHPAHMRPDDPYLGLENIERGGRLLSVSTVAGEGVKSTKF
+RFSPGDVLYGKLRPNLAKILKVDFEGLCSTDILPIAVNSGTLSADFLAYYLSQPQVVAQA
+ASRASGANLPRLAPAEFLALRIPLPPLDEQRRIAAALDRATVVIGGIGDLRRRTRSIGES
+VVQQSSTGAGRWSTIGKSLTLRSGSTLPATRRRPGGVPVYGANGAIGEHDEATHEQPHVT
+IGRVGAVGAVNVTAGRAWISDNALIVVKAPEHLSNGYLAIALAMADLGRFASQSAQPLIT
+QRKVADVPLWIPSQAEALRIDAILDRLAEVERANVERVARADALFASLQSRAFRGEL
+>1_1567
+MTLPANSIRIIEANNWVSAETAARMKLKLTPPGAVAFAKIGEGLKAERLRRITVPTAMDN
+NMMAAIPKPAVVDSGFLIYLIESVHIAEWAQGSALPYLSQKLLADIPVHVPSLPEQRAIA
+ATLGAFDDKIESNRQAMATGESLIRAVVESTLDASEGEDGTLGDYCALVKAPVEIDKIDP
+DDNYIGLEHMPRGSIFLTEWKKAKGLGSNKTAFKRGDLLFGKLRPYFKKVGIAPIDGVCS
+TDILVVRPKSPRDIALVTAVAASDALIDSLSASSTGTRMPRASWKDLAAWRVPVLTATER
+IELSARVDPLVERLTQLTFESHRLVALRDALLPELLSGGLRVPVTS
+>4_181
+MKPGWTTVALGELCELKYGKSLPAKARSGEGFPVFGSSGLVGAHEKAIQRGPGIIVGRKG
+SIGEVHWSEDDFWPIDTTYFALPRRANVDLRWLYLALRWLPLKTLNKAAAVPGLNREDAY
+RLTLALPPLDEQRRIAAILGTSLHSIGCRVRACIWIDDFLDNVYNSTLRSGDIPRRPIRS
+LGEVSTGKTPATSKADYFGGVIPFVAPGDLGGLVSAKRTLTDLGAQESRLVRAGATMVCC
+IGATIGKVGIVAEQSAFNQQINAIEWGPDMDDLYGYFTMRAQSDVVAARGSSTTMPILAK
+SKFEELLIPVAPFEVQEEFARVASIVSRVRSNLVAAWEAERQLFASLQSRAFRGEL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001992.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001992.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8bbe8ac549cbbc95a09098a2b5c9d06c6bd2e9a7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001992.fa
@@ -0,0 +1,33 @@
+>0_255
+MATRLRQRLLSAAALTAAGALLITGCAESQRDSGGSAGGSGSNGDAAQVDGSFIFAASSD
+PKTLDPAFASDGESFRVSRQIFEGLVGTEPGTADPAPLLAESWESSEDGLTHTFKLKEGV
+TFHDGEPFNGEAVCANFDRWYNFTGIQQAETVSYYYGKLFRGFADAPENAVYESCEANGD
+AEATVTLAQPFAGFIASLSLPAFAMQSPKALEEYKADEIGGSAESPQMSEYARAYPTGTG
+PYKFDSWSVGEDIKLSAYEDYWGEGGDVTDITFRVIDDPVARRQALEAGDIDGYDLVAPA
+DTQALSDAGFNVVARDPFTILYLGLNQQQEELKDVKVRQAIAHAIDKEALIGQTLPEGTE
+PATQFIPKSVNGFSEDVTKYEYDPEKAKQLLAEAGYADGFTIDFNYPTGVSRPYMPTPEQ
+VFSNLSNQLSQVGIQVEAKPAKWSPDYLNQVQGTADHGLHLLGWTGDYNDTDNFVGVFFG
+QEKPEFGFDNPELFSALEEARGVPTLEEQTPMYEEINKQISDFVPAIPLAHPAPSLAFDK
+RVASYPASPVNDEVFTEIDLTE
+>3_2078
+MATRLRHRLLSAAALTAAGALLVTGCAQSQRDGGGSGGSGGGDAAQVDGSFIFAASSDPK
+TLDPAFASDGETFRVSRQIFEGLVGTKPGTADPAPLLAESWESSEDGLTHTFQLKEGVTF
+HDGEPFNGEAVCANFDRWYNFTGIQQSETLSYYYGKLFRGFADKPEDAVYKECEATGEHE
+VKITLAQPFAGFISSLSLPAFAMQSPKALEEYKADEVGGTAESPQMSEYARAHPTGTGPY
+KFESWSVGEDVKLTANEDYWGEGGEVTDITFRVIDDPVARRQALEAGDIDGYDLVAPADT
+AALSEAGFNVVARDPFTILYLGLNQEKEELQDVRVRQAIAHAIDKDALIAQTLPEGTEPA
+TQFIPKSVNGYSEDVTTYEHDPAKAKALLAEAGYPDGFTIDFNYPTGVSRPYMPTPEQAF
+SNLSSQLAEVGITVNAKPAKWSPDYLDQVQGTSDHGIHLLGWTGDYNDTDNFVGVFFGQE
+KPEFGFTDEELFSALEEARQIPTLEEQTPKYQEINEQISEIVPAVPLAHPAPSLAFDKRV
+ASYPASPVNDEVFNEIDLTE
+>4_119
+MATRLRHRLLSAAALTAAGALLVTGCAQSQRDGGGSGGSGGGDAAQVDGSFIFAASSDPK
+TLDPAFASDGETFRVSRQIFEGLVGTKPGTADPAPLLAESWESSEDGLTHTFQLKEGVTF
+HDGEPFNGEAVCANFDRWYNFTGIQQSETLSYYYGKLFRGFADKPEDAVYKECEATGEHE
+VKITLAQPFAGFISSLSLPAFAMQSPKALEEYKADEVGGTAESPQMSEYARAHPTGTGPY
+KFESWSVGEDVKLTANEDYWGEGGEVTDITFRVIDDPVARRQALEAGDIDGYDLVAPADT
+AALSEAGFNVVARDPFTILYLGLNQEKEELQDVRVRQAIAHAIDKDALIAQTLPEGTEPA
+TQFIPKSVNGYSEDVTTYEHDPAKAKALLAEAGYPDGFTIDFNYPTGVSRPYMPTPEQAF
+SNLSSQLAEVGITVNAKPAKWSPDYLDQVQGTSDHGIHLLGWTGDYNDTDNFVGVFFGQE
+KPEFGFTDEELFSALEEARQIPTLEEQTPKYQEINEQISEIVPAVPLAHPAPSLAFDKRV
+ASYPASPVNDEVFNEIDLTE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001995.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001995.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7969fed7983904c3985c7cfb0948e81be5305270
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001995.fa
@@ -0,0 +1,9 @@
+>0_508
+MTQNAPALTVYGADWCRDCLRTKRQLDELGVAYDYVDLVADPAQADVAERISGRKNIPVV
+VFPDGEHQVEPTNEETAQKLTALGLL
+>3_1878
+MSQNDLTVYGADWCRDCLRTKRQLDELGVAYDYVDLVADPAQADAAERISGRKNIPVVVF
+PDGDHQVEPTNEETAAKLTALGLI
+>4_2094
+MSQNVLTVYGADWCRDCLRTKRQLDELGVAYDYVDLVADPAQADAAERISGRKNIPVVVF
+PDGDHQVEPTNEETAAKLTALGLI
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001996.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001996.fa
new file mode 100644
index 0000000000000000000000000000000000000000..127598bd33f02c18700046e949078a49878f9e0b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001996.fa
@@ -0,0 +1,22 @@
+>0_514
+MVGIKDVARMAGVSAATASRALTGSGPVASSTRTRVQEAVAALGYVPDAAASSLASGRTR
+NIGLVTPSVHRWFFAAVLEGAADELVRRRYDLTLYDVGQDHDRRSAVLTDLLPRRRLDAL
+VTLSFRLSPFELDGLARLGRPVVAVGGRLPSGEALPEWFTAVQVDDARAARMATGHLIEL
+GHREIAYMGRVADDIEFQVSTERTRSFLDALAAAGLRTPADWMLPADFTIGDAYHRARAL
+LADPEHRPTAVLCISDEMAMGTLMAAQSLGLRVPEDVSVMGLDGHPDAARLGISTVDQTP
+VDQGRRAVRLALGALDGTPTRPASSTTWPCNPGRAPRRRERRAGSRPRRRRPPSTPPSPR
+IVGHVPARERTPPWPP
+>1_2151
+MVGIKDVARMAGVSTATASRALTGSGPVAAATRTRVQEAVATLGYVADSAASSLASGRTR
+NIGLVTPSVHRWFFAAVLEGAADELVRHGYDLTLYDVGQDPERRSTVISDLLPRRRLDAL
+ITLSFRLSVFEFAGLERLGRPVIAIGGRLPAGETLPDWFTAVQVDHARAARMATEHLLEL
+GHRDIAYVGRVDEDIEFQVSTERTRGFLHALAATGVRTPADWMVPADFTIGGTYHQARAL
+LADPRRRPTAVMCISDEMAMGTWMAAHSLGLRVPEDVSVMGLDGHPEAARLGISTVDQNP
+LEQGRRAVRLALGALDGAAHPHRIMHHLALRPRASTAPP
+>3_1875
+MVGIKDVARMAGVSTATASRALTGSGPVAVATRTRVQEAVATLGYVADSAASSLASGRTR
+NIGLVTPSAHRWFFAAVLEGAADELVRHGYDLTLYDVGQDPERRSTVISDLLPRRRLDAL
+ITLSFRLSMFELAGLERLGLPVIAVGGRLPAGETLPDWFTAVQVDHARAARMATEHLLEL
+GHRDIAYVGRVDEDIEFQVSTERTRGFLHALAATGVRTPADWMVPADFTIGGTYHQARAL
+LADPRRRPTAVMCISDEMAMGTWMAAHSLGLRVPEDVSVMGLDGHPEAARLGISTVDQNP
+LEQGRRAVRLALGALDGAAHPHRIMHHLALRPRASTAPP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001998.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001998.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a0290f71cf4dc5c23d012e8888fc9db9ae12d570
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0001998.fa
@@ -0,0 +1,33 @@
+>0_516
+MSTSSTTSARPDAPHEDPADAGRRGLRGRRADRGPDGTAGTLVKIALLGLVDAFAAFVLF
+QLAAAGDWVVFAVTLAVTLLINWIYLRRGGLPAKYLAPGVFFLVLFQVFVVVYSSYIAFT
+NYGAGHNSDKPAAIEIIQRSSSIRVPDSPVYPVSVLEQGGDLHLLTVRDGQAVLGGADEP
+LAPVEAQMDGAEAVAVDGYTTLKFGDLLSRQDQVTQLKVPLSDDPADGTLETRDGSRAYV
+YSPRLEYDEAQDTFTDLESGVVYRDNGEGRFQADDGSTLQTGWRVFVGVDNFAKAFTDPS
+LRDPLLRVLVWTFAFAFLSVVTTFALGLLLAIAFNRADMRGKNVYRVLMILPYAFPAFLS
+GLVWAGLLNPEFGFVNNVFFGGADIPWLTDPWLARFSVIVVNLWLGFPYMFLVTTGALQS
+LPEDVDEAARMDGAGPWRIFRSIKLPLLLVSVAPLLISSFAFNFNNFNIIYMLTGGGPRF
+ADAATNIGATDLLITVVYKTAFSGVGRDYGLASALSIVIFLIVATISAISFRQTKALEEI
+DS
+>1_2149
+MSPSSTASDRSDAATAALDDAARRTGPGRRRRADARGTEGLGGTLAKIVLLGLVDAFAAF
+LLFQLAAAGDWVVFALTLAVTIGINWIYLRRGGLPAKYLAPGLFFLMLFQVFVVVYSSYV
+AFTNYGAGHNSDKAAAIEIIQRSSSIRVPDSPVYDITVLEEGGDLYLLTLRDGEPVLGGA
+DQALEPVEAQMQDGEPVGVEGYTTLRFGDLLQRQDQVARLKVPLSDDAADGTLETRDGSR
+GYVYAPRLEYDEARDTFTDLESGVEYRDNGEGQFQADDGSTLQTGWRVFVGLDNFTRAFT
+DPELRDPLLRVTVWTFAFAFLSVATTFAVGLLLAIAFNRSDMRGKKVYRVMMILPYAFPA
+FLSGLVWAGLLNPEFGFVNTVFFGGADIPWLTDPWLARLSVLVVNLWLGFPYMFLVTTGA
+LQSLPEDVDEAARMDGAGPWRIFRSIKLPLLLVSVAPLLISSFAFNFNNFNIIYMLTGGG
+PRFPDAGSNIGATDLLITVVYKTAFSGVGRDYGLASALSIVIFLIVATISAISFRQTKAL
+EEIDK
+>3_1873
+MSPSSTASDRSDAATAALDDAARRTGPGRRRRADARGTDGLGGTLAKIVLLGLVDAFAAF
+LLFQLAAAGDWVVFALTLAVTIGINWIYLRRGGLPAKYLAPGLFFLMLFQVFVVVYSSYV
+AFTNYGAGHNSDKAAAIEIIQRSSSIRVPDSPVYDITVLEEGGDLYLLTLRDGEPVLGGA
+DQALEPVEAQMQDGEPVGVEGYTTLRFGDLLQRQDQVARLKVPLSDDAADGTLETRDGSR
+GYVYAPRLEYDEARDTFTDLESGVEYRDNGEGQFQADDGSTLQTGWRVFVGLDNFTRAFT
+DPELRDPLLRVTVWTFAFAFLSVATTFAVGLLLAIAFNRSDMRGKKVYRVMMILPYAFPA
+FLSGLVWAGLLNPEFGFVNTVFFGGADIPWLTDPWLARLSVLVVNLWLGFPYMFLVTTGA
+LQSLPEDVDEAARMDGAGPWRIFRSIKLPLLLVSVAPLLISSFAFNFNNFNIIYMLTGGG
+PRFPDAGSNIGATDLLITVVYKTAFSGVGRDYGLASALSIVIFLIVATISAISFRQTKAL
+EEIDK
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002003.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002003.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f44c044603b2a4b1bdbbcc309dea2a0685ce6765
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002003.fa
@@ -0,0 +1,29 @@
+>0_671
+MTETSNSPMTARVRAFLDRPHRLLIGGEWVDAASGKTFETRDPATGEVLATVAHAEQADI
+DAAVAAARAAFDEGSWVRMRPNVREDLLWRISNLITERLEDFALLESLDQGKGVGIASAF
+DVRAAADCFRYYAGWPSKLQGAVNAPSMLLAPPEAEFHSYTRREPVGVCGQIIPWNFPLL
+MAAWKIAPALATGNTVVLKPAEQTPLTALMLGELLTEAGVPAGVVNIVTGHGDAGAALTA
+HPDVDKVAFTGSTEVGKKIVGAAAENLKKVSLELGGKSPNIVFADADIDAAVDGSLMGFT
+LNSGQACESGTRVFVHADVYDRFNEALAAKMRQMSIGPGTEDAAITPLVSQEQLDRVMGF
+VEEGKRDGAVALTGGQRYGDAGFYVEPTLFTETTPEMSIVREEIFGPVAVSVKFTDEDEV
+IRAANDSVYGLAAALWTRDVSRAHRVAARLKAGTVWVNTFHALDSQLPFGGFRQSGWGRE
+LGAESLELYTQVKSVTIAL
+>0_805
+MTETLTYADLLAAVVAPEGAGTEIKDPATGDLIGYAPQSTTADLDAAVELARTAQRDWAK
+LSHAERSAALNRAADAIEANSAALAELLSREQGKPVKNGPNAAFEVGGCVAWTRATAGFE
+VQPETIVDDETGRAELHWMPIGVVGGIGPWNWPMMISVWQIAPALRMGNTVVLKPSEYTP
+LSVLGLVHVMNQALPEGVLQVLAGDGELGRAFTSHDGIDKITFTGSTATGKAIMKGAADD
+LKRLTLELGGNDAGIVLDDADPKAIAEGLFWGAFINTGQTCAALKRLYVPDSLYDAVCEE
+LVAVARRMPMGPGLEEENVLGPLQNRAQYEIVERLVQAAKDGGGRVLLGGDPDPERPGLF
+YPTTIVADIDNDNPLVAEEQFGPALPIVRYTDLEQAIEWANGLDVGLGASVWSADPERAK
+EVAMRLEAGSVWINKHGTIDPRVPFGGVKHSGMGREFGVLGLKEMAEAKSISV
+>3_1747
+MTETSNSPMTARVRAFLDRPHRLLIGGEWVDAASGKTFETRDPATGEVLATVAHAEQADI
+DAAVAAARAAFDEGSWVRMRPNVREDLLWRISNLITERLEDFALLESLDQGKGVGIASAF
+DVRAAADCFRYYAGWPSKLQGAVNAPSMLLAPPEAEFHSYTRREPVGVCGQIIPWNFPLL
+MAAWKIAPALATGNTVVLKPAEQTPLTALMLGELLTEAGVPAGVVNIVTGHGDAGAALTA
+HPDVDKVAFTGSTEVGKKIVGAAAENLKKVSLELGGKSPNIVFADANIDAAVDGALMGFT
+LNSGQACESGTRVFVHADVYDRFNEALAAKMRQMSIGPGTEDAAITPLVSQEQLDRVMGF
+VEEGKRDGAVALTGGQRHGDAGFYVEPTLFTETTPEMSIVREEIFGPVAVSVKFTDEDEV
+IRAANDSVYGLAAALWTRDVSRAHRVAARLKAGTVWVNTFHALDSQLPFGGFRQSGWGRE
+LGAESLELYTQVKSVTIAL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002004.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002004.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5357cc7c0ba99173df5209937a73ada13953b8fd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002004.fa
@@ -0,0 +1,32 @@
+>0_675
+MVSNRLEAESGWRRSQLHGVRADDALTTTTLDVRARAAALDHAVATTLADVARDFAGLDL
+FLFAADRSGRLIRLVGPWKSALGEQIRRRGLDVGVCLAEEAAGFNGIGAALELGRGVAVD
+GEEHYLDAFRAFSCFGVPLAHPGVGRVHGALNVVTFAGATPTLVEGLARHLGRQIEQALG
+AATYADELRLLTEFRRLTRGRGSAVVGVGEESILLNAAAERLVRHLDGSELRALAVRARR
+GELDGGDVGVAGGFSVADVSEASGMTLMRLERAATETTPRPTPGAGRGTWAPAVEAAREA
+RGSVSVIGEPGSGRTAAARRIAGPDAVILEVGRAQTPEDTTWLRGLEALVRRPGPAVVVD
+DVDALEPRLLPGLRRALRQGRCRIVMTAQVQPTTDVSAVLALTEHRVQLSPLRRRLAEFP
+ALLAALAAQVHGASAPTFSPEAVRVLAQQHWPGNLVELEYVVGRVGRRAGGGRVTAAELP
+ASHRGEGTVPLLGLERAEREAIIDALESAGGNKVRAAAALGVSRATLYRRLRTLRITQEG
+>0_792
+MAPEPPQADPERIRRARHELAARGLIAGSVPPALVGEQIEQSWRRSVAHEVSLDAVPQGG
+ADLDPALPLRRAAETVVRRWAEGLGQLRVSLVVADATGRILVRRALDTRDEDALDAARAA
+VGYGFGEQDLGTNGLGTPLQVKGDVYISGAEHFTDGLAGLTCAGTPVLDPVTGRAVGALA
+VASRADEAHPLMLGVARQAAAEVMEALRDETAGPDLEIARAFRGLRGPDRAVLVMSADTV
+MTDLPGLARIDAQTQAVLWETLRRRSPGEEPVRLSLPGLEGEALARRLPGAEAAYALEFD
+AVPAPEPALGRAAAAPRSGPPAGGGPERGAGTAPSVGVHPSEMAVAYDGIGDALTAAAEQ
+TGLVELTGPRGSGKRFQAVRWLRDRALAAGTADAPDPLHVELADVTGPQGEDLLRRVAAR
+GRAVVVAGTLPTAAETAQARAGLRTTVARVVLEHPEAPRVVLLRSVDASAEDDVAGQVRL
+PALAEVPQDIPALLARLSERLHPGAPPPRFSPEALQRILAWPWPDNMAGLSRLVSLLPGL
+RRGATVQVEDLPAALRAGPGSRLTRMEQAERDAIVAALREHGGNRSAAAAALGIGRATLY
+RRLKALRITV
+>3_1745
+MVSNRLETESGWRRSRLHGVRADDTLTTATLDVRARAAALDHAVATTLADVARDFAGLDL
+FLFASDRSGRLIRLVGPWKSALGEQIRRRGLDVGVCLAEEAAGFNGIGAALELGRGVAVD
+GEEHYLDAFRAFSCFGVPLAHPGVGRVHGALSVVTFAGATPTLVEGLARHLGRQIEQALG
+AATYADELRLLTEFRRLTRGRGSAVVGVGEESILLNAAAERLVRCLDGSELRALAVRARR
+GELDGGDVGVAGGFSVADVSEASGMTLMRLERAATETTPRPTPGAGRGTWAPAVEAAREA
+RGSVSVIGEPGSGRTAAARRIAGPDAVILEVGRAQTPEDTTWLRGLEALVRRPGPPVVVD
+DVDALEPRLLPGLRRALRQGRCRIVMTAQVQPTTDVSAVLALTEHRVQLSPLRRRLAEFP
+ALLAAMAAQVHGASAPMFSPEAVRVLAQQHWPGNLVELEYVVGRVGRRAGGGRVTVAELP
+ASHRGEGTVPLLGLERAEREAIIDALESAGGNKVRAAAALGVSRATLYRRLRTLRITQEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002006.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002006.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4ee86b05a995a797cf298f5f5107aaaf4812b35d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002006.fa
@@ -0,0 +1,25 @@
+>0_719
+MEDVHARAVIDASGTWTTPNPLGQAGLPAPGEAEALAAGQITAPLPDVLGADQARFAGQH
+VLVVGAGHSAANTLLELGTLAQDTPGTRISWAVRSADVARVYGGEDRDELAARGALGTRL
+RHLVETGTIQVHPSFTITAFTTTGLGMMVQASTPAGEEHLVVDVVVPATGFRPALGMLSE
+LRLELDPAVEAPRQLGPLIDPEFHSCGSVTPHGEKMLAHPEPGFYIAGMKSYGRAPTFLM
+ATGYEQVRSIAAALAGDRTAADNVELQLPETGVCSTDLGGSCDAPAPATAADTADQGCCA
+PAPQTLPAPASRLPVLLPVQAATCC
+>1_2012
+MLTTSTTSHPVAIIGAGPIGLAAAAHLAERGLPFLILEAGTAAGAAIAEWGHTRLFSPWQ
+YNLDAAAQRLLEAAGWTAPDADVLPTGHELREHYLEPLAQLPQLAESIRYGARVTAVSRA
+GIDKTRTARREETPFLVRIQTTDGHSEDVLASAVIDASGTWSTPNPLGQAGLLAPGEQQA
+RAAGHITAPLPDVQGRDRDRFAGKRVMVTGAGHSAANTLLDLADLEADTTIIWAARTADL
+TRVYGGGDQDELAARGALGSRLRQLVDSGRIAVLTSFTITRFRADDTLTVHAVTPDGERE
+VSVDVLVPATGFRPDLGMLSELRLALDPAVEAPSQLEPLIDPEFHSCGSVEPHGERVLAH
+PETNFYIVGMKSYGRAPTFLMATGYEQVRSIAAALAGDRKAADAVHLELPETGVCTTDLG
+GGCDAPATAGDACCSSPQLIELPLGR
+>4_1941
+MLTTATNPHPIVVIGAGPIGLAAAAHLAERGLPFLILEAGTAAGAAIAEWGHTRLFSPWQ
+YNLDAAAQRLLEADGWTAPDADALPTGHELREQYLEPLAQLPQLAESIRYDARVTAVSRA
+GIDRTRTTRREETPFLVRIETADGHSEDVLASAVIDASGTWSTPNPLGQAGLLAPGEQQA
+HAAGHITAPLPDVQGRDRDRFAGKRVMVTGAGHSAANTLLDLADLEADTTIIWAARTADL
+TRVYGGGDQDELAARGALGSRLRQLVDSGRIEVLTSFTITRFRADDTLTVHAVTPDGERE
+VSVDVLVPATGFRPDLGMLSELRLALDPAVEAPSQLGPLIDPEFHSCGSVEPHGERVLAH
+PETNFYIVGMKSYGRAPTFLMATGYEQVRSIAAALAGDRKAADAVHLELPETGVCTTDLG
+GSCDAPAPAGDACCSSPQLIELSVGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002007.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002007.fa
new file mode 100644
index 0000000000000000000000000000000000000000..50024a160106c59be55a93b6574a7c99709ecde0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002007.fa
@@ -0,0 +1,26 @@
+>0_743
+MTLAHPASRPMPATSPATPGATPPDPAARLVPLRGADHAAVLAEAVRVRASGGIPVVGDE
+RWPAALMAAQVEHAAATLRDLAVRDPRAAAEIAWAAFTSGSTSRPRVVLRTEASWRAGHR
+VAADWLGLRPGEELLVAVHPVSSMAVHAASLCGALGARLRVTARARLSAADLAGPVVLDA
+TPSQLVDALDLLDDGAPSTLRVALIGGDRLPAGARDRAAAHGIRVAHFYGSAEASFVAVD
+LDGAGLRPLPDVRLRIADGADDAGPAGPNTPDPNTPRARTGLLELRSDQLAAPDDSRLSS
+GAPRWREDGWLTTGDRATWDPDAGVLEVHGRADDVILTAGATVAAADVEAELAAARDGSG
+RPVASGVLVVGVPDRRLGERVCAVVEPARGQDPEAALQMLKTAARAGLSPAARPRRWVLV
+DRLERTGSGKIRRALPAATRHAAGRQDHA
+>2_706
+MSPLAPVPDPAARLAFLADADHAAVLAEAVAVRARGGVPVVGDERWPADLRAAQREHAVV
+QLRRLAARDPDLAARVGWAAFTSGSTSRPRVVLRTDDSWRAGHPHVAAWLGLAPGEAMLT
+AVHPVSSMALHAAAWCAATGHRLAVSPHARLTAADLTGPAALTATPSQLTDALDLLDDGA
+PSTLRVALVGGDRLPAGARERAAAHGLRTVHYYGAAEASFVAVDLDGSGLRPLPGVELEV
+AEPDVLADADGPRTGVLRVASPQLAVPDDSRLASGAPRWDAEGRLTTGDRVTWDPAAGIL
+TVHGRADEVVLTAGATVSAADVEAELAAVAGPDGRPVAAGVLVLGVPDPRLGQRVAAAVE
+PAPGVAPEDALAALQGVARARLSPAARPRRWVAVGRLERTGSGKIRRVTPPELRP
+>4_1933
+MIPPVRLPPSDDDVAPAVSRLAPLRGADHEAVLRRALEARTAGLVPLVGDERWSVAQWQA
+GVGHAEALLAELTARAPDRAARIGWAAFTSGTTGRPRVILRTADSWRTGHRLVEDWLGLE
+PGESLLVPVHPVSSMAVNAADLCAHVGARLLVPSRARLRAADVTGGAAAVHCTPAQLADL
+CDLLAAVRAASAPAGPRVVLVGGDRLPGQLRERAAALGLRVVHYYGSAEASFVAVDPDGS
+GLRALPGVRLEIREGVLHVRSDQLAEPDGTRLTDGTPRWGADGWLCTGDRAQIDDDGVLH
+LRGRADDAILTGGATVIPAEVEAELLRATVRRESTASGGDSAPHAVPVCTAVLVQGEPAP
+RLGSLVVAHVEPAPGLPADVVLAALKEHARTHLPPAARPRRWQVVDRLERTGSGKIRRMA
+PDVAAIPDPPGGSA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002008.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002008.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e325c16bc6121a0c3b95ce05006f4dce6e688458
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002008.fa
@@ -0,0 +1,20 @@
+>0_744
+MVASALTGGDPALPGIGPVAAVREVLDAAGIALAEVAVVEVVEAYAAQVWAVLDELGLSA
+EAGAARADDWGVDPRVNAEGGALAFGHPWGASGAVAATHAVRRLQSCPPGSSALVTCAVG
+GGMGVALVLDVA
+>2_707
+MSAVGLDAAPVWITAVSRTPVTARSRAQAHLGAGELAAGPVGEVAAGTHPAAVVLGNGAG
+PGGNVARIAALAAGLGVATPGWTVDAQCGAGLVAVAQAAGHAVATGRACVGGGVESPSTA
+PERSIDGVSYAQAPMVPAGWDDPGMTAAADALAAARGIGRARQESFAARSHVLALAGGLR
+LPDDDGPRRLDAAALARFRAVTPGADPATAVTGATAARIADGAAAVLVTPHSAVVRETDG
+VSTASVRGVDVLRPCRVLSWSLTGVDPALPGLGPVSAVRDALDAAGRTLEGVAVVELVEA
+YAAQVLAALDDLGLTGASGTSAPGASGPATAHDPWGVDPRVNAAGGALALGHPWGASGAV
+AVVHAVRRLQAEPPGAVGLAACAVGGGMGAAMVLEVA
+>4_1932
+MTTTPGLWITAAARTAFTARSRGQAGLDAGALSAQAVAAVTGPAAADVAAVVLGNCTGPG
+GNLGRIAALAAGLGEHTPGWSVDAQCGAGLAGVLQAAQHAAFTGRPCVGGGVESPSTAPQ
+RSRDGVPYTQAPMVPSGWPDPGMTAAADALAAADAMPRARQEAFAARSHALALAAAGLRR
+IERVPGAPDDDGPRRLDARALARFTPVHPDADPAAAVTGGTAARIADGAAAVLVVPCERS
+PVGRDEPAGGLRPVRIVGAEIRGGDPALPGIAPVAAVERALAAADWRLGEVAVVEVVEAY
+AVQALATLDRLGLTDHARPGPASLGSDRQGLDDWGVDRRVNAAGGALALGHPWGASGAAA
+VVRAVHRLQGQPPGARAVVACAVAGGLGITMLLEVA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002010.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002010.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f43abf93ddc91eaa666e46c8c8b449b821134547
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002010.fa
@@ -0,0 +1,30 @@
+>0_758
+MSPTTHAAATFHSNDVSKQFIAGQWRDGAAGSTKQDLNPYDDAVVAEFALASEADLDEAY
+RAAADAQKEWAAVAPAKRAAVLRRAAELLEERRAEIVDWLVKESGSTVIKANIEVSLAVG
+ITQEAASFPTRVHGTIHPSNTPDREMRVYRKPIGVVGVISPWNFPLHLSQRSVAPALALG
+NAVVIKPASDTPVTGGTLIARLFEEAGLPAGVLSVVVGAGSEIGDAFVKHPVPRLISFTG
+STPVGKQVGANAVSGDHIKKVTLELGGNAPVVVLDDADLDAAVEQSVTGGYLHSGQICMS
+VQRVIVDEKVYDEFLPKYEGAVKSLKFGDPREEGVLVGPVVNDQQLETLKKKIASAEADG
+ARALVSGEIEGRVVPPFLWVGAEPDMEIARDEIFGPMTVVLKARDEAHALELANDHEFGL
+SSAVFTQDLDRGLRFADGLAAGMSFINEMTVQDEAHVAFGGARNSGLGRFNGEWAIEEFT
+TAHTIGVKRLG
+>1_1981
+MTPTTSTPATFHDTRVDQQFIAGQWRDGASGDRASDINPYTDDVVAEFALATAEDLDEAY
+RAAAAAQEEWAAMPPKDRAAVLRRAAEILEERRDEVIDWLVKEAGSTRIKADSEVSLAIA
+ITQEAASFPTRVHGKIFDSNTPNRETRVYRKPIGVVGVISPWNFPLHLSQRSVAPALALG
+NAVVLKPASDTAVTGGTLIARVFEEAGLPAGVLSVVVGSGSEIGDAFVTHPVPRLISFTG
+STVVGKQVAANAVTGDTIKKVALELGGNAPLVVLDDADLDAAVDQAVLGGYLHSGQICMS
+VQRVIVDESVYDEFLPKYEGAVKALKVGDPAEEGVLVGPIINDSQVESLRKKIASAEADG
+ARALVGGEIQGRVVPPFVWVDATADMDIAREEIFGPMTVVLKAHDEAHALELANDHEYGL
+SSAVFTQDLDRGLRFANGLAAGMSFINEMTVQDEAHVAFGGARNSGLGRFNGEWALEEFT
+TDHTIGVTRVG
+>2_726
+MTPTTHASGTFLGNDVGKQFIAGQWRDGAAGSTKQDVNPYDDSVVAEFALASEADLDEAY
+RSAAEAQKGWAETGPKERAAVMRRAAELLEEHRDEVVDWLVQEAGSTVIKANIEVSLAIA
+ITEEAATFPTRVHGKIFDSNTSNRESRVYRSPIGVVGVISPWNFPLHLSQRSVAPALALG
+NAVVIKPASDTPVTGGTLIARLFEQAGLPAGVLSVVVGAGSEIGDAFVKHPVPRLISFTG
+STPVGKQVAANAVLGENIKKVALELGGNAPLVVLDDADLDTAVEQAVTGGYLHSGQICMS
+TQRVIVDAKVYDEFLPKYEQAVKALKVGDPRGEGVLVGPIINDSQVEGLQKKIASAEADG
+ARALVGGEVEGRVVPPFVWVDVDPDMEIAKEEIFGPMTVVLKARDEEHALELANHHEFGL
+SSSVFTQDTGRGVRFAQRVAAGMTFVNEMTVQDEAHVAFGGARNSGLGRFNGEWAVEEFT
+TDHTIGVTTVG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002011.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002011.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d769117b4d1ea399f349546ce6302ef55a38b2de
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002011.fa
@@ -0,0 +1,20 @@
+>0_759
+MRMSRGVEATWTDYLRAIQSLNPSGVFSHATAARIWEMWIPGRLFEDPRVHLAKERGRGG
+RTSRPGLVMHQLQPDAPVIEYRGLRLTAPAWTWVDLAHHLSVEDLVVAGDSLLPSPHGAE
+ARRLGHLPPRATTVDEMRRLAHARKNVRGIVRARAVLDLLRTGADSPPESRLRHRLHEAG
+FPEPQVNPPIRLSAGETVRVDLAWEELRLCLEFDGDQHRTDRAQWQRDRARRRGLEADDW
+AVTWVAGEVFTRGGWPRFVGDLSRLIRRQAARHGTVLPPRLPGE
+>1_1980
+MPRPLAPLATSLPTILTVPEGREAGLSRARLRAPDLVAIGHGLRMSRDVEATWTDYLRAV
+QSLNPSGVFSHATAARIWGMWIPGRLLEDPRVHLAKERGHGGRTSRSGLVMHQLQPDAPV
+IEYRGLRLTAPAWTWVDLAHHLSVEDLVVAGDSLLPSPHGAEARRLGHLPPRATTVDEMR
+RLAHARKNVRGIVRARAVLDLLRTGADSPPESRLRHRLHEAGFPEPQVNPPIRLSSGETV
+RVDLAWEELRLCLEFDGDQHRTDRAQWQRDRARRRGLEADDWAVTWVAGEVFTRGGRPRF
+VGDLSRLMRRQATRRGAVLPPGLPGE
+>2_727
+MADPSRATPPRLVTTATLRSRGVAPWELRRREYTGRGRSLWGAAGVEFTLLDHVRALQEL
+HPTGVFSHATAARLWGMWLPRDLLQEPSVDIAKVKGRGGWPSREGIRGHHLDPAAQVVRL
+HGVRVTSPAWTWVDLAARLSVEDLVVAGDSLLPDEHGATARSLGRLPCRASTVAELRRTA
+ATRKNVRGVVRARHVVGLLREGADSPAESRLRHRIVEAGFPEPEVNPALRLHDGRIVRPD
+LCWRALRMCLEFDGDHHRTERAQWQEDRARRRGLEADGWSVTWVAGEVFTRAGWGRFRGD
+LAATMRRQAHQEGVVLPPSLPGEEASLW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002015.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002015.fa
new file mode 100644
index 0000000000000000000000000000000000000000..23eb29af0b34a09fe5d1da5a1902bd36d7a520d9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002015.fa
@@ -0,0 +1,15 @@
+>0_806
+MSARTEFDPAALGDRETTLLVKSLLIPRPIAWVGTLSADGVPNLAPHSFFTVASSEPPIV
+LIGSAGRKDTLRNAEATGEFTVSLVTRALAEAANRTSAPFAPEVDEFAAASLTPEPSVVV
+GPPRVAASPAALECRLHEVHPVGDSFLLMGRVVHVSVDTDVLTTDARGRTLPDPAALGPV
+SRLGRMEWGGLGEVFELERPSAG
+>2_147
+MKYRPQHEANPLPFSPFKSSTVPRPIGWLSSVSTDGRENIAPYSQWQNLTFDPPMVMFSA
+NQYPDGRRKDTVLNAEQTGWFVWNMATYDLREAVNVSAMALEPSESEWDRIAEHGVTKVY
+ADNHPIPMVAESPVRFECRYHSTHRIKGDSNVGTIDVVFAHVDTIHIDDDVITADGRIDI
+PRIQPIARLGYFDYTVVRETFEMRVPGADGDAQAGLEGRA
+>3_2129
+MKYRPQHEANPLPFSPFKSSTVPRPIGWLSSVSTDGRENIAPYSQWQNLTFDPPMVMFSA
+NQYPDGRRKDTVLNAEQTGWFVWNMATYDLREAVNVSAMALEPGESEWDRIAEHGVTKVY
+ADNHPIPMVAESPVRFECRYHSTHRIKGDSNVGTIDVVFAHVDTIHIDDDVITADGRLDI
+PRIQPIARLGYFDYTVVRETFEMRVPGADGDAQAGLEGRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002019.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002019.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7f33f42b1b590703eb0fb823f6f4598147c0b039
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002019.fa
@@ -0,0 +1,15 @@
+>0_824
+MRIDENSERDAQGRLIPTPGQTIGPFFGYADGYEQVHLPFRDGQNLVPPGRADALRLTGT
+VYDGNGDPIPDAMLEIWQADAQGVISQEDGSLVRDGFTFTGWGRATVDNVGTYTFSTVEP
+GATGEGTARFISMVVFARGLLNKLHTRVYLPEDTEALAADPLLQSLPEERRRTLIAERLD
+DGSLRFDVWIQGRGEHADKETVFLQFPGIEYPQHD
+>3_1659
+MRIDETTERTADGRLVPTPGQTIGPFFGYANGYEQVHLPWRDGHQLVPAGRADAMRLFGT
+VYDGNGDPIPDAMIEIWQADAEGVISQEDGSLVQDGFTFTGWGRCAVDNAGRYTFSTVEP
+GVVNEDRARFIHVVVFARGLLNKLHTRVYLPEDAEAIVQDAFLTSLDEDRRRTLIGTRND
+DGSLEFDIWIQGPGEHAPKETVFLQFPGIEYPELD
+>4_1877
+MRIDETTERTADGRLVPTPGQTIGPFFGYANGYEQVHLPWRDGHQLVPAGRADAMRLFGT
+VYDGNGDPIPDAMIEIWQADAEGVISQEDGSLVQDGFTFTGWGRCAVDNAGRYTFSTVEP
+GVVNEDRARFIHVVVFARGLLNKLHTRVYLPEDAEAIVQDAFLTSLDEDRRRTLIGTRND
+DGSLEFDIWIQGPGEHAPKETVFLQFPGIEYPELD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002020.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002020.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b2030fab675862a326d536be0071833f7686c4ab
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002020.fa
@@ -0,0 +1,15 @@
+>0_878
+MTLTTRDAQTWEQMWLPLWPLASDDLRAGIYRTARKDARGKRYIEANPQALSNLLVVDVD
+HEDALMRALWGRHDWLPNAVVENPTNGHAHAVWALAEPVTRTEYAQRKPLAFAAAVTEGL
+RRSVDGDAAYSGLITKNPQHASWHTSWTSDRLYSLGELASRLEEAGHMPAPAWRRSRRQN
+PVGLGRNCSIFETARHWAYREAKRIRQRHEHATAEDSRDYYAAVLAHVHELNAAFSEPLP
+ANEARDIAASIHRWVTTRFYGWTDARTVQQATLSTLQAVRGRKGGTKSGEKRRSTVEDRA
+RLIVGEDA
+>0_1289
+MDARETQAWGQMWLPLWPLASDDLKAGIYRTPRATARGRRYIEANPQALSNLLVVDVDHE
+DALMRSLWDRRGWLPNAVVENPENGHAHAVWALGRV
+>0_1291
+MVKTIVRHALAEPITRTEYARRKPLAFAAAVTEGLRRSVDGDKAYSGLMTKNPEHTSWNT
+SWISNELYSLGQLAEHLDTAGFLPAPSWKRTRRRRPVGLGRNCSIFETARVWAYRELRHH
+WGDPEGLRVAIVERVHELNAEFSEPLPAREALDIAHSIHRWITTQSRMWQDGPVVYEATF
+TAMQSARGRKGGAKSAEKRRAVVEDRARLIVGENA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002022.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002022.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cd55f107801c3e955ee0cceb1158e2f97c824c97
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002022.fa
@@ -0,0 +1,36 @@
+>0_1056
+MTTATPRQPLIEDHAYLSNQHSGALLTREGDVTWLCLPRFDAPSVFTSLLGEPEHGRWSL
+RIADGEVRERAYLPGTLVLRTRWRGPDGEAEVLDFMPLTSHRGSGRAHDDDAGALADEGE
+AARADLVRLVRCTSGSVSVDQCLQFRMDYGEVVPWVSRQTDPADESFLAVVAGGDALAVH
+GPDLRPDSTAHRGRTRLEAGQSAAWTLAWYPSWSMAPAAPDPERALEATVTDWVEWLGEP
+LATGPRADRVARSLLVLKGLTHRDTGGIVAAPTASLPEDFGGVRNWDYRYVWLRDTALTL
+EALMAHNHTDDACAWRDWLLRAIAGDPRDVQIMYTLSGERRMPERDLEHLPGYEGSRPVH
+VGNGAADQWQADVIGTVMLALGRLRDAGVDEDRWSWTLQKRLVERVLEHRDTKEHGLWEM
+RGEPAYFTHGRVMMWAALDQALHAARDHGLPAEDEELAAWEQARDELREEILTEGVGPSG
+GFRQTYGSEETDASLLQIPHTGFLPHDDPRMLATVADVERDLVTETGLVMRYRASGMDGL
+PGEEAPFMMCGFWLVEQYARSGRLADAERLMARLDECSNDLFLMAEEYDDGRDRMAGNFP
+QAFSHLGLIRAVDALEEARGAAGGEG
+>2_992
+MTAQTAPASPLIEDHAYLSNQHSGALVTRAGDVTWLCLPRFDGPSVFTSLLGAPEHGQWS
+LGIADGEVVERAYLPGTLVLRTRWRGPEGEADVLDFMPLADHAGSGVVDADDVGILMGEG
+EGPLRRADLVRLVRCTSGTVEVDQWIRARLDYGEVTPWVSRQEDPAGEEFLAVVAGGDAL
+AVHGPDLRPDGMRHRGSTRLEEGRSQAWTLAWYPAWTTAPAAPDAEHALEKTVTGWVEWL
+GDPRARGPRAERVARSLLVLKGLTHENTGGIVAAPTASLPEDIGGVRNWDYRYVWLRDTS
+LTLEALMAHNHTDDAAQWRDWLLRAIAGEPKDNIQIMYTLSGERRMPERELGHLPGYEGS
+TPVNVGNGAADQWQADVIGTVMLALDRLRDAGVDEDQWSWPLQKRLVERVLAHRDTKEHG
+LWEMRGEPAYFTHGRVMMWAALDRALHGVREHGLDATEEETAEWERVRDELREEILTEGV
+QEDGAFRQTYGSDETDASLLQIPHTGFLPHDDPHMLATVAQVERDLTTETGLVRRYRATG
+MDGLPGEEAPFMMCAFWLVEQYARSGRVEDAERLMARLDDCANDLFLMAEEYDDDRGRMA
+GNFPQAFSHLGLIRAVDALEECAEDARAAE
+>4_1660
+MSAQPRIDDHAFLSHQLSGALVSREGAITWLCLPRFDSASVFTSLLGTREHGEWSLGIED
+GEVAERAYLPGTLVLRTLWRSPSGVAEVLDFMPLLDADGVGDAQGDDGGPDGTGASEAAP
+RADVMRLVRCLAGRVRVTQSVFARLDYGEVEPWVSRQEDADGESFLAVVAGGDALAVHGP
+DLEPVDGHHEGTTELVAGESAQWCLTWYPAWGMAPSAPRAEDVLEATVRRWRGWLEESTR
+QAPRADDPLADRVQRSLLVLKGLTHRATGGIVAAPTTSLPEDIGGVRNWDYRYVWLRDTA
+LALEALLAYGHVEVATAWRDWLLRAIAGEPHEVQVMYTLSGERYMPERELEHLPGHADSR
+PVVVGNGAADQWQADVIGTVMMALCALRDAGVPEDEWSWPLQKRLVERVVAHREDPDHGL
+WEMRGEPAFFTHSRVKMWAALDRALHAVATHGVPATEAETAAWERHRDELREEILTRGVH
+ADGHFTQAYGSDAVDASLLQIPHTGFLPPDDPRMLATVRRIEEELVTDTGLVLRYRPDGS
+DGLPGEEAPFLACAFWLVEQYARTGRLDDADALMERLDACANDLDLMAEEYDDGQDRMAG
+NFPQAFSHLALLRAADALALVRAGDGAGEAGD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002024.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002024.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6ed6fcf65786668e368a0e30b56f1a599e3890cb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002024.fa
@@ -0,0 +1,14 @@
+>0_1190
+MSKLRMLSRMPKKGRFMFIISGGDRARYMSRKGLVRGMGENVWFQPRALPNDPNLIRFHN
+NIVVASGVTFVAHDVINLMIGRKNGVRLPVNEDCIEVMDDVFIGSGSVILPGVGIGPRAI
+IAAGTVVTKDVPPDSIVRGVPAKRLGDFSVLEAQRLADAGRFDGMTRAQIDDVLWE
+>1_855
+MSGNVFTAASADVAEDAVLGDGTKVWHLAQVREQARLGERCIVGRAAYIGTGVELGDDCK
+VQNLALVYEPARLGRGVFIGPGVVLTNDTYPRAVNPDLSQKSGDDWEAVGVDIGDGAAIG
+ARSVCVAPVRIGEWALVAAGSVVTRDVPDFGLVAGVPAKRIGWVGRTGRRLEEKDGVWVC
+PDTGETFIERDGALRPAEPAQEEENHG
+>3_586
+MSGNVFTAASADVAEDAVLGDGTKVWHLAQVREQARLGERCIVGRAAYIGTGVELGDDCK
+VQNLALVYEPARLGRGVFIGPGVVLTNDTYPRAVNPDLSQKSGDDWEAVGVDIGDGAAIG
+ARSVCVAPVRIGEWALVAAGSVVTRDVPDFGLVAGVPAKRIGWVGRTGRRLEEKDGVWVC
+PDTGETFIERDGALRPAEPAQEEENHG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002026.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002026.fa
new file mode 100644
index 0000000000000000000000000000000000000000..eb13d5af8811683a653db5978cf4c462ef00fbe8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002026.fa
@@ -0,0 +1,24 @@
+>0_1253
+MQRIIVIPDSFKGALSSREAGSAIAAGLASVTDAEVLVVPIADGGEGTVEAFVAAAGGAL
+RSATVCGVFYGERVPVHYGLIDPDVAVVETASCAGLPLASGREDTGRATTFGVGEQILDA
+VSAGARRVIVGAGGSATTDGGTGAAAALGVRFLDVAGEEFVPTGDTLTRIARIDSTPARD
+RLRDVDVEVMCDISNPLTGPQGAAHVFGPQKGADPAAVASLDTGLVHLAGLVERDLGVAI
+DALPGSGAAGGLAGGLHAFIGATLKPGIDVVLETAGFHDLVKTADLVITGEGRIDGQSLA
+GKVPIGVAQAVRAADRAIPVIVLAGSVGQDADTLYDEGITAIVPIGRGPQDLATAIRRTA
+EDLTATARDVGRLVMACSPARLTR
+>1_1564
+MQRIIVIPDSFKGALSSREAGSAIAAGLASVTDAEVLVVPIAYGGEGTVEAFVAAAGGAL
+RSATVCGVFYGERVPVHYGLIDPDVAVVETASCAGLPLASGREDTGRATTFGVGEQILDA
+VSAGAGRVIVGAGGSATTDGGTGAAAALGVRFLDAAGEEFVPTGHTLTRIARIDSSPARD
+RLRDVDVEVMCDISNPLTGSQGAAHVFGPQKGADPASVASLDTGLVHLAGIVERDLGVAI
+DALPGSGAAGGLAGGLHAFIGATLKPGIDVVLETAGFHDLVKTADLVITGEGRIDGQSLA
+GKVPIGVAQAVRAAGRAIPVIVLAGSVGQDTDTLYDEGITAIVPIGRGPQDLATAIRRTA
+EDLTATARDVGRLVMACSPAGLRR
+>2_1161
+MQSIIVIPDSFKGALSSREAGSAIATGLASATDAEVLVVPIADGGEGTVEAFVAAAGGAL
+RSATVCGVFYGERVPVHYGLIDPDVAVVETASCAGLPLASGREDTGRATTFGVGEQILDA
+VSAGARRVVVGAGGSATTDGGTGAAAALGVRFLDVAGEEFVPTGDTLIRIARIDSTPARD
+RLRDVDVEVMCDISNPLTGSQGAAHVFGPQKGADPASVASLDTGLVHLAGIVERDLGVAI
+DALPGAGAAGGLAGGLHAFIGATLKPGIDVVLETAGFHDLVKTADLVITGEGRIDGQSLA
+GKVPIGVAQAVRAAGRAIPVIVLAGSVGQDADILYDEGITAIVPIGRGPQDLATAIRRTA
+EDLTATARDIGRLVMACSPAGLTR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002030.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002030.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3e682bc7f4aa11a76fdb0892942bf954166be322
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002030.fa
@@ -0,0 +1,9 @@
+>0_1548
+MTRARLEGAVMDLLWDHAEGLTAAEVRTLLHREGAPPALTTVHTALTRLAAKGRVRPAEG
+GRPRRFRAAVTREAHTAELLRDLLGSAPDREAVLAAFVGGISETDSAALRRLLD
+>1_1266
+MTRARLEGAVMDLLWDHAEGLTAAEVRTLLHREGAPPALTTVHTALTRLAAKGRVRPAEG
+GRPRRFRAAVTREAHTAELLRDLLGSAPDREAVLAAFVGGISETDSAALRRLLD
+>2_1444
+MARARLEGAVLDALWDHPDGLTAQELRVRLEREDGAPAVTTVLTALSRLTAKGHVRRVGA
+RRPQVFAAARTREQHAAGLLQDILGSSPDHEAVLAAFVGGISDADAAALRRLLT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002033.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002033.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fe930da4bd166f21a89dbdef2ea735aeb4f3adcf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002033.fa
@@ -0,0 +1,9 @@
+>0_1950
+MTATTHTLLRAEGFSCPSCVRKIEKAVDALPGVTGSKVHFETQRIEVDHDAERTSVQDLV
+DAVDRVGYRARPSVF
+>1_911
+MTATTHILLRAEGFSCPSCVRKIEKALDALPGVTGAQVHFETQRIEVDHDPQTTTAQDLV
+EAVAKVGYTARPSAF
+>3_639
+MTPTTRTLLRAEGFSCPSCVRKIEKALDALPGVTGAQVHFETQRIEVDHDPQTTTAQDLV
+EAVAKVGYTARPSAF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002034.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002034.fa
new file mode 100644
index 0000000000000000000000000000000000000000..15212030bf73e61524aba10cfcc0043926e1874b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002034.fa
@@ -0,0 +1,15 @@
+>0_1951
+MRRELTLTPVGEAEPCAARVPLFAGLEPDQLRRVSALARPFALEPGDVLHLPGARTERLW
+VVHTGGLALSLTSPTGRERVVRMAGPGDSVGEQEFLTGAAARHGVRAVAPTRLCTFSHEE
+IAGLMAEHPGIGRRVMRTLAVRLADAERRLAQERQPVAARIAGHLLELPAVHASGTPTVL
+LTAPKKDVASLLGTTPEAFSRGLRRLVDDGVVAVDGPRVRLLDADALEGLAAG
+>1_910
+MRMDLPLAPMDEPEPCAARVPLFTGLDLEQLRRVSALARPLVLEAGDALHLAGDRTDRLC
+VVHSGRLALTLGSATGRERVVRMVEPGDSVGEHEFLTGEPARHGARAVAATRLCTFSHAE
+VARLLAEHPGIGGRVMRTLAVRLAEAEQRLAREHQPVTARIAGHLLGLPALRDEADLVVV
+LAAPKKDVASLLGTTPEAFSRGLRRLADDGLIAIEGPRVTLLDPDALEALAAE
+>3_638
+MRMDLPLIPVDEPEPCAARVPLFTGLDLEQLRRVSALARPIVLEAGDALHLAGDRTDRLC
+VVHTGRLALTLGSATGRERVVRMVEPGDSVGEHEFLTGEPARHGARAVVATRLCTFSHAE
+VARLLAEHPGIGGRVMRALAVRLAEAEQRLAWERQPVTARIAGHLLGLPALRDEADLVVV
+LAAPKKDVASLLGTTPEAFSRGLRRLADDGLIAIEGPRVTLLNPDALEALAAE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002041.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002041.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5663bcf76dd682dd92aad5b634a4437ed6bbf1b3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002041.fa
@@ -0,0 +1,17 @@
+>0_2378
+MSQPTAAGFRFYDAFNGSAADPSPHFNVARYRAHYPGPPTPGQAGCAISHFRVLESFASS
+LGHEDGVALVSEDDVLMPPETEAVLEGILKDDSFEIAVLADRGPTNPSLAFQRLLMTEAE
+LSLLSRPIVCGGRIRRLGRFEGNPYMAALYLVTRSGARKLASGLVDDAGGPWTIADDWPL
+FRDRYGLDIRVLRPGLVTYMGGSTTRDAESLARDALSAAGDGRPLTRLKTAVGLRSRSRA
+ARLVVRATLRDIATR
+>2_2223
+MPDIVDYRVIALADSTRLEGFLAQPLGRRFRPFEAVDARKGYGPEDFDAEGFEVRFGRPP
+LNGEVGCTLSHMSVLREFAVEDGAVTDVLVVAEDDARFSRFTSEVLNRLLETSAVRGLVV
+LADPYGPVDMRGRLGAPTLEDKLQQSLLRRRLRPLAGAPRFAVGRWSRGLVGTGFYLVSR
+DAAKYDIAWRLRHRRGGAR
+>2_2258
+MGQITDRYVISLEGSPRREAFFSQPGVADFVVWDAFDGRTGAGRDRFDVVAFERRAGRPP
+EGGEIGCTLSHAGLLADFAAGLGRPDDLMLVAEDDVVFTPDFEAVLGRVARTRGWGWTLL
+AQGLEDPFRDPFWAKSRDRAPQSLLAKPVGPPSSPWRYRLGNWDGELWGTGLYLVTREAA
+RALTDHATREGLSWAADDYVTWHAAAGVKVWILLPTIAGWVGESEINATTRPHLQIQSYA
+AHPMGRQAWSRRVSRFRAGARIAWKEMRGDTRPWAS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002043.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002043.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1931a9cd1c70b03d0bf45f6509d5718c62fb5a64
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002043.fa
@@ -0,0 +1,10 @@
+>0_2447
+MKRGNPYEQGCPTRHILDRIGDKWTVLIVGALGEESLRFSELRRRIEGISQKMLTQTLRA
+LEEDGLVMRTVYAEVPARVEYRLTEAGHSLRAPLEALEKWSITHLADVLHARTHYQT
+>1_433
+MVTMRQAGAKRGNPYEQGCPTRHILDRIGDKWTVLIVGALGEESLRFSELRRRIEGISQK
