#!/usr/bin/env python3 """Enrich an existing H5AD with full annotations without recalculating X or raw arrays.""" from __future__ import annotations import argparse from pathlib import Path from drmhb_workflow import enrich_existing, positive_int def main() -> None: parser = argparse.ArgumentParser(description=__doc__) parser.add_argument("source", type=Path, help="Existing package-generated H5AD") parser.add_argument( "vibframe", type=Path, help="The original matching VibFrame ZIP/directory" ) parser.add_argument("output", type=Path) parser.add_argument("--max-sidecar-mib", type=positive_int, default=512) parser.add_argument("--overwrite", action="store_true") args = parser.parse_args() print("A transactional copy needs about one additional H5AD of free disk space.") result = enrich_existing( args.source, args.vibframe, args.output, max_sidecar_mib=args.max_sidecar_mib, overwrite=args.overwrite, ) print(f"Created: {result}") print( "Source identities must match. Legacy capture_t companions are not retroactively added." ) if __name__ == "__main__": main()