+MLTQTLRALEEDGLVTRTVYAEVPARVEYRLTEAGHSLRAPLQALEEWSITHLADVLHAR
+NHYQT
+>2_131
+MNRSWNPLLASCPSRTSLARIANKWTALIVIALAEGPLRFGGLHDGVDGISRKVLTDTLR
+DLERDGIVARTDHGGVPRRVEYELTALGRTLETPLAALVDWAAEHHDAVEAARVDYDERR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002047.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002047.fa
new file mode 100644
index 0000000000000000000000000000000000000000..616abcbbc8768cbd8d6bdb67204461f41674414e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002047.fa
@@ -0,0 +1,46 @@
+>0_2594
+MTVSMRVMSAGDGYKYLLKSIAAGDGDRSLSTPLTRYYAEAGTPPGFWMGSGLGRLGHGD
+LVEGGQVSEAQLALLVGMGHDPITGEPLGRAYQQFASITERIKQRVDALDPELGPATRAQ
+EVAAIEAEEAERGTRRAVAGYDFTFSVPKSVSTIWAVADAGTQALIADAHHAAVAELVAF
+LEREVAATRVGATGPDGAVAHVDVAGVVAAAFDHYDSRAGDPQLHTHVVVSNKVLTVQDG
+RWRTLAGRPMHSVVVAVSELYNAALADQLTRVLGVEWEARERGRDRNPAWEIEGVPDELV
+TEFSTRSRHIEAEKDRLIAGYVAKHGRQPSARTVLKLRAQATLATRPEKQVRSLADLTAE
+WRQRAGRVLRRDANGWARTFTASTADAPRRVLRADDVPLDVVREVGQTVMETVGEKRSTW
+TRWNLHAEASRQLMGWRFASIQDREAITGLVVDAAEHASLRLTPPELASSPLQFRRVDGT
+SRFRPHASTLFSSEVLLAAEDRLLARAATTAGPVVPLETVERIARKPDARGRVLGEDQAA
+ALAAIAVSGRVVDVLVGPAGAGETTAMNGLRRAWEKEHGTGSVIGLAPSAVAAQVLADDL
+GIATENTAKWWQNHLMYGTTFTAGQLVIIDEASLAGTMSLDRLTHEAEKAGAKVLLVGDW
+GQLQSPGAGGSFAMLVHARDDAPELTDLHRFTNEWEKTTSLQLRHGRAEAIDALIEHGRI
+TGGDEEAMIDAAYTEWRADLAAGRASILVTETHATVTELNARARADRIIDGTVNPTRELP
+LRDGTAVSEGDLVITRENDRRLRNGRTWVRNGSRWTVTGVREDGSVIIRPAGRRFGGGIV
+LPADYVAEHLDLGYAITAHRAQGVTTDTAHAVVTATTTRENFYVSMTRGAHSNHAYVTVD
+REDAEHAVPHPGDNPNVTARSILYGVLQHIGAELSAHETVAAEQDRWGSIAQLAAEYDTI
+AQAAQHDRWATLLAASGITAEQIEDVLGSDAYGALSAELRHAEANHHDLDALLPRLVAAR
+SLDDADDIASVLHARVARATARPAGSGRTRKAPRLIVGLIPHAGGQMADDMRRALDERRE
+LIEGRADAVLRGYLTDEEPWTADLGAAPRGDKQKAAWWRAARTVAAYRDRYGITDDRTPL
+GPTPESTSQKIDAIRARAALNRAQAIAHEGTTADAVRPATTSRPAPSL
+>2_1735
+MVWVTVSMRVMSAGDGYKYLLRTVAAGDGDRSLSTPLTRYYAEAGTPPGRWLGSGVTALG
+NGEIAPGAQVSEAQLQLLVGMGRDPITGVPLGRAYPVYSSTADRVADRVNQLDPALGAVE
+RGRRVAQIEAEEAARGSRRAVAGFDFTFSVPKSASVLWAVADAGTQALIAQAHHEAVAAV
+VAFMEREVAATRTGATAGDGAVAQVDVTGLIATAFDHFDSRAGDPHLHTHVVISNKARTV
+LDGKWRSLDGRPMHAAVVALSELHEAVFADHMTRTLGVSWEPREMGRDRNPSWAITDVPE
+ELAAEFSTRARQIEVEKDRLVAEYVATHGRQPSDATVIRLRAQATLGTRPDKQLRSLAEL
+TAEWRTRASQQLGVDATVWARTITVGERQMLLRADDVPLDLIGQVGRSVVEVVGEKRSTW
+RRWNLMAEAARQTMGWRFATVEDREAITAMVADAAEHASLRLTPPELTTSPVEFRRLDGT
+SVFRPKHSTVFSSDTLLAAEDRLLQRTRATTGQSVDLATVEAITGRPDAEGRVLGRDQAA
+ALASVAVSGRVVDVLVGPAGAGKTTAMNALRRAWETEHGAGSVVGLAPSAVAAQVLADDL
+RIATENTAKWWTTHQHTGATFHAGQLVIIDEASLAGTLSLDRITQAAEEAGAKVLLVGDY
+AQLQSVDAGGAFSLLIHDRDDAPELVDVHRFTHDWEKTASLELRHGRAPVIDTYLAHDRI
+HDGDAEAMTDAAYTAWRHDRQAGLVSVLIAETRENVTALNVRARADLILDGTLKPGPEIT
+LSDGSAAGVGDTIITRRNDRRLRNRHGWVRNGQTWTITAVHDDGSITIRPPGTRFGNSIV
+LPADYVAEHVDLGYAVTAHRAQGITTDTAHVLVEPTTTRENLYVAMTRGRESNKAYVILD
+RPDDHATAHPGDSPDATARTVLYGVLQHSGAELSAHETITAEQDRWGSIAQLAAEYETIA
+AAAQHDRWTTLVRGSGLTGDQAQAVIDSDAFSALTAELRRAEANHHNVDTLLPRLIRARG
+FADADDIASVIHHRLANATTRPAGSGRTRQAPRLIAGLIPEATGPMTPDMQQALTERRHL
+IETRAEAVLDTALHTHEPWVTALGPIPTSGRERQQWRRRAVVVAAYRDRYQITDPTPLGA
+QPEDTAQRIDRARAETAVRTLTRPTMEDERGRPAAQATRHLDL
+>3_1066
+MTVSMRVMSAGDGYKYLLRSVAAADGDRSLSTPLTRYYAEEGTPPGRWLGSGLTGLGDGQ
+LAVGDQVSEAQLQLLIGMGRDPITGEPLGRAFPQYAPVADRIERRVDELPDELGPAGRAE
+AVAQIEAEEASRGTRRAVAGFDYTFSVPKSVSVLWAVADAGTQALIAEAHHDAVAEVVD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002051.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002051.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1dc3a4ce4061eb4c1dcaff5a8ba818248c9e423a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002051.fa
@@ -0,0 +1,13 @@
+>1_25
+MSHASTVPPAADAPSRWGRAAGLSGLVMPAVLAAFSLYLLLGSLTMDTDGADFPGPDFFP
+LILSVAGLVIAAALAVEVVRVRQAPEG
+>3_1994
+MSQASTVSPAADAPSRWGRAAGLSALVMPAVLAAFSLYLLLGSLAMDTEGADFPGPDFFP
+LILAVAGLVIAAALAVEVVRVRQAPEGQADADGEVGQAAGPLTLFHSDFGALAWCFLGFL
+AFAVLLPWLGWILAGALLFWCVTRAFGAPHPVFDILVALFVSSLAYLGFAVALGLTLPSG
+ILGGGF
+>4_25
+MSHASTVPPAADAPSRWGRAAGLSALVMPAVLAAFSLYLLLGSLAMDTEGADFPGPDFFP
+LILAVAGLVIAAALAVEVVRVRQAPEGQADADGEVGQAAGPLTLFHSDFGALAWCFLGFL
+AFAVLLPWLGWILAGALLFWCVTRAFGAPHPVFDILVALFVSSLAYLGFAVALGLTLPSG
+ILGGGF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002052.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002052.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7ff675bdd14cfd3a5064fa60f5d06924d77af95f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002052.fa
@@ -0,0 +1,30 @@
+>1_27
+METLGLLMEGFAGALTPMNLLWVVLGCLLGTAVGVMPGLGSSMAVALLLPMTFALDPTAA
+FIMFSGVYFGGLFGDSTMAILMNTPGQASAIASTFEGHRMAQDGRAAQALATAALGAFIG
+GMAASVCVVFLAPVLAEFSTSFGPAEYFALALFAFVATSSVVADSVLRGLASLVLGLGIA
+VVGIDAVTGTERFTMGSPQLFDGIPLVTVTVAILALGEVFHVASRVRREHEDLRIRRTGR
+PWLSGAEFREAAPAWLRGTAIGLPFGIVPVGGSEVPTFLAYSVKRRLDRRRAHPQFGRGA
+IRGLAAPEAAGNSTTGMAMGALLTLGLPVSATAAIMLAAFRQYGLQPGPLLFDRSPDLVW
+ALLASFFIAMIVLLAINLPFAQLWAKLLLIPKHYLYAGITLFCGLGIYATTGAVFDLLML
+LGIGVLGFLMRRYGYPLAPLMIGMVLGPLAETSLRDALLSSVGDPAVLVSTPITWVIYGI
+LAIVLAFSVRAAVVRRTRQDV
+>3_1995
+METLGLLMEGFAGALTPMNLLWVVLGCLLGTAVGVMPGLGSSMAVALLLPMTFALEPTAA
+FIMFSGVYFGGLFGDSTMAILMNTPGQASAIASTFEGHRMAQDGRAAQALATAALGAFIG
+GMVASVCVVFLAPVLAEFSTRFGPAEYFALALFAFVATSSVVADSVLRGLASLVLGLGIA
+VVGIDAVTGAERFTMGSPQLFDGIPLVTVTVAILALGEVFHVASRVRREHEDLRIRRTGR
+PWLSGAEFREAAPAWLRGTAIGLPFGIVPVGGSEVPTFLAYSAERRLDRRRAHPQFGRGA
+IRGLAAPEAAGNSTTGMAMGALLTLGLPVSATAAIMLAAFRQYGLQPGPLLFDRSPDLVW
+ALLASFFIAMVVLLAINLPFAQLWAKLLLIPKHYLYAGITLFCGLGIYATTGAVFDLLML
+LGIGVLGFLMRRYGYPLAPLMIGMVLGPLAETSLRDALLSSVGDPAVLVSTPITWVIYGI
+LAIVLAFSVRAAVVRRTRQDV
+>4_26
+METLGLLMEGFAGALTPMNLLWVVLGCLLGTAVGVMPGLGSSMAVALLLPMTFALEPTAA
+FIMFSGVYFGGLFGDSTMAILMNTPGQASAIASTFEGHRMAQDGRAAQALATAALGAFIG
+GMVASVCVVFLAPVLAEFSTSFGPAEYFALALFAFVATSSVVADSVLRGLASLVLGLGIA
+VVGIDAVTGTERFTMGSPQLFDGIPLVTVTVAILALGEVFHVASRVRREHEDLRIRRTGR
+PWLSGAEFREAAPAWLRGTAIGLPFGIVPVGGSEVPTFLAYSAERRLDRRRAHPQFGRGA
+IRGLAAPEAAGNSTTGMAMGALLTLGLPVSATAAIMLAAFRQYGLQPGPLLFDRSPDLVW
+ALLASFFIAMIVLLAINLPFAQLWAKLLLIPKHYLYAGITLFCGLGIYATTGAVFDLLML
+LGIGVLGFLMRRYGYPLAPLMIGMVLGPLAETSLRDALLSSVGDPAVLVSTPITWVIYGI
+LAIVLAFSVRAAVVRRTRQDV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002054.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002054.fa
new file mode 100644
index 0000000000000000000000000000000000000000..081002596d4c2cffe480321fdd2443b1fefabfbd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002054.fa
@@ -0,0 +1,20 @@
+>1_158
+MEYTKKWLPLEAQVERLVQRGLEVDDLTRALRLLESVGYYRVTGYLYPFLESEKQVDDQG
+HTKIRVLNRYQPGTALHHAEEIIDFDRQLRMLVMEGVERIEVAVRMRIGYVLGRTSPFAH
+ENPTCFDDSFTRANTDSRDPRPSKQVLWLERVKQRRDGSDEQFVAHFRQKYDDHMPVWAL
+TELLELGHLSNLYQGMLQKDAEEVATAFGIPQKKMMGSWLASLNYVRNVAAHHARLFNRK
+LQNAPSRPAAGMVPLLDHLREPAAPKGDFGTYNALAIIAYMLRPIEAERSWAPRLAELFR
+TFPTSHALSVQSMGVPEDWHTLDLWRG
+>3_337
+MGYYRVTGYLYPFLESEKQVDDQGHTKIRVLNRYQPGTALHHAEEIIDFDRQLRMLVMEG
+VERIEVAVRMRIGYVLGRTSPFAHENPTCFDDSFTRANTDSRDPRPSKQVLWLERVKQRR
+DGSDEQFVAHFRQKYDDHMPVWALTELLELGHLSNLYQGMLQKDAEEVATAFGIPQKKMM
+GSWLASLNYVRNVAAHHARLFNRKLQNAPSRPAAGMVPLLDHLREPAAPKGDFGTYNALA
+IIAYMLRPIEAERSWAPRLAELFRTFPTSHALSVQSMGVPEDWHTLDLWRG
+>3_1973
+MRYSKPHLPYDQQVRLLASRGLNVGREGDAVRALKRIGYYRLSAYTYPMRAFTTDDAGTV
+HRSDDFVEGACLSDAVALHDFDHRLRRTLLPAIQSLEIALRTKVGYHLGKHGPLAHLDRS
+GLDPQRCDAVSRGPDHTGTKYDTWRSEYDSLQRKAGREDYMVHFATKYDGDVPVWAATEF
+MTMGCLIGLYRMMQPKDARRIAEEVGVKNPQVLFGWLKALNVLRNHCAHNARIWNRSTVY
+PPDKINRRMVEEELHHLVSADTNKVYFLTAVLAYLLRHVDPDSRFASDLRTTMGKFPSVL
+GWTPGHTMGFVDGWSTEALWSIH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002057.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002057.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c766a6d6debb82bbb788a77d18bba4870a8527d7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002057.fa
@@ -0,0 +1,21 @@
+>1_265
+MDTHRATASLPWIDGPAVRAALSPRAAVDALEAALAAGLDPEADAPRTRVSTAAGQLLQM
+PSTRGTEVGTKLLTLTPDNPERGLPVIQGVYVLFGAPGTPGQAPRAVLDGVELTGLRTSA
+VSALGVRLLADASPRHLVVVGTGVQAWEHALTFQDVFGLERVSVVGRDADRAAALAARIE
+AELGVTASAAGPEAVAEADVVVTCTAATAPLFDGTLVPEHATVVAMGSHTTDARETDDAL
+ARRATVAVESRDSAAREAGDVTLAIDSGALAGIEDTVTLAELVAGTARRREGAPALFVTT
+GMPWQDLVVASAVAREVLG
+>3_2231
+MDTHRATASLPWIDGPAVRAALSPRAAVDALEAALAAGLDPEADAPRTRVSTAAGQLLQM
+PSTRGSEVGAKLLTLTPDNPERGLPAIQGVYVLFGAPGTPGQAPRAVLDGVELTGLRTSA
+VSALGVRLLADASPRHLVVFGTGVQAWEHALTFQDVFGLERVSVVGRDAGRAAALAARIT
+AELGVTASAAGPEAVAEADVVVTCTAATAPLFDGTLVPEHATVVAMGSHTTDARETDDAL
+ARRATVAVESRDSAAREAGDVTLAIDSGALAGIEDTVTLAELVAGTARRREGAPALFVTT
+GMPWQDLVVASAVARVVLG
+>4_263
+MSTPISTAPGLPWIDGPAVRSALSPCAAVDALEAALAAGLDPEADAPRTRVATAAGQLLQ
+MPSTRGTEVGTKLLTLTPDNPERGLPVIQGVYVLFGAPGAPGQAPRAVLDGVELTGLRTS
+AVSTLGVRLLADASPRHLVVFGTGVQAWEHALTFQDVFGLERVSVVGRDADRAAALAARI
+EAELGVTASTADSEAVAEADVVVTCTAATAPLFDGTLVPEHATVVAMGSHTTDARETDDA
+LARRATVAVESRDSAAREAGDVTLAVASGALAGIEDTVTLAELVAGTARRREGEPALFVT
+TGMPWQDLVVASAVARVVLG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002058.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002058.fa
new file mode 100644
index 0000000000000000000000000000000000000000..94ee38e317cfc1d2b99f6bdcddadd150e0b7a608
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002058.fa
@@ -0,0 +1,21 @@
+>1_394
+MGTMPTSSALPRTTPDDVPERLLVLPAAQDVAGTPYAHARRLAEQAVADVGGTVVAEGDA
+SATALLMVRPIPVEALAAALAAHPHVSWVQFPFAGIEPFIPLVRSRPDIVWTSAKGTYAP
+PVAEHALLLTLALLRDLPARVRATTWGPSSGRTLNGLNAVVVGGGGIAQEYVRLLKTWDV
+HVTAVRRRAGDVPGADRTVTTDSLDEVLPGAQVVMIAAAATDETRGLFDADRLALLNEDA
+VLVNIARGTLVDTDAVVRALAAGRLHGYGTDVTDPEPLPEGHPLWTEERALITPHTADTP
+QMCVPLLHARVERNLRARAAGTELEGLVDAEGGY
+>3_123
+MGTMPTSSALPRTRPDDVPERLLVLPAAQDVAGTPYAHARRLAEQAVADVGGAAVAEGDT
+SATALLMVRPIPVDALAAALTAHPHVSWVQLPFAGIEPFVPLVRSRPDIVWTSAKGTYAP
+PVAEHALLLTLALLRDLPARVRATTWGPSSGRTLNGLNAVVVGGGGIAQEYIRLLKTWDV
+HVTAVRRRAGDVPGADRTVTTDRLDEVLPGAQVVMIAAAATEETRGMFDADRLALLDEDA
+VLVNVARGALVDTDAVVQTLAAGRLHGYGTDVTDPEPLPDGHPLWTEERALITPHTADTP
+EMCVPLLHARVERNLRARAAGTELEGLVDAEGGY
+>4_397
+MGTMPTTSTLPRTRPDDVPERLLILPAAQDVADTPYAHARRLAEQAVADVGGTAVAEGDT
+SATALLMVRPIPVDALAAALAAHPHVSWVQLPFAGIEPFVPLVRSRPDIVWTSAKGTYAP
+PVAEHALLLTLALLRDLPARVRATTWGPSSGRTLNGLTAVVVGGGGIAQEYIRLLKTWDV
+HVTAVRRRAGDVPGADRTVTTDRLDEVLPGAQVVMIAAAATEETRGMFDADRLALLDEDA
+VLVNVARGALVDTDAVVQTLAAGRLHGYGTDVTDPEPLPDGHPLWTEERALITPHTADTP
+EMCVPLLHARVERNLRARAAGTELEGLVDAEGGY
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002059.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002059.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8fa25cdb4f18fd7499488e89611d43c2c5d279b9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002059.fa
@@ -0,0 +1,15 @@
+>1_475
+MTYRDDLWDVAAGNHGVITTTEAEEAGVPAVEVRKLAQRGVLRRLAHGVYLHRQVPRDRF
+TDAAEAVATGGEDAFLDWDAVLSLYDLALVDPSVVRVGVTRRYRGSPRAHVRVTRRRPPP
+GDEDLTFHGGVRGLTINQALREALDRIPLERVAAAIEEARARGLLTVGEARSLKKDLEAR
+QNGGHRGGR
+>3_205
+MTYRDDLWDVAAGNHGVITTTEAEEAGVPAVEVRKLAQRGVLRRLAHGVYLHRQVPRDRF
+TDAAEAVATGGEDAFLDWDAVLSLYDLALVDPSVVRVGVTRRYRGSPRAHVRVTRRRPPP
+GDEDLTFHGGVRGLTINQALREALDRIPLERVAAAIEEARARGLLTVGEARSLKKDLEAR
+QNGGHRGGR
+>4_474
+MTYRDDLWDVAAGNHGVITTTEAEEAGVPAVEVRKLAQRGVLRRLAHGVYLHRQVPRDRF
+TDAAEAVATGGEDAFLDWDAVLSLYDLALVDPSVVRVGVTRRYRGSPRAHVRVTRRRPPP
+GDEDLTFHGGVRGLTINQALREALDRIPLERVAAAIEEARARGLLTVGEARSLKKDLEAR
+QNGGHRGGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002065.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002065.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ff614dc52f1fcd35f9bb99334f94258f60f84137
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002065.fa
@@ -0,0 +1,17 @@
+>1_575
+MTSPWVEDDELTDWEAPAAADDDGQTGTPLPYVDPEIAAELAGEGPPVWMGTRWREIEAE
+HQWEAWNTLRRWVDWFVAEYRLVTSVVPPCWYKHSDLTAELYAAMCMEYKVWEEQAPGLG
+PMMMWHPHVEMLTARLRRMVDEAGCAKIGQHKEPEAYGDRPAFNLDYDEDDFTAWAATTC
+EQHALERPEAGVKYVRARVFNGDGEEIALSNPVGLASRRTSTGVTAELMMTSSTPLAPGL
+RLTVPSATPGLEVGWQTSVNGHDWE
+>2_1765
+MSTHSPEPDDQYDDPGILDDQPDMFDTNALPEPPHPINWNLLSAQDLEAELLELNRWVDW
+LRHTYGLPASVIPPYWHRHPELLWELSALHLHWLCAYDPEQNGSAPLGWHRDFADARHRL
+RDWVTASGTRLDRDRPTRQTTWPGEEPQPTHGESVITDRDADFVQFIIDQVNERQAAEDA
+FYASLDDRIDPATGEVRDDVLGPEGG
+>2_2189
+MASPWVEDDEPDWSETAPLQDEGPTETSLPYVDPEVAAELAQEGPPVWMGTRWREIEAEH
+QWQAWNHLRRWVDWFVAEYRLGTSIVPACWYRHPDVTAELYAAMCMEYKVWDEQAPGLGP
+MMMWHPHVEMMTARLRRMVDEAGCAKIGRHKDPEAYGNRGAYELDYDESDWTRWAATERE
+EELIERPTEGVKYVRAKVVDSDGNVLGHSAPVGLRPVPNVVGVEAKVRVTSSTPAEPRMA
+VAVSSGRDDLGIEWEMSPDGAEWSTRPNDDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002066.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002066.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3aed840ab84dab78ba07b460dfc6791cb3009ea2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002066.fa
@@ -0,0 +1,11 @@
+>1_588
+MTMIKEPGVSPTAGLGPAAALFHGFSDPTRLAILRHLATGEHKVRELTEHLGLAQSTVSA
+HLACLTGCGLVSSRPVGRASLYSLAAEPELLEVLAAAERLLTVTGHAVELCPHSGPAATG
+ALPHDAGH
+>2_686
+MIQEKGATLDEVATVAYAHLFQAFAEPTRLAIVQHLASGEHRVRDLVEHMGLAQSTVSKH
+VGFLVECGLATMRPEGRSTWYSLAQSELLRTLIAAAERLLDATGTQALLCTHLRLPHTHH
+ASDTDKK
+>3_1723
+MSPAAGLGPAAALFHGFSDPTRLAILRHLATGEHKVRELTEHLGLAQSTVSAHLACLAGC
+GLVASRPVGRASLYALAAEPELLQVLAAAERLLTVTGHAVELCPHSGTPGPDGPAAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002069.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002069.fa
new file mode 100644
index 0000000000000000000000000000000000000000..61c1bc737260a17fc8e35ce5b3189e588f687fe3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002069.fa
@@ -0,0 +1,11 @@
+>1_780
+MTDSPIAADRDGIRYLSGAIPAADDVRALYDAVGWSAYTADMDTLMGGLQGSATVVTAFD
+GGRLVGLARVVSDGHTIAYLQDILVDPGHQRRGIASELLRRVFARFGQVRQHVLLTDTEE
+RQRAFYEAHGFRESHDVEGDELRAFVRFQSRDG
+>3_521
+MTDSPIAADRDGIRYLSGVIPAADGGRLVGLARVVSDGHTIAYLQDILVDPGHQRRGIAS
+ELLRRVFARFGQVRQHVLLTDTEERQRAFYEAHGFRESRDVEGDELRAFVRFQSRDG
+>4_749
+MTDSPIAADRDGIRYLSGAIPAADDVRALYDAVGWSAYTADMDTLMGGLQGSATVVTAFD
+GGRLVGLARVVSDGHTIAYLQDILVDPGHQRRGIASELLRRVFARFGQVRQHVLLTDTEE
+RQRAFYEAHGFRESRDVEGDELRAFVRFQSRDG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002070.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002070.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e238441487dbe505e0dfb11e7c66a0d5c1a0b420
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002070.fa
@@ -0,0 +1,18 @@
+>1_799
+MEVVILPDAAALGRHGADAVAAHVAARPEAVLGLATGSSPLPVYDELARRVRDGELSLRS
+CRAFLLDEYVGLPAGHPESYRTVIEREFVARTDIAPEAVHGPDGGAADVPGACAAYEEAL
+REAGGVDVQLLGVGTDGHIAFNEPGSSLASRTRIKVLAEQTRRDNARFFDGDLDQVPTHC
+LTQGVGTILDARHLVLLARGEGKAEAVRQLVEGPVSARWPVTALQLHPHVTVLVDDAAAG
+RLELAGDYRHMWEAKPRWQGL
+>3_540
+MEVVILPDAAALGRHGADAVAAHVAARPEAVLGLATGSSPLPVYDELARRVRDGELSLRS
+CRAFLLDEYVGLPAGHPESYRTVIEREFVARTDIAPEAVHGPDGGAADVPGACAAYEEAL
+REAGGVDVQLLGVGTDGHIAFNEPGSSLASRTRIKVLAEQTRRDNARFFDGDLDQVPTHC
+LTQGVGTILDARHLVLLARGEGKAEAVRQLVEGPVSARWPVTALQLHPHVTVLVDDAAAG
+RLELAGDYRHMWEAKPRWQGL
+>4_768
+MEVVILPDAAALGRHGADAVAAHVAARPEAVLGLATGSSPLPVYDELARRVRDGELSLRS
+CRAFLLDEYVGLPAGHLESYRTVIEREFVARTDIAPEAVHGPDGGAADVPGACAAYEEAL
+REAGGVDVQLLGVGTDGHIAFNEPGSSLASRTRIKVLAEQTRRDNARFFDGDLDQVPTHC
+LTQGVGTILDARHLVLLARGEGKAEAVRQLVEGPVSARWPVTALQLHPHVTVLVDEAAAG
+RLELAGEYRHMWEAKPSWQGL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002071.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002071.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2056f0e5664549efcc94c5120525be6122aa97b4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002071.fa
@@ -0,0 +1,9 @@
+>1_997
+MARHGRDEDEAHEAPAGAPAGAGTLAQWRIPLVGLLIGVGLGVVFGLGTERPWGTVIGCA
+MMGFALGIAWMYVERGRDGRDR
+>3_719
+MARHGRDEDEAHEAPAGAPAGAGTLAQWRIPLVGLLIGVGLGVVFGLGTERPWGTVIGCA
+MMGFALGIAWMYVERGRDGRDR
+>4_939
+MARHGRDEDEAHEAPAGAGTLAQWRIPLVGLLIGVGLGVVFGLGTERPWGTVLGCAMMGF
+ALGIAWMYVERGRDGRDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002076.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002076.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1e2d91f6c66affe0c907bec9d844ac663a176067
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002076.fa
@@ -0,0 +1,21 @@
+>1_1342
+MSHPTVFFYPRPRVDVAEVPAASHAGAVLLTDTIHATGLASSLREALGSWTKPLAEHHAS
+KVLLDLAMTLAVGGEVARDTDLLRCEPGLFGDVASAPTISRTLTTLAEDAPAVMTAIARA
+RRTAREQAWALAGEHSPAEGTSAKTPLVIDLDATLINVHSEKEQAAPTFKRGFGYHPLYA
+FLDHGSEGTGEPLAIHLRPGNAGSNTASDHIAVTRLALAQLPPALLGRGGRGSKKVLIRT
+DGAGGPKDFAGWLERQRLAYSVGFTLPANTPDLLERIDEAKAWTPAYDTDTEGIRDGAWV
+AELTGLLDLPGWPPECG
+>3_1083
+MSHPTVFFYPRPRVDVAEVPAASHAGAVLLTDTIHATGLASSLREALGSWTKPLAEHHAS
+KVLLDLAMTLAVGGEVARDTDLLRCEPGLFGDVASAPTISRTLTTLAEDAPAVMTAIARA
+RRTAREQAWALAGEHSPAEGTSAKTPLVIDLDATLINVHSEKEQAAPTFKRGFGYHPLYA
+FLDHGSEGTGEPLAIHLRPGNAGSNTASDHIAVTRLALAQLPPALLGRGGRGSKKVLIRT
+DGAGGPKDFAGWLERQRLAYSVGFTLPANTPDLLERIDEAKAWTPAYDTDTEGIRDGAWV
+AELTGLLDLPGWPPECG
+>4_1292
+MSHPTVFFYPRPRVDVAEVPAASHAGAVLLTDTIHATGLASSLREALGSWTKPLAEHHAS
+KVLLDLAMTLAVGGEVARDTDLLRCEPGLFGDVASAPTISRTLTTLAEDAPAVMTAIARA
+RRTAREQAWALAGEHSPAEGTSAKTPLVIDLDATLINVHSEKEQAAPTFKRGFGYHPLYA
+FLDHGSEGTGEPLAIHLRPGNAGSNTASDHIAVTRLALAQLPPALLGRGGRGSKKVLIRT
+DGAGGPKDFAGWLERQRLAYSVGFTLPANTPDLLERIDEAKAWTPAYDTDTEGIRDGAWV
+AELTGLLDLPGWPPECG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002077.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002077.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0c275ec0b878a881a2ad35513ea36d727c8364a4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002077.fa
@@ -0,0 +1,9 @@
+>1_1343
+MRITAFATNAPRGQLPVLELRHRRRARCEDRIRNAKDMGLMKFPLQGFAQNQVWCQIVQL
+AGVIVAWMQAIALAGHDARRWEPKRFRARLFEIPATIVRRCRHKILHSRLIAFEGVARV
+>3_1084
+MRITAFATNAPRGQLPVLELRHRRRARCEDRIRNAKDMGLMKFPLQGFAQNQVWCQIVQL
+AGVIVAWMQAIALAGHDARRWEPKRFRARLFEIPATIVRRCRHKILHSRLIAFEGVARV
+>4_1293
+MRITAFATNAPRGQLPVLELRHRRRARCEDRIRNAKDMGLMKFPLQGFAQNQVWCQIVQL
+AGVIVAWMQAIALAGHDARRWEPKRFRARLFEIPATIVRRCRHKILHSRLIAFEGVARV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002079.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002079.fa
new file mode 100644
index 0000000000000000000000000000000000000000..27e8f04bd306877e35f9cc9c3d9ab49378a8fe2e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002079.fa
@@ -0,0 +1,9 @@
+>1_1348
+MSEEQWDEAAFRASIPAAREKVEFAARFCEIGPSQPRWDSHRPVVELIFYLCKLDYDIKV
+LLLPS
+>3_1090
+MSEEQWDEAAFRASIPAAREKVEFAARFCEIGPSQPRWDSHRPVVELIFYLCKLDYDIKV
+LLLPS
+>4_1297
+MSEEQWDEAAFRASIPAAREKVEFAARFCEIGPSQPRWDSHRPVVELIFYLCKLDYDIKV
+LLLPS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002080.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002080.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8b4d398a90d9d1abd95755652a79f801d82cf1e1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002080.fa
@@ -0,0 +1,10 @@
+>1_1454
+MRESGVMSRDVISDEVWAVIGPLFPAPKSTGRPPVDRRAVVEATAWRFRTGAPWRDLPER
+FGNWNTIYKNVNRWAAQGVWERVLEKTQSMAQQAGELDWVASIDSTIVRVHQHGATLPRP
+TGGLDELQEISGRAG
+>2_1710
+MIGPLFPAPKSTGRPPVDRRAVVEATAWRFRTGAPWRDLPERFGNWNTIYKNFNRWAAQG
+VWERVLERTQSMAQQAGELDWVASIDSTIVRVHQHGATLPRPTGGPDELQEIRGRAG
+>2_2183
+MIGPLFPAPKSTGRPPVDRRAVVEATAWRFRTGAPWRDLPERFGNWNTIYKNFNRWAAQG
+VWERVLERTQSMAQQAGELDWVASIDSTIVRVHQHGATLPRPTGGPDELQEIRGRAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002085.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002085.fa
new file mode 100644
index 0000000000000000000000000000000000000000..36e0f0ac4366ef831ad72f24b7a54f20c919c30e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002085.fa
@@ -0,0 +1,33 @@
+>1_1569
+MSTFNENVVELAALEHFAELGYRRVHAPEIAPGEPDAERDSYEDVVLWGRLRDALRRINT
+SADAALIAEAVKTVQRAGSQSAVDENARLHKLITEGVPVEHRGDDGLLRTTRLWLVDFDE
+PANNDWVAVNQFTIVENGKNRRPDVLVMVNGLPLALLELKNPAAGHATLKSAWNQVQTYR
+HDIPSVFVPNAVTVISDGTSAAMSSYSGAFEHYAPWKTIEGREVVSNRPALEVLIKGVFE
+PKRFLDLLKNFVVFSDETVTDKSTGQPTRALLKRVAKYHQYWAVNAAVESTVQASSPDGD
+RRGGVVWHTQGSGKSFEMVFYAAKIMRDPRMANPTLVFITDRNDLDDQLFGETFAPARIL
+PETPVQAATRSDLRAKLKRASGGIVFTTLQKFAPGEDGDANPVLTDRRNVIVIADEAHRS
+QYGFSETLDRHGRLKSGLAKHMRDALPGATYLGFTGTPIESNDKSTRAVFGDYVDVYDLT
+RAVEDGATVRIFYESRLAKIELSEADLAALDDLADEITESVEKDTATAAKSRWSRLEAVV
+GAEARLDLVARDIVEHWEKRRESLFGKGMIVTMSRRIAVRLYEKIIALRPDWHSDDPAQG
+KIKVVMTGSASDPAEFQPHIHSKDVRKDLKLRAKNADDPLELVIVRDMWLTGFDAPSMHT
+MYVDKTMQGAGLMQAIARVNRTFRDKPGGLIVDYIGVFANLQNALSEYSPSDRDQAGVPI
+DEMVQVMLEKHDIVRGLLHGVQFDSSPELTAAQRLNEYAKVLDFVMADPDRTSRFNDQVL
+ALAKAFALAGARDEAAAIRNDVRLFTDVRAAILKIQNPDSGRGGSGAVEVDTALSQLLNE
+AVTANQVVDVYMLAGIETPEISILSEEFLDSFAEKDRPNLQMGLLRRLLNDQIRTVQRTN
+VVQGRKYSEMLEETVNRYTNRSLTTAEIIAELVKLAKQMRDAQKRHEELGLREDEVAFYD
+AVVQNDSAVMELGDETLKAIAQELVTSVRQSATIDWNLKESVLAAMRSKVRRILAKYDYP
+PDAEAKAIELVIEQAELFARGVSA
+>4_2143
+MTHANAPLTPTGRLRMVHRHLRDLLTQSNSGGIYFTTLQKFGLTQAERDAGADHPVLSDR
+RNIIVMADEAHRSHYDTLDGYAAHLKNALPNASLIAFTGTPIAEGERDTRRVFGDDIDVY
+DLHRAVEDGATVPVSFEPRLITLSRVDGVDDESLDAAADELTAGLDEADRDRIQRGVATL
+EAVYGAPHRLQTLAEDFVRHWEDRRDAMQPTMGVPGKAMIVCATRSIAARLYERIVALRP
+EWHDDADDKGRIKVVYDANPSDTGEIKKHMRRPSALAAVKKRLKNPADELEIVIVKDMLL
+TGFDAPALHTLYVDRPLKGALLMQTLARVNRTFRGKEDGLLVAYAPLAENLQQALAEFTR
+DTRTAGTKTLAQNTEEAAEIIETMVGMLADTVGVDWKATYQSDPKNGWRKALLEVTSRLR
+SPGTPGNTDPEDPTVRPVADTFRSQASRLHRAWALAGRVAAVERFRLDVKFYEEVRTWLA
+KLDAQDRIARGEPIPEEIARLLGEMVVDSTEATGVMDIYAAAVG
+>4_2146
+MEEAAAPSKAELAIEGLRTDLLKEATRVTGGNEIRRAQFSERINAVMAKYTNQQLTAAEV
+IAELVEMAKEVVAEADRGRRFTPPLHDDELMFYDVVAQNEAALDVMGDDVLAQIARDLVA
+TMRRDIKTDWTVREDVKAKLRASIKRLLRKYGYPPDQQPEAIVEVMRQMEAVAPRMAEGQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002089.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002089.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a27012613f9b8b474573adebb189b262b66c1fe2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002089.fa
@@ -0,0 +1,9 @@
+>1_1902
+MTTAVRTCAASACAFNAETSCSALAITVAGSDRTPGCGTFVQLDVRRPVTEGASTVGACH
+RLECTYNADLACTAEGIEVTDVATCATYTID
+>3_1606
+MTTAVRTCAASACAFNAETSCNALAITVAGSDRTPGCGTFVQLDVRRPVTEGASTVGACH
+RLECTYNVDLACTAEGIEVTDVATCATYTID
+>4_1829
+MTTAVRTCAASACAFNAETSCNALAITVAGSDRTPGCGTFVQLDVRRPVTEGASTVGACH
+RLECTYNADLACTAEGIEVTDVATCATYTID
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002095.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002095.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0d03dff4981a805482104b193503a824ff379804
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002095.fa
@@ -0,0 +1,21 @@
+>1_2105
+MRVPGPFPAHLQDAPFTRAQALAAGVSGSRLRSRDVERVAHGHYRWIGPVTGATPPARPL
+ATELSRLQDLAAMRPDVVVTGESVARLLGWPLPDDVKARVRPTVLRSRTRRVLREPGVRT
+RLVDLDRVLVRRDRLHGLRWTSHADTWFHLATVLDRDALVAVGDRLAREDERRGKVALAT
+RRELGAALERHTGEAGIVRAREALALVRTGSDSPAETELRLALMAAGLPEPDLQIELWDP
+DYSLWHPASADLGYRRWRIAIHYEGKTHDGAAQVGKDTRRDAVFLRQGWLNIRVAGTDRW
+RGFVETAGLVRAAIAERGGLDAGGAEDRLRN
+>3_1830
+MRVPGPFPAHLQDAPFTRAQALAAGVSGSRLRSRDVERVAHGHYRWIGPVTGATPPARPL
+ATELSRLQDLAAMRPDVVVTGESVARLLGWPLPDDVKARVRPTVLRSRTRRVLREPGVRT
+RLVDLDRVLVRRDRLHGLRWTSHADTWFHLATVLDRDALVAVGDRLAREDERRGKVALAT
+RRELGAALERHTGEAGIVRAREALALVRTGSDSPAETELRLALMAAGLPEPDLQIELWDP
+DYSLWHPASADLGYRRWRIAIHYEGKTHDGAAQVGKDTRRDAVFLRQGWLNIRVAGTDRW
+RGFVETAGLVRAAIAERGGLDAGGAEDRLRN
+>4_2051
+MRVPGPFPAHLQDAPFTRAQALAAGVSGSRLRSRDVERVAHGHYRWIGPVTGATPPARPL
+ATELSRLQDLAAMRPDVVVTGESVARLLGWPLPDDVKARVRPTVLRSRTRRVLREPGVRT
+RLVDLDRVLVRRDRLHGLRWTSHADTWFHLATVLDRDALVAVGDRLAREDERRGKVALAT
+RRELGAALERHTGEAGIVRAREALALVRTGSDSPAETELRLALMAAGLPEPDLQIELWDP
+DYSLWHPASADLGYRRWRIAIHYEGKTHDGAAQVGKDTRRDAVFLRQGWLNIRVAGTDRW
+RGFVETAGLVRAAIAERGGLDAGGAEDRLRN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002098.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002098.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bce7c72504cec8ca37534906c9a65a20cfe6a661
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002098.fa
@@ -0,0 +1,9 @@
+>1_2144
+MTNAPNRDELPLPDYDHIPNGTLPTRITGLDESQVEQLLAYERAHGDRLPVVQVLETRLE
+ALRSGAQPSGDQVPDTPEVGGSRTGSPVTPETSGPPVEPLSRGIPADPQHPGNR
+>3_1868
+MTNAPNRDELPLPDYDHIPNGTLPTRITGLDESQVEQLLAYERAHGDRLPVVQVLETPLE
+ALRSGAQPSGDQVPDTPEVGGSRTGSPVTPETSGPPVEPLSRGIPADPQHPGNR
+>4_2089
+MTNAPNRDELPLPDYDHIPNGTLPTRITGLDESQVEQLLAYERAHGDRLPVVQVLETRLE
+ALRSGAQPSGDQVPDTPEVGGSRTGSPVTPETSGPPVEPLSRGIPADPQHPGNR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002099.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002099.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4f65dee4ee07eeeca1db90810d366e62c4b300d9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002099.fa
@@ -0,0 +1,12 @@
+>1_2156
+MMQSSEGAWVDPVEGIMYEHMLLLRVATQGVAPYGRSSALERSATVLLARLEAGGAMSIA
+ELAEAFDLDVSTVHRQVAAAMKAGLVERVVDPDGGSARLHRPTEEGRARLAAELSSRADN
+VAQIVSSWPAEDVVEFSRLLRRFNEGAEERRGHPWPRPQTGPGAEDPRL
+>3_1880
+MMQTSEGAWADPVRGIMYEHMLLLRVATQGVAPYGRSSALERSATVLLARLEAGGAMSVA
+ELAEAFDLDVSTVHRQVAAAMKAGLVERVADPDGGSARLHRPTEEGRARLAAELSSRADN
+VAQIVASWPAEDVVEFSRLLRRFNEGAEERRGHPWPRPQTGPGAEDPRP
+>4_2096
+MMQSSEGAWVDPVEGIMYEHMLLLRVATQGVAPYGRSSALERSATVLLARLEAGGAMSIA
+ELAEAFDLDVSTVHRQVAAAMKAGLVERVADPDGGSARLHRPTEEGRARLAAELSSRADN
+VAQIVSSWPAEDVVEFSRLLRRFNEGAEARRGHPWPRPQTGPGAEDPRL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002103.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002103.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6a64bec0aa80310b9ac4c61e73e9d82d4d11fa27
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002103.fa
@@ -0,0 +1,9 @@
+>1_2203
+MEAHAFADNAPILRVMEKVGLRHEGTFKEESLHRTRGWVDGVTYAMLASEHRARGRRLST
+SRRPEVRNSLDITLRKVAA
+>3_1909
+MEAHAFADNAPILRVMEKVGLRHEGTFKEESLHRTRGWVDGVTYAMLASEHRARGRRLST
+SRRPEVRNSLDITLRKVAA
+>4_2135
+MEAHAFADNAPILRVMEKVGLRHEGTFKEESLHRTRGWVDGVTYAMLASEHRARGRRLST
+SRRPEVRNALDITLRKVVA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002104.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002104.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2f78017b74981c2c7b3b396bfee8079f57217844
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002104.fa
@@ -0,0 +1,15 @@
+>1_2208
+MGTIFLYEIAGTAILLLLGVGVVANVVLSKTKGNGGGWLLISFGWGLGVFAGVYVAAATG
+AHLNPAVTVGLLVSGAEEYAPGIAVTLGTTLAYFAAQLIGAFLGAALAWLAYRDHYQTET
+DQGAILGTFATGPEIRNPLWNMVTELIATFVLVFVVLLFGSTPSGLGPLAVALLVVAIGA
+SLGGPTGYAINPARDLGPRLFHAVAPIRHKGGSDWGYAWVPIVGPLVGAVLAGLAAPLFV
+>3_1912
+MGTIFLHEIAGTAILLLLGVGVVANVVLTKTKGNGGGWLLISFGWGLGVFAGVYVAAATG
+AHLNPAVTVGLLVSGAEEYAPGIAVTLGTTLAYFAAQLIGAFLGAALAWLAYRDHYQAET
+DQGAILGTFATGPEIRNPLWNMITEVIATFVLVFVILLFGSTPSGLGPLAVALLVVAIGA
+SLGGPTGYAINPARDLGPRLFHAVAPIRHKGGSDWGYAWVPIVGPLVGAVLAGLAAPLFV
+>4_2141
+MGTIFLYEIAGTAILLLLGVGVVANVVLTKTKGNGGGWLLISFGWGLGVFAGVYVAAATG
+AHLNPAVTVGLLVSGAEEYAPGIAVTLGTTLAYFAAQLIGAFLGAALAWLAYRDHYQAET
+DQGAILGTFATGPEIRNPLWNMVTEVIATFVLVFVILLFGSTPSGLGPLAVALLVVAIGA
+SLGGPTGYAINPARDLGPRLFHAVAPIRHKGGSDWGYAWVPIVGPLVGAVLAGLAAPLFV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002108.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002108.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d4857fe15f01435b98d80ff489a51fe725682fc6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002108.fa
@@ -0,0 +1,20 @@
+>2_306
+MTMMHELGHVIYDRDVSTPWRSTKSPEEERAFRFAGAMLIPANVMKKRVTESLTLHGYLA
+IKADYGVSVGALVKRAESLGIISKSRARSLYIQISSQGWRYNEPVPVAAERSLLIQQATA
+RAFGENLEGVAQSTGVPHRLVEHWTGFKRDLRAPMADVIPLRR
+>3_350
+MTRISPLSAAGTDFDGTRLTVARRLRRKTKATLAREVGVTPTAIAQFEKNLSKPTQSVLA
+RLCLQLGLPREFFGAGRPLALLPASGAHFRSLRSTSATSREQALAYGELCLELVDLIGAY
+VDLPPVSLPELELPEELTDEAIVEAARLTRSTWGIAPGPLPSVVQTLEAHGIIALRLPVE
+TDAAVDAFSTYSGARPLVFLSPTKDDKARSRFDAAHELGHLVLHPDTEPGSKLVEQQAHQ
+FAAEFLMPRDEIIEDLPRRINWPAFHELKRHWGVSLRALVYRAHSLGRLSEASYRRANQQ
+LSAWGHPEPGPLGPAESPQVLGIARQLITDGGYDFEGIMAAGRIAPEVAEAVMDAASTVR
+PKLRFVI
+>4_163
+MSLEPSRIVRARRRAGISKKRLADLIGATPRTISNYETRGAPDALAATLADVLNVDPTFF
+SMPATSPLEEDRVFFRARRRTSAAVRHAASEAGRTGVEFYSLIAEHFKLPEVDLPDLVGM
+GPAIAARQLRAHWKVGAGPLPNLIQLAESRGLRVMSLPGTTDEVDAFSVWEKGVPYIFLS
+QRKTAERSRFDLAHEIGHLVLHSGLGNGDSVERDAEREADAFASEFLLPGEVLRGAMPRQ
+PSTEAVLKAKVSFGVSAMAMAYALFRNGLLSEWAHRQMCIDLTRRGYRSSEPGGIHRETS
+RVFGLTLSLARQRLGLGTEEIAQALGVCPQEIHELTFGHAVTPVASVGGSSAAPEPGPRP
+SLRVV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002112.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002112.fa
new file mode 100644
index 0000000000000000000000000000000000000000..059773f2314347717d39b706210cdaa7622fccac
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002112.fa
@@ -0,0 +1,25 @@
+>2_654
+MAAVAYVDPGNVAANLTAGAQYGYLLVWVLVAANLMAMLVQYLSAKLGLVTGRSLPELLG
+HRMPRGRRLAYWVQAEIVAAATDLAEVIGGAIALHILFGIPLLAGGVIVGVVSMILLGVQ
+SRRGQRPFEFVVVGLLAVITLGFVSGLFYGPISWGEAVAGMAPRFEGTQTVLLAAGMLGA
+TVMPHAIYVHSALARDRHQGAHTNPATLGGLLRATRWDVGLSLLVAGSVNIAMLLLAAAN
+LSGVSGTDSIEGAHAAITAALGPTVGVLFGVGLLASGLASTAVGSYAGSEIMGGLLHWRI
+PQMVRRVLTLIPALLVIASGVDPTWALVLSQVLLSVGIPFAMIPLVRLTGARAVMGRHVN
+SAPLQTAAWVVVALIVALNAVLLWLTLTGQE
+>3_341
+MTAGVDRPADGKVAVERVDRPGRRGMRLLGPAFVAAVAYVDPGNVAANLTAGAQYGYLLV
+WVLVAANLMAMLVQYLSAKLGLVTGRSLPELLGHRLPRGRRLAYWVQAEIVAAATDLAEV
+IGGAIALHILFGIPLLAGGVIVGVVSMILLGVQSRRGQQPFEFVVVGLLAVITLGFVSGL
+FYGPISWGEAVAGMVPRFEGTQTVLLAAGMLGATVMPHAIYVHSALARDRHQGAHAHPGT
+LGRLLRATRWDVGLSLLVAGSVNIAMLLLAAANLSGVSGTDSIEGAHAAITTALGPAVGV
+LFGVGLLASGLASTAVGSYAGSEIMGGLLRWRIPQMLRRVLTLIPALLVIASGVDPTWAL
+VLSQVLLSIGIPFAMIPLVRLTGARAVMGRHANSTPLQTVAWVVVALIVALNAVLLWLTL
+TGQG
+>4_1953
+MAAVAYVDPGNVAANLTAGAQYGYLLVWVLVAANLMAMLVQYLSAKLGLVTGRSLPELLG
+HRMPRGRRLAYWVQAEIVAAATDLAEVIGGAIALHILFGIPLLAGGVIVGVVSMILLGVQ
+SRRGQRPFEFVVVGLLAVITLGFVSGLFYGPISWGEAVAGMAPRFEGTQTVLLAAGMLGA
+TVMPHAIYVHSALARDRHQGAHTNPATLGGLLRATRWDVGLSLLVAGSVNIAMLLLAAAN
+LSGVSGTDSIEGAHAAITAALGPTVGVLFGVGLLASGLASTAVGSYAGSEIMGGLLHWRI
+PQMVRRVLTLIPALLVIASGVDPTWALVLSQVLLSVGIPFAMIPLVRLTGARAVMGRHVN
+SAPLQTAAWVVVALIVALNAVLLWLTLTGQE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002116.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002116.fa
new file mode 100644
index 0000000000000000000000000000000000000000..aa403572b18e1b8e258ed3c0212014908563ed18
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002116.fa
@@ -0,0 +1,7 @@
+>2_2151
+MSRFQMLSDAQWELIAPMLPTHTGRPGRPFSDARMMIEAIIYRYRCGIA
+>3_354
+MSRFQMLSDAQWELIAPMLPTHTGRPGRPFSDARMMIEAIIYRYRCGIA
+>4_105
+MSRFQMLSDAQWELIAPMLPTRTGRAGRPFADARAMVEAIIYRYRCGIAWRDLPEVYGPW
+QRSVDLASALGRKRHMGHGAGHADRRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002120.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002120.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a1c290996b9f1834c104599d7ff628ff9fbce064
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002120.fa
@@ -0,0 +1,6 @@
+>0_30
+MSTLETVAERVAADRALYAAAYAQGHADGLAEGLAQGAAHPAITDSVARVFAGWGGAEAA
+HARSVAAFRAWHTAARAELKEAA
+>3_2172
+MNGPTCRHCADWAYGYAEGYAQGHASGLAAGRVQGAAEGPAHPAIADSVARMFAGWDGAE
+AAHARSAAGFRDWYAQARQEENAHDIAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002124.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002124.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b68e1f28b3aeb4db76a9ba52a098d867d0051aba
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002124.fa
@@ -0,0 +1,14 @@
+>0_69
+MRLAAVNPIPGLFTIAPADRDHEVGLRVGVTVLVPLLVLLAAGRMDLAVYAVFGAFTGIY
+GRNLRHGPRLQAQLRGGGLMLAVLAAATLAGRLGVSEQADPWGLVLWTTVVAGVAGVVAT
+LLAAPAGVHHNYWAMVAAVVPLVGHSTRYRVSRGLQRVIGTFLGLVLTAGIILLDPPVIV
+LVLIIAVLQVAAELYIARQYVIAQTVVTPLALLSTMLVGVTAGGAGSLMAAGGLQHLADR
+GVETVIGAAVGIVCVLFPWAWRRWVWGSPDPARAIPVVRGPGS
+>2_53
+MTTQAPGIPLTMGRIRARRPRRKDPRPVRLADVNPFPAMFTIGPPDRGHEVGLRVGVTIL
+VPLLLLLALDRMDLASYATFAAFTGIYGRNEPHGVRLRTQLRAGLLMLGVLTAATVAGRF
+GISEAHDPWGLVLWTTVIAGAATVATGWWNLRPAGSLFHIFAFAAAASVPVKPPVVEGML
+MAVAVVVWAIAVGLSSRVLPSHRTPLTWPPSDRPDRGRRRLILLEAMWYVIAAGVAGSVA
+TLVAAPQGVRHNYWAMVAAVVPLAGHSTRYRVNRGLQRVLGTVLGLGLTALIVLLDPPAV
+GIVLVIAVLQVLAEVYIARQYVIAQTVVTPLALLSTMLVAVTVGGAGSLAEAGAFRNLQD
+RAVETVIGAVVGIVCVLYPWAWRKWVRRSPDPTREIPIVRPEQIQRPVGGRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002127.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002127.fa
new file mode 100644
index 0000000000000000000000000000000000000000..818e7b7cc8ec839977dae0d612e6913953fbef6f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002127.fa
@@ -0,0 +1,21 @@
+>0_82
+MGESRSGGIIRYAHLQEPHCVYGGWIQEDFTARQVLDSLTSQNEQGEVVPWIARAWEVSD
+DGLAWTFHLREGVHFTDGTPLDAQVVVDNFQYWADGGNSTAAVHLGGFFESAEVADAHTV
+RVHLLRPNGVLPSTLSQTYFGLQSPTALRTRSKEDNCRQPIGSGPFTVTEFQRGSHISYA
+RNPDYQWAPADARHQGPAYVDGIRWSFVPDNTSRYGALLSGEADAIGEVPAVNVAEAQER
+FAYQQYVTPGRPVVMSLNTREGIFTDVRVRKAFAHATDRESIVRSAFLGTVPFEPNGFIS
+RTTPGYDPTLADALPYDADAANRLLDEAGWTGRDPDGVRTKDGRRLQSRIVYGAGSILNP
+DGATAVASVAEQARAVGFDLGIRPATQSELFGGLFATPETRGIEVGYWTSPHAGILHINY
+RPSTPEEPNGANTSFLDSPETYSTVVDALSARSEEQRNALFAQAQHELNDLVPAIGLYDQ
+TNSVATSRGLTGVWLEGSQGAPVFHDAYFVAPAAPDGPPADARRTDQKD
+>2_124
+MSRPPHPARRRRRALRVSVAAAAALVLASGAAAVALPTGPDGPSDGQVLRVALGSDQGCL
+DPQQVSSNDSIYVARQVADSLTDQDPETGQIVPWLAERWEVSEDARAYTFTLRDGVTFSD
+GTPVDSEAVAANLDSLAEGLGPRASLATGYLAGYAETDVHDARTFTVRFHRPTVQFLQAT
+STVSLAVVSPASIAAGAEQRCAGVVGSGPFVVDAYSPGAGSTLSRRDDYAWGSSLWKETG
+RAGVDRVEFSIVQESGVRAGLLQSDQVDLIGSIAPQDEDPLAASGARLLQRANPGTPFGL
+LLNHEHEPFTDPRVRQAVSAALDRQEIVDVAFFRDSQPATSMVSRTTPGYADLSGRLQHD
+PQRAAAALQEAGYTRDPDGYWTKDGTPLTFTVTWSAVSPHNAPALEMLQQQLDDAGIRVR
+LREISTDQAGQILAESDFDAFWTNTTRADVDILRTSYHTGLANRSNAAASPTDGLLEQID
+ATTDSAARDRLAARAQDELLTSLPVIPVAELDTQLAARPEVSGVLFDSGSRLILHDARVD
+AEQKEQKEQEEH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002132.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002132.fa
new file mode 100644
index 0000000000000000000000000000000000000000..47d398a0284c07669f9fe7c58b4c69d376d38f76
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002132.fa
@@ -0,0 +1,24 @@
+>0_108
+MNPTFSRRTGLRTLAAAVVAGTVTIQAPAVLARTAASTPAAGADGFRVLPYLMEPTATSM
+DLVWFSEREVPGTVVVSGPGLGDNHRGGRTRPAGTRVSTPEFQPLLAYTEKERAQSIKGL
+AQGSWLLGPASYKHRVSLTGLKAGKEYRYTVTQGGQRHTAAFRTADDGANWSDLRLIAFS
+DTETEPYGRIENREWELSMVTPYTEGSLPRPGEGSVWHQTFGSTTRYGQFTLKYPLTQDV
+ALRENIRHIDAAAPDLLLVAGDLGQGGGYQPGWDEFFRHFAGEHSDIASRVPLITSLGNW
+ETFAALNDGYGTAADRSPVVRSRNKYHAYFERTSAGTDRENPRFRGSYYRTDHGPLTILT
+LDSTNGVPDESVGAGLLSGAPFSGDDRNLTAATMPSDTQGSFTQAEYEAAFPTVFPGSTP
+ADADLPVLNPGHEQWAWTERQLADARAAGRIVIVEFHHAAYSVGVHGTPPNHEFPDDQSG
+VAMRVYTPLFEKYGVAVVISGHDEMFQRSWVDEDGDGVGFHSYDVGVAADGLRGEQYAKD
+ASGQWKPVRFNTHMEWTANTHEPETWADVDGVRQLVDGGMHYGHLQIDLKRRGREAEMTL
+TPMYVFPILDDEYRLVRTERRAYDDVQTVRFDRRGVPKPRR
+>2_76
+MNPAFSRRTGLRALAAAVVTGTVATTAPAALAKTAQHAPAVPAGADGFRVLPYLMEPTAT
+SMDLVWFSERPVAGTVVVSGPGLGNNHGNGRTRPAGTRVSAPELQPLLAYTQKELTQTLT
+GLPQGSWLLGAENWKHRVSLAGLKPGKEYTYTVTQGGRRHTASFRTADDGRDWSDLRLIA
+FSDTETEPYGRIENREWELSQVTPYTEGSLPRPGEGSLWQQTFGSTVRYGAFTLKYPLTQ
+DVGLRENIAHIDAADPDLLLVAGDLGQGSAYQPGWDEFFRHVAGEHSDIASRVPLITALG
+NWETFAALNGGYGTPADRSPVVRSRNKYHAYFERTGAGTDRQNPRFRGSYYRTDHGPLTI
+ITLDSTNGVPDESVNGPLSGAPISGDDRGLTAATMPTDTQGSFTQAEYEAAFPKVFPGST
+PADADLPVFNPGHAQWAWAEEQLADARAKGQIILVEFHHVPLSIGEHGTPPNHAVPDDQS
+GVAMRVYAPLLEKHGVAVVISGHDEMFQRSWVDADGDGVGFHSYDVGVASDGLRGEKYAK
+NAAGEYEPVRFNTHMEWTANTHEPETWADVDGVRQLVDGGMHYGHLQIDLKRRGQSAEMT
+LTPMYVFPILDSQYRLVRTERRAYGDVQLIRFDRNGVPLPRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002140.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002140.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2cc129468ca0303ae820a5f37f8ead218e7f0a6d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002140.fa
@@ -0,0 +1,6 @@
+>0_275
+MADMGNKFDKLKGDAKEGLGKATGDDRLRAEGKTESTAAGAKDAVQNAGDKVKDAAAGIK
+DGLSKDR
+>2_222
+MADMGNTFDKLKGDAKGAVGEATGDSHLEAEGRTESAAASAKDAARSAGDAVKGAAEGVK
+NAVSRD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002141.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002141.fa
new file mode 100644
index 0000000000000000000000000000000000000000..53897e6d499c0da083f98af9b4dd340f05b71b20
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002141.fa
@@ -0,0 +1,18 @@
+>0_325
+MSAEEKNLPHGEESTTVGEMNDTVATGLPEEPRTEEGADAPQGARAENPQSDAAAGQCPV
+AHGGAALPHPTSGDANQQWWPNRLNLKILAKDQPVQSPHEADFDYPAAFEALDLAEVKET
+IAEVLTTSKDWWPADFGNYGPFMIRMAWHSAGTYRVTDGRGGAGEGQQRFAPLNSWPDNA
+SLDKARRLLWPVKKKYGQSLSWADLIVLAGNVAHEIMGMPTFGFSGGRIDAYEPADDVYW
+GPETEWTNGGAERYKGERDLDNPLAAVEMGLIYVNPEGPEGEPDPLKSAKDIHETFSRMG
+MDAEETVALIGGGHTFGKTHGAGPVEPHIGPEPEAADLEQMGLGWKNTYGQGKGRDTITS
+GLEVTWTYHPTRWDNEFFHILYAYEWELMESPAGAKQWRPVNGGGSDMVPESDFQGRREP
+RMLTSDLALRFDPVFGEISRRFKDDFAAFQDAYSRAWFKLTHRDMGPRPRHRGVEVPQEE
+LLWMDPVPAPESVPGDAEVKAVKDAVAQAGLSVTDVVKTAWAAASSFRSSDFRGGANGGR
+IRLEPQRSWEVNEPAVTGPVIDALEKIAQEAGVSFADTVVIAGNWAVEKAAADGGVQVTV
+PFTPGRGDATAEQTDVTSFGHLEPKVDGFRNWDPRGSKTFPAEFALVDRANLLGVSAPEM
+TVLVAGLRVLGAVHGDSQDGVWTDRVGVLSQDFLTAVTDIDTQWEKVAEGRYRGVTADGR
+ELTGTRNDLVFGSNPELRTLAEVYAADDAREKFVQDFVRAWAKVMDADRFDAK
+>2_266
+MHGKGASLPHPTSGDANQQWWPNRLNLKILAKEQQVINAHDADFDYPTAFAALDLDEVKK
+TIAEVLTTSKDWWPADVGNYGPFMIRMAWHSAGTYRSGDGRGGAGTGQPLTARPAADDGR
+PPHRVGARSAFPPGAGPCLQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002142.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002142.fa
new file mode 100644
index 0000000000000000000000000000000000000000..93384dd0e0a347208d2e2ee6caa1b2bd448b2b29
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002142.fa
@@ -0,0 +1,11 @@
+>0_328
+MQRIVPNIWCDGTADAAAEFYLRAFAGLPGTAHVRTDRYPTEGLLDFQRPLAGKTLTQEL
+DLAGHRFILVNAGDEFAPNPSISFFVNADPSRMDDPRGTLDALWAELTDGGRVLMDLGPY
+PHSEHYGWVEDRHGVSWQLMLTDPAGDPRPVIIPQLMFCGPAQNRAAEALDHYLAVFDDA
+TPGQRVTYGDMGHVPEGGPVEAGSIVFADARLRGEWVAAMDSAVAQDFTFTEGVSLMVQC
+RDQAEIDRLWEALSAVPEAEQCGWLKDRWGVSWQIVPEDMGELMERPGAFEALLGMKKLV
+IADF
+>2_460
+MSDAAAGAPQLISPFLWFHDGAEEALRYYVDVFPDSEIEEIQRYPDESLDPHYAGMAGKV
+ISAWVRLGGVRFGALDGGPAFTLSEAVSFVVACRDQEEIDRYWAALSHVPEAEQCGWCKD
+RFGVSWQIIPADMGRLLQSPAQIQAMMAMRKIEVAALEALA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002148.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002148.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0d55d560747e2f085d7ea66ec4948cd05c975f34
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002148.fa
@@ -0,0 +1,12 @@
+>0_375
+MPPIDQWVTFEPLTGSPVGIAALLFAALYLRGAIWMWRNRRRWAIARTASFLIGCALIFA
+ITMFGVNRLATESITALVFQQITLLTVVPPLLIAGSPGLLLLRSTPHTGLGRLVLRAAHG
+GLRSRFWSAALHPVVAIVIAILLYPVLYLTDAISVIMRIPFGQDALLFVILVLGIVSATP
+LWSSDPLPRQPSFAARFIDIAVEIQIHAIFGLILLRTATPLFSAYATPTGSHDPVIDQAT
+AGTLVWTYAELPMFVVLIVCLSRWRARDVRTSRQRQKAEDAELDSYNEYLASLSRRRNES
+>3_314
+MPPIDQWVTFEPLTGSPVGIAALLFAALYLRGAIWMWRNRRRWAIARTASFLIGCALIFA
+ITMFGVNRLATESITALVFQQITLLTVVPPLLIAGSPGLLLLRSTPHTGLGRLVLRAAHG
+GLRSRFWSAALHPVVAIVIAILLYPVLYLTDAISVIMRIPFGQDALLFVILVLGIVSATP
+LWSSDPLPRQPSFAARFVDIAVEIQIHAIFGLILLRTATPLFSAYATPTGSHDPVIDQAI
+AGTLVWTYAELPMFVVLIVCLSRWRARDVRTSRQRQKAEDAELDSYNEYLASLSRRRNES
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002158.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002158.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e3cdaf0e1ad94a346ae36b7349d40bf8d324902c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002158.fa
@@ -0,0 +1,10 @@
+>0_489
+MTLTAALLSFALLALLITITPGLDNALVLRYAGRQGSGAAFAASAGICAGLFVWALAASL
+GISALLAASEVAYTALRWIGAAYMVYLGVRMLISAIRGGYGAPGGSSVATVRSRDAFRTG
+FTVNLLNPKVGAFYVALIPQFMVTGVAPAAMGVLLAVVHIAVCMAWFVVLIALVGVVSGW
+LQRPSVQRGLDGVVGTALVGFGARLALAKA
+>2_426
+MTLTVALLSFALLALLITLTPGLDTALVLRYAGRQGSGAAFAASAGICAGLFVWAVAAAL
+GVSALLAASELAYTALRWIGAAYMVYLGVRMLIAAVRGTSGDHDGDAAPALVRRGQAFRT
+GFTVNLLNPKVGAFYVALIPQFMVPGVAPAVMGVLLAVVHIAVCLAWFVLLIALVGVVSG
+WLRRPAVQRGMDGVVGTALVGFGARLALAKA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002164.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002164.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d5a7ca9ead45599ccb73d54cf6b26cc942ebc9d4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002164.fa
@@ -0,0 +1,12 @@
+>0_511
+MLRPRHTRPALLLTAGLTSLALLTGCADGDPAPGAAATTAAATTAAATSSAPTTQAASSS
+PASSPRTSSAAASSSAKASDAAAAASSSAAAASASEAAESSRAAEAEAEASREAEAEAEA
+ARAREAEESAAAEAEREAEAAATVEEDSSTTAGEGTVSSGQAVRAAKNYLEVLPFSRDGL
+VHQLVAGDGYSDADAAAAVDSLTVDYEAQARRAAQNYLDVLPFSRDGLVHQLIAGDEYSD
+ADAAAAVDSLTVDYQEQAARAAQNYLDVMPFSRDGLIRQLMDGDDYSASQAEYGVDAVGL
+>1_2154
+MLRPRLARPTALLTAGLAALALLTGCSVDGDAAAGSSAGSPSAASSSSGASSSGRVSDGA
+APSSSRAAGSSSAVASASRAVESSQAAEASRAAAASREAEKSAAAAAAEASRSAEAEAEA
+VAEAEREAEASAEVEVGAAEEESAASAGGDGLSAEGQQAVRQAQSYLSFTAFSRSGLIDQ
+LEFEGFSNADATAAVDSLDVDYAAQAVKQAQSYLTHTAFSRTGLIDQLEFEGYSNADATA
+AVDGLGIDYNEQAAKQAQSYLSHSAFSRAGLIDQLMFEGYSASQAEYGVDAAGL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002168.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002168.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2785f916d0899b246e6ffb712845117972acde96
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002168.fa
@@ -0,0 +1,15 @@
+>0_563
+MNKDAQPSTELLSSIPEGHVEFGLHTFGDVTLDAEGRRLSHPEVLRDVVAEGVLADQAGV
+DVIGIGEHHRPDYAVSNPEMVLAAIGARTERIKLISAVTVLSSDDPVRVYQAFATLDGVT
+GGRAEVSLGRGSFIESFPLFGHDLKDYERLYEEKLDLFMKLRTEEPVSWTGTVRAPLERQ
+SVFPTTAHEHGLPAWVAVGGSPQSVVRAASHGAGLELAIIGGAPRRFAPYADLFRREVAE
+RGLEPRRVAVHVHGFVADTDEEAMELYYPHWEAAFTKLARERGGPLPTPEQFRQEAVHGA
+QHIGSPETVARRVADTVRAIGASRFGLKYSNATLPHGPMMRSIELYGSRVIPLVRDMLSE
+G
+>2_781
+MDVKFHIDTFGDRTSTLDGELESHAQGVRHVVELAETAEQAGVDGITIGEHHRDDYTVSA
+PDMVLATIAGRTERLTLGTGVTVLSSDDPVRVYERFATLDALSSGRAEAIVGRGSFTESF
+PLFGYELSDYEELFEEKLALFAELRAEQPNPVSWTGKLTQNLEDVVLYPPLEGAEPLKAW
+VAVGGSPQSVIRAAGHDLPLMLAIIGGPSARFAPFAKLYRDAREKFGHAGETQVGFHMIG
+HIAETDEAALEQFAPHYLEHHKRLGAERGWGSMGMEGLMHEVRHSLMGVGSPETVAKKIA
+RGIADLDATRVNFKVQHGPIPHEYNRRSVELFGEKVIPLVKDMLAAS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002171.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002171.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c69d8b2744a9fcae205ab7f3ab258c073bf8e167
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002171.fa
@@ -0,0 +1,8 @@
+>0_621
+MAARGGTPADHAPAARRLLDRAPVLLLAERAGSNSPRVVGRSGATLAALHPGAQPRWLTA
+GLTVTPEARRTGVVRRLLHAVIGAVADRGGGDLHSVVNAGNAPSLALHASLGLEIVETGP
+RFAGIEFASGVGVLLSRPTCPESAPACA
+>2_1936
+MIASYARWQPEDHGTPRADVLIRPVRPHDVPALARVMAARGGAPETHTDAAALLLDRAPV
+LLLAVAEDGGGDALGWSGALQTSVHPGEHPVWLTAGLTVVPQARRAGVGLRLLHAVAEAV
+RTSRIETGPLHSVVNTRNRASLALHARAGFQETASGPRFAGIEFDGGDGVLLRRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002172.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002172.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e9123b5c64821e2276565fc4d0d39adbde7886c3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002172.fa
@@ -0,0 +1,8 @@
+>0_626
+MSGGAQSVSVRVHGDSILGQECLKSMMWPWSVERLGLPCVGLSWGVPGETFKVQGAYARE
+PVRYEDLNFQEIGLVGEDFGRGRPAWPDRCFSLELFPEYSPEVAWLRLRVVEEAGAQVFR
+AQVTLRPRSEGRGCEADLDWWESRLGALPAQMREWARS
+>2_2172
+MSGGAQSVSVRVHGDSILGQECLKSMMWPWSVERLGLPCVGLSWGVPGETFKVQGAYAQE
+PVRYEDLNFQEIGLVGEDFGRGRPAWPDRCFSLELFPEYSPEVAWLRLRVVEEAGAQEFR
+AQVTLRPRSQGRGCQADLDWWESRLGALPAQMREWARS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002177.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002177.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bf22e11287572575ba335acfde8edd7f628fcafe
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002177.fa
@@ -0,0 +1,6 @@
+>0_717
+MLQRPLEPAQYVSLAYSDALIAAGVSASVGTVGDSYDNALAETVNGLYKAELIHSKRVWE
+SVEEVELATMGWVHWWNTARLHEALGYCTPAEVEATYTHDQDSAPVAS
+>0_727
+MLQRPLEPAQYVSLAYSDALIAAGVSASVGTVGDSYDNALAETVNGLYKAELIHSKRVWE
+SVEEVELATMGWVHWWNTARLHEALGYCTPAEVEATYTHDQDSAPVAS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002179.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002179.fa
new file mode 100644
index 0000000000000000000000000000000000000000..699d2cc77482cf535d32bfcf00ef34f4c8f1955f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002179.fa
@@ -0,0 +1,8 @@
+>0_741
+MPVRLRPAVLDDAKALTALARSQREHLAPWEPERPARWFTEAGQREALEQADCDRAAGRS
+YAFVITDDAGHLLGRLTLASVVRGAGQFCSIGYWVALEATGRGVATAAVEQALQIAFGEL
+GLHRVQAEILPHNHASRRVLEHHRFQRYGLGHV
+>2_1935
+MEITLRPASPGDAEELAALTLAQREHLAPWEPERGPGWFTVDGQRHALRAADADRAADRA
+HAFVIVGASGAIVGRLTLASVVRGAAQFCSIGYWVAHEATGRGIAGEAVRRGVALAFGPL
+RLHRVQAEVLPHNHASIRVLEKAGFLSYGRAPEYLRIAGRWQDHLLYQRVNPDWRPA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002180.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002180.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b29501ac7a35d93de654a495a33b207ec12f129b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002180.fa
@@ -0,0 +1,14 @@
+>0_755
+MAGGEAAVAWILGALRRELGAANLGEEDLEIVVERDRVWGSLWTVTAQGRRFWFKRPHAC
+LRREVPLRRVLSARAPGELLSTVAACAETGWQLTADQGPVLAQRAREDGPSHYVELARSL
+ARVQKSLTAADVAELRNIGLPVFETGDAVARLDEQLGWFSGLPAGHPAQCTAAERERAIE
+GMSVLVERWAVDARMLEGVVPELSVDHNDLHGGNAFVTAEGVRLSDWGDTVLAHPFASLR
+ALLVPVRNVFETEAMEQIRGAYLAEWGLGEDVGDVLDLAMMLAVPQRLSCWSALADADAW
+AEYAEYIAPLWREIGTPVAEVEVP
+>2_2348
+MTGTGVLDVAGRTAARDWIAGVLDLPAAALTVRVVRERSWGDVWRLSSPAGVHWFKAPHP
+RLRGEVPLRALLESRAAERVLPLVAADHERGWQLTADAGRTLAALARDDAGAPRPGEVAR
+LYAGLAGALAAMQEAVGEDDLRGRGLTEFDPAKAELSLLRELAPFRALPAAHPAHCTAEE
+EARAVAVRAALAMRWEDCGGPADPLGLDHNDLHGGNAFLGADGRVLVSDVGDAVLGHPGA
+SLRALLVPVRAEHGADAAETVRTAWLAARGQDHAAGRERLELAMLLAVPQRLRAWGALRS
+PETWAAYAEWITALWRDIGTPVDQLTTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002183.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002183.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a12d4f83896ea2e79b806b8b5858c9d12eb0b263
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002183.fa
@@ -0,0 +1,6 @@
+>0_833
+MALFRKTAAWGATAAGAVALAAAAMAATWTGPGYTVVNDHSNIFDYKGSIKTTSCVRQSD
+GTHLIGGYIRYVQGGRDTGRLWTPTATSCGQTVSRSTTFKDSLALNAPKTQFYYGLNKAP
+YGALSEPLGGN
+>2_771
+MGDSRCGQTVSCSTTFGDSLGLNAPRTYFNFDLNDVPYGALSEPVDGN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002186.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002186.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3d16548dc6fbbc22e54f7c18b744797a32e7690c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002186.fa
@@ -0,0 +1,6 @@
+>0_877
+MTSTPTRAKRKQTARELAERFGVSPRTIRRTVAQERADYLADAAARHERIRALRAEGLSM
+RAIAAKEGVTVGTVHYAIHKDD
+>0_1290
+MTSTPTRAKRSQTARELAERFGVSPRTIQRTVAQSREDYLNEAAQRRARIRALRAEGLSM
+RAIAEREGVTVGTVHYALHKEDQQP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002189.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002189.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9378f357428d6057953a0f126e03b7fe605d064d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002189.fa
@@ -0,0 +1,10 @@
+>0_890
+MPSRRPPERPVVGPAAPDVAPSRPVPGSCQRALVRRSPLILAAVVLLVSAAVLAARGETE
+AAGLSVQIAMVVPVPIALERAHRVRLPTALHAMYAALLLVAPWVGAALGGYDAWPWWDAL
+VHFYSGVPIALGCVFLLGVAAARRGLVLPPGLEALLVMALHSLVALAWEIAEFTADQALG
+AQTQKGNTDTMTDMIVGTLGALIVAFALYAHRTRGRFAWLSRFTGA
+>4_1808
+MTPHLDTHPDARPDPGSRQRALVRRSPLILAAVVLLAGAAVLAAQGHREAAGLSLQIVTV
+VPVPIALERAHRVRLPTALHAMYAALLLVAPWVGAALGGYDAWPWWDALVHFYSGVPIAL
+GCVFLLGVAAARRGLVLPPGLEALLVMALHSLVALAWEIAEFTADQALGAQTQKGNTDTM
+TDMIVGTLGALIVAFALYAHRTRGRFAWLSRFTGARTDLAGGPAQPPPA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002190.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002190.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7f7963cbb0084a28f1e4395b3652bb962f590662
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002190.fa
@@ -0,0 +1,12 @@
+>0_913
+MAAGGFTLGLGQPLTMSLVTQAVPADWRSSALAVRLMGNRAGQVVLPATAGLLAAPLGPA
+AAVWFACAVLAASGLERTAAARRRR
+>2_845
+MTESRTGAAAGERTTAGPGAGWLWALIGAAVLTQAATNLARPVTSYHLLSLGAPDAAVGL
+ATAAYALLPLVGALWLGRVTDRLSSAAPLVVAGAAVVAAGAAGLALATDVAAVLAASAVL
+GVGHLAFTIAGQAAIARRAPAHLLDGAFGWFTAAFSLGQMLGPLLSGGILTAVGGTPRDA
+TTLALWVSAGLALAGALPVLLAPGAPPGTRDPAAREASAESGAAPGDDAGRPTVRAILAR
+PGVGSAMLASLALLAVLDILTAFLPVVGERHGVSAAWVGALLALRGAGSLVSRVFLPRLR
+RRFSRELLLAVALWASAATIAAVPVGMTSGLLWLAAAAAVAGGLTLGVGQPLTMSVISEA
+VPHAWRSTALAVRLMGNRLGQVVLPAAAGLAAAPLGPSAAVWTACAVLAVSGAERAARSR
+RRRPPRSVRSGGGRGGSASADQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002194.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002194.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d54a9814670d6a081b7b1efb4592e4c8d2ec04a1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002194.fa
@@ -0,0 +1,9 @@
+>0_957
+MGPGQHAKLTMEGIAARAGVSKQTVYRWWKTKVDVLVEAVGAGYLVIPLPVIPDTGDLRE
+DLAHWLREMQEEIDGGGATHLSQSLVAAIATADSQSRQIHGMLVAPVREQLHARFRSARL
+GDGVDREMLAETVGAQLVMRVLFAEPTDEEWVRRLLDLVAPEGS
+>2_922
+MTSLTPPRAGTIRPGGRTARVRAEVLRATRELLTQQGASAMRMELIAERSGVHRSTLYRR
+WKRPAGIIADLADDIAGTIAVPDTGDLGQDLRQLAGRLAHQLDGDGGALVRALLGWPDQE
+VQQHLEDFWRDRRADVGLVLQHHGIDADPALVTRLLASPLHYRSLIERHPVDDETITAAV
+ESTILAVLRTPRTSHR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002195.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002195.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2187cbd6825de0b5e4b3bbeb07042dbbc2161c45
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002195.fa
@@ -0,0 +1,10 @@
+>0_984
+MDPVSTPTDPHRHPAPDARVRVQAGDAVVADGPLWARAALFAVPAVWLGLLIGISLIEAP
+LKFTAPGITIPLGLGIGRRVFFAMNLVEVVLAVVLLVALARVLGRPRGLTVPGPGRLWLG
+GLTAAGLLAVKAVAIRPFLNRRTDRVLAGVDDGGSSWHYLYIAVDGLLILTVVALIVAVA
+RHLLVRTTAA
+>2_929
+MSVPPHPTPAPDAPRPLPGAAPREAGNAVVVGGPRGARALLLAVPGVWLGLLVGISLIEA
+PLKFTAPGITIPLGLGIGRRVFFAMNLVEAVLAVVLLVALAKSLGRPRELTAPGPGRLWL
+GGLTAAGLLAVKAVFIRPFLNRRTDMVLAGVDDGGSLWHYAYVAVDGLLILTVIALIVLA
+ARHLLPASPGAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002196.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002196.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8f4949abe3a39ab322d2c7db94b6cd50bab89745
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002196.fa
@@ -0,0 +1,13 @@
+>0_990
+MTDAGPQGPAVPVRTRRVAHPGRVTAVVLVVAALVAAAFLAGRFFQPPSTAADNEAAATP
+IDVWAHAEERVIDDGSSYVATVAAGRTRTVTVAADGPAVVLRQAAEVGEMVRPGDAAGEV
+SGVAYVFLPEPLALYRDLTEGDRGEDVASLQRALRQTGRWTATDGVFGDSTARALRETFR
+GAGSPLPEDEPVTVGWRQFIPVSDDGAVVTAAATYGATLTEDRPLLELQVSAPTIRFTAD
+VTQATALEKGQEVEVSGAFGSLHGTIAKIGEFAAAEGSERAGHPVTVAFDATAEDAPPVG
+QSVTVSTTAAEDVPAMLTVPQTAVRVEGASSYVVVQVPASAREGSASSAPAERRVPVTVE
+RTGGGYAAVSGDLAPGDRVKVS
+>2_934
+MLVLALLAASFVAGRFFQPPTTADPAAVARPIDVWAAVEQRAVDTTASFAGTVAAGKTRS
+VAVQAEGPAVVLRQTAKPGESVRPGDVAGEVSGVTYVFLAEPLALYRDLTEGDEGEDVAS
+LQRALQKAGHATDTDGVLDSGTARALRELFAEAGDPLPEDAPVTVSWHQFIPLGKDGAQV
+TAAAGVVSALYPAWVASRQRPADALRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002198.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002198.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d9a19e825a5753de5763187fad11842b6fd18da7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002198.fa
@@ -0,0 +1,14 @@
+>0_1002
+MSPREPAPLPAAFSDLPFGAADLRRAGVSVERTRRADLRRVSQGLHRAREAERGEWADLG
+YPVDPLPWVPEEAAAVVPLTGGVVSHLSALLLHRLTVPPWVRPDGRLHVSRRHGRGVCDR
+SGVATHGRSVPQEDVVALHGIAVTSVERTWLDLASLMPRGPVDPLVIAGDALVNRPWIAG
+DGRRGEPVTSVESLRAALRRAGRFKGVRAARAALDLVRVGADSPPETELRLALVDAGLPE
+PELQVSGDPGDRFAPVADLGYRDWRLALQYDGGHHRSREQQARDARRDGWFHDRGWRSLR
+LTADDRLDGFRRAIAWVRRHRP
+>2_944
+MAPRAPLPLPAHLADRPFTRVDLTTAGWSIERARRGDLVRVVHGVHRSWEAETGDWADLG
+FPVDPVPWPPVDAAAVVRRARGVLSHQSAALVHGLVVPAWVRPDGRLHLSRPHDRGLSGL
+PRVQTHARSVPPVDVTSIHGIPCTSLERTWVDLASLMPRGPVDPLVIAGDALVNHPWAGE
+GQARGAARTTVVSLRAALERAGRFKGVRAARLALDLVRVGADSPPETELRLALLAAGLPE
+PELQARIDPADPWAPAVDLAYRPWRLSLQYDGAHHRTREQQGRDARRDGLVQDAGWRSLR
+LTAEDRHDGFRRAVEWVRRHGSP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002201.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002201.fa
new file mode 100644
index 0000000000000000000000000000000000000000..60be1062ae62aade7f3c709fff02df72caf1c549
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002201.fa
@@ -0,0 +1,12 @@
+>0_1059
+MTRDIIRTERIGPVTVIHLQDDRALNALGSALVAGLADALEHAQQDPEVRAVVITGSDRA
+FCAGAHIPEVLALREALTADPDAEVYLDRLFDLLAASPQPVIAAVRGLALGGGCELALAC
+DLVVAGESASFGLPEVRLGVIPGAGGTQRLVHAIGKAKATRMLMTGESVDAAWAESAGLV
+AEVAADEDVVARAVDIARRAADNAPGAVRLAVGCARRAQDLSLTDGLAHERRAFLEALAS
+DDAAEGMSAFAQKRRPVFGSR
+>1_1737
+MTRDIIRTERIGPVTVIHLQDDRALNALGSALVAGLADALEHAQQDPEVRAVVITGSDRA
+FCAGAHIPEVLALREALTADPDAEVYLDRLFDLLAASPQPVIAAVRGLALGGGCELALAC
+DLVVAGESASFGLPEVRLGVIPGAGGTQRLVHAIGKAKATRMLMTGESVDAAWAESAGLV
+AEVAADEDVVARAVDIARRAADNAPGAVRLAVGCARRAQDLSLTDGLAHERRAFLEALAS
+DDAAEGMSAFAQKRRPVFGSR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002202.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002202.fa
new file mode 100644
index 0000000000000000000000000000000000000000..02a7272a8a80afb59f8e6d6b5fc4cc664e9a899b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002202.fa
@@ -0,0 +1,12 @@
+>0_1061
+MQIKDRTFLVTGGASGLGEATTRALLDRGGHVVVADRAGTAPEGAVFVEADVTDAVQVAH
+AVAEATRQPGPLSGVVNCAGIGSAAKVISRDGPQPLADFERIVGVNLIGTFNIIRLAAAA
+MAENEPDDDGGRGVIVNTASVAAYEGQVGQAGYSASKGGVVAMTLPIARELAAYGIRVNT
+IAPGLFLTPMMHQLPEKARASLGEQVPYPSRLGDPAEYAHLVTHIVENQMLNGETIRLDG
+AIRMAPR
+>1_1735
+MQIKDRTFLVTGGASGLGEATTRALLDRGGHVVVADRAGTAPEGAVFVEADVTDAVQVAH
+AVAEATRQPGPLSGVVNCAGIGSAAKVISRDGPQPLADFERIVGVNLIGTFNVIRLAAAA
+MAENEPDDDGGRGVIVNTASVAAYEGQVGQAGYSASKGGVVAMTLPIARELAAYGIRVNT
+IAPGLFLTPMMHQLPEKARASLGEQVPYPSRLGDPAEYAHLVTHIVENQMLNGETIRLDG
+AIRMAPR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002207.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002207.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5f402dfbaf4b5b8fd2e680b4a4a32bce53aebaa7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002207.fa
@@ -0,0 +1,6 @@
+>0_1114
+MTARRGPLTPFFDSVRTTGFRRTRPRLVGGVAAGIASGTGVNVWLVRLALVLAGLLPVLG
+VGAYLAVWALTPWEDGTVPAERALGGR
+>2_1044
+MTPVSRPRPGGARRTPLTPVFDGIRALGFRRTRPRLVGGIAAGLAANTGVDVWLMRLVLV
+LVGLLPVLGLGAYLVVWALTPWEDGVIPAERALSGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002210.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002210.fa
new file mode 100644
index 0000000000000000000000000000000000000000..15a9efba1768bbaba9a1c5262c41db879cc1fb91
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002210.fa
@@ -0,0 +1,10 @@
+>0_1247
+MVKKLEQNMGADAMRAATGRDHAGWRAVLQDAGAQQWSHPRIAAYLVEEHGVDGWWAQGI
+TVDYEQAHQGRLPGQQADGTFSVGLTRTVPGERLEALARVEAAVSAVHGEPHGRNLTASQ
+PVVRWRLPDGGRLAAAAQAPNKTGTPVNLTMQRLPDAAAVEPTRRALEELLEAARSGEGP
+VATPGR
+>2_2005
+MSTSPARGANLNAIAEATGLTFEDWAAWLDARGARDLTVHAEIVGLVLERMRSGETAEVG
+SPEWWAQGVTVAYEQHIGRRRPGQRADGTFAVTASRILEGTREEVHARAVGAVRAALSDG
+GALRGVGLAKEPTESATATRLFWRAVLADGTRAELATEPRPQTAGKPAKAAVVATHSRAA
+SAEEAAAWKAFWRNLPAAL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002220.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002220.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0732adc44e1885265b3059152eaa728f67f580a2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002220.fa
@@ -0,0 +1,11 @@
+>0_1884
+MTDLAAEHPRTDAVDSVSTRTHDEPFAVVGPWKDDPAAAGTAEKVKVTDEMLELVEAVRP
+TLLADGMFLVGLDIVGDKLMEVNVFSPGGLGSCQSLYGVDFAPAIIEDLERKVSVRKHYK
+GQIGNANLATI
+>2_1834
+MKIGFVVNDVATEKPVYTTTRLAMAALQAGHEAYLVGAGDVAYEPDGSLSVLAHGTQKKH
+RSLERLLEEVQDPANAAQMPVDELDVVMLRNDPADDATERPWAPTAAVSFGQLIAAAGVL
+VVNDPHTLANALSKAYFQHFPELVRPTTLISRDEALISEFIDERGGKAVLKPLQGSGGSG
+VFLVDRKESPNLSQIVEAIARDGYVVAQEYLPEAKNGDVRMFVMNGRPLEVDGRIAAFRR
+RSSSDDVRSNMSAGGTAEKVDVTDEMLALVEAVRPKLLADGMFLVGLDIVGDKLMEVNVF
+SPGGLGSCQSLYGVDFAPAIIQDLERKVATKDHYLGRIDNTRLAAL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002221.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002221.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ac9aad7b20aebaa2929da8837872d10b02bd0feb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002221.fa
@@ -0,0 +1,16 @@
+>0_1891
+MATISTRTSKKGVTTFRVGYYEGGRFRQMPAMLSETGARRIKAIIEDPAQGPDVARRLLE
+AHADGAEDVPTLAQCLDRYVEARAVRCSEGTLAGYRREAARTFLPRLGQLPVTAIDRPAV
+QDWIRWQMTQPTARSRAAAERAARAGTPAPSLEPVSPKTVRNAHSLLSSILYLAVQDGLI
+PTNPAHGQDLPADDVEEEKDIFTRPEWDRFYRAMTPHFQPLLALLITSGARWGEATALQV
+RDLDVDAGVIHVRRAWKKGAQGVVLGTPKTQRGRRAIMLPDHVVAMLTPLAAGRPPEDFL
+LTSPTGRVIHRTNFVERHWKPALAAAGITKDLSPHSARHTFASWALMEGVAPQIVQHRLG
+HESLETTSRRYAHLLLDAQRAAVDAIGWRPSPGT
+>1_920
+MATIQTRTNKAGRTTYRVGFYEAGRFQWLPALAREAGAQRVKAIVEDPRQGPTVARRILE
+AQVDSAPGMPTLAEFFPRYIEHRGLRCTPGTLAGYEAEAARTFLPRLGELPVDMIDRRTV
+AEWIRWQLQQPTARWRAVAARAAAATPPRPEPPLATVSPKTVRNAHALLSAVLGLAVQEG
+ILPANPARGADLPDDDVEEERGIFSRAEWARFYAAISESYQPLLIVLLVTGARWGEATAL
+QVRDLDVAASVIHVRRAWKKGKEGAVLGVPKTARGRRTIMLPDWAVETLEPLAAGRAADE
+FLLTVPGGGVIHRTNFVERHWKPALAAAGIAKHLTPHSLRHTFASWALMDGVPAQVVQHR
+LGHESLQTTSRVYAHLLLDAQRAAVDAIGWEPPPGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002223.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002223.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fdf8ba4bb95f2752e194f71a4e030dd055cda2b0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002223.fa
@@ -0,0 +1,8 @@
+>0_1893
+MFHPWRALRTLTHVVVVWARPHPAAPAATDGATVIWLDPRMTQAERRCALTHELVHLEHG
+HRGCQPPAVEHAVRAAAARQLITLEQLSAALPWSMSLDELADELWVTPLVLTDRLAGLTR
+AEREHLAARIPEHRDTV
+>1_917
+MFHPWRALRTLTHVVVVWARPHPTAPAATDGATVIWLDPRMTQAERRCALTHELVHLEHG
+HRGCQPPAVEHAVRAAAARQLITLEQLADALPWSMSLDELADELWVTPLVLTDRLAGLTR
+TEREHLAALATEHSA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002231.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002231.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e2ce9ddbdb5b9ba25ef455d8691618d3a7abefeb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002231.fa
@@ -0,0 +1,22 @@
+>0_2153
+MAQPIAAIVVASPTRNASRLIAYALNRKQGQTTDRFVAASGLNGAIPEIAAHQFRDNRKR
+HGKNGERQVQVPDGEGGTVTVTEGVYVQGYHVIQSFARDGDGALDPSDPDAWEEAHRLGR
+KLCRRLAGDGRMAVVVTQIDGATGCIHNHIVLDSIDRQTGKSFASSNVKHKMLAATHDEV
+LAEAGYVQQNELQSTAAERREPSEDRALLKHQQWVAGGRQGPEPYSVAIVKHRIREAQGD
+PRSVSFDTYAGVLLEHGVRVEKRGEKGAGLTYEMVLADGGGGVLKAQPAHRRRASKLGRD
+FMLPAVEAACARNRAREVGRLRGLGAPVLPPREESAVEALLRELTEARAKGRAGRRPGPT
+EAPAAPPRTPEPREPAEASQAAQRAAQAQQAAAVAAPVQSSAWRSRLWDLPPSNRTVRTQ
+QIIDAVAEWEPSARERLQSGERLDEPAIPKGVGARFLESYGQYLDPAVRTELEAREETRA
+QRREQFELEREHEEALQAVGRRPEAERTIYERGVRAQLDTARLRREAIEAAIAEGRYGRA
+DVDGIVSEAEQAEREASARRREQVAERAAAMRDEDRESDDPQPGD
+>1_1442
+MAAPIAAIVVASPTRNASRLLAYALNKKKGQTTDRFVVASGLNGAIPEVAAAQYRDNRKR
+HGKNGERQVRVPDDKGGMRTITEGAYVQGYHVIQSFARDGEGALDPNDPEAWEEAHRLGR
+KFALRLAGDGRMGVVVTQIDGRTGCIHNHLVLDSIDRQTGKSFASSNVKHKVLAQTHDEV
+LREAGYAQQNELQSTAAERREPSEERARLRHEQWGANGRQGPEPFSVAVMKQRVREGMSD
+PRSVSFETYAEVLAERGVRVERRGQDHPGLTYEMVLSDGKGGTVDPQPAYRRRASKLGRD
+FMLATVEQALERNRTKQAVQPTGHRPLLDPSKYVALVGRADQVPAPAVTATPNADETERP
+LLWRTYERMGLDWREARKVAPETEVEPAPTPDVAEPLPAPSAPAAEPIAAPTEPEDEAEA
+QDEAQRATAPAYRSPVRDRTVKRERSREFRERLAAADEHVVARLEAGEPVDDTVLKGLGP
+DKIRSYRTSLHPQTQRALRRRQSMQGAAARAYAAGQRELAQRIRAEVAAGEYRWIEPAPD
+AVAQHEQDEPELGG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002234.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002234.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9be80083aa914e3036ab8a14f68d21c33e386a9e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002234.fa
@@ -0,0 +1,8 @@
+>0_2164
+MTTTPPPVDRTRRPVATYRAISSRDASSTQRDGEAVLEVRRFAARDGHAEAEVLFGDGQW
+QLCDPERDLIPAFEFDAFPDHPFLAVEYGEDWNGWATPVVTRETLADVLAALELAHRWEG
+STAVLEIEDYEDRIEARADGLYDLAQAGWTVQQVEL
+>1_1456
+MTTPQFSVDRTRRPVATYRAISTKDAASTQRDGEAVLEVRELSSRSGQREAEVLFHDGQW
+QLCDPEHDLVPGFTFDAFPEHPFLAEAYGETWNGWDTPVVRREVLADILTALELSHRWEG
+DVTVLEVDDYEDRIVPRLDGLYDLQQAGWTVQQVELG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002241.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002241.fa
new file mode 100644
index 0000000000000000000000000000000000000000..49c785154589a4a2af09c5ec0ebd5cffaa5da8ca
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002241.fa
@@ -0,0 +1,12 @@
+>0_2315
+MSAALDRLKQQNAHEQPPQQLGSPATMEVLTSILTAVEAQNARLDRLAEQQKKLAGFVKV
+MDEETTRRLERIAAPASTSSPSSDVSARIASIESRQNEIASTLGEFARSLNGESLNAASR
+SLVAEAQKNHAATASAIEGLKAQAAANQKLVSQVGGAVQRIEKRTEERVEKAVEQVTGEA
+SATMTANLDASNERAERIIAATAKLETRQLWSAAAAMCLALLPVVVVIAGLWMGIAGLIT
+GAQWALDVNGSVWLGIGRWLVVGVGLAGASYGLFASVRWVAGLVETWKDRGLPKWPRWRK
+>3_284
+MSAALDRLKQQNAQSGSQQQLDSPETMEALTSILAAVEAQNARLDRLAEQQKKLAGFVKV
+MDEETTRRLERITASASTSSPSSDASARIASIESRLNEIASTLGEFAQSLNGESLNAASQ
+SLVAEAQRNHAATASAIEGLKAQAAANQKLVSQVGGAVQRIEKRTEERVVKAVEQVAGEA
+SATIAANLDASNERAERIIAATAKLEARQLWSAAAAMCLALLPVVVVVAGLWMGIAGLIT
+GAQWALDVDGSVWLGIGRWLVIAAGLAAAGYGVFASVRWVAGLVETWKGRGMPTWPNWRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002244.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002244.fa
new file mode 100644
index 0000000000000000000000000000000000000000..53de4e11c9bb623aa8c4aa2b8dee994d1fd0c79e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002244.fa
@@ -0,0 +1,5 @@
+>0_2318
+MSANSAAFDHVNGFRWRLGDPTLADAEAHLYDLGVLRSVLEEAVEIAVADARADGVTWAR
+IGDALGVTHQAVIKRYRRGGAR
+>3_287
+MSANSAAFDHLTGFRWRQGDPSLADAEAQLYDLGVLRSVLERPSRSPSPTPEPMG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002247.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002247.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0c9ab9211514bde98e133087fdec34787c02bb45
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002247.fa
@@ -0,0 +1,14 @@
+>0_2381
+MDLLSPARALKHRAFLARKDAELRAEARRLRADPVFRAQYSAAEAGLKVPPLEDHPGPWA
+IAMVRNEADVIETAVRHLVRQGVDHLLIVDNLSEDDTPQVLARLAQEFPHLHVGTDHEPA
+YYQSAKMTRLADLVSAAGARWIIPFDADELWFAPQGRLVDALTRSGVPVRRAHLYNLFPT
+PDGQQWHLDTARHFDDKVAFRAWDGAVVVMGNHEVSRPGPRDGEGLRILHLPWRSFEQFA
+RKTRIGAAAVAQAELNEGEAYHWRWLGSASEDELRAVWRRLLSGEAVANAAWYPRGTLRP
+IGDTLPSSWADVQALLGPGPAEGNALSR
+>3_225
+MPSPLDLARQAKHRLFLLRRAREVVRQAAAVRGSERFAREYALASAGFDLPGLPAMSGPC
+AVAMVRDEADVIERSVRHLADQGIPHIVVVDNGSKDATPDILRRLAGEIPGLVVGADREP
+AYVQSAKMTRLADLASAAGATWVVPFDADELWFGAEGTLAEALAAADAPVLRAVMHNAFP
+AADGSGPLLDTIAHFNVKVAFRPRSGAVVEMGNHEVLRPGVRADGLRILHLPWRSFEQFA
+RKSRTGAQAIALADTPEDKAYHWRRLGALDDDALRAAWEALLAGQPLTDAAWYPRGTLRP
+LRSDTPTRWDEV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002249.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002249.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c26a8d0999fd853487c99715bd005b635fa47960
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002249.fa
@@ -0,0 +1,13 @@
+>0_2579
+MSDTLRVVASRRYGTLSPLRYPGGKAALAGFFGDIIDALRVERARYIEPYAGGVGAGIAL
+LREGIVEELVINDIDPAVYAFWKSAVGDNASFVEMVASVPLTIAEWQKQREIYRSRDERD
+ALRLGFAFFFLNRTNRSGILNAGVIGGQRQEGRYKIDARFNRETLIERLTAIGGLADQIT
+VSDLDGRTVIQRYAQDDRAFMYIDPPYVQAGSQLYLNAFDGRDHTALAAIVNTVEKAHWL
+MTYDTAPLIEKLYREHFQCRLELTYSARYPGQAEELLVASPAVAGVVKALQGQTVMADAT
+SA
+>2_1732
+MTALVMDSPLQVRASGRNAAFSPLRYPGGKAALANFFGDVIERLGISNARYVEPYAGGVG
+AGIALLRQDRVQELVINDIDPAVHSFWRAVVEYPDKFADLVVNTPLNVDEWRNQKHVYRE
+ANESNYLALGFAFFYLNRTNRSGILNAGPIGGMDQSGNYKIDARYNRQQLAERISRIGEL
+SSRITVISLDGASVARQYAGDPSSFTYIDPPYVEAGGSLYLNSFTYRDHAQLAKSLDRCP
+DGNWIVTYDPSDFIRRIYAKHDVREYELNYSANRTGKARELLIASRPVARVLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002250.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002250.fa
new file mode 100644
index 0000000000000000000000000000000000000000..25f7cb4ccb782f321772407d2488772458771281
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002250.fa
@@ -0,0 +1,6 @@
+>0_2580
+MLLAGVYFYAAAICTTIINDGGPGWLYLLVLVFVWNAFKFLWIGPVSLIQLISVRAGERR
+ERQPVPSSR
+>2_1733
+MLMFRLIWIASIHTRDLLHRYMPTNIVLGKLRTRRGLKWGVPAMLLTIPYLAVANILTIL
+IDRGAPGWFHLLVLLFIWNAFKFLVTGPVSVVLLVRARTVERRDRRLLSRSPAPTV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002254.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002254.fa
new file mode 100644
index 0000000000000000000000000000000000000000..984e7d479c4b79b98f46264d0a11c054234541cf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002254.fa
@@ -0,0 +1,4 @@
+>1_156
+MLTIASRLDVMNRLGRAMADPTRSRILMTLLEGPSYPAVLARDLGRV
+>3_317
+MLTIASRLDVMNRLGRAMADPTRSRILMTLLEGPSYPAVLARDLGRV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002260.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002260.fa
new file mode 100644
index 0000000000000000000000000000000000000000..987e0722d2ff863342d9bb4040917f4a66d6e496
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002260.fa
@@ -0,0 +1,6 @@
+>1_479
+MADYHGFYRDELGIDVLAVRPNLAGWEGESSIQDDEHVGWRAANDAEIPPVGVADFLREW
+RHRALRKARSTKFDLHWRLRMSQQR
+>4_478
+MADYHGFYRDELGIDVLAVRPNLAGWEGESSIQDDEHVGWRAANDAEIPPVGVADFLREW
+RHRALRKARSTKFDLHWRLRMSQQR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002262.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002262.fa
new file mode 100644
index 0000000000000000000000000000000000000000..11f1b84a113295c3034540f8d1fe049c2f915122
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002262.fa
@@ -0,0 +1,8 @@
+>1_568
+MLNGINPDGLSGWSQISGWVVGTALVVLILAVGAGVALAVWGRALFSPGGMRKGWTMVAL
+AAVGATVLGAGTAGTSWGAGLGTSELMPAGARPQSVAIEKNAPKQTCNRQAVRDFDKEEP
+SPDRAERERVISTLLGGQPALDGYEWGKEPTGTESSYTVVTSVKWYATGEVNGSGEPDCS
+AQNEATAECSPVEVHVARQSLTNGAQTGRTLTLTRGQNCS
+>1_569
+MSNLIHAATTVAAGVPDIAPRFDGPWMPTIQNVTGLALGTFLVVLIVAVGIGVLVWIFGK
+LSSSGRAQDVGISFVVWGIVAAALIAGAASLIGWGAGLPLF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002265.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002265.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bc29e85fc6eece15307acaf7257deccc3aae0801
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002265.fa
@@ -0,0 +1,15 @@
+>1_573
+MRRERGNNSVLEGDNPAETALIWLIGPAVLLYGAYLLAGFLAGRIHCGAATKPDSLFAPL
+GFLVGEHDPAAFGATAQGCTATTGGVIGWLIGLGVLALVLIGVAVTAWSRYQQSDKKFIK
+ELREREGLARSAEITKTVGRKSVLSRVKKVRPSIKKPAITDGAMRLGKAEGVDVFASYEE
+SVVLIGPPRSGKGVHLLIGAILDAPGPVITTSSRADNLGATAELRKKKGPVALFDPQGLT
+GQPSTLKWSPITGCEEPRVANQRAASLIGASGLGSSSSNAEWQAPAITIMECLLHAAALG
+ERTVDDLMRWGNNPAEAKEAVKILTEHPKAALNWNLVLKGIIEGDPKLLQSKWFGVEGAV
+KGLSVPEVRDVLRPNRFEETLDIDKFLTECGTLYIVGTKTGGSSAGPFLIAMMDAITERA
+RELAAKSPGNRLDPPLSLVLDEIANISGAWPGLTQLMADGGGVGISPFAVFQSMAQARNE
+WGEQQAQALFDAATVKVQLGGASNVSDLEQFAKLAGQRKIMRTSKSRGKDHTSVSEQIHD
+TEVVSVAELRRLPFGWGVLLNRNGRPILMQMTRWWDRKDGKQIKEAAGRYSKALLAELES
+KDPAPSTPTDADRAEDSVAALDPVPETAPAIPVR
+>2_2191
+MLEAIARTSKSCGKDHTSVSEQIHDTEVVSVAELRRLPFGWGILLNRNGRPILMRMTRWW
+DRKDGKQIKEAAGRYSKALLAELESKDPAPSSTPTDADRAEESVAASDPVPEAAPAIPVR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002277.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002277.fa
new file mode 100644
index 0000000000000000000000000000000000000000..824f02f6fe0713b1ba6c629ffa6effe55fbbf939
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002277.fa
@@ -0,0 +1,6 @@
+>1_1340
+MGRPPSIPAEKKTRIVLSVLAGEMSIAEAARKEKVSEQSIGRWKAEFLEAGKTALVAGRS
+GPSSREEQLEAEVAELTQALGEAHLEARVWKKSAEGRLGPSRTSR
+>3_1081
+MGRPPSIPAEKKTRIVLSVLAGEMSIAEAARKEKVSEQSIGRWKAEFLEAGKTALVAGRS
+GPSSREEQLEAEVAELTQALGEAHLEARVWKKSAEGRLGPSRTSR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002281.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002281.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f6d0e2837d37c49332aa45357be96fe6260a75d9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002281.fa
@@ -0,0 +1,12 @@
+>1_1552
+MCHGHDREGSDAGQSVSGRPAAHRAAADEGAERLHRSLTVLTTTGFLGGVEITIGLLAYL
+LTLHETGSHLLAGLAFSIGLVSLFLAHSELFTEGFYYPITAIAAGRGTWMELLRLWAVTL
+VMNLLGGTVMIALVVAGFPDLHGTLAESAHHFLDIGFSWQGAALAVLAGVAITLVTRMQA
+GTDSPTAMIVASVAGAIVLAGGSLFHSVMDSILIIGAILSGAHGVGWLEWLSWVWWVIPL
+NILGGLALTTAPRLLRSKEVREETGR
+>3_1274
+MGPVCHGHDREGSDAGQSVSGRPAAHREAADEGAERLHRSLTALTTTGFLGGVEITIGLL
+AYLLTLHETGSHLLAGLAFSIGLVSLFLAHSELFTEGFYYPITAIAAGRGTWMELLRLWA
+VTLVMNLLGGTVMIALVVAGFPDLHGTLAESAHHFLDIGFSWQGAALAVLAGVAITLVTR
+MQAGTDSPTAMIVASVAGAVVLAGGSLFHSVMDSILIIGAIPSGAHGVGWLEWLSWVWWV
+IPLNILGGLALTTAPRLLRSKEMREEKGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002285.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002285.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e11e053292641cfd7e463e93042f1eaca4215078
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002285.fa
@@ -0,0 +1,14 @@
+>1_1889
+MVPASSIHTAATARTGTTYSGPMPVSAQGPRVTVVGDSSALGSTSLMNLEMPGITVDAKE
+DRTFAEGLTRLGQLKAAGRLRDIVVLGLGVNTGGTAAAQARQAMDLVGPDRELVLVTASG
+PVAWRAFTEQAMRDLAARYPGRVAVTDWEAASRYVTDFRADRIHPRAQGLSVDAQLVRLA
+ADRATGARTVTVQAGQTLSGIAVAYAVPGGWSAISRATGVPLAQLPSLNGPTLSTVLHPG
+QVLRIRCPLT
+>4_678
+MNRSTLGTRLGASVLVVAALVSAAPAAPAVTSASGTTTTTATTGLAPGTYLAQSGDTWAY
+IAPRVGVELADLLRANGATTSTAIRAGQPLVLPAVSKHLPATSRTGTPYSGPMAPSSAGR
+RVTVVGDSIALGAASLMNLEMPGLTIDAREGRTFAQGLTRLAELKQAGRLGDVVVLGLGV
+NDGGATATQVRRAMDLVGTGRTLVLVTASGPVAWETSTNTAMRNLAATYPSRVVVADWKR
+ASAYVTDFREDRIHPRGQGASVYARLVRLAVDTAPVLRSTTPRTVTVQAGDTLSLIATRY
+GVTGGWQALATLNKISDPHMIRVGQTLLLPATSTTTTPATYTVLPGQGWYAVSRATGVPV
+TQLLSLNGATLSTEIHPGQRLRLR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002287.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002287.fa
new file mode 100644
index 0000000000000000000000000000000000000000..04b93059b8c260ab39e88905498b86d623c5408f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002287.fa
@@ -0,0 +1,8 @@
+>1_1998
+MNQPSMATLSSGKITLRDARRGTTRDVELEPFEMAVHPLHDRSTGRPLTPLTWFETINLC
+NELSNAEELQPAYTRAGDGRSVTWNTSADGYRLPTEAEWEYACRAGTTSPAYGPLEDIAW
+TGLDHLEGPQPVVRSENP
+>2_2167
+MTPPAAEGHFSRATLTDLLCEKFIACRVKSSLHLDSDARRGTTRDVELEPFEMAVHPLHD
+RSTGRPLTPLTWFETINLCNELSNAEELQPAYTRAGDGRSVTWNTSADGYRLPTEAEWEY
+ACRAGTTSPAYGPLEDIAWTGLDHLEGPQPVVRSENP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002291.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002291.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a40fe87ffb5f22774f03b61ded0fa3e2d655309c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002291.fa
@@ -0,0 +1,34 @@
+>1_2174
+MNVNDKAALTVAIDEFDEFFAAVNHGREPYAWQRALLRQVVTTGRWPDAVVAPTGAGKSS
+VLEVHVFAVAMTHAPGWEGARAPRRLWHVVGRRALVDDMASRAEAVFDQLAEITDVPIEA
+PLSRVAAALRRISPAGQPGSVTTLRGGIAPERGWQDDPVSCQVICATPDMAGSRLLFRGY
+GSTAGMRPREAGLIAYDSVLILDEAHLNRQLLTTARRVASLAGESPLAAHVPVLQVVETT
+ATPAGLAPAQTSIGVELSDIRTGAVGEALLRRLDRPKPVHLHLDGPWLAGGIARETTQGA
+QEIARMVTDAVQAGHTPVGVVMNRVASALAVHRALRGLNGGLDVVLVVGPRRRWEQALER
+SRTPDVYVATQAIEVGLDLDFGFLITDIASGSALAQRAGRLNRTGARESAPMHVLCPSAD
+PTAKTAAPYEVQDITDALEWLRDRAEDPKGVSPAALLENPAPSSTPARPVLSEIEAARAA
+LFSRTSEALAVEPDLTLWLRDSLDAETDVAVVGRRLPRLGEDAGEDWSGLDQAESAALLA
+TAPPQPHEAYPVTLSRLRLLLAGGRRGRATPAFVRRGRQWTLVDPDASGHGIVPGDVVCV
+PHDWAATHHHVLVEDGREPVGDVLDPRSADGTMLSLEPVKASQRRVVFMTGVASPGVQDH
+LRCSLLEVCADLQEADVPLTLLSVLDALDDRGQSAWLTAYLGQWADPDLVARFDVRVHVG
+GRAPGSPQQAAWVVFELLDAADPDDAQLSATTGRSPVSLAEHQRDVADRAGEFAQVLGLP
+EGLKRTLTVAGAHHDDGKSDDRYQAWLTQGVAGVDEPMAKSLLSALPFRQSRFLPAGWRH
+EQLSAAMLHAHADGADALAVRLVGTSHGHGRGTFLMGAESLVHPEAPPHVRMAAEELFDV
+GVWDALVLSVEQTWGLWAVAWLEAVLRAADVTISKEGR
+>4_2107
+MNVNDKAALTVDIDEFDEFFAAVNQGREPYDWQRALLRQVVTTGRWPDAVVAPTGAGKSS
+VLEVHVFAVAMTHSPGWDGARAPRRLWHVVGRRALVDDMASRAEAVFGQLAETTDVPGDA
+PLSRVAAVLRRISPAGQPGSVTTLRGGIAPERGWQDDPVSCQVICATPDMAGSRLLFRGY
+GSTAGMRPREAGLIAYDSVLILDEAHLNRQLLTTARRVASLAGESPLAAHVPVLQVVETT
+ATPAGLAPAQTSIGVELSDIRTGAVGEALLRRLDRPKPVHLHLDGPWLVGGTARETTQGA
+QEIARMAADAVQAGHTPVGVVMNRVASALAVHRALLGLNGGLDVALVVGPRRRWEQALER
+SRTPDVYVATQAIEVGLDLDFGFLITDIASGSALAQRAGRLNRTGARESAPVHVLCPSAD
+PTAKTAAPYEVQDITDALEWLRDRAEDPKGVSPAALLEHPAPSSTPARPVLSEIEAARAA
+LFSRTSEALAVEPDLTLWLRDSLDAETDVVVVGRRLPRLGEDAGEDWSGLDQAESAALLT
+TAPPQPHEAYPVTLSRLRLLLAGGRRGRVTPAFVRRGRQWTLVDPDASGHGIVPGDVVCV
+PHDWAATHHHVLVEDGREPVGDVLDPRSPDGTMLSLEPVKASRRRVVFMTGVTSPGVQDY
+LRCSLLEVCAGLQEADIPLTLPSVLDALDDRGQSAWLTAYLGQWADPDLAARFDVKVHVG
+GRAPDSPQQAAWVVFELLDAADPDDAQLSATTGRSPVSLADHQRDVADRAGEFAQILGLP
+ESLKRTLTVAGAHHDNGKSDERYQAWLTQGVAGVDEPMAKSLLSALPFRQSRFLPAGWRH
+EQLSAAMLRAHADGADALAVRLVGTSHGHGRGTFLMGAESLVHPEAAPHVRMAAEELFDV
+GVWDALVLSVEQTWGLWAVAWLEAVLRAADVTISKEGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002297.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002297.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6e5c6981b4085504eddad1eb4e445e47b1bb47cc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002297.fa
@@ -0,0 +1,25 @@
+>1_2218
+MSTFQTPQYTIVELLQKARSGELQLPDFQRPYRWDDERIRSLLVTILRGHPMGVIMTLRT
+GGQNVRFKPRPITGVPAEGLKDPELLLLDGQQRTTSMVQALTGDGIVDTEDVRHHKLRRR
+YFVDVVKALGDVREQEDAVVSLPDTGIVTENIGRDVVLDVTTEEKQWELGLMPVTVLFDS
+ADCFAWMMKYQQALPERMEITQRFLSSVAQAVQTYKIPAIELDKDISKDAVATVFEKVNT
+GGLRLDVFELLTATFAGDRAYYEETGEDFRLAEDWALTEEVLRTYPVLTDMKSTDFLMAV
+SVLATLAKRREALAAGKTGQQVPQTSARREDILGMSLEDYRVWAPRLRKALPTVARHLRD
+LHIHDSRGAPYSSQVVSLLIITTLLGDRAEEHAVRARLNQWFWCGVLGELYGSTITTQLA
+KDAEQIPEWSLGKSAETPEAIIRASFSESRLGSLRTRLSAAYKGVYALIMAQQPPAKDWM
+LDQTLDFQSYDDLQVDIHHVFPRKWCDENGIEPWRRESIINKTPLAKKTNIRLRGDSPAV
+YTERLDDKGLTPQQVDAQISTHAIDPALLRAGDFDAFFNDRRRRLVSMIENAMCKPVVRD
+WEVDSESTDAPENFNDPAEMEADEPAGDEEAANVAD
+>3_1969
+MPDTFGHHPWTVQDLVSAVDSGHVRLPDIQRPFVWSNAKARDLMDSMYKGFPVGELMFWE
+NADPEHSRAIGTLEKSQSGSMQVIDGQQRLTSLYAVVKGKRVVREDYSQENIVIAFNPLT
+ERFDVPDNRIKRSSEWIQDIKTVFASPIDARSDYLDGLEKARGGERLSREDERRIEEAIN
+RLSRVLAYQFQVVQLKKEVSRETVADVFVRINSEGVKLSSADFILTWLSVFWEEGRQQLE
+DFARGSRFTPQELARMDETTVRWTPKNPYLTLDPGHVLRVVVAVGNRRAPLQDAYNALRG
+RDPRTREIVPANRERELAKLKDGQARALDPKNWDEFLKVIERAGMRTSAMVTAKNAVIYG
+YALWLIGRTEFGVPVDDLREVMARWYFMAQITGRFSGSAETRAQEDLNRLDGLERTPEAF
+TTAIDSLVSTTLTEDWWTVTLSEDLHTSNMSGPAYTGYVAALNILDADVLLSTLKVKDWI
+DPNRRPVKGVEKHHLFPKDYLKGALGLKSTRQINQVANQALVEWSDNIDISNEAPSAYWP
+AQVTEKAIQGERLAKQTWWHALPEGWTEMSYTDFLAARRKLIAGVTREGFRKLSDPNYQP
+SPPAHPVPASEPVLPTFEQLVLAGALPVGTHLLPTDGRTDSIAEVTPDGTILLDDQEYTS
+PGLAAKADGAEDEDGWLYWSADLAGQATILDEVRRRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002300.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002300.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d2cf3998c5a13a366068ac0f96c8b4c30641b887
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002300.fa
@@ -0,0 +1,12 @@
+>2_44
+MRLIALPSGESIPVLGQGTWGWGEDPGRRGDEVAALHAGLELGMTLVDTAEMYADGGAEE
+VAGEALAGRRDEAFVVSKVMPSHASRSGTIAACERSLKRLGTDRIDLYLLHSQGRYPLED
+TVSAFHQLVEDGKIRYWGVSNFDHRDLADLQDVPGSSGLATDQVLYNLSRRGPEYDLLPW
+CADHQLPVMAYSPIEQGRILHDTTLNDVAARHSVSPAAAALAWVLRRDSLCTIPKASSPQ
+HVRDNATALDVELTRDDLDALDRAFPPPSGPRPLEML
+>4_1935
+MTLPSGESIPVLGQGTWGWGEDPGRRGDEVAALHAGLELGMTLVDTAEMYADGGAEEVVG
+EALAGRRDEAFVVSKVMPSHASRSGTIAACERSLKRLGTDRIDLYLLHWQGRYPLQDTVA
+AFHQLVEDGKIRYWGVSNFDHRALAELQDVPGSSGLATDQVLYNLSRRGPEYDLLPWCTD
+HQLPVMAYSPIEQGRILDDTTLNDVAARHSVSPAAAALAWVLRRDSLCTIPKASSPQHVR
+DNATALDVQLTREDLDALDRAFPPPSGPVKSF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002303.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002303.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e46ff010654e270ff6206fb42132bfee88fc026e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002303.fa
@@ -0,0 +1,10 @@
+>2_292
+MSDQNAVLVEYVDPDAVSLPLRVRARSEVWLPAFVVAVVLWVLFVMILLGLPPVLFEDPS
+AMLVLFRWLAVVGFIPLSVYVAYTWMAWRRPRHLMVDEEAVWTDSWRVAWSDVEAIWLNP
+THGLAPDKKTQVGFAVHERAWTDELRRGNRWDSGFPFGLGGMKPRDGMIMTQFATEPPIQ
+SLLPLFERLRARAHGQPPEREKLWPGQEPWDGWVGPWS
+>2_320
+MTVSDQNAVLVEYVDPDAVSLPLRVRARSEVWWPAFVVAVVLWVLFVMILLGLPPVLFED
+PSAMLVLFRWLAVVGFIPLSVYVAYTWMAWRRPRHLMVDEEAVWTDSWRVAWSDVEEIWL
+NPTHGEAPDKKTQVGFMVHERAWTDELRRGNRWDSGFPFGLGGMKPRHRVIQTQFATDPP
+IQSLLPLFERLRARAHGQPPEREKLWPGQEPWDGWVGPWS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002305.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002305.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bf8ece1cdff07a3be779c7f9f36711df83081e54
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002305.fa
@@ -0,0 +1,5 @@
+>2_309
+MTQTPTPHLAGPSPVKVGLLVLAICAVGGVIIGAVAGLTDGGSVENMFIGAVYAGFIGFF
+LPGLPAALIAGLVAAARGRRRG
+>2_329
+MDQDVATEAEQTVSEDGAVYAGVIGLFLPAALIAALVAAARGRRRV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002307.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002307.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8db6cfb35a116300b831403c4e6f0fbce1078f5d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002307.fa
@@ -0,0 +1,14 @@
+>2_313
+MGAPRELFAEHALRGEIVVLDYAAGRTRSGLPVRRHHVVVRAGDRLVHSFRWYVGAAREV
+FEVTLTFDEEWLPHRLWEPVAEAVRSARAPLAGEVDVPAVVPGAWDERPETVVVESGPGL
+DVAESLVEGLEVISASRKRWRSWSEADEVEQAVVRSMAPTLSARGGLRGRRTEVDVYAVL
+DEAVVVRRRWWGDQGTEIIEREVLRVPGRVAPWAMFVGMDVRAGWMREVSARRPVDAEAR
+SSDAEWEVIAGGERALGLLHGPRDVWAVSTGGGGLVAEWWQLPGEGLLGVFRDADSAQMM
+VGPVDGWTIYLLVLEAWLA
+>2_319
+MHPTVALRHFTEPADGNVASASFREAFLGGQEVVEGFLLLSYEAFFTGRGLPGRRHHVIG
+WEEDLVWHSVRWYVGSGAEIVELTLTAEAGADLEIWGGQCDRMIRNVVCQGAPEPASNLC
+WPEVPADVRAQDSWEVVTEQGLNPPWLESLRAGYDAVQEQAPWSAWAREPSLEQRRVLEQ
+ELPILSGVGERSGQGFRIEACLDGRGGAVVVVVPEGEGDGTNVRRGVRTVPVSLVVPVLL
+TWAGLRADWLRDEVMEAPGDVAPTEMAELWRGRRGADGVGSEASADWWRWWNQEGEVVAE
+WVQPLHRAPLAVFRDESRCVGVPVMPGVLYSVLQATVQEIAGSPHM
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002317.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002317.fa
new file mode 100644
index 0000000000000000000000000000000000000000..42072c5a6aec83438d944920f7aad4bbc0ff126f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002317.fa
@@ -0,0 +1,10 @@
+>2_620
+MSQLMGDAGGGPATPWSHLEFSTPEGPVLCHPTDPLPDLGTIMSVRTPRSHALSRHVPVQ
+TFSATNTDVVAVESGLEQELVLVLDRDPAQDRLVGQPLTVTWARQSGGTRRHTPDLLTLT
+HEGAVTVWDVRPEGRRDPKFWEAARCTRAVCEHNGWTYELFGGLPEVHAINLRWLSSYRH
+SMPWYADLRDTLERLACTNSATIGTLLGADDGSGELISAMWHWAWDGRLQLDLTRPLKTS
+TPVRWEPR
+>4_2159
+MLSLDRDGQVCLWDARPSRRQDEEFLEAARTTEACARLLGWDYRVHAGHGPAYEANLRWL
+SAFRALKPWYPEAEQRLGQLLAHGERSVQEVFAVDDGTGELISGLWHHVWAGRVETDLDS
+PLCGASILRWVG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002319.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002319.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8264ce79f9aea8187dd4bfc3458255638cb40c44
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002319.fa
@@ -0,0 +1,10 @@
+>2_649
+MSAEPDGMRPHSPSAQEAYAARAVEYADLLGRMDAVADADKRLVEAWAQRTGGVLADVGC
+GPAHWTAYLHSLGHDVRGIEPVEEFVAHARRAHPEVRVERGSFETLPTAAVDGILAWYSI
+IHTPPAEMPHLFEHAHRSLRPGGSMLLGFFAGDEVEPFDHAVTTTWHWPVDALSRLLTTA
+EFTVVDRGTRQDPGARLHGWIEADRE
+>2_918
+MEAGTLDAEGGTTITADDVHGENISSCAAYGARAAEYAELLGTMAAVADDDRLLVEAWAH
+ETGGSLADVGCGPAHWTAHLAALGHDIVGVEPVDEFVAHARRVHPGVRVETGSFRTLPAS
+TFDGILAWYSMIHTPPPEATLLLEHAHEALRPGGSLLLGFFAGDRVEPFDHAVTTAWYWP
+LDDLTSVLTAAGFTVTDRGTRLDPGTRRHGWMRAHRN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002320.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002320.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5527396a9ddad307a7a81078e4d1849feb17dd68
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002320.fa
@@ -0,0 +1,10 @@
+>2_650
+MDLAPSSSPTIELSWHADLTPGQLDDLNRLFAAEYLEDFGEWDPDQPYGYAPHDMHVIAT
+LDAQTVGHIGWARRSITVGDHHVTIAGVGGVLVTPSGRGHHLGQRLMRAAVDSMRAHSDA
+EFGYLGCHESVVPFYVSCGWRRIVAAERYIGLNGQPSESAQGDPLLVMPLRNAKQPWSAG
+EIDLQGRPW
+>2_682
+MDLVPSSSLKIELTWHTDLTPGQLDDLNRLFAAEYREDYGEWDPDQPYGYAPHDMHVIAT
+LDAQTVGHIGWARRSIAVGARPVTIAGVGGVLVAPSGRGHHVGQRLMRSAVDSMRVHSDA
+EFGYLGCDESVVPFYVSCGWQRIVAAERSIGRGGQPTQSTQGEPLLVMPLRGTEQLWPAG
+EIDLRGRPW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002326.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002326.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0119a6522561db1151c4bce6817f28fe0824e22d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002326.fa
@@ -0,0 +1,16 @@
+>2_818
+MAFLGPGEHFRDLPGAFRTLENALAVSRVAGGLHAVDASTVGAVGMVLAGAGEASKDVTA
+RPLAPLRDLPPQRASALRETALAYLDAGTNVAETSRRLFLHRNTVLQRLEQLGAVLGPDW
+HTPPRSLDLHLALLSAARDDGGAPGAPPVRSQPRRRAEELRRPRSPAARC
+>3_81
+MSDRLRDLVLAFAGGTASASQVDLILEAGGLDDDLVQAVSRLRQEGRLARRQREAARILV
+DAATLITGARDMDEILELICRRTRLLLDSDMAYVSLNDVDQGQTYIRTTDGVLTSAYRNL
+RMPLGTGILGQAAGGATVSQTGDYLDDTSFPHIPAVDEAVRGEGVVSILAATLRVRGRRI
+GALLVADRRPRTYTPDEVDLITQTAGLSAVALSRNEEMRDLQTALDDLTVAREEIESKNV
+LLSRLGRLDQELFSVLREEASPADLAEVIGQAIGTEVKALFPADLPAHRTPAAPVVSEHP
+CQDSPNGMATLVRAFTGHRELGALEAHGSLDRDERFLFERGATALTALLLAQERGWATQM
+QQQHRLVKDLENASTETWRSVAGRLAPHRLQEGGTVRVLAVRTEQLQDTRMALRELLARR
+GGVSSIRYEVLRVISPNLTGRELHELLVSRDRSAAVCEQEALLMPEDIRVSLQGVQRTVR
+AMAALNITGVADPRWDLGLTGLAVAQLPPATVDRLVYRALEPLLSYDRQQGTELTHTAWS
+FLECDGRVSVAAERLHIHPNTLRQRIGRIGTLLGEDWHQGSHRTDLHLALRLHRVQSASR
+TG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002328.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002328.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3f53b351773ff35abc566509d90260739f7bea0d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002328.fa
@@ -0,0 +1,7 @@
+>2_919
+MHGEERSTRAALERAGHVGLASRIGLDGTLVPPDGRAGPGAPDAAGVGYASRVPEQRIIA
+RRSLGNAPTRPDGLRLASLAALGEEQFSTHMLAASGGDPFDTSTEESALEDLLEIIEGAG
+DHFDPHAWYVVGDGEGEIGVVLPQPLPDKPGTGTVFYVAVLPSRRGRGKGRQLHQFGLSE
+LARRGCTEYVGSTSVDNAPMVAVFQANGCELEH
+>2_1270
+MAVLPSRRGQGMGRRLHALGLAELARRGARKYIGSTGRKKAAMVAVSRANDCIVEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002331.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002331.fa
new file mode 100644
index 0000000000000000000000000000000000000000..dc8839b02f4cd497674fcf800cdf6a9520eb6930
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002331.fa
@@ -0,0 +1,18 @@
+>2_1171
+MGVLKDLKERFERERVELHLDDIQGLVLRERPEPYVGAHAMLTVEEAEGGRDFVRRLAEH
+VTSAQDWADDLQSWTGVAISFAGLRALGLPEDPLASFPLPYQQGMAARAQQLMDTGPNAP
+EHWDEAFTQDACHIALTIYAADADALDAALDQAQQVLDHSTGVTLVATHRFGVDELNKNP
+FGFRDSISQPTVAGSGVRPQPGQERSISAGEFILGENSETGSPLAVPQPDVLGRNGTYVV
+LRKFASRVGAFNEYLASQSPDPEEQHRIAAKMFGRWRSGAPLVLSPDHDDEALGNDPERR
+NDFTFEDDPKGLMCPHSSHMRRLNPRDSDLSIMTDVNIKRIIRRSSTYGPGWSPEVTSAD
+DAKEDRGIYFIFISARAFDTIEFMQQEWINGGNFVDLGSERDPIVGLHEDDPTQGRFTIP
+AEPARKRINGITTFNRMAGGEYLFMPSLRALRWIGEAGWTSDQSDAEA
+>4_1480
+MGVLKDLKERFDRERVELDLDDIQGLVLRSRPEPYVGAHAMLTVEEAEGGRDFVRRLAEH
+VTSAQDWADDLQSWTGVAISYAGLRALGLPEDSLASFPLPYQQGMAARAQQLMDTGPNAP
+EHWDEAFTQDACHIALTIYAADADALDAALDQAEEVLEHSTGVTLVATHRFGVDELNKNP
+FGFRDSISQPTVAGSGVRPQPGQERSISAGEFILGENSETGSPLAVPQPDVLGRNGTYVV
+LRKFASRVGAFNEYLASQSPDPEEQHRIAAKMFGRWRSGAPLVLSPDHDDEELGNDPERR
+NDFTFEDDPKGLMCPHSSHMRRLNPRDSDLSIMTDVNIKRIIRRSSTYGPGWSPEVSSAD
+DAKEDRGIYFIFISARAFDTIEFMQQEWINGGNFVDLGSERDPIVGLHEDDPTQGRFTIP
+AEPARKRIDGITTFNRMAGGEYLFMPSLSALRWIGEGGWTSDQSAAEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002334.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002334.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cce27fa33ef266787b3d29a5ffcea98d1501035e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002334.fa
@@ -0,0 +1,6 @@
+>2_1187
+MSVTKGLLVRFDALPGKEDDVKDFLDSGRALVAEEPATIAWFAIRLGPSSFGIFDVLPED
+AGRDAHLSGPVAVALGGQTGAGALFSEPTIEKLDVLGSKLPA
+>3_358
+MSVTKGLLVRLEALPGKEDEVQEFLGIGRGLVEEEPATVAWFAIRLGPSSFGIFDVFPDD
+AGRDAHLSGAVAKALGEQTGKLFSEPTIEKLDVLASKLPA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002335.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002335.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4926609434d8dbf84a27beecd4d61db80fc8b968
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002335.fa
@@ -0,0 +1,8 @@
+>2_1271
+MSTDLLTLRLPAAHAADHVRGDFEFRGLDTGTTDDLARCYLMGYPPGVAASGLAEAREEM
+DATFRGDYGELRADASATAWVDGRLAGAIMVVTRSIWDADLAGPFIIDLFTDPAVRGKGV
+GRALVQHAVDTCSAAGDAAVSLRFGEGTSEAAMGIYRRLGFRPRTGTQRGG
+>3_1732
+MADDLAQCYLMSYPPDVAASDLDEAREEMNATFRGDYGKLRADASTTAWVGGRLAGAIMV
+VTHSIWDEHLTGPFIIDLFIDPHARGKGIGRALVQHAIATCCDAGDHTLSLRFGQGTSDA
+AMRIYQRLGFRPVG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002337.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002337.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d62e4b68cc29c063c84b7ceb604442ea69537ac8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002337.fa
@@ -0,0 +1,12 @@
+>2_1748
+MRIAVTTPMGHVGRHVTSMLIRSGVRPLLLARRPENVTPGLRKHADIVKANSTDPAQVTA
+ATQGVDAIYWVDPSVMSSDPLADYTLATEALVKAVTANGIGRVVFQSSIGAEKRHGVGEI
+DGLAGTEVALDTLDVDVTHLRCGYFFTNLLLDIDAVRQGQLTTVLPLDQPMSWVAPRDIA
+EVASLTLLNTQWHGHRVQAVHGPQDLSWRQVAETLTAHVGHQVHAEQITDTEMLQRYLAA
+GMAPMMADAILGMSTGLRDGFRPEQPRTLATTTPTTLTSWIHEELIPVL
+>2_1782
+MRIAVTTPTGNVGTHLTGMMIRAGVRPLLLARTPSKIPIDLLTHVDVVEADSTDPEQVVK
+ATRGVDAIYWVDPSTASADPLADYARATQAIVAAVEANTIARVVFQSSVGAEKRHGVGEI
+DGLAATEVALDRLDADVTHLRCGYFFTNLLLSMEDVRQGRLRTVLPLDHQFSWVSPRDIA
+EVAALTLLNPSWHGHRVQAVHGPQDLSWNDVAALLTDLTGRHVQAEQISDDLMRQQYLTA
+GMPPAMADAVLGMSTGLRDDFHPEQLRTATSTTPTSLAGWMQEELIPAL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002339.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002339.fa
new file mode 100644
index 0000000000000000000000000000000000000000..15a4551a038522a85b719e77dde0deec2c7fda35
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002339.fa
@@ -0,0 +1,14 @@
+>2_1784
+MEGLERVGSVLGMMLQVCVNGARDIAEHPALSADPVRVAAECAEAVAAGADAVHVHPKDA
+HGQDSLQNPDVGRWVREVRARCAGVPVGVTTGAWALPSVEDRRQAIVGWQTLPDFASVNW
+HEPGADQIAATLLDRGIGVEAGIWHQEGLTAWLASPLRSRCLRVLIEVQDIPAEEVESEA
+LVLVQGVRRAEPAMPLLLHGEERSAWPALKLAGRLGLDTRAGLEDMVTFADGRPAPGNAE
+LITVASHLRGRSLEEEPTVMKPYSVPLAEARTAFLAALDAFEEGASSLDDLTLLGVSHVH
+GWSRLDCLVHVRLGLQEMLAGLAARTDDTPDVDAASYWTTYEPEKDPVPGILMTRRTASA
+YARPRNALEHLNQVSAGLRHAADTLIEESIAFQGHVLTAGDMLATWAVELAVHHHDLALP
+AGAPAPAPAAVHIGRLTAEALGSTSGARAGAEDDLAVMLAGFGRR
+>2_1829
+MSVAGEAERFAQQAHQFAEAASGLDDLALLDPSLCRGWSRLDLVVHVRLGLEEMAAGLGV
+RADDAPDHDDVTYWSSFAADEQDPVPGHMWLRRTASAYARPTDATAHLRDAAERACAASA
+LQDPRPVRFQGKVLSVMDFLRTWSVELALHLVQLDVGVVPSAAGLARRTLEALTGAPLPV
+RLTDHSALRVALGADPWPADEPGGGAYPLGL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002340.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002340.fa
new file mode 100644
index 0000000000000000000000000000000000000000..25b6ec1a9d533e589074b225aa56cbbc9cbe85b9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002340.fa
@@ -0,0 +1,16 @@
+>2_1842
+MAVEMGLWRADGDRLSRITPTAIGLESQLETYIESDPGMLGETLLVLGPQVATAFAGFID
+LLALDETACVHVIELKRDRTPRDVTAQALDYGSWVSGLGRAEIQSIFEAYKPGVALEEAF
+TECFNETLPEELNSAQTFTIVAASVDAATERIVRFLNEDFGVPINVVFFRHFADNGAKYL
+VRTWLVEHEGQQQSAATPARQTKTREAWNGSDWYVSFGEDSGTRQWSDGRKYGFVSGGGG
+KWFSQTLKNLPVGARVFVHIPKTGYVGVGTVTGEARRFDQLQVEVDGVDRLVKELPLSGS
+YAHEGDIEDVNAEWAVPVAWTHTVPRERAIWKNGMFANQNTAAKLRQKFTIEHVLEEFDI
+AD
+>4_866
+MAVEMGLWRADGDRLSRITPTAIGLESQLETYIESDPGMLDETLLILGRQVATAFGGFID
+LLALDETACVHVIELKRDRTPRDVTAQALDYGSWVSGLGRAEIQSIFEAYKPGVALEEAF
+AECFNETLPEEVNSAQTFTIVAASVDAATERIVRFLNEDFGVPINVVFFRHFADNGAKYL
+ARTWLVEHEGQQQSAATPARQTKTREVWNGSDWYVSFGEDSGTRQWSDGRKYGFVSGGGG
+KWFSQTLKNLPVGARVFVHIPKTGYVGVGTVTGVARRFDQLQVEVDGVDRLVKELPLSGS
+YAHEGDIEDVNAEWAVPVAWTHTVPRERAIWKNGMFANQNTAAKLRQKFTIEHVLEEFDI
+AD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002341.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002341.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b1e21f1bb7c2b2bdc692a40cd7cb7d756e105290
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002341.fa
@@ -0,0 +1,16 @@
+>2_1845
+MWALVELGKRATSEPAAQLRLETLDDIEFDSAGSPAELLQIKHHTRGDGPLTAQAVDLWR
+TLNVWMDLPSADKLVLRLVTTRTLSEESGLIRLRDGENRDTSVALEELLKAARTSTSKAT
+DKWREKFLHLNETARVELVDRIIIDDGSLPAAHIDKELVRTFRYAYPTGRDDVFLHLLKG
+WWSGVSVQLLSRTLEAVTGQDLIVQVTEIADQLKSDALPIDPAVMQEHDESISDLYKDRP
+FVQQLLWIALENNRLWKAIRDYHRSFTQRSFWLRHQLLAETELDRFAFRLHDEWEQTFDS
+RIAAMKREGRTDHDVVGQEILEELARESRARLRDRFDEPWFNRGMFHALADGELGYRVGW
+HPDFESKLEEMLSHVSST
+>4_863
+MWALVELGKRATSEPAAQLRLETLDDIVFDSAGSPAELLQIKHHTRGDGPLTAQAVDLWR
+TLNVWMDLPSADKLVLRLVTTRTLSEESGLIRLRDGENRDTSVALDELLNAARTSTSKTT
+DKWREKFLHLNETARVELVDRIIIDDGSLPAAHIDKELVRTFRYAYPTGRDDVFLHLLKG
+WWSGVSVQLLSRTLEAVTGQDLIVQVTEIADQLKSDALPIDPAVMQEHDESISDLYKDRP
+FVQQLLWIALENNRLWKAIRDYHRSFTQRSFWLRHQLLAETELDRFAFRLHDEWEQTFDS
+RIAAMKREGRTDHDVVGQEILEELARESRARLRDRFDEPWFNRGMFHALADGELGYRVGW
+HPDFESKLEEMLSHVSST
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002342.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002342.fa
new file mode 100644
index 0000000000000000000000000000000000000000..de0a9931541ceef42a3ef8c3adb9b0d3f5c010b4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002342.fa
@@ -0,0 +1,12 @@
+>2_1846
+MVTHDDLEITGKRSYYISHQCELSPDCFPVCVLIVSSIYDLFGEECLRRLIEHEEPRNRS
+IVRGEPVVESEVSDEVVADPVLSASHAAERDAASRPLNGYGQLNWVKSDVMLGTLKPKVA
+RIVRHQFRHRVDGGTKSGGGIVALAKVFQPRELSAIPAFSVSQFSEISSDVDTSFEFLAD
+PALEECDSLASLTARCDRRFLLGNGIEFNNVFSECLHERFAARLQTFNRCLAPRGDPLRR
+FEASFQSVQE
+>4_862
+MVTHDDLEITGKRSYYISHQCELSPDCFPVCVLIVSSIYDLFGEECLRRLIEHEEPRNRS
+IVRGEPVVESEVSDEVVADPVLSASHAAERDAASRSLNGYGQLNWVKSDVMLGTLKPKVA
+RIVRHQFRHRVDGGTKSGGGIVALAKVFQPRELSAMPAFSVSQFSEISSDVDTSFEFLAD
+PALEECDSLASLTARCDRRFLLGNGIEFNNVFSECLHERFAARLQTFNRCLAPRGDPLRR
+FEASFQSVQE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002346.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002346.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b550d24ba97bebcec3e3f857388809399cf77ae8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002346.fa
@@ -0,0 +1,28 @@
+>2_2261
+MALHVGLYSPWNTTDPRAWSGVISPMAEALRDVFDVTVIPPVGQRDARGERIRTRLRGMT
+GRRSLPTHTMATARLRSAVLAHQLRRHTGAPLDALVTIAASTDVLSLPDDLPIVQVTDAT
+FPAIRGFYPLATGLGRRNEREGMRVEEAGAQATDRYLVASEWAALSLTDVVGVAPHRVTV
+APFGPGTPPPADARRREPGSSLRVLAVIADWERKRGDDIVAAVARAREFRDLTLTIVGRA
+PEGLPSWVNAPGVVDRARLAELYRGHDVLVDLALANAAGVVMTDALASGLPVIATHVGGV
+DTIVRDGKTGWLVQPSGAVDATARVLTTLDAAAVTRASAAALADARARLSWRAWAATADE
+VVRAAVAERRGQASPEAQRRRALMVTPILPSTGGQESAGEHLVNDIAQVIAERSELTMLS
+SDGPANRRALERGVAFAHRLLTSAPLRCDRLPRLLGVAPALNARTVEQVRGLVASADLVD
+LQWEESALLLGPLRRMNADARIVVTLHDVLSQRFARQRELQSSRLRKGVWAARQAAATML
+EAHIVREADAVVVLSQKDADLLPKRGRRARIHVVPPAITGPLRPLRDGTGAPFLLFVAYM
+ARWENEDAMHWFVTEILPRVRAEAPDVRVAVAGGGLRDHVVAELEANDVEVLGFVHDLEP
+LYEEASAVVVPLRYGAGVKFKVVDALVRGVPVVTTTVGNEGIHPADAAIVADEPAAFAEA
+VTAVLANLPCAERYARSRATDVAREFGPNRFRARLQEVYR
+>4_494
+MTPRIGLYSPWDLTDPRAWSGAAHQMAEALAAVADVEIVPPVQVDDAPLERARTRARGAR
+GRRSLPRHTMATARRRSQALSQALEARVGPSLDALVAIAGSTDVLRIPANLPLVQVTDAT
+FPAICGFYPMATGLGRRGEREGQRVEHASAVRTDRWAVASQWAADSLVADVGVPASAVRV
+APFGPGVTPTSAPRVRRPQRPMRVLAVIADWQRKRGDAVVDAVQQARRHADIELTIVGHA
+PDDLPIWVHLEGVVQSDRLSDIYADHDVLLDLASANAAGVVMTDALASGLPVIATRVGGV
+ASIVQDGRTGWLVDADRAAEQAANQLRLLGESGGADQVAAASKAAAEDAARRLTWRSWAA
+AVMESVEEAVAAHAATERRIVMISPLLPSAAHQETAGEKLVRQTVDTLTADGARVTLVST
+PGPANRRAILRGGVPDHRLLSPARRITGRAARLLDLAPVLSPADLAPVRGLLRTADVVDL
+QWEESGILLPALRLTAPGARTVVTLHDVLSQRFARQRDLQLRPARRAVWEARRRAALAVE
+RLVLAMADDVVVLSDKDAALLSSRGRARVHVVPPPIPGSLRPERRDLQPTAEPQLLFVGF
+MARWANEEGMHWFVTEVLPRIRAELPGARVAVAGGGHRDHVVEELENSEIEVLGFVEDLE
+ALYNAADIVVVPLLSGAGVKFKVVEALVRGVPVVTTSVGNEGIHPADAALVADDPQDFAD
+AVLDVARYPQIAESHARAHASAVAEEFGVAGFRQRIKEIYR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002349.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002349.fa
new file mode 100644
index 0000000000000000000000000000000000000000..98a9719583e5d61bd9240e2015e763fab08bb7fd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002349.fa
@@ -0,0 +1,34 @@
+>3_734
+MSADAWTGTATGDVAGRCHRDAHGVPTLVAASLPELAYLQGWHVATERAWQVDCEHRRVT
+GMGAEVFGPPAVANDVAARQMDLDGAARRAFDALDDAEDRAWFTRFADGVNAGLDAGARR
+APEFAAHGVKPLPFDPHTALALHLGYNVWLTNAPAALFRTLLAERFPALAAALISPRPDA
+DGSNAWAVRVGAEGAPLVAADPHRLLELPGVYQQVRLVVEAERPRDRVDVVGLAFPGVPG
+VPHVGQSEHVAWVTTSAMVSSLEMVLEDAPEGPEVLDARTERVHVRGGDPVDVRVAHTPR
+GRLVDVPGAGPVSMRFPAWDRADTGLPSARRLLTAASAAEACAVLDGHVEPVNRVIVADR
+RTVLTRHAGAVRRRDRRSAWGAARASALGRGSADGSLDQRWVRWPAPAAADDVVVAANEP
+HPDTACLTVDACAPWRSRRIREALEALAPQERTVDAMAALQTDTRTPGAPRAWLADAVDA
+LVADGVLAAESVPAWAGDAAAGSAAARWWLLVEHEVAAALIAHLPPASRALLGGPWAPWG
+DAAAWVGAALAERGPEPLRAALGITASTRDLVRAAVAAVDDAAEPPGPDGAARTWGEAHA
+LTPFLFTHEHPGGPDEPGLADVLDTIGSVRVGGTADAVCATSHAPGLAVGTHRGPVARVV
+FDLGDRTRSRWVVPFGASGLGGGHVTDQLDAWAAGRLLPVPSRPVPPSAGSGVAPARSVP
+GGAPPGRIVAEVGVGALGLTMTRVRPALDAPLIHALVTEPRAEFYGMRGHSVQDVEEVYD
+FLEFQPTHANHLVWHGGTLVALVQTYDPRAEEVGGAYEVRDGDLGFHFITAPGGLQGRAR
+ATAYRSIVDWLGARPGTRRLVIEPDVRNTRAVKTARALGFTVDREVELPGKRAALCFRDV
+R
+>4_953
+MSADAWTGTATGDVAGRCHRDAHGVPTLVAASLPELAYLQGWHVATERAWQVDCEHRRVT
+GMSAEVFGPPAVANDVAARQMDLDGAARQAFNALDDAEDRAWFTRFADGVNAGLDAGARR
+APEFAAHGVKPLPFDPHTALALHLGYNVWLTNAPAALFRTLLAERFPALAAALISPRPDA
+DGSNAWAVRVGAEGAPLVAADPHRLLELPGVYQQVRLVVEAERPRDRVDVVGLAFPGVPG
+VPHVGQSEHVAWVTTSAMVSSLEMVLEDAPEGPEVLDARTERVHVRGGDPVDLRVAHTPR
+GRLVDVPGAGPVSMRFPAWDRADTGLPSARRLLTAASAAEACAVLDGHVEPVNRVIVADR
+RTVLTRHAGAVRRRDRRSAWGAARASALGRGSADGSLDQRWVRWPAPAAADDVVVAANEP
+HPDTACLTVDACAPWRSRRIREALEALAPQERTVDAMAALQTDTRTPGAPRAWLADAVDA
+LVADGVLAAESVPAWAGDAAAGSAAARWWLLVEHEVAAALIAHLPPASRALLGGPWAPWG
+DAAAWVGAALAERGPEPLRAALGVAASTRDLVRAAVAAVGDAAEPPGPDDTARTWGAAHA
+LTPFLFTHEHPGGPDVPGLADVLDTIGSVRVGGTADAVCATSHAPGLAVGTHRGPVARVV
+FDLGDRTRSRWVVPFGASSLGGGHVTDQLDAWAAGRLLPVPSGPVPPSAGSGVAPARSVP
+GGAPPGRIVAEVGVGALGLTMTRVRPALDAPLIHALVTEPRAEFYGMRGHSVQDVEEVYD
+FLEFQPTHANHLVWHGGTLVALVQTYDPRAEEVGGAYEVRDGDLGFHFITAPGGLQGRAR
+ATAYRSIVDWLGARPGTRRLVIEPDVRNTRAVKTARALGFTVDREVELPGKRAALCFRAV
+H
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002350.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002350.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bedfe1e3e60acc3c4b610845ebc3c6072df5125b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002350.fa
@@ -0,0 +1,24 @@
+>3_735
+MTPVPPSSPSRLDALTAPTARHAHRLLVAKAIREFTHERLLTPVRGERVDDAGRHAYTLT
+LGGVRWTFTARALPLEHLGVDPDSVCRAGDPDAVAVDRFVLDAAEVLGLAGEALDVYLEE
+LASTFAARCHTLAGERPSAADLVDADYTAVEAAMSEGHPGFVATNGRIGWGATEYAMFAP
+EGGRALHPVWLAFPSELGGRWTWPKTASAGAAVPAPPPPITEAVAGLWAERAAALDVDPE
+AYTLIPVHPWQWEHRIQVAFAPDLAVGRLVHVGEDPDAFTAMQAVRTLFNASDPHAPQLK
+TALSVQNMGFVRGLSPAYMSVTPAINAVVADLVDSDPLLARWGFGVLREYASAGYTGDAF
+HAVGSKGPHTKMLAALWRESPLPRLAEGERVMTMAALLHRDGGGRSVAGALVERSGLTAA
+QWLHGVVTAYVTPLVHLAAAYSTVFMPHGENIVLRLREGRVTGAFLKDIGEEVVVGADGV
+PLTEQTRRIRIDLTDEDLSLSFFTDMLDGVLRHLADVMDADALLPAEEFYAVVGRVLAEY
+TALGLADVERLGLDAEDFAHSCLNRLQLRNATQMVDLTDPSGSLLYAGRLANPVSAPLRR
+ALAELRQDAAA
+>4_954
+MTPVPPSRLDALTAPTARHAHRLLVAKAIREFTHERLLTPVRGERVDDAGRHAYTLTLGG
+VRWTFTARALPLEHLGVDPDSVCRAGDPDAVAVDRFVLDAAEVLGLAGEALDVYLEELAS
+TFAARCHTLAGERPSAADLVDADYTAVEAAMSEGHPGFVATNGRIGWGATEYAMFAPEGG
+RALHPVWLAFPSELGGRWTWPKTASAGAAVPAPPPPITEAVAGLWAERAAALDVDPEAYT
+LIPVHPWQWEHRIQVAFAPDLAAGRLVHVGEDPDAFTAMQAVRTLFNASDPHAPQLKTAL
+SVQNMGFVRGLSPAYMSVTPAINAVVADLVDSDPLLARWGFGVLREYASAGYTGDAFHAV
+GSKGPHTKMLAALWRESPLPRLAEGERVMTMAALLHRDGGGRSVAGALVERSGLTAAQWL
+HGVVTAYVTPLVHLAAAYSTVFMPHGENIVLRLREGRVTGAFLKDIGEEVVVGADGVPLT
+EQTRRIRIDLTDEDLSLSFFTDMLDGVLRHLADVMDADALLPAEEFYAVVGRVLAEYTAL
+GLADVERLGLDAEDFAHSCLNRLQLRNATQMVDLTDPSGSLLYAGRLANPVAAPLRRALA
+ELRQDAAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002353.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002353.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1b3dc3765b309d40e446df156284e27cf53dbdf3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002353.fa
@@ -0,0 +1,20 @@
+>3_738
+MLPRLFGLGDPAAYLDATGRAARVAVDTAYDRAGVHPDTPSTHLADAVGAVDFSQPTGSL
+DDALAEVAELYAHQTTAYHHPRYAAHLNCPVLLSSTAADTVLGALNTAVESWDQARSAAL
+MEQRLLAEVGRWCGFAAGDGVFTSGGSASNLQAMTLARGRAVQRLTGHAGLADLPAEVLG
+SLRVFVSAATHYSIAKAAGLLGLGRHAVVVVPTDAAGRLDPGALAEAVEREVAAGAVPMA
+VVATLGTTDRGAIDPLPAIADVAERHGMWVHADAAVGGILAASAATRHELPGLHRADSVT
+MDFHKTFYVGLACSALVVRDAESLRHVTVHADYLNPEDSVHPNLADRSLQTSRRFDSLKL
+WLTLREHGAEAVVSLFAGARERTRQACGILRARPTFAVLEDPTLVTVLFRVRAEGLSEEE
+CTAVQAATHRELVAGGRALIATTVVDGVPHLKFTILNPAVTSGELEELVDVVEEAALRHV
+DAVRASRHRWRGVARTRPHGPSVAVSCTLPASAGPRPSAARVDEHGEQVCA
+>4_957
+MLPRLFGLGDPAAYLDATGRAARVAVDTAYDRAGVHPDTPSTHLADAVGAVDFSQPTGSL
+DDALAEVAELYAHQTTAYHHPRYAAHLNCPVLLSSTAADTVLGALNTAVESWDQARSAAL
+MEQRLLAEVGRWCGFAAGDGVFTSGGSASNLQAMTLARGRAVQRLTGHAGLADLPAEVLG
+SLRVFVSAATHYSIAKAAGLLGLGRHAVVVVPTDAAGRLDPGALAAAVEREVAAGAVPMA
+VVATLGTTDRGAIDRLPAIADVAERHGMWVHADAAVGGILAASAATRHELPALHRADSVT
+MDFHKTFYVGLACSALVVRDAESLRHVTVHADYLNPEDSVHPNLADRSLQTSRRFDSLKL
+WLTLREHGAEAVASLFAGARERTRQACGILRARPMFAVLEDPTLVTVLFRVRAEGLSEEE
+CTAVQAAMHRELVAGGRALIATTVVDGVPHLKFTILNPAVTSGELEALVDVVEEAALRHA
+DAVRAGRHRRRGAGRNRPHAPSASVSCTLPSSAGPRPSAARVVEHGEQVCA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002355.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002355.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0357957758a2446add6ec5357f24ff9d1f9a129b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002355.fa
@@ -0,0 +1,12 @@
+>3_1600
+MLLAYIDEIGEPGAYVGPDHPRSRTSPAFGYAGFVMPESAARGFGAKFTALKRQLFASEI
+DRAKHPGRWEFKGANLFRPDTPARFPQQLRVFDALVRSVVVDHGGKLFYYADEKQRGTPK
+QIGLDVEKREADAMRETLNRLARHAHHHGHNLMVIIDQINEKTRVERVASMYAHIFSRAG
+DFPEMRCIVEPPMHVDSSLSSNVQFADWVAAAVTRAVDHQLNDSSKYAWVTDPQRLASMR
+GSFTYESKLHLWNRGVQDINHSELFHRERRLAPTPHGQLLGASVDPAAAEKMAKIWRSGR
+>4_1822
+MPESAARGFGAKFTALKRQLFASEIDRAKHPGRWEFKGANLFRPDTPARFPQQLRVFDAL
+VRSVVVDHGGKLFYYADEKQRGTPKQIGLDVEKREADAMRETLNRLARHAHHHGHNLMVI
+IDQINEKTRVERVASMYAHIFSRAGDFPEMRCIVEPPMHVDSSLSSNVQFADWVAAAVTR
+AVDHQLNDSSKYAWVTDPQRLASMRGSFTYESKLHLWNRGVQDINHSELFHRERRLAPTP
+HGQLLGASVDPAAAEKMAKIWRSGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002356.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002356.fa
new file mode 100644
index 0000000000000000000000000000000000000000..83ef65daeb0e7bb11f15c70a652a83d7d2fe9699
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002356.fa
@@ -0,0 +1,10 @@
+>3_1655
+MARKSNPVYYDANGNVVQPPAKKKGGCLKYALIGLLALIVIAVLASMMGGGSNSTSEGGG
+EAASQGETSSSDEAAKVGLGQEFTVGDWATTVESVDTPVASVGPSGFSTEAQGEFVPVQI
+SAKNNAKEERTFFADSVKLVSADGAEYSYSTDASIYGTENGMNIEPTNPGNVASGYLWFD
+VPAGTEITQVKVSGGGLSLDQPVVVELD
+>4_1873
+MARKSNPVYYDANGNVVQPPAKKKGGCLKYALIGLLALIVIAVLASMMGGGSNSTSEGGG
+EAASQGETSSSDEAAKVGLGQEFTVGDWATTVESVDTPVASVGPSGFSTEAQGEFVPVQI
+SAKNNAKEERTFFADSVKLVSADGAEYSYSTDASIYGTENGMNIEPTNPGNVASGYLWFD
+VPAGTEITQVKVSGGGLSLDQPVVVELD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002359.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002359.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1d1509d0d2380dd04b0caf7603e6499f96c1c2e2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002359.fa
@@ -0,0 +1,10 @@
+>3_1699
+MIGALRYVLSGGAPLAVETLREAEAEAAFGVPVREAYGLSESCGPVCFNPMDGPSRPGTV
+GRPLEGVEFRIVTPEGVEVPERDTETPGELRIHRPVVMSGYLGLPEAGAAAFDDDGWLRT
+GDLARRDEEGYYRIVGRLKDINIRNGYNVYPREVEDALYVHPDVAEAEFSAFVRERLLSY
+KGPQPVTLMDSLPKNGTGKIVKDLLR
+>4_1917
+MIGALRYVLSGGAPLAVETLREAEAEAAFGVPVREAYGLSESCGPVCFNPMDGPSRPGTV
+GRPLEGVEFRIVTPEGVEVPERDTETPGELRIHRPVVMSGYLGLPEAGAAAFDDDGWLRT
+GDLARRDEEGYYRIVGRLKDINIRNGYNVYPREVEDALYVHPDVAEAEFSAFVRERLLSY
+KGPQPVTLMDSLPKNGTGKIVKDLLR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002362.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002362.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ef7422e46a9bbcf30235a9534486206187b3e50c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002362.fa
@@ -0,0 +1,10 @@
+>3_1935
+MSESTSAAPQPSQSVPSRRRVASSLAWAVPTVVAAAAAPAEAASPLPRIDRVFQLTLAPG
+VPWTEPKVSPCASTLFTNPTRLSVTTDNSAFYYRITNLRADSTVTDVTASVLVQKSVVDK
+LSNGLTWTSETKDWSNPTLDVSGAKYIDNGIEYYRYYSTLRTAVPAPVSGTITLPRIQWY
+SNCSTNLLTQAQSTGVMANGRGSAVVNGTPLVNVGTYVRLTPRPAG
+>4_2173
+MSESTSAAPQPSQSVPSRRRVASSLAWAVPTVVAAAAAPAEAASPLPRIDRVFSIRRATT
+AAVPGASVSACGSGSTRLSVTTDDVNTYYRIANVRTGSTVTDVTASVLVQKDMVDAMETG
+KNPTTFTWTSSATPSWSTPVREVSGTGSPVLYTNNGIQYYRYVSKLSTPVPAPVSGTITL
+PIIGWYSNCSTTLAGVSVNGRGSAVVNGTPLVNVGTYRQL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002363.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002363.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a358460d8ccba182f300169676532ca20c20f625
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002363.fa
@@ -0,0 +1,4 @@
+>3_1972
+MRVTSPQTLISAVFEAAERATNDLTHLIPDLDRDRAEYAVASVLLEEAWLSNR
+>4_1100
+MRATNQQALITAVFEAAERATDSITHLVPDLDRDRAEYALVSVLLEEAWVAQR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002364.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002364.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b4420b6be0a25538bffa92b43b9778283722299e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002364.fa
@@ -0,0 +1,6 @@
+>3_2242
+MITAVSSAWVGAMSTEGPGASSSAKSRVPAGRSPAPVETTYTVGPPSDPPAWAAPLTAAS
+AAVSTVMSTAVSESDR
+>4_275
+MITAVSSAWVGAMSTEGPGASSSAKSRVPAGRSPAPVETTYTVGPPSDPPAWAAPLTAAS
+AAVSTVMSTAVSESDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002368.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002368.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3d50de751945818e8d7f2626c5ae6bebffb3413f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002368.fa
@@ -0,0 +1,16 @@
+>3_2247
+MVQEAGVPEESGDAERRLREAWSALLEDADRIADEIAAATLGGDQGGAWSTPELRARLRR
+STREHVRRGLRGLAGVPSGEGAGGRLVDTWRATGVERARQGVPLETVISTYTSGNRLLWE
+ELGRRVREGRLDITTEELLEAGRRLWEDLSVTGEVLSAAYRRETARLTLRDLRRQEDCLA
+GLLEGKGADPVYAEQAEEILGVRATAPLACVVALAEDPGSDVLHHPEDRMGRLGATSRWA
+VREGALYGVVEPPSTDEEWLTEALGPLVEGQVGVAWARQGIPETAAAFRLATRAAHTLPP
+GERRLAWASHRLPEVLLESSPEVAALLVEEVLGPLRALPADQRATLMETLRALLRRSGSA
+TLAAEDLICHRNTVIYRTKRLVELTGCSLQDPRGRLMLELAVLAADRAGGPVRRARPISP
+>4_280
+MVQEAGVPEESGDAERRLREAWSALLEDADRIADEIAAATLGGDQGGAWSTPELRARLRR
+STREHVRRGLRGLAGVPSGEGAGGRLVDTWRATGVERARQGVPLETVISTYTSGNRLLWE
+ELGRRVREGRLDITTEELLEAGRRLWEDLSVTGEVLSAAYRRETARLTLRDLRRQEDCLA
+GLLEGKGADPVYAEQAEEILGVRATAPLACVVALAEDPGSDVLHHPEDRMGRLGATSRWA
+VREGALYGVVEPPSTDEEWLTEALGPLVEGQVGVAWARQGIPETAAAFRLATRAAHTLPP
+GERRLAWASHRLPEVLLESSPEVAALLVEEVLGPLRALPADQRATLMETLRALLRRSGSA
+TLAAEDLICHRNTVIYRTKRLVELTGCSLQDPRGRLMLELAVLAADRAGGPVRRARPISP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002372.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002372.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8a4d4daf50bff9071560e46b3dea4e5eb61c39a5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002372.fa
@@ -0,0 +1,2 @@
+>0_32
+MSTTTATPLTVPELIAAIRSISDEIRAIQAGLAADNAQERHP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002376.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002376.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4b1b00b3a2f7ffed5a0e5ce904d3f70b839cd238
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002376.fa
@@ -0,0 +1,3 @@
+>0_39
+MTVMTPIGDSVREVRATSAGDLPLHAYELRNRDFLVVQLPTGAVLAVPSDSVPPIERDLW
+EDAELRRSLWRGFDDAVCGRVTPLEDVLAELDFDLSSED
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002380.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002380.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b95bff5561b08b65273760a50737ff0d33afeb42
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002380.fa
@@ -0,0 +1,3 @@
+>0_68
+MERKDDRRAFLTWTLISAVGLALVIASFTWPAWLVVPGALLALVGVSQSHEYRGYSHWFG
+LLVAAVAIGGGPFHLLSLAGDLGSFLGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002391.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002391.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2f1dd07b7d6ce31584a49c9282ef64a24c463af0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002391.fa
@@ -0,0 +1,6 @@
+>0_154
+MPGPQGTDRRAIPQRSTRWAARLADLMHAAGLTPNRVSVGSVLFAAVGAAALVAAGHAAT
+GDGARAGWFVLAAACIPLRLNMLDGMLAVEKGLHSPTGDLFNEVPDRVADMLLLAGAGYA
+AAGAWLVPGWGAGLDVGVLLGWTAAAAAVLTAYVRSLGAANGVGNFFEGVLPKPHRMWVL
+AAACLLSLLEPLLPVPRGTVLALALAVIAAGSVLTVARRLRLIAAALRERADAAPARPAG
+ERTAGLPTDGGERA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002392.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002392.fa
new file mode 100644
index 0000000000000000000000000000000000000000..67174fbd0a8ba94a91641345a8d7e77b8e80a688
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002392.fa
@@ -0,0 +1,5 @@
+>0_155
+MPRRQPAADRSALLDHALAAAAGFAEATFFVVVPDVWTSRVAFERPRRGLATAASALAGA
+LAGGAVTHAVSRRAGAARTRSWLTALPGISDGMVDTVEARVGAGGHLALITGPSRGIPYK
+VFARCYGVDAARPGRGLGALLLASVPARLPRFLLVTGGVGLLGARLRRRAPGLGRRGRGV
+LFWTGWGAFYAWYLPAVTRAYRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002393.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002393.fa
new file mode 100644
index 0000000000000000000000000000000000000000..43df44459d0051659671529d6678142f82d22b0b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002393.fa
@@ -0,0 +1,6 @@
+>0_166
+MRKALPTAVTAAIGLALVAPLAAAAQEGDTAALSVLHGVPDLTVDVYVDGELTLDDFTPG
+SLAGPLELPAGDYEVAITAGDAEDDSAPVLGPVDLTLAGGGDYTAAAHLDAQGNPTVTAF
+ETDTTPVAAGEGRLTVRHIAAAPAVDVWADGAVAVPGLANPDEAALELPAATLEAAVSVA
+GTTDPVIGPADVEVAEGVNTVVYAWGSATDETLALATQTVEGLQSAPENVNAGMAPAAQD
+DTALYAGAGVAALALLAGGAMAVRRKAAVRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002395.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002395.fa
new file mode 100644
index 0000000000000000000000000000000000000000..026fef42a816e47c8c98568482b175d9aad4573d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002395.fa
@@ -0,0 +1,3 @@
+>0_168
+MSTDLSELAHRFAAGHADAMADVYAEHARMVFSLCMVGLRHREDAEDAAQQVFTRAWRSR
+DTYDPRRPLGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002396.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002396.fa
new file mode 100644
index 0000000000000000000000000000000000000000..91719da43d6002a4442dd328c48cc9d0608e4416
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002396.fa
@@ -0,0 +1,3 @@
+>0_169
+MDRIVVHDALDRLGPPQDEILRLAFHKDLPQKEIAERLQMPLGTVKSHIHRGLAALRATM
+TRTEEVHDA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002400.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002400.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d0c80dfd781b72536e3cd5466640fdc5c8052423
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002400.fa
@@ -0,0 +1,3 @@
+>0_227
+MVAGLPWFAWIAIVAILVWGTLQVVQLVTGRALPGEEMKKEVEELRTRLDANEGRRPAGE
+LPARADAEGSDLERRIERLEARADRREARDREHDDWDRRAGELG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002401.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002401.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8f6412e35cc82ed294f96b65479b17d719e57f9b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002401.fa
@@ -0,0 +1,9 @@
+>0_259
+MPRPARLVAPPYERYADAIAALPAADRSRSLGVLDLDAFRANAAAMAARAAGVPVRVASK
+SLRIRRAVVEALEQPGFRGVMAYALAEALWWAESGQPDVLVAYPTADEAALDALLRSPRA
+RAAVVLTVDSAEHLRWIEDRVRAAGVHPGQGAADLPPLRLCLDVDTAWRPLARLRVGALR
+SPVRTPDQARELADRILRMPGVRLSGVLAYEAQVAGLPDASGPRAAAVRVVKSGSRRDLA
+RRRPAIVAAVRQAVRAAGAELDFVNGGGTGSLAETAAEGVVTELGAGSGLLAPASFDGFH
+GLGLRPAASYVRPVVRRPAPDVVTVAGGGWIASGAPGADRWPTVAWPEGLRLTRQEGAGE
+VQTPLHGPGAARLALGDPVFFRHAKGGEPAEHLDAVAVYSAQADAIVDLWPTYRGEGRMF
+T
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002411.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002411.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cd7d4e47a1bb165d94da84642f6e84315cd5a6b2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002411.fa
@@ -0,0 +1,3 @@
+>0_349
+MTSATSSSPASPAPAAACLVLTLAATAALPDWSGSGVARPLWALLLPAALGLAGAGLALR
+ARRPGGGGGGAAGGLGAGPALIVVTTIVSGP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002414.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002414.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6058aa6532402a5db37877f7b2a6154c30ad082b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002414.fa
@@ -0,0 +1,4 @@
+>0_374
+MPRTTLTFGGLLIAVGIISYAVTGFISWTALIPAFLGLLIAICGLIALKNTTIGLSIALV
+ISVLGVLGTSMNVLKVGELISGQAERPLAIVASTVTFVLLIVYIVTGVRLFLTARRGDKA
+EATTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002415.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002415.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6f932b65e7ed7dd2a7c08548334b9b6e45c13804
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002415.fa
@@ -0,0 +1,3 @@
+>0_393
+MLETPTALIVDYIDEHKHEFGVEPICATLSAAGTQIAPSTYYAAKTRPPSVRSLRDEQVL
+GLP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002416.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002416.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2c511dbd25633d4dca1ab8c1e9d4b2ef176b454c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002416.fa
@@ -0,0 +1,6 @@
+>0_413
+MSLRIHPHHCRRIVHRPILALSRDWLRRGGQGPGAGPGEWRTVSTSAALAAPRTPGSVGG
+ESRGRGSGRGGIGQRGCPARARPTGCRTDGWHAAYARPPRPLQARGRGVAQTARPPTGGV
+DGPTAPLMITGPCMLSAVIRQRRRGPSVVSVTTMSARSLASSGVGSQRRVAFHVKHSYGH
+ASRRIACSSAWMSTAGRVTVLGGVHNGPHTQRPHARPQPPHPRTEPAGGIAPTDGLRRRA
+RAQWPPQAACAGPQPFAAGAPRPAISAAASR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002419.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002419.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5dd6d8def81d5e0a4734bb8cbb92dd771a559296
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002419.fa
@@ -0,0 +1,3 @@
+>0_439
+MDAMLTGAEVQATASADQLASGLLRNDESTKFLDGVVPMLLNFRLPPEAIASLVIGQTFV
+GNTHYGRQTIYCDGGHEVVLRERTRRAGPMSAKASTSRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002421.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002421.fa
new file mode 100644
index 0000000000000000000000000000000000000000..565f6d8607da26abb6e9929898379340533ba3d2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002421.fa
@@ -0,0 +1,5 @@
+>0_448
+MTLSPFTVVAGTFYRAVDARFVDSALRGSRSAGRYSPPDAPTLYLSSSPEGVDAAMVAHT
+DATTPPRELLTFDVHAERIVDLRDSEALAALGVDLADAMAPWKPAVEVGEEPSSWAVRRR
+LEEAGAHGLIDPSRTAPGLWHLTLFRWNEGGAPRVTRAPGGVTAGSGASPRRTRWTGRGG
+S
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002430.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002430.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4d460807bd22b52840f71e68b93df1e6c6544491
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002430.fa
@@ -0,0 +1,7 @@
+>0_467
+MTRVHVLATGGTIASRSGEGSGATAGDSAEVLLEGMDATADVEVTSEDVMTVGSYRLGLP
+ELATIARVSRERAEEPGIDGVVVTHGTDTMEETAFLTDLLNGTDTPVVFTGAQRAADHPD
+SDGPRNLRQAVLAAAHPNARGLGALVAFDGVLLSARGTRKGHTMVSQPFTGGTLVGATHG
+DEFRLHARPHRPGTLDLPDSGLDGVRVDLITAYPGADPAVLPAAVDRGAHGIVLAGTGLG
+NAGPGHAEAVADLVARGVPVVLATRTLAGPVLGVYGHGGGADILAAGAVAAGELTPFQAR
+ILAAALLAHRPDPHEFAARFTRLR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002431.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002431.fa
new file mode 100644
index 0000000000000000000000000000000000000000..411f66a8eb18180074917850fb79ae59586c4287
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002431.fa
@@ -0,0 +1,6 @@
+>0_468
+MAKKIYVSVGIDVDAVGGWLGSYGGEDSPGDISRGLFAGEVGVPRLLQLFQRRELPVSWF
+WPGHSIETFPEQFDAVVAAGHEIGVHGYSHENPIAMTRQQETEILDYCTDLIERRSGTKP
+VGYVAPWWEFSTVTNEILLERGFLYDHSLMHDDHTPYYVRVGDSWTKIDYEAASAHEWMK
+PLVRGEETDLIEIPASWYLDDLPPMMFIKSSPNSHGFVSPRDIEQLWKDQFDWVHREMDY
+AVFPITIHPDVSGRPQNLLMLERLFDHIQGHDGVEFGFMKDVAADFARRFPRERG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002432.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002432.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5d6fe319196c565494db77e38116974ca19740b7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002432.fa
@@ -0,0 +1,3 @@
+>0_469
+MCGACGRGVASPTTALLNEHGLKRRALARLRGELAPGCRLTLEGDAWTLIRRSGRGEHHA
+DVEGLIASLEGGAAGDWVGAEPPREVVAAVTAGMVARARRRSD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002435.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002435.fa
new file mode 100644
index 0000000000000000000000000000000000000000..69c43031141f528629596509430acd1fe6f9329f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002435.fa
@@ -0,0 +1,4 @@
+>0_476
+MELAPAAPWVRDLGLGPVDAAMTMHDVGDEGSEAPRRVRARLLRVREARFDRRSAAGGQG
+RKLIPGSVRRPDVDGLPGRNEPEAEEAEPPAADTGTPLIGTVSYEASFNPPPGWVSGPDG
+WLLDLEVLEELGPAW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002436.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002436.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f95a661206438df73b283dac073f7dc0d61f0ff8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002436.fa
@@ -0,0 +1,2 @@
+>0_477
+MPFDQVTAEHAAAEGDRTLASWRAEHERFWRAHAASGFAPDMPVVCEAFRVVHRRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002437.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002437.fa
new file mode 100644
index 0000000000000000000000000000000000000000..15b982f4117b5f14e29ad9d7e6c0670260d83518
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002437.fa
@@ -0,0 +1,2 @@
+>0_480
+MKFVILIHSHPQPWAHPTSEHTAEYQALPPATQERAEEIAAAFSCPGDTVELRPVWEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002439.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002439.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f71abe629d75423b7af535262b1b3414043195a9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002439.fa
@@ -0,0 +1,4 @@
+>0_485
+MADLMGLLYRSDDHGTVELRRILPVAPADLWPELTDPERLAAWFAPVTGDLREGGDYRIA
+FEEDDDEPGSASWGRIEQCERGRGLRLTWQSAEDEPAPSTVQVSLRAVDGGTRLVLVHSG
+LTHGEDVGHAAGWEVYLRDLAAHIEGTPAEEGDWFERWERHRAAYEATL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002440.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002440.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0fdb643a7cf0aad674afab11b12dc904dbb3f986
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002440.fa
@@ -0,0 +1,6 @@
+>0_486
+MGVYVAGGGLGIVVSGLALPWALNSFPDDVGWRVGWGLLGAVGLVAWAVAARAARRVPAP
+APRAAGSRAPVRGMVPLLVGYTLFGMGYIAYMTFIVALLRGDGATDQQVAVFWVVLGLAA
+VAGGFAWAPVVERLQGGRAPALLMVVVALGAGLPLLWAGPVPALASAVLFGGTFLALVGS
+VTHSAQRVLPAAQVADGIGLLTTVFALGQSVGPVLSGVLADSADGVRAGIALSVAIVVLG
+AVAFLPQRRVLPEAATTAGGAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002441.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002441.fa
new file mode 100644
index 0000000000000000000000000000000000000000..38367e332d74c8b8abe43f18a9654f28b9e310e6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002441.fa
@@ -0,0 +1,5 @@
+>0_493
+MPAATLDDLRRARRVLFHGVTGAGKSTAAVRLGAVLDLPVTLVDEELGWLPGWVIRTPEA
+QVALAEPILAGERWVLDSAYRFYREAAVARADVVVGLDYSRAATFARLLRRTVRRAATAE
+PVCNGNTETWGRALGPESILRWHAQTFEAKRAWIRAREADDAGTPVLRLTHPRQWERTLA
+ALAAGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002443.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002443.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a6d86bed1c1da6ae6c6fe93bdb950c273fe80455
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002443.fa
@@ -0,0 +1,4 @@
+>0_502
+MTASAPDPATTASPLTVLPVLRDAPAADPDGERGVVRRHHTGDGASLITFTFAPGQGWPE
+HQAAHPITVQCLAGRLDFTVGDRTERLVPGVVAHLPARVRHDVAAPADSPDAANVLLLTM
+LT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002444.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002444.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cd245bf2d612756e8813f76d9c20500e7c9aa5e8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002444.fa
@@ -0,0 +1,5 @@
+>0_504
+MSENAPDPRRRLSTAEIDAAGLTDWRLLAGRLQARFAPADYAAGLDLVARIGAAAEDADH
+HPETTLTYGHVVLTLSSHDVGGVTSRDVRMARRISALAAELGAGADVAGLTRAEFGLDTD
+RGDEHARYYAALLGAEVTAGGEVTDPALQAPTLWWQGSAGEGSASETPLPAPEVEQRWHL
+DVWVAPEEAPARLRAVLDAGGRLVSDAAAPSFWVVEDVEGNRSCICTSQDRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002445.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002445.fa
new file mode 100644
index 0000000000000000000000000000000000000000..02fa643cd648be5a867716a024157053a8f4c0bf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002445.fa
@@ -0,0 +1,2 @@
+>0_506
+MDTQETQDLPAFTFLAADPADGDAEGAVEDTDAAFCRLDGSC
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002446.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002446.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8f0bdd6b791553bbea33cae0131819f08c33cb5c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002446.fa
@@ -0,0 +1,4 @@
+>0_518
+MDTADLPDLPAPEDRTATASRRVEAPAGVVFELIADPSRQPEWDGNDNLAQSEAGQRVTA
+VGDVFVTTLRKGVDRANHVVEYEEGRRIAWKPAEVGGEPFGQLWRWQVEGDDDGGCRVAH
+TYEWAQLTDPQRIRRALRTGPEQLRASIDRLAALAEAEAREA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002449.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002449.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7e79f9ea272ed50774bd02d5c67c911843eae52f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002449.fa
@@ -0,0 +1,8 @@
+>0_569
+MSTASTHPTTAGRRPGGAAVAPGTAGPGRPEPRRTEPRRTPFWTAVGTVAAREMKVKGTS
+KPFIITTLLLVAAALAATLLVPRLGDLFAGDGTSVGVVEQTAPAVAALGEDYDARTLGSA
+EEARAAVERGDVEAAVLPSADAPGGLEVLAMTDVPTSLVQALSVSPAVELLDPSAPNPML
+RYFIAFGFGLVFFMAALTFGQQIAVSVIEEKQSRIVEILLAAVPARAMMAGKVLGNAAMA
+ILQVALIAGALLLGLQINGDVLPLDGLGVPILWFVLLFSIGFVMIAALYAAAASMVSRQE
+DIGSTSMPVMMMIMLPYFGVIFFNDNPDALRIMSFIPFSAPVAVPLRIYLQQGQMWEHVL
+ALGILVVSTALAIWLAAAIYERSILRTGKALTWRQALQRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002450.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002450.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8d01de6944586d54240d6582114a7b304c59802c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002450.fa
@@ -0,0 +1,3 @@
+>0_579
+MTGTTLDRPTPTSVSTSVEPRTGAHAVARTLADTAADAAPAVRTPVPPLPPTRPRPPSRP
+GATASASRSSSPW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002454.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002454.fa
new file mode 100644
index 0000000000000000000000000000000000000000..90f510a40f8e95aec235205fbd4cbf59fef7d0d3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002454.fa
@@ -0,0 +1,5 @@
+>0_589
+MLDHPNAAPSPEDAPAASARPAGDAGVTRLPRLALRVWQATTCATALPIAAVLAAVALWW
+DHPVGGPVLWILVALTAAVALADLAVVNRVRHRSYSYTVDEDEVYIAKGALVRHTVDVAV
+PQVLSVHVVRGPLQRALGLATVRFVSVVDAESLGPVELAEAQRVKEVVLRGLAARRQESA
+TALVAAGEVAP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002457.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002457.fa
new file mode 100644
index 0000000000000000000000000000000000000000..dbdec68eb84ce1892db1fa903d30717ea018136c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002457.fa
@@ -0,0 +1,3 @@
+>0_605
+MPKKFSPELRERAVRMVLERQATQGGPRSHSIRAVAPQLDVSEETLRMWCQRHGHEIAQA
+PVSETPAEEIRRLKRELAEARRANEILKAASAFFAAELDRPTTR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002458.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002458.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c7239269b7bf076729f04db245dc7f84855346f4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002458.fa
@@ -0,0 +1,2 @@
+>0_606
+MIAFIDEHLDQFGVEAICRTLRATECGFITST
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002459.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002459.fa
new file mode 100644
index 0000000000000000000000000000000000000000..13b06293b48a15853bb3f3981189e58846c59ae5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002459.fa
@@ -0,0 +1,3 @@
+>0_607
+MGTVGDSYDNALAESVNGLYKAELIHAKRIWESVEAVELATMGWVHWWNTTRLHEALDYL
+TPAEVEAAYTHDQDSAPVAS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002461.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002461.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a790e028520cc5a8ccbd9a763cdae104b6f52e3b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002461.fa
@@ -0,0 +1,2 @@
+>0_613
+MGAAHVWDASTVAALDSVLTKYAQHGIHAEVTGLNEASTAMHARLTGRLGT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002464.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002464.fa
new file mode 100644
index 0000000000000000000000000000000000000000..56872974524de467cf06a1a7a8fbd4b822256781
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002464.fa
@@ -0,0 +1,2 @@
+>0_689
+MPAPYPREFRDDVVRVAQNREPGTRLRRIAQDFGI
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002465.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002465.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f28a0feb3bb42984c4623eccf8e0850b1c43e2d6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002465.fa
@@ -0,0 +1,6 @@
+>0_690
+MVSRSSHPDTETAPGRVRIRTDDGVVLLRCARGAQGEPPRLGLEDSGSTFGLALHAERCA
+APVPGVRVEVTRSGLFAERSPAGTVLLPDDGGEPLWLSAPERSAAGQILLGVVEALRAEV
+LPGHVSVPPVPAPRARVERIARWDEVLAPNGLAGGLAPGERPSQAQQALGGAWRLVLDAA
+PDLPVEARLWLAHREQVAGEKVVRLTATWHGPGADVPWHVELHVSHRLGEGQTEFLVIDG
+STQEEWTIADAVHVPGVPLTWRVHPAPRPDTAGRTGEGLYALIDALAHACPA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002468.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002468.fa
new file mode 100644
index 0000000000000000000000000000000000000000..63f00e698388b2753ce320fbda2d15dc41f13886
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002468.fa
@@ -0,0 +1,4 @@
+>0_699
+MVADSEAAMPGHAMKIGEVAGRTGLSLRSIRHYDDVGLVPPSARSEGGFRLYTEDDVTRL
+LRVMRITPLGFSLEETALLLEVLEGPAAEAPREDIAAYLERARKGRATLARKLRQADELL
+AELEALGD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002473.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002473.fa
new file mode 100644
index 0000000000000000000000000000000000000000..52b29f48e799149cff768ec95361ee1e7b4d0d14
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002473.fa
@@ -0,0 +1,4 @@
+>0_730
+MGITPKNMWPAVKAMLHSVYDQPDAQAVDAQFDRLLDYVSEKLPAVAEHLDAARADILAF
+TTFPKDVWTQVWSNNPAERLNREIRRRTDAVGIFPNRAAIVRLVGAVLAEQTDEWAEGRR
+YLGLEVLHRCRLTPVSNTGDEVDTDTALELSA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002474.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002474.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cbe88857e77348e16fd5c23feda903868f75661a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002474.fa
@@ -0,0 +1,3 @@
+>0_733
+MPKKYTPELRERAVRMVLERQAAEGGPRSHSIRAIAPQVGVGEETLRMWCNRHGHEVAPV
+PAGESPAEEIRRLKRELAEARRANEILKAASAFFARELDRPTTR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002477.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002477.fa
new file mode 100644
index 0000000000000000000000000000000000000000..32cb60fe12336cc81aa8e5bf1103de8590931680
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002477.fa
@@ -0,0 +1,7 @@
+>0_749
+MVPSLGILTESIHFAVLNPEEPYVDQNTLIMLARSLPLEGRIVMLTVDVADPGADEAAMR
+ADAEATARAMVLEYRTGMPEDPPSTGPDGFPLLDPPWLMMTVMLPPADDDGALAPVVHLA
+TGTGVTPAPDLVSRLEADLRDARPGTEHTGALEALVRTAVEHSTPSEQVRAAAAEDSLFA
+DRPAWQWALVGALLLALAAVVATALRRRRRRADPARDAHAADPARFAHAGEDPALRLRAL
+TELLALAADAPGARALPQARDATAAVVEHTLALDALAPGSRQGRPDAFRRSVRPELEDRV
+GRAGATLRVLVAAGRDARPAVRFPDAVLEAAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002482.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002482.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a9fa753361969d19391d35bd280e2476dc8ccabd
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002482.fa
@@ -0,0 +1,4 @@
+>0_783
+MGLAAAPRPSRRIDDGGRQVLDLGGLSAVVEHYGRAHTRTDLTVLVPEAGVLDAVLQRLE
+APAARSSRNEPCGMAPTTGEVGAIPQGSFHGEVRVVPGHGAVVDATLVRAQREALAAAPP
+G
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002484.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002484.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3006f5d608d56bbafb2571c682fde49b3bb8cab1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002484.fa
@@ -0,0 +1,9 @@
+>0_796
+MLVAAPIAALVAVVFAGGPLLASYTQVFMPALGKFIVGFFPLFLAGAVFGKLMASTGYAM
+AIARWITGLIGARRAILATVLTGTVLTYGGISVFVVAFGLFPIAYELFRQADIPRRLIPA
+AIAMGAFTYAMSALPGSPQVQNTIPTRYFGTDAFAAPLLGVFAAVVMFAVGMAWLSFRAR
+QAARRGEGFETTWTGGGMAGELRGEEDHLTEDTAHLEQESARAARTRHGRPDPPVALAAV
+PLLIVILVNLALSRWILPTLDFGYLAEEQWGATTLTSVIGLWSVFVALVTAVAFVLLVNL
+RRVRVLVEDLHQGAKDAVLPVFSTASEVGFGAVIASLPAYALVRDALLGVSSNPLVTASL
+ATTSLAGITASASGGLSIALETLGADMLASAQAAGISPEALHRVASIASGGLDTLPHSGA
+VITLLLITGMSHRESYKDVAMVTVVGPLLATALVVVAAAAL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002485.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002485.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8ba1dc8cc51e2fbb6e676a714965365d49e23680
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002485.fa
@@ -0,0 +1,6 @@
+>0_797
+MNAALGFIGLGTMGLPMALNLAKGGFDVVGYDAFEGARTAAAEGGIALASSPRDLAERGV
+TAVISMVRDEAQNREVLLGADGVMAARPQGLTVVVMSTLDPDAMNRLAADVEDAGEATVI
+AAAVSGGQSGALEGTLSIMASGPQAAVDAAGPWFAAMGQETFYYGAEPGNSQVAKLANNL
+MLGVVMNGVAEALRFAAAYGLPQDELLRLAQASTGDSWVVRHWDAVRDWTRETALEVLRK
+DLKAAHLQGLEREIPMPFNALASTELIRAWDTLPAAADEETCR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002486.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002486.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d0117a83add587b1eade8590ce6527799ab480f3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002486.fa
@@ -0,0 +1,4 @@
+>0_798
+MTTHDLTASNPEQTERERFDRGMARMMELVGDGAGTFDHAKLVESYRDVDPELSDYIVSF
+AFGDIYSRTSLSKQQQTLVTISTLVGRGAEPQLKLHINVGFTVGLTREEIVGALIHCIPY
+VGFPHVLNALSLLKEVEAERAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002490.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002490.fa
new file mode 100644
index 0000000000000000000000000000000000000000..45c838503f2980f4937ef24913a9f10103c6b54a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002490.fa
@@ -0,0 +1,7 @@
+>0_803
+MFRRTVGDHAEWKELISRSFVPLESEPLRPSRSFSGRLDVSEFGGIGLTTLAAGPHAVHR
+TERLAAAGGGGMFKVSLQLSGRGLLLQDGREVLLEPGRLAIYDTSQPYTLSFDRDFTSHV
+LMFPHTALGIAPGQAAQVTATALDEGHRLGPAVSAFLTQAADAMPVLDPATGGRLAHNVV
+DLVGTLVADLLGLPPRPAEGARPAPAEGTDDARGRQRAAVLRHIDEHLADPALSPASIAA
+AHFMSVRSLHLLFEGTGETVAATIRRRRLERCRDELGDPGNAGRPVAVVGARWGFADPAH
+FSRAFRARFGVTPGGYRRQAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002491.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002491.fa
new file mode 100644
index 0000000000000000000000000000000000000000..17e2d283f0a828ac5719204089801b985123dc49
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002491.fa
@@ -0,0 +1,4 @@
+>0_809
+MGGVRDVAPALTYGEVGATLGELPPGYRHLDERRTVGHGRADFDRLAAQLLAWRLQRAAG
+FAVHPSTPTLDVGTQVRLAPGPGLVPGGGLLGRLVGGWQCRVVAVVAEPDRAGFAYGTLP
+GHPESGEELFLLTLEPRTGEVVLRIRAFSRPGTWWSRALDPLARAAQRRITRRYLRALE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002498.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002498.fa
new file mode 100644
index 0000000000000000000000000000000000000000..201bf469ddfe371731dab0322db2c7d177542234
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002498.fa
@@ -0,0 +1,6 @@
+>0_944
+MGGVHVRAGREGRGGEHLAGGLAQGEQHVRGGVLVRGAGRRQHGVHEPLDAAAGGGALGR
+ALPRVRLHEGRVQQGLDRHGGALAGVGHAGGEPAAGGVEVADRPARLAQRARDAHRGGPG
+LRRRGGLRRGVGAADGGRGGQRTAVGADGRAQGLEVGGGGRRGGGGGGPADQEGALRLAE
+GEVAVDRRVVGAGGGLAGGRVGRGLAHGASFRDGGCGARPTAAGRGLDSTSGPRRDTVGA
+GVRRPRRGGLSGPAGGAGVWWCPRRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002499.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002499.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3f42ba35ed99afe1ce1b7db45692ac2c61688cd8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002499.fa
@@ -0,0 +1,5 @@
+>0_964
+MASQDWMDKDFYATLGVSKDASEADVKKAYRKLARTHHPDQNPGDEAAEKKFKEISEAYA
+VLSDPQERQEYDAIRAMGGGARFSAPGGAGGGGFEDVFGGMFGGGGGPRTTQSGPDLSDL
+FGGMFGGAARQTGGFGPGGFGDAGYARRAPRRARTAPPPPRSPSAARSRAPRCPCALRTA
+RRSR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002505.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002505.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9ead22528e58e9b89ce4bd4cb58928ca4fda1b63
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002505.fa
@@ -0,0 +1,10 @@
+>0_1036
+MRFAREAWHAAISWPSILLAVVLTALTLHGVSEAASDPGVNGWDVAVVQVSNLQLVPLVI
+AVVWAPVFLARHRALQREDELLRRGSWRKAVAAVVISDAAIIIGALTLSTAAVLAVSASL
+GLDGGWSDRVVGIVSSGGLDSEVSAAAAAAWVGQWHGAPWLFLAIQTAWTAAGLLAWAAL
+HAALMIGIGPRTAAAVVISGALWGVLSGAGLLVGRPFPDMSAWTNSLWAVSNPPSVAVTV
+ALWTLAGVGVVGAAAARDGVREDGRLRLTFPHLAVSLALSVVLLYSWYGAGTEGGTGLAD
+VAFGGQYSSLLGHLLGALPAVVMAGLLAVQLSDLEGGGAEQILLRHGAPHRWVGGLLGRF
+LVGSVAMTGLLVGTFAAADFLWHSEGTTRSAGEWTLLAAAYVSFCCLLGVIALVLFWVRG
+HVQEWIFVVLAILVLGYPTLFPPSPANPLVPYSLEPGTPFTATPLVASLSLLALFVLGLG
+VLLSRLPAPRSS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002506.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002506.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fcb3056ff6a413f0708947b8d4fdff7945c03293
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002506.fa
@@ -0,0 +1,4 @@
+>0_1054
+MLLVAEAEGRPLGVAAWAAPGQAVAQRRRSLLAAPALLRAAWPHRAALRVLGERGPRVDQ
+ALEARHAAEPHWYLGLLTVAPDAQVGGVGSALVRAGLARADADGLPACLECDRHLEAYYA
+RFGFARTHTVEIDDGAPAHLGMGRPAGG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002509.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002509.fa
new file mode 100644
index 0000000000000000000000000000000000000000..633a7a1d031eb48d35e4992779ca331aa09b14b7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002509.fa
@@ -0,0 +1,9 @@
+>0_1192
+MTFLQRVRRKAVGDGRLLRQVLTVLSGTTMAQLITIVGMIPLARLYSPTDFGLFAIAQSI
+VLAGTMVAALRYDIAIVLPESQSAARTVHRLASRIILLTCVVLAVILLLAHRVVSEHYGN
+PSFGIWLTVTALIVYAMAQIMNTQNWLIRMKQFGLISQNRVLAAALMLTAQLVCAPLVGG
+FEGLLIGMLVGQVLTLIVLNRRVPELRTSHPVDAPAIREMAVRYKKMPLLNAPNVLVDAV
+RDAGINILIGNIALGSLGQYSLANKATNAPVYLIRGAIAQVFLPLMARARPGELTPLVTR
+LLIRIGLVATPVFLVFYWLAPWLFPLLLGDQWGQAGLIAQALMPWLFMNTFTSPLANVYV
+TTERQGWLFGFAVVYAAAPLIFLTTSTLPLLPRVQVMAWIMAAALMCMLVMTLIITRQFD
+RRGQPAEVTPDMARPTKEPS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002510.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002510.fa
new file mode 100644
index 0000000000000000000000000000000000000000..17158e3145fa48a854c05bf4702b475869300468
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002510.fa
@@ -0,0 +1,7 @@
+>0_1197
+MRILLSSVGRRPYLVRWFRDALAANGVEGTVLAADVDPDAPSRPFADGFVSAPKVVDPGY
+ESWLRQTLVDHDVDLAVSINDFELSTWATLPEDPAWAPLVRLDAGTQRLVEDKFATSQAL
+LEAGVTSPVTWLGSTPPSTEDAAGPFVTKGRYGSASRGLRFVDRAGLPGALEEASGEVTT
+RQGVPALQQDAVPPAELIVIQERIDGVEYGLDVVCDLEGRYAGVLARRKITMRSGETDRA
+VSVDAAPFESIARGIAEAIPHPGTIDVDVFVDASGDIYVIDINPRFGGGYPFSHMAGARV
+PECYVAWALGRKAGAEWLRCRPDVVAGKFVEITATSEGGTGADA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002511.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002511.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6b836b60a2164b8c7b03c6c900bb413d293ae1c6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002511.fa
@@ -0,0 +1,8 @@
+>0_1244
+MLAVLRNPTYARLFSAQIIALLGTGLLTVALGLLAYDIAGSDAGAVMGTVMAIKMVAYVL
+VSPVTTALVSRLPARRVLIGADLVRAGVAVSLPFVTEAWQTYVLIFLLQSASATFTPTFQ
+AVIPSVLPDEREYTRALSLSRLAYDLESLVSPLLAAALLTVMAYNNLFFGTVIGFLVSAA
+LVALARFPAIQAPEPAPFLDRLTRGTRAYWARLELRGLLGVNLVVATTTSMVIVNTVVLV
+QADLGRPQQDVALLLAAYGGGSMVVALGLPRVLDAVPDRRVMLAGAAALPVLLLAAVGAM
+SGLDAGAQWAGLLVLWALMGAATAAVLTPSARLLRRNSTERTRPSVFAAQFSLSHACFLL
+TYPLAGLLGARIGLPAVGVVLVGIGAAGLALTVLAWRRAEGQPPVDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002513.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002513.fa
new file mode 100644
index 0000000000000000000000000000000000000000..38b7443fca59442d6391d7add214b441a6b372bf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002513.fa
@@ -0,0 +1,6 @@
+>0_1249
+MEFSRVGLTDMPRTLVHYTNAPAFMSILEGHALWASSIGYMNDSQEYHYLYVQARHFLEI
+GYGALRHYGDAHPEDLETFINGVGWPYANSPSVYVIALSTDDDDLNLWRAYTAPGEGYCI
+SFDSQKIRELAEKSGWRLAQVEYGASCIPVLEDLWVRAFTKVEEGESSQEVLTWVNSRLA
+EIAPFYKHESFASEREWRLVKVQANFDQEDLRFRPGVSFIVPFVVFDFGAPDQHSIVQVR
+CGPGPNQKLAFDSMDWMVDKIGWNPSRGVSNAPFRPW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002529.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002529.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3a6e7aca5d5a3949c387a4be3323b00523bcb827
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002529.fa
@@ -0,0 +1,8 @@
+>0_1316
+MTFHVAVDARSPRMSHCSCSSPRIGVSWVSSPGGVLALVGAHVQGEHVERRAAGDPAVDA
+GGLEAGAAAQGRGVGDGHVLLPRAAGAGGQRVHVTDLGVARVFEDLARPPVVGRLVVVPL
+GDDGDVRVQGAEVVVHHVVAVAAAELVQRLGDLGRLLRDEVAPGGLAGHLEGLRDGVVRV
+DRVAGVQEEVGLRGVHRRVAAHAADLRVDAVALPRGVRGPHEGLGGGGLPAEPRAGRRGE
+AGHGRLAQAAGLVLERVRHLEAGAGGQRVREDLRGVVGGPVDPAGVQGQPASEAAAQHLP
+VLVDRAQRGVQARTAGRARPQHGRVRGDVAGGDAGRQRQTGRGQATGGVAGRTGGGGVGE
+GGGGEHGGGRRGEHRTAGGGVGQGCGGLLHGARVGHAGEGHVASG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002533.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002533.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d8ab6c73ff102a4200b5d401a028fa6d39b00eaf
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002533.fa
@@ -0,0 +1,12 @@
+>0_1404
+MDPGPRLARAAPPLGPVPAAAHRRAGRAAHPPGRAGVLRTAHPADHAGPLRLPLRAGPGR
+GPPRPEPGAGHVRPDLRHGRPEHGRARHPDAARPRGRLRHHHPPPLPPGAAAGLGVRLRG
+HDLLDRPGPRRDPGGSAGGRRLRPRRLRRQRGPARRLRRHAARPRLRCPGGAPAGRRLRP
+LPRLRPLRRAGVPRLRAAGAARVRRRVPAGQRARVLVGLAARGAARAAGRPGRRVHLRRQ
+PGRAHAGARRGRDGPPGHLVQPDGGQHPGPDRPARAALPDAAAVRLGRLPRAAHPADHRA
+DGRGRALRLPRRLRPRQPPLHRAALPPGRPLPGHARRPARDHPVRRRRRHPGPRGDRHAR
+ARPRRRSHRPAAGGPDRRARLPGADGPGSPGRLRGVRGPAPHRAHPAQPGEQRDRARRGP
+ARGRARGRRRRGRQPGRGGPRHRHEPRGGAARVRPVLARRPLAQAHHGRLRARPGDRHRG
+HPPARRTARGLGRAGGGLHLHGDPAAAAARDRPGRRGARADRPVGAAHAPAVQHRGPSVR
+RGPHPARAAGPRRRRVRRRRPRRRGGDGRRRRARGGRGAASAARHAEQALLPPSRLLGTP
+AAQGDDGGRSGRDPGEDDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002540.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002540.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b3d7467a55114c0bbc9cc1185d9e09685761029a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002540.fa
@@ -0,0 +1,11 @@
+>0_1473
+MRAVEVQIHNFRSIHDARIRLEPLSLIAGANNAGKSNIIDAIRLFYGDLKWDDARDKPKV
+ASGDAEAWVEVEFKPTENELAQLKDDYKSADGTFRVRNYVSPSTGADGKARSGYYAYEND
+NLSNNLFYGAKNVGSGKVGHIVYIPAVSKIDENTKLTGPSALRELVAEVLNKVVADSPAY
+KHLTEAFGTFEGSIKAQASADGQSLESLEKEVTDEITSWEASFSLAVQSIQPEEILKTLI
+KPQLIDETHGGEIDQARFGAGFQRHLIYTLIKLAAKHANPPKVLSSEKKEFTPQLTWILF
+EEPEAFLHPSQEEVLHDSLLKLVRDGTTQVLLTTHSSRFVSRSMDDLTRLIRLRRDAGVT
+TSYQLTQPELDQLFSDALVADDSILPHGTSSADVNKAAMMASLKTELWMQSTRTTAFFSQ
+RVVLVEGPSETAIYSYLTSRGIMEPPVRGLAIIDCMGKYNIHRFVAILSAFGIDHSVLYD
+GDNGGAYDAEVTQAISGAKTTFTKRITRFVNDLETELGIAPLPRNQSSRKPQYALYNLES
+GLVDQVKLEALKQEFVDLATAS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002543.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002543.fa
new file mode 100644
index 0000000000000000000000000000000000000000..eb1ea7ff815dd5263bb153b0984a514d3cdf9b3b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002543.fa
@@ -0,0 +1,8 @@
+>0_1479
+MHLPIRAQGTTLADEQAKILDDEFFLSNPLSHFSSRVSMLLETARSSYEASPENEPEFFN
+ALGLDSADTALKFDTQHRSVQVAIDALSLRHQAAEALTRFIYARVAATPRKGDAKSTYLA
+IADCPNPMIKVIEANKAAHDADPHRFLQLLFPPGIVVEGPVVGAAETAVEWANHAVWLLT
+SDELSINAAHNKLKHGLATSARGDVRIELITTPPNEDGTIPTSAFGEGKSLPLFDRPMLT
+YLSRPPKDLRQGLEAVSLRVDLPVVLAQTWMMANVYAAMFHIAAREHYGKSLPEGVAPFP
+TRVVGRLPEHVIGGRPLGYRSAATLPPDGTTAPRPSGVAFFKQFWPMTVDFESKTQGVVV
+DA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002551.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002551.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3d9df3fedb646e0ab0dded028980e2003042d4fb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002551.fa
@@ -0,0 +1,7 @@
+>0_1708
+MYFFLNDEEAGALVMAAGYYAADQWGEDEWLSFGRETGTTDIIKKHDRLLRSWSFGDPDY
+TDACIAVMGQILKEGPDPQAGQAGKMDLLRDSMPDLPDWVRKNGPGRTRRLFHEYISARA
+NSEIPKEWLPASAPTTSTSAGKPEILPKELDGLNSRSVPTQLENSSQSGPDVNDKWDSVN
+ELTDKEPAPREQVVPTYDPTSSPREVFIVHGHDTAAVDSLKVFIQERFGVMPRNLQSAPG
+IGRTIIEKFEDSGSRVDIAVILLTPDDIGAAKAAVDNGEEPQPRARQNVVLEMGYFIARV
+GRSRVVVLNGGVELPSDIHGVSYISYPGDSWKDELFHELKSMGLVASSD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002554.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002554.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3ccbe494258bfa1e8149eeebf3fc3f490623ce59
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002554.fa
@@ -0,0 +1,2 @@
+>0_1777
+MTALASLASPAALAPLAAFPAPPPGTASRSAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002555.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002555.fa
new file mode 100644
index 0000000000000000000000000000000000000000..be5a1c32509bf73f24bd60f41c83dfa96059cd57
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002555.fa
@@ -0,0 +1,4 @@
+>0_1802
+MAEDPAAAMAAAWRELTPAAGRLAVLMDNPRSDTSMPRCLEQHRDDPAACAYGKAEGIEE
+SGAPALQAAAASAAADPQWGLVDVNHLVCPGEDACAPVIGEALVLFDTNHFTATFARTLA
+PELGEQIEALLP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002558.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002558.fa
new file mode 100644
index 0000000000000000000000000000000000000000..bc1dac6b60df8eb726057e1fa3643eaa6dd3c507
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002558.fa
@@ -0,0 +1,2 @@
+>0_1820
+MMMSFRSTGKGRRGACGAVAGFVLVVAAAG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002559.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002559.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c4d984a612fb6617aa4ef568b07f03eaf259a8c7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002559.fa
@@ -0,0 +1,2 @@
+>0_1821
+MPCPTWLDVVEARLPAAKDMLKKLDEGVDFIGVMPEAMKGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002561.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002561.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4f52f444388c8eb2ec770b753d0820131527128d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002561.fa
@@ -0,0 +1,4 @@
+>0_1828
+MPSVLFVLSASGHWTLKDGTRYETGFWAEEFVVPHDVFADAGWDVAVATPGGVAPTVDQT
+SLGLTGGAPWKTARLKRDLERLAPVLDRPVDLASVDEAGHDVVFYPGGHGPLAERILADA
+EARR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002562.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002562.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4189d9560fae3f2f8ebcd6f3cd45560eadba2ef4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002562.fa
@@ -0,0 +1,2 @@
+>0_1843
+MAHGGVIRAAVGLLLRHEGEAFAALERIDNARAAVLQGAFATDTGAEGWGDWTLEGYGI
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002567.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002567.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3bcf79a4f70dac0d65c926fb730b827a2e9c2d31
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002567.fa
@@ -0,0 +1,6 @@
+>0_1898
+MTALTPFQYGATAVRTAVVDGEPHFVAADLCAVLEIGRQQDATRYLDADEKRGCLVDTPS
+GPQTMVVVTEAGMYSLVLRSRKPEAKAFKRWLTHEVLPAIRKTGAYSVQRELTEDEIIHR
+ALTLTVAKVEALEAKVAEDAPKVAAWESIVSSAGSWSYNDAAKVLCESGQIEIGEKRLVK
+ALVDWGYLYRDARGRPHVYQRYVEQGLFVVKARTYRDLVSGEVRESAAPQVRLTGKGLGV
+VRSRLTNQPAFELLGIRVVKA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002577.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002577.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0dc23637cab62f085f50cf65bffda5bfefacfa89
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002577.fa
@@ -0,0 +1,2 @@
+>0_1909
+MGDCECGRRGVLLDRELDLCILCRNRLDSAPAKEA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002578.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002578.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e13455f299add73b13ff97981131717148410011
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002578.fa
@@ -0,0 +1,3 @@
+>0_1910
+MSYHHINEDGTAVVCTAQESAWCRSRPNCDTEEWNEHGCAEHDREHALTPGHECWQARNV
+NAWGGPYPDDQPDLRPGAPVTLTYEGEGIVTWDYVNGARP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002582.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002582.fa
new file mode 100644
index 0000000000000000000000000000000000000000..304529e83fec0daea29f6df1832bfa929eb67127
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002582.fa
@@ -0,0 +1,9 @@
+>0_1914
+MPWLKVSDASAMHPIALAAMEAEDADERLVNELFGYVARCAVMSAQHEQDYVVTLATARV
+TAGGDARFKVLAAAAERAGYWTRTTVKDASGAERPAFRLVEEKDLFHMLLKKERAWETQR
+RADVANPELTVPVRLRDGDGCRWCGKSVAWRDRKSGRGATYDHVKPGQGAASPEDLVVAC
+RACNGARKDEENTSFSRTLMAPPFRPLYGPDTLAFLAEHDVVPEQQDTATAAERQSQRET
+APTPTTAAPATAAGSTARTATAAPRQGVRETADGQERRRGAQVRDVDGQAADAAAAHAQR
+EADARRAEAERERRLDAWLADHGISVAPAPATALSPLDVEEADWAPSEGDAGPPGGPDLQ
+IPADRQAEGSGFPGTGRDGSGREGPGLDVSGTGGARDGSGLDGGSAGSGRRRRRRGRRGG
+RGRGGEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002583.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002583.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2ac04ecf3de943c00326fdfb5bde1878e623d4ba
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002583.fa
@@ -0,0 +1,3 @@
+>0_1915
+MRQDEYVRMMAAGMSEDQLQRGVERLARSLGWLAYHTHDSRRSSPGFPDLVLVRGDRVLF
+RELKTEKGRATPAQKTWLAALTAAGMDAGLWRPVQWFDRTIERELA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002590.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002590.fa
new file mode 100644
index 0000000000000000000000000000000000000000..370823f713101df57dfb69bde121464d040183b3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002590.fa
@@ -0,0 +1,10 @@
+>0_1922
+MSVNPRYLLTPPADDVDETHADGAIALAAGYGLVLDDWQQQAVRAWLRCGPDGRFLASTW
+GLSAARQNGKNAALEAVELYLMTVLGWKIIHTSHKLGSARKAFKRLTKFFGRFKGDPSAP
+YPELSALIQEFRRTNSQEAIELTNGGLIELSARTSGGARGTSYDLLVVDEAQEYEELEQE
+ALEPTISASAHGQPIVIYLGTPPKTIGERGEPFIRVRSKAVSGQMERTAWVEYGASLEID
+RMTDVELQAAVRDDHHVRDANPAVGARVTWETVNGERGRWSARTFARERLNCFPLPRTSS
+EKAIEEDVWAARHDPDPDPHARLAAVGLDMDPARTKVTITMAYWAEAGVHVEVAAAAPYA
+DAGVASLVAWLWERCKARVPVVIDSFSPARAIEVHLLQKRMKVRVLSAREWADACMGLYD
+AVSAGAVTHFDQTQLSLAVLAATKAPVGTQGAWRMQWPKDDVDRAPAVAGVCAHFGAMKF
+GRRPREGAASQKQTGHSFV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002591.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002591.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7f28e58f2210b5d48924632d83840a35ba89de91
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002591.fa
@@ -0,0 +1,9 @@
+>0_1923
+MAVLNTQEETLFLRMRDQVRRHQPTNRHRENLFNARKQLQKIGFSVPESMRSFAATVGWP
+EKAVMVPARRLKPTGFVSSREEELADELNAHLDSGYAAAVEQYAIEASVRHGCSFVFATP
+GDQTAGDPDVVLSARSALEASAIVDRRTLRTIAGLEATDEAGVWLMHVPGEVLLVDTRTG
+EHVVRERYRAAPGEVGVVPYVWDRSLDRPFGRSRITNPVIDLSGQAVRIMLRQEVQAEHF
+SSPQRVLSGAREEAFTDETGQRRPMWQVATGAIWGIPDFFDEEIGEWRRAELTQMAAASM
+QPHTDHLRTVAMMFAGETSIPISQLGIVHDNPSSADAIRQHESAMVDLVQAQIPSYMASR
+KALGRLVLAVAHRGLSPATNTALAHVHARFADPGTITRAALADRAQKFAAAYPELRGSSV
+ALRAWGFDDVEVRELQDHLQRAESAGLVRQLLEAGPGVGMSGHAEP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002592.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002592.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ea5cef64cee9f691b2980914354f3a06198f5003
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002592.fa
@@ -0,0 +1,6 @@
+>0_1924
+MPSREQLEAFNRDQALLHDLVMGALDGMARRLGRFATPDQVLTALLEAMPELVGQFGHAS
+ATLAAEWLEEVYGIRAVLGETYPLEAVTQTLRRHAGQLWQGAGPEAVVAAMRDDVARWVK
+AAGRGTLRDSATANGLRWARVPSGPITCAFCLMLASRDAVYLTRNRALRTKSGEDRYHND
+CDCIPTPIRGPQDYPTGYDPDELYSVYSEATSAVGSRANTTAILENIRRAHPGRVRDGVH
+TTN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002602.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002602.fa
new file mode 100644
index 0000000000000000000000000000000000000000..69760eb9a7386087b94ade81124aaff694eae06e
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002602.fa
@@ -0,0 +1,2 @@
+>0_1934
+MSEKTTFTKGDLSITTTDPAEKVRLRSQGFAAADTTAPAKATPKRADAPATDQKN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002604.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002604.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9894ba57830fc502876b00efa07e95c1fe13661b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002604.fa
@@ -0,0 +1,4 @@
+>0_1936
+MFGVDLAAWVAAGRWLGVLELIHSLPRSSRLREAQLNDPDVAADLLELQEAQDEPEEWAP
+ALAETSLITDLLSALIGEVRSLRSEQTAIASGKKPRPVKPIPGPRTALETAKALRAEKYA
+AETLSRFGF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002607.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002607.fa
new file mode 100644
index 0000000000000000000000000000000000000000..41e1148063b473e773a414b96816b8a8d591c5af
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002607.fa
@@ -0,0 +1,8 @@
+>0_1939
+MTDQLHLIDAPEWGPAAVDLLAGSRDVEWIYELVHARTNRFIRTLRGVRNFRFENNLHAT
+IRSGGSCIWQGAEDIDWMEHRLRAHQRISHRGQSLQWTVGTFIVESPTRVLTDKTRGAQD
+LQLFDAMYRLDVQTSTVSEWVAHKGSNIIGTVRHLLDRQGIKHALEDSDAVFASQMSWEA
+GTTYLRMVNDMLAAANFTAVYADPQGVLRAGPARAATSRGVAWTFRDDSTAMRYAPEVTH
+NRDTYSIPNEVVLIARSDDPDTLPMSASARDTSSPYGTMRRGMVITKVEEVDAASQAILQ
+ARADLRLKEVQRPASTFTFQHLPLPLEMSQVVRFVRTRHDVDVLAVVEKTGFDDGTGLAE
+TTVREVVS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002611.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002611.fa
new file mode 100644
index 0000000000000000000000000000000000000000..51c16d4d28cd41e437b529d047101bb6123226d4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002611.fa
@@ -0,0 +1,4 @@
+>0_1943
+MPDRILRTSAGVLGGLIIILGLTYAWLGITWLISPTPTRLAGIEWAPIGAHTVGIWWIAG
+GLVALIGGAWSARPVAAGVGAFAAILTPAVVAGLFLVSVWHGNDRGLITAGSYLPYALLA
+AWVTWRSGRGSEDTARDMAATRHDSQEGRV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002613.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002613.fa
new file mode 100644
index 0000000000000000000000000000000000000000..115d76e8f57ea6fc13b6e51716a3396162b33bc4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002613.fa
@@ -0,0 +1,7 @@
+>0_1945
+MPTPFLTGLGRVLTTAGVTWEGVPGWETRTGFASGYRDVYGATVHTTETHDATFAKGGDA
+PTLEWVVDADGSRRGAHTYALLIGRSGKVYLIAAGPGWQAGHGSWPSKLGPNPGIPDDQA
+NFHTVGVSMDANESQYPPTEAQLVSLVKVLAALRAEWAPDRFDVMMHGEWSPARRTDPTR
+VPGGWDAIRKAVAAGAWPVQPKPTPPTPAATSSRPAPATGTYTVRPGDTLGGIAKAHGTT
+WQALAKLNALADPHLIEVGQRLRVPALPTHTVAKGEGLWGIARQHGLTVDQLANLNGLTR
+TSTIHPGQTLRLA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002614.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002614.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d12bec1e366013fe57d5bfca2b2ff522cfe643fc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002614.fa
@@ -0,0 +1,3 @@
+>0_1946
+MTKNAILRYFTYDHLTRSPLRDVSKLFHDLAGTLDAQLPDGPEKSTALRKLLESKDAAVR
+SALDIEGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002615.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002615.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2113d76a844caa1829794eb7db8a8f9f601d7949
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002615.fa
@@ -0,0 +1,3 @@
+>0_1947
+MQTRRTPIIDTLTLWTGSVQAALAAGAGAAILSDLPGWVAFSLAVGLFVVGMVQAGLRWA
+AQNATVPVGDVVEVREGSDVVAGPANDQVAEGAFVRELGRSPRHRVAD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002619.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002619.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fbdff68f58c044dc991da477f8b68269ca338152
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002619.fa
@@ -0,0 +1,9 @@
+>0_2004
+MVRAAIAGEKDAARLLDQVVDLVASALARIAGSDETYRRELFDRLTVDPSGWAVPWDRLR
+APASTLSVLYNFQPFADTGSSVASKRLRVFGHTSDVIACSFLHHKKVDPTIGMISRPYLA
+RRRYLEMRPSWASWHAFADFAVQARDQADAWIAAGTRYERLYTRANWAPSHYAGALIHEA
+HPELIWTAEFSDPLSLDVQGKRRGDLLDRSDPMLARLTAPVEADFGRIPDEHFSIFGLAE
+ILPYALADSILFTNEHQMAEMLDHIYSPALRERVQGRAEVSHHPTLAPEYYDARPVTYEV
+DPTMVNVAYFGEFYVTRGITDITLAMAMLPQHIRDRIRLHVFTNFVPEGGLATRPPGFSK
+AQFDALVRRAQDGVGAHGMEHLVRFNASLPYLDFLAVTRQFDYLVVNDAQSGSRHTRNPF
+LPSKWSDYRGSQAEVWALVEDGSMLSTMPTALQTPLGDPAAARDVLWDRVEAKQEERR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002621.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002621.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3c65127ff4e0cf64bad618ffce411bb9b40ecbf1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002621.fa
@@ -0,0 +1,7 @@
+>0_2006
+MNPYQQLLYRGMAAQDIVTTPVLSVDGFNPLLAVRAETSGVGVHLHWLNPVLAGARNGAD
+ARARVDRFLERVDEFIDADGRVVWTVHNVLPHDAVHLEQERRLQQGVADRAHLVHVMHPD
+TADVLGESLRWDSARTVVAPHPSYAGAYPDTVRRDEARGVLGIHEDEVVYVALGAIKAYK
+GIDTLLDAFDQLCREDATPRRLVVAGPVDTSPHTRALVKRLRTNPRVLVQAGPVPGDRVQ
+YLLRSADMAVLPHLRALNSGGALLGPTYGLPVLAARVGVLPAVLQPEFTEFFQDHTVPGM
+TAGLRAADRLLGAEARDAASDFARQHDPDLIGERFAQVLRARLWAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002624.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002624.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0ffa74b11bb42a00819379c823d3c8d864e4189f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002624.fa
@@ -0,0 +1,9 @@
+>0_2054
+MADRGHYELPHSGHNGIELVGTFAYEDAILRALPRLPADGASVEAQFTVDLVPEPDNPHD
+RRAVSVRHRGEVLGYLSRDLAADYHLPVKRILASGARLQTGARVFAYLSWDDKPEVRVYV
+GLPAPDALTPLNDGYPATTAVLPYGRTYQVTKEDQHFEHLFDYVPRSGQGPVILTLHKSE
+AMLRNGTVRRTVEVRLDAEKAGELTAATSAHYLPVIEHAEALGRVVGVWGTITGSGLAAE
+LTIKGAKSSELTDEWLREMPIFPHLVPEAHSYEVPDAYQGEPKTKGRSRAMGGHSAARLR
+EQLDQRFVSTSPAELDTTPSPSTPSPEKKPGKPQPPANPTPVPLNRDVTRLGIGTGPRTP
+IYYTVKGKEVFVDDRDRSSAGKHPRRTAWLLIAGLAVLGLILSGVPGIGPFLTLLTLLLV
+LISGPDQLRKAKVLDIDPHGTGHPSRDWRDRERGDVGEENQDHDTEDGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002627.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002627.fa
new file mode 100644
index 0000000000000000000000000000000000000000..53c0bb44f272bc36f1c3d88142ecb94da39028d0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002627.fa
@@ -0,0 +1,4 @@
+>0_2117
+MHSESLDPSPVPDRHGSDPDRPDPLVVVDGAEGRVVPAPTAAPSSTHDAGGDPASGGEGV
+DPAAAEPPTLVSVGVLADWLGLSPTEPLPEVPEAPAYAQPGRCRPRRLVLLDVRFRATGG
+GADHEAYLRGHLPGAVYVSPAQPTG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002630.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002630.fa
new file mode 100644
index 0000000000000000000000000000000000000000..11704f8992c80f8b459304c7edf2472f7acfc521
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002630.fa
@@ -0,0 +1,5 @@
+>0_2154
+MADQNPTITDEQRGRLDQALTVVLTEGVPIQEVTAAQLTSRLDGGARKTVVLAYLREMKA
+KAPDTEDAIPAPPEDLATASVQALVRAVWEAAYTAARAEVAETVAEAVSARQAAEDAAAQ
+AQDELDTAREEFQRESSQLEARLNKAKEQVTRDAGAARDAATAATEARAREGEVRAQLAR
+EQERTAALEARMDALIVKLTEPVQETPEPKEAPTRSRRTGAKKTPASPTEPTKS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002631.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002631.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d3ea8ce086f0aaec5c7a2296286bdf7d951a8c0a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002631.fa
@@ -0,0 +1,6 @@
+>0_2155
+MPRVPIRVPLTIAACAALLTGCASGADSTDPGSTTGTTAGQGQSQSAQEGASQPADPQDK
+PKTGEQPEFASGNDLLASVNTDLINAGATACVWDIKSEGPKYNNPEAYFWAECDHKSAGE
+LEFEGSTDKPHGVEVIYWHPDPAVLKENVIGDSENPVWATGKNWVILTDSYISPNYPFYG
+ENAEASDEEKQSWRDRADRVRTETGQMLGVRFTDGRDAGNQLTTGIDGNGSGTSGSSTDA
+P
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002633.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002633.fa
new file mode 100644
index 0000000000000000000000000000000000000000..93b1fb994518fcee2fbd1e2ac1f84c647f7b13af
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002633.fa
@@ -0,0 +1,7 @@
+>0_2162
+MEPSATAPETVSTAAVCSRDERPPKKGHPPVEPLPPHEPMAPERDQELQAVLAWLQARPI
+QDELTEAVLQSVHYILDGASTGRVYLHDPEVDSDERSAVGVNLQYRVLHVLGLPKEAPLD
+TTIEGIPVDIKCTTGTGYGWMIPPEAQCELCLLVKIDAEHDRFAAYLMRTHRVWLNEGGN
+QDKKRTITAAARKQYAVQLFEGEWAPLPRNPLRDLTSDQRELVLNLHPDRQRGQETRIKA
+MFSYLPSTVVPRHVLETIGAGRTDPARRARAIRSQLRAEHGLILLCGKWKPERDAARSAG
+FDLTGRDWVAVPEADVDPHQLDLVLAQRD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002634.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002634.fa
new file mode 100644
index 0000000000000000000000000000000000000000..be4e024140a8b9156682ae55bbdb635451f3d357
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002634.fa
@@ -0,0 +1,6 @@
+>0_2163
+MAQLNWTYEEVVLAADLVARNGWKGLRSADPRVAELSRLLRAATIHPLEGRPHNFRSPSS
+VQRKTFDIATRHPDYQGTPTRGGKHEAAVIGAFLDRPEQMHDLARYLHASLGGADPAAGV
+AEPAGVVADPEEEALAAWEGMTRAVRHLRRERDPKLRAAKITSMVAAGGRIACEICGFDF
+EQTYGAVGQGYIEVHHVRPLHDSGPVLTRLEDLALLCSNCHRMIHRARPWLTPGELAARI
+ADRGLVRGSRPDHAARLCDV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002635.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002635.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1efe60113af57e5dbf211871ddd1a5b17cce6155
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002635.fa
@@ -0,0 +1,5 @@
+>0_2165
+MTRRSGVDRNAIRRIARQIERDFNKEFERRPLRIPVEHEIAPGSPQPHPHVVNHYAGPVV
+TINGDHAQVAWNGGTNIGHREESQTVTPGFEQVAKVVSDVLAQADALELEEDERLELQQT
+GEEILTEVVKEEPDTGAIRRTLRTLKGFLAPALTAGASAAVSTEAQEAAQAAFDAIQALS
+F
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002643.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002643.fa
new file mode 100644
index 0000000000000000000000000000000000000000..134ff3f6d7ca583ebce1d629c3cf3e330d4c1eb4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002643.fa
@@ -0,0 +1,3 @@
+>0_2198
+MTAEQAREAGHQVKVASKPVATIAAMPRPKIEEDAHGVIEVVVDAATDLVLGARPHCVEA
+QGLVNLVALAMRADVMASALRDGIWTHPSATEALNEVLGELG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002645.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002645.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c836eb90b894f1f40b891fd95e7c6cd583536603
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002645.fa
@@ -0,0 +1,3 @@
+>0_2248
+MATGDTVAVGQELAVVEAMKMEHPVTAAVAGVVTVHVAEGDSVAAQALIAAVAPAGADES
+AEPAPHEASAQNA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002646.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002646.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2d07837614577561f69a8cf6ca084818743aaf51
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002646.fa
@@ -0,0 +1,3 @@
+>0_2274
+MWFLIALAVMAVIGFILRPISSLLAMAKFIAFAVAAVAGFAWYMGGPADMYAGPTILGAL
+AWIGLMFVPQPRFG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002647.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002647.fa
new file mode 100644
index 0000000000000000000000000000000000000000..cd9b40f7d70fb0625bcb68ab637380b610aad3c7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002647.fa
@@ -0,0 +1,3 @@
+>0_2275
+MSNQRHTTADVAAFESWLSVFRRPQTVNNRVHYATRLETWATAHGCTPWTLDTTQISAWL
+STVGK
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002651.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002651.fa
new file mode 100644
index 0000000000000000000000000000000000000000..52a6974c17cb5ff56536575a024312164db1d178
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002651.fa
@@ -0,0 +1,3 @@
+>0_2311
+MKVELLHIADCPNTGIAEANARAALDALGLGAVPVELVTIGTEAEAANTGFGGSPTILVD
+GIDLFPTTLVHSLACRVYVAENGFAGAPAATQIDEALRDRMQGGESDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002659.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002659.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6235011999634d3540e027c066fd17555b2285c8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002659.fa
@@ -0,0 +1,8 @@
+>0_2443
+MKTNIFAHGFSDNHAVSFGASRKGRVWSNEQARDIHDWVRWASQVGPTITDTSISLDSVM
+SGFLLPEPARERPPLVPLSIEWPYQLVSTFSDRRKVSHEDQAFSLLDTELSLTDHTADQP
+LRFEVKTPSWSLEFEFEFHEDGPPTIRPVSDDGQVVTPSGVGSLAAFLTGHGLLVTFEDE
+VVLVEQGFLLKPERERRLFPIDAVETIDWSGVNIRRESQGAERDPATIQHRAIQALSAED
+EWEVVLDDDGTGELADIALLRRTDDVLEVLLVHCKYSSSDTPAARINDLYDVCGQSMKMN
+RAKSMSELLTKRLFRREQERQNAGKSGLIVGDIETLAAIVFEARYRLLKVTVAIVQPGMS
+KSAASEDMRSLLGATDRFLAETYGMKLRVIASA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002660.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002660.fa
new file mode 100644
index 0000000000000000000000000000000000000000..89d0c4976bfb74928cf15b62bf5177cd85984242
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002660.fa
@@ -0,0 +1,22 @@
+>0_2444
+MPVLRSLGPAYQEDLHGRNAAVLLDVLTDKSATAAKNIALAGHYGSGKSSVILGVQDGLD
+ERKIKWVNLSLSTLGIDDTKRARIQQDGSLAPLTNLIQKEIVKQLLYRKPPSDMPGSRYF
+RIDSFKPWPALMWGGVVAVGFFVIAVLLGLVSRIQDVAPASVINSHSWVAWATVGALGAF
+VGGVWFLGLRVLQNRIRVESVSAGGAAVKLSAKENSYFDEYLDEIVYFFQRTKTKVAIFE
+DLDRFKDPHIFETLRELNTVLNNSEQIKSRPIQFVYAVRDSIFEELQVDAESDGEGTKTS
+ALHASALESAPSANRTKFFDLVVPMVPFITHRSARDLLAAEFAKADHQPSTALVNLVGAH
+LTDMRVIRNIRNEYEIYRASVLGENGLKGLTADRLFAMMVYKNLHLEDFEAIRLGTSKID
+EAHRAFHKMVEYQTRHQAMRSKTTQNRVRTKALWDKHAQAAGERLQEVLPIVYRATGRGG
+KPVLRYQSQDYQLSDLTSGDFWKSLYENRDSVHLLRPGYGGIELSFDELISLTGNGTDGL
+DDAVDADVAHLQRDSRVALETKDFVMKATMAELIARTDLVMPTTDGDERNLDSIVSELLS
+PLGRDLLTKGHIDENFTLYCSDYHDIAISVSAMNFILHCVQSDRAAPHFHFDEASSIEAV
+EREMGSRFLDGESVFNVEVFDYYLPARPERLDKAMDKLAVRSGDDSSFLDAYLIDGKSRD
+VLISRLAPRWDGVFIHLAEKAPLELDVVATLVDAAITCAAKDTEYEASDQVAEFVSEHYA
+QMQAFVGETDAAKATDVMALLRRLGAQIGDLGVLGQTQRQAAVAAGLYPVTRMNLSVALD
+ESTGLALDVMNAADDSVYRHVLSNLDDYLDVLQDHEVTVDSPDAFVAVLGDVADAAEFAV
+RTVAARAADSCEVVDLTDLDDGAWGHVVSAGRFAPTVWNVSQFVSKFGVNEELIENLGTL
+NLTKAEEVDEEPRLGLAYALANSGALDSAATVRLLGQLNLPDGLDPERLSDVGLALLPTL
+LEKDLVPDTADTYALVSDRPFAFREEYFAASKQLASYVCELELSSDDLARVMRSRRLAPP
+VKRAIAHDVEFITDRLSRQSVIAFCEWASKGNDVSVELLVKLAEAGAPAEHVLGLLEPYL
+PNIELGLLDQILLGLGDDYEPLTRTGHHRPRLKDRAGTEELLKALQSRGRVSSFGREKLI
+GGIRVNMRH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002663.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002663.fa
new file mode 100644
index 0000000000000000000000000000000000000000..55fc68c2bcf64f8f426cff34c88e0bf5d2931a09
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002663.fa
@@ -0,0 +1,7 @@
+>0_2522
+MADAPLGPVPRLGSPPEGSGRRPTRTAGMLCLGGRPRRLWDHPTYPPEVLVDWSSVTKTV
+TAAAASHLAAAGALDLDAPFRTWVPEIGNVPATVRDLAVHRSGMPTMHPTAARGLLRDPA
+RGALDEEELLGHCPGLFRSLREDHGRPRYSNLGYAFLGLVVERASGEDWWTAVRRLVLPA
+DRLPTVTVDPAPDLQRRPGLGPLRVSPWRLSSSAYRPAGGLWSTLSDLLAHAELASLPTA
+SRLGWHRDPSGLLVHTGSGRYSSCCAVLVPATGDSGVAHSTAVPAPRLQRRLVKALLSHL
+R
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002679.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002679.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4c03167122f8e7e4403f6533e2b697fbe1f00046
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002679.fa
@@ -0,0 +1,11 @@
+>0_2597
+MPVAGVAGLAMDAAFPALGWWPLAFVSVTLSLVTLIGRRSWGALLVGTVFGAAFWFPHVS
+WSAQFLGEHPLSWVPWVALAGALTIYTAVLTVPIALAYRWLPRRRNAFAMRLLALPLLVA
+GAWTIRELIMGSWPYGGFPWGRVAMSQSESPIAPVASWVGVSGLGFLMVAVCAAAIEAVR
+WIVRAQPARGNATEHPRTPLASWAASIPVLGLAAVMVLVPQFPTSHAGTIRVGAVQGNGP
+AAYVDEHEPGAVLESQLAASAPLEDEQVDIVLWPEGGVDSDPLADEATAHALDDAAARYD
+APILLNAAAADGHLVYNTSFLWTSNGPTAAHAKRHPVPFGEYVPDRWFYGALVPSLVDLL
+EREYAAGVDTPAIEVDGVEVGLAICFDVAFDDVIHEGAHSGAQVLMFQTNNADFRDTDEH
+LQQLAFARMRAIETGRSVVNLSTTGTSQVLAPNGATLAALAADEPGLMIADLELRDGLTA
+AVMLAQSINTLIVSGTLAGFLVLAFLLLRDRASSRHHRVLDSSQRSSIGLHECADAHRRE
+RL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002681.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002681.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3588011805cfd3697ef258d21ae7fff4e6caa0c6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002681.fa
@@ -0,0 +1,3 @@
+>0_2600
+MRFTAGLIVLVSLLVAEFLWPESRFIAFALSAGLVVAALTGSCLMGRILSRMPWNKVTAS
+PTARSAIASIPVATQEL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002682.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002682.fa
new file mode 100644
index 0000000000000000000000000000000000000000..aeb74a4187b4eec54a44eec1b4c151674f90e114
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002682.fa
@@ -0,0 +1,8 @@
+>0_2602
+MTPRRGRSSLALAAVAALLVTGCGASEPEPVRDPYPVDGSLPVVDTSGLQLPTPFEELEV
+VDPGWDITPQYADGVYLAAGERDGVLEFTAVDVYGDVLWAAQRPASCTGFVVTTDAHGRA
+LAILGDLQITADALAATTATAYDLTTGEQVWGPVEVPGPYQGPGLVFAAPPDGFMGETGP
+RVALDPTTGDVAADESSPEGIRIIGEYHGIVLLTHEDALIARDTADDHELWRIPLAEHGW
+TAASISASLRPEPGDGLALIATSETTGALLNLDQGSIVSSTARDAAVDPTTGTLVTLDDT
+GLHGYDADDRPLWSLPVAAETTIAAIGGVFLYLREDGAIRVHNVLTGDVAQAYEPDGQGP
+IIVPTHITINGAALLLQERRHLVATIAESPLNESFPTSSHAGMSIVGARVADST
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002688.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002688.fa
new file mode 100644
index 0000000000000000000000000000000000000000..af3adbabdbc1e9a1da15f96e2d934fc082208822
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002688.fa
@@ -0,0 +1,5 @@
+>0_2609
+MRTIGLLHGMSSVATVDYYRRINDRVNELRGGHERAELVLSSVNFGVIERCVRAEAWDEA
+GQYLAGKARGLQRAGADFIACGSNTMHRVAPVIEAAITVPFLHIADVVATTATDIGVTRL
+GLLGTAPTMEQDFYRRRLERAGFTVLPPEPVDRTTVDQIIFDELTRHVFRPESRETYIRV
+MTDLHAAGAEAIVLGCTEIILLVGPDDVPGLPLLDSTTLHVEAIVQTAMSRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002689.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002689.fa
new file mode 100644
index 0000000000000000000000000000000000000000..50b8622bdeb33cc556178c87a9248b0dacf45656
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002689.fa
@@ -0,0 +1,2 @@
+>0_2613
+MTHANAPLTPTGRLRMVHRHLHDGIPQAHVAAEFRVSRPTVATWGSSPS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002694.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002694.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f69e9731c480be58432d2c27c1608cbbb45d5c71
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002694.fa
@@ -0,0 +1,9 @@
+>1_32
+MTGQWEWTTLREVLVPQPNKKPLQQGWSPKCIPSPSPDSETWGVLKTTAIQPGRFDETQN
+KELPATLAPRPAIEVQQGDLLMTCAGPRSRCGIPALVRSTRPRLMMSGKMYRFRPVEGVD
+SAFLEKWLLSAEAQARIDAMKTGISDSGLNLTQDRFLALPVPMPGMEEQRRIVDIVEEHF
+ARLDVAEGSLDVADKRLEGLVESAIQLCLDWGSVRQVELRSLLAEPLANGRSVPTREDGF
+PVIRLTAIRDGWVDPLQRKGGDWSRNDAKKWLIRPGDFLLSRGNGSLGLVGRGGLVLDDP
+GEVAFPDTIVRLRPNREKIDLDYLSMLWNSRLVRRQIESRVRTTAGIYKINQEALKSIEI
+PVPSLEVQGRLASSIGGVRLAGRRIAGVVEAERRRTAALRRAILTAAFAGRLSGRSTDTE
+VIEELVASR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002704.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002704.fa
new file mode 100644
index 0000000000000000000000000000000000000000..81987973110fe6c4439c8d863cf5c4056ebffe07
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002704.fa
@@ -0,0 +1,3 @@
+>1_497
+MPNLNDFHRPALDDVTTVDPRTPLLPFLRQLARAELVVGSSLHGVILAERLGVPARVIRS
+DAEPSFKYEDYYEGTGRANVRLAADIHHALDLGGVDSGSTVDATLAAAFPRDLWER
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002711.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002711.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ef4803fe5a7ea71f4aeac163e599daefac4d52b6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002711.fa
@@ -0,0 +1,9 @@
+>1_581
+MPGATPIGDEAEVPTLGAVDHLRVLTRVLLGPVVKGPIVRRPAAVGLAERLDADAAGVAE
+MQRLRSRYGAGPVQLRIPGRRIALLLDPADVRRVLNDSPTPFSPATLEKRGALNHFEPAG
+SLVSTPQQRLSRRPFNEQILETPRPVHSHAEAMKAVITEEVSTLGGHVDFTGTLDWESFA
+VMWARMVRRIVLGASARDDDQVTDDLRRLRARGNFSYLMPQNRRLRERFLRRLQHYIELA
+EPGSLAALVAQTPAPDEAVPHQQVPQWLFAFDAEAWATFRALALLTNHPGATGTARSEVA
+HAPDLPFLRATVLESLRLWPTTPLILRDSTATTHWRNGTLPPDTALVIYAPFFHRDDQTL
+PQAHRFSPELWLQERDDNAWPLVPFSAGPGMCPGRNVVLLTSSLVLGELLRQHDFTAQEP
+LDTGQLPGTLSPFSSHFTVRHD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002714.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002714.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9da48a7797a55ec9eafb70d89fa6b4736c5fc020
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002714.fa
@@ -0,0 +1,3 @@
+>1_594
+MGKTVHRSASTGRFVKTSTAKRNPRTTTTETIPSPGGATRSVGRSAITGRFVTTSTVARH
+PGTTITQQVSR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002715.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002715.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3cae0482451d2f2c323de7ee2eb13ec7988fd358
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002715.fa
@@ -0,0 +1,3 @@
+>1_596
+MVSAEHGPSGSPYGEVLPGVGGNDSAQDPLVTWWLVLYGLSNLVRYHPAAWRATLDVDKS
+TLAVPLEQLVSFASEKVPDLLFEAFVDLGGGRQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002718.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002718.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a466a736c2ac232147784c65771a3ee66c78f352
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002718.fa
@@ -0,0 +1,13 @@
+>1_677
+MTARIAVVGSALTRSALVADPRLSVPAGHFLARVSMAGLGTPPVEDADLTGVASDFRREL
+VRRDVDRMLVADLVRLDPDAIVVDVADERFALDVLPSGAVVTVSPEYLESAPPQDGRRRV
+PSGDDEHFALWVAGWRTFLSTLDAVGLRERLILHHGGMAVRTADGTAARHEAAILAAARY
+ADRLADRAAQDLDPARVVRVDDAIRHAALADDGTADPLALAPAAAAALAAGVVAVLDGRD
+PWEVDGLVDVSPDAEPVEPAAPQAPAEPAAPEPSAEPAAPEPSAPYRDVVESDYANYGVD
+PVRWGSVEEFAASGFGPGLHILPLPDGNHLDLIIRGDLGGVGERESVVVFLTGAMSQRNS
+VAPPFFAGRRLSYELGIPWVAVSDPSMQLADDLLLGWYTGSPGSQAHATLLATLRALADG
+LGRDLLLVGGSGGGFAALRLNEELEGRSSVFAWNPQTDLLDYHPPTVRDYLRTLFPGKEL
+DPVAEREAVEARLAEEGIGHRVGTLDAGRRVVVFQNAGDHHVEGHLLPLVHRTPGMTGGP
+RRFATDAEHQVRIATWGAGHAALPAHVTARAVDAMRRGHSASTVATDIDALLAHERGDDS
+DGPDVLVTAEPGGLSRVDWAAFPGEADDGHACTLSRMHGEDVVDQVEHIGPPVVLPRLDD
+GEHWRLEAFDARGRRVHEIHVDGRGDPVLFGGTGGSARPRRARQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002720.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002720.fa
new file mode 100644
index 0000000000000000000000000000000000000000..df45d1ba372e5ec6b52049d7ae6badd143bbd032
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002720.fa
@@ -0,0 +1,6 @@
+>1_810
+MKRPERPISSDWLDLRRPADERARAGSAPLLDALAEHFTETGADSPVDVIDVGAGTGANP
+AWLAPRLRFSQQWTLLDHDADLLELVPSQLQDARVRHVRRVTAGIEDLGSLDEAEQDRCL
+ITCSAVLDLLTMDQLAGFCDFLAERRMPALLSLSVTGDVVLDPGHWADAQITRAFNQHQR
+RGSLAGPDAVGYAAGRLRADGMRVEVAESPWKLGPADDVLLRRYLHDRAQAVIEGAPDMG
+DVVDSWLAEHLGQSDEGRLHVEVRHRELLCLPPG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002721.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002721.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e6af62cb49a83efdb9d7c01c405fc36fe415d09f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002721.fa
@@ -0,0 +1,4 @@
+>1_812
+MYRLTVRDHVMIAHSLPDPFFGPAQALHGATLVVEVTWRRRELGPQSVVMDIGAATSMLS
+EVLEPLRYTNLDEHPAFAGRLSTTEAIAGHISDELRRHFDTTEFAGMEVLLREHPDAWAA
+HDVDFA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002722.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002722.fa
new file mode 100644
index 0000000000000000000000000000000000000000..65154e17535aa51be09253410e49724ad2f54e6c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002722.fa
@@ -0,0 +1,6 @@
+>1_813
+MRSLYSGVSRGTEMLVYRGEVPPEVAGRMRAPFQEGEFPFPVKYGYLSVGVVEQGPDDLL
+GRRTFCLYPHQDRYVVPVDALTVIPDDVPSRRAVLAGPVETALNALWDAPPCIGDRIAVI
+GGGMIGASLAVLLSRFPLGRLQLVDTDPVKRDMARAMGIEAVEPEALQAECDIIYHASTT
+EAGLAQGLERLGDEGELVELSWFGSHVPAVPLGTSFHARRLRITASQVSTIGRARRYRRT
+HAARMDLVMHMLQDPVFDALISGESGFADLPGAIAGLAQGELPTLCRAIRYPDPGPRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002724.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002724.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e9a781388b67d3255987b285e6fe136faa8ead07
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002724.fa
@@ -0,0 +1,8 @@
+>1_865
+MLREQLGGRAGLDAAQRLRTRVGEALGHAALEQRPLPQHDALPRRGRVGSPVAGRLGLGE
+RLTAGLPEGGEHVLAWPRPVQDGRLRDLVRHPEGLGHHARHHGVGLVLLTEGDGPCVDVA
+TLQQGEQGAGVLPAGEPQLHRAAGEHVLDPIHGRGEGGGRRLGPLLRRVVLRQRRAQARG
+DLPERGGAPHDLQRPVDRQSRDALERGDVLEAVPRVQVVGQVALVPAHARPVSGGQGERH
+QERPVGDVHVLRVLRPVETVESGHGGPRGHPVHVAFHHHGRVLTPYRAVVPETGADPADI
+PDQLIPHGMAAGDGPPVPLGSGKRGATSALEHEGDGRDGGLHDHRLLVVGRAHERCVTVS
+DRAQAAPGEVEGETPAGPTRDGEEELGHAGSPPSKAGSRSPTPSSSAIAETVRSAARPSP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002729.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002729.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3265aecc6f7e9decb045d4fcfceac2f39037bd64
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002729.fa
@@ -0,0 +1,19 @@
+>1_1438
+MTAPAVHEASQKRLLGTQHAAKTPSQTPLAAAAYGGTPVAAAADGWTIEYVTDSATSQKY
+PARFAVLTKTVGRAGCTGSTTSFGAYPSVAAMGTGRDAIVVGFDTEFVSAEEVDEQRGWV
+GEDVHVVRRIVSYQFAAIDPTDPSRLRLAVVLPQEYHGPRGPRTARLSFEKALEIAVTAL
+GLHEHPLASGWSSQGVPRAEVVDKKGETRPGWWFNGRAGVSRALPIALVAHWQQADLTTF
+VDRRKAHNTWNAAYPERARKVSTRAGLDSRRGRWLDSSTSDILRAVISASAGMVSPTPVR
+MVLAGANKRWARPVEVSIRDTMAQSGAQPLRALGEAVGVAKLDVPGDWIARMDDYLLKDP
+VAFMDYAANDAIIALEYVSQVYGDHQEVPLTLPTAAARAVKGLMSGEIEARPDTFDDFNA
+VFGGLVKVAKNVEATTGVENQLDFYKKRELQPIDGAAATWIHASAMAFRGGYNMSAELGL
+FEQVTHDLDLQSCYPTSSATIWDVDYLHPDGVILRTVNNVELGLDDFAEGGPLTPFVGFV
+SFEFPESVAFPCLPVPAEGSMIYPRTSGGARGVWAVGPEVWLALTLGAKVTCQIGHFGRT
+LRTSDGEPSRLLRGAYKTLLDDRARAKREFGKSSFQQGVLKLMANSPYGKLAQGVMGQRG
+WDAWAQERDAVGGSAITSPWHASMTTGLVRAVLLAVLNQLHDRGYATPSCTTDGFITDAE
+LSVVDGLDLFGLGQLWRDSREALTGSREMWERKHFQTDLLNVTTRANFSRQPGGVLAHGG
+YKLPEGIVPDSQEDRDHMYDLMVSRDGALPVTMKVFPSMEELTRIENRLDFAPKVVHKQQ
+TIEFDRKRRPVPEGMTAHMVMVGEQVFEVAHVRTVPWESPEDALRGRSVDQGLKRWDEEL
+GEPVWTRSPVRRTRAQWQDYFKRLERLLDEDGRVAEAERLDRIAKGIVIAHRQEVVHIPW
+LGSDRPLAERLDAFEDFGLPRPRERFWSHARSKTERQIEIDLEAIAPYVAEMKAVDPFES
+ETFLQEVA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002732.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002732.fa
new file mode 100644
index 0000000000000000000000000000000000000000..01d6cd2d697631127a4639aefb5f0616d932757a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002732.fa
@@ -0,0 +1,12 @@
+>1_1446
+MSPFPSPGRISFTKFTSPEGITDVLAGVVPGVTTAAEVLQDLAAAKLADPLWDDLLSYDP
+PFEPGKSRAAGSQVAVDNELLRACREGREDRFLLLWAQLILADPRLDAIVREVFTDSTGK
+LVPEMVNASKLGAALTARHAADPDEPHDTKAVSNLLSLLERCRLVEPVKHGKTIVGVERV
+LPTAHAVPAVVRLIGERLAERGFGAQPGRELDLALALGANAWLNLTASEFRDAFDGKTPP
+AAQPQSVPGALPEDLKVIATLLRRKGQVLLQGPPGAGKTYVARRYVDWVSAGRRADSRLQ
+SIVEALPDDRRTVPAIADEIVSRGLSAVWDIVQFHPGYEYTDFVRALVAQPHGQGVTFVA
+QHRIFSLVCAVGAELARRGYELEMVLILDELNRGDIPSIFGELLYALEYREEPVASPYTV
+DGTPSLTVPHNVRVIGTMNTADRSIAVIDYALRRRFTPIDLEASDSPIRGYTGFDDETAR
+EAALYLYERTRDALSEASQGLQVGPSYFLAEPDGEDGSIAVLATRFVYEVLPLLDEYTLE
+GEVDASRVESLRQELGLGQRAKQWDQGAALAAHLVAGQPWKPAAADPEVGEPEEALSVDL
+GGPLADGGDAPASGEDTRDQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002735.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002735.fa
new file mode 100644
index 0000000000000000000000000000000000000000..564a8f26f5b1a5540f9fc9a2eb4bd77e4d54f2ba
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002735.fa
@@ -0,0 +1,3 @@
+>1_1455
+MSTIYRTQEWSGHGKQNYFWNEYRLEGDTVVKYRCNRFKFFDGDENVWEHTEDAQESWAK
+GDPNMPDWLLQYL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002737.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002737.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3a3b98fddae68891a55998d5b9540ec19da33455
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002737.fa
@@ -0,0 +1,3 @@
+>1_1555
+MTFACGVAIAGLHVVNRRFITPMYDVVLNLAAFLAAVASSVLLGHVLPAVFAALAVLAWL
+ILAVRTVRARRAGHKSAGQRPAGAGL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002740.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002740.fa
new file mode 100644
index 0000000000000000000000000000000000000000..235610ceb45a25ef40691c77986d259bbde734dc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002740.fa
@@ -0,0 +1,21 @@
+>1_1894
+MIDAATLTKDLRALVLEVEEDLRGVLQSRPEEDAAWKSKHGILVKEEQTALSWTEFRDGR
+ITQVAVAWVLATVFVRFVEDNSLVAPVWLAGPTEGRRQEAQDAQLAYFRQHPEHTGREWI
+RQAIRHLETLPATRALVQDSAHLHLPISGRMADRIIAFWREDDPAGGLVRDFTDDRLDTR
+FLGDLYQDLSEYAQKTFALKQTPVFVEEFILDRTLEPALAERPLEGFRVIDPTCGSGHFL
+LGAFDRVADRWAAAGATADEAVDRALESVVGVDINPFATAIARFRLAVAALQRAGETSLE
+TATPRHVRVLTGDSLLHGRQRPGTGESFDAVDLQLGGFFASPEEIDELREALRSGSYDAV
+VGNPPYITVKDKALNQLYRRLYPATTKGSYALSAPFLERFFDLARPESATTPAGWTGQIT
+ANSFMKREFGTPVVEKFLPTKDLELVIDTSGAYIPGHGTPTVILVGRNAAPEGETVRAVL
+GIQGEPGRPTEASEGKVWRAIAGHVDEPGYEDPWVSVIDVPRASLATHPWSLQGGSAPQA
+MATLDEKAHATLGSLNPDIGLSVKSGMDGAYFAGIDVFRRRGFETEQVAVVIGEDVRDFS
+LINNLRTFFPYSADGTRRDPSEAARRYLWPNRAHLTNQRDFGKVKSERGLEWFEPSMFFA
+RRYTAPLSIAFAFVATHNHFVLDRGGKVFNRSAPVIKLPAGATEDDHFALLGVLNSSVAC
+FWLKQNSYPKGGDPVGDSGARVSQLPWADRYEFTSTTLKDFPLPAQMPADRARRLDALAG
+ERAALTPAALAERAVPTADALATAEAEYDRVTRQMIAEQEELDWKNYAAYGFTSEPLTFT
+GELPQVRLGERAFEIALARRVAAGEATSEWFTRHGSTPITEVPEHWPADYRALVQQRLEL
+IEADRSLNLLERPEYKRRWAAEPWDKQVDAALRTWLLDRLDVPELWRDRAGRPTPRSIAQ
+LADPLGRDADFMAVLRLWSGAEDISTVKELTRLLTDEAVPYLAALRFTESGLRKFRAWQH
+TWDLQRRQDAGEDVGHIPAPPTYSQADTRKATWWKHRGKLDVPKERFILYPDAGREGDPT
+LLLGWAGWDHAQQALALNRIVDERLAEDASAERLVPLVAGLAELQPWVEQWHAEEDPAFG
+LPLAEFTRGTLEEYRRELGVTAAQLEAWRPAPTGRGGRRKRT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002747.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002747.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e92e6ceeed9520b953bc28bac6b3b75b88ec63a2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002747.fa
@@ -0,0 +1,7 @@
+>1_1977
+MSTGLRGTQVITLGTAGGPRWWRHGGGTPRAGISTAVVVGGAVYLIDCGYGAGRQLVRAG
+YGLDDVEAVFLTHLHSDHIVDLTAIALFSTFEITQDDRDAIRLIGPGDRGALYPTSPHTT
+AAPTPLTPHDPTPGTAETLRRIVAAHATDLNERILDSLRPSPLDRIHAHDIVLPSNIAFD
+PDAEQPPAMDPFVVFEDSRVRVSAILVEHPPVAPAYGYRFDTDEGSVVVSGDTAATDNMR
+RLADRASLLLHEAIDLDWLVAKFPDPESPQAHAIRSHHERAHTSVADALRIADDAAVGSL
+ALHHLVPGTSGASLGRQLEGHHPFSSTVPSDLQVIPLASR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002754.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002754.fa
new file mode 100644
index 0000000000000000000000000000000000000000..55ba535469b0fbce1e5835acb62ed342e7984108
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002754.fa
@@ -0,0 +1,4 @@
+>2_45
+MLIVLRGNAASGKSTVALLLQDRLDRPAAILSQDHFRRSIYAECEQDSLAHADLLEAAAL
+HCLGRGHHVILDGIFHAGRYGPMLERVAAASDDARFYAFDLTFAETVRRHAMRPRAAEFS
+ADEMASWYHGWQALPFVDEHRITATEAPEQIVTRILHGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002757.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002757.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d2bd6e7a91b03c6578a9bd3543e087875cf969cc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002757.fa
@@ -0,0 +1,3 @@
+>2_69
+MKRLNVTARLAAAVLLAAGLSATPASAASPLPVSDGVVAEAGLAPVRDGGVDSGVRDGFC
+TVFPFMCDER
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002758.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002758.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2196a19fd85a3ee9062f711dd94c4d7970f06615
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002758.fa
@@ -0,0 +1,4 @@
+>2_75
+MVNRTAKRAGWDYDALAFLMGFLGAAAGGFAVAFLQLLGAEGLDAFLGLTVLFGIGPVHA
+LVAALVSPPLLAGLRRVHPRWLHVLIAGGVQAGIAAGVASLWLQNADARHLPGYVLTSGV
+LLAVAWAWALRRSAWRPAGGPADGA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002761.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002761.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5ad814f1230071ee37b3d064b43c13160352a7a7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002761.fa
@@ -0,0 +1,4 @@
+>2_157
+MDIPTRRSAVALAAAGAALLAGCAAPTPEITVVDDAGTRLFLAASPWEQREGESRGLLTG
+TLEVSEGGCLVVDDGAVGVPDHTSLPLAFPSGSTLVRESDRVTGVRAPDGATVLLGDSRG
+WTGGRVLVDDLERDARDALTQCTTEQAVFVPLAEG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002767.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002767.fa
new file mode 100644
index 0000000000000000000000000000000000000000..29c9a6a60705c78ed7c27e05af426995647b0472
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002767.fa
@@ -0,0 +1,3 @@
+>2_196
+MTRTHPAENQHASGRYLDTTARDAEDLAAVADAAAKDADAMARIAADIVAQHAEDLAGIT
+ATTADDSQAHT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002787.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002787.fa
new file mode 100644
index 0000000000000000000000000000000000000000..53c29a8e62607537639edcf38144139d8e72fc58
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002787.fa
@@ -0,0 +1,8 @@
+>2_308
+MSRHHGTLTTGALLALALTACGTTTPAPALSSTGTSSTAAPTSAATTSDSPSSSASEPAV
+GGPKTARAFGPATWAIKPEIDTIALAKAHVYGNRVLLHTATETVAYDPQGQEVWRLTRDS
+QTPPAIVPMSPTVIGLVTTGSSDNSGLAQSKPQTQVQVVDLADGSTVAEHTLDAVTNTAN
+PTAPGLSLASPDGGSEVITPDGAIRTLEDVDMAGAVGDTVITSKDEVIGTDTWSSEAFWD
+EPQYTNAAVAAANTTDLLLIEGQFGVEKTNVLVDAATGTEYARPKCGAGAFYKPMVSSPN
+GDWNVSYGAVISPDHKVTCIGGGEDEKAVDLIAVTDQGRAFGTTTEGPTLLVDARPGAEP
+TTEELAPGTVLPSGVVGGNLAVHWDPSTGVLSANPIQD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002791.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002791.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b43bc29b17ee05744643e256fcbee00678858809
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002791.fa
@@ -0,0 +1,3 @@
+>2_324
+MGFSLEMTDINVFQKANTESAVSGEELMQEIENLRTGVEALKETFKGQGATSYNNFMVAV
+NDAQNQLAEALGKINVGQADVFQAYVTQEDEQVSTNEPAVSEAQSFSFPR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002792.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002792.fa
new file mode 100644
index 0000000000000000000000000000000000000000..56217d3ad2e8074d648184ad4fe7beaf6f0e3b4d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002792.fa
@@ -0,0 +1,3 @@
+>2_325
+MDHDAQLIEAVTVRRHRLLTALTHGTNPTEQRWHGRGRLYVAGAVLAAVICALCVLVSLV
+ISILTAWLDNREQVEQQRQQQQIEQQQRQEERERAQQELDDERQVTP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002795.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002795.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2c99a81a80b6eb6c3dc856f383416bff5af0e4d2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002795.fa
@@ -0,0 +1,4 @@
+>2_334
+MAEKFGWRPNDYLENPRAFGKEDTSPAWRETWFDGTVIQDDPRHHDRQIAAKIQHLVAIE
+VTRAARLRDETLADVSKHTRMGADQFRRLMRGEGPMQVVDFATFRRVYHVDFGINPDPGL
+ANIRETKF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002799.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002799.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d97fde2ab6570e8b1bc1f8020cee228db69252c5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002799.fa
@@ -0,0 +1,6 @@
+>2_350
+MEGIRNTTHTPALGRDDARTDGGGPLSWVEGRPASERPPGGWGPSRAPADGDVPAGDRTL
+WEDGRAPGQRGRWWVWLLRHLAAAVACGAALVITAGAVMAELFAVADAAAPYGSLPLLAA
+AAAAVGWALMLVVLLALLIVGVFGGWGLGGTLFRASGPGVWSVWDGEALTEAMGAMAAAS
+TGLGRSSSESAAQATRSPRWRRFLRWTGHAVRWVLVALLVLAAGAAAVLGAMGPSPTTLV
+VWGSAAGLVVAAVLVGCGVIGLEPGPDRSPHTRW
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002802.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002802.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a4241e75697acb90425a5e244efec62c7282ea6b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002802.fa
@@ -0,0 +1,6 @@
+>2_394
+MTVDAGVLVGENGRVRGIRASSWTPERQRRVERLLRVVEAAALLLFGVCAAVLLLTEPRL
+SGTIRSVSVEGVGARLSRYGLLFAAAVITYVPRRWKWALPGYAVSALFVVGMVKMLEGAP
+SEGFPGLQVFRTDLPWLIGLLLVPQVAGVARRAGLSVRRRYASALAWTAFVEGAGAGRND
+CGCVKNRVVQNGAQETRVLLQRFDGTRRSGQVWGVVEPSECIEVDAARAVVARTDWRNAL
+SWAALDRWGRRLPGREEAQRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002803.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002803.fa
new file mode 100644
index 0000000000000000000000000000000000000000..30fb59326c1069c5c2565e9d9fb1c89cb57291fa
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002803.fa
@@ -0,0 +1,5 @@
+>2_397
+MSQRPACPYLPLPRATTLRDALVYTRASMSRLPDVVHGSLPLRRLMEAARPVLTAATSLL
+PLQDVLAAAAGAVLALSALLWAVLFLHRLLLCRGWHGHLVYTTDGRTAFLTIRSTSQGWE
+LSDHVATRSAKGDGRGLREALAPALRNAADAAGAPILVTAANRTLADLYRQEEPELREVG
+TTLLGRVRLVRPPRRAILPG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002814.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002814.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c3757ad2c263edfe40db0ea26aaf7ff545dcb4eb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002814.fa
@@ -0,0 +1,6 @@
+>2_496
+MDPRTRTRRPLLPLTTAALALALGLTGCTGGPQEAASSAAASETTSAAGDVVRGGAEIDA
+PESAEPLSNARAAAEGDDRAASARASHEAAASSEATAVPRHAVVTLPAALFETGGGGTTF
+DAWARTTDAWQADGSDPRMPDLGGWDPKTEPVVAEAVLPADQDSLRNPGVLTVPVSGPGV
+THRLVLLCEYTSPRRDEETAGVDVVAGETHAAIASSLGCTPIDVRHTVRPEHIVDGAVRY
+EFQVAPLEAGRLAVLQGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002818.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002818.fa
new file mode 100644
index 0000000000000000000000000000000000000000..52bab61167f1113267ccc04513d8ed9e432025c2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002818.fa
@@ -0,0 +1,5 @@
+>2_513
+MSSSSPALPVTALRFPEHSAPRPGVPGADAPAGPRTRGAVSWGVYLAVCAVAGLRLPAIL
+EATRDRIAAEAGADAGGGFVDLALGVTGVLAVVAFVIVFALYVSTARLLERHTLAPAPGS
+VVGAHTLALGCTLLSVHGAALLTGTLAPVPVRLGIAVAASAAAVALLRGQLPTGSAPRRV
+AAAATVLLLSALSVAF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002819.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002819.fa
new file mode 100644
index 0000000000000000000000000000000000000000..08ca42c3e2136f7d4357680c40cc4f51a23719b1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002819.fa
@@ -0,0 +1,4 @@
+>2_514
+MRLTTTHLRIALGAVGLLGLGVLATLLWGGVLPAALSSTQRGIVLTAAAVAAVAPLLGAV
+LPVTRIERPSSAVLPSLGLFGFGVLFTDALDVFPVRIIVILGGLLALAAVVAALFGGPER
+AEAAEVPERTAHRFH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002822.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002822.fa
new file mode 100644
index 0000000000000000000000000000000000000000..904a9156db8b3e102b7546567d3ecbee368fda5b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002822.fa
@@ -0,0 +1,7 @@
+>2_545
+MITSAGGTWLALLLCGLQAVLTTGTVTLVTSGVQTFTASLVSAVPADQAQLAVLNIDDAG
+VSTRLAQEVRREIDAPEDFGYRQVEAPTSAQDGPVVVVETPRQAADVLGLRKLDPQAEEG
+LRQGGALRALQAPEGELSVVDPHAADPTRVSARLATFPVIVVEGAQGSLAQGGAVILAST
+AARLPAPVSREVAHVFPRLTPEQQALAARLPQELHVNPDWMDLPKPPDTMPIPPAVTCGA
+AVLSAVDSALGVLTVTALQGVPLDLHVPWTLVGIMAGGTVLAFVGALWLALRNLSVRERM
+E
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002824.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002824.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5211cd8c7912890b13669a6b056dacb530893c3c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002824.fa
@@ -0,0 +1,4 @@
+>2_588
+MSCRCILLGSVGCAVAVGLHLLAYADLAHAGPWLLAGAALWGFMVLLGNITQAAVTARAC
+PEGTLGRVTAMRRTLTRGSVPLATLAGGALGAMLGVGWALAGWQVLAVVSLAAVVPASRW
+VDAGLDDVD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002828.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002828.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6a7056b1b61ba0ad2cab7196f99c2c4acd8db76b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002828.fa
@@ -0,0 +1,6 @@
+>2_607
+MNTDRDACAYLEEILREVTPDEEARKKAASHRASLEDWLKKDLDIIRMRETGSWHHGTAI
+SRHSDVDYFVTMRGSRPSASWSALEELRSSLALGVSSAIVRTDRPAVNLMYFDSGPSVEI
+TPAYFRDTDDYDIPDPGGTGWIQSNPAVHLDYVNDAQKKTSSRAKSLIRLVKTWKARNSV
+PLSSFYLEMRVAKYALSNPTIIYDWDLRSFFKSLEGDGLREMNDPTNYGRRISTGASSLV
+DTIAAKYDIEQAVRSSSLALKAAQDGNPSLGVAHWRRLFGG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002833.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002833.fa
new file mode 100644
index 0000000000000000000000000000000000000000..265dc4abc4ab1a915f4a039a480fe82053784e1b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002833.fa
@@ -0,0 +1,4 @@
+>2_630
+MVTRTESLTDEQWALVESLMPRPDEAGRPFRDHRMVVEGIIYRYRTGIAWRDLPSCFGPW
+QTVWKRHRRFSGDGTWDAILTALLGRADHQGLIDWEVSIDSTINRAHQHATNLPRTTGGL
+GELHETAPGAC
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002835.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002835.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1c4293e3faac4db6e9d0a3ee7e0c5f54f2fc8e75
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002835.fa
@@ -0,0 +1,3 @@
+>2_640
+MPLTPDMWWPPAVLALALFSDAAMSLRPPRFIRDCLNGVGFPREWWWTLIVIKTLAVIGL
+IAGIWIPGIALAANTGVIVYFLSAAAAHIRTRFTGQAFWLNCLGMLALSIAVLILSFAL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002837.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002837.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8475c4a62d8966b94b890363bb4582ae161e3c7f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002837.fa
@@ -0,0 +1,6 @@
+>2_643
+MSLQRVPLAAGRRHSLVVVDGGRVLAAGPPGAGECAVTGWSDVVAVAAGNVHAARNTGRS
+HSVGLRADGTVLAVGWNAHGQCDVTGWSQVVGFAAGWRRTLGVRADGTVLAAGRRDDGAC
+DVGGWSGIVAVSAGDWHSVGLRSDGTVVATGMDTRGQGDVAGWSDVVGIAAGYLHTLGVR
+EDGTVLACGDTAAGLAGARRWRGVAAVVAGSYHSLGLTQDGRVLAAGDDGHGQCSTQTWR
+DVVAIAAGSTHSLGLRSDGVILAAGNNADGQCHWALSAPGQYN
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002845.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002845.fa
new file mode 100644
index 0000000000000000000000000000000000000000..4d7210c70366b9fc2059a3aedf4b0a388b403f33
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002845.fa
@@ -0,0 +1,2 @@
+>2_684
+MKNFRPFPKYGGTKTAAITVVVGAFLLTGCTAANDSSSASRH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002847.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002847.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a83e8fd86bce7a3ca58f121232e324d4fb97ac26
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002847.fa
@@ -0,0 +1,4 @@
+>2_689
+MPRFSRLTPETAVGASRDLLGDLVERHGQVGDMVSTMAHSPAVLGGYLDLSKAMRRAKLD
+RKVSELVSIAVQSKQGCGMCLASHISAARSLGVSDDEIALAQQGTAMTSPVAAMIALGLQ
+VYREPTSITDEQIDELRGYGYSDREISDVVGVVSLNILTGAFNLVAGLTPGD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002852.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002852.fa
new file mode 100644
index 0000000000000000000000000000000000000000..fe2b24e06afbe3847323f5c1040e09f5370d4b71
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002852.fa
@@ -0,0 +1,7 @@
+>2_701
+MKAGGRLALYGAGLVVAFGGAFGLAGAVIPDSFAAAWAEGSGVNAHGEGHGDAAQETAEP
+ALNGVSASADGFVLSPVQAPTAAGEDGDLSFQILDESGEPVTEYTTAHEKDLHLIAVRTD
+GAGFQHVHPELDTSTGTWSVPWTWDEAGTYRVYADFTPAGEEAEGITLTRAIEVAGDFTP
+VETEAQPTDEVDGYTVSLNGDLTAGTSSELTISVERDGQPVTTLEPYLGAFGHLVALREG
+DLAYLHVHAEGDQPQAGDTAGPDIGFAAEAPTADRYLLYLDFQVDGQVHTAEFVIDAEHG
+DGTKTDDSHSDGH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002858.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002858.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9cc415b8b7eccba94e0239d611cfbf937f586015
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002858.fa
@@ -0,0 +1,5 @@
+>2_764
+MTGAERGGAVAAHPVPTHPEAVPGDRATLRWAVPAGLLGMVGPVGDGPAPLEALRADGTL
+RALVAEPAALRLTVGEGRTWRAEGARVRAALQEALALLAAGEATCAPEAPASVVGGPGGG
+GKARAVARAGASADSDAVLRAAVEQVLAGPAGEYLRSHGGTARILGVEDGEVELALGGTC
+HACPARGFTLQMRLEAEIRRLCPDVRAVRTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002860.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002860.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e0dc45e812a8e71e07db4ce2ba20febd423af15c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002860.fa
@@ -0,0 +1,3 @@
+>2_804
+MAPGGVGGGLTGRRGVRAVPHASDRVRAPQDLHEVDGQAYDVVFHPGGPGREGAVAAGGP
+PPVRPGLTVPPAILDR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002861.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002861.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a4bd55bf0b28cd3962dc5d121d8d7ee0e7b176b6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002861.fa
@@ -0,0 +1,13 @@
+>2_806
+MSTHPHPGDGAGIAASAAPQPAPGSPSSPAPTAPSSADRSGGHAAPGHRPATAERARTGM
+LMLAIGALGVVFGDIGTSPLYALQTLFSADHNAVTPSFAHVTGAISLVLWSLILIVTLTY
+VLNVLRADHHGEGGVLSLATLVRRHYDEATTPDSDTDVAQDAAAPGPERRRRGQWAFTAG
+LIGCSFFFGDSVITPAISVMSAVEGVAVAVPSLEHWIIPASLLILIVLYGLQRFGTGGVG
+MLFGPVMAAWFATLAVLGVGPLLDRPDILVALSPLPGLMFALQQPMVALVAMGAVVLAVT
+GAEALYADIGHFGRLPISRDWLFFVLPALALNYLGQGALILDDPGAVANPFFRLAPDWFA
+LPLTILAIAATVIASQAVITGAYSVTRQAMRLGYLPPLAVRHTSGKEAGQVYLPLVNWIL
+LAAVVLVVLMFRSSVALATAYGLAVTVTMIITTTLVLVHMATTWRRPLWQPVLLGTLVLP
+LELSFLAGNLVKVFEGGWLPLTIGGLVLGTMTVWHRGRVAVSHRWSRTEADLETFMAKAA
+HHVETGDLRRVPGHAVYLAPSARLAPAALRINLRANRGVHEKITLVHVVTEEQPYVAEAE
+RCTVREVGPLSGVHQAVIRVGFFDALDIPGTLRAHAAALGLTNRDLVQAVYVLSRSRYLT
+PRGHGPKTWGTRAFVSLSRLADQPVWQYGLPVDHTLEVGSRVRL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002864.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002864.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f3948e6a34c3c8731110599e8079f5dd1f83dbed
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002864.fa
@@ -0,0 +1,3 @@
+>2_852
+MHRTTITAPTSSRRHRSAGVAVGLAVVGLVMTACSAGKAQEPRPTTSAHVQAQGEGASRR
+SRKWREPGRWSTT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002868.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002868.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1081b0f633db34ef64f86cb4362f874bbc00de01
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002868.fa
@@ -0,0 +1,4 @@
+>2_897
+MGVGKTTAVTALSDVSVAGTDVRRSTLAFTEPAQDGKTTTTVGIDYGEWTDPEGRRIALL
+GTPGQVRFSSARDSVTARRARLVLWVFGQRPDAAFEIGRWLELLGDESVWGRTVASLALT
+PGRAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002870.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002870.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0e3add1b771949a223bf236d4a4110a4a41c39dc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002870.fa
@@ -0,0 +1,9 @@
+>2_907
+MPSHPRLRLTAGLAALALALTACGGAEQQPAAGSPAPASSSSSAAASTSPSSTASASSDE
+ADEASSSAASASESSAAASSSLGASTSAGAPSPTDGSGSWSPSAAGTPSAAGSSSASAPR
+STWSPAAPTAKPSAAPVHAAAPVEADLGGPTTGVAPADTPVAVSSTAPVVEKADPVHVAP
+AHPAAPSASQAPSTTQAPSASSSAATRTPSASASASASSAPAATAPAHTAPVPHAGVDCR
+AVKCIALTFDDGPGRSTARLLDILSAERVPATFYLVGHSAEINPSLVKRMTAEGHQVGNH
+SYDHPNLTTLSPAQIASQITRSDAAIRAAGGRPSTVRAPYGALNESVLSTFGGLPAAGNV
+TWTVDTRDWEHRNPAKTLAAVQQGATPGGIVLMHDIHATSVDAVPAVIAYLRSQGYTFVT
+VDTITGGVTPGTTVRRGMHP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002872.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002872.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c3c28b2904bc6e0ee775fb8f4407f5e868f488c2
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002872.fa
@@ -0,0 +1,3 @@
+>2_920
+MSVRQPRIYTIPCDRRGDFLDRWQSTAQPLMETLGFRFVRTWEGTPDPVHRPHCRGCWAP
+RSG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002877.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002877.fa
new file mode 100644
index 0000000000000000000000000000000000000000..f49ef9ea263ba0b9bf3d97121ff4125786247945
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002877.fa
@@ -0,0 +1,3 @@
+>2_958
+MWTHALTGLLAGLALIVAIGAQNAFVLRQGVRREHVGLVVLVCLLSDAVLIAAGTAGVGV
+LVTAVPWLLEALRWGPCCGSPLSATVLACWPRPSPARPPGGCSTA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002881.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002881.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3acce0b009cb9aac266ae969813d1adab7441f5f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002881.fa
@@ -0,0 +1,5 @@
+>2_1010
+MTIERSSAPSGGPLPRGIQHIGVTVPDLDAATRFLADGLGAKVAYDGLRPEDEPRSGPEV
+ERQLGLPAGAEIRRQRMLVIGEGPGLEMFEVSGEQRPASGLSDLGLNHISLYCDDIDGSL
+ARLVAAGGEALSEVHGNSRHEDTPGNGSVYVRAPWGMLIELQTIPGGHTYPADAEAEVWM
+PRPR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002885.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002885.fa
new file mode 100644
index 0000000000000000000000000000000000000000..d1d9e6989f2a05b7182849b0b51feef0fefdacbc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002885.fa
@@ -0,0 +1,6 @@
+>2_1155
+MSTTTTAPGRLFGYARREFVRNVRMIEGSFFIVVLPVALYLMFGALSDWGDLPVGHGNAS
+AYTMTGMAVYGAVMATTSIAGSAAVERQSGWGRQLSLTALTPGAYLAGKCLVALAMAALP
+VLAVLAAGALTGAELDGPLRWLTTGALALVSSLPFALFGLAAALLFRSEAAVSAASGILV
+VFGFLGNLFVPLSGIMLDIGRFTPVYGAGALARWPQMEGERAPMGTEPAAADPLWLPIVN
+LLAWTAVFAVVCLLASRSRTARA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002893.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002893.fa
new file mode 100644
index 0000000000000000000000000000000000000000..3b9a9076068188cbd1a8eb007b14e8cea7ddcc36
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002893.fa
@@ -0,0 +1,6 @@
+>2_1200
+MDAAQLPAFLTSGTVEDLMADAAAPAWGTRAFVEQVMGGPVSVHVRAEDPRRADIAAAVR
+RVWDLLHRIDAVLSPWRTDSDLLRMRRGELDAAAAHPWLAEVRALTDESERVTGGLFTTD
+LPAPDGSRGWDPTGLVKGWAGDLAAQVLAGVPGISYAVNAAGDVRVGVTPGGPRDPWEVG
+VEDPARPGQMAVVVSLVEGALATSGTAARGAHVMDPRVVVDGHPAPATPQLTSVSVLGPT
+LTWADAWATASLLDPGALAAAGPAWAAYRVVSRTV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002898.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002898.fa
new file mode 100644
index 0000000000000000000000000000000000000000..aa131af9eb895bf4dd5feac9983afc2459cd7002
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002898.fa
@@ -0,0 +1,9 @@
+>2_1310
+MSSRRAATAPPGSAPGGAVPVWSASRARRVVLGAQGLAGPRPAASARRVAGVAARLGVVQ
+VDSVDVLARAHLMPFHSRLEDVDPAHVAALTEGRGRRFTEAWAHEASIVPATSRAALTLL
+QGRRWPLATALPEDRRTAAAADIRALLAAHGPLTAREVRDRRASPCGPGTSWGWNWSEDK
+RVLEHLFAEGSLASAGRTASFERRYALPELLWPQGESGRAPVPPEPAAGGDARLAAALQL
+TRIALRAQGVGVADEIADHHRAPVTLTRRALEVLADRGEALEVRLDLGGTRPVPAWADPT
+ARTPRRAGACTLLNPFDPAVFHRPRVERLFGVRYRLGIYTPVDRRVRGYYPLLLLQGERL
+TAQADLGAVRRGPDPRLELRGAWSEDPAAHPGPAGPAPTPDEVADALAEEALRAARWRGL
+PRVVVPEGAPGDLTPRVRRALLERDGGRVPPGP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002904.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002904.fa
new file mode 100644
index 0000000000000000000000000000000000000000..037b42d6e1b49241c3cd19c912941276b7033adc
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002904.fa
@@ -0,0 +1,3 @@
+>2_1562
+MRAGRRSRSLTSETEAKAGSCTTKDGKSYKAFGRFADEGAWWDAERGGFVFDASFDKAFH
+DGQIWFFDVKAGTITIDAYYPLTAPNFSEERRSAPAADRAAPGGPQLTNKLT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002905.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002905.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5789f7962b86a80b9bfb393e764983b764ab2774
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002905.fa
@@ -0,0 +1,4 @@
+>2_1675
+MPRALIVVWALLIVPVLFCLVVVGGSAVAHASSSAGPATLRSALPLGAALLTAVAGTAAA
+RHARAPAARSVLTVAVALLLLAVAAPLVLSLFAAGTEEWCEGQPGGRGGAPITSEADVPL
+LCR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002911.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002911.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b8d7a55fc559b88bc01b4a69c04a0babf165c849
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002911.fa
@@ -0,0 +1,10 @@
+>2_1731
+MAVTQWPIEMAELSSLVLDPRNVRVRAGRGDGLAHADDEHAEQAIAKYMVEAEDLFDLMR
+DILRDGYLDNEIPVVVRDADKFIVAEGNRRTTALKIIANPKLLGNPMSLRVERMKARYPD
+HDSPTSIRVMIAPTWEAAQPLLARLHTGQPKKSWIREQQAIFYHAQLSDEVTVDDLRVRY
+PSEASTIPKKIRMGEMREVIRRLKYDDSSLRDFVMNSELKMTTFEYAYTPKKLHSALGLE
+FTKDGLLVSKDISDGQRRGLIYLLGRFKDKSLNTRSPELIAKNATEHEEFSKLLRGIVEG
+TPLEASTEDEGATKDHTNNQDGEPGEASGERNSAAPDDISRDEGRHRGTSETDEASTSGD
+ATASRGPNRGDTKSRLNMEGFEYQGTSPGMRRRFEELRRLDVRDFPNATHDLLRTVLECS
+IKDYFQSKGQPLPPGKTIGACIGELAREFQGNPKMTALINSINRKGRLTAEQYAGTTPSL
+NASNHELDHFAVGPDVHAAWDRIQPILKEIVGTKKQS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002914.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002914.fa
new file mode 100644
index 0000000000000000000000000000000000000000..616eb858bd7f668b865a462c9dbddc9b90821f00
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002914.fa
@@ -0,0 +1,7 @@
+>2_1740
+MPMSSASQAPAATTEPPGTPSGWIALTAIAPVVWGTTYIVTTHLLPSGHPLFAAFMRTLP
+AGLIAVMIARKLPHGEWWWKSFVLGTLNMGVFFPLLFVAAQRLPGGVAATLGAAQPIVVA
+LLASAILHERLTSWRLSWAVVGLLGVGMVVLGPGASLDPIGLMAGLGGAVSMGSGVVLSK
+KWRQPQGVGAVAFAGWQLTGGGLFLALPTLVVDGIPNGIDSRAVAGYAWLGLIGALMAYT
+IWFAGIRRLSVTPTALLGLLSPLTAAALGSLVAGEALNIIQLCGFATALTALIAGQLSPR
+ARRRVLP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002918.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002918.fa
new file mode 100644
index 0000000000000000000000000000000000000000..db6d87a4c793627c0975d7b3685f0dcede513e37
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002918.fa
@@ -0,0 +1,6 @@
+>2_1745
+MTHTTTPTTGTAAETGRGSSATPSTPHPDRADFRTSEGLRALLEHLAEHGWRNNPQAKEL
+LEFAAERFAPLARKHGLDVWEAASAAFDVMRTPAARKAADPWAVVTHAVRITCIYEERAQ
+GLMCSVHQARRAHISAHHDPERFSDRETPLYEYHPAFHLTDLHHREDAEPSEDVGASVQA
+AVADATGLFALLGWPEASARAGVDHVTNALARIGSRRGTYEALRRDKHARALLDLPAPAW
+TCLLRVLLGHPEPAYATTTAGRGILLRLLLGETLADLLGDDALVASIVRATPGRGRVRS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002921.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002921.fa
new file mode 100644
index 0000000000000000000000000000000000000000..50b3b9569067aeb48cf2ecaaeb5ade86fda1cd92
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002921.fa
@@ -0,0 +1,6 @@
+>2_1752
+MSPADRLNEGPDRPRALALLNAVLEREGFHAFYAEDNHCYLRHMGTQSVTVLAANPHRPF
+SKAEQERRKLLAAYLDSCSEDDLIEKILLPMFRQLGYHRITAAGHKDKSLEYGKDVWMRY
+TLPTQHVLYFGLQAKKGKLDASGVTKAGNANMAEIHNQALMMLAHEIFDPEVNRRVLVDH
+AFIVAGGEITKSARNWLGNALDASKRSQIMFLDRDDILNLYVVSTLPLPDEAQPSSPPNP
+WLKTDEPPF
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002922.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002922.fa
new file mode 100644
index 0000000000000000000000000000000000000000..78f5d5c13cf27846d8898693281444d6c2326733
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002922.fa
@@ -0,0 +1,10 @@
+>2_1754
+MGVCDLPVISGVCETAGEAAASLVSAPFDWLAQAMGSAAGWLFEAVWNVFDATTLVDITS
+DGYLSVYNLLFGIAVFVMLLFFCLQLITGLIRRDPTALTRAALGLAKSVLGSFVVITLTG
+LLLEVVDQLCVGIVQAAGETTESMGEKITILAGGLTAINIAAPGVGAIITIFLAGLAITS
+AAIVWLSLLVRKALLLVAIVFAPLALSGSSWDATRGWISKWAMFVVALICSKLVLVVMFL
+VAITQVAAPIDGDLSSISDPLAGVVLMAMAAFAPYLTYRFISFVGFDMYHAIGAEQDAKN
+SLNRPIPLPDRQPGNPQQVLDGNNSGNGGGGGKQPPKPSSPNPSASQGGTEAGAGTGGAA
+GSGASGSGAASGGSAAAAGPAAAAVIGVQVAKDAATAGPKAGAELGQQAETAADAADHTP
+TPNGGAGNGGNTPPAPAPGGTPPQPGTPPASTQPTPPSTPSSQPPGSSSHGGGEQVSPSA
+PVPNPPPADNPPPPSSAWKEPQA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002924.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002924.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8e03a498ba40d466ec70ddab18125eebc3be5642
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002924.fa
@@ -0,0 +1,6 @@
+>2_1760
+MATFVDPVADAAEAYEGLRGLAHATRAFEDPADTYRVLGEVSGSVRLLRQVLDQLSRAHA
+EHRDIAFTDDRVPAEAVALAAADELHQAADGLDEVADRVMRAHEASGRIAWHTHTSLEPE
+RSQRWVNVVFLQGTEADEVLELIDVQGVQAGIAHLAQWDFGDETTGAAFVNGEVYHELPA
+GQWDCTFEADGYVLTYNPQMGYVGLVREHPDTAPDPSHDGDVVAARDAFSGVTSEPSRRA
+AAGTDWFAPKAGGAAASSSVGRSL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002928.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002928.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2bf3c26d4c18737f28f1881dc9ef1163e7446bc1
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002928.fa
@@ -0,0 +1,3 @@
+>2_1766
+MVRRYRRATARVEADRPLRVRYEPREEIDAAKVAEVLIRIALRTAGDQPGGQSGAHLRRL
+LVAGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002931.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002931.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1bcdaa6c9ee0bd6f1cf5b6b524628726cf57a1aa
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002931.fa
@@ -0,0 +1,5 @@
+>2_1772
+MTTPHESHRPDPDEELLRAVLAEEEAALTEEHGRRDPISPAARTRLRGGTAGAPVPQDRP
+SVEDVYGPVDRPSVGLPGDATADGSVTGAPGAASVPAAGDGSPEVFIGADAETPADVQAG
+RRGARPQRPGPGAAAHRAGHRGAAGRRGVVPVGPPPLARDHGDREHRPVGRPPVGRRGDA
+RRGRDLGGRGAIALTR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002932.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002932.fa
new file mode 100644
index 0000000000000000000000000000000000000000..88d0cdae3539a8e1bb12958d36ffa5f114c81b49
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002932.fa
@@ -0,0 +1,3 @@
+>2_1788
+MAGRTDGVEPDEIELGAVLSALADPHRRRVIHDLVNDADGSERSCTSFGLDLSKSTRSHH
+FKVLREAGLVHQVDRGNRSEVTLRRRDLDARFPGLLDLIGSDSGD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002936.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002936.fa
new file mode 100644
index 0000000000000000000000000000000000000000..28d402d9e34b65f3d9d2b3aa628473961258ad18
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002936.fa
@@ -0,0 +1,4 @@
+>2_1816
+MNSLPLHPLMVHLPVILIPLTVLMALPAVLSRRWFQWSAPLTLAFSLAAAVGSVLTAATG
+EQLAASDGEASALLWQHAQLGEKTRNLAMLLFLLLLVWTALSWHRSPAALRRIGERIPAL
+HLVLAVLVLLVGVAEVVVAVQAGHAGAQLVWQGEGSGTQSGGGLGTGGGRP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002939.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002939.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9166c2f8105e879d7f52b042361c7caa869661ee
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002939.fa
@@ -0,0 +1,4 @@
+>2_1862
+MRRIDRIAGGRQAHLRIAPAALHHPRTRRDFRWITWILTAELVIGAAAVGIAVWLTVQGH
+PVAMSAWMRAVVVLGMTATLFYFFYFALRAAAGWRWAYQRLRLFAQVFPVITLVLAAVPG
+LYPVWMVTEQIVFSLLMIGVGDILTSDHMREAYRHPDRPVPRFE
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002942.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002942.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0015057dfb932ad5e8e2d34583cb62168fcdd5fb
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002942.fa
@@ -0,0 +1,6 @@
+>2_1899
+MKKITRSLASVAAALGLAGAGLVAAPAAQAADLTCSGIISGRTMTGDITVPGGATCTIRS
+STVTADYVYVAPNATLITENSSVSGFISVERGATLRATEGSLGDVLADSQKLIRIHGTSV
+GSLNVSQGGTVTTTRMRVRDDAYFHGMGGTVSHSWGRFSNYVSQYGSARNRFMIRSSVVG
+ADVSVQQSGHVLVGRNTVYGNIFVHDNRGTIYIEGNRADLYLSCDGNRYQPTGGNNTAWD
+KWGQCAAL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002947.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002947.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e9ea48f70834f2ce9936bdbcac79e91772ca9b19
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002947.fa
@@ -0,0 +1,3 @@
+>2_1965
+MRGGVFAEIAPREVTDEVCPPVNCLSAWETEVGRFVGFRHEGDAEYWHVVLGDEARRNDR
+VLVDFSGGKYDRDQVRHAVDVLFHDRDWT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002952.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002952.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8bc5fb407365f348ad16bf15e719da4f593c4794
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002952.fa
@@ -0,0 +1,5 @@
+>2_2121
+MDPATISGRALGAVLAVVANAPAMLPRRQPLHPRGRTRRATWRVHAAWPESGIAAFAAAG
+DTPVLARTSRAVGLPEPLPDFTGLALRFADGGALLFASTGTGPFTRRLLAPRVPGAVDPL
+TTLLPLHCRLGAVDVGAQVRGDEVGILTSLDGGPWVDRARVVLGGPADVVVRFDPLRPPV
+GLWWSDFWAAARSPAYALARRLTPGAP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002956.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002956.fa
new file mode 100644
index 0000000000000000000000000000000000000000..b4f587e88e8ae2afa3032c13ae5ddbc0e235db6d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002956.fa
@@ -0,0 +1,3 @@
+>2_2158
+MRLPRPSDYIAMMIPYITLHKPAEVAALAAKDLCLVDVGNHTASEVEESVIFHPGARISV
+AIKQSFHMSMLQEH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002962.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002962.fa
new file mode 100644
index 0000000000000000000000000000000000000000..0ed26663a4fb8c8b00d3095e975eac529c2e805f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002962.fa
@@ -0,0 +1,4 @@
+>2_2181
+MTLTLIPPTTPDEATQQLAQLQGTTVALAVLRRVQLVKAAEVGVTQQQLAGALGRAQSSI
+SEYLTRARTSLADRPATHPLWPAEVIDLYAAGLLPRDEVLAYLASYPYIDPAPTDDPAYT
+VTQPGEFGEVAAAHWNDKLSDTDYANLYDLLHADD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002963.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002963.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8514401ac72b29aedc31d6598de7d42f51c0ecf4
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002963.fa
@@ -0,0 +1,6 @@
+>2_2186
+MDVSGIPTHDGLDDAFASVGMTIPRDTPSGESITKPRRMRTAFETADSNGLKATRRLISA
+LVDELRHRDVFQHPAPEIVAAVQAVRQLITEGGATLTTDGFITTAVAFPTVDAGQRETVD
+RLIARLRRNDQDPASILGTAKDLLEATSKHVLHERAPQQRQKDMPNIVYEAMEALDLSTK
+PSSINGPSAGAIAQLHQLIARTAQAVTASRNDGGDGHGHLNPTGVSPELAEYVRVVTLAA
+TKFLLDNAT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002966.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002966.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7e42fc2d0a88a63aa63f9023ba2a93e35338d08c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002966.fa
@@ -0,0 +1,2 @@
+>2_2202
+MFDPEAIESARERLDAKQIAPEERAGQTPDVG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002967.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002967.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9ab5bbfb5f597fa546f2838d87c62a1f3b4c46ab
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002967.fa
@@ -0,0 +1,8 @@
+>2_2204
+MERRVMAPRPGWERTIASQGLVFDETVHPDGTVTHYWNESACYALTMAEVEHLEQASERL
+HAMSLEAARFLADEQSVPGSPWRALGIPREAAQLAVDSLNAGEPSLYGRFDLVYSGPDAP
+TKLLEYNADTPTGLVEAAVCQWFWKEDVFGDAVDQWNGIFEALTDRWRRIAPPEADGTPA
+RVHFAHTELDETGEDAMTVAVLRDAAEQAGVRGESLLMSQIGFDTERLRFVGADLRYLRR
+IFKLYPWEDMVTERFGPRLKLDDEVRWIEPPWKMLLSTKALTAALWHLYPGHELLLPTFL
+NDRGGLREWVRKPLHGREGAGIEIRSRAGDVSSAAGRWGAEGHVYQQFHGLPDFPAPDGA
+PNRPVLGTWMVGDECFGVGIRESDGPVTDALCRFVPNIIDG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002972.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002972.fa
new file mode 100644
index 0000000000000000000000000000000000000000..84f5adb1316c2330d57fdcbb136efbf1312829f7
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002972.fa
@@ -0,0 +1,2 @@
+>2_2252
+MDRPRRPGLTPTPSPDGAAAEEHGVTGLASHVPSQMTPAILGAADLILAATG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002973.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002973.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c4a43693de1cdc255919fce9088e1381024eba2c
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002973.fa
@@ -0,0 +1,6 @@
+>2_2265
+MESTPPVPPLPDGRVGIVIPVYNTGSLALGAAHSARVALGSTENVVVVDDGSKHPDTLAV
+LDSLRVEGFHVIRQPNGGVSSARNTGIQQVTTPYVIALDSDDEIMPEAPHAMAEILDRHS
+DVTIVTGGAFEVVDGAEHLSSPPDGPVTRSAMRAATVLAMASMFRRSDWEAVGGFPEGLS
+VGEDWVFWMRLLRTGGKVEILDIPIARRHLGEHQVTRGYIDPRQSTQAAALVRSENSDLY
+AGQEVELIERLNAAELQLAAYRHAYRHVDRFKAGIRSLLGRARAKR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002975.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002975.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c3fc66e1cf54758156f2f702f7c03ae27b436bd0
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002975.fa
@@ -0,0 +1,4 @@
+>2_2365
+MSDCEPCDLQSVPAMTDTAPALDVDALAADPVEQFHRWIRQVVGSGVPEATTVTFATVDA
+REQPDARTVLRAVRVRGGVRDAPLPEGARMRTVRPERVEFWQGSPEDHRHVRIVYTADDV
+GGFRGEVTRG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002976.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002976.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c6f0231e838dc9a8ab7917666f3f5ea12160d449
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002976.fa
@@ -0,0 +1,4 @@
+>2_2367
+MTQPAPGPPAPWPASGGPGLAPAPWPGPDWQRAHDQAIVFGILAVTTGMLGLVFGPLALN
+QANRARAIGPDVGVARVLAWIGIGLAALSLLFLLGYFLFFGVMMAEMLRQLSQLSSGGTF
+AALGAV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002979.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002979.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6a4fcef9496889913edc094983ef456063aa8e19
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002979.fa
@@ -0,0 +1,2 @@
+>2_2429
+MTVNLVKLHVSQLNGCAPCLRLHPREAAAGGWESGCVSAEAGAALALAEDVTHL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002985.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002985.fa
new file mode 100644
index 0000000000000000000000000000000000000000..496aacec8efa39c3ceff60828f66d4b4abca4181
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002985.fa
@@ -0,0 +1,3 @@
+>3_78
+MAGGPLGVFLAAHLRRAKRRFGLRWILTLALWCLFWVLGLLMGEARPWAGAVTAVGIMTV
+TVGGAVWELRR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002986.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002986.fa
new file mode 100644
index 0000000000000000000000000000000000000000..a9fcbb9f380c43d72c41ddc0d7432dd47d26a388
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002986.fa
@@ -0,0 +1,3 @@
+>3_85
+MSSSPQTMLSGSFFPISRFRLISATVLLIMSIVALTPWSFETRIGGMALINILLTAVMLY
+GLVVLIIDLMVTRETAAARTVSTEERHD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002988.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002988.fa
new file mode 100644
index 0000000000000000000000000000000000000000..67d9716a315111c7eb34448e1f964bd54cbef098
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002988.fa
@@ -0,0 +1,2 @@
+>3_196
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diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002989.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002989.fa
new file mode 100644
index 0000000000000000000000000000000000000000..1f48dd56a9efb3219ad3e6805a091d50bffbe5c8
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002989.fa
@@ -0,0 +1,4 @@
+>3_220
+MDILHSARRLKHRLWLAQKHGAHVVTEGRDLIYRMSSAVSPARYDAARYELDFTALTGRN
+TSWKPDRPIPRVVWCVWSGTNAMSANRAACLQSIREVQHDLDVRLVTPDTLHEVVVNGHP
+LHPSYEHLSDVHR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002993.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002993.fa
new file mode 100644
index 0000000000000000000000000000000000000000..782846a1dc2d4d96b82d9d20446ae0352ecf2b13
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002993.fa
@@ -0,0 +1,5 @@
+>3_346
+MVLELRGEPDRTGLRFFRLKSHTACMETKPNATRTVLPPADLEEMLDLSRFLGALTQPAA
+LLGPDGQTVPLPLEAFNVLREVVEAMQVGKAITVAPVDQMLTTQEAANFLGISRPTLVKL
+LEGGELAHELTSGGRHRRVRLQDVVQYQEAKRRDRRAALEDLTGSASEAGLYDEDADRYR
+QALRQARRDLGRQAR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002994.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002994.fa
new file mode 100644
index 0000000000000000000000000000000000000000..74d61d7e9984e8d35d9a71bdba8c0e0d4efe0cc6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002994.fa
@@ -0,0 +1,3 @@
+>3_347
+MARFSAVLDACVLVPIAQADTLLYMAEAGLYRPLWSERILEETIRALETIHPDMRETGAA
+RRRAAVMNQAFDDACV
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002997.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002997.fa
new file mode 100644
index 0000000000000000000000000000000000000000..93579baee021f4221cdf19ad5c908d862a3b7f1a
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0002997.fa
@@ -0,0 +1,3 @@
+>3_359
+MVARCLVDADQGSQFRSGLLQDALTRHGLIGTMGQVGPAGDNAAMESFFALLQKSVIDRG
+RWATRDESIMDPTPAHAA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003000.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003000.fa
new file mode 100644
index 0000000000000000000000000000000000000000..941acdad2a388771fb59ae4c32b4bcf0c1e9299b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003000.fa
@@ -0,0 +1,7 @@
+>3_1067
+MLHLLVDTSTWLDLSKRRDGQRWIVALRVLVHQGEVELIVPPLVIDEYERNRERVEASMT
+ASVAQRFKLIRQDLDDYGGTDTEQALSTIEDLARHAPLIGAMTTRNFDEVLELLRGGRTV
+EPTESERHAVVERGLVKQAPFHRSRNSIADALLIELYASAVAGVDLAREPHAFVTSNSED
+FSLPHGDKRQPHPDIAATFALGGSTYALGVDGLNEVLLAHFGPEIEALFADTDFVEEPRR
+LDEIVEAETRLFDRVWYHRSLQHEYRLQDANNHVEIEQLRAIAGPGRKRVEETCNLPGEL
+GPYTDFELGMLNGKLSALRWVLGSEWDFLDT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003001.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003001.fa
new file mode 100644
index 0000000000000000000000000000000000000000..02757ce0d983cf42fa71641d772793810ecc5269
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003001.fa
@@ -0,0 +1,3 @@
+>3_1069
+MTTPTQFLRSKYRAIEGGCVTCAGDLAVVESLPGVKEVDALASGLVLVTHDGTVSDDAVV
+AAAKKSGLPLVAAGPARPVRA
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003004.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003004.fa
new file mode 100644
index 0000000000000000000000000000000000000000..64960c0d1ddba65c3005a9e4abc9fc2aa1aa5cb6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003004.fa
@@ -0,0 +1,10 @@
+>3_1285
+MGQKQKTKSFQLGEIPSSSDAWWNLFNFAAEAQWEIPGVSLESFANPESIFLRSAAEISL
+NQPTRLRLEHGGFHFAVRLADNSSVPIDIDADIIPNEYILSSYEYEYSTKNFTYRGYKAQ
+RTSPADLTVILGHELTIDLKEVGSDNGKCDIKYPLSRYLAHRVRDLELYIDILEYGFLTI
+GSYGIQVDTTAVSDVHIQEDKEYLETLRNLLQNIEYFGGNAEKVLVDSINDDQVRAIQAA
+VESSRSHQRPPGYRGSTGRVRFGVGDKSLELFVYARDDEGQIDVTNLFGDDNGFWLASTE
+TVDGGESSRLVTPYEFIDDEDLVGLININLSSISRHYERIKGYDGVEQIADSMIIRLWRV
+AVKQEDRREEFRSAALSLALWVSCAYVNSTQRLRYLTNIHLLRFWANGFAWSDDSQRLAC
+RRLQQDVMRANLSDISLYHVCLTFLLGSEVDLGDTIQGLNENEMKQLQSWPVWDLIGEAY
+PKLTAT
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003011.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003011.fa
new file mode 100644
index 0000000000000000000000000000000000000000..91d01d0ec6362870866f89db1fcf01ab3d9f2d42
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003011.fa
@@ -0,0 +1,2 @@
+>3_1884
+MTLAELEEGQVLVTSTVMSVGPCMGGHMNDVASDVAPFEVDAPSTAAGSAP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003012.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003012.fa
new file mode 100644
index 0000000000000000000000000000000000000000..688c4edc2a7a4b4872370df83102b8ea91ff118d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003012.fa
@@ -0,0 +1,3 @@
+>3_1885
+MKYSFQANEANGAPQQAVLNGWHTNDLLGIQAKIAGDQRDQSHRLTALVFFLGLGLLGDL
+VLRNAEAFRESKGS
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003013.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003013.fa
new file mode 100644
index 0000000000000000000000000000000000000000..22bb3a486ee5e07bef391fa650a32f5dde854b71
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003013.fa
@@ -0,0 +1,2 @@
+>3_1886
+MKDRKNPTSIAKAHQKRATGQFTRNFPPRDFFTFPFFDADPGAPPGWKPCPH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003015.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003015.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9e1002e2e319c02386384c94ff2487b2e8840f57
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003015.fa
@@ -0,0 +1,11 @@
+>3_1922
+MSKFHVDQIATRIRELYSTDYWDANLSDVNNLSRLLARYAVDLTIPESSDSGNQRIVEVI
+DGGEDRGIDAIGIDFVSQLVVLVQSKWRQDGSGTMDLAGLLKFRRGVETLLGIRTDNVPV
+SASPEMRMAVSDILKKPGTRMRFIAVTTAQEELPTQQQESMNELLSSVNEGGASEPIASF
+VHLGQGALFDSIVEREPMDLDLNMQIFNWGKIDEPRRMVYGRVDAAQIAQWYRDHEHKLF
+AENIRLVIPRSDINDGIRKTLTSEPENFAYFNNGITMVVRDMQVAPAGSATREAGYFTAK
+GVSIVNGAQTVSTIGRISKSEGSLDFLEAASVMIRCIVVSDEEAEFGRLVTRYANTQNDV
+STQDFAFLDAEQHRLKSEIKVMGFEYLLRSGEDVLTESSDKRIDVRSAAIALACAHRDVE
+LSVLVKREISQLFSDRYRTIFNPSTDPRLLVSSVLVNQVVENKLGELEPLTEGVKNGVII
+HGKRVISHLILRGIGTTNLSSSEFAIENYDSWIEDECERIVAALVENFPDNSYPGNVFKN
+TIRVRALLNESSLL
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003017.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003017.fa
new file mode 100644
index 0000000000000000000000000000000000000000..7fe9118af02788c7425b7979e56003080737a521
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003017.fa
@@ -0,0 +1,3 @@
+>3_1975
+MKDRGRLLGIAAISVTSLLWGTTGTAATFAPDAGPLAIGAAALGIGGLLQAAIAIPALRR
+A
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003020.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003020.fa
new file mode 100644
index 0000000000000000000000000000000000000000..9c3e4695f5a57ba44381810762ca5b3ece4ecb8b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003020.fa
@@ -0,0 +1,4 @@
+>3_2128
+MFGAYADRVGRKRSLFAAMMITALGSLIIAFTPTYGTVGVLASVILVIARLLQGLAHGGE
+MGTSVTYLVERAPQGRRGLFGATSWVSVVVGTILATLVGLAVNTLLSHEQVASWGWRVAF
+GIGGVLGLYALYLRRSLTESEHFTAAQ
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003021.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003021.fa
new file mode 100644
index 0000000000000000000000000000000000000000..5e66350ffab3ae440a81d4306a05ded8d6e8956d
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003021.fa
@@ -0,0 +1,4 @@
+>3_2157
+MPPDGCRRRGGFICGERRHSDLYKWAYKLVPVVDSDLLADCFDLAWDIRRLDMEASPYDL
+TGVDDLSDGCGGYAAVRIEEPTGRAEYARRQREFAARGQALRVRLLAVLDEAVGAAPGTG
+PDAEWTSSARP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003028.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003028.fa
new file mode 100644
index 0000000000000000000000000000000000000000..6de548bad4a59869f7083dc6e7cce1f7c3ef4cc3
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003028.fa
@@ -0,0 +1,4 @@
+>3_2165
+MTGPSTDGVRGGRQTWAQWYYSGAPTAQDMADRRHADTARAERARLDAEALNARHAEPRP
+DPAARLRIALTNLGPSMVPPGAGPTLADVNAAIRREAGPDRALHQQMLDLHFTQQARRRA
+AGNH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003035.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003035.fa
new file mode 100644
index 0000000000000000000000000000000000000000..e85efde37832f5d6a95ca697a2cc7cb9cca1100f
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003035.fa
@@ -0,0 +1,4 @@
+>4_107
+MDFWSTIWDAIWWFFTIFVFVAYLIALFSIISDLFRDRELSGVYKAIWLLFLIFLPFLTA
+LVYLIFRGRGMGDRAERQTREAKATADDYIRTVAGGPASEIAQAKQLLDSGTISEAEFQS
+LKQSALDGSR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003038.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003038.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2425b957cf3539ccfac087831c89a67ba0423803
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003038.fa
@@ -0,0 +1,7 @@
+>4_113
+MMSAEGPKRRELFRWWEWALIALAVISIPAGPGALIFLMPVLPRIVLLIRKHRYFNSEEF
+QEKKAEIRAFVAEHNELKEYIDEIRARGSFSLGESSTGQHAHLAYSENTSRHNYIRDRNV
+ATLGAPNVHNCSLQVVRKAQMDPIRYLMKYFHINAEEDRLAEVEEMGSSLAQLEEALSNL
+QNREASITEAIQPPSFIQKHFLDEFMEQVGVEISPITIPYEIYTFEYVSAGGNSSERTNV
+VLNSQALDALIDTMSARIKFRKSAAGQRALMTSKLRHHIKDRDNFTCQNCGVSTYAEPHL
+LLEVDHIIPVSRGGLTTEENLQALCWKCNRSKSNKI
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003042.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003042.fa
new file mode 100644
index 0000000000000000000000000000000000000000..ca79912ed47e608dcf89849b2a878e687d7c068b
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003042.fa
@@ -0,0 +1,3 @@
+>4_157
+MIFIVVKFTVKPDWSDRWLDLTSSFTRDTRHEPGNLWFEWSRSVENPNEFILVEAFEDDA
+AEAHVNSEHFQNAMQQMRQALVETPRIISRQIEGNTWDRMGELAID
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003047.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003047.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2d537c9f69d349f83492dbc9f19733815cd93935
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003047.fa
@@ -0,0 +1,5 @@
+>4_858
+MKSVLHTRTAIAAALLLGLTACGDTASPAEEDAPAAAGSSTASAPAGAEEETEADEPEQQ
+AGGTAGTREDPLPLGTPIEGEDWVVTVNEVTPDATDAVMAANQFNDAPAEGTQYLLADVT
+VEYTGDESEMIMLGTGFAFVTATGETIDAGDAFAVGPEELDTAQELYNGGTAQGNVVLQV
+PEGADGLLRVTTGMFGGEKTFVALD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003048.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003048.fa
new file mode 100644
index 0000000000000000000000000000000000000000..2a45e7f22f2721aa691de2177030a3c025d5f7ac
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003048.fa
@@ -0,0 +1,3 @@
+>4_970
+MALDIRTHLRARGIKAVIPEPADQQGHRRRRGARGGRPIGLDAAAYKGRNVIERQYAHLK
+QWRGLATRYDKYAIIYRAAVVLNAVIAWSKRLSDMP
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003053.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003053.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c3f6be85c9c56633708c30ed831cf160a4b46069
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003053.fa
@@ -0,0 +1,9 @@
+>4_1491
+MSEGLALKCLAALLGSDAAHANLKYFRANPGIAVSELGPDAKDINSIAEQTEADGLFIIE
+DVAICVEVKAKSISSHARRGHVQRLSADLRETVGSATEQALRLENHIRTNHGLWLENREW
+LDLSEIREIRSVTVYLDDFGPLSTALDELVRAKVVGSDRFPWLVTLHDLIVIAEVIDRPA
+EFLLYLRRRTESEVSLKFSAVDELDLFMLFLSGGLWVEPDPDRVSEEFLGVAPPTVKERR
+RYQESAVPTRVMTQTDELDAWVYFNEGASDVEAEKPSFGVLPGIARIVDFLQDGRKPGWF
+RFSADLLNLDEESQESLGDMVEHLVSITRQDGLHHNSIMAFAGSWGYPTLFMGSKPRKMS
+IQEASTRLAAYGCAKKHQIRSDRALMVVFDEEQRIRSIRYDNSPPVENRELDGFVAEMGL
+IPPSVMGRPIPPSARRTTVRLNPSRKRKKRGKRGR
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003056.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003056.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c8bc982adb33d61b133c9aff596332dbd33c6fe5
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003056.fa
@@ -0,0 +1,10 @@
+>4_1739
+MLILSSRMRPKEQFEGYAFVGTDYVHGPAGMTAYRARTGRTVGPGEDGCYVVARRAGRLF
+GRRFEVGTDASGLGRLFLYRSGDDWALGSSYSGLVEHLRTEGMTLTPRLGRLRPFALRQT
+LTMQLSIFQTPFDEIRLLPVGTVVVIRGSVLSLERAPELQPLEYEAALQEYLDVWRGRTR
+ALLADPRVTFTADLSGGVDSRTVFAFLLESGLFRTDSDRFWLHSGVNQKEDLAVAKGIAE
+AHGLTVNGPKPPTRTLVSGSRAYRHWRENSLGVYTPVYMSSTFQNPFEVHAHGGGGGTIK
+QYYRHAEPLRLLEPFKEKMPAADFALWQEEMATTQEQLKQTAPGVVPSIQHYLEFRNRFH
+FGHIPKARPLFMPLNSKYAIRALTSLPQDVRRRFYFDVMESLAPGLKDVDYDNARKAPTA
+QELESLLVLPASDRLAAGTAYGDDTVETADPDDPLSAGFQRWLQDIDRAAARPEVRRFIM
+GRAMARTDRTVEALRALGKPFHSHSGHSVALSHLLMVDFTLGD
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003063.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003063.fa
new file mode 100644
index 0000000000000000000000000000000000000000..93d888620c47e2754cf21cf2eff43fea7516dff6
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003063.fa
@@ -0,0 +1,3 @@
+>4_2122
+MAKHLLETDGQVCPFPLVEANQAMQQIPSGDELVIDFDCTQATDSLPRWAAENGHEVTDF
+VKRGAAEWTITVKKG
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003065.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003065.fa
new file mode 100644
index 0000000000000000000000000000000000000000..20b15ee64bd6403243ab7825bdfd61bb1d677ac9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/Sequences_ids/OG0003065.fa
@@ -0,0 +1,6 @@
+>4_2149
+MTTPSGAPDVSADPEVRLLTARLNRARTHYLDFAELWAAYLEGRPHSIAREILTDGTVTI
+RLDRVAPIPAELSILLGEFLYEMRAALDNCLYAAAVIASGQNPPPGAERLEWPIRTDQTQ
+WKSQANRYKHLPAELTEALEAIQPYNAELPAWNCLAILHGLARFDRHRRPWPLALFLVKT
+QLQVRPDVVEPLDVACNRVIHPGEKLATLRLSPGHVLSPTNFDFHVEFDVDLADIEPSEG
+PEGLHVRPWGSLAHRLQSVHRAVTEYCDDLLLLAASCRKH
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/SimpleTest.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/SimpleTest.fa
new file mode 100644
index 0000000000000000000000000000000000000000..c0fe89cfc25f45694a7b5bcc4810f31006cd24d9
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/SimpleTest.fa
@@ -0,0 +1,4 @@
+>a
+A
+>b
+A
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/Species0.fa b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/Species0.fa
new file mode 100644
index 0000000000000000000000000000000000000000..8212909ce82d41e5b0fca1f922a0f44eac5a8121
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/Species0.fa
@@ -0,0 +1,8 @@
+>A
+MSKVIELKGIYAKYNKKSDYILEDLNLNVESGEFIAIIGPSGVGKSTLFKVIVNALEISKGSVRLFGQNI
+>B
+MLKLLSKFPLKVKLMALFAVILSTLHPFLSILIPTVTRQLITYLANSNINSEVSVYIFKSSWIIGSFSYA
+>C
+MQITVKDLVHTFLAKTPYELNAIDNINVTIKQGEFVGVIGQTGSGKTTFIEHLNALLLPSAGSVEWVFEN
+>D
+MIKVTDLMFKYPSAQANAIEKLNLEIESGKYVAILGHNGSGKSTFSKLLVALYKPADGKIELDGTTISKE
\ No newline at end of file
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/Species0.fa.output.txt b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/Species0.fa.output.txt
new file mode 100644
index 0000000000000000000000000000000000000000..485ff985b807ced95e8661209b7fef3cd8f0a556
--- /dev/null
+++ b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/Species0.fa.output.txt
@@ -0,0 +1 @@
+(B:2.789646230,C:3.934614000,(A:0.000000007,D:4.374925289)0.926:3.758208506);
diff --git a/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/diamondDBSpecies0.dmnd b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/diamondDBSpecies0.dmnd
new file mode 100644
index 0000000000000000000000000000000000000000..ba6d89f3f3a0b51535c60cabbf49be309e60dafd
Binary files /dev/null and b/Biomanus/experiments/ablation/results/biomanus/bioagentbench/comparative-genomics_20260522_115630/orthofinder_output/results/Results_May22/WorkingDirectory/dependencies/diamondDBSpecies0.dmnd differ